RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHIT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000133063

Ensembl transcript IDs: ENST00000255427.7, ENST00000367229.6, ENST00000460619.1, ENST00000479483.1, ENST00000484834.5, ENST00000491855.5, ENST00000503786.1, ENST00000506427.1, ENST00000513472.5

Found 519 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAACACCAGGCCTGTCGGGCAGCTTTGCTGGAACAGCCGCCCCGCTaGACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATAGAG +
Preference number: 1 (lower is better)
Translates to: EHQACRAALLEQPPR*TAVEAGPFPRIGIE
Trigger: CTCTATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR CCA 90 bp CGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTaGAAACTGCCCACTGGCATATGGACTCATGGGGCAAGACCTGCC +
Preference number: 1 (lower is better)
Translates to: RVALGAALWLPSPVY*KLPTGIWTHGARPA
Trigger: GGCAGGTCTTGCCCCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR CCA 90 bp GCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTaGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTC +
Preference number: 1 (lower is better)
Translates to: AAPLHSCRSWTVPED*DRAHQLCPGRTCLV
Trigger: GACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR CCA 90 bp GGCAGCTTTGCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTaGACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCT +
Preference number: 1 (lower is better)
Translates to: GSFAGTAAPLHSCRS*TVPEDWDRAHQLCP
Trigger: AGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR CCA 90 bp CCATTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTaGTTGCAGGAGAAGCCGGCAAAGTCATCTAAGTCCAGTGCCCAG +
Preference number: 1 (lower is better)
Translates to: PFSSCRSVWMRGYRP*LQEKPAKSSKSSAQ
Trigger: CTGGGCACTGGACTTAGATGACTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR CCA 90 bp TCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTaGCTGCCATCACCTGTGTACTGGAAACTGCCCACTGGCATATGG +
Preference number: 1 (lower is better)
Translates to: SEPITKERVALGAAL*LPSPVYWKLPTGIW
Trigger: CCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR GCA 90 bp CAGGTTCAGAGGGCTGACCTGGTTTTGGAACTTCAAGCTCTGGGGTaGCTGAAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCC +
Preference number: 1 (lower is better)
Translates to: QVQRADLVLELQALG*LKASMEDLQLKHSA
Trigger: GGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR CCA 90 bp GGAGTCAACAGTGTGCTTAGAGAGCCTCTTAAGTCACCACATCTTTaGGAAGAGGGGCACAAACCAAAGATTTATTTTGCAAGTGAAAGG +
Preference number: 1 (lower is better)
Translates to: GVNSVLREPLKSPHL*EEGHKPKIYFASER
Trigger: CCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAGGCTCTCTAAGCACACTGTTGACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR-3UTR TCA 90 bp CCAGGCCTGTCGGGCAGCTTTGCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGGCAGGCTGTAGAGTaGTCCTGGGCCCAGCCTCAA +
Preference number: 2 (lower is better)
Translates to: PGLSGSFAGTAAPLHSCRRQAVE*SWAQPQ
Trigger: TTGAGGCTGGGCCCAGGATCACTCTACAGCCTGCCT...TCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR-3UTR GCA 90 bp GGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGACCACAGAAAGGCCTaGAGGAGCCAGATTGCGGCC +
Preference number: 2 (lower is better)
Translates to: GTAAPLHSCRSWTVPEDWDHRKA*RSQIAA
Trigger: GGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTGGTC...CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR CAA 90 bp GCAGCATTTGCAGGAGTTGCTGAACACCAGGCCTGTCGGGCAGCTTaGCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCG +
Preference number: 2 (lower is better)
Translates to: AAFAGVAEHQACRAA*LEQPPRCTAVEAGP
Trigger: CGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR-3UTR TCA 90 bp GGAGTTGCTGAACACCAGGCCTGTCGGGCAGCTTTGCTGGAACAGCCGCCCCGCAAGCTCTGGGGTGCCTaGAGGCAAGTATGGAAGACC +
Preference number: 2 (lower is better)
Translates to: GVAEHQACRAALLEQPPRKLWGA*RQVWKT
Trigger: GGTCTTCCATACTTGCCTTCAGGCACCCCAGAGCTT...GCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR-3UTR TCA 90 bp GAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGGCAGCCTCAGGCCTGTaGGTGGCTGTAGATTCTGGA +
Preference number: 2 (lower is better)
Translates to: EQPPRCTAVEAGPFPRIGAASGL*VAVDSG
Trigger: TCCAGAATCTACAGCCACTCACAGGCCTGAGGCTGC...CCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR-3UTR TCA 90 bp GGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGTGGAAGACCTACAGCTaGAGCACAGTGCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: GTAAPLHSCRSWTVPEDWWKTYS*STVPQA
Trigger: TGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCA...CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR TCA 90 bp GGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGAAGCTCTGGGGTGCCTaGAGGCAAGTATGGAAGACC +
Preference number: 2 (lower is better)
Translates to: GTAAPLHSCRSWTVPEDWKLWGA*RQVWKT
Trigger: GGTCTTCCATACTTGCCTTCAGGCACCCCAGAGCTT...CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR GCA 90 bp CCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCCTGTCGGGCAGCTTTaGTGGAACAGCCGCCCCGCT +
Preference number: 2 (lower is better)
Translates to: PEDWDRAHQLCPGRTCLVPVGQL*WNSRPA
Trigger: AGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGG...GACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR-3UTR CCA 90 bp AGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAAACCTGCCACAGGGCCTaGCACATCCTGCACGGACCA +
Preference number: 2 (lower is better)
Translates to: RTCCTWGRALAAITCVLETCHRA*HILHGP
Trigger: TGGTCCGTGCAGGATGTGCCAGGCCCTGTGGCAGGT...TTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR-3UTR CCA 90 bp GAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCCATGTTCTGGAGACAGCCTTaGGCTGGGAGCCTGGATGCT +
Preference number: 2 (lower is better)
Translates to: EPISFALAERVLSRAGAMFWRQP*AGSLDA
Trigger: AGCATCCAGGCTCCCAGCCCAAGGCTGTCTCCAGAA...CATGGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR CAA 90 bp AGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTaGTCCAGGGCTGGGGCCATGCTCAGGTTCAGAGGGCTGACCTGG +
Preference number: 2 (lower is better)
Translates to: RIGIEPISFALAERV*SRAGAMLRFRGLTW
Trigger: CCAGGTCAGCCCTCTGAACCTGAGCATGGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR CCA 90 bp AGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAAGCCCAGCCTCAAAGCTaGGACTGGAGGGGCTTTAGC +
Preference number: 2 (lower is better)
Translates to: RTCCTWGRALAAITCVLEAQPQS*DWRGFS
Trigger: GCTAAAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGC...TTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR-3UTR CCA 90 bp CCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCAGGGGGTATCGGCCCTaGTTGCAGGAGAAGCCGGCA +
Preference number: 2 (lower is better)
Translates to: PEDWDRAHQLCPGRTCLVRGYRP*LQEKPA
Trigger: TGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCT...GACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR CAA 90 bp GGAGGGGCTTTAGCGACTCAATTCCAGGTGCAGCATTTGCAGGAGTaGCTGAACACCAGGCCTGTCGGGCAGCTTTGCTGGAACAGCCGC +
Preference number: 2 (lower is better)
Translates to: GGALATQFQVQHLQE*LNTRPVGQLCWNSR
Trigger: GCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAAAGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR CAA 90 bp GCTGGGACTGGAGGGGCTTTAGCGACTCAATTCCAGGTGCAGCATTaGCAGGAGTTGCTGAACACCAGGCCTGTCGGGCAGCTTTGCTGG +
Preference number: 2 (lower is better)
Translates to: AGTGGALATQFQVQH*QELLNTRPVGQLCW
Trigger: CCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAAAGCCCCTCCAGTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR CAA 90 bp TTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTGGTaGCAGGAGAAGCCGGCAAAGTCATCTAAGTCCAGTGCCCAGACC +
Preference number: 2 (lower is better)
Translates to: FSSCRSVWMRGYRPW*QEKPAKSSKSSAQT
Trigger: GGTCTGGGCACTGGACTTAGATGACTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR CAA 90 bp GTCCAGGGCTGGGGCCATGCTCAGGTTCAGAGGGCTGACCTGGTTTaGGAACTTCAAGCTCTGGGGTGCCTGAAGGCAAGTATGGAAGAC +
Preference number: 2 (lower is better)
Translates to: VQGWGHAQVQRADLV*ELQALGCLKASMED
Trigger: GTCTTCCATACTTGCCTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTGAGCATGGCCCCAGCCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR GCA 90 bp ATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCCAGAGCCCATCAGCTTTaGCCTGGCAGAACGTGTCTT +
Preference number: 2 (lower is better)
Translates to: IEPISFALAERVLSRAGARAHQL*PGRTCL
Trigger: AAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCT...GGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR CCA 90 bp TTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGGCCCAGCCTCAAAGCTaGGACTGGAGGGGCTTTAGC +
Preference number: 2 (lower is better)
Translates to: FPRIGIEPISFALAERVLAQPQS*DWRGFS
Trigger: GCTAAAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGC...CAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR-3UTR CCA 90 bp GCTTTGCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGTTCAGAGGGCTGACCTaGTTTTGGAACTTCAAGCTC +
Preference number: 2 (lower is better)
Translates to: ALLEQPPRCTAVEAGPFPFRGLT*FWNFKL
Trigger: GAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAA...CGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR-3UTR CCA 90 bp AGGGGCTTTAGCGACTCAATTCCAGGTGCAGCATTTGCAGGAGTTGCTGAACACGTCGGGCAGCTTTGCTaGAACAGCCGCCCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: RGFSDSIPGAAFAGVAEHVGQLC*NSRPAA
Trigger: TGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGAC...GTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAAAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR-3UTR GCA 90 bp TGCATGCTCTCTGGCCCATTTCAGGCCTTGGTTCTGGACTCAGAATTGGTTAGAGGGCCTGGCACATCCTaGACGGACCACCTTCCCACC +
Preference number: 2 (lower is better)
Translates to: CMLSGPFQALVLDSELVRGPGTS*TDHLPT
Trigger: GGTGGGAAGGTGGTCCGTGCAGGATGTGCCAGGCCC...TCTAACCAATTCTGAGTCCAGAACCAAGGCCTGAAATGGGCCAGAGAGCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR-3UTR TCA 90 bp GCTGGACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAATCAGGTTCAGAGGGCTaGCCTGGTTTTGGAACTTCA +
Preference number: 2 (lower is better)
Translates to: AGPFPRIGIEPISFALAESGSEG*PGFGTS
Trigger: TGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTGA...TTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR CCA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACAGCTGTAGAAGCTaGACCGTTCCCGAGGATTGG +
Preference number: 2 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPHSCRS*TVPEDW
Trigger: CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTG...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR CCA 90 bp CAGGTTCAGAGGGCTGACCTGGTTTTGGAACTTCAAGCTCTGGGGTGCCTGAAGAGTGGCTGTAGATTCTaGAGACAGCCTTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: QVQRADLVLELQALGCLKSGCRF*RQPWAG
