Pregenerated sensors for CHKB-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000205559Ensembl transcript IDs: ENST00000380711.3, ENST00000648558.1, ENST00000652967.1, ENST00000654355.1, ENST00000654727.1, ENST00000656328.1, ENST00000662119.1, ENST00000666183.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CGCGCCCGGGCAGTTCCTCGCCCGCGCACGCGCCGCTCCGCCAACTaGTTGGCCTCCGGCGCCTCGGATTGGCCCAGGCCGTCCAACAGC | + |
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Preference number: 5 (lower is better) Translates to: RARAVPRPRTRRSAN*LASGASDWPRPSNS Trigger: GCTGTTGGACGGCCTGGGCCAATCCGAGGCGCCGGAGGCCAATCAGTTGGCGGAGCGGCGCGTGCGCGGGCGAGGAACTGCCCGGGCGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380711.3 |
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| CDS GCA 90 bp | TCTGTAATTGGTTCTAGGCCCACCGGGTGCCCGCATCCCGCACTCTaGCCGCGCTGTGCGGCCCTGCCTAGCGCGCGCGCCTCCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SVIGSRPTGCPHPAL*PRCAALPSARASSR Trigger: CCTGGAGGAGGCGCGCGCGCTAGGCAGGGCCGCACAGCGCGGGCAGAGTGCGGGATGCGGGCACCCGGTGGGCCTAGAACCAATTACAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666183.1 |
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| CDS GCA 90 bp | AATGCAGGAGGCACGCGTTTAAATCAGGACGCCCTCAATGGGAGGTaGGCAGGCCGAGGAGGGGGCTGCGGCAAGCTGCGAGTCTTCACT | + |
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Preference number: 5 (lower is better) Translates to: NAGGTRLNQDALNGR*AGRGGGCGKLRVFT Trigger: AGTGAAGACTCGCAGCTTGCCGCAGCCCCCTCCTCGGCCTGCGCACCTCCCATTGAGGGCGTCCTGATTTAAACGCGTGCCTCCTGCATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS CCA 90 bp | AAGCAGAAATGCAGGAGGCACGCGTTTAAATCAGGACGCCCTCAATaGGAGGTGCGCAGGCCGAGGAGGGGGCTGCGGCAAGCTGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: KQKCRRHAFKSGRPQ*EVRRPRRGLRQAAS Trigger: ACTCGCAGCTTGCCGCAGCCCCCTCCTCGGCCTGCGCACCTCCCATTGAGGGCGTCCTGATTTAAACGCGTGCCTCCTGCATTTCTGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS CCA 90 bp | ATCTCGGCACAGGCTCAGGGGGCCGCCATGGTGTCAGAGAAGGCCTaGAGCAGGAAGTGCAAAGACACACAGCAGAGATGCAGCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: ISAQAQGAAMVSEKA*SRKCKDTQQRCSSV Trigger: CACAGAGCTGCATCTCTGCTGTGTGTCTTTGCACTTCCTGCTCCAGGCCTTCTCTGACACCATGGCGGCCCCCTGAGCCTGTGCCGAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000652967.1 ENST00000662119.1 |
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| CDS GCA 90 bp | CCCTCAATGGGAGGTGCGCAGGCCGAGGAGGGGGCTGCGGCAAGCTaGGAGTCTTCACTTTCTTCGGCTCTTGGGTTTGACTCTGTAATT | + |
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Preference number: 5 (lower is better) Translates to: PSMGGAQAEEGAAAS*ESSLSSALGFDSVI Trigger: AATTACAGAGTCAAACCCAAGAGCCGAAGAAAGTGAAGACTCGCAGCTTGCCGCAGCCCCCTCCTCGGCCTGCGCACCTCCCATTGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS CCA 90 bp | CCACAGATCTCTGTGGGTCCAGCGTTCCTGGTCGCCGCTCTAGCCTaGGGCAGAAGCAGAAATGCAGGAGGCACGCGTTTAAATCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: PQISVGPAFLVAALA*GRSRNAGGTRLNQD Trigger: GTCCTGATTTAAACGCGTGCCTCCTGCATTTCTGCTTCTGCCCCAGGCTAGAGCGGCGACCAGGAACGCTGGACCCACAGAGATCTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS TCA 90 bp | ACAGTCCACTGTTCAAGCACAGGGGTAGCCAGGGGCACAGCTGACTaGCATCCCATCCATCCTGCTGTTCACCAACTCCTCTGGGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TVHCSSTGVARGTAD*HPIHPAVHQLLWVW Trigger: CCAGACCCAGAGGAGTTGGTGAACAGCAGGATGGATGGGATGTCAGTCAGCTGTGCCCCTGGCTACCCCTGTGCTTGAACAGTGGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000652967.1 ENST00000654355.1 |
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| CDS TCA 90 bp | ACAGTCCACTGTTCAAGCACAGGGGTAGCCAGGGGCACAGCTGACTaGCATCCCATCCATCCTGCTGTTCACCAACTCCTCCACGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: TVHCSSTGVARGTAD*HPIHPAVHQLLHAQ Trigger: CTGAGCGTGGAGGAGTTGGTGAACAGCAGGATGGATGGGATGTCAGTCAGCTGTGCCCCTGGCTACCCCTGTGCTTGAACAGTGGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648558.1 |
