RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134121

Ensembl transcript IDs: ENST00000256509.7, ENST00000397491.6, ENST00000421198.5, ENST00000427688.5, ENST00000445697.1, ENST00000449294.6, ENST00000453040.5, ENST00000470005.1, ENST00000471332.1, ENST00000481167.5, ENST00000486881.1, ENST00000489224.5, ENST00000620033.4

Found 777 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTGCTCCTCCGGCCCGTGGTTTTTCGCAGGAGTTCCCCGGCCCTaGCCCTGGCTGAGACACTGTGGCTCGCAGCGAGCCCGGAGAGTG +
Preference number: 1 (lower is better)
Translates to: CCSSGPWFFAGVPRP*PWLRHCGSQRARRV
Trigger: CACTCTCCGGGCTCGCTGCGAGCCACAGTGTCTCAGCCAGGGGCAGGGCCGGGGAACTCCTGCGAAAAACCACGGGCCGGAGGAGCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 90 bp TCCCGATACCTTTACTCCCTTCTCCTAAGGTGGAGCTTTCCTCCGTaGTCGGTTTTCCACAGCCCTGTGAAGTGCAAGCCCTCAAGTAGA +
Preference number: 1 (lower is better)
Translates to: SRYLYSLLLRWSFPP*SVFHSPVKCKPSSR
Trigger: TCTACTTGAGGGCTTGCACTTCACAGGGCTGTGGAAAACCGATCACGGAGGAAAGCTCCACCTTAGGAGAAGGGAGTAAAGGTATCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR GCA 90 bp GAGGTTCTCCTTCAGCCTCACATAACAAGATGCCATTGCTTCCGGTaGTATACACAGCACTCTGAGGCTTCTTTGTCCAGCGAGGAGGCT +
Preference number: 1 (lower is better)
Translates to: EVLLQPHITRCHCFR*YTQHSEASLSSEEA
Trigger: AGCCTCCTCGCTGGACAAAGAAGCCTCAGAGTGCTGTGTATAGCACCGGAAGCAATGGCATCTTGTTATGTGAGGCTGAAGGAGAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 90 bp AACTGGAACCTTAGAAATCGGAGGAGGATGGAGCTCGAGTTGCACTaGTGGATGTCTACATCCTCACATTCACACAGGGTAGGGACCACA +
Preference number: 1 (lower is better)
Translates to: NWNLRNRRRMELELH*WMSTSSHSHRVGTT
Trigger: TGTGGTCCCTACCCTGTGTGAATGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTTCTAAGGTTCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR GCA 90 bp TTGTGGGTTGAGGTTCTCCTTCAGCCTCACATAACAAGATGCCATTaGTTCCGGTGCTATACACAGCACTCTGAGGCTTCTTTGTCCAGC +
Preference number: 1 (lower is better)
Translates to: LWVEVLLQPHITRCH*FRCYTQHSEASLSS
Trigger: GCTGGACAAAGAAGCCTCAGAGTGCTGTGTATAGCACCGGAAGCAATGGCATCTTGTTATGTGAGGCTGAAGGAGAACCTCAACCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 90 bp CTACCCAACATGAGTAAGACCCAGCATCTTCTTCGGTGGTTCTGTTaGTCTGCAATGTGCCATTTTCATAGATATGATACCGCCTGCCCT +
Preference number: 1 (lower is better)
Translates to: LPNMSKTQHLLRWFC*SAMCHFHRYDTACP
Trigger: AGGGCAGGCGGTATCATATCTATGAAAATGGCACATTGCAGATCAACAGAACCACCGAAGAAGATGCTGGGTCTTACTCATGTTGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CCA 90 bp CTCACAAATGGAGCCAAAGGTAAGATAACTGTGGTTTTCTTTCCTTaGACTCTGGTCAGTTCCTCCCACCTTCCAGGCTCTTCTTTGTTT +
Preference number: 1 (lower is better)
Translates to: LTNGAKGKITVVFFP*TLVSSSHLPGSSLF
Trigger: AAACAAAGAAGAGCCTGGAAGGTGGGAGGAACTGACCAGAGTCCAAGGAAAGAAAACCACAGTTATCTTACCTTTGGCTCCATTTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CCA 90 bp CTAATTCAATATTCATCCAATAAATGTGTAAAGGTGGGAGGCCTTTaGGAGGATTGCATGGGAGGACAATTGGATCTCCCTCCTCCACTT +
Preference number: 1 (lower is better)
Translates to: LIQYSSNKCVKVGGL*EDCMGGQLDLPPPL
Trigger: AAGTGGAGGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTTACACATTTATTGGATGAATATTGAATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 90 bp ATTGGCTGTGACTGCAGTTTTTCCTATAGCATTTTCTACCCAACATaGGTAAGACCCAGCATCTTCTTCGGTGGTTCTGTTGATCTGCAA +
Preference number: 1 (lower is better)
Translates to: IGCDCSFSYSIFYPT*VRPSIFFGGSVDLQ
Trigger: TTGCAGATCAACAGAACCACCGAAGAAGATGCTGGGTCTTACTCATGTTGGGTAGAAAATGCTATAGGAAAAACTGCAGTCACAGCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 90 bp CACAACATCAATATTGGCATTGGCAAGGATAGTTCCATGGACATTTaGGGCTTCACACTGGTACACAGCAGTATGATTTGGTTGAAGGTT +
Preference number: 1 (lower is better)
Translates to: HNINIGIGKDSSMDI*GFTLVHSSMIWLKV
Trigger: AACCTTCAACCAAATCATACTGCTGTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACTATCCTTGCCAATGCCAATATTGATGTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CCA 90 bp CTAATGTTTATGTACAAAATCAGTGCTGGAACCAGGAAGAGAATTTaGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCA +
Preference number: 1 (lower is better)
Translates to: LMFMYKISAGTRKRI*IFPTLGQFSRNSCP
Trigger: TGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCAAATTCTCTTCCTGGTTCCAGCACTGATTTTGTACATAAACATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR TCA 90 bp TTGAAAGTGAGATATGTGCCCCTCGTTTGGGATCCTGAATGTTCCTaGATTGTTCGATGGAATTATCCGATGGTCAGTGAAATAAAAAGG +
Preference number: 1 (lower is better)
Translates to: LKVRYVPLVWDPECS*IVRWNYPMVSEIKR
Trigger: CCTTTTTATTTCACTGACCATCGGATAATTCCATCGAACAATTCAGGAACATTCAGGATCCCAAACGAGGGGCACATATCTCACTTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CCA 90 bp CGACTGTCCTTTTCTTCCACGTTTGCGAAGTATAGATCTCCCTTTTaGCTCATGTATACTCTTTCATCTTGTTCGATGTGTTCTAATTCA +
Preference number: 1 (lower is better)
Translates to: RLSFSSTFAKYRSPF*LMYTLSSCSMCSNS
Trigger: TGAATTAGAACACATCGAACAAGATGAAAGAGTATACATGAGCCAAAAGGGAGATCTATACTTCGCAAACGTGGAAGAAAAGGACAGTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR GCA 90 bp ATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTaGTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTA +
Preference number: 1 (lower is better)
Translates to: MKSSASMFLFLYESS*SFEQINMEGWGEPV
Trigger: TACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR GCA 90 bp CAAAGTTTTAAATATTGGCTGTTGACTTATCACGAGTGGGCAATTTaGAAACAAGCATCACCAATTTATAATTACCATTGCACGCCGTGG +
Preference number: 1 (lower is better)
Translates to: QSFKYWLLTYHEWAI*KQASPIYNYHCTPW
Trigger: CCACGGCGTGCAATGGTAATTATAAATTGGTGATGCTTGTTTGCAAATTGCCCACTCGTGATAAGTCAACAGCCAATATTTAAAACTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR TCA 90 bp ATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACTaGATGGGGACTTTGGATTTAGTTGAGGTGTATCTAAATGCAGGA +
Preference number: 1 (lower is better)
Translates to: MQTHRIVKSGKYGIY*MGTLDLVEVYLNAG
Trigger: TCCTGCATTTAGATACACCTCAACTAAATCCAAAGTCCCCATTCAGTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR TCA 90 bp TCATATAAACCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTaGAAAATGCTATCATTATCGCCCCAATTCTTAGTCATTAGGCGA +
Preference number: 1 (lower is better)
Translates to: SYKPAYSLPLVSITS*KMLSLSPQFLVIRR
Trigger: TCGCCTAATGACTAAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGGTTTATATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 90 bp AAGTACTACTCTTTTCAACATAATTGCAGGATGTTGACTTCTGGATaGAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTT +
Preference number: 1 (lower is better)
Translates to: KYYSFQHNCRMLTSG*NLRPACFYSYMKVL
Trigger: AAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAAGTCAACATCCTGCAATTATGTTGAAAAGAGTAGTACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR-3UTR TCA 90 bp AAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCCCTCCGGCCCTGCCCCTGGCTaGGACACTGTGGCTCGCAGC +
Preference number: 2 (lower is better)
Translates to: KGGRPLGGLHGRTIGSPSGPAPG*DTVARS
Trigger: GCTGCGAGCCACAGTGTCTCAGCCAGGGGCAGGGCC...GGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR GCA 90 bp TTTGTGGATTCCTATCTGGAGCTGCTGGTGGTGTTTCATGATGGTCTGACGGCTGGCCCGCGCGGCTGCTaGTCCTCCGGCCCGTGGTTT +
Preference number: 2 (lower is better)
Translates to: FVDSYLELLVVFHDGLTAGPRGC*SSGPWF
Trigger: AAACCACGGGCCGGAGGAGCAGCAGCCGCGCGGGCC...AGCCGTCAGACCATCATGAAACACCACCAGCAGCTCCAGATAGGAATCCACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp AAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCCCTCCGCAGTTTACAGCACCTaGGCCCGCGCGGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: KGGRPLGGLHGRTIGSPSAVYST*ARAAAA
Trigger: AGCAGCAGCCGCGCGGGCCCAGGTGCTGTAAACTGC...GGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp CCCTACTTCGTTCACGGCTATGACCCTGAACTGGTATCTCACAAATGGAGCCAAAGCGAGCCCGGAGAGTaGGAACGGAGGGGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: PYFVHGYDPELVSHKWSQSEPGE*ERRGWL
Trigger: AAGCCAGCCCCTCCGTTCCCACTCTCCGGGCTCGCT...TTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp GGTAAGTCACCACCAATTTTGTTCCAATCAACCTGTGGAGTTGGCAAGCCTTCACCCCGGCCCTGCCCCTaGCTGAGACACTGTGGCTCG +
Preference number: 2 (lower is better)
Translates to: GKSPPILFQSTCGVGKPSPRPCP*LRHCGS
Trigger: CGAGCCACAGTGTCTCAGCCAGGGGCAGGGCCGGGG...TGAAGGCTTGCCAACTCCACAGGTTGATTGGAACAAAATTGGTGGTGACTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp CCCTACTTCGTTCACGGCTATGACCCTGAACTGGTATCTCACAAATGGAGCCAATGCTCCTCCGGCCCGTaGTTTTTCGCAGGAGTTCCC +
Preference number: 2 (lower is better)
Translates to: PYFVHGYDPELVSHKWSQCSSGP*FFAGVP
Trigger: GGGAACTCCTGCGAAAAACCACGGGCCGGAGGAGCA...TTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCGCATGGGAGGACAATTaGATCTCCCTCCTCCACTTC +
Preference number: 2 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLAWEDN*ISLLHF
Trigger: GAAGTGGAGGAGGGAGATCCAATTGTCCTCCCATGC...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGACACTGGGGCTCCCTGTaGCTTCCAGGTCACTCTGTA +
Preference number: 2 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRHWGSL*LPGHSV
Trigger: TACAGAGTGACCTGGAAGCCACAGGGAGCCCCAGTG...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCCTATACACAGCACTCTaGGGCTTCTTTGTCCAGCGA +
Preference number: 2 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLLYTAL*GFFVQR
Trigger: TCGCTGGACAAAGAAGCCTCAGAGTGCTGTGTATAG...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR GCA 90 bp ACATTAGATATACGATTAGTCCTCTTCCAAGTAAAAGCGGCTCCATTGCTCTTCGGAGTTCCCCGGCCCTaGCCCTGGCTGAGACACTGT +
Preference number: 2 (lower is better)
Translates to: TLDIRLVLFQVKAAPLLFGVPRP*PWLRHC
Trigger: ACAGTGTCTCAGCCAGGGGCAGGGCCGGGGAACTCC...GAAGAGCAATGGAGCCGCTTTTACTTGGAAGAGGACTAATCGTATATCTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CAA 90 bp GTTGGCAAGCCTTCAGCAAAACACTCAAGCAGCAAGATTTCCCCTTaGAGGATGGTAATTGAAGACTCACTGCCACTCTCAGTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: VGKPSAKHSSSKISP*RMVIEDSLPLSVGG
Trigger: GCCTCCCACTGAGAGTGGCAGTGAGTCTTCAATTACCATCCTCAAAGGGGAAATCTTGCTGCTTGAGTGTTTTGCTGAAGGCTTGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp CCCTACTTCGTTCACGGCTATGACCCTGAACTGGTATCTCACAAATGGAGCCAACACTTGATTGTGGGTTaGGGTTCTCCTTCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: PYFVHGYDPELVSHKWSQHLIVG*GSPSAS
Trigger: TGAGGCTGAAGGAGAACCTCAACCCACAATCAAGTG...TTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp CTTCACATTCAATTTGAAAATACTCATCGAAGGGAAAGGCAACTTGGACTTTTGTGGGAACGGAGGGGCTaGCTTTCCCCAGCCTCCCGG +
Preference number: 2 (lower is better)
Translates to: LHIQFENTHRRERQLGLLWERRG*LSPASR
Trigger: CCGGGAGGCTGGGGAAAGCCAGCCCCTCCGTTCCCA...CAAAAGTCCAAGTTGCCTTTCCCTTCGATGAGTATTTTCAAATTGAATGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp TGTTCCCAAGAAATTGCTGGCTGTGCAGCGATAATTTCCTTTGTCCTGGTAGGAAAGGTGGGAGGCCTTTaGGAGGATTGCATGGGAGGA +
Preference number: 2 (lower is better)
Translates to: CSQEIAGCAAIISFVLVGKVGGL*EDCMGG
Trigger: TCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTT...TCCTACCAGGACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCTATGGAAGGTTGGGGTaGACCAGTAGCGTTGCTTAC +
Preference number: 2 (lower is better)
Translates to: EQWALSACSRIKQPSDHRYGRLG*TSSVAY
Trigger: GTAAGCAACGCTACTGGTTCACCCCAACCTTCCATA...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR-3UTR TCA 90 bp AAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCCCTCCTTATCCGATGGTCAGTaGAATAAAAAGGGTTGCCAT +
Preference number: 2 (lower is better)
Translates to: KGGRPLGGLHGRTIGSPSLSDGQ*NKKGCH
Trigger: ATGGCAACCCTTTTTATTTCACTGACCATCGGATAA...GGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCTGTCTTTCAGACAAGTaGAGGTTTTCTGGTGGATCC +
Preference number: 2 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLCLSDK*RFSGGS
Trigger: GGATCCACCAGAAAACCTTCACTTGTCTGAAAGACA...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAGAAATCGGAGGAGGATaGAGCTCGAGTTGCACTGAT +
Preference number: 2 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSEIGGG*SSSCTD
Trigger: ATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTTC...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTCTGGCTGAGACACTGTaGCTCGCAGCGAGCCCGGAG +
Preference number: 2 (lower is better)
Translates to: PSCLNYILKNAIIIAPILLAETL*LAASPE
Trigger: CTCCGGGCTCGCTGCGAGCCACAGTGTCTCAGCCAG...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CAA 90 bp AGAGGAGACAGAATAACACCAGAACTAAGCTCGAACGTCACAACCTaGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAA +
Preference number: 2 (lower is better)
Translates to: RGDRITPELSSNVTT*PSSQAVHHSFLPDK
Trigger: TTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGTGACGTTCGAGCTTAGTTCTGGTGTTATTCTGTCTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CCA 90 bp TGTTCCCAAGAAATTGCTGGCTGTGCAGCGATAATTTCCTTTGTCCTGGTAGGAGTTCCAATCAACCTGTaGAGTTGGCAAGCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: CSQEIAGCAAIISFVLVGVPINL*SWQAFS
Trigger: GCTGAAGGCTTGCCAACTCCACAGGTTGATTGGAAC...TCCTACCAGGACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCTTCCCAAGAAATTGCTaGCTGTGCAGCGATAATTTC +
Preference number: 2 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLFPRNC*LCSDNF
Trigger: GAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAA...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACTATGGAAGGTTGGGGTaGACCAGTAGCGTTGCTTAC +
Preference number: 2 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNYGRLG*TSSVAY
Trigger: GTAAGCAACGCTACTGGTTCACCCCAACCTTCCATA...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR-3UTR GCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTGGACTGGAGCACAACTaGCAGAAAATAAATTCCCTG +
Preference number: 2 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIGLEHN*QKINSL
Trigger: CAGGGAATTTATTTTCTGGCAGTTGTGCTCCAGTCC...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACAATAAATATGGAAGGTTaGGGTGAACCAGTAGCGTTG +
Preference number: 2 (lower is better)
Translates to: KSEEDGARVALMDVYILTINMEG*GEPVAL
Trigger: CAACGCTACTGGTTCACCCCAACCTTCCATATTTAT...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACATTTCTTTTGAGGGGCTaGGGTAGATGTACATTCAAC +
Preference number: 2 (lower is better)
Translates to: KSEEDGARVALMDVYILTFLLRG*GRCTFN
Trigger: GTTGAATGTACATCTACCCCAGCCCCTCAAAAGAAA...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CAA 90 bp AAATCAGTGCTGGAACCAGGAAGAGAATTTGGATTTTCCCAACCCTaGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTCTTGAGA +
Preference number: 2 (lower is better)
Translates to: KSVLEPGREFGFSQP*DSSLGTHAHQPFLR
Trigger: TCTCAAGAATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCAAATTCTCTTCCTGGTTCCAGCACTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR TCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTATGTTGACTTCTGGATaGAATCTTCGGCCAGCATGT +
Preference number: 2 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSMLTSG*NLRPAC
Trigger: ACATGCTGGCCGAAGATTTCATCCAGAAGTCAACAT...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR-3UTR TCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCATCTATACATTCTGGATaGCTCGTGAGGTTCAAAAGG +
Preference number: 2 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSSIHSG*LVRFKR
Trigger: CCTTTTGAACCTCACGAGTCATCCAGAATGTATAGA...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTTTTCTTTTGAGGGGCTaGGGTAGATGTACATTCAAC +
Preference number: 2 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIFLLRG*GRCTFN
Trigger: GTTGAATGTACATCTACCCCAGCCCCTCAAAAGAAA...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CCA 90 bp GTTTTCTGGTGGATCCGGAACATCAAGAACAGTTACTTGAGTTATATCGGCAGCTTTGGGAGGATTGCATaGGAGGACAATTGGATCTCC +
Preference number: 2 (lower is better)
Translates to: VFWWIRNIKNSYLSYIGSFGRIA*EDNWIS
Trigger: GGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAA...GCTGCCGATATAACTCAAGTAACTGTTCTTGATGTTCCGGATCCACCAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp TTGGCATTGGCAAGGATAGTTCCATGGACATTTGAGGCTTCACACTGGTACACACGTGAAAATCGTGAGTaGCTGTTCCCAAGAAATTGC +
Preference number: 2 (lower is better)
Translates to: LALARIVPWTFEASHWYTRENRE*LFPRNC
Trigger: GCAATTTCTTGGGAACAGCCACTCACGATTTTCACG...TGTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACTATCCTTGCCAATGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CAA 90 bp TTTCAAAGGCTCCCACTTTATAATCATTTCCTTGGGTTGAGAGGCTaGAACCCTTATGTTTTGTGGATTCCTATCTGGAGCTGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: FQRLPLYNHFLGLRG*NPYVLWIPIWSCWW
Trigger: CCACCAGCAGCTCCAGATAGGAATCCACAAAACATAAGGGTTCAAGCCTCTCAACCCAAGGAAATGATTATAAAGTGGGAGCCTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGATGGAACCTGTTGAACTaGAGATGGTATTTCAATTGC +
Preference number: 2 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRWNLLN*RWYFNC
Trigger: GCAATTGAAATACCATCTTCAGTTCAACAGGTTCCA...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGAGATTCCCAGTTTATTTaGAGCAAAGCAGCGGTATTT +
Preference number: 2 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRDSQFI*SKAAVF
Trigger: AAATACCGCTGCTTTGCTTCAAATAAACTGGGAATC...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR GCA 90 bp TTGGCATTGGCAAGGATAGTTCCATGGACATTTGAGGCTTCACACTGGTACACAATAACAAGATGCCATTaGTTCCGGTGCTATACACAG +
Preference number: 2 (lower is better)
Translates to: LALARIVPWTFEASHWYTITRCH*FRCYTQ
Trigger: CTGTGTATAGCACCGGAAGCAATGGCATCTTGTTAT...TGTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACTATCCTTGCCAATGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp GGTAAGTCACCACCAATTTTGTTCCAATCAACCTGTGGAGTTGGCAAGCCTTCAGTCTCCTCTCACTTTTaGTTTACAGCTGAGACCTTA +
Preference number: 2 (lower is better)
Translates to: GKSPPILFQSTCGVGKPSVSSHF*FTAETL
Trigger: TAAGGTCTCAGCTGTAAACCAAAAGTGAGAGGAGAC...TGAAGGCTTGCCAACTCCACAGGTTGATTGGAACAAAATTGGTGGTGACTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp CCCTACTTCGTTCACGGCTATGACCCTGAACTGGTATCTCACAAATGGAGCCAAAAGGGAAAGGCAACTTaGACTTTTGACTGTTTTATG +
Preference number: 2 (lower is better)
Translates to: PYFVHGYDPELVSHKWSQKGKAT*TFDCFM
Trigger: CATAAAACAGTCAAAAGTCCAAGTTGCCTTTCCCTT...TTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGAAGTCCACGAAAATGTTaGTTCTGGATTTCCTTTAGC +
Preference number: 2 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRSPRKC*FWISFS
Trigger: GCTAAAGGAAATCCAGAACCAACATTTTCGTGGACT...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGCACTGCCACTCTCAGTaGGAGGCAACAGCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: FSPSLVCINGRTSTTSILHCHSQ*EATAVW
Trigger: CCAAACTGCTGTTGCCTCCCACTGAGAGTGGCAGTG...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CAA 90 bp CTCCATGGATTTCAAAGGCTCCCACTTTATAATCATTTCCTTGGGTaGAGAGGCTTGAACCCTTATGTTTTGTGGATTCCTATCTGGAGC +
Preference number: 2 (lower is better)
Translates to: LHGFQRLPLYNHFLG*RGLNPYVLWIPIWS
Trigger: GCTCCAGATAGGAATCCACAAAACATAAGGGTTCAAGCCTCTCAACCCAAGGAAATGATTATAAAGTGGGAGCCTTTGAAATCCATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGAATTGTTGGAACCTGTTaGACTGAAGATGGTATTTCA +
Preference number: 2 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRIVGTC*TEDGIS
Trigger: TGAAATACCATCTTCAGTTCAACAGGTTCCAACAAT...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTCACGACTGCCTCAGGTaGAGCAAAGAACTCGCAATG +
Preference number: 2 (lower is better)
Translates to: PSCLNYILKNAIIIAPILHDCLR*SKELAM
Trigger: CATTGCGAGTTCTTTGCTTCACCTGAGGCAGTCGTG...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR GCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTACTTCCCCCTTTGAAATaGTTACTCCCGGGACTGCGG +
Preference number: 2 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLLPPLK*LLPGLR
Trigger: CCGCAGTCCCGGGAGTAAGCATTTCAAAGGGGGAAG...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CAA 90 bp CAGCAAAGCAACAGTAGTCATTGCGACTGTCCTTTTCTTCCACGTTaGCGAAGTATAGATCTCCCTTTTGGCTCATGTATACTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: QQSNSSHCDCPFLPR*RSIDLPFGSCILFH
Trigger: ATGAAAGAGTATACATGAGCCAAAAGGGAGATCTATACTTCGCAAACGTGGAAGAAAAGGACAGTCGCAATGACTACTGTTGCTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CAA 90 bp GTAATTGAAGACTCACTGCCACTCTCAGTGGGAGGCAACAGCAGTTaGGGTTTTCTTTGCTTGATGGAATTTGAACTGTTAACTGTTAGT +
Preference number: 2 (lower is better)
Translates to: VIEDSLPLSVGGNSS*GFLCLMEFELLTVS
Trigger: ACTAACAGTTAACAGTTCAAATTCCATCAAGCAAAGAAAACCCAAACTGCTGTTGCCTCCCACTGAGAGTGGCAGTGAGTCTTCAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp TCTTCTGTGCCATTAATTTCAAAGGCTTCTCCATCTTTACTCCAGGACAACTTCTTTGAGGATGGTAATTaGAGACTCACTGCCACTCTC +
Preference number: 2 (lower is better)
Translates to: SSVPLISKASPSLLQDNFFEDGN*RLTATL
Trigger: GAGAGTGGCAGTGAGTCTTCAATTACCATCCTCAAA...GAAGTTGTCCTGGAGTAAAGATGGAGAAGCCTTTGAAATTAATGGCACAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp CATATAAACCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTGAAAAATGCAGAATAGAGAGTCACTaGCTGAGGGTCAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: HINQHILSLLSQLHLEKCRIESH*LRVRPR
Trigger: TCTGGGCCTGACCCTCAGTCAGTGACTCTCTATTCT...GCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGGTTTATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR GCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTAACATAGGCCTGAAGTaGTTGGCATTTTATATTTTG +
Preference number: 2 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTINIGLK*LAFYIL
Trigger: CAAAATATAAAATGCCAAGCACTTCAGGCCTATGTT...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR GCA 90 bp CCAACAGACTTTTTGTTTTCCACCAATTTATCTGATAGCCTTTCAGACGTCCATGACAGGATTATGGTTTaGAGTTTACAGCACCTGGGC +
Preference number: 2 (lower is better)
Translates to: PTDFLFSTNLSDSLSDVHDRIMV*SLQHLG
Trigger: GCCCAGGTGCTGTAAACTGCAAACCATAATCCTGTC...ATGGACGTCTGAAAGGCTATCAGATAAATTGGTGGAAAACAAAAAGTCTGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAATAAATATGGAAGGTTaGGGTGAACCAGTAGCGTTG +
Preference number: 2 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIINMEG*GEPVAL
Trigger: CAACGCTACTGGTTCACCCCAACCTTCCATATTTAT...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR-3UTR CCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCCAGGATGTTGACTTCTaGATGAAATCTTCGGCCAGC +
Preference number: 2 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIQDVDF*MKSSAS
Trigger: GCTGGCCGAAGATTTCATCCAGAAGTCAACATCCTG...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR TCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAGAGCTCGAGTTGCACTaGTGGATGTCTACATCCTCA +
Preference number: 2 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLELELH*WMSTSS
Trigger: TGAGGATGTAGACATCCATCAGTGCAACTCGAGCTC...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR TCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTAGTTCCATGGACATTTaGGGCTTCACACTGGTACAC +
Preference number: 2 (lower is better)
Translates to: PSCLNYILKNAIIIAPILSSMDI*GFTLVH
Trigger: GTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACT...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTTGGATGATTGTCAACTaGGGAGCCATTGACTCTCCA +
Preference number: 2 (lower is better)
Translates to: PSCLNYILKNAIIIAPILWMIVN*GAIDSP
Trigger: TGGAGAGTCAATGGCTCCCCAGTTGACAATCATCCA...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp CATATAAACCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTGAAAAATGCTCTTTCCTTGGACTCTaGTCAGTTCCTCCCACCTTC +
Preference number: 2 (lower is better)
Translates to: HINQHILSLLSQLHLEKCSFLGL*SVPPTF
Trigger: GAAGGTGGGAGGAACTGACCAGAGTCCAAGGAAAGA...GCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGGTTTATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGAAGTTCTTGCTCCTTTaGACAGATAAATATGGAAGG +
Preference number: 2 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMKFLLL*TDKYGR
Trigger: CCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTT...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR-3UTR GCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGACAATGGGCACTTTCTaGCTGTTCTCGTATAAAACA +
Preference number: 2 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRTMGTF*LFSYKT
Trigger: TGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGT...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR GCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGCTTGACCGACATGTATaGATCATCCTCCATATTGTT +
Preference number: 2 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRLDRHV*IILHIV
Trigger: AACAATATGGAGGATGATGCATACATGTCGGTCAAG...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR GCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTATTCCTATCTGGAGCTaGTGGTGGTGTTTCATGATG +
Preference number: 2 (lower is better)
Translates to: PSCLNYILKNAIIIAPILIPIWS*WWCFMM
Trigger: CATCATGAAACACCACCAGCAGCTCCAGATAGGAAT...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAATAAATATGGAAGGTTaGGGTGAACCAGTAGCGTTG +
Preference number: 2 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKINMEG*GEPVAL
Trigger: CAACGCTACTGGTTCACCCCAACCTTCCATATTTAT...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR-3UTR TCA 90 bp TGCAGCGATAATTTCCTTTGTCCTGGTAGGAGACATTCTCTATCTTCAAAGTCTGATCCTGAATGTTCCTaGATTGTTCGATGGAATTAT +
Preference number: 2 (lower is better)
Translates to: CSDNFLCPGRRHSLSSKSDPECS*IVRWNY
Trigger: ATAATTCCATCGAACAATTCAGGAACATTCAGGATC...AGACTTTGAAGATAGAGAATGTCTCCTACCAGGACAAAGGAAATTATCGCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR GCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCACAATGGGCACTTTCTaGCTGTTCTCGTATAAAACA +
Preference number: 2 (lower is better)
Translates to: GNHVNLFYIPFISFDDVITMGTF*LFSYKT