Trigger: CCCAGCCCAAGGCTGTCTCCAGAATCTACAGCCACT...CTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR-3UTR TCA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAGGCAGGCTGTAGAGTaGTCCTGGGCCCAGCCTCAA +
Preference number: 2 (lower is better)
Translates to: GTNQRFILQVKGAAQETQRQAVE*SWAQPQ
Trigger: TTGAGGCTGGGCCCAGGATCACTCTACAGCCTGCCT...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
3UTR-3UTR TCA 90 bp TTAAGGCTTTACCCATTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGTGGAAGACCTACAGCTaGAGCACAGTGCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: LRLYPFSSCRSVWMRGYRWKTYS*STVPQA
Trigger: TGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCA...CCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAATGGGTAAAGCCTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR-3UTR GCA 90 bp AGGGGCTTTAGCGACTCAATTCCAGGTGCAGCATTTGCAGGAGTTGCTGAACACACAGCTGAAGCACAGTaGCACAGGCAACACCTGGCC +
Preference number: 2 (lower is better)
Translates to: RGFSDSIPGAAFAGVAEHTAEAQ*HRQHLA
Trigger: GGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGT...GTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAAAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR-3UTR GCA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTTACCCATTCAGTTCCTaGCGTAGCGTCTGGATGAGG +
Preference number: 2 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPYPFSS*RSVWMR
Trigger: CCTCATCCAGACGCTACGGCAGGAACTGAATGGGTA...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR-3UTR CCA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGGCCCAGCCTCAAAGCTaGGACTGGAGGGGCTTTAGC +
Preference number: 2 (lower is better)
Translates to: GTNQRFILQVKGAAQETQAQPQS*DWRGFS
Trigger: GCTAAAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGC...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
3UTR-3UTR CCA 90 bp TGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGTGGCATATGGACTCATaGGGCAAGACCTGCCACAGG +
Preference number: 2 (lower is better)
Translates to: CFQASEPITKERVALGAAWHMDS*GKTCHR
Trigger: CCTGTGGCAGGTCTTGCCCCATGAGTCCATATGCCA...CGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR-3UTR CCA 90 bp CAGGTTCAGAGGGCTGACCTGGTTTTGGAACTTCAAGCTCTGGGGTGCCTGAAGGGGCTGACCTGGTTTTaGAACTTCAAGCTCTGGGGT +
Preference number: 2 (lower is better)
Translates to: QVQRADLVLELQALGCLKGLTWF*NFKLWG
Trigger: ACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCC...CTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR CCA 90 bp TTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGCCATCAGCTTTGCCCTaGCAGAACGTGTCTTGTCCA +
Preference number: 2 (lower is better)
Translates to: FPRIGIEPISFALAERVLPSALP*QNVSCP
Trigger: TGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGG...CAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR TCA 90 bp AATGCTGAGTGGCTGCTCGCAGAGCGCTTAAATCAGGGAAAAGTTCTTCTCTGCCTTCCCACCTGGCTCTaGCCTGCGGATGTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: NAEWLLAERLNQGKVLLCLPTWL*PADVLE
Trigger: CTCCAAAACATCCGCAGGTCAGAGCCAGGTGGGAAG...GCAGAGAAGAACTTTTCCCTGATTTAAGCGCTCTGCGAGCAGCCACTCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR-3UTR TCA 90 bp TTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGACCTGGCCTCACATGTaGCAGGCAGTTAAGGCTTTA +
Preference number: 2 (lower is better)
Translates to: FPRIGIEPISFALAERVLTWPHM*QAVKAL
Trigger: TAAAGCCTTAACTGCCTGTCACATGTGAGGCCAGGT...CAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR-3UTR GCA 90 bp CTTAGAGAGCCTCTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGGACCACAGAAAGGCCTaGAGGAGCCAGATTGCGGCC +
Preference number: 2 (lower is better)
Translates to: LREPLKSPHLWEEGHKPKDHRKA*RSQIAA
Trigger: GGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTGGTC...CTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAGGCTCTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR-3UTR GCA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCTTCAAGCTCTGGGGTaGCTGAAGGCAAGTATGGAA +
Preference number: 2 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPLQALG*LKASME
Trigger: TTCCATACTTGCCTTCAGGCACCCCAGAGCTTGAAG...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR CCA 90 bp TCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCAAAGTCACCACATCTTTaGGAAGAGGGGCACAAACCA +
Preference number: 2 (lower is better)
Translates to: SEPITKERVALGAALWLPKSPHL*EEGHKP
Trigger: TGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTT...TGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR-3UTR CCA 90 bp GAAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGACCGTTCCCGAGGATTaGGATAGAGCCCATCAGCTT +
Preference number: 2 (lower is better)
Translates to: EGKYGRPTAEAQCHRQHLTVPED*DRAHQL
Trigger: AAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT...CAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR TCA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTGATTTATTTTGCAAGTaGAAGGGGCAGCCCAGGAGA +
Preference number: 2 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPDLFCK*KGQPRR
Trigger: TCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATC...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR-3UTR CCA 90 bp TTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTTCAGAGGGCTGACCTaGTTTTGGAACTTCAAGCTC +
Preference number: 2 (lower is better)
Translates to: FPRIGIEPISFALAERVLFRGLT*FWNFKL
Trigger: GAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAA...CAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR TCA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAAAGGCAGGCTGTAGAGTaGTCCTGGGCCCAGCCTCAA +
Preference number: 2 (lower is better)
Translates to: TNQRFILQVKGAAQETQKRQAVE*SWAQPQ
Trigger: TTGAGGCTGGGCCCAGGATCACTCTACAGCCTGCCT...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
3UTR-3UTR GCA 90 bp CGCAGAAGCTCCTGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCACACCTGGCTCTGACCTaGGGATGTTTTGGAGTCAAC +
Preference number: 2 (lower is better)
Translates to: RRSSCFQASEPITKERVAHLALT*GCFGVN
Trigger: GTTGACTCCAAAACATCCGCAGGTCAGAGCCAGGTG...TGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACAGGAGCTTCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR-3UTR TCA 90 bp CAAACAGGATTTATCTCGAAGACCCCTGAGTACCAGGGGTCTGAATTCTTAGTGGATTTATTTTGCAAGTaGAAGGGGCAGCCCAGGAGA +
Preference number: 2 (lower is better)
Translates to: QTGFISKTPEYQGSEFLVDLFCK*KGQPRR
Trigger: TCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATC...CACTAAGAATTCAGACCCCTGGTACTCAGGGGTCTTCGAGATAAATCCTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR-3UTR CAA 90 bp GAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGCCTGCAGGAGCCAGATaGCGGCCCCCAGGGAAAACC +
Preference number: 3 (lower is better)
Translates to: EQPPRCTAVEAGPFPRIGPAGAR*RPPGKT
Trigger: GGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGG...CCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR-3UTR CAA 90 bp GGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGTGGACAGGGCCCTTTTaGCTCCAGCAGCCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: GTAAPLHSCRSWTVPEDWWTGPF*LQQPQA
Trigger: GGCCTGAGGCTGCTGGAGCAAAAAGGGCCCTGTCCA...CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR CCA 72 bp GCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTaGACCGTTCCCGAGGATTGGGATAGAGCCCATCAG +
Preference number: 3 (lower is better)
Translates to: AGTAAPLHSCRS*TVPEDWDRAHQ
Trigger: CTGATGGGCTCTATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR GCA 72 bp ACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTaGCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: TVPEDWDRAHQL*PGRTCLVQGWG
Trigger: GCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR CCA 72 bp CTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTaGAAACTGCCCACTGGCATATGGACTCATGGGGCA +
Preference number: 3 (lower is better)
Translates to: LGAALWLPSPVY*KLPTGIWTHGA
Trigger: TGCCCCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR GCA 72 bp CCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTaGCATCACCTGTGTACTGGAAACTGCCCACTGGCA +
Preference number: 3 (lower is better)
Translates to: PKNVLHLGPRSG*HHLCTGNCPLA
Trigger: TGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR CCA 72 bp CCATCACCTGTGTACTGGAAACTGCCCACTGGCATATaGACTCATGGGGCAAGACCTGCCACAGGGCCTGGC +
Preference number: 3 (lower is better)
Translates to: PSPVYWKLPTGI*THGARPATGPG
Trigger: GCCAGGCCCTGTGGCAGGTCTTGCCCCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR CCA 72 bp TCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTaGTTGCAGGAGAAGCCGGCAAAGTCATCTAAGTCC +
Preference number: 3 (lower is better)
Translates to: SCRSVWMRGYRP*LQEKPAKSSKS
Trigger: GGACTTAGATGACTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR-3UTR CAA 90 bp TGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCCTGCAGGAGCCAGATaGCGGCCCCCAGGGAAAACC +
Preference number: 3 (lower is better)
Translates to: CFQASEPITKERVALGAAPAGAR*RPPGKT
Trigger: GGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGG...CGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR CCA 72 bp CTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTaGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACG +
Preference number: 3 (lower is better)
Translates to: LHSCRSWTVPED*DRAHQLCPGRT
Trigger: CGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR-3UTR CAA 90 bp ACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTAGGGCTGACCTGGTTTaGGAACTTCAAGCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: TVPEDWDRAHQLCPGRTCRADLV*ELQALG
Trigger: CCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCT...ACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR TCA 72 bp CGACTCAATTCCAGGTGCAGCATTTGCAGGAGTTGCTaGACACCAGGCCTGTCGGGCAGCTTTGCTGGAACA +
Preference number: 3 (lower is better)
Translates to: RLNSRCSICRSC*TPGLSGSFAGT
Trigger: TGTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR GCA 72 bp GAAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTaGCACAGGCAACACCTGGCCTCACATGTGACAGGC +
Preference number: 3 (lower is better)
Translates to: EGKYGRPTAEAQ*HRQHLASHVTG
Trigger: GCCTGTCACATGTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR CCA 72 bp ATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTaGCTGCCATCACCTGTGTACTGGAAACTGCCCACT +
Preference number: 3 (lower is better)
Translates to: ITKERVALGAAL*LPSPVYWKLPT
Trigger: AGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR CCA 72 bp TTAAGGCTTTACCCATTCAGTTCCTGCCGTAGCGTCTaGATGAGGGGGTATCGGCCCTGGTTGCAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: LRLYPFSSCRSV*MRGYRPWLQEK
Trigger: CTTCTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAATGGGTAAAGCCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR TCA 72 bp AAGCACAGTGCCACAGGCAACACCTGGCCTCACATGTaGCAGGCAGTTAAGGCTTTACCCATTCAGTTCCTG +