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| CDS CCA 90 bp | TGGAGTGCAGTGGCACAATCTCGGCACAGGCTCAGGGGGCCGCCATaGTGTCAGAGAAGGCCGTTTATCAGGATCAAGTATCCCCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: WSAVAQSRHRLRGPP*CQRRPFIRIKYPLL Trigger: AAGGAGGGGATACTTGATCCTGATAAACGGCCTTCTCTGACACCATGGCGGCCCCCTGAGCCTGTGCCGAGATTGTGCCACTGCACTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654355.1 |
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| CDS CCA 90 bp | CCTGGCTTGCCCTCAAACGCTGCACCCCTGAGAATGTCACTGATATaGCAGGCTCCAGAACTTCTGAGGGCTTCTCGCTCATCCTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: PGLPSNAAPLRMSLI*QAPELLRASRSSSD Trigger: GTCAGAGGATGAGCGAGAAGCCCTCAGAAGTTCTGGAGCCTGCCATATCAGTGACATTCTCAGGGGTGCAGCGTTTGAGGGCAAGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS TCA 90 bp | CACAGCAGAGATGCAGCTCTGTGTCCACTGCAGTTAAAGGTGGGCTaGGGGCATCAGCCAAGACACCATCTCCTGCCCCTCTCAGATCTA | + |
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Preference number: 5 (lower is better) Translates to: HSRDAALCPLQLKVG*GHQPRHHLLPLSDL Trigger: TAGATCTGAGAGGGGCAGGAGATGGTGTCTTGGCTGATGCCCTCAGCCCACCTTTAACTGCAGTGGACACAGAGCTGCATCTCTGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000652967.1 ENST00000662119.1 |
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| CDS CCA 90 bp | CACAGCTTCTCCCAAGTAACAGATATTCAGCAGCCACCTCCTCCTTaGCCTCACCCTCACCAGCATTCCAGCTTGTCTCCATGGCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: HSFSQVTDIQQPPPP*PHPHQHSSLSPWLA Trigger: GGCAAGCCATGGAGACAAGCTGGAATGCTGGTGAGGGTGAGGCCAAGGAGGAGGTGGCTGCTGAATATCTGTTACTTGGGAGAAGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652967.1 ENST00000662119.1 |
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| CDS GCA 90 bp | ACTTGGCATGGAAGCACCAAGACAGACCTAGATGAATCCTCTAAGTaGCAGATCAATGCCTGCTTGCCCCGTTACGCAGCAGCCACGCTA | + |
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Preference number: 5 (lower is better) Translates to: TWHGSTKTDLDESSK*QINACLPRYAAATL Trigger: TAGCGTGGCTGCTGCGTAACGGGGCAAGCAGGCATTGATCTGGCACTTAGAGGATTCATCTAGGTCTGTCTTGGTGCTTCCATGCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000662119.1 |
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| CDS TCA 90 bp | GATATGGCAGGCTCCAGAACTTCTGAGGGCTTCTCGCTCATCCTCTaGCATGCACGGCCTTCTTCACCATGTCCAACTAGTATGACATCA | + |
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Preference number: 5 (lower is better) Translates to: DMAGSRTSEGFSLIL*HARPSSPCPTSMTS Trigger: TGATGTCATACTAGTTGGACATGGTGAAGAAGGCCGTGCATGTCAGAGGATGAGCGAGAAGCCCTCAGAAGTTCTGGAGCCTGCCATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS GCA 90 bp | GCTGCAGAAGGCATGGTCTTGTCCAAGAACTCTAGGACAGTGTACTaGAACTCTTCCGTTGGAGTTTGCCAGAGATGCCATATAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: AAEGMVLSKNSRTVY*NSSVGVCQRCHIGS Trigger: GGACCCTATATGGCATCTCTGGCAAACTCCAACGGAAGAGTTGCAGTACACTGTCCTAGAGTTCTTGGACAAGACCATGCCTTCTGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652967.1 ENST00000654355.1 |
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| CDS TCA 90 bp | CAGCAGATCCTAAGGCTCTTTCGCTATAAAATGGCTTTCTTGGCCTaGGGCGATGTGATTCGTGATCCCATGTTGGTACACGGAGCATGC | + |
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Preference number: 5 (lower is better) Translates to: QQILRLFRYKMAFLA*GDVIRDPMLVHGAC Trigger: GCATGCTCCGTGTACCAACATGGGATCACGAATCACATCGCCTCAGGCCAAGAAAGCCATTTTATAGCGAAAGAGCCTTAGGATCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000654355.1 ENST00000654727.1 ENST00000662119.1 |