Trigger: TGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGT...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR GCA 90 bp CCAACAGACTTTTTGTTTTCCACCAATTTATCTGATAGCCTTTCAGACGTCCATAGAAATTGCTGGCTGTaGAGCGATAATTTCCTTTGT +
Preference number: 2 (lower is better)
Translates to: PTDFLFSTNLSDSLSDVHRNCWL*SDNFLC
Trigger: ACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCT...ATGGACGTCTGAAAGGCTATCAGATAAATTGGTGGAAAACAAAAAGTCTGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR GCA 90 bp CATATAAACCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTGAAAAATGCCCTCACATAACAAGATaGCATTGCTTCCGGTGCTAT +
Preference number: 2 (lower is better)
Translates to: HINQHILSLLSQLHLEKCPHITR*HCFRCY
Trigger: ATAGCACCGGAAGCAATGGCATCTTGTTATGTGAGG...GCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGGTTTATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCAAATATGACCATCTCTaGGCAAATAGGAGCTCAACA +
Preference number: 2 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIKYDHL*ANRSST
Trigger: TGTTGAGCTCCTATTTGCCCAGAGATGGTCATATTT...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CCA 90 bp TGCAGCGATAATTTCCTTTGTCCTGGTAGGAGACATTCTCTATCTTCAAAGTCTATTAAGACAGGATTATaGTTTGCAGTTTACAGCACC +
Preference number: 2 (lower is better)
Translates to: CSDNFLCPGRRHSLSSKSIKTGL*FAVYST
Trigger: GGTGCTGTAAACTGCAAACCATAATCCTGTCTTAAT...AGACTTTGAAGATAGAGAATGTCTCCTACCAGGACAAAGGAAATTATCGCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR GCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGAACATAGGCCTGAAGTaGTTGGCATTTTATATTTTG +
Preference number: 2 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRNIGLK*LAFYIL
Trigger: CAAAATATAAAATGCCAAGCACTTCAGGCCTATGTT...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR GCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCAAGAGTCCCAGTAGTTaGCAAATAGTATTGAGGAAA +
Preference number: 2 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIKSPSS*QIVLRK
Trigger: TTTCCTCAATACTATTTGGCAACTACTGGGACTCTT...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR GCA 90 bp TGCAGCGATAATTTCCTTTGTCCTGGTAGGAGACATTCTCTATCTTCAAAGTCTAGTTTGGGTTTTCTTTaGTTGATGGAATTTGAACTG +
Preference number: 2 (lower is better)
Translates to: CSDNFLCPGRRHSLSSKSSLGFL*LMEFEL
Trigger: CAGTTCAAATTCCATCAAGCAAAGAAAACCCAAACT...AGACTTTGAAGATAGAGAATGTCTCCTACCAGGACAAAGGAAATTATCGCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTACCTGTCTATACATTCTaGATGACTCGTGAGGTTCAA +
Preference number: 2 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLPVYTF*MTREVQ
Trigger: TTGAACCTCACGAGTCATCCAGAATGTATAGACAGG...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTTTTGGTTTGTATCAATaGACGGACATCCACAACATC +
Preference number: 2 (lower is better)
Translates to: PSCLNYILKNAIIIAPILFGLYQ*TDIHNI
Trigger: GATGTTGTGGATGTCCGTCCATTGATACAAACCAAA...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR TCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTACTGTGTTTCAAATGTaGGTCACATTTGCTTTCACA +
Preference number: 2 (lower is better)
Translates to: PSCLNYILKNAIIIAPILTVFQM*VTFAFT
Trigger: TGTGAAAGCAAATGTGACTCACATTTGAAACACAGT...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR GCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAAACATAGGCCTGAAGTaGTTGGCATTTTATATTTTG +
Preference number: 2 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKNIGLK*LAFYIL
Trigger: CAAAATATAAAATGCCAAGCACTTCAGGCCTATGTT...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR-3UTR CCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTATTGACTTATCACGAGTaGGCAATTTGCAAACAAGCA +
Preference number: 2 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLLTYHE*AICKQA
Trigger: TGCTTGTTTGCAAATTGCCCACTCGTGATAAGTCAA...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR TCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAAAGTTCTTGCTCCTTTaGACAGATAAATATGGAAGG +
Preference number: 2 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLKFLLL*TDKYGR
Trigger: CCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTT...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR GCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTATATGTACAAAATCAGTaGTGGAACCAGGAAGAGAAT +
Preference number: 2 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLYVQNQ*WNQEEN
Trigger: ATTCTCTTCCTGGTTCCAGCACTGATTTTGTACATA...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR GCA 72 bp TCCGGCCCGTGGTTTTTCGCAGGAGTTCCCCGGCCCTaGCCCTGGCTGAGACACTGTGGCTCGCAGCGAGCC +
Preference number: 3 (lower is better)
Translates to: SGPWFFAGVPRP*PWLRHCGSQRA
Trigger: GGCTCGCTGCGAGCCACAGTGTCTCAGCCAGGGGCAGGGCCGGGGAACTCCTGCGAAAAACCACGGGCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 72 bp CTTTACTCCCTTCTCCTAAGGTGGAGCTTTCCTCCGTaGTCGGTTTTCCACAGCCCTGTGAAGTGCAAGCCC +
Preference number: 3 (lower is better)
Translates to: LYSLLLRWSFPP*SVFHSPVKCKP
Trigger: GGGCTTGCACTTCACAGGGCTGTGGAAAACCGATCACGGAGGAAAGCTCCACCTTAGGAGAAGGGAGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp TTTGTGGATTCCTATCTGGAGCTGCTGGTGGTGTTTCATGATGGTCTGACGGCTAAAGGTGGGAGGCCTTaGGGAGGATTGCATGGGAGG +
Preference number: 3 (lower is better)
Translates to: FVDSYLELLVVFHDGLTAKGGRP*GGLHGR
Trigger: CCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT...AGCCGTCAGACCATCATGAAACACCACCAGCAGCTCCAGATAGGAATCCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 72 bp AAGATGCCATTGCTTCCGGTGCTATACACAGCACTCTaGGGCTTCTTTGTCCAGCGAGGAGGCTCTTCTACT +
Preference number: 3 (lower is better)
Translates to: KMPLLPVLYTAL*GFFVQRGGSST
Trigger: AGTAGAAGAGCCTCCTCGCTGGACAAAGAAGCCTCAGAGTGCTGTGTATAGCACCGGAAGCAATGGCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CCA 72 bp TGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTaGATCTCCCTCCTCCACTTCAAGAGGGTCAATTTT +
Preference number: 3 (lower is better)
Translates to: WEAFGRIAWEDN*ISLLHFKRVNF
Trigger: AAAATTGACCCTCTTGAAGTGGAGGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 72 bp ACTGGGGAGCCATTGACTCTCCACTTGATTGTGGGTTaGGGTTCTCCTTCAGCCTCACATAACAAGATGCCA +
Preference number: 3 (lower is better)
Translates to: TGEPLTLHLIVG*GSPSASHNKMP
Trigger: TGGCATCTTGTTATGTGAGGCTGAAGGAGAACCTCAACCCACAATCAAGTGGAGAGTCAATGGCTCCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 72 bp GGAGCTTTCCTCCGTGATCGGTTTTCCACAGCCCTGTaGAGTGCAAGCCCTCAAGTAGAATTTGTACTTGGT +
Preference number: 3 (lower is better)
Translates to: GAFLRDRFSTAL*SASPQVEFVLG
Trigger: ACCAAGTACAAATTCTACTTGAGGGCTTGCACTTCACAGGGCTGTGGAAAACCGATCACGGAGGAAAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR GCA 72 bp CTTCAGCCTCACATAACAAGATGCCATTGCTTCCGGTaGTATACACAGCACTCTGAGGCTTCTTTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: LQPHITRCHCFR*YTQHSEASLSS
Trigger: GCTGGACAAAGAAGCCTCAGAGTGCTGTGTATAGCACCGGAAGCAATGGCATCTTGTTATGTGAGGCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR GCA 72 bp GAGGTTCTCCTTCAGCCTCACATAACAAGATGCCATTaGTTCCGGTGCTATACACAGCACTCTGAGGCTTCT +
Preference number: 3 (lower is better)
Translates to: EVLLQPHITRCH*FRCYTQHSEAS
Trigger: AGAAGCCTCAGAGTGCTGTGTATAGCACCGGAAGCAATGGCATCTTGTTATGTGAGGCTGAAGGAGAACCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR GCA 72 bp TGGGTTGAGGTTCTCCTTCAGCCTCACATAACAAGATaGCATTGCTTCCGGTGCTATACACAGCACTCTGAG +
Preference number: 3 (lower is better)
Translates to: WVEVLLQPHITR*HCFRCYTQHSE
Trigger: CTCAGAGTGCTGTGTATAGCACCGGAAGCAATGGCATCTTGTTATGTGAGGCTGAAGGAGAACCTCAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR GCA 72 bp TCTGCAATGTGCCATTTTCATAGATATGATACCGCCTaGCCTCCAGGGGTTTCACTTCTTCCACCTTCTGCC +
Preference number: 3 (lower is better)
Translates to: SAMCHFHRYDTA*PPGVSLLPPSA
Trigger: GGCAGAAGGTGGAAGAAGTGAAACCCCTGGAGGGCAGGCGGTATCATATCTATGAAAATGGCACATTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp TTGGCATTGGCAAGGATAGTTCCATGGACATTTGAGGCTTCACACTGGTACACACCACTTGATTGTGGGTaGAGGTTCTCCTTCAGCCTC +
Preference number: 3 (lower is better)
Translates to: LALARIVPWTFEASHWYTPLDCG*RFSFSL
Trigger: GAGGCTGAAGGAGAACCTCAACCCACAATCAAGTGG...TGTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACTATCCTTGCCAATGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGATCAACTGGGGAGCCATaGACTCTCCACTTGATTGTG +
Preference number: 3 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRSTGEP*TLHLIV
Trigger: CACAATCAAGTGGAGAGTCAATGGCTCCCCAGTTGA...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 72 bp CTTAGAAATCGGAGGAGGATGGAGCTCGAGTTGCACTaGTGGATGTCTACATCCTCACATTCACACAGGGTA +
Preference number: 3 (lower is better)
Translates to: LRNRRRMELELH*WMSTSSHSHRV
Trigger: TACCCTGTGTGAATGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR GCA 72 bp GGAACCTTAGAAATCGGAGGAGGATGGAGCTCGAGTTaGACTGATGGATGTCTACATCCTCACATTCACACA +
Preference number: 3 (lower is better)
Translates to: GTLEIGGGWSSS*TDGCLHPHIHT
Trigger: TGTGTGAATGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTTCTAAGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR GCA 72 bp GCTCGAACGTCACAACCTTGCCCTCCTCACAAGCTGTaGACCACAGTTTTCTCCCAGATAAATCAAAACATG +
Preference number: 3 (lower is better)
Translates to: ARTSQPCPPHKL*TTVFSQINQNM
Trigger: CATGTTTTGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGTGACGTTCGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CCA 72 bp CTCCAGAAAACTGGAACCTTAGAAATCGGAGGAGGATaGAGCTCGAGTTGCACTGATGGATGTCTACATCCT +
Preference number: 3 (lower is better)
Translates to: LQKTGTLEIGGG*SSSCTDGCLHP
Trigger: AGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTTCTAAGGTTCCAGTTTTCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CCA 72 bp CGTGAAAATCGTGAGTGGCTGTTCCCAAGAAATTGCTaGCTGTGCAGCGATAATTTCCTTTGTCCTGGTAGG +
Preference number: 3 (lower is better)
Translates to: RENREWLFPRNC*LCSDNFLCPGR
Trigger: CCTACCAGGACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAACAGCCACTCACGATTTTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCACATCAATATTGGCATaGGCAAGGATAGTTCCATGG +
Preference number: 3 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLTSILA*ARIVPW
Trigger: CCATGGAACTATCCTTGCCAATGCCAATATTGATGT...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGTCGAACGTCACAACCTaGCCCTCCTCACAAGCTGTG +
Preference number: 3 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRSNVTT*PSSQAV
Trigger: CACAGCTTGTGAGGAGGGCAAGGTTGTGACGTTCGA...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR GCA 72 bp AATCGTGAGTGGCTGTTCCCAAGAAATTGCTGGCTGTaGAGCGATAATTTCCTTTGTCCTGGTAGGAGACAT +
Preference number: 3 (lower is better)
Translates to: NREWLFPRNCWL*SDNFLCPGRRH
Trigger: ATGTCTCCTACCAGGACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAACAGCCACTCACGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CCA 72 bp TTCCTTGGGTTGAGAGGCTTGAACCCTTATGTTTTGTaGATTCCTATCTGGAGCTGCTGGTGGTGTTTCATG +
Preference number: 3 (lower is better)
Translates to: FLGLRGLNPYVL*IPIWSCWWCFM
Trigger: CATGAAACACCACCAGCAGCTCCAGATAGGAATCCACAAAACATAAGGGTTCAAGCCTCTCAACCCAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCAGCAGTATGATTTGGTaGAAGGTTGGTAAAACTGAT +
Preference number: 3 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLSSMIW*KVGKTD
Trigger: ATCAGTTTTACCAACCTTCAACCAAATCATACTGCT...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CCA 72 bp TATTCATCCAATAAATGTGTAAAGGTGGGAGGCCTTTaGGAGGATTGCATGGGAGGACAATTGGATCTCCCT +
Preference number: 3 (lower is better)
Translates to: YSSNKCVKVGGL*EDCMGGQLDLP
Trigger: AGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTTACACATTTATTGGATGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CCA 72 bp CTTCTCCCTACTTCGTTCACGGCTATGACCCTGAACTaGTATCTCACAAATGGAGCCAAAGGTAAGATAACT +
Preference number: 3 (lower is better)
Translates to: LLPTSFTAMTLN*YLTNGAKGKIT
Trigger: AGTTATCTTACCTTTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp TGTTCCCAAGAAATTGCTGGCTGTGCAGCGATAATTTCCTTTGTCCTGGTAGGACGATTCCCAGTTTATTaGAAGCAAAGCAGCGGTATT +
Preference number: 3 (lower is better)
Translates to: CSQEIAGCAAIISFVLVGRFPVY*KQSSGI
Trigger: AATACCGCTGCTTTGCTTCAAATAAACTGGGAATCG...TCCTACCAGGACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 72 bp AGATATGTGCCCCTCGTTTGGGATCCTGAATGTTCCTaGATTGTTCGATGGAATTATCCGATGGTCAGTGAA +
Preference number: 3 (lower is better)
Translates to: RYVPLVWDPECS*IVRWNYPMVSE
Trigger: TTCACTGACCATCGGATAATTCCATCGAACAATTCAGGAACATTCAGGATCCCAAACGAGGGGCACATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CCA 72 bp ATAAATCAAAACATGATGACTGTCCCTCCAGAAAACTaGAACCTTAGAAATCGGAGGAGGATGGAGCTCGAG +
Preference number: 3 (lower is better)
Translates to: INQNMMTVPPEN*NLRNRRRMELE
Trigger: CTCGAGCTCCATCCTCCTCCGATTTCTAAGGTTCCAGTTTTCTGGAGGGACAGTCATCATGTTTTGATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CAA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTATAGGCCTGAAGTGCTaGGCATTTTATATTTTGAAG +
Preference number: 3 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIIGLKC*AFYILK
Trigger: CTTCAAAATATAAAATGCCAAGCACTTCAGGCCTAT...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CAA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCTGTCGAGCGCTGAACTaGACCGACATGTATGCATCA +
Preference number: 3 (lower is better)
Translates to: GNHVNLFYIPFISFDDVICRALN*TDMYAS
Trigger: TGATGCATACATGTCGGTCAAGTTCAGCGCTCGACA...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CAA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTATCGAACGTCACAACCTaGCCCTCCTCACAAGCTGTG +
Preference number: 3 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLSNVTT*PSSQAV
Trigger: CACAGCTTGTGAGGAGGGCAAGGTTGTGACGTTCGA...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CAA 90 bp GGTAAGTCACCACCAATTTTGTTCCAATCAACCTGTGGAGTTGGCAAGCCTTCACTGAATGTTCCTGAATaGTTCGATGGAATTATCCGA +
Preference number: 3 (lower is better)
Translates to: GKSPPILFQSTCGVGKPSLNVPE*FDGIIR
Trigger: TCGGATAATTCCATCGAACAATTCAGGAACATTCAG...TGAAGGCTTGCCAACTCCACAGGTTGATTGGAACAAAATTGGTGGTGACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 72 bp AATATTGGCATTGGCAAGGATAGTTCCATGGACATTTaGGGCTTCACACTGGTACACAGCAGTATGATTTGG +
Preference number: 3 (lower is better)
Translates to: NIGIGKDSSMDI*GFTLVHSSMIW
Trigger: CCAAATCATACTGCTGTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACTATCCTTGCCAATGCCAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCGGATTTTCCCAACCCTaGGACAGTTCTCTAGGAACT +
Preference number: 3 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIGFSQP*DSSLGT
Trigger: AGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCC...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CAA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTGCAGCGGTATTTCCCTaGAAAGTGAGATATGTGCCC +
Preference number: 3 (lower is better)
Translates to: PSCLNYILKNAIIIAPILAAVFP*KVRYVP
Trigger: GGGCACATATCTCACTTTCAAGGGAAATACCGCTGC...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 72 bp ATGAGTAAGACCCAGCATCTTCTTCGGTGGTTCTGTTaGTCTGCAATGTGCCATTTTCATAGATATGATACC +
Preference number: 3 (lower is better)
Translates to: MSKTQHLLRWFC*SAMCHFHRYDT
Trigger: GGTATCATATCTATGAAAATGGCACATTGCAGATCAACAGAACCACCGAAGAAGATGCTGGGTCTTACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR GCA 72 bp ATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATaGCCACCAACCATTCTTGAGACTATATACAATCAA +
Preference number: 3 (lower is better)
Translates to: IFPTLGQFSRNS*PPTILETIYNQ
Trigger: TTGATTGTATATAGTCTCAAGAATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CCA 72 bp AGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTaGGGTGAACCAGTAGCGTTGCTTACATATGTTGTG +
Preference number: 3 (lower is better)
Translates to: SSCSFEQINMEG*GEPVALLTYVV
Trigger: CACAACATATGTAAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR CCA 72 bp CCTGTTCTGTCTTTCAGACAAGTGAAGGTTTTCTGGTaGATCCGGAACATCAAGAACAGTTACTTGAGTTAT +
Preference number: 3 (lower is better)
Translates to: PVLSFRQVKVFW*IRNIKNSYLSY
Trigger: ATAACTCAAGTAACTGTTCTTGATGTTCCGGATCCACCAGAAAACCTTCACTTGTCTGAAAGACAGAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTAGACAGGATTATGGTTaGCAGTTTACAGCACCTGGG +
Preference number: 3 (lower is better)
Translates to: PSCLNYILKNAIIIAPILRQDYG*QFTAPG
Trigger: CCCAGGTGCTGTAAACTGCAAACCATAATCCTGTCT...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTGTAAAAGCGGCTCCATaGCTCTTCAGGAAGAAGACA +
Preference number: 3 (lower is better)
Translates to: PSCLNYILKNAIIIAPILVKAAP*LFRKKT
Trigger: TGTCTTCTTCCTGAAGAGCAATGGAGCCGCTTTTAC...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAATAGGCCTGAAGTGCTaGGCATTTTATATTTTGAAG +
Preference number: 3 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIIGLKC*AFYILK
Trigger: CTTCAAAATATAAAATGCCAAGCACTTCAGGCCTAT...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR-3UTR CAA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGCCTTTTCTTCCACGTTaGCGAAGTATAGATCTCCCT +
Preference number: 3 (lower is better)
Translates to: FSPSLVCINGRTSTTSILPFLPR*RSIDLP
Trigger: AGGGAGATCTATACTTCGCAAACGTGGAAGAAAAGG...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 72 bp ACATGCTTTTCCTGTCTATACATTCTGGATGACTCGTaGGGTTCAAAAGGACAAGTAGATATTCCATGTGCA +
Preference number: 3 (lower is better)
Translates to: TCFSCLYILDDS*GSKGQVDIPCA
Trigger: TGCACATGGAATATCTACTTGTCCTTTTGAACCTCACGAGTCATCCAGAATGTATAGACAGGAAAAGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR GCA 72 bp CTCGTGAGGTTCAAAAGGACAAGTAGATATTCCATGTaGATTCCTGCGCTGACTATTATAAATACCCCAAAT +
Preference number: 3 (lower is better)
Translates to: LVRFKRTSRYSM*IPALTIINTPN
Trigger: ATTTGGGGTATTTATAATAGTCAGCGCAGGAATGCACATGGAATATCTACTTGTCCTTTTGAACCTCACGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR GCA 72 bp TTAATCTTGGAAATGCAGCAAAGCAACAGTAGTCATTaGGACTGTCCTTTTCTTCCACGTTTGCGAAGTATA +
Preference number: 3 (lower is better)
Translates to: LILEMQQSNSSH*DCPFLPRLRSI
Trigger: TATACTTCGCAAACGTGGAAGAAAAGGACAGTCGCAATGACTACTGTTGCTTTGCTGCATTTCCAAGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR GCA 72 bp CATAAAATGTCGAGCGCTGAACTTGACCGACATGTATaGATCATCCTCCATATTGTTTCTAAAACATGTTCA +
Preference number: 3 (lower is better)
Translates to: HKMSSAELDRHV*IILHIVSKTCS
Trigger: TGAACATGTTTTAGAAACAATATGGAGGATGATGCATACATGTCGGTCAAGTTCAGCGCTCGACATTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR GCA 72 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTaGCAAATAGTATTGAGGAAAGGTAACAATGATAGC +
Preference number: 3 (lower is better)
Translates to: RSIPFVLKSPSS*QIVLRKGNNDS
Trigger: GCTATCATTGTTACCTTTCCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR GCA 72 bp TTAAGCAACCTGCCTAATGTTTATGTACAAAATCAGTaGTGGAACCAGGAAGAGAATTTGGATTTTCCCAAC +
Preference number: 3 (lower is better)
Translates to: LSNLPNVYVQNQ*WNQEENLDFPN
Trigger: GTTGGGAAAATCCAAATTCTCTTCCTGGTTCCAGCACTGATTTTGTACATAAACATTAGGCAGGTTGCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR-3UTR CAA 90 bp CATATAAACCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTGAAAAATGCTTGAACCCTTATGTTTaGTGGATTCCTATCTGGAGC +
Preference number: 3 (lower is better)
Translates to: HINQHILSLLSQLHLEKCLNPYV*WIPIWS
Trigger: GCTCCAGATAGGAATCCACAAAACATAAGGGTTCAA...GCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGGTTTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR-3UTR CAA 90 bp CATATAAACCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTGAAAAATGCAGAATGTTCACTTCTTaGGGATGTGTTCTTCCATCC +
Preference number: 3 (lower is better)
Translates to: HINQHILSLLSQLHLEKCRMFTS*GCVLPS
Trigger: GGATGGAAGAACACATCCCAAAGAAGTGAACATTCT...GCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGGTTTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR TCA 72 bp TCTTTTCAACATAATTGCAGGATGTTGACTTCTGGATaGAATCTTCGGCCAGCATGTTTCTATTCCTATATG +
Preference number: 3 (lower is better)
Translates to: SFQHNCRMLTSG*NLRPACFYSYM
Trigger: CATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAAGTCAACATCCTGCAATTATGTTGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CCCTACTTCGTTCACGGCTATGACCCTGAACTGGTATCTCACAAATGGAGCCAAGGCCCTGCCCCTGGCTaGGACACTGTGGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PYFVHGYDPELVSHKWSQGPAPG*DTVARS
Trigger: GCTGCGAGCCACAGTGTCTCAGCCAGGGGCAGGGCC...TTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTGTCCCCTCCCGCCGCTaGCTCTCTGGCCGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLVPSRR*LSGRGK
Trigger: CTTCCCGCGGCCAGAGAGCCAGCGGCGGGAGGGGAC...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp ATGTGTAAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCTGGCTGAGACACTGTaGCTCGCAGCGAGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: MCKGGRPLGGLHGRTIGSLAETL*LAASPE
Trigger: CTCCGGGCTCGCTGCGAGCCACAGTGTCTCAGCCAG...AGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTTACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp TTTGTGGATTCCTATCTGGAGCTGCTGGTGGTGTTTCATGATGGTCTGACGGCTGCAGTTTACAGCACCTaGGCCCGCGCGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FVDSYLELLVVFHDGLTAAVYST*ARAAAA
Trigger: AGCAGCAGCCGCGCGGGCCCAGGTGCTGTAAACTGC...AGCCGTCAGACCATCATGAAACACCACCAGCAGCTCCAGATAGGAATCCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACGGGTCTACGCCCTCCTaGCGGAGGCTGGCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNGSTPS*RRLALA
Trigger: GGCGAGAGCCAGCCTCCGGCAGGAGGGCGTAGACCC...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCATGGAGCCGTTCTGGCTaGCACCGGGGTCTACGCCCT +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSWSRSG*HRGLRP
Trigger: AGGGCGTAGACCCCGGTGCCAGCCAGAACGGCTCCA...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256509.7
CDS-3UTR CCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCCGCCGCTGGCTCTCTaGCCGCGGGAAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMPPLAL*PREGWS
Trigger: GCTCCAGCCTTCCCGCGGCCAGAGAGCCAGCGGCGG...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp GTTTTCTGGTGGATCCGGAACATCAAGAACAGTTACTTGAGTTATATCGGCAGCCGCCCCTCGGCGGTCTaGGGAGGTGGAGCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: VFWWIRNIKNSYLSYIGSRPSAV*GGGALA
Trigger: GGCTAGAGCTCCACCTCCCCAGACCGCCGAGGGGCG...GCTGCCGATATAACTCAAGTAACTGTTCTTGATGTTCCGGATCCACCAGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCGACGGCTGGCTAGGCTaGCTTCTCCCTACTTCGTTC +
Preference number: 4 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLDGWLG*LLPTSF
Trigger: GAACGAAGTAGGGAGAAGTCAGCCTAGCCAGCCGTC...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGGGGTCTACGCCCTCCTaGCGGAGGCTGGCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMGSTPS*RRLALA
Trigger: GGCGAGAGCCAGCCTCCGGCAGGAGGGCGTAGACCC...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTCCTCCTGCCGGAGGCTaGCTCTCGCCTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLPPAGG*LSPLLP
Trigger: AGGGAGCAGAGGCGAGAGCCAGCCTCCGGCAGGAGG...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp TTGGCATTGGCAAGGATAGTTCCATGGACATTTGAGGCTTCACACTGGTACACAGGCGGTCTGGGGAGGTaGAGCTCTAGCCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LALARIVPWTFEASHWYTGGLGR*SSSPSL
Trigger: CAGAGAGGGGCTAGAGCTCCACCTCCCCAGACCGCC...TGTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACTATCCTTGCCAATGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAGCAGTTTACAGCACCTaGGCCGCCTCCGAAACGCGA +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSAVYST*AASETR
Trigger: TCGCGTTTCGGAGGCGGCGCAGGTGCTGTAAACTGC...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256509.7
CDS-3UTR CCA 90 bp TCTTCTGTGCCATTAATTTCAAAGGCTTCTCCATCTTTACTCCAGGACAACTTCCGCTACCAGGAGCCATaGCAACCACGGCCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: SSVPLISKASPSLLQDNFRYQEP*QPRPPA
Trigger: CGCCGGGGGCCGTGGTTGCCATGGCTCCTGGTAGCG...GAAGTTGTCCTGGAGTAAAGATGGAGAAGCCTTTGAAATTAATGGCACAGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CAA 72 bp GTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATaGGATCTCCCTCCTCCACTTCAAGAGGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: VGGLWEDCMGGQ*DLPPPLQEGQF
Trigger: AAATTGACCCTCTTGAAGTGGAGGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp AAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCCCTCCAGTTCCATGGACATTTaGGGCTTCACACTGGTACAC +
Preference number: 4 (lower is better)
Translates to: KGGRPLGGLHGRTIGSPSSSMDI*GFTLVH
Trigger: GTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACT...GGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTGACGGCTGGCTAGGCTaGCTTCTCCCTACTTCGTTC +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIDGWLG*LLPTSF
Trigger: GAACGAAGTAGGGAGAAGTCAGCCTAGCCAGCCGTC...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCAGAATAGAGAGTCACTaGCTGAGGGTCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLRIESH*LRVRPR
Trigger: TCTGGGCCTGACCCTCAGTCAGTGACTCTCTATTCT...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTGCTTACTCCCGGGACTaGGGTCAGATCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSAYSRD*GQILSP
Trigger: TGGGCTCAGGATCTGACCGCAGTCCCGGGAGTAAGC...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACACTTCCCCCTTTGAAATaGTTACTCCCGGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTLPPLK*LLPGLR
Trigger: CCGCAGTCCCGGGAGTAAGCATTTCAAAGGGGGAAG...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGGGCCCGCGCGGCTGCTaGTCCTCCGGCCCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: FSPSLVCINGRTSTTSILGPRGC*SSGPWF
Trigger: AAACCACGGGCCGGAGGAGCAGCAGCCGCGCGGGCC...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGCCTCCTGCCGGAGGCTaGCTCTCGCCTCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRPPAGG*LSPLLP