Preference number: 3 (lower is better)
Translates to: KHSATGNTWPHM*QAVKALPIQFL
Trigger: CAGGAACTGAATGGGTAAAGCCTTAACTGCCTGTCACATGTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR GCA 72 bp AATGTTGGGATGACTTTATTTAACCAGGACACCGTGTaGATGCTCTCTGGCCCATTTCAGGCCTTGGTTCTG +
Preference number: 3 (lower is better)
Translates to: NVGMTLFNQDTV*MLSGPFQALVL
Trigger: CAGAACCAAGGCCTGAAATGGGCCAGAGAGCATGCACACGGTGTCCTGGTTAAATAAAGTCATCCCAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR CCA 72 bp AGTGTGCTTAGAGAGCCTCTTAAGTCACCACATCTTTaGGAAGAGGGGCACAAACCAAAGATTTATTTTGCA +
Preference number: 3 (lower is better)
Translates to: SVLREPLKSPHL*EEGHKPKIYFA
Trigger: TGCAAAATAAATCTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAGGCTCTCTAAGCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp CACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCCCTGTCGGGCAGCTTTaGTGGAACAGCCGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: HRKACRSQIAAPRENPGGPVGQL*WNSRPA
Trigger: AGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGG...GCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGCCTGTCGGGCAGCTTTaGTGGAACAGCCGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQPVGQL*WNSRPA
Trigger: AGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGG...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGACGGCAGGGCTCCCCTaGCTTCCTGGGTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQTAGLP*LPGYSQ
Trigger: CTGGGAGTACCCAGGAAGCCAGGGGAGCCCTGCCGT...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGCCAGACCCTGTGGCTaGGGCCCCCACTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEAARPCG*GPHSGV
Trigger: GACACCAGAGTGGGGGCCCCAGCCACAGGGTCTGGC...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCGTCGGGCAGCTTTGCTaGAACAGCCGCCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: HRKACRSQIAAPRENPGGVGQLC*NSRPAA
Trigger: TGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGAC...GCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCACCACAGACCGCACCATaGTGCAGCTCAGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEAPQTAP*CSSAAG
Trigger: GCCTGCCGCTGAGCTGCATCATGGTGCGGTCTGTGG...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255427.7
ENST00000367229.6
CDS-3UTR CCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAACGGCAGGGCTCCCCTaGCTTCCTGGGTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEATAGLP*LPGYSQ
Trigger: CTGGGAGTACCCAGGAAGCCAGGGGAGCCCTGCCGT...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp ACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATACGGCAGGGCTCCCCTaGCTTCCTGGGTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: TAAPLHSCRSWTVPEDWDTAGLP*LPGYSQ
Trigger: CTGGGAGTACCCAGGAAGCCAGGGGAGCCCTGCCGT...ATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp GCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATCTGGGGCCCCCACTCTaGTGTCTGATGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGTAAPLHSCRSWTVPEDLGPPL*CLMRRP
Trigger: TGGCCTCCTCATCAGACACCAGAGTGGGGGCCCCAG...ATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTGTCGGGCAGCTTTGCTaGAACAGCCGCCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLVGQLC*NSRPAA
Trigger: TGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGAC...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGCTTGGGGCCGCGCTCTaGCTGCCATCACCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQLGAAL*LPSPVY
Trigger: GTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAG...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp GAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCCATGTCCCTCCTTCCTTGGTaGAGGGGCCTGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: EPISFALAERVLSRAGAMSLLPW*RGLECQ
Trigger: CTGGCACTCCAGGCCCCTTCACCAAGGAAGGAGGGA...CATGGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp GCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATCAGGACCATGAAACCTaGCCAGGCCACAGACCGCAC +
Preference number: 4 (lower is better)
Translates to: AGTAAPLHSCRSWTVPEDQDHET*PGHRPH
Trigger: GTGCGGTCTGTGGCCTGGGCAGGTTTCATGGTCCTG...ATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp GCTTTGCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGGCAGGGGTCCCCTTCTaGAGCCACTGTTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: ALLEQPPRCTAVEAGPFPAGVPF*SHCCTA
Trigger: TGCTGTGCAACAGTGGCTGCAGAAGGGGACCCCTGC...CGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR GCA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGGACCACAGAAAGGCCTaGAGGAGCCAGATTGCGGCC +
Preference number: 4 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQDHRKA*RSQIAA
Trigger: GGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTGGTC...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCGGTGGGTGCAAAGGCTaGGGTCCAAGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: HRKACRSQIAAPRENPGGGGCKG*GPSPWA
Trigger: TGCCCAAGGACTTGGACCCCAGCCTTTGCACCCACC...GCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GGAGTTGCTGAACACCAGGCCTGTCGGGCAGCTTTGCTGGAACAGCCGCCCCGCTGCTCAGCTGGTGGTTaGTCATGCCAGCGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: GVAEHQACRAALLEQPPRCSAGG*SCQRRR
Trigger: ACGCCTTCGCTGGCATGACCAACCACCAGCTGAGCA...GCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CCA 90 bp GCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATGCTCCCCTGGCTTCCTaGGTACTCCCAGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: AGTAAPLHSCRSWTVPEDAPLAS*VLPVKV
Trigger: GACCTTGACTGGGAGTACCCAGGAAGCCAGGGGAGC...ATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp GGAGTTGCTGAACACCAGGCCTGTCGGGCAGCTTTGCTGGAACAGCCGCCCCGCGTCTGGGCTTCCTGCTaGAAGGCATTGGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GVAEHQACRAALLEQPPRVWASC*KALAKS
Trigger: GGACTTGGCCAATGCCTTCCAGCAGGAAGCCCAGAC...GCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTCTGGGGCCCCCACTCTaGTGTCTGATGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLLGPPL*CLMRRP
Trigger: TGGCCTCCTCATCAGACACCAGAGTGGGGGCCCCAG...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAAGGGGGTATCGGCCCTaGTTGCAGGAGAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEARGYRP*LQEKPA
Trigger: TGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCT...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGCCTGTACCAGGGTTGTaGAGCGCTCCTTGTCTACGG +
Preference number: 4 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQPVPGL*SAPCLR
Trigger: CCGTAGACAAGGAGCGCTTCACAACCCTGGTACAGG...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAAAGGCGTTCCTTCCCTaGGGTCTGGGCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEAKAFLP*GLGFLL
Trigger: CAGCAGGAAGCCCAGACCTCAGGGAAGGAACGCCTT...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp TTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTGGTTGCAGGAGCAGCAGCATCCACGTTaGGGCTGGCTGCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: FSSCRSVWMRGYRPWLQEQQHPR*GWLLHH
Trigger: GTGGTGCAGCAGCCAGCCTCAACGTGGATGCTGCTG...CTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR TCA 90 bp GAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGTGGGAGCCTGGATGCTaGGTCCTCATGCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: EQPPRCTAVEAGPFPRIGWEPGC*VLMLLG
Trigger: TCCAAGCAGCATGAGGACTCAGCATCCAGGCTCCCA...CCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR GCA 90 bp GGAGTTGCTGAACACCAGGCCTGTCGGGCAGCTTTGCTGGAACAGCCGCCCCGCCACGTTGAGGCTGGCTaGTGCACCACTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GVAEHQACRAALLEQPPRHVEAG*CTTLFL
Trigger: CAAGAAGAGAGTGGTGCAGCAGCCAGCCTCAACGTG...GCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR GCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTGCAGGGGTCCCCTTCTaGAGCCACTGTTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLAGVPF*SHCCTA
Trigger: TGCTGTGCAACAGTGGCTGCAGAAGGGGACCCCTGC...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGTGCCAAGGATCAGCTTaGTGGCAGGGGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQCQGSA*WQGSPS
Trigger: AGAAGGGGACCCCTGCCAGCAAGCTGATCCTTGGCA...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp GCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGCCAAGGATCAGCTTaGTGGCAGGGGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: AGTAAPLHSCRSWTVPEDCQGSA*WQGSPS
Trigger: AGAAGGGGACCCCTGCCAGCAAGCTGATCCTTGGCA...ATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp GGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGGTATCGGCCCTGGTTaGAGGAGAAGCCGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GTAAPLHSCRSWTVPEDWGIGPG*RRSRQS
Trigger: ACTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACC...CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGTGCTCAGCTGGTGGTTaGTCATGCCAGCGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQCSAGG*SCQRRR
Trigger: ACGCCTTCGCTGGCATGACCAACCACCAGCTGAGCA...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATCCTGCTGGAAGGCATTaGCCAAGTCCTGTACCAGGG +
Preference number: 4 (lower is better)
Translates to: AGTAAPLHSCRSWTVPEDPAGRH*PSPVPG
Trigger: CCCTGGTACAGGACTTGGCCAATGCCTTCCAGCAGG...ATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp GAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGGTCTGGGCTTCCTGCTaGAAGGCATTGGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: EQPPRCTAVEAGPFPRIGVWASC*KALAKS
Trigger: GGACTTGGCCAATGCCTTCCAGCAGGAAGCCCAGAC...CCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp CCAGGCCTGTCGGGCAGCTTTGCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAATAGGTCTGCCCAGCTaGAACCGCTGCACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGLSGSFAGTAAPLHSCRIGLPS*NRCTQK
Trigger: CTTCTGAGTGCAGCGGTTCCAGCTGGGCAGACCTAT...TCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CCA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGCAAGGATCAGCTTGCTaGCAGGGGTCCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQQGSAC*QGSPSA
Trigger: TGCAGAAGGGGACCCCTGCCAGCAAGCTGATCCTTG...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGCAAGGATCAGCTTGCTaGCAGGGGTCCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: EQPPRCTAVEAGPFPRIGQGSAC*QGSPSA
Trigger: TGCAGAAGGGGACCCCTGCCAGCAAGCTGATCCTTG...CCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp ACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTGAGTGCCAGACCCTGTaGCTGGGGCCCCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: TVPEDWDRAHQLCPGRTCECQTL*LGPPLW
Trigger: CCAGAGTGGGGGCCCCAGCCACAGGGTCTGGCACTC...ACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp GATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCAGGGGGTATCGGCCCTaGTTGCAGGAGAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: DRAHQLCPGRTCLVQGWGRGYRP*LQEKPA
Trigger: TGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCT...GCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