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| CDS GCA 90 bp | TCCAAGAACTCTAGGACAGTGTACTGCAACTCTTCCGTTGGAGTTTaGCAGAGATGCCATATAGGGTCCTTCCTACCCCAAATAAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SKNSRTVYCNSSVGV*QRCHIGSFLPQISP Trigger: GGGGCTTATTTGGGGTAGGAAGGACCCTATATGGCATCTCTGGCAAACTCCAACGGAAGAGTTGCAGTACACTGTCCTAGAGTTCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652967.1 ENST00000654355.1 |
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| CDS CCA 90 bp | GCCTCTTTCTTCCTTGTAAGGATGCAGGATGCAATAACTTGTCCCTaGCTTGCCCTCAAACGCTGCACCCCTGAGAATGTCACTGATATG | + |
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Preference number: 5 (lower is better) Translates to: ASFFLVRMQDAITCP*LALKRCTPENVTDM Trigger: CATATCAGTGACATTCTCAGGGGTGCAGCGTTTGAGGGCAAGCCAGGGACAAGTTATTGCATCCTGCATCCTTACAAGGAAGAAAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS TCA 90 bp | TATACGCTCCGCCCTCTGCTAGGTAAAAACATCCCAAGTATGCATTaGGACCAGAGAAGTAACCACAGGACTCGGGTTGGGAATTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: YTLRPLLGKNIPSMH*DQRSNHRTRVGNSA Trigger: AGCAGAATTCCCAACCCGAGTCCTGTGGTTACTTCTCTGGTCTCAATGCATACTTGGGATGTTTTTACCTAGCAGAGGGCGGAGCGTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS CCA 90 bp | CTGGTTATCAAACAATACTCTAGTCAGATGCCCCAAAGAACACCATaGTTCGACAGACATTGCCACAGATCTCTGTGGGTCCAGCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: LVIKQYSSQMPQRTP*FDRHCHRSLWVQRS Trigger: GGAACGCTGGACCCACAGAGATCTGTGGCAATGTCTGTCGAACCATGGTGTTCTTTGGGGCATCTGACTAGAGTATTGTTTGATAACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS CCA 90 bp | AGGGTGAGGAGTTTCAAAGGTTTCTACTTTGCGCTTCCTTACATATaGTACCAAAGGCCTGGGATCAATGTATACGCTCCGCCCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RVRSFKGFYFALPYI*YQRPGINVYAPPSA Trigger: AGCAGAGGGCGGAGCGTATACATTGATCCCAGGCCTTTGGTACCATATGTAAGGAAGCGCAAAGTAGAAACCTTTGAAACTCCTCACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS GCA 90 bp | CCTTTAGGGAAGGATTGGAGGAATATTTCTTGGTATATGCTCAGATaGTGGTATTGTAAGATCCTTCCTGAGAGGAACCAAGCCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: PLGKDWRNISWYMLR*WYCKILPERNQASL Trigger: CAAGGAGGCTTGGTTCCTCTCAGGAAGGATCTTACAATACCAGCATCTGAGCATATACCAAGAAATATTCCTCCAATCCTTCCCTAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656328.1 ENST00000666183.1 |
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| CDS CCA 90 bp | TTAGGGAAGGATTGGAGGAATATTTCTTGGTATATGCTCAGATGCTaGTATTGTAAGATCCTTCCTGAGAGGAACCAAGCCTCCTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LGKDWRNISWYMLRC*YCKILPERNQASLS Trigger: TGACAAGGAGGCTTGGTTCCTCTCAGGAAGGATCTTACAATACCAGCATCTGAGCATATACCAAGAAATATTCCTCCAATCCTTCCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656328.1 ENST00000666183.1 |
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| CDS TCA 90 bp | GCAGCATTGTTTCTGACTTACTATCTTGGAAAGGTTTCAGTAGGGTaGGGAGTTTCAAAGGTTTCTACTTTGCGCTTCCTTACATATGGT | + |
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Preference number: 5 (lower is better) Translates to: AALFLTYYLGKVSVG*GVSKVSTLRFLTYG Trigger: ACCATATGTAAGGAAGCGCAAAGTAGAAACCTTTGAAACTCCTCACCCTACTGAAACCTTTCCAAGATAGTAAGTCAGAAACAATGCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS GCA 90 bp | CAATTTTTGATTTCTTTCTGGTTATCAAACAATACTCTAGTCAGATaGCCCAAAGAACACCATGGTTCGACAGACATTGCCACAGATCTC | + |
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Preference number: 5 (lower is better) Translates to: QFLISFWLSNNTLVR*PKEHHGSTDIATDL Trigger: GAGATCTGTGGCAATGTCTGTCGAACCATGGTGTTCTTTGGGGCATCTGACTAGAGTATTGTTTGATAACCAGAAAGAAATCAAAAATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS CCA 90 bp | CTGCAATTACACCTGGAATGCAGCATTGTTTCTGACTTACTATCTTaGAAAGGTTTCAGTAGGGTGAGGAGTTTCAAAGGTTTCTACTTT | + |