Trigger: AGGGAGCAGAGGCGAGAGCCAGCCTCCGGCAGGAGG...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256509.7
CDS-3UTR CCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAGGCTGGAGCCGTTCTaGCTGGCACCGGGGTCTACG +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRRLEPF*LAPGST
Trigger: CGTAGACCCCGGTGCCAGCCAGAACGGCTCCAGCCT...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACAAAGGTGGGAGGCCTTTaGGAGGATTGCATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTKVGGL*EDCMGG
Trigger: TCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTT...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACACACTGCCACTCTCAGTaGGAGGCAACAGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTHCHSQ*EATAVW
Trigger: CCAAACTGCTGTTGCCTCCCACTGAGAGTGGCAGTG...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp ACATTAGATATACGATTAGTCCTCTTCCAAGTAAAAGCGGCTCCATTGCTCTTCTGGGAACGGAGGGGCTaGCTTTCCCCAGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TLDIRLVLFQVKAAPLLFWERRG*LSPASR
Trigger: CCGGGAGGCTGGGGAAAGCCAGCCCCTCCGTTCCCA...GAAGAGCAATGGAGCCGCTTTTACTTGGAAGAGGACTAATCGTATATCTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCTTTTCCACAGCCCTGTaGAGTGCAAGCCCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLFSTAL*SASPQV
Trigger: TACTTGAGGGCTTGCACTTCACAGGGCTGTGGAAAA...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAACTGCCTTCCCCCTTTaGAATGCTTACTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSTAFPL*NAYSRD
Trigger: GTCCCGGGAGTAAGCATTTCAAAGGGGGAAGGCAGT...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCACTTCCCCCTTTGAAATaGTTACTCCCGGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSLPPLK*LLPGLR
Trigger: CCGCAGTCCCGGGAGTAAGCATTTCAAAGGGGGAAG...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCTGGCCGCGGGAAGGCTaGAGCCGTTCTGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCWPREG*SRSGWH
Trigger: GTGCCAGCCAGAACGGCTCCAGCCTTCCCGCGGCCA...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGTCCCCTCCCGCCGCTaGCTCTCTGGCCGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWVPSRR*LSGRGK
Trigger: CTTCCCGCGGCCAGAGAGCCAGCGGCGGGAGGGGAC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCAAGGTGGGAGGCCTTTaGGAGGATTGCATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRKVGGL*EDCMGG
Trigger: TCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTT...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GGTAAGTCACCACCAATTTTGTTCCAATCAACCTGTGGAGTTGGCAAGCCTTCACACTGGGGCTCCCTGTaGCTTCCAGGTCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: GKSPPILFQSTCGVGKPSHWGSL*LPGHSV
Trigger: TACAGAGTGACCTGGAAGCCACAGGGAGCCCCAGTG...TGAAGGCTTGCCAACTCCACAGGTTGATTGGAACAAAATTGGTGGTGACTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTCCCCGGCCCTGCCCCTaGCTGAGACACTGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: PSCLNYILKNAIIIAPILPRPCP*LRHCGS
Trigger: CGAGCCACAGTGTCTCAGCCAGGGGCAGGGCCGGGG...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACACACTTGATTGTGGGTTaGGGTTCTCCTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTHLIVG*GSPSAS
Trigger: TGAGGCTGAAGGAGAACCTCAACCCACAATCAAGTG...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp ATGTGTAAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTTCACCAGCAAATGGATaGTTGTCAACTGGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: MCKGGRPLGGLHGRTIGSSPANG*LSTGEP
Trigger: TGGCTCCCCAGTTGACAATCATCCATTTGCTGGTGA...AGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTTACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTTGTTTCATGATGGTCTaGCGGCTGGCTAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTICFMMV*RLARLT
Trigger: AGTCAGCCTAGCCAGCCGTCAGACCATCATGAAACA...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCGGCCCAGATCCTAGTTaGTTGATAGCCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRGPDPS*LIAWTL
Trigger: CAAGGTCCAGGCTATCAATCAACTAGGATCTGGGCC...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACATTTTCCACAGCCCTGTaGAGTGCAAGCCCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTFSTAL*SASPQV
Trigger: TACTTGAGGGCTTGCACTTCACAGGGCTGTGGAAAA...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp TTGGCATTGGCAAGGATAGTTCCATGGACATTTGAGGCTTCACACTGGTACACATGGAGCTTTCCTCCGTaGTCGGTTTTCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: LALARIVPWTFEASHWYTWSFPP*SVFHSP
Trigger: AGGGCTGTGGAAAACCGATCACGGAGGAAAGCTCCA...TGTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACTATCCTTGCCAATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp AAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCCCTCCATAACAAGATGCCATTaGTTCCGGTGCTATACACAG +
Preference number: 4 (lower is better)
Translates to: KGGRPLGGLHGRTIGSPSITRCH*FRCYTQ
Trigger: CTGTGTATAGCACCGGAAGCAATGGCATCTTGTTAT...GGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACAAGATATGATACCGCCTaGCCTCCAGGGGTTTCACTT +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTRYDTA*PPGVSL
Trigger: AAGTGAAACCCCTGGAGGGCAGGCGGTATCATATCT...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCTGGAGCCGTTCTGGCTaGCACCGGGGTCTACGCCCT +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCWSRSG*HRGLRP
Trigger: AGGGCGTAGACCCCGGTGCCAGCCAGAACGGCTCCA...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCGGGTCCGGTAAGCTCTaGGCGGATCCAGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCGSGKL*ADPGRV
Trigger: GACCCTCCCTGGATCCGCCCAGAGCTTACCGGACCC...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp GGTAAGTCACCACCAATTTTGTTCCAATCAACCTGTGGAGTTGGCAAGCCTTCACACTGCCACTCTCAGTaGGAGGCAACAGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GKSPPILFQSTCGVGKPSHCHSQ*EATAVW
Trigger: CCAAACTGCTGTTGCCTCCCACTGAGAGTGGCAGTG...TGAAGGCTTGCCAACTCCACAGGTTGATTGGAACAAAATTGGTGGTGACTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp ATGTGTAAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCACCCCATGGATCACTaGAGCTGTATCAGGATAGTC +
Preference number: 4 (lower is better)
Translates to: MCKGGRPLGGLHGRTIGSHPMDH*SCIRIV
Trigger: GACTATCCTGATACAGCTCCAGTGATCCATGGGGTG...AGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTTACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp AAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCCCTCCGATTCCCAGTTTATTTaGAGCAAAGCAGCGGTATTT +
Preference number: 4 (lower is better)
Translates to: KGGRPLGGLHGRTIGSPSDSQFI*SKAAVF
Trigger: AAATACCGCTGCTTTGCTTCAAATAAACTGGGAATC...GGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGACTATACACAGCACTCTaGGGCTTCTTTGTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRLYTAL*GFFVQR
Trigger: TCGCTGGACAAAGAAGCCTCAGAGTGCTGTGTATAG...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACAAGTTCCATGGACATTTaGGGCTTCACACTGGTACAC +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTSSMDI*GFTLVH
Trigger: GTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACT...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGTTGCATTCAGGTTTaGGAGGTGCCAGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSSCIQV*EVPAGL
Trigger: AAGCCCAGCTGGCACCTCTCAAACCTGAATGCAACT...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACTGGAGCTTTCCTCCGTaGTCGGTTTTCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNWSFPP*SVFHSP
Trigger: AGGGCTGTGGAAAACCGATCACGGAGGAAAGCTCCA...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTTGGAGCTTTCCTCCGTaGTCGGTTTTCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLWSFPP*SVFHSP
Trigger: AGGGCTGTGGAAAACCGATCACGGAGGAAAGCTCCA...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACACTGCCTTCCCCCTTTaGAATGCTTACTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNTAFPL*NAYSRD
Trigger: GTCCCGGGAGTAAGCATTTCAAAGGGGGAAGGCAGT...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCGCTGGCTCTCGCCTCTaGTCCCTTCCTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCAGSRL*SLPGFC
Trigger: GCAGAACCCAGGAAGGGAGCAGAGGCGAGAGCCAGC...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256509.7
CDS-3UTR GCA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGATGCCATTGCTTCCGGTaGTATACACAGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRCHCFR*YTQHSE
Trigger: CTCAGAGTGCTGTGTATAGCACCGGAAGCAATGGCA...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGAAGATATGATACCGCCTaGCCTCCAGGGGTTTCACTT +
Preference number: 4 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRRYDTA*PPGVSL
Trigger: AAGTGAAACCCCTGGAGGGCAGGCGGTATCATATCT...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCAGATATGATACCGCCTaGCCTCCAGGGGTTTCACTT +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRRYDTA*PPGVSL
Trigger: AAGTGAAACCCCTGGAGGGCAGGCGGTATCATATCT...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp AAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCCCTCCAGTCCACGAAAATGTTaGTTCTGGATTTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: KGGRPLGGLHGRTIGSPSSPRKC*FWISFS
Trigger: GCTAAAGGAAATCCAGAACCAACATTTTCGTGGACT...GGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp GGTAAGTCACCACCAATTTTGTTCCAATCAACCTGTGGAGTTGGCAAGCCTTCAGCATGGGAGGACAATTaGATCTCCCTCCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GKSPPILFQSTCGVGKPSAWEDN*ISLLHF
Trigger: GAAGTGGAGGAGGGAGATCCAATTGTCCTCCCATGC...TGAAGGCTTGCCAACTCCACAGGTTGATTGGAACAAAATTGGTGGTGACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp CCCTACTTCGTTCACGGCTATGACCCTGAACTGGTATCTCACAAATGGAGCCAATTTGGGAGGATTGCATaGGAGGACAATTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PYFVHGYDPELVSHKWSQFGRIA*EDNWIS
Trigger: GGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAA...TTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACATTTGGGAGGATTGCATaGGAGGACAATTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTFGRIA*EDNWIS
Trigger: GGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAA...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCTCTTTCCTTGGACTCTaGTCAGTTCCTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRSFLGL*SVPPTF
Trigger: GAAGGTGGGAGGAACTGACCAGAGTCCAAGGAAAGA...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCCACCCCATGGATCACTaGAGCTGTATCAGGATAGTC +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRHPMDH*SCIRIV
Trigger: GACTATCCTGATACAGCTCCAGTGATCCATGGGGTG...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTGAAATCGGAGGAGGATaGAGCTCGAGTTGCACTGAT +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIEIGGG*SSSCTD
Trigger: ATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTTC...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGAGCGAGCCCGGAGAGTaGGAACGGAGGGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FSPSLVCINGRTSTTSILSEPGE*ERRGWL
Trigger: AAGCCAGCCCCTCCGTTCCCACTCTCCGGGCTCGCT...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CAA 72 bp AGAATAACACCAGAACTAAGCTCGAACGTCACAACCTaGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RITPELSSNVTT*PSSQAVHHSFL
Trigger: GAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGTGACGTTCGAGCTTAGTTCTGGTGTTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CAA 72 bp CTGGAACCAGGAAGAGAATTTGGATTTTCCCAACCCTaGGACAGTTCTCTAGGAACTCATGCCCACCAACCA +
Preference number: 4 (lower is better)
Translates to: LEPGREFGFSQP*DSSLGTHAHQP
Trigger: TGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCAAATTCTCTTCCTGGTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CAA 72 bp TATGATTTGTTTGCAGTATTAAGACAGGATTATGGTTaGCAGTTTACAGCACCTGGGCCCGCGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YDLFAVLRQDYG*QFTAPGPARLL
Trigger: CAGCAGCCGCGCGGGCCCAGGTGCTGTAAACTGCAAACCATAATCCTGTCTTAATACTGCAAACAAATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTCACTTGATTGTGGGTTaGGGTTCTCCTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSHLIVG*GSPSAS
Trigger: TGAGGCTGAAGGAGAACCTCAACCCACAATCAAGTG...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCAGTTCCATGGACATTTaGGGCTTCACACTGGTACAC +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRSSMDI*GFTLVH
Trigger: GTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACT...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CCCTACTTCGTTCACGGCTATGACCCTGAACTGGTATCTCACAAATGGAGCCAACTTCGGTGGTTCTGTTaGTCTGCAATGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: PYFVHGYDPELVSHKWSQLRWFC*SAMCHF
Trigger: AAAATGGCACATTGCAGATCAACAGAACCACCGAAG...TTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTGGCCCAGATCCTAGTTaGTTGATAGCCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLGPDPS*LIAWTL
Trigger: CAAGGTCCAGGCTATCAATCAACTAGGATCTGGGCC...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACGGCCCAGATCCTAGTTaGTTGATAGCCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNGPDPS*LIAWTL
Trigger: CAAGGTCCAGGCTATCAATCAACTAGGATCTGGGCC...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CCCTACTTCGTTCACGGCTATGACCCTGAACTGGTATCTCACAAATGGAGCCAAGTGCCAGCTGGGCTTTaGTGGAGTTGTAATGTTAAT +
Preference number: 4 (lower is better)
Translates to: PYFVHGYDPELVSHKWSQVPAGL*WSCNVN
Trigger: ATTAACATTACAACTCCATCAAAGCCCAGCTGGCAC...TTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATGGAGCTTTCCTCCGTaGTCGGTTTTCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRWSFPP*SVFHSP
Trigger: AGGGCTGTGGAAAACCGATCACGGAGGAAAGCTCCA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCCTATTCCTTTTGTGCTaGAGAGTCCCAGTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRLFLLC*RVPVVA
Trigger: GGCAACTACTGGGACTCTTCAGCACAAAAGGAATAG...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAGACAGGATTATGGTTTaGAGTTTACAGCACCTGCGC +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSDRIMV*SLQHLR
Trigger: GCGCAGGTGCTGTAAACTGCAAACCATAATCCTGTC...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256509.7
CDS-3UTR GCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCGCTTACTCCCGGGACTaGGGTCAGATCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIAYSRD*GQILSP
Trigger: TGGGCTCAGGATCTGACCGCAGTCCCGGGAGTAAGC...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAGGATGGAGCTCGAGTTaGACTGATGGATGTCTACAT +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSGWSSS*TDGCLH
Trigger: ATGTAGACATCCATCAGTGCAACTCGAGCTCCATCC...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCGGATGGAGCTCGAGTTaGACTGATGGATGTCTACAT +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRGWSSS*TDGCLH
Trigger: ATGTAGACATCCATCAGTGCAACTCGAGCTCCATCC...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp TCTTCTGTGCCATTAATTTCAAAGGCTTCTCCATCTTTACTCCAGGACAACTTCTCACTTTCTCCGTGCTaGCTCCCCACGCACACTCAC +
Preference number: 4 (lower is better)
Translates to: SSVPLISKASPSLLQDNFSLSPC*LPTHTH
Trigger: GTGAGTGTGCGTGGGGAGGCAGCACGGAGAAAGTGA...GAAGTTGTCCTGGAGTAAAGATGGAGAAGCCTTTGAAATTAATGGCACAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGGTCCGGTAAGCTCTaGGCGGATCCAGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWGSGKL*ADPGRV
Trigger: GACCCTCCCTGGATCCGCCCAGAGCTTACCGGACCC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTTTTGGGAGGATTGCATaGGAGGACAATTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIFGRIA*EDNWIS
Trigger: GGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAA...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTGTTCCAATCAACCTGTaGAGTTGGCAAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSVPINL*SWQAFS
Trigger: GCTGAAGGCTTGCCAACTCCACAGGTTGATTGGAAC...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTTGGATGATTGTCAACTaGGGAGCCATTGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIWMIVN*GAIDSP
Trigger: TGGAGAGTCAATGGCTCCCCAGTTGACAATCATCCA...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCTTGTGGATTCCTATCTaGAGCTGCTGGTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRLWIPI*SCWWCF
Trigger: GAAACACCACCAGCAGCTCCAGATAGGAATCCACAA...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAATAACGTCCACCCCATaGATCACTGGAGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSITSTP*ITGAVS
Trigger: TGATACAGCTCCAGTGATCCATGGGGTGGACGTTAT...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTATAACGTCCACCCCATaGATCACTGGAGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIITSTP*ITGAVS
Trigger: TGATACAGCTCCAGTGATCCATGGGGTGGACGTTAT...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCCAGGATGTTGACTTCTaGATGAAATCTTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRQDVDF*MKSSAS
Trigger: GCTGGCCGAAGATTTCATCCAGAAGTCAACATCCTG...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTCAACCCCACGGTCCATaGATTCCCCGCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSCLNYILKNAIIIAPILQPHGP*IPRSRL
Trigger: CAGCCTGGAGCGGGGAATCCATGGACCGTGGGGTTG...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTTTTGAGGATGGTAATTaGAGACTCACTGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIFEDGN*RLTATL
Trigger: GAGAGTGGCAGTGAGTCTTCAATTACCATCCTCAAA...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACTCACCAGCAAATGGATaGTTGTCAACTGGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNSPANG*LSTGEP
Trigger: TGGCTCCCCAGTTGACAATCATCCATTTGCTGGTGA...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATACACGACTGCCTCAGGTaGAGCAAAGAACTCGCAATG +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIHDCLR*SKELAM
Trigger: CATTGCGAGTTCTTTGCTTCACCTGAGGCAGTCGTG...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACATCAAGAACAGTTACTTaGGTTATATCGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTSRTVT*VISAAL
Trigger: CAGTGCTGCCGATATAACTCAAGTAACTGTTCTTGA...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATGTTTCATGATGGTCTaGCGGCTGGCTAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRCFMMV*RLARLT
Trigger: AGTCAGCCTAGCCAGCCGTCAGACCATCATGAAACA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGGCTGGTGGTGTTTCATaGTGGTCTGACGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRAGGVS*WSDGWL
Trigger: TAGCCAGCCGTCAGACCATCATGAAACACCACCAGC...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCAGCGATAATTTCCTTTGTCCTGGTAGGAGACATTCTCTATCTTCAAAGTCTGCTGGTGGTGTTTCATaGTGGTCTGACGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: CSDNFLCPGRRHSLSSKSAGGVS*WSDGWL
Trigger: TAGCCAGCCGTCAGACCATCATGAAACACCACCAGC...AGACTTTGAAGATAGAGAATGTCTCCTACCAGGACAAAGGAAATTATCGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGAGAATAGAGAGTCACTaGCTGAGGGTCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMRIESH*LRVRPR
Trigger: TCTGGGCCTGACCCTCAGTCAGTGACTCTCTATTCT...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAAGAATAGAGAGTCACTaGCTGAGGGTCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIRIESH*LRVRPR
Trigger: TCTGGGCCTGACCCTCAGTCAGTGACTCTCTATTCT...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTTTTTCCACAGCCCTGTaGAGTGCAAGCCCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLFSTAL*SASPQV
Trigger: TACTTGAGGGCTTGCACTTCACAGGGCTGTGGAAAA...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAACTGCGGTCAGATCCTaGGCCCATAAATTACAGTTT +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSTAVRS*AHKLQF
Trigger: AAACTGTAATTTATGGGCTCAGGATCTGACCGCAGT...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCAGAAATTGCTGGCTGTaGAGCGATAATTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLRNCWL*SDNFLC
Trigger: ACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCT...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCCTGTTCCCAAGAAATTaGTGGCTGTGCAGCGATAAT +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRLFPRN*WLCSDN
Trigger: ATTATCGCTGCACAGCCAGCAATTTCTTGGGAACAG...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACAGATATGATACCGCCTaGCCTCCAGGGGTTTCACTT +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNRYDTA*PPGVSL
Trigger: AAGTGAAACCCCTGGAGGGCAGGCGGTATCATATCT...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp GGTAAGTCACCACCAATTTTGTTCCAATCAACCTGTGGAGTTGGCAAGCCTTCACACAGCCCTGTGAAGTaGAAGCCCTCAAGTAGAATT +
Preference number: 4 (lower is better)
Translates to: GKSPPILFQSTCGVGKPSHSPVK*KPSSRI
Trigger: AATTCTACTTGAGGGCTTGCACTTCACAGGGCTGTG...TGAAGGCTTGCCAACTCCACAGGTTGATTGGAACAAAATTGGTGGTGACTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCGCACTTTCAGTAGGCTaGATATCCCTATTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRALSVG*ISLLRD
Trigger: GTCCCTTAATAGGGATATGCAGCCTACTGAAAGTGC...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACACACGAGTGGGCAATTTaGAAACAAGCATCACCAATT +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTHEWAI*KQASPI
Trigger: AATTGGTGATGCTTGTTTGCAAATTGCCCACTCGTG...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp TTGGCATTGGCAAGGATAGTTCCATGGACATTTGAGGCTTCACACTGGTACACAGACAGGATTATGGTTTaGAGTTTACAGCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: LALARIVPWTFEASHWYTDRIMV*SLQHLG
Trigger: GCCCAGGTGCTGTAAACTGCAAACCATAATCCTGTC...TGTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACTATCCTTGCCAATGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCACGTGAAAATCGTGAGTaGCTGTTCCCAAGAAATTGC +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSRENRE*LFPRNC
Trigger: GCAATTTCTTGGGAACAGCCACTCACGATTTTCACG...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTGTGGTTTTCTTTCCTTaGACTCTGGTCAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSVVFFP*TLVSSS
Trigger: GGAGGAACTGACCAGAGTCCAAGGAAAGAAAACCAC...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CCCTACTTCGTTCACGGCTATGACCCTGAACTGGTATCTCACAAATGGAGCCAAAACCCTTATGTTTTGTaGATTCCTATCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PYFVHGYDPELVSHKWSQNPYVL*IPIWSC
Trigger: GCAGCTCCAGATAGGAATCCACAAAACATAAGGGTT...TTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp TGTTCCCAAGAAATTGCTGGCTGTGCAGCGATAATTTCCTTTGTCCTGGTAGGAGTCCATTCTGCTCCATaGATTTCAAAGGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: CSQEIAGCAAIISFVLVGVHSAP*ISKAPT
Trigger: AGTGGGAGCCTTTGAAATCCATGGAGCAGAATGGAC...TCCTACCAGGACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCCACTGGGGCTCCCTGTaGCTTCCAGGTCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCHWGSL*LPGHSV
Trigger: TACAGAGTGACCTGGAAGCCACAGGGAGCCCCAGTG...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACCACCCCATGGATCACTaGAGCTGTATCAGGATAGTC +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNHPMDH*SCIRIV
Trigger: GACTATCCTGATACAGCTCCAGTGATCCATGGGGTG...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
3UTR CAA 72 bp CATTTCCTTGGGTTGAGAGGCTTGAACCCTTATGTTTaGTGGATTCCTATCTGGAGCTGCTGGTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: HFLGLRGLNPYV*WIPIWSCWWCF
Trigger: GAAACACCACCAGCAGCTCCAGATAGGAATCCACAAAACATAAGGGTTCAAGCCTCTCAACCCAAGGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp ATGTGTAAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTTGGAACCTGTTGAACTaGAGATGGTATTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: MCKGGRPLGGLHGRTIGSWNLLN*RWYFNC
Trigger: GCAATTGAAATACCATCTTCAGTTCAACAGGTTCCA...AGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTTACACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp TTTGTGGATTCCTATCTGGAGCTGCTGGTGGTGTTTCATGATGGTCTGACGGCTGGCAACTTGGACTTTTaGCTGTTTTATGATTGTTGG +
Preference number: 4 (lower is better)
Translates to: FVDSYLELLVVFHDGLTAGNLDF*LFYDCW
Trigger: CCAACAATCATAAAACAGTCAAAAGTCCAAGTTGCC...AGCCGTCAGACCATCATGAAACACCACCAGCAGCTCCAGATAGGAATCCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCTATACACAGCACTCTaGGGCTTCTTTGTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMLYTAL*GFFVQR
Trigger: TCGCTGGACAAAGAAGCCTCAGAGTGCTGTGTATAG...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TCTTCTGTGCCATTAATTTCAAAGGCTTCTCCATCTTTACTCCAGGACAACTTCCACGACTGCCTCAGGTaGAGCAAAGAACTCGCAATG +
Preference number: 4 (lower is better)
Translates to: SSVPLISKASPSLLQDNFHDCLR*SKELAM
Trigger: CATTGCGAGTTCTTTGCTTCACCTGAGGCAGTCGTG...GAAGTTGTCCTGGAGTAAAGATGGAGAAGCCTTTGAAATTAATGGCACAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTCTTCGGTGGTTCTGTTaGTCTGCAATGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSLRWFC*SAMCHF
Trigger: AAAATGGCACATTGCAGATCAACAGAACCACCGAAG...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTATTTTCTACCCAACATaGGTAAGACCCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIIFYPT*VRPSIF
Trigger: GAAGATGCTGGGTCTTACTCATGTTGGGTAGAAAAT...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGAGAATAGAGAGTCACTaGCTGAGGGTCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRRIESH*LRVRPR
Trigger: TCTGGGCCTGACCCTCAGTCAGTGACTCTCTATTCT...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTGTGCCAGCTGGGCTTTaGTGGAGTTGTAATGTTAAT +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSVPAGL*WSCNVN
Trigger: ATTAACATTACAACTCCATCAAAGCCCAGCTGGCAC...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGTTTTCCACAGCCCTGTaGAGTGCAAGCCCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMFSTAL*SASPQV
Trigger: TACTTGAGGGCTTGCACTTCACAGGGCTGTGGAAAA...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCTCTATACATTCTGGATaGCTCGTGAGGTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRSIHSG*LVRFKR
Trigger: CCTTTTGAACCTCACGAGTCATCCAGAATGTATAGA...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGCAGTTTACAGCACCTaGGCCGCCTCCGAAACGCGA +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWAVYST*AASETR
Trigger: TCGCGTTTCGGAGGCGGCGCAGGTGCTGTAAACTGC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR GCA 90 bp TTGGCATTGGCAAGGATAGTTCCATGGACATTTGAGGCTTCACACTGGTACACACTGTTCCCAAGAAATTaGTGGCTGTGCAGCGATAAT +
Preference number: 4 (lower is better)
Translates to: LALARIVPWTFEASHWYTLFPRN*WLCSDN