3UTR CAA 72 bp GCAGGAGTTGCTGAACACCAGGCCTGTCGGGCAGCTTaGCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: AGVAEHQACRAA*LEQPPRCTAVE
Trigger: TTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR TCA 90 bp CACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCGAGTTGACAAAGGTCTaGCGGTTGTTGGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: HRKACRSQIAAPRENPGGELTKV*RLLAVA
Trigger: AGCCACGGCCAACAACCGTCAGACCTTTGTCAACTC...GCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp ATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCCAGGCAGGCTGTAGAGTaGTCCTGGGCCCAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: IEPISFALAERVLSRAGARQAVE*SWAQPQ
Trigger: TTGAGGCTGGGCCCAGGATCACTCTACAGCCTGCCT...GGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR GCA 90 bp ACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATGAGGTCTGGGCTTCCTaGTGGAAGGCATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TAAPLHSCRSWTVPEDWDEVWAS*WKALAK
Trigger: CTTGGCCAATGCCTTCCAGCAGGAAGCCCAGACCTC...ATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp GAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCCATGCCCAGCTGGAACCGCTaGACTCAGAAGAAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: EPISFALAERVLSRAGAMPSWNR*TQKKAF
Trigger: GAACGCCTTCTTCTGAGTGCAGCGGTTCCAGCTGGG...CATGGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp CACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCGGAAGACTCAGTTCCTaGCGTAGCGTCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: HRKACRSQIAAPRENPGGGRLSS*RSVWMR
Trigger: CCTCATCCAGACGCTACGGCAGGAACTGAGTCTTCC...GCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255427.7
ENST00000367229.6
CDS-3UTR GCA 90 bp AGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAAGGGCCGCGCTCTGGCTaGCATCACCTGTGTACTGGA +
Preference number: 4 (lower is better)
Translates to: RTCCTWGRALAAITCVLEGPRSG*HHLCTG
Trigger: TCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCC...TTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp ACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATACAGCTGAAGCACAGTaGCACAGGCAACACCTGGCC +
Preference number: 4 (lower is better)
Translates to: TAAPLHSCRSWTVPEDWDTAEAQ*HRQHLA
Trigger: GGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGT...ATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp TGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAAACTGCCGGTGGGTGCAAAGGCTaGGGTCCAAGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: CCTWGRALAAITCVLETAGGCKG*GPSPWA
Trigger: TGCCCAAGGACTTGGACCCCAGCCTTTGCACCCACC...GGCAGTTTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTTGCTCAGCTGGTGGTTaGTCATGCCAGCGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLCSAGG*SCQRRR
Trigger: ACGCCTTCGCTGGCATGACCAACCACCAGCTGAGCA...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTGTGGTGCTCAGCTGGTaGTTGGTCATGCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLVVLSW*LVMPAK
Trigger: CTTCGCTGGCATGACCAACCACCAGCTGAGCACCAC...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCACCTGCTGGAAGGCATTaGCCAAGTCCTGTACCAGGG +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEAPAGRH*PSPVPG
Trigger: CCCTGGTACAGGACTTGGCCAATGCCTTCCAGCAGG...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGTCTGGGCTTCCTGCTaGAAGGCATTGGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEAVWASC*KALAKS
Trigger: GGACTTGGCCAATGCCTTCCAGCAGGAAGCCCAGAC...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGATAGGTCTGCCCAGCTaGAACCGCTGCACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQIGLPS*NRCTQK
Trigger: CTTCTGAGTGCAGCGGTTCCAGCTGGGCAGACCTAT...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTGCCAGACCCTGTGGCTaGGGCCCCCACTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPARPCG*GPHSGV
Trigger: GACACCAGAGTGGGGGCCCCAGCCACAGGGTCTGGC...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp CAGGTTCAGAGGGCTGACCTGGTTTTGGAACTTCAAGCTCTGGGGTGCCTGAAGGCCAGACCCTGTGGCTaGGGCCCCCACTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: QVQRADLVLELQALGCLKARPCG*GPHSGV
Trigger: GACACCAGAGTGGGGGCCCCAGCCACAGGGTCTGGC...CTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp AGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACATGTGACAGAGTGCCAGACCCTGTaGCTGGGGCCCCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: RPTAEAQCHRQHLASHVTECQTL*LGPPLW
Trigger: CCAGAGTGGGGGCCCCAGCCACAGGGTCTGGCACTC...TGTCACATGTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp GCTGGACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACTTGGTGAAGGGGCCTaGAGTGCCAGACCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AGPFPRIGIEPISFALAELGEGA*SARPCG
Trigger: GCCACAGGGTCTGGCACTCCAGGCCCCTTCACCAAG...TTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp CACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCGGATTCTCTGTTTGGTaGCCCCCTTCCAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: HRKACRSQIAAPRENPGGGFSVW*PPSRSR
Trigger: TCTGCTCCTGGAAGGGGGCCACCAAACAGAGAATCC...GCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGCACAGCTGTAGAAGCTaGACCGTTCCCGAGGATTGG +
Preference number: 4 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQHSCRS*TVPEDW
Trigger: CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTG...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCCCTCAAAGCTGGGACTaGAGGGGCTTTAGCGACTCA +
Preference number: 4 (lower is better)
Translates to: HRKACRSQIAAPRENPGGPQSWD*RGFSDS
Trigger: TGAGTCGCTAAAGCCCCTCCAGTCCCAGCTTTGAGG...GCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGCCTCAAAGCTGGGACTaGAGGGGCTTTAGCGACTCA +
Preference number: 4 (lower is better)
Translates to: EQPPRCTAVEAGPFPRIGPQSWD*RGFSDS
Trigger: TGAGTCGCTAAAGCCCCTCCAGTCCCAGCTTTGAGG...CCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR TCA 90 bp CAGGTTCAGAGGGCTGACCTGGTTTTGGAACTTCAAGCTCTGGGGTGCCTGAAGCCACAGACCGCACCATaGTGCAGCTCAGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QVQRADLVLELQALGCLKPQTAP*CSSAAG
Trigger: GCCTGCCGCTGAGCTGCATCATGGTGCGGTCTGTGG...CTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR TCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGAGTTGACAAAGGTCTaGCGGTTGTTGGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEAELTKV*RLLAVA
Trigger: AGCCACGGCCAACAACCGTCAGACCTTTGTCAACTC...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp TGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAAACTGCCCCTGTACCAGGGTTGTaGAGCGCTCCTTGTCTACGG +
Preference number: 4 (lower is better)
Translates to: CCTWGRALAAITCVLETAPVPGL*SAPCLR
Trigger: CCGTAGACAAGGAGCGCTTCACAACCCTGGTACAGG...GGCAGTTTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp ACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATGGCTGTTATGTCCCGTaGCCTTCTCCCAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: TAAPLHSCRSWTVPEDWDGCYVP*PSPKSH
Trigger: ATGGCTCTTGGGAGAAGGTCACGGGACATAACAGCC...ATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp ACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCAGCAGCATCCACGTTaGGGCTGGCTGCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: TVPEDWDRAHQLCPGRTCQQHPR*GWLLHH
Trigger: GTGGTGCAGCAGCCAGCCTCAACGTGGATGCTGCTG...ACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGAAGCTCTGGGGTGCCTaGAGGCAAGTATGGAAGACT +
Preference number: 4 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQKLWGA*RQVWKT
Trigger: AGTCTTCCATACTTGCCTTCAGGCACCCCAGAGCTT...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255427.7
ENST00000367229.6
CDS-3UTR TCA 90 bp ACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATTGGAAGACCTACAGCTaGAGCACAGTGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TAAPLHSCRSWTVPEDWDWKTYS*STVPQA
Trigger: TGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCA...ATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTCACGTTGAGGCTGGCTaGTGCACCACTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLHVEAG*CTTLFL
Trigger: CAAGAAGAGAGTGGTGCAGCAGCCAGCCTCAACGTG...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp ACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATCACGTTGAGGCTGGCTaGTGCACCACTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: TAAPLHSCRSWTVPEDWDHVEAG*CTTLFL
Trigger: CAAGAAGAGAGTGGTGCAGCAGCCAGCCTCAACGTG...ATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp TCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCATGGGGTCCAAGTCCTTaGGCAGGAAGCGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SEPITKERVALGAALWLPWGPSP*AGSEPP
Trigger: GGGAGGCTCGCTTCCTGCCCAAGGACTTGGACCCCA...TGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTCGTCATTCCACTCAGTaGTGCTCAGCTGGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLRHSTQ*CSAGGW
Trigger: CCAACCACCAGCTGAGCACCACTGAGTGGAATGACG...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGAGGTCTGACGGTTGTTaGCCGTGGCTACCATATCTG +
Preference number: 4 (lower is better)
Translates to: GTAAPLHSCRSWTVPEDWRSDGC*PWLPYL
Trigger: CAGATATGGTAGCCACGGCCAACAACCGTCAGACCT...CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp AGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAAGCTCCCCTGGCTTCCTaGGTACTCCCAGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: RTCCTWGRALAAITCVLEAPLAS*VLPVKV
Trigger: GACCTTGACTGGGAGTACCCAGGAAGCCAGGGGAGC...TTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp TTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGACGGCAGGGCTCCCCTaGCTTCCTGGGTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: FPRIGIEPISFALAERVLTAGLP*LPGYSQ
Trigger: CTGGGAGTACCCAGGAAGCCAGGGGAGCCCTGCCGT...CAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTATAGGTCTGCCCAGCTaGAACCGCTGCACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLIGLPS*NRCTQK
Trigger: CTTCTGAGTGCAGCGGTTCCAGCTGGGCAGACCTAT...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp TCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCAAGGGGGTATCGGCCCTaGTTGCAGGAGAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SEPITKERVALGAALWLPRGYRP*LQEKPA
Trigger: TGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCT...TGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp CACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCACCGTTCCCGAGGATTaGGATAGAGCCCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: HRKACRSQIAAPRENPGGTVPED*DRAHQL
Trigger: AAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT...GCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCACTGCCCACTGGCATATaGACTCATGGGGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEALPTGI*THGARP
Trigger: AGGTCTTGCCCCATGAGTCCATATGCCAGTGGGCAG...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp ATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCCTTCTGGAGACAGCCTTaGGCTGGGAGCCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: IEPISFALAERVLSRAGAFWRQP*AGSLDA