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Preference number: 5 (lower is better) Translates to: LQLHLECSIVSDLLS*KGFSRVRSFKGFYF Trigger: AAAGTAGAAACCTTTGAAACTCCTCACCCTACTGAAACCTTTCCAAGATAGTAAGTCAGAAACAATGCTGCATTCCAGGTGTAATTGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS CCA 90 bp | CTGCTTTATAAGTCTTTGAGGGCGAAATACCTCTGCAATTACACCTaGAATGCAGCATTGTTTCTGACTTACTATCTTGGAAAGGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: LLYKSLRAKYLCNYT*NAALFLTYYLGKVS Trigger: TGAAACCTTTCCAAGATAGTAAGTCAGAAACAATGCTGCATTCCAGGTGTAATTGCAGAGGTATTTCGCCCTCAAAGACTTATAAAGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS GCA 72 bp | GGTTCTAGGCCCACCGGGTGCCCGCATCCCGCACTCTaGCCGCGCTGTGCGGCCCTGCCTAGCGCGCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: GSRPTGCPHPAL*PRCAALPSARA Trigger: GGCGCGCGCGCTAGGCAGGGCCGCACAGCGCGGGCAGAGTGCGGGATGCGGGCACCCGGTGGGCCTAGAACC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666183.1 |
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| CDS TCA 72 bp | GCAGTTCCTCGCCCGCGCACGCGCCGCTCCGCCAACTaGTTGGCCTCCGGCGCCTCGGATTGGCCCAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: AVPRPRTRRSAN*LASGASDWPRP Trigger: CGGCCTGGGCCAATCCGAGGCGCCGGAGGCCAATCAGTTGGCGGAGCGGCGCGTGCGCGGGCGAGGAACTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380711.3 |
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| CDS CCA 72 bp | CTCCAGGCCTCACCCACGCTCAGGACGGACGCGCGCTaGACGGCTCTTCCTTGTCGGAGCGCCCCAGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LQASPTLRTDAR*TALPCRSAPGV Trigger: GACCCCTGGGGCGCTCCGACAAGGAAGAGCCGTCCAGCGCGCGTCCGTCCTGAGCGTGGGTGAGGCCTGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666183.1 |
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| CDS CAA 72 bp | CCGCTCCGCCAACTGATTGGCCTCCGGCGCCTCGGATaGGCCCAGGCCGTCCAACAGCAGCCCCGCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PLRQLIGLRRLG*AQAVQQQPRPE Trigger: CTCTGGGCGGGGCTGCTGTTGGACGGCCTGGGCCAATCCGAGGCGCCGGAGGCCAATCAGTTGGCGGAGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380711.3 |
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| CDS CAA 90 bp | GCGCACGCGCCGCTCCGCCAACTGATTGGCCTCCGGCGCCTCGGATaGGCCCAGGCCGTCCAACAGCAGCCCCGCCCAGAGAGAGACCAT | + |
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Preference number: 6 (lower is better) Translates to: AHAPLRQLIGLRRLG*AQAVQQQPRPERDH Trigger: ATGGTCTCTCTCTGGGCGGGGCTGCTGTTGGACGGCCTGGGCCAATCCGAGGCGCCGGAGGCCAATCAGTTGGCGGAGCGGCGCGTGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380711.3 |
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| CDS CCA 72 bp | ATTGGTTCTAGGCCCACGCTCAGGACGGACGCGCGCTaGACGGCTCTTCCTTGTCGGAGCGCCCCAGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: IGSRPTLRTDAR*TALPCRSAPGV Trigger: GACCCCTGGGGCGCTCCGACAAGGAAGAGCCGTCCAGCGCGCGTCCGTCCTGAGCGTGGGCCTAGAACCAAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380711.3 ENST00000656328.1 |
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| CDS CCA 72 bp | TTCACCAACTCCTCCACGCTCAGGACGGACGCGCGCTaGACGGCTCTTCCTTGTCGGAGCGCCCCAGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: FTNSSTLRTDAR*TALPCRSAPGV Trigger: GACCCCTGGGGCGCTCCGACAAGGAAGAGCCGTCCAGCGCGCGTCCGTCCTGAGCGTGGAGGAGTTGGTGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648558.1 |
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| CDS GCA 72 bp | GGCACGCGTTTAAATCAGGACGCCCTCAATGGGAGGTaGGCAGGCCGAGGAGGGGGCTGCGGCAAGCTGCGA | + |
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Preference number: 6 (lower is better) Translates to: GTRLNQDALNGR*AGRGGGCGKLR Trigger: TCGCAGCTTGCCGCAGCCCCCTCCTCGGCCTGCGCACCTCCCATTGAGGGCGTCCTGATTTAAACGCGTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS CCA 72 bp | TGCAGGAGGCACGCGTTTAAATCAGGACGCCCTCAATaGGAGGTGCGCAGGCCGAGGAGGGGGCTGCGGCAA | + |