Trigger: ATTATCGCTGCACAGCCAGCAATTTCTTGGGAACAG...TGTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACTATCCTTGCCAATGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATATGCCATTGCTTCCGGTaGTATACACAGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRICHCFR*YTQHSE
Trigger: CTCAGAGTGCTGTGTATAGCACCGGAAGCAATGGCA...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCATAACAAGATGCCATTaGTTCCGGTGCTATACACAG +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRITRCH*FRCYTQ
Trigger: CTGTGTATAGCACCGGAAGCAATGGCATCTTGTTAT...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAATAACAAGATGCCATTaGTTCCGGTGCTATACACAG +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSITRCH*FRCYTQ
Trigger: CTGTGTATAGCACCGGAAGCAATGGCATCTTGTTAT...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp GGTAAGTCACCACCAATTTTGTTCCAATCAACCTGTGGAGTTGGCAAGCCTTCACCTCACATAACAAGATaGCATTGCTTCCGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: GKSPPILFQSTCGVGKPSPHITR*HCFRCY
Trigger: ATAGCACCGGAAGCAATGGCATCTTGTTATGTGAGG...TGAAGGCTTGCCAACTCCACAGGTTGATTGGAACAAAATTGGTGGTGACTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTATTCCTATCTGGAGCTaGTGGTGGTGTTTCATGATG +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSIPIWS*WWCFMM
Trigger: CATCATGAAACACCACCAGCAGCTCCAGATAGGAAT...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCACATATGTTGTGTTTATaGCCGAAGGGGAAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSHMLCL*PKGKSC
Trigger: GCAACTTTTCCCCTTCGGGCATAAACACAACATATG...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAACACTGCCACTCTCAGTaGGAGGCAACAGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKHCHSQ*EATAVW
Trigger: CCAAACTGCTGTTGCCTCCCACTGAGAGTGGCAGTG...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTTTCCCAAGAAATTGCTaGCTGTGCAGCGATAATTTC +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIFPRNC*LCSDNF
Trigger: GAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAA...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACTTGTGGATTCCTATCTaGAGCTGCTGGTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNLWIPI*SCWWCF
Trigger: GAAACACCACCAGCAGCTCCAGATAGGAATCCACAA...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCATCACCCGCAATGTGTaGTTTGTGACTGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRITRNV*FVTVSS
Trigger: AGAAGAAACAGTCACAAACCACACATTGCGGGTGAT...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACAGTCCCCAAGATAAAGTaGCAGTGTCTTTATCAACTT +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTVPKIK*QCLYQL
Trigger: AAGTTGATAAAGACACTGCCACTTTATCTTGGGGAC...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGTCACTGAAGAGACCATaGTCTCCCTCTCCGTATTCG +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMSLKRP*SPSPYS
Trigger: CGAATACGGAGAGGGAGACCATGGTCTCTTCAGTGA...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CATATAAACCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTGAAAAATGCTGCTCCTCCGGCCCGTaGTTTTTCGCAGGAGTTCCC +
Preference number: 4 (lower is better)
Translates to: HINQHILSLLSQLHLEKCCSSGP*FFAGVP
Trigger: GGGAACTCCTGCGAAAAACCACGGGCCGGAGGAGCA...GCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGGTTTATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CAA 72 bp CCTTCAGCAAAACACTCAAGCAGCAAGATTTCCCCTTaGAGGATGGTAATTGAAGACTCACTGCCACTCTCA +
Preference number: 4 (lower is better)
Translates to: PSAKHSSSKISP*RMVIEDSLPLS
Trigger: TGAGAGTGGCAGTGAGTCTTCAATTACCATCCTCAAAGGGGAAATCTTGCTGCTTGAGTGTTTTGCTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAGGCAACTTGGACTTTTaGCTGTTTTATGATTGTTGG +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSGNLDF*LFYDCW
Trigger: CCAACAATCATAAAACAGTCAAAAGTCCAAGTTGCC...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCTTATCCGATGGTCAGTaGAATAAAAAGGGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRLSDGQ*NKKGCH
Trigger: ATGGCAACCCTTTTTATTTCACTGACCATCGGATAA...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ATGTGTAAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTGATCCTGAATGTTCCTaGATTGTTCGATGGAATTAT +
Preference number: 4 (lower is better)
Translates to: MCKGGRPLGGLHGRTIGSDPECS*IVRWNY
Trigger: ATAATTCCATCGAACAATTCAGGAACATTCAGGATC...AGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTTACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAGATTCCCAGTTTATTTaGAGCAAAGCAGCGGTATTT +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSDSQFI*SKAAVF
Trigger: AAATACCGCTGCTTTGCTTCAAATAAACTGGGAATC...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTTGGGTTTTCTTTGCTTaGTGGAATTTGCCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSWVFFA*WNLPWN
Trigger: GTTCCAAGGCAAATTCCATCAAGCAAAGAAAACCCA...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAACACGACTGCCTCAGGTaGAGCAAAGAACTCGCAATG +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKHDCLR*SKELAM
Trigger: CATTGCGAGTTCTTTGCTTCACCTGAGGCAGTCGTG...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCCACGACTGCCTCAGGTaGAGCAAAGAACTCGCAATG +
Preference number: 4 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIHDCLR*SKELAM
Trigger: CATTGCGAGTTCTTTGCTTCACCTGAGGCAGTCGTG...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTCTTCGGTGGTTCTGTTaGTCTGCAATGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLLRWFC*SAMCHF
Trigger: AAAATGGCACATTGCAGATCAACAGAACCACCGAAG...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTTGTCTTTCAGACAAGTaGAGGTTTTCTGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLCLSDK*RFSGGS
Trigger: GGATCCACCAGAAAACCTTCACTTGTCTGAAAGACA...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGACGGCTGGCTAGGCTaGCTTCTCCCTACTTCGTTC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWDGWLG*LLPTSF
Trigger: GAACGAAGTAGGGAGAAGTCAGCCTAGCCAGCCGTC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAGTTGCATTCAGGTTTaGGAGGTGCCAGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWSCIQV*EVPAGL
Trigger: AAGCCCAGCTGGCACCTCTCAAACCTGAATGCAACT...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCAGTTGCATTCAGGTTTaGGAGGTGCCAGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCSCIQV*EVPAGL
Trigger: AAGCCCAGCTGGCACCTCTCAAACCTGAATGCAACT...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACATTAATAATAGTAGTGTaGGAAGAGCAATCGCACACA +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTLIIVV*EEQSHT
Trigger: TGTGTGCGATTGCTCTTCTCACACTACTATTATTAA...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTGGTTTCATCTTTTACTaGCTGAATTTCTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSGFIFY*LNFWVW
Trigger: CCAGACCCAGAAATTCAGTCAGTAAAAGATGAAACC...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGATGATCCATCTTCACTaGAGAGACCATGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMMIHLH*RDHGLP
Trigger: AGGGAGACCATGGTCTCTTCAGTGAAGATGGATCAT...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGGAGCTCGAGTTGCACTaGTGGATGTCTACATCCTCA +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRELELH*WMSTSS
Trigger: TGAGGATGTAGACATCCATCAGTGCAACTCGAGCTC...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACAAAAAAGGTAATCACGTaGACCTGTTCTACATACCTT +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTKKVIT*TCSTYL
Trigger: AAGGTATGTAGAACAGGTTCACGTGATTACCTTTTT...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACCCTCACATAACAAGATaGCATTGCTTCCGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNPHITR*HCFRCY
Trigger: ATAGCACCGGAAGCAATGGCATCTTGTTATGTGAGG...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACACAAATTGGCTGTGACTaGAGTTTTTCCTATAGCATT +
Preference number: 4 (lower is better)
Translates to: KSEEDGARVALMDVYILTQIGCD*SFSYSI
Trigger: AATGCTATAGGAAAAACTGCAGTCACAGCCAATTTG...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCACAGCCCTGTGAAGTaGAAGCCCTCAAGTAGAATT +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMHSPVK*KPSSRI
Trigger: AATTCTACTTGAGGGCTTGCACTTCACAGGGCTGTG...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGACACAGCCCTGTGAAGTaGAAGCCCTCAAGTAGAATT +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRHSPVK*KPSSRI
Trigger: AATTCTACTTGAGGGCTTGCACTTCACAGGGCTGTG...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACGCACTTTCAGTAGGCTaGATATCCCTATTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNALSVG*ISLLRD
Trigger: GTCCCTTAATAGGGATATGCAGCCTACTGAAAGTGC...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTCATATGTTGTGTTTATaGCCGAAGGGGAAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSHMLCL*PKGKSC
Trigger: GCAACTTTTCCCCTTCGGGCATAAACACAACATATG...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCACAATGGGCACTTTCTaGCTGTTCTCGTATAAAACA +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRTMGTF*LFSYKT
Trigger: TGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGT...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTGGACTGGAGCACAACTaGCAGAAAATAAATTCCCTG +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLGLEHN*QKINSL
Trigger: CAGGGAATTTATTTTCTGGCAGTTGTGCTCCAGTCC...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAAGTAGATATTCCATGTaGATTCCTGCGCTGACTATT +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSSRYSM*IPALTI
Trigger: AATAGTCAGCGCAGGAATGCACATGGAATATCTACT...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCCCTCCTCACAAGCTGTaGACCACAGTTTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIPPHKL*TTVFSQ
Trigger: CTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGG...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TTTGTGGATTCCTATCTGGAGCTGCTGGTGGTGTTTCATGATGGTCTGACGGCTAAGGGAAAGGCAACTTaGACTTTTGACTGTTTTATG +
Preference number: 4 (lower is better)
Translates to: FVDSYLELLVVFHDGLTAKGKAT*TFDCFM
Trigger: CATAAAACAGTCAAAAGTCCAAGTTGCCTTTCCCTT...AGCCGTCAGACCATCATGAAACACCACCAGCAGCTCCAGATAGGAATCCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATTTGGGAGGATTGCATaGGAGGACAATTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRFGRIA*EDNWIS
Trigger: GGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTAAGGTGGGAGGCCTTTaGGAGGATTGCATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PSCLNYILKNAIIIAPILKVGGL*EDCMGG
Trigger: TCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTT...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGGTTCCAATCAACCTGTaGAGTTGGCAAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRVPINL*SWQAFS
Trigger: GCTGAAGGCTTGCCAACTCCACAGGTTGATTGGAAC...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GTTTTCTGGTGGATCCGGAACATCAAGAACAGTTACTTGAGTTATATCGGCAGCCGTGAAAATCGTGAGTaGCTGTTCCCAAGAAATTGC +
Preference number: 4 (lower is better)
Translates to: VFWWIRNIKNSYLSYIGSRENRE*LFPRNC
Trigger: GCAATTTCTTGGGAACAGCCACTCACGATTTTCACG...GCTGCCGATATAACTCAAGTAACTGTTCTTGATGTTCCGGATCCACCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATGGATGATTGTCAACTaGGGAGCCATTGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRWMIVN*GAIDSP
Trigger: TGGAGAGTCAATGGCTCCCCAGTTGACAATCATCCA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAACATCACCAGCAAATaGATGATTGTCAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSNITSK*MIVNWG
Trigger: TCCCCAGTTGACAATCATCCATTTGCTGGTGATGTT...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CCCTACTTCGTTCACGGCTATGACCCTGAACTGGTATCTCACAAATGGAGCCAACACAGCAGTATGATTTaGTTGAAGGTTGGTAAAACT +
Preference number: 4 (lower is better)
Translates to: PYFVHGYDPELVSHKWSQHSSMI*LKVGKT
Trigger: AGTTTTACCAACCTTCAACCAAATCATACTGCTGTG...TTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGATTTGGTTTGTATCAATaGACGGACATCCACAACATC +
Preference number: 4 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRFGLYQ*TDIHNI
Trigger: GATGTTGTGGATGTCCGTCCATTGATACAAACCAAA...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTGTGAAGGTTTTCTGGTaGATCCGGAACATCAAGAAC +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLVKVFW*IRNIKN
Trigger: GTTCTTGATGTTCCGGATCCACCAGAAAACCTTCAC...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp ACATTAGATATACGATTAGTCCTCTTCCAAGTAAAAGCGGCTCCATTGCTCTTCTCTTTCCTTGGACTCTaGTCAGTTCCTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: TLDIRLVLFQVKAAPLLFSFLGL*SVPPTF
Trigger: GAAGGTGGGAGGAACTGACCAGAGTCCAAGGAAAGA...GAAGAGCAATGGAGCCGCTTTTACTTGGAAGAGGACTAATCGTATATCTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAACCCTTATGTTTTGTaGATTCCTATCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSNPYVL*IPIWSC
Trigger: GCAGCTCCAGATAGGAATCCACAAAACATAAGGGTT...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTACACTGGGGCTCCCTGTaGCTTCCAGGTCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLHWGSL*LPGHSV
Trigger: TACAGAGTGACCTGGAAGCCACAGGGAGCCCCAGTG...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACCACTGGGGCTCCCTGTaGCTTCCAGGTCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYHWGSL*LPGHSV
Trigger: TACAGAGTGACCTGGAAGCCACAGGGAGCCCCAGTG...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGATAACGTCCACCCCATaGATCACTGGAGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMITSTP*ITGAVS
Trigger: TGATACAGCTCCAGTGATCCATGGGGTGGACGTTAT...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAGAATGTTCACTTCTTTaGGATGTGTTCTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSECSLL*DVFFHP
Trigger: TGGATGGAAGAACACATCCCAAAGAAGTGAACATTC...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCCTGAATTTCTGGGTCTaGATGCAAATCTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRLNFWV*MQIFLF
Trigger: GAAAAGGAAGATTTGCATCCAGACCCAGAAATTCAG...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTATAAATATGGAAGGTTaGGGTGAACCAGTAGCGTTG +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSINMEG*GEPVAL
Trigger: CAACGCTACTGGTTCACCCCAACCTTCCATATTTAT...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTAAATATGACCATCTCTaGGCAAATAGGAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIKYDHL*ANRSST
Trigger: TGTTGAGCTCCTATTTGCCCAGAGATGGTCATATTT...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTTTGACTTATCACGAGTaGGCAATTTGCAAACAAGCA +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTILTYHE*AICKQA
Trigger: TGCTTGTTTGCAAATTGCCCACTCGTGATAAGTCAA...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CAA 72 bp TTTGTTTCTCTCCCCTTTGGTAAGTCACCACCAATTTaGTTCCAATCAACCTGTGGAGTTGGCAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FVSLPFGKSPPI*FQSTCGVGKPS
Trigger: TGAAGGCTTGCCAACTCCACAGGTTGATTGGAACAAAATTGGTGGTGACTTACCAAAGGGGAGAGAAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTATTGTTGGAACCTGTTaGACTGAAGATGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIIVGTC*TEDGIS
Trigger: TGAAATACCATCTTCAGTTCAACAGGTTCCAACAAT...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTTTATCCGATGGTCAGTaGAATAAAAAGGGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSLSDGQ*NKKGCH
Trigger: ATGGCAACCCTTTTTATTTCACTGACCATCGGATAA...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATATTTGAGGATGGTAATTaGAGACTCACTGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIFEDGN*RLTATL
Trigger: GAGAGTGGCAGTGAGTCTTCAATTACCATCCTCAAA...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGTTTGAGGATGGTAATTaGAGACTCACTGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMFEDGN*RLTATL
Trigger: GAGAGTGGCAGTGAGTCTTCAATTACCATCCTCAAA...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAACTATACACAGCACTCTaGGGCTTCTTTGTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKLYTAL*GFFVQR
Trigger: TCGCTGGACAAAGAAGCCTCAGAGTGCTGTGTATAG...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGCACTTGATTGTGGGTTaGGGTTCTCCTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWHLIVG*GSPSAS
Trigger: TGAGGCTGAAGGAGAACCTCAACCCACAATCAAGTG...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CCAACAGACTTTTTGTTTTCCACCAATTTATCTGATAGCCTTTCAGACGTCCATCACTTGATTGTGGGTTaGGGTTCTCCTTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PTDFLFSTNLSDSLSDVHHLIVG*GSPSAS
Trigger: TGAGGCTGAAGGAGAACCTCAACCCACAATCAAGTG...ATGGACGTCTGAAAGGCTATCAGATAAATTGGTGGAAAACAAAAAGTCTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGTGTCTTTCAGACAAGTaGAGGTTTTCTGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMCLSDK*RFSGGS
Trigger: GGATCCACCAGAAAACCTTCACTTGTCTGAAAGACA...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACGCTGGTGGTGTTTCATaGTGGTCTGACGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYAGGVS*WSDGWL
Trigger: TAGCCAGCCGTCAGACCATCATGAAACACCACCAGC...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CTTCACATTCAATTTGAAAATACTCATCGAAGGGAAAGGCAACTTGGACTTTTGGGCCCAGATCCTAGTTaGTTGATAGCCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: LHIQFENTHRRERQLGLLGPDPS*LIAWTL
Trigger: CAAGGTCCAGGCTATCAATCAACTAGGATCTGGGCC...CAAAAGTCCAAGTTGCCTTTCCCTTCGATGAGTATTTTCAAATTGAATGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGGTGCCAGCTGGGCTTTaGTGGAGTTGTAATGTTAAT +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMVPAGL*WSCNVN
Trigger: ATTAACATTACAACTCCATCAAAGCCCAGCTGGCAC...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGAGTTGCATTCAGGTTTaGGAGGTGCCAGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FSPSLVCINGRTSTTSILSCIQV*EVPAGL
Trigger: AAGCCCAGCTGGCACCTCTCAAACCTGAATGCAACT...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGATTAATAATAGTAGTGTaGGAAGAGCAATCGCACACA +
Preference number: 4 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRLIIVV*EEQSHT
Trigger: TGTGTGCGATTGCTCTTCTCACACTACTATTATTAA...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGTATGGAAGGTTGGGGTaGACCAGTAGCGTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWYGRLG*TSSVAY
Trigger: GTAAGCAACGCTACTGGTTCACCCCAACCTTCCATA...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCTATGGAAGGTTGGGGTaGACCAGTAGCGTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCYGRLG*TSSVAY
Trigger: GTAAGCAACGCTACTGGTTCACCCCAACCTTCCATA...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGTATAAAACAACCTTCTaGCCACCGCTTCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMYKTTF*PPLPCS
Trigger: ACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATA...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATTCTGGATGACTCGTaGGGTTCAAAAGGACAAGTA +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNILDDS*GSKGQV
Trigger: TACTTGTCCTTTTGAACCTCACGAGTCATCCAGAAT...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTTCTATACATTCTGGATaGCTCGTGAGGTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLSIHSG*LVRFKR
Trigger: CCTTTTGAACCTCACGAGTCATCCAGAATGTATAGA...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCGAGCTCGAGTTGCACTaGTGGATGTCTACATCCTCA +
Preference number: 4 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIELELH*WMSTSS
Trigger: TGAGGATGTAGACATCCATCAGTGCAACTCGAGCTC...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCTGCCATTGCTTCCGGTaGTATACACAGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCCHCFR*YTQHSE
Trigger: CTCAGAGTGCTGTGTATAGCACCGGAAGCAATGGCA...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCTTCAGGTTTGAGAGGTaGCAGCTGGGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCFRFER*QLGFDG
Trigger: TCCATCAAAGCCCAGCTGGCACCTCTCAAACCTGAA...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGCACAGCCCTGTGAAGTaGAAGCCCTCAAGTAGAATT +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRHSPVK*KPSSRI
Trigger: AATTCTACTTGAGGGCTTGCACTTCACAGGGCTGTG...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAGCACTTTCAGTAGGCTaGATATCCCTATTAAGGGAC +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIALSVG*ISLLRD
Trigger: GTCCCTTAATAGGGATATGCAGCCTACTGAAAGTGC...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTCACGAGTGGGCAATTTaGAAACAAGCATCACCAATT +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLHEWAI*KQASPI
Trigger: AATTGGTGATGCTTGTTTGCAAATTGCCCACTCGTG...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATTCTCTAGGAACTCATaGCCACCAACCATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRFSRNS*PPTILE
Trigger: CTCAAGAATGGTTGGTGGGCATGAGTTCCTAGAGAA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCTATGTACAAAATCAGTaGTGGAACCAGGAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: EQWALSACSRIKQPSDHRYVQNQ*WNQEEN
Trigger: ATTCTCTTCCTGGTTCCAGCACTGATTTTGTACATA...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTGTCTCCTCTCACTTTTaGTTTACAGCTGAGACCTTA +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLVSSHF*FTAETL
Trigger: TAAGGTCTCAGCTGTAAACCAAAAGTGAGAGGAGAC...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGCACTGCCACTCTCAGTaGGAGGCAACAGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWHCHSQ*EATAVW
Trigger: CCAAACTGCTGTTGCCTCCCACTGAGAGTGGCAGTG...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAGTTCCAATCAACCTGTaGAGTTGGCAAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKVPINL*SWQAFS
Trigger: GCTGAAGGCTTGCCAACTCCACAGGTTGATTGGAAC...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGACGTGAAAATCGTGAGTaGCTGTTCCCAAGAAATTGC +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRRENRE*LFPRNC
Trigger: GCAATTTCTTGGGAACAGCCACTCACGATTTTCACG...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GTTTTCTGGTGGATCCGGAACATCAAGAACAGTTACTTGAGTTATATCGGCAGCAACATCACCAGCAAATaGATGATTGTCAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: VFWWIRNIKNSYLSYIGSNITSK*MIVNWG
Trigger: TCCCCAGTTGACAATCATCCATTTGCTGGTGATGTT...GCTGCCGATATAACTCAAGTAACTGTTCTTGATGTTCCGGATCCACCAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGGCTATGACCCTGAACTaGTATCTCACAAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRAMTLN*YLTNGA
Trigger: GGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGC...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp ACATTAGATATACGATTAGTCCTCTTCCAAGTAAAAGCGGCTCCATTGCTCTTCGCTATGACCCTGAACTaGTATCTCACAAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: TLDIRLVLFQVKAAPLLFAMTLN*YLTNGA
Trigger: GGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGC...GAAGAGCAATGGAGCCGCTTTTACTTGGAAGAGGACTAATCGTATATCTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCCCTATCTGGAGCTGCTaGTGGTGTTTCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIPIWSC*WCFMMV
Trigger: GACCATCATGAAACACCACCAGCAGCTCCAGATAGG...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAACCTATCTGGAGCTGCTaGTGGTGTTTCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKPIWSC*WCFMMV
Trigger: GACCATCATGAAACACCACCAGCAGCTCCAGATAGG...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CCAACAGACTTTTTGTTTTCCACCAATTTATCTGATAGCCTTTCAGACGTCCATCCTATCTGGAGCTGCTaGTGGTGTTTCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: PTDFLFSTNLSDSLSDVHPIWSC*WCFMMV
Trigger: GACCATCATGAAACACCACCAGCAGCTCCAGATAGG...ATGGACGTCTGAAAGGCTATCAGATAAATTGGTGGAAAACAAAAAGTCTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp TGCAGCGATAATTTCCTTTGTCCTGGTAGGAGACATTCTCTATCTTCAAAGTCTTTGTGGATTCCTATCTaGAGCTGCTGGTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: CSDNFLCPGRRHSLSSKSLWIPI*SCWWCF
Trigger: GAAACACCACCAGCAGCTCCAGATAGGAATCCACAA...AGACTTTGAAGATAGAGAATGTCTCCTACCAGGACAAAGGAAATTATCGCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGTTGTGGATTCCTATCTaGAGCTGCTGGTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRLWIPI*SCWWCF
Trigger: GAAACACCACCAGCAGCTCCAGATAGGAATCCACAA...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACAACCCTTATGTTTTGTaGATTCCTATCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNNPYVL*IPIWSC
Trigger: GCAGCTCCAGATAGGAATCCACAAAACATAAGGGTT...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCCACCCCATGGATCACTaGAGCTGTATCAGGATAGTC +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCHPMDH*SCIRIV
Trigger: GACTATCCTGATACAGCTCCAGTGATCCATGGGGTG...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GGTAAGTCACCACCAATTTTGTTCCAATCAACCTGTGGAGTTGGCAAGCCTTCAGAATGTTCACTTCTTTaGGATGTGTTCTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: GKSPPILFQSTCGVGKPSECSLL*DVFFHP
Trigger: TGGATGGAAGAACACATCCCAAAGAAGTGAACATTC...TGAAGGCTTGCCAACTCCACAGGTTGATTGGAACAAAATTGGTGGTGACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp TGTTCCCAAGAAATTGCTGGCTGTGCAGCGATAATTTCCTTTGTCCTGGTAGGAGTCCCCAAGATAAAGTaGCAGTGTCTTTATCAACTT +
Preference number: 4 (lower is better)
Translates to: CSQEIAGCAAIISFVLVGVPKIK*QCLYQL
Trigger: AAGTTGATAAAGACACTGCCACTTTATCTTGGGGAC...TCCTACCAGGACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGTCACTGAAGAGACCATaGTCTCCCTCTCCGTATTCG +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWSLKRP*SPSPYS
Trigger: CGAATACGGAGAGGGAGACCATGGTCTCTTCAGTGA...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCTCACTGAAGAGACCATaGTCTCCCTCTCCGTATTCG +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCSLKRP*SPSPYS
Trigger: CGAATACGGAGAGGGAGACCATGGTCTCTTCAGTGA...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTATAAATATGGAAGGTTaGGGTGAACCAGTAGCGTTG +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLINMEG*GEPVAL
Trigger: CAACGCTACTGGTTCACCCCAACCTTCCATATTTAT...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACTTTCTTTTGAGGGGCTaGGGTAGATGTACATTCAAC +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNFLLRG*GRCTFN
Trigger: GTTGAATGTACATCTACCCCAGCCCCTCAAAAGAAA...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATACCATTGCACGCCGTaGACTCTGTTACTCATTTTC +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRYHCTP*TLLLIF
Trigger: GAAAATGAGTAACAGAGTCCACGGCGTGCAATGGTA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CAA 72 bp ATCAATGGACGGACATCCACAACATCAATATTGGCATaGGCAAGGATAGTTCCATGGACATTTGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: INGRTSTTSILA*ARIVPWTFEAS