Trigger: AGCATCCAGGCTCCCAGCCCAAGGCTGTCTCCAGAA...GGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR CAA 72 bp ATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTaGTCCAGGGCTGGGGCCATGCTCAGGTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: IEPISFALAERV*SRAGAMLRFRG
Trigger: CCCTCTGAACCTGAGCATGGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp ACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTAAGGCGTTCCTTCCCTaGGGTCTGGGCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVPEDWDRAHQLCPGRTCKAFLP*GLGFLL
Trigger: CAGCAGGAAGCCCAGACCTCAGGGAAGGAACGCCTT...ACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp TTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTGGTTGCAGGAGAAGCTCTGGGGTGCCTaGAGGCAAGTATGGAAGACC +
Preference number: 4 (lower is better)
Translates to: FSSCRSVWMRGYRPWLQEKLWGA*RQVWKT
Trigger: GGTCTTCCATACTTGCCTTCAGGCACCCCAGAGCTT...CTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR GCA 90 bp CCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGACCATGAAACCTaGCCAGGCCACAGACCGCAC +
Preference number: 4 (lower is better)
Translates to: PEDWDRAHQLCPGRTCLVQDHET*PGHRPH
Trigger: GTGCGGTCTGTGGCCTGGGCAGGTTTCATGGTCCTG...GACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTGTAGCAGACCAGTTTTaGAGCAGAGCCCCATGGGAT +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLVADQF*SRAPWD
Trigger: ATCCCATGGGGCTCTGCTGCAAAACTGGTCTGCTAC...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCACATTCCACTCAGTGGTaGTCAGCTGGTGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEAHSTQW*SAGGWS
Trigger: TGACCAACCACCAGCTGAGCACCACTGAGTGGAATG...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTTTCTGCAGCCACTGTTaGACAGCAGCATCCACGTTG +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLFCSHC*TAASTL
Trigger: CAACGTGGATGCTGCTGTGCAACAGTGGCTGCAGAA...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp ACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATTTCTGCAGCCACTGTTaGACAGCAGCATCCACGTTG +
Preference number: 4 (lower is better)
Translates to: TAAPLHSCRSWTVPEDWDFCSHC*TAASTL
Trigger: CAACGTGGATGCTGCTGTGCAACAGTGGCTGCAGAA...ATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp AGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACTGGGGTCCAAGTCCTTaGGCAGGAAGCGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SMEDLQLKHSATGNTWPHWGPSP*AGSEPP
Trigger: GGGAGGCTCGCTTCCTGCCCAAGGACTTGGACCCCA...GTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAAGGTCTGACGGTTGTTaGCCGTGGCTACCATATCTG +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEARSDGC*PWLPYL
Trigger: CAGATATGGTAGCCACGGCCAACAACCGTCAGACCT...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCGAGTGCCAGACCCTGTaGCTGGGGCCCCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGECQTL*LGPPLW
Trigger: CCAGAGTGGGGGCCCCAGCCACAGGGTCTGGCACTC...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp TCCAGCAGCCTCAGGCCTGTGAGTGGCTGTAGATTCTGGAGACAGCCTTGGGCTCCTGGATTCTCTGTTTaGTGGCCCCCTTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSSLRPVSGCRFWRQPWAPGFSV*WPPSRS
Trigger: GCTCCTGGAAGGGGGCCACCAAACAGAGAATCCAGG...AGCCCAAGGCTGTCTCCAGAATCTACAGCCACTCACAGGCCTGAGGCTGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR CCA 90 bp AGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACATGTGACATCCTGCCGTAGCGTCTaGATGAGGGGGTATCGGCCC +
Preference number: 4 (lower is better)
Translates to: RPTAEAQCHRQHLASHVTSCRSV*MRGYRP
Trigger: GGGCCGATACCCCCTCATCCAGACGCTACGGCAGGA...TGTCACATGTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGGGCTGACCTGGTTTTaGAACTTCAAGCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEAGLTWF*NFKLWG
Trigger: ACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCC...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CCAGGCCTGTCGGGCAGCTTTGCTGGAACAGCCGCCCCGCTGCACAGCTGTAGATTCAGAGGGCTGACCTaGTTTTGGAACTTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PGLSGSFAGTAAPLHSCRFRGLT*FWNFKL
Trigger: GAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAA...TCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTCCATCAGCTTTGCCCTaGCAGAACGTGTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLPSALP*QNVSCP
Trigger: TGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGG...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp ATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCCCACAGCTGTAGAAGCTaGACCGTTCCCGAGGATTGG +
Preference number: 4 (lower is better)
Translates to: IEPISFALAERVLSRAGAHSCRS*TVPEDW
Trigger: CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTG...GGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp CACCTGGCTCTGACCTGCGGATGTTTTGGAGTCAACAGTGTGCTTAGAGAGCCTGTCGGGCAGCTTTGCTaGAACAGCCGCCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: HLALTCGCFGVNSVLREPVGQLC*NSRPAA
Trigger: TGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGAC...AGGCTCTCTAAGCACACTGTTGACTCCAAAACATCCGCAGGTCAGAGCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp CTGGCTGCCATCACCTGTGTACTGGAAACTGCCCACTGGCATATGGACTCATGGACCTGCCACAGGGCCTaGCACATCCTGCACGGACCA +
Preference number: 4 (lower is better)
Translates to: LAAITCVLETAHWHMDSWTCHRA*HILHGP
Trigger: TGGTCCGTGCAGGATGTGCCAGGCCCTGTGGCAGGT...CCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp TCCAGCAGCCTCAGGCCTGTGAGTGGCTGTAGATTCTGGAGACAGCCTTGGGCTGAGTTGACAAAGGTCTaGCGGTTGTTGGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSSLRPVSGCRFWRQPWAELTKV*RLLAVA
Trigger: AGCCACGGCCAACAACCGTCAGACCTTTGTCAACTC...AGCCCAAGGCTGTCTCCAGAATCTACAGCCACTCACAGGCCTGAGGCTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR TCA 90 bp CAGCATTTGCAGGAGTTGCTGAACACCAGGCCTGTCGGGCAGCTTTGCTGGAACCCTGTACCAGGGTTGTaGAGCGCTCCTTGTCTACGG +
Preference number: 4 (lower is better)
Translates to: QHLQELLNTRPVGQLCWNPVPGL*SAPCLR
Trigger: CCGTAGACAAGGAGCGCTTCACAACCCTGGTACAGG...GTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR TCA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTAAGGCGTTCCTTCCCTaGGGTCTGGGCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPKAFLP*GLGFLL
Trigger: CAGCAGGAAGCCCAGACCTCAGGGAAGGAACGCCTT...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp CTGGCTGCCATCACCTGTGTACTGGAAACTGCCCACTGGCATATGGACTCATGGAGGCAGGCTGTAGAGTaGTCCTGGGCCCAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: LAAITCVLETAHWHMDSWRQAVE*SWAQPQ
Trigger: TTGAGGCTGGGCCCAGGATCACTCTACAGCCTGCCT...CCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp TCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCACCCAGCTGGAACCGCTaGACTCAGAAGAAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: SEPITKERVALGAALWLPPSWNR*TQKKAF
Trigger: GAACGCCTTCTTCTGAGTGCAGCGGTTCCAGCTGGG...TGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp CCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCTGCCAAGGATCAGCTTaGTGGCAGGGGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PEDWDRAHQLCPGRTCLVCQGSA*WQGSPS
Trigger: AGAAGGGGACCCCTGCCAGCAAGCTGATCCTTGGCA...GACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp AGCTTTGCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCCTTCAAGCTCTGGGGTaGCTGAAGGCAAGTATGGAA +
Preference number: 4 (lower is better)
Translates to: SFAGTAAPLHSCRSWTVPLQALG*LKASME
Trigger: TTCCATACTTGCCTTCAGGCACCCCAGAGCTTGAAG...GGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR GCA 90 bp AGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACGACCACAGAAAGGCCTaGAGGAGCCAGATTGCGGCC +
Preference number: 4 (lower is better)
Translates to: SMEDLQLKHSATGNTWPHDHRKA*RSQIAA
Trigger: GGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTGGTC...GTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR GCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCGGGCCTGGCACATCCTaGACGGACCACCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGGPGTS*TDHLPT
Trigger: GGTGGGAAGGTGGTCCGTGCAGGATGTGCCAGGCCC...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp CCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCGTGGTGCTCAGCTGGTaGTTGGTCATGCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: PEDWDRAHQLCPGRTCLVVVLSW*LVMPAK
Trigger: CTTCGCTGGCATGACCAACCACCAGCTGAGCACCAC...GACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp AGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAACGTCATTCCACTCAGTaGTGCTCAGCTGGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: RTCCTWGRALAAITCVLERHSTQ*CSAGGW
Trigger: CCAACCACCAGCTGAGCACCACTGAGTGGAATGACG...TTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp TTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTGGTTGCAGGAGAGGTCTGACGGTTGTTaGCCGTGGCTACCATATCTG +
Preference number: 4 (lower is better)
Translates to: FSSCRSVWMRGYRPWLQERSDGC*PWLPYL
Trigger: CAGATATGGTAGCCACGGCCAACAACCGTCAGACCT...CTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR CCA 90 bp CACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCACAAAATCCAGGTTCTaGGCGATTTTGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: HRKACRSQIAAPRENPGGTKSRF*AILSTS
Trigger: CGAGGTGGACAAAATCGCCCAGAACCTGGATTTTGT...GCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GCTGGACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAAGGATTCTCTGTTTGGTaGCCCCCTTCCAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: AGPFPRIGIEPISFALAEGFSVW*PPSRSR
Trigger: TCTGCTCCTGGAAGGGGGCCACCAAACAGAGAATCC...TTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp ACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATATAGCTGACCTCTTCTaGACAGGGCCCTTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TAAPLHSCRSWTVPEDWDIADLF*TGPFLL
Trigger: GAGCAAAAAGGGCCCTGTCCAGAAGAGGTCAGCTAT...ATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR CAA 72 bp GGAGGGGCTTTAGCGACTCAATTCCAGGTGCAGCATTaGCAGGAGTTGCTGAACACCAGGCCTGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGALATQFQVQH*QELLNTRPVGQ
Trigger: CTGCCCGACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAAAGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
3UTR CAA 72 bp TGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTGGTaGCAGGAGAAGCCGGCAAAGTCATCTAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: CRSVWMRGYRPW*QEKPAKSSKSS
Trigger: ACTGGACTTAGATGACTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR TCA 90 bp AGGGGCTTTAGCGACTCAATTCCAGGTGCAGCATTTGCAGGAGTTGCTGAACACTCCCTCCTTCCTTGGTaGAGGGGCCTGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RGFSDSIPGAAFAGVAEHSLLPW*RGLECQ
Trigger: CTGGCACTCCAGGCCCCTTCACCAAGGAAGGAGGGA...GTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAAAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR TCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTGATTTATTTTGCAAGTaGAAGGGGCAGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLDLFCK*KGQPRR