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Preference number: 6 (lower is better) Translates to: CRRHAFKSGRPQ*EVRRPRRGLRQ Trigger: TTGCCGCAGCCCCCTCCTCGGCCTGCGCACCTCCCATTGAGGGCGTCCTGATTTAAACGCGTGCCTCCTGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS CCA 72 bp | GTGGCACAATCTCGGCACAGGCTCAGGGGGCCGCCATaGTGTCAGAGAAGGCCTGGAGCAGGAAGTGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VAQSRHRLRGPP*CQRRPGAGSAK Trigger: CTTTGCACTTCCTGCTCCAGGCCTTCTCTGACACCATGGCGGCCCCCTGAGCCTGTGCCGAGATTGTGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000652967.1 ENST00000662119.1 |
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| CDS CCA 72 bp | TCTGTGGGTCCAGCGTTCCTGGTCGCCGCTCTAGCCTaGGGCAGAAGCAGAAATGCAGGAGGCACGCGTTTA | + |
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Preference number: 6 (lower is better) Translates to: SVGPAFLVAALA*GRSRNAGGTRL Trigger: TAAACGCGTGCCTCCTGCATTTCTGCTTCTGCCCCAGGCTAGAGCGGCGACCAGGAACGCTGGACCCACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS TCA 72 bp | AGTGATGCTGGCCTGGGACCCTGTGCTCCTTCTGCATaGCGCCGCCACTCACAGTCCACTGTTCAAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SDAGLGPCAPSA*RRHSQSTVQAQ Trigger: CTGTGCTTGAACAGTGGACTGTGAGTGGCGGCGTCATGCAGAAGGAGCACAGGGTCCCAGGCCAGCATCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS TCA 72 bp | CCACTGTTCAAGCACAGGGGTAGCCAGGGGCACAGCTaGCTGACATCCCATCCATCCTGCTGTTCACCAACT | + |
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Preference number: 6 (lower is better) Translates to: PLFKHRGSQGHS*LTSHPSCCSPT Trigger: AGTTGGTGAACAGCAGGATGGATGGGATGTCAGTCAGCTGTGCCCCTGGCTACCCCTGTGCTTGAACAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS CCA 72 bp | GTGGCACAATCTCGGCACAGGCTCAGGGGGCCGCCATaGTGTCAGAGAAGGCCGTTTATCAGGATCAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: VAQSRHRLRGPP*CQRRPFIRIKY Trigger: ATACTTGATCCTGATAAACGGCCTTCTCTGACACCATGGCGGCCCCCTGAGCCTGTGCCGAGATTGTGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654355.1 |
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| CDS GCA 72 bp | CAGATGCCCCAAAGAACACCATGGTTCGACAGACATTaGCACAGATCTCTGTGGGTCCAGCGTTCCTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: QMPQRTPWFDRH*HRSLWVQRSWS Trigger: CGACCAGGAACGCTGGACCCACAGAGATCTGTGGCAATGTCTGTCGAACCATGGTGTTCTTTGGGGCATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS GCA 72 bp | TCTTTGCAGATTCAGGCTCAGCAGAGGTATCCTTCCTaGAACCAGCAGGAGTGCCCTCGTGGAAGCGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLQIQAQQRYPS*NQQECPRGSVP Trigger: AGGAACGCTTCCACGAGGGCACTCCTGCTGGTTGCAGGAAGGATACCTCTGCTGAGCCTGAATCTGCAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000654355.1 ENST00000654727.1 ENST00000662119.1 |
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| CDS CCA 72 bp | AACCAGCAGGAGTGCCCTCGTGGAAGCGTTCCTACCTaGGAAACAGGCTCTAATCCAGCAGATCCTAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: NQQECPRGSVPT*ETGSNPADPKA Trigger: AGCCTTAGGATCTGCTGGATTAGAGCCTGTTTCCCAGGTAGGAACGCTTCCACGAGGGCACTCCTGCTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000654355.1 ENST00000654727.1 ENST00000662119.1 |
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| CDS CCA 72 bp | CCCTCAAACGCTGCACCCCTGAGAATGTCACTGATATaGCAGGCTCCAGAACTTCTGAGGGCTTCTCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PSNAAPLRMSLI*QAPELLRASRS Trigger: TGAGCGAGAAGCCCTCAGAAGTTCTGGAGCCTGCCATATCAGTGACATTCTCAGGGGTGCAGCGTTTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS TCA 72 bp | GTATCCCCTCCTTTGTGGCCTGCTGGTCCACCAGTATaGGGAGCTGAGAGTAACCTGGTGGTCTTTGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: VSPPLWPAGPPV*GAESNLVVFAD Trigger: ATCTGCAAAGACCACCAGGTTACTCTCAGCTCCTCATACTGGTGGACCAGCAGGCCACAAAGGAGGGGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000654355.1 ENST00000654727.1 ENST00000662119.1 |