Trigger: TGAAGCCTCAAATGTCCATGGAACTATCCTTGCCAATGCCAATATTGATGTTGTGGATGTCCGTCCATTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTTGGAACCTGTTGAACTaGAGATGGTATTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLWNLLN*RWYFNC
Trigger: GCAATTGAAATACCATCTTCAGTTCAACAGGTTCCA...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ACATTAGATATACGATTAGTCCTCTTCCAAGTAAAAGCGGCTCCATTGCTCTTCTTTGAGGATGGTAATTaGAGACTCACTGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: TLDIRLVLFQVKAAPLLFFEDGN*RLTATL
Trigger: GAGAGTGGCAGTGAGTCTTCAATTACCATCCTCAAA...GAAGAGCAATGGAGCCGCTTTTACTTGGAAGAGGACTAATCGTATATCTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAGTTCCATGGACATTTaGGGCTTCACACTGGTACAC +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWSSMDI*GFTLVH
Trigger: GTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACT...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCAGCGATAATTTCCTTTGTCCTGGTAGGAGACATTCTCTATCTTCAAAGTCTTGTCTTTCAGACAAGTaGAGGTTTTCTGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: CSDNFLCPGRRHSLSSKSCLSDK*RFSGGS
Trigger: GGATCCACCAGAAAACCTTCACTTGTCTGAAAGACA...AGACTTTGAAGATAGAGAATGTCTCCTACCAGGACAAAGGAAATTATCGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp CATATAAACCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTGAAAAATGCTGTTTCATGATGGTCTaGCGGCTGGCTAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: HINQHILSLLSQLHLEKCCFMMV*RLARLT
Trigger: AGTCAGCCTAGCCAGCCGTCAGACCATCATGAAACA...GCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGGTTTATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTATGTTTCATGATGGTCTaGCGGCTGGCTAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLCFMMV*RLARLT
Trigger: AGTCAGCCTAGCCAGCCGTCAGACCATCATGAAACA...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCCAATAAACCAGCCTTaGGTGGAGATGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMPINQP*VEMSSY
Trigger: ATATGATGACATCTCCACTCAAGGCTGGTTTATTGG...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAGGTTTCATCTTTTACTaGCTGAATTTCTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIGFIFY*LNFWVW
Trigger: CCAGACCCAGAAATTCAGTCAGTAAAAGATGAAACC...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAACCGAAGGCTTCCTTTaGGAGGCTTTTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKTEGFL*EAFHHC
Trigger: ACAGTGATGAAAAGCCTCTCAAAGGAAGCCTTCGGT...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCACCGAAGGCTTCCTTTaGGAGGCTTTTCATCACTGT +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCTEGFL*EAFHHC
Trigger: ACAGTGATGAAAAGCCTCTCAAAGGAAGCCTTCGGT...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCATGATCCATCTTCACTaGAGAGACCATGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCMIHLH*RDHGLP
Trigger: AGGGAGACCATGGTCTCTTCAGTGAAGATGGATCAT...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGATGATCCATCTTCACTaGAGAGACCATGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWMIHLH*RDHGLP
Trigger: AGGGAGACCATGGTCTCTTCAGTGAAGATGGATCAT...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACTTAAATATTGGCTGTTaGCTTATCACGAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNLNIGC*LITSGQ
Trigger: TTGCCCACTCGTGATAAGTCAACAGCCAATATTTAA...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTTTGCTTGATGGAATTTaGCTTGGAACCAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSLLDGI*LGTNFC
Trigger: ACAGAAATTGGTTCCAAGGCAAATTCCATCAAGCAA...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACAGAAATTGCTGGCTGTaGAGCGATAATTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNRNCWL*SDNFLC
Trigger: ACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCT...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGCTGTTCCCAAGAAATTaGTGGCTGTGCAGCGATAAT +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRLFPRN*WLCSDN
Trigger: ATTATCGCTGCACAGCCAGCAATTTCTTGGGAACAG...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAATAACAAGATGCCATTaGTTCCGGTGCTATACACAG +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIITRCH*FRCYTQ
Trigger: CTGTGTATAGCACCGGAAGCAATGGCATCTTGTTAT...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGCCTCACATAACAAGATaGCATTGCTTCCGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRPHITR*HCFRCY
Trigger: ATAGCACCGGAAGCAATGGCATCTTGTTATGTGAGG...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTCAAATTGGCTGTGACTaGAGTTTTTCCTATAGCATT +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSQIGCD*SFSYSI
Trigger: AATGCTATAGGAAAAACTGCAGTCACAGCCAATTTG...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTTTCAGGTTTGAGAGGTaGCAGCTGGGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: PSCLNYILKNAIIIAPILFRFER*QLGFDG
Trigger: TCCATCAAAGCCCAGCTGGCACCTCTCAAACCTGAA...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGACATATGTTGTGTTTATaGCCGAAGGGGAAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRHMLCL*PKGKSC
Trigger: GCAACTTTTCCCCTTCGGGCATAAACACAACATATG...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTAGTAGATATTCCATGTaGATTCCTGCGCTGACTATT +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLSRYSM*IPALTI
Trigger: AATAGTCAGCGCAGGAATGCACATGGAATATCTACT...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTACCTCCTCACAAGCTGTaGACCACAGTTTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLPPHKL*TTVFSQ
Trigger: CTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGG...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTTATGTACAAAATCAGTaGTGGAACCAGGAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSYVQNQ*WNQEEN
Trigger: ATTCTCTTCCTGGTTCCAGCACTGATTTTGTACATA...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTAGTCCACGAAAATGTTaGTTCTGGATTTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLSPRKC*FWISFS
Trigger: GCTAAAGGAAATCCAGAACCAACATTTTCGTGGACT...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACGCATGGGAGGACAATTaGATCTCCCTCCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYAWEDN*ISLLHF
Trigger: GAAGTGGAGGAGGGAGATCCAATTGTCCTCCCATGC...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGCATGGGAGGACAATTaGATCTCCCTCCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWAWEDN*ISLLHF
Trigger: GAAGTGGAGGAGGGAGATCCAATTGTCCTCCCATGC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CTTCACATTCAATTTGAAAATACTCATCGAAGGGAAAGGCAACTTGGACTTTTGGTTCCAATCAACCTGTaGAGTTGGCAAGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LHIQFENTHRRERQLGLLVPINL*SWQAFS
Trigger: GCTGAAGGCTTGCCAACTCCACAGGTTGATTGGAAC...CAAAAGTCCAAGTTGCCTTTCCCTTCGATGAGTATTTTCAAATTGAATGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTAATTTTCTCCATCTTTaGTTTGTATCAATGGACGGA +
Preference number: 4 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTINFLHL*FVSMDG
Trigger: TCCGTCCATTGATACAAACCAAAGATGGAGAAAATT...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCGTGGTTTTCTTTCCTTaGACTCTGGTCAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCVVFFP*TLVSSS
Trigger: GGAGGAACTGACCAGAGTCCAAGGAAAGAAAACCAC...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAGCTATGACCCTGAACTaGTATCTCACAAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKAMTLN*YLTNGA
Trigger: GGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGC...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCGCTATGACCCTGAACTaGTATCTCACAAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCAMTLN*YLTNGA
Trigger: GGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGC...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCGTCCATTCTGCTCCATaGATTTCAAAGGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCVHSAP*ISKAPT
Trigger: AGTGGGAGCCTTTGAAATCCATGGAGCAGAATGGAC...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACGTCCCCAAGATAAAGTaGCAGTGTCTTTATCAACTT +
Preference number: 4 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNVPKIK*QCLYQL
Trigger: AAGTTGATAAAGACACTGCCACTTTATCTTGGGGAC...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTCTCAAATACCTCTATTaGGTGAGTCTTTTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSLKYLY*VSLLSK
Trigger: CTTACTCAAAAGACTCACCCAATAGAGGTATTTGAG...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGTTTCTTTTGAGGGGCTaGGGTAGATGTACATTCAAC +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMFLLRG*GRCTFN
Trigger: GTTGAATGTACATCTACCCCAGCCCCTCAAAAGAAA...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCCTGTCTATACATTCTaGATGACTCGTGAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMPVYTF*MTREVQ
Trigger: TTGAACCTCACGAGTCATCCAGAATGTATAGACAGG...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAACCAGGAAGAGAATTTaGATTTTCCCAACCCTTGGA +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRITRKRI*IFPTLG
Trigger: TCCAAGGGTTGGGAAAATCCAAATTCTCTTCCTGGT...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAAAACAAAGAAAGCTTTaGCTGAACCCTACTTATTTC +
Preference number: 4 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSKQRKL*LNPTYF
Trigger: GAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTT...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CAA 72 bp AACAGTAGTCATTGCGACTGTCCTTTTCTTCCACGTTaGCGAAGTATAGATCTCCCTTTTGGCTCATGTATA +
Preference number: 4 (lower is better)
Translates to: NSSHCDCPFLPR*RSIDLPFGSCI
Trigger: TATACATGAGCCAAAAGGGAGATCTATACTTCGCAAACGTGGAAGAAAAGGACAGTCGCAATGACTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CAA 72 bp GTTTGTATCAATGGACGGACATCCACAACATCAATATaGGCATTGGCAAGGATAGTTCCATGGACATTTGAG +
Preference number: 4 (lower is better)
Translates to: VCINGRTSTTSI*ALARIVPWTFE
Trigger: CTCAAATGTCCATGGAACTATCCTTGCCAATGCCAATATTGATGTTGTGGATGTCCGTCCATTGATACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGGGCAACTTGGACTTTTaGCTGTTTTATGATTGTTGG +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMGNLDF*LFYDCW
Trigger: CCAACAATCATAAAACAGTCAAAAGTCCAAGTTGCC...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGGATTCCCAGTTTATTTaGAGCAAAGCAGCGGTATTT +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMDSQFI*SKAAVF
Trigger: AAATACCGCTGCTTTGCTTCAAATAAACTGGGAATC...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTACTATACACAGCACTCTaGGGCTTCTTTGTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLLYTAL*GFFVQR
Trigger: TCGCTGGACAAAGAAGCCTCAGAGTGCTGTGTATAG...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACTCACCAGCAAATGGATaGTTGTCAACTGGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYSPANG*LSTGEP
Trigger: TGGCTCCCCAGTTGACAATCATCCATTTGCTGGTGA...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GTTTTCTGGTGGATCCGGAACATCAAGAACAGTTACTTGAGTTATATCGGCAGCACTGTGTTTCAAATGTaGGTCACATTTGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: VFWWIRNIKNSYLSYIGSTVFQM*VTFAFT
Trigger: TGTGAAAGCAAATGTGACTCACATTTGAAACACAGT...GCTGCCGATATAACTCAAGTAACTGTTCTTGATGTTCCGGATCCACCAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp ACATTAGATATACGATTAGTCCTCTTCCAAGTAAAAGCGGCTCCATTGCTCTTCTCAAGAACAGTTACTTaGGTTATATCGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: TLDIRLVLFQVKAAPLLFSRTVT*VISAAL
Trigger: CAGTGCTGCCGATATAACTCAAGTAACTGTTCTTGA...GAAGAGCAATGGAGCCGCTTTTACTTGGAAGAGGACTAATCGTATATCTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGATGTTGACTTCTGGATaGAATCTTCGGCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWMLTSG*NLRPAC
Trigger: ACATGCTGGCCGAAGATTTCATCCAGAAGTCAACAT...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCTATAAAACAACCTTCTaGCCACCGCTTCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCYKTTF*PPLPCS
Trigger: ACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATA...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATATTAAATATTGGCTGTTaGCTTATCACGAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRILNIGC*LITSGQ
Trigger: TTGCCCACTCGTGATAAGTCAACAGCCAATATTTAA...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGAGAAATTGCTGGCTGTaGAGCGATAATTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMRNCWL*SDNFLC
Trigger: ACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCT...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAAGAAATTGCTGGCTGTaGAGCGATAATTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIRNCWL*SDNFLC
Trigger: ACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCT...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGCTGTTCCCAAGAAATTaGTGGCTGTGCAGCGATAAT +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWLFPRN*WLCSDN
Trigger: ATTATCGCTGCACAGCCAGCAATTTCTTGGGAACAG...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTGCCATTGCTTCCGGTaGTATACACAGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWCHCFR*YTQHSE
Trigger: CTCAGAGTGCTGTGTATAGCACCGGAAGCAATGGCA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAATTCCTATCTGGAGCTaGTGGTGGTGTTTCATGATG +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKIPIWS*WWCFMM
Trigger: CATCATGAAACACCACCAGCAGCTCCAGATAGGAAT...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCATTCCTATCTGGAGCTaGTGGTGGTGTTTCATGATG +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCIPIWS*WWCFMM
Trigger: CATCATGAAACACCACCAGCAGCTCCAGATAGGAAT...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTTCAGGTTTGAGAGGTaGCAGCTGGGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWFRFER*QLGFDG
Trigger: TCCATCAAAGCCCAGCTGGCACCTCTCAAACCTGAA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGACTTGACCGACATGTATaGATCATCCTCCATATTGTT +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRLDRHV*IILHIV
Trigger: AACAATATGGAGGATGATGCATACATGTCGGTCAAG...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTAAGAGTCCCAGTAGTTaGCAAATAGTATTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLKSPSS*QIVLRK
Trigger: TTTCCTCAATACTATTTGGCAACTACTGGGACTCTT...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAACGTGAAAATCGTGAGTaGCTGTTCCCAAGAAATTGC +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKRENRE*LFPRNC
Trigger: GCAATTTCTTGGGAACAGCCACTCACGATTTTCACG...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CTTCACATTCAATTTGAAAATACTCATCGAAGGGAAAGGCAACTTGGACTTTTGTGGATGATTGTCAACTaGGGAGCCATTGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHIQFENTHRRERQLGLLWMIVN*GAIDSP
Trigger: TGGAGAGTCAATGGCTCCCCAGTTGACAATCATCCA...CAAAAGTCCAAGTTGCCTTTCCCTTCGATGAGTATTTTCAAATTGAATGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATATTTGGTTTGTATCAATaGACGGACATCCACAACATC +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIFGLYQ*TDIHNI
Trigger: GATGTTGTGGATGTCCGTCCATTGATACAAACCAAA...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATTTGGTTTGTATCAATaGACGGACATCCACAACATC +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRFGLYQ*TDIHNI
Trigger: GATGTTGTGGATGTCCGTCCATTGATACAAACCAAA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCGTGAAGGTTTTCTGGTaGATCCGGAACATCAAGAAC +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCVKVFW*IRNIKN
Trigger: GTTCTTGATGTTCCGGATCCACCAGAAAACCTTCAC...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTCTTTCCTTGGACTCTaGTCAGTTCCTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWSFLGL*SVPPTF
Trigger: GAAGGTGGGAGGAACTGACCAGAGTCCAAGGAAAGA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTGTGGTTTTCTTTCCTTaGACTCTGGTCAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSCLNYILKNAIIIAPILVVFFP*TLVSSS
Trigger: GGAGGAACTGACCAGAGTCCAAGGAAAGAAAACCAC...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGAACCCTTATGTTTTGTaGATTCCTATCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRNPYVL*IPIWSC
Trigger: GCAGCTCCAGATAGGAATCCACAAAACATAAGGGTT...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TGCAGCGATAATTTCCTTTGTCCTGGTAGGAGACATTCTCTATCTTCAAAGTCTATCACCCGCAATGTGTaGTTTGTGACTGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CSDNFLCPGRRHSLSSKSITRNV*FVTVSS
Trigger: AGAAGAAACAGTCACAAACCACACATTGCGGGTGAT...AGACTTTGAAGATAGAGAATGTCTCCTACCAGGACAAAGGAAATTATCGCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp CTTCACATTCAATTTGAAAATACTCATCGAAGGGAAAGGCAACTTGGACTTTTGATAACGTCCACCCCATaGATCACTGGAGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: LHIQFENTHRRERQLGLLITSTP*ITGAVS
Trigger: TGATACAGCTCCAGTGATCCATGGGGTGGACGTTAT...CAAAAGTCCAAGTTGCCTTTCCCTTCGATGAGTATTTTCAAATTGAATGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGGAATGTTCACTTCTTTaGGATGTGTTCTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMECSLL*DVFFHP
Trigger: TGGATGGAAGAACACATCCCAAAGAAGTGAACATTC...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAGAATGTTCACTTCTTTaGGATGTGTTCTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRECSLL*DVFFHP
Trigger: TGGATGGAAGAACACATCCCAAAGAAGTGAACATTC...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAGTCCCCAAGATAAAGTaGCAGTGTCTTTATCAACTT +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIVPKIK*QCLYQL
Trigger: AAGTTGATAAAGACACTGCCACTTTATCTTGGGGAC...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCTGAATTTCTGGGTCTaGATGCAAATCTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMLNFWV*MQIFLF
Trigger: GAAAAGGAAGATTTGCATCCAGACCCAGAAATTCAG...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAAAATATGACCATCTCTaGGCAAATAGGAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIKYDHL*ANRSST
Trigger: TGTTGAGCTCCTATTTGCCCAGAGATGGTCATATTT...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAGAAATCGGAGGAGGATaGAGCTCGAGTTGCACTGAT +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLEIGGG*SSSCTD
Trigger: ATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTTC...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAATACCATTGCACGCCGTaGACTCTGTTACTCATTTTC +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKYHCTP*TLLLIF
Trigger: GAAAATGAGTAACAGAGTCCACGGCGTGCAATGGTA...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGACCAGGAAGAGAATTTaGATTTTCCCAACCCTTGGA +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRTRKRI*IFPTLG
Trigger: TCCAAGGGTTGGGAAAATCCAAATTCTCTTCCTGGT...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAGATCCTGAATGTTCCTaGATTGTTCGATGGAATTAT +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIDPECS*IVRWNY
Trigger: ATAATTCCATCGAACAATTCAGGAACATTCAGGATC...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGATTTTCTACCCAACATaGGTAAGACCCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWIFYPT*VRPSIF
Trigger: GAAGATGCTGGGTCTTACTCATGTTGGGTAGAAAAT...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGTCAAGAACAGTTACTTaGGTTATATCGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWSRTVT*VISAAL
Trigger: CAGTGCTGCCGATATAACTCAAGTAACTGTTCTTGA...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCCCAATAAACCAGCCTTaGGTGGAGATGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCPINQP*VEMSSY
Trigger: ATATGATGACATCTCCACTCAAGGCTGGTTTATTGG...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGTTAATAATAGTAGTGTaGGAAGAGCAATCGCACACA +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMLIIVV*EEQSHT
Trigger: TGTGTGCGATTGCTCTTCTCACACTACTATTATTAA...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGGTAGGCACCAATAAATaGTCCATCTTCACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWVGTNK*SIFTEE
Trigger: CTCTTCAGTGAAGATGGATCATTTATTGGTGCCTAC...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTACTATTCCTTTTGTGCTaGAGAGTCCCAGTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLLFLLC*RVPVVA
Trigger: GGCAACTACTGGGACTCTTCAGCACAAAAGGAATAG...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAAAAAAGGTAATCACGTaGACCTGTTCTACATACCTT +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIKKVIT*TCSTYL
Trigger: AAGGTATGTAGAACAGGTTCACGTGATTACCTTTTT...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGACAGGATTATGGTTTaGAGTTTACAGCACCTGCGC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWDRIMV*SLQHLR
Trigger: GCGCAGGTGCTGTAAACTGCAAACCATAATCCTGTC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR GCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGTTGCTTGATGGAATTTaGCTTGGAACCAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMLLDGI*LGTNFC
Trigger: ACAGAAATTGGTTCCAAGGCAAATTCCATCAAGCAA...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGTGTAATTCAAGCATATaGAATTTGGGGATACGAGGA +
Preference number: 4 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMCNSSI*NLGIRG
Trigger: TCCTCGTATCCCCAAATTGCATATGCTTGAATTACA...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGATTCCTATCTGGAGCTaGTGGTGGTGTTTCATGATG +
Preference number: 4 (lower is better)
Translates to: FSPSLVCINGRTSTTSILIPIWS*WWCFMM
Trigger: CATCATGAAACACCACCAGCAGCTCCAGATAGGAAT...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTAACATAGGCCTGAAGTaGTTGGCATTTTATATTTTG +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLNIGLK*LAFYIL
Trigger: CAAAATATAAAATGCCAAGCACTTCAGGCCTATGTT...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAAAGAGTCCCAGTAGTTaGCAAATAGTATTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIKSPSS*QIVLRK
Trigger: TTTCCTCAATACTATTTGGCAACTACTGGGACTCTT...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAATTTATAATTACCATTaGACGCCGTGGACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRIYNYH*TPWTLL
Trigger: TAACAGAGTCCACGGCGTGCAATGGTAATTATAAAT...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAGTCTCCTCTCACTTTTaGTTTACAGCTGAGACCTTA +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKVSSHF*FTAETL
Trigger: TAAGGTCTCAGCTGTAAACCAAAAGTGAGAGGAGAC...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTGGATGATTGTCAACTaGGGAGCCATTGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWWMIVN*GAIDSP
Trigger: TGGAGAGTCAATGGCTCCCCAGTTGACAATCATCCA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAAACATCACCAGCAAATaGATGATTGTCAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKNITSK*MIVNWG
Trigger: TCCCCAGTTGACAATCATCCATTTGCTGGTGATGTT...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCAACATCACCAGCAAATaGATGATTGTCAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: GNHVNLFYIPFISFDDVINITSK*MIVNWG
Trigger: TCCCCAGTTGACAATCATCCATTTGCTGGTGATGTT...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GTTTTCTGGTGGATCCGGAACATCAAGAACAGTTACTTGAGTTATATCGGCAGCAATTTTCTCCATCTTTaGTTTGTATCAATGGACGGA +
Preference number: 4 (lower is better)
Translates to: VFWWIRNIKNSYLSYIGSNFLHL*FVSMDG
Trigger: TCCGTCCATTGATACAAACCAAAGATGGAGAAAATT...GCTGCCGATATAACTCAAGTAACTGTTCTTGATGTTCCGGATCCACCAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp CTTCACATTCAATTTGAAAATACTCATCGAAGGGAAAGGCAACTTGGACTTTTGGTGAAGGTTTTCTGGTaGATCCGGAACATCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LHIQFENTHRRERQLGLLVKVFW*IRNIKN
Trigger: GTTCTTGATGTTCCGGATCCACCAGAAAACCTTCAC...CAAAAGTCCAAGTTGCCTTTCCCTTCGATGAGTATTTTCAAATTGAATGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGTGGTTTTCTTTCCTTaGACTCTGGTCAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWVVFFP*TLVSSS
Trigger: GGAGGAACTGACCAGAGTCCAAGGAAAGAAAACCAC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGTCCATTCTGCTCCATaGATTTCAAAGGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWVHSAP*ISKAPT
Trigger: AGTGGGAGCCTTTGAAATCCATGGAGCAGAATGGAC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACGTCCATTCTGCTCCATaGATTTCAAAGGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYVHSAP*ISKAPT
Trigger: AGTGGGAGCCTTTGAAATCCATGGAGCAGAATGGAC...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAATCACCCGCAATGTGTaGTTTGTGACTGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKITRNV*FVTVSS
Trigger: AGAAGAAACAGTCACAAACCACACATTGCGGGTGAT...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GTTTTCTGGTGGATCCGGAACATCAAGAACAGTTACTTGAGTTATATCGGCAGCTTCAGGTACTCCTTCTaGTGTTTGAAATATATAAGG +
Preference number: 4 (lower is better)
Translates to: VFWWIRNIKNSYLSYIGSFRYSF*CLKYIR
Trigger: CCTTATATATTTCAAACACCAGAAGGAGTACCTGAA...GCTGCCGATATAACTCAAGTAACTGTTCTTGATGTTCCGGATCCACCAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACCAGGATGTTGACTTCTaGATGAAATCTTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYQDVDF*MKSSAS
Trigger: GCTGGCCGAAGATTTCATCCAGAAGTCAACATCCTG...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCCCTGTCTATACATTCTaGATGACTCGTGAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCPVYTF*MTREVQ
Trigger: TTGAACCTCACGAGTCATCCAGAATGTATAGACAGG...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGTCCCTCCAGAAAACTaGAACCTTAGAAATCGGAGG +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWVPPEN*NLRNRR
Trigger: CCTCCGATTTCTAAGGTTCCAGTTTTCTGGAGGGAC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACGTCCCTCCAGAAAACTaGAACCTTAGAAATCGGAGG +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYVPPEN*NLRNRR
Trigger: CCTCCGATTTCTAAGGTTCCAGTTTTCTGGAGGGAC...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTAAACAAAGAAAGCTTTaGCTGAACCCTACTTATTTC +
Preference number: 4 (lower is better)
Translates to: CSFEQINMEGWGEPVALLKQRKL*LNPTYF
Trigger: GAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTT...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CAA 72 bp CCCAACCACTGTAGCGTAATTTTCTCCATCTTTGGTTaGTATCAATGGACGGACATCCACAACATCAATATT +
Preference number: 4 (lower is better)
Translates to: PNHCSVIFSIFG*YQWTDIHNINI
Trigger: AATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAATTACGCTACAGTGGTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
3UTR CAA 72 bp TTTCAAAGGCTCCCACTTTATAATCATTTCCTTGGGTaGAGAGGCTTGAACCCTTATGTTTTGTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: FQRLPLYNHFLG*RGLNPYVLWIP