Trigger: TCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATC...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp GAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCCATGGATTTATTTTGCAAGTaGAAGGGGCAGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: EPISFALAERVLSRAGAMDLFCK*KGQPRR
Trigger: TCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATC...CATGGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR TCA 90 bp TCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCAGGAATAACACGTGCGTaGAGGTCCGCAGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SEPITKERVALGAALWLPGITRA*RSAEAP
Trigger: AGGAGCTTCTGCGGACCTTCACGCACGTGTTATTCC...TGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp ATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCCACCTGGCCTCACATGTaGCAGGCAGTTAAGGCTTTA +
Preference number: 4 (lower is better)
Translates to: IEPISFALAERVLSRAGATWPHM*QAVKAL
Trigger: TAAAGCCTTAACTGCCTGTCACATGTGAGGCCAGGT...GGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp TTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGCCCAGCTGGAACCGCTaGACTCAGAAGAAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: FPRIGIEPISFALAERVLPSWNR*TQKKAF
Trigger: GAACGCCTTCTTCTGAGTGCAGCGGTTCCAGCTGGG...CAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp TTAAGGCTTTACCCATTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGGCAGGGGTCCCCTTCTaGAGCCACTGTTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LRLYPFSSCRSVWMRGYRAGVPF*SHCCTA
Trigger: TGCTGTGCAACAGTGGCTGCAGAAGGGGACCCCTGC...CCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAATGGGTAAAGCCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR GCA 90 bp CCGTGTGCATGCTCTCTGGCCCATTTCAGGCCTTGGTTCTGGACTCAGAATTGGGGTATCGGCCCTGGTTaGAGGAGAAGCCGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PCACSLAHFRPWFWTQNWGIGPG*RRSRQS
Trigger: ACTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACC...CCAATTCTGAGTCCAGAACCAAGGCCTGAAATGGGCCAGAGAGCATGCACACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp AGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACATGTGACAGGTATCGGCCCTGGTTaGAGGAGAAGCCGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: RPTAEAQCHRQHLASHVTGIGPG*RRSRQS
Trigger: ACTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACC...TGTCACATGTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp TGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAAACTGCCCGACTCAATTCCAGGTaGAGCATTTGCAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: CCTWGRALAAITCVLETARLNSR*SICRSC
Trigger: GCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCG...GGCAGTTTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCTGGGGTCCAAGTCCTTaGGCAGGAAGCGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGWGPSP*AGSEPP
Trigger: GGGAGGCTCGCTTCCTGCCCAAGGACTTGGACCCCA...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTTGCTCAGCTGGTGGTTaGTCATGCCAGCGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPCSAGG*SCQRRR
Trigger: ACGCCTTCGCTGGCATGACCAACCACCAGCTGAGCA...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp CTGGCTGCCATCACCTGTGTACTGGAAACTGCCCACTGGCATATGGACTCATGGGTGGTGCTCAGCTGGTaGTTGGTCATGCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: LAAITCVLETAHWHMDSWVVLSW*LVMPAK
Trigger: CTTCGCTGGCATGACCAACCACCAGCTGAGCACCAC...CCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTGTGGTGCTCAGCTGGTaGTTGGTCATGCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPVVLSW*LVMPAK
Trigger: CTTCGCTGGCATGACCAACCACCAGCTGAGCACCAC...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp TTAAGGCTTTACCCATTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGGCTCCCCTGGCTTCCTaGGTACTCCCAGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LRLYPFSSCRSVWMRGYRAPLAS*VLPVKV
Trigger: GACCTTGACTGGGAGTACCCAGGAAGCCAGGGGAGC...CCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAATGGGTAAAGCCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR CCA 90 bp TTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGCCTGCTGGAAGGCATTaGCCAAGTCCTGTACCAGGG +
Preference number: 4 (lower is better)
Translates to: FPRIGIEPISFALAERVLPAGRH*PSPVPG
Trigger: CCCTGGTACAGGACTTGGCCAATGCCTTCCAGCAGG...CAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTACAAAATCCAGGTTCTaGGCGATTTTGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: AGCRVILGPASKLGLEGLTKSRF*AILSTS
Trigger: CGAGGTGGACAAAATCGCCCAGAACCTGGATTTTGT...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCCATGACAAAATCCAGGTTCTaGGCGATTTTGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: EPISFALAERVLSRAGAMTKSRF*AILSTS
Trigger: CGAGGTGGACAAAATCGCCCAGAACCTGGATTTTGT...CATGGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCCTGGGGCCCCCACTCTaGTGTCTGATGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGLGPPL*CLMRRP
Trigger: TGGCCTCCTCATCAGACACCAGAGTGGGGGCCCCAG...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CTTAGAGAGCCTCTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGGCCAGACCCTGTGGCTaGGGCCCCCACTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LREPLKSPHLWEEGHKPKARPCG*GPHSGV
Trigger: GACACCAGAGTGGGGGCCCCAGCCACAGGGTCTGGC...CTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAGGCTCTCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp AGGGGCTTTAGCGACTCAATTCCAGGTGCAGCATTTGCAGGAGTTGCTGAACACCTTGGTGAAGGGGCCTaGAGTGCCAGACCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RGFSDSIPGAAFAGVAEHLGEGA*SARPCG
Trigger: GCCACAGGGTCTGGCACTCCAGGCCCCTTCACCAAG...GTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAAAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CCA 90 bp CTGGCTGCCATCACCTGTGTACTGGAAACTGCCCACTGGCATATGGACTCATGGCCTGGATTCTCTGTTTaGTGGCCCCCTTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LAAITCVLETAHWHMDSWPGFSV*WPPSRS
Trigger: GCTCCTGGAAGGGGGCCACCAAACAGAGAATCCAGG...CCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCAGGGGGTATCGGCCCTaGTTGCAGGAGAAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGRGYRP*LQEKPA
Trigger: TGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCT...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCATTCAGAGGGCTGACCTaGTTTTGGAACTTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: TERPAGARLRPPGKTQEAFRGLT*FWNFKL
Trigger: GAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAA...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GAAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCCAGCCTCAAAGCTaGGACTGGAGGGGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: EGKYGRPTAEAQCHRQHLAQPQS*DWRGFS
Trigger: GCTAAAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGC...CAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CCA 90 bp CAGGTTCAGAGGGCTGACCTGGTTTTGGAACTTCAAGCTCTGGGGTGCCTGAAGCTTGGGCTGGGAGCCTaGATGCTGAGTCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: QVQRADLVLELQALGCLKLGLGA*MLSPHA
Trigger: AGCATGAGGACTCAGCATCCAGGCTCCCAGCCCAAG...CTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503786.1
3UTR CAA 72 bp TGGGGCCATGCTCAGGTTCAGAGGGCTGACCTGGTTTaGGAACTTCAAGCTCTGGGGTGCCTGAAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: WGHAQVQRADLV*ELQALGCLKAS
Trigger: ACTTGCCTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTGAGCATGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp CTGGCTGCCATCACCTGTGTACTGGAAACTGCCCACTGGCATATGGACTCATGGGAGTTGACAAAGGTCTaGCGGTTGTTGGCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LAAITCVLETAHWHMDSWELTKV*RLLAVA
Trigger: AGCCACGGCCAACAACCGTCAGACCTTTGTCAACTC...CCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp GAAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGCCTGTACCAGGGTTGTaGAGCGCTCCTTGTCTACGG +
Preference number: 4 (lower is better)
Translates to: EGKYGRPTAEAQCHRQHLPVPGL*SAPCLR
Trigger: CCGTAGACAAGGAGCGCTTCACAACCCTGGTACAGG...CAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp AGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACGGCTGTTATGTCCCGTaGCCTTCTCCCAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: SMEDLQLKHSATGNTWPHGCYVP*PSPKSH
Trigger: ATGGCTCTTGGGAGAAGGTCACGGGACATAACAGCC...GTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp TGCATGCTCTCTGGCCCATTTCAGGCCTTGGTTCTGGACTCAGAATTGGTTAGATCCCTCCTTCCTTGGTaGAGGGGCCTGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CMLSGPFQALVLDSELVRSLLPW*RGLECQ
Trigger: CTGGCACTCCAGGCCCCTTCACCAAGGAAGGAGGGA...TCTAACCAATTCTGAGTCCAGAACCAAGGCCTGAAATGGGCCAGAGAGCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCAGGCAGGCTGTAGAGTaGTCCTGGGCCCAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGRQAVE*SWAQPQ
Trigger: TTGAGGCTGGGCCCAGGATCACTCTACAGCCTGCCT...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp ACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATATATCTGTGAACTTCTaGGTGCCGAAATTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TAAPLHSCRSWTVPEDWDISVNF*VPKFQP
Trigger: AGGCTGGAATTTCGGCACTCAGAAGTTCACAGATAT...ATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp AAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGGCAGCCTCAGGCCTGTaGGTGGCTGTAGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: KASMEDLQLKHSATGNTWAASGL*VAVDSG
Trigger: TCCAGAATCTACAGCCACTCACAGGCCTGAGGCTGC...CCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR GCA 90 bp TCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCACATTCCACTCAGTGGTaGTCAGCTGGTGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SEPITKERVALGAALWLPHSTQW*SAGGWS
Trigger: TGACCAACCACCAGCTGAGCACCACTGAGTGGAATG...TGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp CCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCATTCCACTCAGTGGTaGTCAGCTGGTGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PEDWDRAHQLCPGRTCLVHSTQW*SAGGWS
Trigger: TGACCAACCACCAGCTGAGCACCACTGAGTGGAATG...GACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp ACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTTTCTGCAGCCACTGTTaGACAGCAGCATCCACGTTG +
Preference number: 4 (lower is better)
Translates to: TVPEDWDRAHQLCPGRTCFCSHC*TAASTL
Trigger: CAACGTGGATGCTGCTGTGCAACAGTGGCTGCAGAA...ACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp CCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCAGAGCCCATCAGCTTTaGCCTGGCAGAACGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PEDWDRAHQLCPGRTCLVRAHQL*PGRTCL
Trigger: AAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCT...GACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp ATTCCAGGTGCAGCATTTGCAGGAGTTGCTGAACACCAGGCCTGTCGGGCAGCTTACCCATTCAGTTCCTaGCGTAGCGTCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: IPGAAFAGVAEHQACRAAYPFSS*RSVWMR
Trigger: CCTCATCCAGACGCTACGGCAGGAACTGAATGGGTA...AGCTGCCCGACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR GCA 90 bp TTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTGGTTGCAGGAGGATGCTGAGTCCTCATaGTGCTTGGACATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: FSSCRSVWMRGYRPWLQEDAESS*CLDISH