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| CDS TCA 72 bp | GGCTCCAGAACTTCTGAGGGCTTCTCGCTCATCCTCTaGCATGCACGGCCTTCTTCACCATGTCCAACTAGT | + |
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Preference number: 6 (lower is better) Translates to: GSRTSEGFSLIL*HARPSSPCPTS Trigger: ACTAGTTGGACATGGTGAAGAAGGCCGTGCATGTCAGAGGATGAGCGAGAAGCCCTCAGAAGTTCTGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS GCA 72 bp | GATGTGATTCGTGATCCCATGTTGGTACACGGAGCATaGCTGAAGCTCCTGGATAGTGATGCTGGCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: DVIRDPMLVHGA*LKLLDSDAGLG Trigger: TCCCAGGCCAGCATCACTATCCAGGAGCTTCAGGCATGCTCCGTGTACCAACATGGGATCACGAATCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS CCA 72 bp | TCCCAAGTAACAGATATTCAGCAGCCACCTCCTCCTTaGCCTCACCCTCACCAGCATTCCAGCTTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SQVTDIQQPPPP*PHPHQHSSLSP Trigger: TGGAGACAAGCTGGAATGCTGGTGAGGGTGAGGCCAAGGAGGAGGTGGCTGCTGAATATCTGTTACTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652967.1 ENST00000662119.1 |
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| CDS CAA 72 bp | TCAGATGCCCCAAAGAACACCATGGTTCGACAGACATaGCCACAGATCTCTGTGGGTCCAGCGTTCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SDAPKNTMVRQT*PQISVGPAFLV Trigger: GACCAGGAACGCTGGACCCACAGAGATCTGTGGCAATGTCTGTCGAACCATGGTGTTCTTTGGGGCATCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS GCA 72 bp | CCAATAAAGGGGTCAGAGAGGTATCCTCTAGCGCGGTaGATGCTGACTCCAAAACACAGAGGTGCCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: PIKGSERYPLAR*MLTPKHRGASM Trigger: CATTGAGGCACCTCTGTGTTTTGGAGTCAGCATGCACCGCGCTAGAGGATACCTCTCTGACCCCTTTATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS GCA 72 bp | GGAAGCACCAAGACAGACCTAGATGAATCCTCTAAGTaGCAGATCAATGCCTGCTTGCCCCGTTACGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GSTKTDLDESSK*QINACLPRYAA Trigger: TGCTGCGTAACGGGGCAAGCAGGCATTGATCTGGCACTTAGAGGATTCATCTAGGTCTGTCTTGGTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000662119.1 |
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| CDS CCA 72 bp | CTGGTCCACCAGTATGAGGAGCTGAGAGTAACCTGGTaGTCTTTGCAGATTCAGGCTCAGCAGAGGTATCCT | + |
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Preference number: 6 (lower is better) Translates to: LVHQYEELRVTW*SLQIQAQQRYP Trigger: AGGATACCTCTGCTGAGCCTGAATCTGCAAAGACCACCAGGTTACTCTCAGCTCCTCATACTGGTGGACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000654355.1 ENST00000654727.1 ENST00000662119.1 |
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| CDS CCA 72 bp | CTGCTGGTCCACCAGTATGAGGAGCTGAGAGTAACCTaGTGGTCTTTGCAGATTCAGGCTCAGCAGAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: LLVHQYEELRVT*WSLQIQAQQRY Trigger: ATACCTCTGCTGAGCCTGAATCTGCAAAGACCACCAGGTTACTCTCAGCTCCTCATACTGGTGGACCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000654355.1 ENST00000654727.1 ENST00000662119.1 |
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| CDS CAA 72 bp | CACCAGTATGAGGAGCTGAGAGTAACCTGGTGGTCTTaGCAGATTCAGGCTCAGCAGAGGTATCCTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: HQYEELRVTWWS*QIQAQQRYPSC Trigger: GCAGGAAGGATACCTCTGCTGAGCCTGAATCTGCAAAGACCACCAGGTTACTCTCAGCTCCTCATACTGGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000654355.1 ENST00000654727.1 ENST00000662119.1 |
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| CDS CAA 72 bp | CCACACCTAGCACAGCTGTGTGATCGGGGACACGACTaGGCTAAGTTTGTGCAGGGCATCATCATTTACTTG | + |
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Preference number: 6 (lower is better) Translates to: PHLAQLCDRGHD*AKFVQGIIIYL Trigger: CAAGTAAATGATGATGCCCTGCACAAACTTAGCCAAGTCGTGTCCCCGATCACACAGCTGTGCTAGGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS TCA 72 bp | TTCGCTATAAAATGGCTTTCTTGGCCTGAGGCGATGTaGTTCGTGATCCCATGTTGGTACACGGAGCATGCC | + |