Trigger: AGGAATCCACAAAACATAAGGGTTCAAGCCTCTCAACCCAAGGAAATGATTATAAAGTGGGAGCCTTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGTGGAACCTGTTGAACTaGAGATGGTATTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWWNLLN*RWYFNC
Trigger: GCAATTGAAATACCATCTTCAGTTCAACAGGTTCCA...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCGGCAACTTGGACTTTTaGCTGTTTTATGATTGTTGG +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCGNLDF*LFYDCW
Trigger: CCAACAATCATAAAACAGTCAAAAGTCCAAGTTGCC...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAGATTCCCAGTTTATTTaGAGCAAAGCAGCGGTATTT +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKDSQFI*SKAAVF
Trigger: AAATACCGCTGCTTTGCTTCAAATAAACTGGGAATC...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGACTGTGTTTCAAATGTaGGTCACATTTGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRTVFQM*VTFAFT
Trigger: TGTGAAAGCAAATGTGACTCACATTTGAAACACAGT...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTGTCTTTCAGACAAGTaGAGGTTTTCTGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWCLSDK*RFSGGS
Trigger: GGATCCACCAGAAAACCTTCACTTGTCTGAAAGACA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGCCAATAAACCAGCCTTaGGTGGAGATGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: FSPSLVCINGRTSTTSILPINQP*VEMSSY
Trigger: ATATGATGACATCTCCACTCAAGGCTGGTTTATTGG...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGATGTTGACTTCTGGATaGAATCTTCGGCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWMLTSG*NLRPAC
Trigger: ACATGCTGGCCGAAGATTTCATCCAGAAGTCAACAT...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAATGTTGACTTCTGGATaGAATCTTCGGCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLMLTSG*NLRPAC
Trigger: ACATGCTGGCCGAAGATTTCATCCAGAAGTCAACAT...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACTATAAAACAACCTTCTaGCCACCGCTTCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYYKTTF*PPLPCS
Trigger: ACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATA...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGAAATTTTGGTCTCCATaGACTATAAGGGGTTACCAT +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRKFWSP*TIRGYH
Trigger: ATGGTAACCCCTTATAGTTCATGGAGACCAAAATTT...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAACTGCGGTCAGATCCTaGGCCCATAAATTACAGTTT +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLTAVRS*AHKLQF
Trigger: AAACTGTAATTTATGGGCTCAGGATCTGACCGCAGT...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGCCTCACATAACAAGATaGCATTGCTTCCGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWPHITR*HCFRCY
Trigger: ATAGCACCGGAAGCAATGGCATCTTGTTATGTGAGG...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAACATAGGCCTGAAGTaGTTGGCATTTTATATTTTG +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRNIGLK*LAFYIL
Trigger: CAAAATATAAAATGCCAAGCACTTCAGGCCTATGTT...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACGGACTGGAGCACAACTaGCAGAAAATAAATTCCCTG +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYGLEHN*QKINSL
Trigger: CAGGGAATTTATTTTCTGGCAGTTGTGCTCCAGTCC...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGGTCTCCTCTCACTTTTaGTTTACAGCTGAGACCTTA +
Preference number: 4 (lower is better)
Translates to: FSPSLVCINGRTSTTSILVSSHF*FTAETL
Trigger: TAAGGTCTCAGCTGTAAACCAAAAGTGAGAGGAGAC...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGCACAGCAGTATGATTTaGTTGAAGGTTGGTAAAACT +
Preference number: 4 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRHSSMI*LKVGKT
Trigger: AGTTTTACCAACCTTCAACCAAATCATACTGCTGTG...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGTTTGGTTTGTATCAATaGACGGACATCCACAACATC +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWFGLYQ*TDIHNI
Trigger: GATGTTGTGGATGTCCGTCCATTGATACAAACCAAA...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAATTTTCTCCATCTTTaGTTTGTATCAATGGACGGA +
Preference number: 4 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRNFLHL*FVSMDG
Trigger: TCCGTCCATTGATACAAACCAAAGATGGAGAAAATT...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACGTGAAGGTTTTCTGGTaGATCCGGAACATCAAGAAC +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYVKVFW*IRNIKN
Trigger: GTTCTTGATGTTCCGGATCCACCAGAAAACCTTCAC...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAAATATGACCATCTCTaGGCAAATAGGAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWKYDHL*ANRSST
Trigger: TGTTGAGCTCCTATTTGCCCAGAGATGGTCATATTT...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGTTATCCGATGGTCAGTaGAATAAAAAGGGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: FSPSLVCINGRTSTTSILLSDGQ*NKKGCH
Trigger: ATGGCAACCCTTTTTATTTCACTGACCATCGGATAA...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTGGGTTTTCTTTGCTTaGTGGAATTTGCCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWWVFFA*WNLPWN
Trigger: GTTCCAAGGCAAATTCCATCAAGCAAAGAAAACCCA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACATTTTCTACCCAACATaGGTAAGACCCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYIFYPT*VRPSIF
Trigger: GAAGATGCTGGGTCTTACTCATGTTGGGTAGAAAAT...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CATATAAACCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTGAAAAATGCATTTTCTACCCAACATaGGTAAGACCCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: HINQHILSLLSQLHLEKCIFYPT*VRPSIF
Trigger: GAAGATGCTGGGTCTTACTCATGTTGGGTAGAAAAT...GCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGGTTTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR TCA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGACTGTGTTTCAAATGTaGGTCACATTTGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWTVFQM*VTFAFT
Trigger: TGTGAAAGCAAATGTGACTCACATTTGAAACACAGT...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTATCAAGAACAGTTACTTaGGTTATATCGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLSRTVT*VISAAL
Trigger: CAGTGCTGCCGATATAACTCAAGTAACTGTTCTTGA...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACCCAATAAACCAGCCTTaGGTGGAGATGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYPINQP*VEMSSY
Trigger: ATATGATGACATCTCCACTCAAGGCTGGTTTATTGG...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCTTAATAATAGTAGTGTaGGAAGAGCAATCGCACACA +
Preference number: 4 (lower is better)
Translates to: GNHVNLFYIPFISFDDVILIIVV*EEQSHT
Trigger: TGTGTGCGATTGCTCTTCTCACACTACTATTATTAA...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACGTAGGCACCAATAAATaGTCCATCTTCACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYVGTNK*SIFTEE
Trigger: CTCTTCAGTGAAGATGGATCATTTATTGGTGCCTAC...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAAAGTTCTTGCTCCTTTaGACAGATAAATATGGAAGG +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKKFLLL*TDKYGR
Trigger: CCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTT...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCAGTTTGGGTTTTCTTTaGTTGATGGAATTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCSLGFL*LMEFAL
Trigger: CAAGGCAAATTCCATCAAGCAAAGAAAACCCAAACT...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCATTAAGACAGGATTATaGTTTGCAGTTTACAGCACC +
Preference number: 4 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIIKTGL*FAVYST
Trigger: GGTGCTGTAAACTGCAAACCATAATCCTGTCTTAAT...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256509.7
CDS-3UTR CCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAGTCTCCTCTCACTTTTaGTTTACAGCTGAGACCTTA +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLVSSHF*FTAETL
Trigger: TAAGGTCTCAGCTGTAAACCAAAAGTGAGAGGAGAC...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCAAGGGAAAGGCAACTTaGACTTTTGACTGTTTTATG +
Preference number: 4 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIKGKAT*TFDCFM
Trigger: CATAAAACAGTCAAAAGTCCAAGTTGCCTTTCCCTT...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACTTCCCAAGAAATTGCTaGCTGTGCAGCGATAATTTC +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYFPRNC*LCSDNF
Trigger: GAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAA...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTTCCCAAGAAATTGCTaGCTGTGCAGCGATAATTTC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWFPRNC*LCSDNF
Trigger: GAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAACACAGCAGTATGATTTaGTTGAAGGTTGGTAAAACT +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKHSSMI*LKVGKT
Trigger: AGTTTTACCAACCTTCAACCAAATCATACTGCTGTG...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCCACAGCAGTATGATTTaGTTGAAGGTTGGTAAAACT +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCHSSMI*LKVGKT
Trigger: AGTTTTACCAACCTTCAACCAAATCATACTGCTGTG...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGATCACCCGCAATGTGTaGTTTGTGACTGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWITRNV*FVTVSS
Trigger: AGAAGAAACAGTCACAAACCACACATTGCGGGTGAT...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAACTCAAATACCTCTATTaGGTGAGTCTTTTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKLKYLY*VSLLSK
Trigger: CTTACTCAAAAGACTCACCCAATAGAGGTATTTGAG...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp CCAACAGACTTTTTGTTTTCCACCAATTTATCTGATAGCCTTTCAGACGTCCATCTCAAATACCTCTATTaGGTGAGTCTTTTGAGTAAG +
Preference number: 4 (lower is better)
Translates to: PTDFLFSTNLSDSLSDVHLKYLY*VSLLSK
Trigger: CTTACTCAAAAGACTCACCCAATAGAGGTATTTGAG...ATGGACGTCTGAAAGGCTATCAGATAAATTGGTGGAAAACAAAAAGTCTGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAATAAATATGGAAGGTTaGGGTGAACCAGTAGCGTTG +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLINMEG*GEPVAL
Trigger: CAACGCTACTGGTTCACCCCAACCTTCCATATTTAT...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CAA 72 bp AAAGCCAGTAACGAACAAAGTTTTAAATATTGGCTGTaGACTTATCACGAGTGGGCAATTTGCAAACAAGCA +
Preference number: 4 (lower is better)
Translates to: KASNEQSFKYWL*TYHEWAICKQA
Trigger: TGCTTGTTTGCAAATTGCCCACTCGTGATAAGTCAACAGCCAATATTTAAAACTTTGTTCGTTACTGGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTGGAACCTGTTGAACTaGAGATGGTATTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWWNLLN*RWYFNC
Trigger: GCAATTGAAATACCATCTTCAGTTCAACAGGTTCCA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTATTATCCGATGGTCAGTaGAATAAAAAGGGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLLSDGQ*NKKGCH
Trigger: ATGGCAACCCTTTTTATTTCACTGACCATCGGATAA...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGAGTAAGATTTACTCCTaGTATCTTCCCGATACCTTT +
Preference number: 4 (lower is better)
Translates to: FSPSLVCINGRTSTTSILSKIYS*YLPDTF
Trigger: AAAGGTATCGGGAAGATATCAGGAGTAAATCTTACT...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGCAAATTGGCTGTGACTaGAGTTTTTCCTATAGCATT +
Preference number: 4 (lower is better)
Translates to: FSPSLVCINGRTSTTSILQIGCD*SFSYSI
Trigger: AATGCTATAGGAAAAACTGCAGTCACAGCCAATTTG...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTTGTAATTCAAGCATATaGAATTTGGGGATACGAGGA +
Preference number: 4 (lower is better)
Translates to: PSCLNYILKNAIIIAPILCNSSI*NLGIRG
Trigger: TCCTCGTATCCCCAAATTGCATATGCTTGAATTACA...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACACAATGGGCACTTTCTaGCTGTTCTCGTATAAAACA +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYTMGTF*LFSYKT
Trigger: TGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGT...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACCTTGACCGACATGTATaGATCATCCTCCATATTGTT +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYLDRHV*IILHIV
Trigger: AACAATATGGAGGATGATGCATACATGTCGGTCAAG...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTATTAAGACAGGATTATaGTTTGCAGTTTACAGCACC +
Preference number: 4 (lower is better)
Translates to: PSCLNYILKNAIIIAPILIKTGL*FAVYST
Trigger: GGTGCTGTAAACTGCAAACCATAATCCTGTCTTAAT...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGAGTCCACGAAAATGTTaGTTCTGGATTTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWSPRKC*FWISFS
Trigger: GCTAAAGGAAATCCAGAACCAACATTTTCGTGGACT...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GGTAATCACGTGAACCTGTTCTACATACCTTTCATCTCTTTTGATGACGTAATCTTCAGGTACTCCTTCTaGTGTTTGAAATATATAAGG +
Preference number: 4 (lower is better)
Translates to: GNHVNLFYIPFISFDDVIFRYSF*CLKYIR
Trigger: CCTTATATATTTCAAACACCAGAAGGAGTACCTGAA...GATTACGTCATCAAAAGAGATGAAAGGTATGTAGAACAGGTTCACGTGATTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CCA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAATTCAGGTACTCCTTCTaGTGTTTGAAATATATAAGG +
Preference number: 4 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKFRYSF*CLKYIR
Trigger: CCTTATATATTTCAAACACCAGAAGGAGTACCTGAA...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCTTCAGGTACTCCTTCTaGTGTTTGAAATATATAAGG +
Preference number: 4 (lower is better)
Translates to: FWMKSSASMFLFLYESSCFRYSF*CLKYIR
Trigger: CCTTATATATTTCAAACACCAGAAGGAGTACCTGAA...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACCTGAATTTCTGGGTCTaGATGCAAATCTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYLNFWV*MQIFLF
Trigger: GAAAAGGAAGATTTGCATCCAGACCCAGAAATTCAG...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACTTGACTTATCACGAGTaGGCAATTTGCAAACAAGCA +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYLTYHE*AICKQA
Trigger: TGCTTGTTTGCAAATTGCCCACTCGTGATAAGTCAA...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR TCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGATCCTGAATGTTCCTaGATTGTTCGATGGAATTAT +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWDPECS*IVRWNY
Trigger: ATAATTCCATCGAACAATTCAGGAACATTCAGGATC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACGATCCTGAATGTTCCTaGATTGTTCGATGGAATTAT +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYDPECS*IVRWNY
Trigger: ATAATTCCATCGAACAATTCAGGAACATTCAGGATC...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAAGTAAGATTTACTCCTaGTATCTTCCCGATACCTTT +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLSKIYS*YLPDTF
Trigger: AAAGGTATCGGGAAGATATCAGGAGTAAATCTTACT...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256509.7
CDS-3UTR TCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACAGTAAGATTTACTCCTaGTATCTTCCCGATACCTTT +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYSKIYS*YLPDTF
Trigger: AAAGGTATCGGGAAGATATCAGGAGTAAATCTTACT...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR TCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACAAGTTCTTGCTCCTTTaGACAGATAAATATGGAAGG +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYKFLLL*TDKYGR
Trigger: CCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTT...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR TCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGAAATTTTGGTCTCCATaGACTATAAGGGGTTACCAT +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWKFWSP*TIRGYH
Trigger: ATGGTAACCCCTTATAGTTCATGGAGACCAAAATTT...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAAGTTTGGGTTTTCTTTaGTTGATGGAATTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLSLGFL*LMEFAL
Trigger: CAAGGCAAATTCCATCAAGCAAAGAAAACCCAAACT...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGCAAATTGGCTGTGACTaGAGTTTTTCCTATAGCATT +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWQIGCD*SFSYSI
Trigger: AATGCTATAGGAAAAACTGCAGTCACAGCCAATTTG...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACTGTAATTCAAGCATATaGAATTTGGGGATACGAGGA +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYCNSSI*NLGIRG
Trigger: TCCTCGTATCCCCAAATTGCATATGCTTGAATTACA...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACATTTATAATTACCATTaGACGCCGTGGACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYIYNYH*TPWTLL
Trigger: TAACAGAGTCCACGGCGTGCAATGGTAATTATAAAT...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR GCA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGAGTTTGGGTTTTCTTTaGTTGATGGAATTTGAACTG +
Preference number: 4 (lower is better)
Translates to: FSPSLVCINGRTSTTSILSLGFL*LMEFEL
Trigger: CAGTTCAAATTCCATCAAGCAAAGAAAACCCAAACT...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGATTAAGACAGGATTATaGTTTGCAGTTTACAGCACC +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWIKTGL*FAVYST
Trigger: GGTGCTGTAAACTGCAAACCATAATCCTGTCTTAAT...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGAAGGGAAAGGCAACTTaGACTTTTGACTGTTTTATG +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWKGKAT*TFDCFM
Trigger: CATAAAACAGTCAAAAGTCCAAGTTGCCTTTCCCTT...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACAAGGGAAAGGCAACTTaGACTTTTGACTGTTTTATG +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYKGKAT*TFDCFM
Trigger: CATAAAACAGTCAAAAGTCCAAGTTGCCTTTCCCTT...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTTAAAAACCACGTTTTaGCTGATGACAAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWLKTTF*LMTKKR
Trigger: CCTCTTCTTTGTCATCAGCCAAAACGTGGTTTTTAA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
3UTR CAA 72 bp TTTCTTTGTCCTGAAAATCTTAGAATGTTCACTTCTTaGGGATGTGTTCTTCCATCCAACAGACTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: FLCPENLRMFTS*GCVLPSNRLFV
Trigger: AACAAAAAGTCTGTTGGATGGAAGAACACATCCCAAAGAAGTGAACATTCTAAGATTTTCAGGACAAAGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR GCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACAACATAGGCCTGAAGTaGTTGGCATTTTATATTTTG +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYNIGLK*LAFYIL
Trigger: CAAAATATAAAATGCCAAGCACTTCAGGCCTATGTT...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR GCA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGAGTTTGGGTTTTCTTTaGTTGATGGAATTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LFLYESSCSFEQINMEGWSLGFL*LMEFEL
Trigger: CAGTTCAAATTCCATCAAGCAAAGAAAACCCAAACT...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397491.6
CDS-3UTR CCA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACAATTTTCTCCATCTTTaGTTTGTATCAATGGACGGA +
Preference number: 4 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYNFLHL*FVSMDG
Trigger: TCCGTCCATTGATACAAACCAAAGATGGAGAAAATT...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS CCA 90 bp GCCGGCCGGGAGCCGGGACGGGGGCGCGCAGGGTCCGGTAAGCTCTaGGCGGATCCAGGGAGGGTCTCGCCGGCCGCTGCCCGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: AGREPGRGRAGSGKL*ADPGRVSPAAARWS
Trigger: GGACCAGCGGGCAGCGGCCGGCGAGACCCTCCCTGGATCCGCCCAGAGCTTACCGGACCCTGCGCGCCCCCGTCCCGGCTCCCGGCCGGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000427688.5
ENST00000481167.5
CDS CCA 90 bp CCCGCCCGTCCCCTCCCGCCGCTGGCTCTCTGGCCGCGGGAAGGCTaGAGCCGTTCTGGCTGGCACCGGGGTCTACGCCCTCCTGCCGGA +
Preference number: 5 (lower is better)
Translates to: PARPLPPLALWPREG*SRSGWHRGLRPPAG
Trigger: TCCGGCAGGAGGGCGTAGACCCCGGTGCCAGCCAGAACGGCTCCAGCCTTCCCGCGGCCAGAGAGCCAGCGGCGGGAGGGGACGGGCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000427688.5
ENST00000481167.5
CDS CCA 90 bp CCGCCGCTGGCTCTCTGGCCGCGGGAAGGCTGGAGCCGTTCTGGCTaGCACCGGGGTCTACGCCCTCCTGCCGGAGGCTGGCTCTCGCCT +
Preference number: 5 (lower is better)
Translates to: PPLALWPREGWSRSG*HRGLRPPAGGWLSP
Trigger: AGGCGAGAGCCAGCCTCCGGCAGGAGGGCGTAGACCCCGGTGCCAGCCAGAACGGCTCCAGCCTTCCCGCGGCCAGAGAGCCAGCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000427688.5
ENST00000481167.5
CDS CCA 90 bp CCTCCCGCCGCTGGCTCTCTGGCCGCGGGAAGGCTGGAGCCGTTCTaGCTGGCACCGGGGTCTACGCCCTCCTGCCGGAGGCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: PPAAGSLAAGRLEPF*LAPGSTPSCRRLAL
Trigger: GAGAGCCAGCCTCCGGCAGGAGGGCGTAGACCCCGGTGCCAGCCAGAACGGCTCCAGCCTTCCCGCGGCCAGAGAGCCAGCGGCGGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000427688.5
ENST00000481167.5
CDS-3UTR CAA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCAAAGGTGGGAGGCCTTaGGGAGGATTGCATGGGAGG +
Preference number: 5 (lower is better)
Translates to: EQWALSACSRIKQPSDHRKGGRP*GGLHGR
Trigger: CCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACATGCATGGGAGGACAATaGGATCTCCCTCCTCCACTT +
Preference number: 5 (lower is better)
Translates to: KSEEDGARVALMDVYILTCMGGQ*DLPPPL
Trigger: AAGTGGAGGAGGGAGATCCAATTGTCCTCCCATGCA...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGACACTCTGAGGCTTCTTaGTCCAGCGAGGAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRHSEAS*SSEEAL
Trigger: AAGAGCCTCCTCGCTGGACAAAGAAGCCTCAGAGTG...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCACACTCTGAGGCTTCTTaGTCCAGCGAGGAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSHSEAS*SSEEAL
Trigger: AAGAGCCTCCTCGCTGGACAAAGAAGCCTCAGAGTG...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCTCGAACGTCACAACCTaGCCCTCCTCACAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: EQWALSACSRIKQPSDHRSNVTT*PSSQAV
Trigger: CACAGCTTGTGAGGAGGGCAAGGTTGTGACGTTCGA...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTTCGAACGTCACAACCTaGCCCTCCTCACAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTISNVTT*PSSQAV
Trigger: CACAGCTTGTGAGGAGGGCAAGGTTGTGACGTTCGA...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTTGCATGGGAGGACAATaGGATCTCCCTCCTCCACTT +
Preference number: 5 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTICMGGQ*DLPPPL
Trigger: AAGTGGAGGAGGGAGATCCAATTGTCCTCCCATGCA...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCGGAGGCAACAGCAGTTaGGGTTTTCTTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLGGNSS*GFLCLM
Trigger: CATCAAGCAAAGAAAACCCAAACTGCTGTTGCCTCC...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTCACTCTGAGGCTTCTTaGTCCAGCGAGGAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSHSEAS*SSEEAL
Trigger: AAGAGCCTCCTCGCTGGACAAAGAAGCCTCAGAGTG...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTCCACTTGATTGTGGGTaGAGGTTCTCCTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIPLDCG*RFSFSL
Trigger: GAGGCTGAAGGAGAACCTCAACCCACAATCAAGTGG...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp AAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCCCTCCTTGAACCCTTATGTTTaGTGGATTCCTATCTGGAGC +
Preference number: 5 (lower is better)
Translates to: KGGRPLGGLHGRTIGSPSLNPYV*WIPIWS
Trigger: GCTCCAGATAGGAATCCACAAAACATAAGGGTTCAA...GGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp AAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCCCTCCTCCAATAAACCAGCCTaGAGTGGAGATGTCATCATA +
Preference number: 5 (lower is better)
Translates to: KGGRPLGGLHGRTIGSPSSNKPA*SGDVII
Trigger: TATGATGACATCTCCACTCAAGGCTGGTTTATTGGA...GGAGGGAGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACAGACCGAAGGCTTCCTTaGAGAGGCTTTTCATCACTG +
Preference number: 5 (lower is better)
Translates to: KSEEDGARVALMDVYILTDRRLP*RGFSSL
Trigger: CAGTGATGAAAAGCCTCTCAAAGGAAGCCTTCGGTC...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS TCA 90 bp ATAAACCAGCATATTTCCCTTCTCCTAAGGTGGAGCTTTCCTCCGTaGTCGGTTTTCCACAGCCCTGTGAAGTGCAAGCCCTCAAGTAGA +
Preference number: 5 (lower is better)
Translates to: INQHISLLLRWSFPP*SVFHSPVKCKPSSR
Trigger: TCTACTTGAGGGCTTGCACTTCACAGGGCTGTGGAAAACCGATCACGGAGGAAAGCTCCACCTTAGGAGAAGGGAAATATGCTGGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445697.1
ENST00000620033.4
CDS GCA 90 bp TCTCCCTCTCCGTATTCGACTAAGCTGTCAGCACTTTCAGTAGGCTaGATATCCCTATTAAGGGACCGAAGGCTTCCTTTGAGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: SPSPYSTKLSALSVG*ISLLRDRRLPLRGF
Trigger: AAAGCCTCTCAAAGGAAGCCTTCGGTCCCTTAATAGGGATATGCAGCCTACTGAAAGTGCTGACAGCTTAGTCGAATACGGAGAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000445697.1
ENST00000620033.4
CDS-3UTR CAA 90 bp TTGGCATTGGCAAGGATAGTTCCATGGACATTTGAGGCTTCACACTGGTACACATGCATGGGAGGACAATaGGATCTCCCTCCTCCACTT +
Preference number: 5 (lower is better)
Translates to: LALARIVPWTFEASHWYTCMGGQ*DLPPPL
Trigger: AAGTGGAGGAGGGAGATCCAATTGTCCTCCCATGCA...TGTGTACCAGTGTGAAGCCTCAAATGTCCATGGAACTATCCTTGCCAATGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCATCAACTGGGGAGCCATaGACTCTCCACTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSSTGEP*TLHLIV
Trigger: CACAATCAAGTGGAGAGTCAATGGCTCCCCAGTTGA...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACACGTTGCTTACATATGTaGTGTTTATGCCCGAAGGGG +
Preference number: 5 (lower is better)
Translates to: KSEEDGARVALMDVYILTRCLHM*CLCPKG
Trigger: CCCCTTCGGGCATAAACACAACATATGTAAGCAACG...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS TCA 90 bp TCTGAGCAGGACATAGGTGAACGCATCATGGGAATCAATTCTCTGTaGATTATTTTTCAATTCTTCTTACTGGGCCCGCGCGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SEQDIGERIMGINSL*IIFQFFLLGPRGCC
Trigger: GCAGCAGCCGCGCGGGCCCAGTAAGAAGAATTGAAAAATAATTCACAGAGAATTGATTCCCATGATGCGTTCACCTATGTCCTGCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486881.1
CDS-3UTR CAA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGAAAGGTGGGAGGCCTTaGGGAGGATTGCATGGGAGG +
Preference number: 5 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRKGGRP*GGLHGR
Trigger: CCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCACTCTGAGGCTTCTTaGTCCAGCGAGGAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMHSEAS*SSEEAL
Trigger: AAGAGCCTCCTCGCTGGACAAAGAAGCCTCAGAGTG...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp AGCAGGCGTCATCACCCGCAATGTGTGGTTTGTGACTGTTTCTTCTTCCCACTCATATACTCGCTAATATaGCTGTTGTGGTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SRRHHPQCVVCDCFFFPLIYSLI*LLWSAP
Trigger: TGGAGCTGACCACAACAGCAATATTAGCGAGTATAT...GAGTGGGAAGAAGAAACAGTCACAAACCACACATTGCGGGTGATGACGCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCACGTTGCTTACATATGTaGTGTTTATGCCCGAAGGGG +
Preference number: 5 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSRCLHM*CLCPKG