Trigger: ATGACTGATGTCCAAGCAGCATGAGGACTCAGCATC...CTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR CCA 90 bp AGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACCGTCATTCCACTCAGTaGTGCTCAGCTGGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SMEDLQLKHSATGNTWPHRHSTQ*CSAGGW
Trigger: CCAACCACCAGCTGAGCACCACTGAGTGGAATGACG...GTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCGTCATTCCACTCAGTaGTGCTCAGCTGGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPRHSTQ*CSAGGW
Trigger: CCAACCACCAGCTGAGCACCACTGAGTGGAATGACG...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCGCTCCCCTGGCTTCCTaGGTACTCCCAGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGAPLAS*VLPVKV
Trigger: GACCTTGACTGGGAGTACCCAGGAAGCCAGGGGAGC...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp TGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGGTCTGGGCTTCCTGCTaGAAGGCATTGGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: CFQASEPITKERVALGAAVWASC*KALAKS
Trigger: GGACTTGGCCAATGCCTTCCAGCAGGAAGCCCAGAC...CGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp AAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACAAGGATCAGCTTGCTaGCAGGGGTCCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: KYGRPTAEAQCHRQHLASQGSAC*QGSPSA
Trigger: TGCAGAAGGGGACCCCTGCCAGCAAGCTGATCCTTG...TGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp CGCAGAAGCTCCTGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCACTGGGGCCCCCACTCTaGTGTCTGATGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RRSSCFQASEPITKERVALGPPL*CLMRRP
Trigger: TGGCCTCCTCATCAGACACCAGAGTGGGGGCCCCAG...TGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACAGGAGCTTCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGCTTGGTGAAGGGGCCTaGAGTGCCAGACCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GTNQRFILQVKGAAQETQLGEGA*SARPCG
Trigger: GCCACAGGGTCTGGCACTCCAGGCCCCTTCACCAAG...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp TGCATGCTCTCTGGCCCATTTCAGGCCTTGGTTCTGGACTCAGAATTGGTTAGACTTGGTGAAGGGGCCTaGAGTGCCAGACCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CMLSGPFQALVLDSELVRLGEGA*SARPCG
Trigger: GCCACAGGGTCTGGCACTCCAGGCCCCTTCACCAAG...TCTAACCAATTCTGAGTCCAGAACCAAGGCCTGAAATGGGCCAGAGAGCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp TTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGCACAGCTGTAGAAGCTaGACCGTTCCCGAGGATTGG +
Preference number: 4 (lower is better)
Translates to: FPRIGIEPISFALAERVLHSCRS*TVPEDW
Trigger: CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTG...CAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp CCGTGTGCATGCTCTCTGGCCCATTTCAGGCCTTGGTTCTGGACTCAGAATTGGTGGCATATGGACTCATaGGGCAAGACCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: PCACSLAHFRPWFWTQNWWHMDS*GKTCHR
Trigger: CCTGTGGCAGGTCTTGCCCCATGAGTCCATATGCCA...CCAATTCTGAGTCCAGAACCAAGGCCTGAAATGGGCCAGAGAGCATGCACACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp AGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAACCATCACCTGTGTACTaGAAACTGCCCACTGGCATA +
Preference number: 4 (lower is better)
Translates to: RTCCTWGRALAAITCVLEPSPVY*KLPTGI
Trigger: TATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGG...TTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
3UTR CAA 72 bp TTAGCGACTCAATTCCAGGTGCAGCATTTGCAGGAGTaGCTGAACACCAGGCCTGTCGGGCAGCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LATQFQVQHLQE*LNTRPVGQLCW
Trigger: CCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR TCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCTCATCAGCAGGACCATaGAACCTGCCCAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGSSAGP*NLPRPQ
Trigger: CTGTGGCCTGGGCAGGTTTCATGGTCCTGCTGATGA...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp TCCAGCAGCCTCAGGCCTGTGAGTGGCTGTAGATTCTGGAGACAGCCTTGGGCTTCTTCTTCAGGCCATTaGACTCCTGGTAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SSSLRPVSGCRFWRQPWASSSGH*TPGRES
Trigger: AGACTCTCTACCAGGAGTTCAATGGCCTGAAGAAGA...AGCCCAAGGCTGTCTCCAGAATCTACAGCCACTCACAGGCCTGAGGCTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR TCA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAGGCGTTCCTTCCCTaGGGTCTGGGCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GTNQRFILQVKGAAQETQKAFLP*GLGFLL
Trigger: CAGCAGGAAGCCCAGACCTCAGGGAAGGAACGCCTT...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp CTGGCTGCCATCACCTGTGTACTGGAAACTGCCCACTGGCATATGGACTCATGGAAGCTCTGGGGTGCCTaGAGGCAAGTATGGAAGACT +
Preference number: 4 (lower is better)
Translates to: LAAITCVLETAHWHMDSWKLWGA*RQVWKT
Trigger: AGTCTTCCATACTTGCCTTCAGGCACCCCAGAGCTT...CCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp TCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCAGGTTCAGAGGGCTaGCCTGGTTTTGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: SEPITKERVALGAALWLPSGSEG*PGFGTS
Trigger: TGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTGA...TGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp AAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGTGGAAGACCTACAGCTaGAGCACAGTGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: KASMEDLQLKHSATGNTWWKTYS*STVPQA
Trigger: TGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCA...CCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp CGCAGAAGCTCCTGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCACAGGACCATGAAACCTaGCCAGGCCACAGACCGCAC +
Preference number: 4 (lower is better)
Translates to: RRSSCFQASEPITKERVAQDHET*PGHRPH
Trigger: GTGCGGTCTGTGGCCTGGGCAGGTTTCATGGTCCTG...TGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACAGGAGCTTCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp AGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACCATTCCACTCAGTGGTaGTCAGCTGGTGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SMEDLQLKHSATGNTWPHHSTQW*SAGGWS
Trigger: TGACCAACCACCAGCTGAGCACCACTGAGTGGAATG...GTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp AAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGGTTGAGGCTGGCTGCTaGACCACTCTCTTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: KASMEDLQLKHSATGNTWVEAGC*TTLFLP
Trigger: AGGCAAGAAGAGAGTGGTGCAGCAGCCAGCCTCAAC...CCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp GAAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGTTGAGGCTGGCTGCTaGACCACTCTCTTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: EGKYGRPTAEAQCHRQHLVEAGC*TTLFLP
Trigger: AGGCAAGAAGAGAGTGGTGCAGCAGCCAGCCTCAAC...CAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp TTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGAGAGCCCATCAGCTTTaGCCTGGCAGAACGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FPRIGIEPISFALAERVLRAHQL*PGRTCL
Trigger: AAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCT...CAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp CGCAGAAGCTCCTGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCAGACCACAGAAAGGCCTaGAGGAGCCAGATTGCGGCC +
Preference number: 4 (lower is better)
Translates to: RRSSCFQASEPITKERVADHRKA*RSQIAA
Trigger: GGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTGGTC...TGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACAGGAGCTTCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp CTGGCTGCCATCACCTGTGTACTGGAAACTGCCCACTGGCATATGGACTCATGGCACCTGGCTCTGACCTaGGGATGTTTTGGAGTCAAC +
Preference number: 4 (lower is better)
Translates to: LAAITCVLETAHWHMDSWHLALT*GCFGVN
Trigger: GTTGACTCCAAAACATCCGCAGGTCAGAGCCAGGTG...CCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp CAGGTTCAGAGGGCTGACCTGGTTTTGGAACTTCAAGCTCTGGGGTGCCTGAAGTACCCATTCAGTTCCTaGCGTAGCGTCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: QVQRADLVLELQALGCLKYPFSS*RSVWMR
Trigger: CCTCATCCAGACGCTACGGCAGGAACTGAATGGGTA...CTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp AAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCAATAGGTCTGCCCAGCTaGAACCGCTGCACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: KYGRPTAEAQCHRQHLASIGLPS*NRCTQK
Trigger: CTTCTGAGTGCAGCGGTTCCAGCTGGGCAGACCTAT...TGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCCCTGGATTCTCTGTTTaGTGGCCCCCTTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGPGFSV*WPPSRS
Trigger: GCTCCTGGAAGGGGGCCACCAAACAGAGAATCCAGG...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp AGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACGGGCTGACCTGGTTTTaGAACTTCAAGCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SMEDLQLKHSATGNTWPHGLTWF*NFKLWG
Trigger: ACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCC...GTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp AGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACATGTGACACCATCAGCTTTGCCCTaGCAGAACGTGTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RPTAEAQCHRQHLASHVTPSALP*QNVSCP
Trigger: TGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGG...TGTCACATGTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp CGCAGAAGCTCCTGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCAGCCCAGCCTCAAAGCTaGGACTGGAGGGGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: RRSSCFQASEPITKERVAAQPQS*DWRGFS
Trigger: GCTAAAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGC...TGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACAGGAGCTTCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp AGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAAAAGTCACCACATCTTTaGGAAGAGGGGCACAAACCA +
Preference number: 4 (lower is better)
Translates to: RTCCTWGRALAAITCVLEKSPHL*EEGHKP
Trigger: TGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTT...TTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp TTAAGGCTTTACCCATTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGAGTGGCTGTAGATTCTaGAGACAGCCTTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRLYPFSSCRSVWMRGYRSGCRF*RQPWAG
Trigger: CCCAGCCCAAGGCTGTCTCCAGAATCTACAGCCACT...CCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAATGGGTAAAGCCTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR TCA 90 bp AATGCTGAGTGGCTGCTCGCAGAGCGCTTAAATCAGGGAAAAGTTCTTCTCTGCTCATCAGCAGGACCATaGAACCTGCCCAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: NAEWLLAERLNQGKVLLCSSAGP*NLPRPQ
Trigger: CTGTGGCCTGGGCAGGTTTCATGGTCCTGCTGATGA...GCAGAGAAGAACTTTTCCCTGATTTAAGCGCTCTGCGAGCAGCCACTCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp CAGCATTTGCAGGAGTTGCTGAACACCAGGCCTGTCGGGCAGCTTTGCTGGAACTCTTCTTCAGGCCATTaGACTCCTGGTAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: QHLQELLNTRPVGQLCWNSSSGH*TPGRES
Trigger: AGACTCTCTACCAGGAGTTCAATGGCCTGAAGAAGA...GTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR TCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCGGCTGTTATGTCCCGTaGCCTTCTCCCAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGGCYVP*PSPKSH