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Preference number: 6 (lower is better) Translates to: FAIKWLSWPEAM*FVIPCWYTEHA Trigger: GGCATGCTCCGTGTACCAACATGGGATCACGAATCACATCGCCTCAGGCCAAGAAAGCCATTTTATAGCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000648558.1 ENST00000652967.1 ENST00000654355.1 ENST00000654727.1 ENST00000662119.1 |
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| CDS TCA 72 bp | TCTAACCTTGTAAGTCCTACAGCATCACTGCTGCTGTaGCTATTGGCCAAAGCAGTTGCAAGCCTACCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SNLVSPTASLLL*LLAKAVASLPS Trigger: GCTGGGTAGGCTTGCAACTGCTTTGGCCAATAGTCACAGCAGCAGTGATGCTGTAGGACTTACAAGGTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654727.1 |
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| CDS GCA 72 bp | ATGCTGTGCCTCTTTCTTCCTTGTAAGGATGCAGGATaGAATAACTTGTCCCTGGCTTGCCCTCAAACGCTG | + |
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Preference number: 6 (lower is better) Translates to: MLCLFLPCKDAG*NNLSLACPQTL Trigger: CAGCGTTTGAGGGCAAGCCAGGGACAAGTTATTGCATCCTGCATCCTTACAAGGAAGAAAGAGGCACAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS GCA 72 bp | TCTAGGACAGTGTACTGCAACTCTTCCGTTGGAGTTTaGCAGAGATGCCATATAGGGTCCTTCCTACCCCAA | + |
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Preference number: 6 (lower is better) Translates to: SRTVYCNSSVGV*QRCHIGSFLPQ Trigger: TTGGGGTAGGAAGGACCCTATATGGCATCTCTGGCAAACTCCAACGGAAGAGTTGCAGTACACTGTCCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652967.1 ENST00000654355.1 |
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| CDS CCA 72 bp | ATCAGAGTAAGGATCCTTGGAGGGCATGCCCTTTTCTaGTCTAACCTTGTAAGTCCTACAGCATCACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: IRVRILGGHALF*SNLVSPTASLL Trigger: CAGCAGTGATGCTGTAGGACTTACAAGGTTAGACCAGAAAAGGGCATGCCCTCCAAGGATCCTTACTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654727.1 |
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| CDS CAA 90 bp | GTAAAGATACCACACCTAGCACAGCTGTGTGATCGGGGACACGACTaGGCTAAGTTTGTGCAGGGCATCATCATTTACTTGAATCCACCA | + |
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Preference number: 6 (lower is better) Translates to: VKIPHLAQLCDRGHD*AKFVQGIIIYLNPP Trigger: TGGTGGATTCAAGTAAATGATGATGCCCTGCACAAACTTAGCCAAGTCGTGTCCCCGATCACACAGCTGTGCTAGGTGTGGTATCTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS CCA 72 bp | AAACAATACTCTAGTCAGATGCCCCAAAGAACACCATaGTTCGACAGACATTGCCACAGATCTCTGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: KQYSSQMPQRTP*FDRHCHRSLWV Trigger: GACCCACAGAGATCTGTGGCAATGTCTGTCGAACCATGGTGTTCTTTGGGGCATCTGACTAGAGTATTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS TCA 72 bp | TCTCCTGCCCCTCTCAGATCTAGTCAGCTACAATATTaGGTCTACTCTGTCACGATTCTTCAAAGTAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SPAPLRSSQLQY*VYSVTILQSKG Trigger: GCCTTTACTTTGAAGAATCGTGACAGAGTAGACTCAATATTGTAGCTGACTAGATCTGAGAGGGGCAGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652967.1 ENST00000662119.1 |
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| CDS CCA 72 bp | AGTTTCAAAGGTTTCTACTTTGCGCTTCCTTACATATaGTACCAAAGGCCTGGGATCAATGTATACGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SFKGFYFALPYI*YQRPGINVYAP Trigger: CGGAGCGTATACATTGATCCCAGGCCTTTGGTACCATATGTAAGGAAGCGCAAAGTAGAAACCTTTGAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS CAA 72 bp | GACTTGGCTAAGTTTGTGCAGGGCATCATCATTTACTaGAATCCACCAAGATTTAGCAGGAGCCATTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: DLAKFVQGIIIY*NPPRFSRSHSG Trigger: ACCTGAATGGCTCCTGCTAAATCTTGGTGGATTCAAGTAAATGATGATGCCCTGCACAAACTTAGCCAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS TCA 72 bp | ACTTGGCTAAGTTTGTGCAGGGCATCATCATTTACTTaGATCCACCAAGATTTAGCAGGAGCCATTCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: TWLSLCRASSFT*IHQDLAGAIQV Trigger: AACCTGAATGGCTCCTGCTAAATCTTGGTGGATTCAAGTAAATGATGATGCCCTGCACAAACTTAGCCAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS GCA 72 bp | CCACTGCTTTATAAGTCTTTGAGGGCGAAATACCTCTaGAATTACACCTGGAATGCAGCATTGTTTCTGACT | + |