Trigger: CCCCTTCGGGCATAAACACAACATATGTAAGCAACG...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS TCA 90 bp TTCAACAGATCCCTTCTCCTTAGATCCAGCGTAGGCACCAATAAATaGTCCATCTTCACTGAAGAGACCATGGTCTCCCTCTCCGTATTC +
Preference number: 5 (lower is better)
Translates to: FNRSLLLRSSVGTNK*SIFTEETMVSLSVF
Trigger: GAATACGGAGAGGGAGACCATGGTCTCTTCAGTGAAGATGGATCATTTATTGGTGCCTACGCTGGATCTAAGGAGAAGGGATCTGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000445697.1
ENST00000620033.4
CDS-3UTR CAA 90 bp GGTAAGTCACCACCAATTTTGTTCCAATCAACCTGTGGAGTTGGCAAGCCTTCAGTAAAAGCGGCTCCATaGCTCTTCAGGAAGAAGACA +
Preference number: 5 (lower is better)
Translates to: GKSPPILFQSTCGVGKPSVKAAP*LFRKKT
Trigger: TGTCTTCTTCCTGAAGAGCAATGGAGCCGCTTTTAC...TGAAGGCTTGCCAACTCCACAGGTTGATTGGAACAAAATTGGTGGTGACTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACGCAGCGGTATTTCCCTaGAAAGTGAGATATGTGCCC +
Preference number: 5 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNAAVFP*KVRYVP
Trigger: GGGCACATATCTCACTTTCAAGGGAAATACCGCTGC...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ATGTGTAAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCGATTCCCAGTTTATTaGAAGCAAAGCAGCGGTATT +
Preference number: 5 (lower is better)
Translates to: MCKGGRPLGGLHGRTIGSRFPVY*KQSSGI
Trigger: AATACCGCTGCTTTGCTTCAAATAAACTGGGAATCG...AGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTTACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCCCTTTTCTTCCACGTTaGCGAAGTATAGATCTCCCT +
Preference number: 5 (lower is better)
Translates to: EQWALSACSRIKQPSDHRPFLPR*RSIDLP
Trigger: AGGGAGATCTATACTTCGCAAACGTGGAAGAAAAGG...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TTTGTGGATTCCTATCTGGAGCTGCTGGTGGTGTTTCATGATGGTCTGACGGCTAGCAAGATTTCCCCTTaGAGGATGGTAATTGAAGAC +
Preference number: 5 (lower is better)
Translates to: FVDSYLELLVVFHDGLTASKISP*RMVIED
Trigger: GTCTTCAATTACCATCCTCAAAGGGGAAATCTTGCT...AGCCGTCAGACCATCATGAAACACCACCAGCAGCTCCAGATAGGAATCCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATACCACTTGATTGTGGGTaGAGGTTCTCCTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIPLDCG*RFSFSL
Trigger: GAGGCTGAAGGAGAACCTCAACCCACAATCAAGTGG...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TTTGTGGATTCCTATCTGGAGCTGCTGGTGGTGTTTCATGATGGTCTGACGGCTACATCAATATTGGCATaGGCAAGGATAGTTCCATGG +
Preference number: 5 (lower is better)
Translates to: FVDSYLELLVVFHDGLTATSILA*ARIVPW
Trigger: CCATGGAACTATCCTTGCCAATGCCAATATTGATGT...AGCCGTCAGACCATCATGAAACACCACCAGCAGCTCCAGATAGGAATCCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp AAATCGGAGGAGGATGGAGCTCGAGTTGCACTGATGGATGTCTACATCCTCACATTGAACCCTTATGTTTaGTGGATTCCTATCTGGAGC +
Preference number: 5 (lower is better)
Translates to: KSEEDGARVALMDVYILTLNPYV*WIPIWS
Trigger: GCTCCAGATAGGAATCCACAAAACATAAGGGTTCAA...TGTGAGGATGTAGACATCCATCAGTGCAACTCGAGCTCCATCCTCCTCCGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp CCCTACTTCGTTCACGGCTATGACCCTGAACTGGTATCTCACAAATGGAGCCAAAGAATGTTCACTTCTTaGGGATGTGTTCTTCCATCC +
Preference number: 5 (lower is better)
Translates to: PYFVHGYDPELVSHKWSQRMFTS*GCVLPS
Trigger: GGATGGAAGAACACATCCCAAAGAAGTGAACATTCT...TTGGCTCCATTTGTGAGATACCAGTTCAGGGTCATAGCCGTGAACGAAGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAGCTGTAGAACTTCCATaGCTTTCAACAGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSAVELP*LSTDPF
Trigger: GAAGGGATCTGTTGAAAGCAATGGAAGTTCTACAGC...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCAACCAGGAAGAGAATTaGGATTTTCCCAACCCTTGG +
Preference number: 5 (lower is better)
Translates to: EQWALSACSRIKQPSDHRNQEEN*DFPNPW
Trigger: CCAAGGGTTGGGAAAATCCAAATTCTCTTCCTGGTT...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS CCA 90 bp AGCATGAAGCATGTAAACGGAGATAGAAGGAGACAGAGGCAAGATTaGTCAAGCAAATTGCATTTGTGCCGTATGTGCAGCTCATTGTCC +
Preference number: 5 (lower is better)
Translates to: SMKHVNGDRRRQRQD*SSKLHLCRMCSSLS
Trigger: GGACAATGAGCTGCACATACGGCACAAATGCAATTTGCTTGACCAATCTTGCCTCTGTCTCCTTCTATCTCCGTTTACATGCTTCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489224.5
CDS-3UTR CAA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACAGACAGGATTATGGTTaGCAGTTTACAGCACCTGCG +
Preference number: 5 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNRQDYG*QFTAPA
Trigger: CGCAGGTGCTGTAAACTGCAAACCATAATCCTGTCT...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CAA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACGTAAAAGCGGCTCCATaGCTCTTCAGGAAGAAGACA +
Preference number: 5 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNVKAAP*LFRKKT
Trigger: TGTCTTCTTCCTGAAGAGCAATGGAGCCGCTTTTAC...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ATGTGTAAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCTGAATGTTCCTGAATaGTTCGATGGAATTATCCGA +
Preference number: 5 (lower is better)
Translates to: MCKGGRPLGGLHGRTIGSLNVPE*FDGIIR
Trigger: TCGGATAATTCCATCGAACAATTCAGGAACATTCAG...AGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTTACACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAGCAGCGGTATTTCCCTaGAAAGTGAGATATGTGCCC +
Preference number: 5 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIAAVFP*KVRYVP
Trigger: GGGCACATATCTCACTTTCAAGGGAAATACCGCTGC...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCACGATTCCCAGTTTATTaGAAGCAAAGCAGCGGTATT +
Preference number: 5 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSRFPVY*KQSSGI
Trigger: AATACCGCTGCTTTGCTTCAAATAAACTGGGAATCG...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTCGATTCCCAGTTTATTaGAAGCAAAGCAGCGGTATT +
Preference number: 5 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTIRFPVY*KQSSGI
Trigger: AATACCGCTGCTTTGCTTCAAATAAACTGGGAATCG...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTGGAGGCAACAGCAGTTaGGGTTTTCTTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: CSFEQINMEGWGEPVALLGGNSS*GFLCLM
Trigger: CATCAAGCAAAGAAAACCCAAACTGCTGTTGCCTCC...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAAAGTCACCACCAATTTaGTTCCAATCAACCTGTGGA +
Preference number: 5 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSKSPPI*FQSTCG
Trigger: TCCACAGGTTGATTGGAACAAAATTGGTGGTGACTT...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGTCAACTGGGGAGCCATaGACTCTCCACTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMSTGEP*TLHLIV
Trigger: CACAATCAAGTGGAGAGTCAATGGCTCCCCAGTTGA...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTTCTTCGGTGGTTCTGTaGATCTGCAATGTGCCATTT +
Preference number: 5 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSSSVVL*ICNVPF
Trigger: AAATGGCACATTGCAGATCAACAGAACCACCGAAGA...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCATATACTCGCTAATATaGCTGTTGTGGTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: EQWALSACSRIKQPSDHRIYSLI*LLWSAP
Trigger: TGGAGCTGACCACAACAGCAATATTAGCGAGTATAT...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCAATCATTTCCTTGGGTaGAGAGGCTTGAACCCTTAT +
Preference number: 5 (lower is better)
Translates to: EQWALSACSRIKQPSDHRNHFLG*RGLNPY
Trigger: ATAAGGGTTCAAGCCTCTCAACCCAAGGAAATGATT...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCATCCAATAAACCAGCCTaGAGTGGAGATGTCATCATA +
Preference number: 5 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSSNKPA*SGDVII
Trigger: TATGATGACATCTCCACTCAAGGCTGGTTTATTGGA...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGGACCGAAGGCTTCCTTaGAGAGGCTTTTCATCACTG +
Preference number: 5 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMDRRLP*RGFSSL
Trigger: CAGTGATGAAAAGCCTCTCAAAGGAAGCCTTCGGTC...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAGACCGAAGGCTTCCTTaGAGAGGCTTTTCATCACTG +
Preference number: 5 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRDRRLP*RGFSSL
Trigger: CAGTGATGAAAAGCCTCTCAAAGGAAGCCTTCGGTC...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTTCACGAGTGGGCAATTaGCAAACAAGCATCACCAAT +
Preference number: 5 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSSRVGN*QTSITN
Trigger: ATTGGTGATGCTTGTTTGCAAATTGCCCACTCGTGA...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAAGACAGGATTATGGTTaGCAGTTTACAGCACCTGCG +
Preference number: 5 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIRQDYG*QFTAPA
Trigger: CGCAGGTGCTGTAAACTGCAAACCATAATCCTGTCT...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CAA 90 bp TGCAGCGATAATTTCCTTTGTCCTGGTAGGAGACATTCTCTATCTTCAAAGTCTGCAGCGGTATTTCCCTaGAAAGTGAGATATGTGCCC +
Preference number: 5 (lower is better)
Translates to: CSDNFLCPGRRHSLSSKSAAVFP*KVRYVP
Trigger: GGGCACATATCTCACTTTCAAGGGAAATACCGCTGC...AGACTTTGAAGATAGAGAATGTCTCCTACCAGGACAAAGGAAATTATCGCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp CATATAAACCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTGAAAAATGCAAAGGTGGGAGGCCTTaGGGAGGATTGCATGGGAGG +
Preference number: 5 (lower is better)
Translates to: HINQHILSLLSQLHLEKCKGGRP*GGLHGR
Trigger: CCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT...GCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGGTTTATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAAAAGGTGGGAGGCCTTaGGGAGGATTGCATGGGAGG +
Preference number: 5 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLKGGRP*GGLHGR
Trigger: CCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTT...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp GTTTTCTGGTGGATCCGGAACATCAAGAACAGTTACTTGAGTTATATCGGCAGCCCTTTTCTTCCACGTTaGCGAAGTATAGATCTCCCT +
Preference number: 5 (lower is better)
Translates to: VFWWIRNIKNSYLSYIGSPFLPR*RSIDLP
Trigger: AGGGAGATCTATACTTCGCAAACGTGGAAGAAAAGG...GCTGCCGATATAACTCAAGTAACTGTTCTTGATGTTCCGGATCCACCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp TGGATTTTCCCAACCCTTGGACAGTTCTCTAGGAACTCATGCCCACCAACCATTTTGGGTTTTCTTTGCTaGATGGAATTTGCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: WIFPTLGQFSRNSCPPTILGFLC*MEFALE
Trigger: TTCCAAGGCAAATTCCATCAAGCAAAGAAAACCCAA...AATGGTTGGTGGGCATGAGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTTTGTTTCTCTCCCCTTaGGTAAGTCACCACCAATTT +
Preference number: 5 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSLFLSP*VSHHQF
Trigger: AAATTGGTGGTGACTTACCAAAGGGGAGAGAAACAA...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACCATAACAAGATGCCATaGCTTCCGGTGCTATACACA +
Preference number: 5 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNHNKMP*LPVLYT
Trigger: TGTGTATAGCACCGGAAGCAATGGCATCTTGTTATG...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTACATCAATATTGGCATaGGCAAGGATAGTTCCATGG +
Preference number: 5 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSTSILA*ARIVPW
Trigger: CCATGGAACTATCCTTGCCAATGCCAATATTGATGT...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCTCCACAACATCAATATaGGCATTGGCAAGGATAGTT +
Preference number: 5 (lower is better)
Translates to: EQWALSACSRIKQPSDHRSTTSI*ALARIV
Trigger: AACTATCCTTGCCAATGCCAATATTGATGTTGTGGA...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TGTTCCCAAGAAATTGCTGGCTGTGCAGCGATAATTTCCTTTGTCCTGGTAGGATTCTCCATCTTTGGTTaGTATCAATGGACGGACATC +
Preference number: 5 (lower is better)
Translates to: CSQEIAGCAAIISFVLVGFSIFG*YQWTDI
Trigger: GATGTCCGTCCATTGATACAAACCAAAGATGGAGAA...TCCTACCAGGACAAAGGAAATTATCGCTGCACAGCCAGCAATTTCTTGGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGTCGCTAATATTGCTGTaGTGGTCAGCTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRSLILL*WSAPAS
Trigger: GGAAGCTGGAGCTGACCACAACAGCAATATTAGCGA...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp ATGTGTAAAGGTGGGAGGCCTTTGGGAGGATTGCATGGGAGGACAATTGGATCTCATATTCTCTCCCTCTaGTCTCAATTACATCTTGAA +
Preference number: 5 (lower is better)
Translates to: MCKGGRPLGGLHGRTIGSHILSL*SQLHLE
Trigger: TTCAAGATGTAATTGAGACAAGAGGGAGAGAATATG...AGATCCAATTGTCCTCCCATGCAATCCTCCCAAAGGCCTCCCACCTTTACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTGCTGTAGAACTTCCATaGCTTTCAACAGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: CSFEQINMEGWGEPVALLAVELP*LSTDPF
Trigger: GAAGGGATCTGTTGAAAGCAATGGAAGTTCTACAGC...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ACAACCTTGCCCTCCTCACAAGCTGTGCACCACAGTTTTCTCCCAGATAAATCAGCCCACCAACCATTCTaGAGACTATATACAATCAAT +
Preference number: 5 (lower is better)
Translates to: TTLPSSQAVHHSFLPDKSAHQPF*RLYTIN
Trigger: ATTGATTGTATATAGTCTCAAGAATGGTTGGTGGGC...TGATTTATCTGGGAGAAAACTGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAGGATTTTCCCAACCCTaGGACAGTTCTCTAGGAACT +
Preference number: 5 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRGFSQP*DSSLGT
Trigger: AGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCC...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTTTGATGGAATTTGCCTaGGAACCAATTTCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSLMEFA*EPISVD
Trigger: ATCCACAGAAATTGGTTCCAAGGCAAATTCCATCAA...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGGGAGGCAACAGCAGTTaGGGTTTTCTTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRGGNSS*GFLCLM
Trigger: CATCAAGCAAAGAAAACCCAAACTGCTGTTGCCTCC...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACAAGTCACCACCAATTTaGTTCCAATCAACCTGTGGA +
Preference number: 5 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNKSPPI*FQSTCG
Trigger: TCCACAGGTTGATTGGAACAAAATTGGTGGTGACTT...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCATAACAAGATGCCATaGCTTCCGGTGCTATACACA +
Preference number: 5 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMHNKMP*LPVLYT
Trigger: TGTGTATAGCACCGGAAGCAATGGCATCTTGTTATG...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTCCACTTGATTGTGGGTaGAGGTTCTCCTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PSCLNYILKNAIIIAPILPLDCG*RFSFSL
Trigger: GAGGCTGAAGGAGAACCTCAACCCACAATCAAGTGG...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGTCAACTGGGGAGCCATaGACTCTCCACTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWSTGEP*TLHLIV
Trigger: CACAATCAAGTGGAGAGTCAATGGCTCCCCAGTTGA...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTACATCAATATTGGCATaGGCAAGGATAGTTCCATGG +
Preference number: 5 (lower is better)
Translates to: CSFEQINMEGWGEPVALLTSILA*ARIVPW
Trigger: CCATGGAACTATCCTTGCCAATGCCAATATTGATGT...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATCTTCGGTGGTTCTGTaGATCTGCAATGTGCCATTT +
Preference number: 5 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRSSVVL*ICNVPF
Trigger: AAATGGCACATTGCAGATCAACAGAACCACCGAAGA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAATCGCTAATATTGCTGTaGTGGTCAGCTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKSLILL*WSAPAS
Trigger: GGAAGCTGGAGCTGACCACAACAGCAATATTAGCGA...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACAGAATGTTCACTTCTTaGGGATGTGTTCTTCCATCC +
Preference number: 5 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNRMFTS*GCVLPS
Trigger: GGATGGAAGAACACATCCCAAAGAAGTGAACATTCT...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TATAACGTCCACCCCATGGATCACTGGAGCTGTATCAGGATAGTCTTCTCCAGATACTCCTTCTGGTGTTaGAAATATATAAGGCTCACT +
Preference number: 5 (lower is better)
Translates to: YNVHPMDHWSCIRIVFSRYSFWC*KYIRLT
Trigger: AGTGAGCCTTATATATTTCAAACACCAGAAGGAGTA...TCTGGAGAAGACTATCCTGATACAGCTCCAGTGATCCATGGGGTGGACGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGTGTCGAGCGCTGAACTaGACCGACATGTATGCATCA +
Preference number: 5 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWCRALN*TDMYAS
Trigger: TGATGCATACATGTCGGTCAAGTTCAGCGCTCGACA...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp GAACAATGGGCACTTTCTGCCTGTTCTCGTATAAAACAACCTTCTGACCACCGCTTTAAAAACCACGTTTaGGCTGATGACAAAGAAGAG +
Preference number: 5 (lower is better)
Translates to: EQWALSACSRIKQPSDHRFKNHV*ADDKEE
Trigger: CTCTTCTTTGTCATCAGCCAAAACGTGGTTTTTAAA...GCGGTGGTCAGAAGGTTGTTTTATACGAGAACAGGCAGAAAGTGCCCATTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS TCA 90 bp TGTAGAGATAAGTACCATCAAGCAGTCTCGGCACATTACCCAAGGTaGCCACACAGCACATGTTTTATCATGATCTTCTGCAGCAAAAAT +
Preference number: 5 (lower is better)
Translates to: CRDKYHQAVSAHYPR*PHSTCFIMIFCSKN
Trigger: ATTTTTGCTGCAGAAGATCATGATAAAACATGTGCTGTGTGGTCACCTTGGGTAATGTGCCGAGACTGCTTGATGGTACTTATCTCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489224.5
CDS CCA 90 bp GCATATTTATTTAACAGAGGTGAACTTCTTGACCAGGGTCCCACTTaGCTATGTGGGGCTATCAGAAACCTGATAGTTAAGGCAACATTA +
Preference number: 5 (lower is better)
Translates to: AYLFNRGELLDQGPT*LCGAIRNLIVKATL
Trigger: TAATGTTGCCTTAACTATCAGGTTTCTGATAGCCCCACATAGCCAAGTGGGACCCTGGTCAAGAAGTTCACCTCTGTTAAATAAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489224.5
CDS-3UTR CAA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAGTAAAAGCGGCTCCATaGCTCTTCAGGAAGAAGACA +
Preference number: 5 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKVKAAP*LFRKKT
Trigger: TGTCTTCTTCCTGAAGAGCAATGGAGCCGCTTTTAC...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACTGCATGGGAGGACAATaGGATCTCCCTCCTCCACTT +
Preference number: 5 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYCMGGQ*DLPPPL
Trigger: AAGTGGAGGAGGGAGATCCAATTGTCCTCCCATGCA...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTTTGGGTTTTCTTTGCTaGATGGAATTTGCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: CSFEQINMEGWGEPVALLLGFLC*MEFALE
Trigger: TTCCAAGGCAAATTCCATCAAGCAAAGAAAACCCAA...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTCAGTTTGGGTTTTCTTaGCTTGATGGAATTTGCCTT +
Preference number: 5 (lower is better)
Translates to: CSFEQINMEGWGEPVALLQFGFS*LDGICL
Trigger: AAGGCAAATTCCATCAAGCAAAGAAAACCCAAACTG...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGAGCAAGATTTCCCCTTaGAGGATGGTAATTGAAGAC +
Preference number: 5 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMSKISP*RMVIED
Trigger: GTCTTCAATTACCATCCTCAAAGGGGAAATCTTGCT...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAGCAAGATTTCCCCTTaGAGGATGGTAATTGAAGAC +
Preference number: 5 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRSKISP*RMVIED
Trigger: GTCTTCAATTACCATCCTCAAAGGGGAAATCTTGCT...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAAGCAAGATTTCCCCTTaGAGGATGGTAATTGAAGAC +
Preference number: 5 (lower is better)
Translates to: CIRRKTHQVATSMQTHRISKISP*RMVIED
Trigger: GTCTTCAATTACCATCCTCAAAGGGGAAATCTTGCT...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGAAGTCACCACCAATTTaGTTCCAATCAACCTGTGGA +
Preference number: 5 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMKSPPI*FQSTCG
Trigger: TCCACAGGTTGATTGGAACAAAATTGGTGGTGACTT...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATATTGTTTCTCTCCCCTTaGGTAAGTCACCACCAATTT +
Preference number: 5 (lower is better)
Translates to: CIRRKTHQVATSMQTHRILFLSP*VSHHQF
Trigger: AAATTGGTGGTGACTTACCAAAGGGGAGAGAAACAA...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATTGTTTCTCTCCCCTTaGGTAAGTCACCACCAATTT +
Preference number: 5 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRLFLSP*VSHHQF
Trigger: AAATTGGTGGTGACTTACCAAAGGGGAGAGAAACAA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGCATAACAAGATGCCATaGCTTCCGGTGCTATACACA +
Preference number: 5 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRHNKMP*LPVLYT
Trigger: TGTGTATAGCACCGGAAGCAATGGCATCTTGTTATG...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGCCACTTGATTGTGGGTaGAGGTTCTCCTTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWPLDCG*RFSFSL
Trigger: GAGGCTGAAGGAGAACCTCAACCCACAATCAAGTGG...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGTCAACTGGGGAGCCATaGACTCTCCACTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: FSPSLVCINGRTSTTSILSTGEP*TLHLIV
Trigger: CACAATCAAGTGGAGAGTCAATGGCTCCCCAGTTGA...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATTCTCCATCTTTGGTTaGTATCAATGGACGGACATC +
Preference number: 5 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRFSIFG*YQWTDI
Trigger: GATGTCCGTCCATTGATACAAACCAAAGATGGAGAA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GTTTTCTGGTGGATCCGGAACATCAAGAACAGTTACTTGAGTTATATCGGCAGCATCAAGAACAGTTACTaGAGTTATATCGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: VFWWIRNIKNSYLSYIGSIKNSY*SYIGST
Trigger: AGTGCTGCCGATATAACTCAAGTAACTGTTCTTGAT...GCTGCCGATATAACTCAAGTAACTGTTCTTGATGTTCCGGATCCACCAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGTCGCTAATATTGCTGTaGTGGTCAGCTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: FSPSLVCINGRTSTTSILSLILL*WSAPAS
Trigger: GGAAGCTGGAGCTGACCACAACAGCAATATTAGCGA...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATATTGAACCCTTATGTTTaGTGGATTCCTATCTGGAGC +
Preference number: 5 (lower is better)
Translates to: CIRRKTHQVATSMQTHRILNPYV*WIPIWS
Trigger: GCTCCAGATAGGAATCCACAAAACATAAGGGTTCAA...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCCAGTTCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTCATATTCTCTCCCTCTaGTCTCAATTACATCTTGAA +
Preference number: 5 (lower is better)
Translates to: ASSQRLYTNVHTEKNPPSHILSL*SQLHLE
Trigger: TTCAAGATGTAATTGAGACAAGAGGGAGAGAATATG...ACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGAACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CAA 90 bp GACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGTCCAATAAACCAGCCTaGAGTGGAGATGTCATCATA +
Preference number: 5 (lower is better)
Translates to: DCIPMCIRRKTHQVATSMSNKPA*SGDVII
Trigger: TATGATGACATCTCCACTCAAGGCTGGTTTATTGGA...CATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATCCAATAAACCAGCCTaGAGTGGAGATGTCATCATA +
Preference number: 5 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRSNKPA*SGDVII
Trigger: TATGATGACATCTCCACTCAAGGCTGGTTTATTGGA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGCGTTGCTTACATATGTaGTGTTTATGCCCGAAGGGG +
Preference number: 5 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWRCLHM*CLCPKG
Trigger: CCCCTTCGGGCATAAACACAACATATGTAAGCAACG...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATAGGTGAACCAGTAGCGTaGCTTACATATGTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIGEPVA*LTYVVF
Trigger: AAACACAACATATGTAAGCAACGCTACTGGTTCACC...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTACCGCTTCCATGCAGTaGAATTTAGTCCAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: CSFEQINMEGWGEPVALLTASMQ*NLVQEK
Trigger: TTTTTCTTGGACTAAATTCAACTGCATGGAAGCGGT...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS TCA 90 bp TTCATAATCCTGGATGCCATCTCCAGATCTAGAATAAGGCGTTCATaGTGCTTTCTTCACAAGACCATCCTCAGAATTACTCCCACTTTA +
Preference number: 5 (lower is better)
Translates to: FIILDAISRSRIRRS*CFLHKTILRITPTL
Trigger: TAAAGTGGGAGTAATTCTGAGGATGGTCTTGTGAAGAAAGCATCATGAACGCCTTATTCTAGATCTGGAGATGGCATCCAGGATTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470005.1
CDS-3UTR CAA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATACTGAATGTTCCTGAATaGTTCGATGGAATTATCCGA +
Preference number: 5 (lower is better)
Translates to: CIRRKTHQVATSMQTHRILNVPE*FDGIIR
Trigger: TCGGATAATTCCATCGAACAATTCAGGAACATTCAG...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAGCAGCGGTATTTCCCTaGAAAGTGAGATATGTGCCC +
Preference number: 5 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLAAVFP*KVRYVP
Trigger: GGGCACATATCTCACTTTCAAGGGAAATACCGCTGC...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCAGCGATAATTTCCTTTGTCCTGGTAGGAGACATTCTCTATCTTCAAAGTCTAAGTCACCACCAATTTaGTTCCAATCAACCTGTGGA +
Preference number: 5 (lower is better)
Translates to: CSDNFLCPGRRHSLSSKSKSPPI*FQSTCG
Trigger: TCCACAGGTTGATTGGAACAAAATTGGTGGTGACTT...AGACTTTGAAGATAGAGAATGTCTCCTACCAGGACAAAGGAAATTATCGCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp ACATTAGATATACGATTAGTCCTCTTCCAAGTAAAAGCGGCTCCATTGCTCTTCTTGTTTCTCTCCCCTTaGGTAAGTCACCACCAATTT +
Preference number: 5 (lower is better)
Translates to: TLDIRLVLFQVKAAPLLFLFLSP*VSHHQF
Trigger: AAATTGGTGGTGACTTACCAAAGGGGAGAGAAACAA...GAAGAGCAATGGAGCCGCTTTTACTTGGAAGAGGACTAATCGTATATCTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp CCAACAGACTTTTTGTTTTCCACCAATTTATCTGATAGCCTTTCAGACGTCCATCATAACAAGATGCCATaGCTTCCGGTGCTATACACA +
Preference number: 5 (lower is better)
Translates to: PTDFLFSTNLSDSLSDVHHNKMP*LPVLYT
Trigger: TGTGTATAGCACCGGAAGCAATGGCATCTTGTTATG...ATGGACGTCTGAAAGGCTATCAGATAAATTGGTGGAAAACAAAAAGTCTGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp TGCTCCTTTGAACAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTTGCTTAGCAGTATGATTTGGTaGAAGGTTGGTAAAACTGAT +
Preference number: 5 (lower is better)
Translates to: CSFEQINMEGWGEPVALLSSMIW*KVGKTD
Trigger: ATCAGTTTTACCAACCTTCAACCAAATCATACTGCT...AAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CGTATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGATCCACAACATCAATATaGGCATTGGCAAGGATAGTT +
Preference number: 5 (lower is better)
Translates to: RIKQPSDHRFHAVEFSPRSTTSI*ALARIV
Trigger: AACTATCCTTGCCAATGCCAATATTGATGTTGTGGA...TCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTATACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGTCTTCGGTGGTTCTGTaGATCTGCAATGTGCCATTT +
Preference number: 5 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWSSVVL*ICNVPF
Trigger: AAATGGCACATTGCAGATCAACAGAACCACCGAAGA...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATATCAAGCATATGCAATTaGGGGATACGAGGATTCTTA +
Preference number: 5 (lower is better)
Translates to: CIRRKTHQVATSMQTHRISSICN*GIRGFL
Trigger: TAAGAATCCTCGTATCCCCAAATTGCATATGCTTGA...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTCGCTAATATTGCTGTaGTGGTCAGCTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWSLILL*WSAPAS
Trigger: GGAAGCTGGAGCTGACCACAACAGCAATATTAGCGA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ACATTAGATATACGATTAGTCCTCTTCCAAGTAAAAGCGGCTCCATTGCTCTTCAATCATTTCCTTGGGTaGAGAGGCTTGAACCCTTAT +
Preference number: 5 (lower is better)
Translates to: TLDIRLVLFQVKAAPLLFNHFLG*RGLNPY
Trigger: ATAAGGGTTCAAGCCTCTCAACCCAAGGAAATGATT...GAAGAGCAATGGAGCCGCTTTTACTTGGAAGAGGACTAATCGTATATCTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp TCTCAGAGACTGTATACCAATGTGCATACGGAGAAAAACCCACCAAGTAGCAACTACTCCTTCTGGTGTTaGAAATATATAAGGCTCACT +
Preference number: 5 (lower is better)
Translates to: SQRLYTNVHTEKNPPSSNYSFWC*KYIRLT
Trigger: AGTGAGCCTTATATATTTCAAACACCAGAAGGAGTA...GTTGCTACTTGGTGGGTTTTTCTCCGTATGCACATTGGTATACAGTCTCTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCTCACGAGTGGGCAATTaGCAAACAAGCATCACCAAT +
Preference number: 5 (lower is better)
Translates to: FWMKSSASMFLFLYESSCSRVGN*QTSITN
Trigger: ATTGGTGATGCTTGTTTGCAAATTGCCCACTCGTGA...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAAACCAGGAAGAGAATTaGGATTTTCCCAACCCTTGG +
Preference number: 5 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKNQEEN*DFPNPW
Trigger: CCAAGGGTTGGGAAAATCCAAATTCTCTTCCTGGTT...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp TTTTCTCCATCTTTGGTTTGTATCAATGGACGGACATCCACAACATCAATATTGAGACAGGATTATGGTTaGCAGTTTACAGCACCTGGG +
Preference number: 5 (lower is better)
Translates to: FSPSLVCINGRTSTTSILRQDYG*QFTAPG
Trigger: CCCAGGTGCTGTAAACTGCAAACCATAATCCTGTCT...CAATATTGATGTTGTGGATGTCCGTCCATTGATACAAACCAAAGATGGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS CCA 90 bp CTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTaGGGTGAACCAGTAGCGTTGCTTACATATGTTGTGTTTATGCCC +
Preference number: 5 (lower is better)
Translates to: LYESSCSFEQINMEG*GEPVALLTYVVFMP
Trigger: GGGCATAAACACAACATATGTAAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGTTGATGGAATTTGCCTaGGAACCAATTTCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRLMEFA*EPISVD
Trigger: ATCCACAGAAATTGGTTCCAAGGCAAATTCCATCAA...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACGGAGGCAACAGCAGTTaGGGTTTTCTTTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYGGNSS*GFLCLM
Trigger: CATCAAGCAAAGAAAACCCAAACTGCTGTTGCCTCC...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCACATCAATATTGGCATaGGCAAGGATAGTTCCATGG +
Preference number: 5 (lower is better)
Translates to: FWMKSSASMFLFLYESSCTSILA*ARIVPW
Trigger: CCATGGAACTATCCTTGCCAATGCCAATATTGATGT...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CCCTCTTGTCTCAATTACATCTTGAAAAATGCTATCATTATCGCCCCAATTCTTTCTTCGGTGGTTCTGTaGATCTGCAATGTGCCATTT +
Preference number: 5 (lower is better)
Translates to: PSCLNYILKNAIIIAPILSSVVL*ICNVPF
Trigger: AAATGGCACATTGCAGATCAACAGAACCACCGAAGA...AAGAATTGGGGCGATAATGATAGCATTTTTCAAGATGTAATTGAGACAAGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAATATACTCGCTAATATaGCTGTTGTGGTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKIYSLI*LLWSAP
Trigger: TGGAGCTGACCACAACAGCAATATTAGCGAGTATAT...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCAATCATTTCCTTGGGTaGAGAGGCTTGAACCCTTAT +
Preference number: 5 (lower is better)
Translates to: FWMKSSASMFLFLYESSCNHFLG*RGLNPY
Trigger: ATAAGGGTTCAAGCCTCTCAACCCAAGGAAATGATT...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCAGAATGTTCACTTCTTaGGGATGTGTTCTTCCATCC +
Preference number: 5 (lower is better)
Translates to: FWMKSSASMFLFLYESSCRMFTS*GCVLPS
Trigger: GGATGGAAGAACACATCCCAAAGAAGTGAACATTCT...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TGCATACGGAGAAAAACCCACCAAGTAGCAACATCTATGCAAACACACCGAATATTTAAAAACCACGTTTaGGCTGATGACAAAGAAGAG +
Preference number: 5 (lower is better)
Translates to: CIRRKTHQVATSMQTHRIFKNHV*ADDKEE
Trigger: CTCTTCTTTGTCATCAGCCAAAACGTGGTTTTTAAA...TATTCGGTGTGTTTGCATAGATGTTGCTACTTGGTGGGTTTTTCTCCGTATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAGGATTTTCCCAACCCTaGGACAGTTCTCTAGGAACT +
Preference number: 5 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLGFSQP*DSSLGT
Trigger: AGTTCCTAGAGAACTGTCCAAGGGTTGGGAAAATCC...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAACTGAATGTTCCTGAATaGTTCGATGGAATTATCCGA +
Preference number: 5 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKLNVPE*FDGIIR
Trigger: TCGGATAATTCCATCGAACAATTCAGGAACATTCAG...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGCCTTTTCTTCCACGTTaGCGAAGTATAGATCTCCCT +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWPFLPR*RSIDLP
Trigger: AGGGAGATCTATACTTCGCAAACGTGGAAGAAAAGG...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCCAGTTTGGGTTTTCTTaGCTTGATGGAATTTGCCTT +
Preference number: 5 (lower is better)
Translates to: FWMKSSASMFLFLYESSCQFGFS*LDGICL
Trigger: AAGGCAAATTCCATCAAGCAAAGAAAACCCAAACTG...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp AGATCTATTCCTTTTGTGCTGAAGAGTCCCAGTAGTTGCCAAATAGTATTGAGGAGCAGTATGATTTGGTaGAAGGTTGGTAAAACTGAT +
Preference number: 5 (lower is better)
Translates to: RSIPFVLKSPSSCQIVLRSSMIW*KVGKTD
Trigger: ATCAGTTTTACCAACCTTCAACCAAATCATACTGCT...CCTCAATACTATTTGGCAACTACTGGGACTCTTCAGCACAAAAGGAATAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAATCAAGCATATGCAATTaGGGGATACGAGGATTCTTA +
Preference number: 5 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKSSICN*GIRGFL
Trigger: TAAGAATCCTCGTATCCCCAAATTGCATATGCTTGA...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAATCAAGAACAGTTACTaGAGTTATATCGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKIKNSY*SYIGST
Trigger: AGTGCTGCCGATATAACTCAAGTAACTGTTCTTGAT...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGCTGTAGAACTTCCATaGCTTTCAACAGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWAVELP*LSTDPF
Trigger: GAAGGGATCTGTTGAAAGCAATGGAAGTTCTACAGC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CCAAGTAGCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGACCGCTTCCATGCAGTaGAATTTAGTCCAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: PSSNIYANTPNSKIRQIWTASMQ*NLVQEK
Trigger: TTTTTCTTGGACTAAATTCAACTGCATGGAAGCGGT...CCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGCTACTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAATTTAAATATTGGCTGTaGACTTATCACGAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKFKYWL*TYHEWA
Trigger: TGCCCACTCGTGATAAGTCAACAGCCAATATTTAAA...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS CCA 90 bp GAGCATACAACTTCGATTATTTATGCACAATGTTCTAGCATCCAGTaGAATCTTTCATCACCTCTGAATGCATGTGAAGAGATGTTGAAA +
Preference number: 5 (lower is better)
Translates to: EHTTSIIYAQCSSIQ*NLSSPLNACEEMLK
Trigger: TTTCAACATCTCTTCACATGCATTCAGAGGTGATGAAAGATTCCACTGGATGCTAGAACATTGTGCATAAATAATCGAAGTTGTATGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489224.5
CDS-3UTR CAA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACCGATTCCCAGTTTATTaGAAGCAAAGCAGCGGTATT +
Preference number: 5 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYRFPVY*KQSSGI
Trigger: AATACCGCTGCTTTGCTTCAAATAAACTGGGAATCG...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CCAACAGACTTTTTGTTTTCCACCAATTTATCTGATAGCCTTTCAGACGTCCATAGCAGTATGATTTGGTaGAAGGTTGGTAAAACTGAT +
Preference number: 5 (lower is better)
Translates to: PTDFLFSTNLSDSLSDVHSSMIW*KVGKTD
Trigger: ATCAGTTTTACCAACCTTCAACCAAATCATACTGCT...ATGGACGTCTGAAAGGCTATCAGATAAATTGGTGGAAAACAAAAAGTCTGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp CTTCACATTCAATTTGAAAATACTCATCGAAGGGAAAGGCAACTTGGACTTTTGTCCACAACATCAATATaGGCATTGGCAAGGATAGTT +
Preference number: 5 (lower is better)
Translates to: LHIQFENTHRRERQLGLLSTTSI*ALARIV
Trigger: AACTATCCTTGCCAATGCCAATATTGATGTTGTGGA...CAAAAGTCCAAGTTGCCTTTCCCTTCGATGAGTATTTTCAAATTGAATGTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTTCTCCATCTTTGGTTaGTATCAATGGACGGACATC +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWFSIFG*YQWTDI
Trigger: GATGTCCGTCCATTGATACAAACCAAAGATGGAGAA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGATATACTCGCTAATATaGCTGTTGTGGTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWIYSLI*LLWSAP
Trigger: TGGAGCTGACCACAACAGCAATATTAGCGAGTATAT...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTTGAACCCTTATGTTTaGTGGATTCCTATCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWLNPYV*WIPIWS
Trigger: GCTCCAGATAGGAATCCACAAAACATAAGGGTTCAA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGAATCATTTCCTTGGGTaGAGAGGCTTGAACCCTTAT +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWNHFLG*RGLNPY
Trigger: ATAAGGGTTCAAGCCTCTCAACCCAAGGAAATGATT...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACAGAATGTTCACTTCTTaGGGATGTGTTCTTCCATCC +
Preference number: 5 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYRMFTS*GCVLPS
Trigger: GGATGGAAGAACACATCCCAAAGAAGTGAACATTCT...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp TTCTGGATGAAATCTTCGGCCAGCATGTTTCTATTCCTATATGAAAGTTCTTGCTACTCCTTCTGGTGTTaGAAATATATAAGGCTCACT +
Preference number: 5 (lower is better)
Translates to: FWMKSSASMFLFLYESSCYSFWC*KYIRLT
Trigger: AGTGAGCCTTATATATTTCAAACACCAGAAGGAGTA...GCAAGAACTTTCATATAGGAATAGAAACATGCTGGCCGAAGATTTCATCCAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAGGTGAACCAGTAGCGTaGCTTACATATGTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLGEPVA*LTYVVF
Trigger: AAACACAACATATGTAAGCAACGCTACTGGTTCACC...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp ATAAAACAACCTTCTGACCACCGCTTCCATGCAGTTGAATTTAGTCCAAGAAAAATAGGCCTGAAGTGCTaGGCATTTTATATTTTGAAG +
Preference number: 5 (lower is better)
Translates to: IKQPSDHRFHAVEFSPRKIGLKC*AFYILK
Trigger: CTTCAAAATATAAAATGCCAAGCACTTCAGGCCTAT...TTTTCTTGGACTAAATTCAACTGCATGGAAGCGGTGGTCAGAAGGTTGTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACCTGAATGTTCCTGAATaGTTCGATGGAATTATCCGA +
Preference number: 5 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYLNVPE*FDGIIR
Trigger: TCGGATAATTCCATCGAACAATTCAGGAACATTCAG...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACTCCACAACATCAATATaGGCATTGGCAAGGATAGTT +
Preference number: 5 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYSTTSI*ALARIV
Trigger: AACTATCCTTGCCAATGCCAATATTGATGTTGTGGA...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CATATAAACCAGCATATTCTCTCCCTCTTGTCTCAATTACATCTTGAAAAATGCTCAAGCATATGCAATTaGGGGATACGAGGATTCTTA +
Preference number: 5 (lower is better)
Translates to: HINQHILSLLSQLHLEKCSSICN*GIRGFL
Trigger: TAAGAATCCTCGTATCCCCAAATTGCATATGCTTGA...GCATTTTTCAAGATGTAATTGAGACAAGAGGGAGAGAATATGCTGGTTTATATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453040.5
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGATCAAGAACAGTTACTaGAGTTATATCGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWIKNSY*SYIGST
Trigger: AGTGCTGCCGATATAACTCAAGTAACTGTTCTTGAT...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACATCAAGAACAGTTACTaGAGTTATATCGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYIKNSY*SYIGST
Trigger: AGTGCTGCCGATATAACTCAAGTAACTGTTCTTGAT...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACACCGCTTCCATGCAGTaGAATTTAGTCCAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYTASMQ*NLVQEK
Trigger: TTTTTCTTGGACTAAATTCAACTGCATGGAAGCGGT...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGTTTAAATATTGGCTGTaGACTTATCACGAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWFKYWL*TYHEWA
Trigger: TGCCCACTCGTGATAAGTCAACAGCCAATATTTAAA...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGGCCCACCAACCATTCTaGAGACTATATACAATCAAT +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWAHQPF*RLYTIN
Trigger: ATTGATTGTATATAGTCTCAAGAATGGTTGGTGGGC...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS CCA 90 bp AAAGAACTTTATCTGGTACTCCAACTTAAATGGTATTATTCCATTTaGGCAAATGAAGACAGACTGAACCCATGTGACAATTCATGCAAA +
Preference number: 5 (lower is better)
Translates to: KELYLVLQLKWYYSI*ANEDRLNPCDNSCK
Trigger: TTTGCATGAATTGTCACATGGGTTCAGTCTGTCTTCATTTGCCCAAATGGAATAATACCATTTAAGTTGGAGTACCAGATAAAGTTCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471332.1
CDS-3UTR CAA 90 bp CTATTCCTATATGAAAGTTCTTGCTCCTTTGAACAGATAAATATGGAAGGTTGGAGCAGTATGATTTGGTaGAAGGTTGGTAAAACTGAT +
Preference number: 5 (lower is better)
Translates to: LFLYESSCSFEQINMEGWSSMIW*KVGKTD
Trigger: ATCAGTTTTACCAACCTTCAACCAAATCATACTGCT...CCAACCTTCCATATTTATCTGTTCAAAGGAGCAAGAACTTTCATATAGGAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACTACTCCTTCTGGTGTTaGAAATATATAAGGCTCACT +
Preference number: 5 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYYSFWC*KYIRLT
Trigger: AGTGAGCCTTATATATTTCAAACACCAGAAGGAGTA...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS-3UTR CAA 90 bp GCAACATCTATGCAAACACACCGAATAGTAAAATCAGGCAAATATGGAATATACCATATTCTCTCCCTCTaGTCTCAATTACATCTTGAA +
Preference number: 5 (lower is better)
Translates to: ATSMQTHRIVKSGKYGIYHILSL*SQLHLE
Trigger: TTCAAGATGTAATTGAGACAAGAGGGAGAGAATATG...GTATATTCCATATTTGCCTGATTTTACTATTCGGTGTGTTTGCATAGATGTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000397491.6
CDS-3UTR CAA 90 bp ACAAAACAAAGAAAGCTTTGGCTGAACCCTACTTATTTCACTATAGGAACACTAATAGGCCTGAAGTGCTaGGCATTTTATATTTTGAAG +
Preference number: 5 (lower is better)
Translates to: TKQRKLWLNPTYFTIGTLIGLKC*AFYILK
Trigger: CTTCAAAATATAAAATGCCAAGCACTTCAGGCCTAT...TAGTGTTCCTATAGTGAAATAAGTAGGGTTCAGCCAAAGCTTTCTTTGTTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS GCA 72 bp GCTCTGGGCGGATCCAGGGAGGGTCTCGCCGGCCGCTaGCCGCTGGTCCGCACCCGGGGCTGTCCGCGGAGG +
Preference number: 6 (lower is better)
Translates to: ALGGSREGLAGR*PLVRTRGCPRR
Trigger: CCTCCGCGGACAGCCCCGGGTGCGGACCAGCGGGCAGCGGCCGGCGAGACCCTCCCTGGATCCGCCCAGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000427688.5
ENST00000481167.5
CDS CCA 72 bp GAGCCGGGACGGGGGCGCGCAGGGTCCGGTAAGCTCTaGGCGGATCCAGGGAGGGTCTCGCCGGCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: EPGRGRAGSGKL*ADPGRVSPAAA
Trigger: GGCAGCGGCCGGCGAGACCCTCCCTGGATCCGCCCAGAGCTTACCGGACCCTGCGCGCCCCCGTCCCGGCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000427688.5
ENST00000481167.5
CDS CCA 72 bp CCCCTCCCGCCGCTGGCTCTCTGGCCGCGGGAAGGCTaGAGCCGTTCTGGCTGGCACCGGGGTCTACGCCCT +
Preference number: 6 (lower is better)
Translates to: PLPPLALWPREG*SRSGWHRGLRP
Trigger: AGGGCGTAGACCCCGGTGCCAGCCAGAACGGCTCCAGCCTTCCCGCGGCCAGAGAGCCAGCGGCGGGAGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000427688.5
ENST00000481167.5
CDS CCA 72 bp GCTCTCTGGCCGCGGGAAGGCTGGAGCCGTTCTGGCTaGCACCGGGGTCTACGCCCTCCTGCCGGAGGCTGG +
Preference number: 6 (lower is better)
Translates to: ALWPREGWSRSG*HRGLRPPAGGW
Trigger: CCAGCCTCCGGCAGGAGGGCGTAGACCCCGGTGCCAGCCAGAACGGCTCCAGCCTTCCCGCGGCCAGAGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000427688.5
ENST00000481167.5
CDS CCA 72 bp GCTGGCTCTCTGGCCGCGGGAAGGCTGGAGCCGTTCTaGCTGGCACCGGGGTCTACGCCCTCCTGCCGGAGG +
Preference number: 6 (lower is better)
Translates to: AGSLAAGRLEPF*LAPGSTPSCRR
Trigger: CCTCCGGCAGGAGGGCGTAGACCCCGGTGCCAGCCAGAACGGCTCCAGCCTTCCCGCGGCCAGAGAGCCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000427688.5
ENST00000481167.5
CDS TCA 72 bp TGGTTTGCAGTTTACAGCACCGGCGGCCGGCGGGCGTaGGTGGGACCCGGCGGATTCGGGCGCCCGGTGTGC +
Preference number: 6 (lower is better)
Translates to: WFAVYSTGGRRA*VGPGGFGRPVC
Trigger: GCACACCGGGCGCCCGAATCCGCCGGGTCCCACTCACGCCCGCCGGCCGCCGGTGCTGTAAACTGCAAACCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421198.5
CDS GCA 72 bp GAGCCGTTCTGGCTGGCACCGGGGTCTACGCCCTCCTaGCGGAGGCTGGCTCTCGCCTCTGCTCCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: EPFWLAPGSTPS*RRLALASAPFL
Trigger: CAGGAAGGGAGCAGAGGCGAGAGCCAGCCTCCGGCAGGAGGGCGTAGACCCCGGTGCCAGCCAGAACGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000481167.5
CDS GCA 72 bp GGGGCCAAATTGATTCCTCCACACCGCCTCTCCACTTaGTTCCCCTCTGCTGGGAACTCTGCTCTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: GAKLIPPHRLST*FPSAGNSALLA
Trigger: AGCCAGAAGAGCAGAGTTCCCAGCAGAGGGGAAGCAAGTGGAGAGGCGGTGTGGAGGAATCAATTTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449294.6
CDS GCA 72 bp ATTTTTCAATTCTTCTTACTGGGCCCGCGCGGCTGCTaGTCCTCCGGCCCGTGGTTTTTCGCAGGAGTTCCC +
Preference number: 6 (lower is better)
Translates to: IFQFFLLGPRGC*SSGPWFFAGVP
Trigger: GGGAACTCCTGCGAAAAACCACGGGCCGGAGGAGCAGCAGCCGCGCGGGCCCAGTAAGAAGAATTGAAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486881.1
CDS CAA 72 bp GGTTCTAGCCTTCTGTCCATTCCAGATGGGGCCAAATaGATTCCTCCACACCGCCTCTCCACTTGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: GSSLLSIPDGAK*IPPHRLSTCFP
Trigger: GGGGAAGCAAGTGGAGAGGCGGTGTGGAGGAATCAATTTGGCCCCATCTGGAATGGACAGAAGGCTAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449294.6
CDS TCA 72 bp CATATTTCCCTTCTCCTAAGGTGGAGCTTTCCTCCGTaGTCGGTTTTCCACAGCCCTGTGAAGTGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: HISLLLRWSFPP*SVFHSPVKCKP
Trigger: GGGCTTGCACTTCACAGGGCTGTGGAAAACCGATCACGGAGGAAAGCTCCACCTTAGGAGAAGGGAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445697.1
ENST00000620033.4
CDS CAA 72 bp TATGATTTGTTTGCAGTATTAAGACAGGATTATGGTTaGCAGTTTACAGCACCGGCGGCCGGCGGGCGTGAG +
Preference number: 6 (lower is better)
Translates to: YDLFAVLRQDYG*QFTAPAAGGRE
Trigger: CTCACGCCCGCCGGCCGCCGGTGCTGTAAACTGCAAACCATAATCCTGTCTTAATACTGCAAACAAATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421198.5
CDS CAA 90 bp CCGTATGTGCAGCTCATTGTCCTGAGAACATTTAAAAAGGAGGATTaGGTTAATCGTGTCCTCCTCAGGGTACAGGAGCCAAGCCCTGGT +
Preference number: 6 (lower is better)
Translates to: PYVQLIVLRTFKKED*VNRVLLRVQEPSPG
Trigger: ACCAGGGCTTGGCTCCTGTACCCTGAGGAGGACACGATTAACCAAATCCTCCTTTTTAAATGTTCTCAGGACAATGAGCTGCACATACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489224.5
CDS TCA 72 bp TCCCTTCTCCTTAGATCCAGCGTAGGCACCAATAAATaGTCCATCTTCACTGAAGAGACCATGGTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: SLLLRSSVGTNK*SIFTEETMVSL
Trigger: GAGGGAGACCATGGTCTCTTCAGTGAAGATGGATCATTTATTGGTGCCTACGCTGGATCTAAGGAGAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000445697.1
ENST00000620033.4
CDS GCA 72 bp CCGTATTCGACTAAGCTGTCAGCACTTTCAGTAGGCTaGATATCCCTATTAAGGGACCGAAGGCTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: PYSTKLSALSVG*ISLLRDRRLPL
Trigger: CAAAGGAAGCCTTCGGTCCCTTAATAGGGATATGCAGCCTACTGAAAGTGCTGACAGCTTAGTCGAATACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000445697.1
ENST00000620033.4
CDS CAA 72 bp GACTCACTGCCACTCTCAGTGGGAGGCAACAGCAGTTaGGGTTTTCTTTGCTTGATGGAATTTGCCTTGGAA +
Preference number: 6 (lower is better)
Translates to: DSLPLSVGGNSS*GFLCLMEFALE
Trigger: TTCCAAGGCAAATTCCATCAAGCAAAGAAAACCCAAACTGCTGTTGCCTCCCACTGAGAGTGGCAGTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS CAA 72 bp ATTAAGACAGGATTATGGTTTGCAGTTTACAGCACCTaGTGCCAGCTGGTTTCTCCCACACTCACTGCACTG +
Preference number: 6 (lower is better)
Translates to: IKTGLWFAVYST*CQLVSPTLTAL
Trigger: CAGTGCAGTGAGTGTGGGAGAAACCAGCTGGCACAAGGTGCTGTAAACTGCAAACCATAATCCTGTCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449294.6
CDS GCA 72 bp ATAGAAGGAGACAGAGGCAAGATTGGTCAAGCAAATTaGATTTGTGCCGTATGTGCAGCTCATTGTCCTGAG +
Preference number: 6 (lower is better)
Translates to: IEGDRGKIGQAN*ICAVCAAHCPE
Trigger: CTCAGGACAATGAGCTGCACATACGGCACAAATGCAATTTGCTTGACCAATCTTGCCTCTGTCTCCTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489224.5
CDS CCA 72 bp CATGTAAACGGAGATAGAAGGAGACAGAGGCAAGATTaGTCAAGCAAATTGCATTTGTGCCGTATGTGCAGC +
Preference number: 6 (lower is better)
Translates to: HVNGDRRRQRQD*SSKLHLCRMCS
Trigger: GCTGCACATACGGCACAAATGCAATTTGCTTGACCAATCTTGCCTCTGTCTCCTTCTATCTCCGTTTACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489224.5
CDS CCA 72 bp TTTAACAGAGGTGAACTTCTTGACCAGGGTCCCACTTaGCTATGTGGGGCTATCAGAAACCTGATAGTTAAG +
Preference number: 6 (lower is better)
Translates to: FNRGELLDQGPT*LCGAIRNLIVK
Trigger: CTTAACTATCAGGTTTCTGATAGCCCCACATAGCCAAGTGGGACCCTGGTCAAGAAGTTCACCTCTGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489224.5
CDS CAA 72 bp TATGATTTGTTTGCAGTATTAAGACAGGATTATGGTTaGCAGTTTACAGCACCTGCGCCGCCTCCGAAACGC +
Preference number: 6 (lower is better)
Translates to: YDLFAVLRQDYG*QFTAPAPPPKR
Trigger: GCGTTTCGGAGGCGGCGCAGGTGCTGTAAACTGCAAACCATAATCCTGTCTTAATACTGCAAACAAATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000481167.5
CDS CAA 90 bp GTAATTGAAGACTCACTGCCACTCTCAGTGGGAGGCAACAGCAGTTaGGGTTTTCTTTGCTTGATGGAATTTGCCTTGGAACCAATTTCT +
Preference number: 6 (lower is better)
Translates to: VIEDSLPLSVGGNSS*GFLCLMEFALEPIS
Trigger: AGAAATTGGTTCCAAGGCAAATTCCATCAAGCAAAGAAAACCCAAACTGCTGTTGCCTCCCACTGAGAGTGGCAGTGAGTCTTCAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256509.7
ENST00000620033.4
CDS CAA 72 bp CAGATAAATATGGAAGGTTGGGGTGAACCAGTAGCGTaGCTTACATATGTTGTGTTTATGCCCGAAGGGGAA +
Preference number: 6 (lower is better)
Translates to: QINMEGWGEPVA*LTYVVFMPEGE
Trigger: TTCCCCTTCGGGCATAAACACAACATATGTAAGCAACGCTACTGGTTCACCCCAACCTTCCATATTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256509.7
ENST00000397491.6
ENST00000620033.4
CDS CAA 90 bp TCAGAATTACTCCCACTTTATAATCATTTCCTTGGGTTGAGAGGCTaGAACCCTTATGTTTTGTGGATTCCTATCTGGAGCTGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: SELLPLYNHFLGLRG*NPYVLWIPIWSCWW
Trigger: CCACCAGCAGCTCCAGATAGGAATCCACAAAACATAAGGGTTCAAGCCTCTCAACCCAAGGAAATGATTATAAAGTGGGAGTAATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470005.1
CDS TCA 72 bp CTGGATGCCATCTCCAGATCTAGAATAAGGCGTTCATaGTGCTTTCTTCACAAGACCATCCTCAGAATTACT +
Preference number: 6 (lower is better)
Translates to: LDAISRSRIRRS*CFLHKTILRIT
Trigger: AGTAATTCTGAGGATGGTCTTGTGAAGAAAGCATCATGAACGCCTTATTCTAGATCTGGAGATGGCATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470005.1
CDS CAA 72 bp TCCTCATACATAAATCCTAGCTTTGCGGATTTCTGGTaGTGTGGTGATGGGCAAGACATTCATAATCCTGGA +
Preference number: 6 (lower is better)
Translates to: SSYINPSFADFW*CGDGQDIHNPG
Trigger: TCCAGGATTATGAATGTCTTGCCCATCACCACACAACCAGAAATCCGCAAAGCTAGGATTTATGTATGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470005.1
CDS CAA 90 bp AGACCATCCTCAGAATTACTCCCACTTTATAATCATTTCCTTGGGTaGAGAGGCTTGAACCCTTATGTTTTGTGGATTCCTATCTGGAGC +
Preference number: 6 (lower is better)
Translates to: RPSSELLPLYNHFLG*RGLNPYVLWIPIWS
Trigger: GCTCCAGATAGGAATCCACAAAACATAAGGGTTCAAGCCTCTCAACCCAAGGAAATGATTATAAAGTGGGAGTAATTCTGAGGATGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470005.1
CDS CCA 72 bp AGATCCTCATACATAAATCCTAGCTTTGCGGATTTCTaGTTGTGTGGTGATGGGCAAGACATTCATAATCCT +
Preference number: 6 (lower is better)
Translates to: RSSYINPSFADF*LCGDGQDIHNP
Trigger: AGGATTATGAATGTCTTGCCCATCACCACACAACCAGAAATCCGCAAAGCTAGGATTTATGTATGAGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470005.1
CDS CAA 72 bp AAATCTATGCATATTTATTTAACAGAGGTGAACTTCTaGACCAGGGTCCCACTTGGCTATGTGGGGCTATCA +
Preference number: 6 (lower is better)
Translates to: KSMHIYLTEVNF*TRVPLGYVGLS
Trigger: TGATAGCCCCACATAGCCAAGTGGGACCCTGGTCAAGAAGTTCACCTCTGTTAAATAAATATGCATAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489224.5
CDS CAA 90 bp GGTAACAGTAAGCAACTTCAGGCCAGAAAGTCTATCTATTTCATCTaGGAATTCACCTATCCAGCAGTGATTTTCACTCAGCAGGAACTT +
Preference number: 6 (lower is better)
Translates to: GNSKQLQARKSIYFI*EFTYPAVIFTQQEL
Trigger: AAGTTCCTGCTGAGTGAAAATCACTGCTGGATAGGTGAATTCCAAGATGAAATAGATAGACTTTCTGGCCTGAAGTTGCTTACTGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486881.1
CDS CAA 72 bp TATGATTTGTTTGCAGTATTAAGACAGGATTATGGTTaGCAGTTTACAGCACCTTGTGCCAGCTGGTTTCTC +
Preference number: 6 (lower is better)
Translates to: YDLFAVLRQDYG*QFTAPCASWFL
Trigger: GAGAAACCAGCTGGCACAAGGTGCTGTAAACTGCAAACCATAATCCTGTCTTAATACTGCAAACAAATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449294.6
CDS CAA 72 bp AAGCAACTTCAGGCCAGAAAGTCTATCTATTTCATCTaGGAATTCACCTATCCAGCAGTGATTTTCACTCAG +
Preference number: 6 (lower is better)
Translates to: KQLQARKSIYFI*EFTYPAVIFTQ
Trigger: CTGAGTGAAAATCACTGCTGGATAGGTGAATTCCAAGATGAAATAGATAGACTTTCTGGCCTGAAGTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486881.1
CDS CCA 72 bp ACTTCGATTATTTATGCACAATGTTCTAGCATCCAGTaGAATCTTTCATCACCTCTGAATGCATGTGAAGAG +
Preference number: 6 (lower is better)
Translates to: TSIIYAQCSSIQ*NLSSPLNACEE
Trigger: CTCTTCACATGCATTCAGAGGTGATGAAAGATTCCACTGGATGCTAGAACATTGTGCATAAATAATCGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489224.5
CDS CAA 72 bp TCAGAATTACTCCCACTTTATAATCATTTCCTTGGGTaGAGAGGCTTGAACCCTTATGTTTTGTGGATTCCT +
Preference number: 6 (lower is better)
Translates to: SELLPLYNHFLG*RGLNPYVLWIP
Trigger: AGGAATCCACAAAACATAAGGGTTCAAGCCTCTCAACCCAAGGAAATGATTATAAAGTGGGAGTAATTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470005.1
CDS TCA 72 bp AATACATTTATTACCTTGATTGCAGTGACAGTCTCATaGGTCCTCGGATATGTCCAAACTCATCAAATTGTA +
Preference number: 6 (lower is better)
Translates to: NTFITLIAVTVS*VLGYVQTHQIV
Trigger: TACAATTTGATGAGTTTGGACATATCCGAGGACTCATGAGACTGTCACTGCAATCAAGGTAATAAATGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489224.5
CDS TCA 72 bp GTATGGCATTTTTCATCCTCTATTTTGCATTATACTTaGGTGAGTTCTTTAATTAGATTGGAGGCTCACAAC +
Preference number: 6 (lower is better)
Translates to: VWHFSSSILHYT*VSSLIRLEAHN
Trigger: GTTGTGAGCCTCCAATCTAATTAAAGAACTCACTCAAGTATAATGCAAAATAGAGGATGAAAAATGCCATAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486881.1
CDS CAA 72 bp TCTCATGAGTCCTCGGATATGTCCAAACTCATCAAATaGTACACATTAAATATGTCGTTTGTGTATCAGTTA +
Preference number: 6 (lower is better)
Translates to: SHESSDMSKLIK*YTLNMSFVYQL
Trigger: TAACTGATACACAAACGACATATTTAATGTGTACAATTTGATGAGTTTGGACATATCCGAGGACTCATGAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489224.5