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Preference number: 6 (lower is better) Translates to: PLLYKSLRAKYL*NYTWNAALFLT Trigger: AGTCAGAAACAATGCTGCATTCCAGGTGTAATTGCAGAGGTATTTCGCCCTCAAAGACTTATAAAGCAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS CCA 72 bp | GATTGGAGGAATATTTCTTGGTATATGCTCAGATGCTaGTATTGTAAGATCCTTCCTGAGAGGAACCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: DWRNISWYMLRC*YCKILPERNQA Trigger: GGCTTGGTTCCTCTCAGGAAGGATCTTACAATACCAGCATCTGAGCATATACCAAGAAATATTCCTCCAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656328.1 ENST00000666183.1 |
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| CDS GCA 72 bp | ATTTCTTTCTGGTTATCAAACAATACTCTAGTCAGATaGCCCAAAGAACACCATGGTTCGACAGACATTGCC | + |
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Preference number: 6 (lower is better) Translates to: ISFWLSNNTLVR*PKEHHGSTDIA Trigger: GGCAATGTCTGTCGAACCATGGTGTTCTTTGGGGCATCTGACTAGAGTATTGTTTGATAACCAGAAAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380711.3 ENST00000656328.1 ENST00000666183.1 |
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| CDS GCA 72 bp | TTTGAGGGCGAAATACCTCTGCAATTACACCTGGAATaGAGCATTGTTTCTGACTTACTATCTTGGAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: FEGEIPLQLHLE*SIVSDLLSWKG Trigger: ACCTTTCCAAGATAGTAAGTCAGAAACAATGCTGCATTCCAGGTGTAATTGCAGAGGTATTTCGCCCTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS CCA 72 bp | AAGTCTTTGAGGGCGAAATACCTCTGCAATTACACCTaGAATGCAGCATTGTTTCTGACTTACTATCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: KSLRAKYLCNYT*NAALFLTYYLG Trigger: TCCAAGATAGTAAGTCAGAAACAATGCTGCATTCCAGGTGTAATTGCAGAGGTATTTCGCCCTCAAAGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS CAA 90 bp | TCCACTCAAGTTTCTTACCTGACATTAACCCTCTCAATCGTCAACTaGTCCTTCTCTTCTGGATCATTTCCATCAGCAAACAAGCATAAC | + |
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Preference number: 6 (lower is better) Translates to: STQVSYLTLTLSIVN*SFSSGSFPSANKHN Trigger: GTTATGCTTGTTTGCTGATGGAAATGATCCAGAAGAGAAGGACAAGTTGACGATTGAGAGGGTTAATGTCAGGTAAGAAACTTGAGTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654727.1 |
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| CDS GCA 72 bp | AAGGATTGGAGGAATATTTCTTGGTATATGCTCAGATaGTGGTATTGTAAGATCCTTCCTGAGAGGAACCAA | + |
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Preference number: 6 (lower is better) Translates to: KDWRNISWYMLR*WYCKILPERNQ Trigger: TTGGTTCCTCTCAGGAAGGATCTTACAATACCAGCATCTGAGCATATACCAAGAAATATTCCTCCAATCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656328.1 ENST00000666183.1 |
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| CDS CAA 72 bp | GCGAAATACCTCTGCAATTACACCTGGAATGCAGCATaGTTTCTGACTTACTATCTTGGAAAGGTTTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: AKYLCNYTWNAA*FLTYYLGKVSV Trigger: TACTGAAACCTTTCCAAGATAGTAAGTCAGAAACAATGCTGCATTCCAGGTGTAATTGCAGAGGTATTTCGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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| CDS GCA 72 bp | CTGGCAATTGAAAAGAATGTTCACCAAGTCAATAATTaGATTATCAAGAGCCAGAGGTGCATTTATCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LAIEKNVHQVNN*IIKSQRCIYRF Trigger: GAACCGATAAATGCACCTCTGGCTCTTGATAATGCAATTATTGACTTGGTGAACATTCTTTTCAATTGCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000652967.1 ENST00000654355.1 ENST00000662119.1 |
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