Trigger: ATGGCTCTTGGGAGAAGGTCACGGGACATAACAGCC...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAATCCCTCCTTCCTTGGTaGAGGGGCCTGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKSLLPW*RGLECQ
Trigger: CTGGCACTCCAGGCCCCTTCACCAAGGAAGGAGGGA...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp AGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACTCAGGTTCAGAGGGCTaGCCTGGTTTTGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: SMEDLQLKHSATGNTWPHSGSEG*PGFGTS
Trigger: TGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTGA...GTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp CTTAGAGAGCCTCTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGAACGGGGGCAGTAGGTaGGATAGGGCCTGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LREPLKSPHLWEEGHKPKNGGSR*DRACKG
Trigger: CCCTTTGCAGGCCCTATCTCACCTACTGCCCCCGTT...CTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAGGCTCTCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp AGGGGCTTTAGCGACTCAATTCCAGGTGCAGCATTTGCAGGAGTTGCTGAACACAAGCTCTGGGGTGCCTaGAGGCAAGTATGGAAGACC +
Preference number: 4 (lower is better)
Translates to: RGFSDSIPGAAFAGVAEHKLWGA*RQVWKT
Trigger: GGTCTTCCATACTTGCCTTCAGGCACCCCAGAGCTT...GTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAAAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR GCA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGGAGGTCTGGGCTTCCTaGTGGAAGGCATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GTNQRFILQVKGAAQETQEVWAS*WKALAK
Trigger: CTTGGCCAATGCCTTCCAGCAGGAAGCCCAGACCTC...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCGTTGAGGCTGGCTGCTaGACCACTCTCTTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGVEAGC*TTLFLP
Trigger: AGGCAAGAAGAGAGTGGTGCAGCAGCCAGCCTCAAC...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp CTTAGAGAGCCTCTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGGCAGGGGTCCCCTTCTaGAGCCACTGTTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LREPLKSPHLWEEGHKPKAGVPF*SHCCTA
Trigger: TGCTGTGCAACAGTGGCTGCAGAAGGGGACCCCTGC...CTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAGGCTCTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp AGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACCTTCAAGCTCTGGGGTaGCTGAAGGCAAGTATGGAA +
Preference number: 4 (lower is better)
Translates to: SMEDLQLKHSATGNTWPHLQALG*LKASME
Trigger: TTCCATACTTGCCTTCAGGCACCCCAGAGCTTGAAG...GTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp TGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGAGAGCCCATCAGCTTTaGCCTGGCAGAACGTGTCTT +
Preference number: 4 (lower is better)
Translates to: CFQASEPITKERVALGAARAHQL*PGRTCL
Trigger: AAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCT...CGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCGACTCAATTCCAGGTaGAGCATTTGCAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPRLNSR*SICRSC
Trigger: GCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCG...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR GCA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGACAGCTGAAGCACAGTaGCACAGGCAACACCTGGCC +
Preference number: 4 (lower is better)
Translates to: GTNQRFILQVKGAAQETQTAEAQ*HRQHLA
Trigger: GGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGT...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CCA 90 bp CAGCATTTGCAGGAGTTGCTGAACACCAGGCCTGTCGGGCAGCTTTGCTGGAACACAAAATCCAGGTTCTaGGCGATTTTGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: QHLQELLNTRPVGQLCWNTKSRF*AILSTS
Trigger: CGAGGTGGACAAAATCGCCCAGAACCTGGATTTTGT...GTTCCAGCAAAGCTGCCCGACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CCA 90 bp AATGCTGAGTGGCTGCTCGCAGAGCGCTTAAATCAGGGAAAAGTTCTTCTCTGCCAAGGATCAGCTTGCTaGCAGGGGTCCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: NAEWLLAERLNQGKVLLCQGSAC*QGSPSA
Trigger: TGCAGAAGGGGACCCCTGCCAGCAAGCTGATCCTTG...GCAGAGAAGAACTTTTCCCTGATTTAAGCGCTCTGCGAGCAGCCACTCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCGGATTCTCTGTTTGGTaGCCCCCTTCCAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGGFSVW*PPSRSR
Trigger: TCTGCTCCTGGAAGGGGGCCACCAAACAGAGAATCC...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGCCTGGATTCTCTGTTTaGTGGCCCCCTTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GTNQRFILQVKGAAQETQPGFSV*WPPSRS
Trigger: GCTCCTGGAAGGGGGCCACCAAACAGAGAATCCAGG...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAATCCTGCCGTAGCGTCTaGATGAGGGGGTATCGGCCC +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKSCRSV*MRGYRP
Trigger: GGGCCGATACCCCCTCATCCAGACGCTACGGCAGGA...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CACCTGGCTCTGACCTGCGGATGTTTTGGAGTCAACAGTGTGCTTAGAGAGCCTGGGCTGACCTGGTTTTaGAACTTCAAGCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HLALTCGCFGVNSVLREPGLTWF*NFKLWG
Trigger: ACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCC...AGGCTCTCTAAGCACACTGTTGACTCCAAAACATCCGCAGGTCAGAGCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp GAAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGCCATCAGCTTTGCCCTaGCAGAACGTGTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: EGKYGRPTAEAQCHRQHLPSALP*QNVSCP
Trigger: TGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGG...CAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CCA 90 bp TTAAGGCTTTACCCATTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGACCGTTCCCGAGGATTaGGATAGAGCCCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: LRLYPFSSCRSVWMRGYRTVPED*DRAHQL
Trigger: AAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT...CCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAATGGGTAAAGCCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR CCA 90 bp CTGGCTGCCATCACCTGTGTACTGGAAACTGCCCACTGGCATATGGACTCATGGAATTCCAGCCTCCGATaGCTAACAGGGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LAAITCVLETAHWHMDSWNSSLR*LTGSSA
Trigger: AGCTGAAGACCCTGTTAGCCATCGGAGGCTGGAATT...CCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp TGCATGCTCTCTGGCCCATTTCAGGCCTTGGTTCTGGACTCAGAATTGGTTAGAGGCTGTTATGTCCCGTaGCCTTCTCCCAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CMLSGPFQALVLDSELVRGCYVP*PSPKSH
Trigger: ATGGCTCTTGGGAGAAGGTCACGGGACATAACAGCC...TCTAACCAATTCTGAGTCCAGAACCAAGGCCTGAAATGGGCCAGAGAGCATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAACAGCAGCATCCACGTTaGGGCTGGCTGCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: TNQRFILQVKGAAQETQKQQHPR*GWLLHH
Trigger: GTGGTGCAGCAGCCAGCCTCAACGTGGATGCTGCTG...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp ACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTATATCTGTGAACTTCTaGGTGCCGAAATTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TVPEDWDRAHQLCPGRTCISVNF*VPKFQP
Trigger: AGGCTGGAATTTCGGCACTCAGAAGTTCACAGATAT...ACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp AAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCAACCTGGCCTCACATGTaGCAGGCAGTTAAGGCTTTA +
Preference number: 4 (lower is better)
Translates to: KYGRPTAEAQCHRQHLASTWPHM*QAVKAL
Trigger: TAAAGCCTTAACTGCCTGTCACATGTGAGGCCAGGT...TGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR GCA 90 bp CGCAGAAGCTCCTGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCAGTTGAGGCTGGCTGCTaGACCACTCTCTTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RRSSCFQASEPITKERVAVEAGC*TTLFLP
Trigger: AGGCAAGAAGAGAGTGGTGCAGCAGCCAGCCTCAAC...TGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACAGGAGCTTCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp AGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGCAGGTCTGACGGTTGTTaGCCGTGGCTACCATATCTG +
Preference number: 4 (lower is better)
Translates to: RKARLRAESLDKGRPQKGRSDGC*PWLPYL
Trigger: CAGATATGGTAGCCACGGCCAACAACCGTCAGACCT...GCCTTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CGCAGAAGCTCCTGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCAGGATTCTCTGTTTGGTaGCCCCCTTCCAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RRSSCFQASEPITKERVAGFSVW*PPSRSR
Trigger: TCTGCTCCTGGAAGGGGGCCACCAAACAGAGAATCC...TGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACAGGAGCTTCTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAATCCTGCCGTAGCGTCTaGATGAGGGGGTATCGGCCC +
Preference number: 4 (lower is better)
Translates to: TNQRFILQVKGAAQETQKSCRSV*MRGYRP
Trigger: GGGCCGATACCCCCTCATCCAGACGCTACGGCAGGA...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp AGGGGCTTTAGCGACTCAATTCCAGGTGCAGCATTTGCAGGAGTTGCTGAACACACCGTTCCCGAGGATTaGGATAGAGCCCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: RGFSDSIPGAAFAGVAEHTVPED*DRAHQL
Trigger: AAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT...GTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAAAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CCA 90 bp CGCAGAAGCTCCTGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCACCTCAAAGCTGGGACTaGAGGGGCTTTAGCGACTCA +
Preference number: 4 (lower is better)
Translates to: RRSSCFQASEPITKERVAPQSWD*RGFSDS
Trigger: TGAGTCGCTAAAGCCCCTCCAGTCCCAGCTTTGAGG...TGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACAGGAGCTTCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp CTGGCTGCCATCACCTGTGTACTGGAAACTGCCCACTGGCATATGGACTCATGGACAGGGTCTTCAGCTTaGGATTCATCTTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LAAITCVLETAHWHMDSWTGSSA*DSSSSG
Trigger: GCCTGAAGAAGATGAATCCCAAGCTGAAGACCCTGT...CCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp AAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCAAATTCCAGCCTCCGATaGCTAACAGGGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KYGRPTAEAQCHRQHLASNSSLR*LTGSSA
Trigger: AGCTGAAGACCCTGTTAGCCATCGGAGGCTGGAATT...TGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAATCATCAGCAGGACCATaGAACCTGCCCAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKSSAGP*NLPRPQ
Trigger: CTGTGGCCTGGGCAGGTTTCATGGTCCTGCTGATGA...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAACTTCCCACCTGGCTCTaGCCTGCGGATGTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKLPTWL*PADVLE
Trigger: CTCCAAAACATCCGCAGGTCAGAGCCAGGTGGGAAG...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAACAGGACCATGAAACCTaGCCAGGCCACAGACCGCAC +
Preference number: 4 (lower is better)
Translates to: TNQRFILQVKGAAQETQKQDHET*PGHRPH
Trigger: GTGCGGTCTGTGGCCTGGGCAGGTTTCATGGTCCTG...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp CAAACAGGATTTATCTCGAAGACCCCTGAGTACCAGGGGTCTGAATTCTTAGTGGAGGTCTGGGCTTCCTaGTGGAAGGCATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QTGFISKTPEYQGSEFLVEVWAS*WKALAK
Trigger: CTTGGCCAATGCCTTCCAGCAGGAAGCCCAGACCTC...CACTAAGAATTCAGACCCCTGGTACTCAGGGGTCTTCGAGATAAATCCTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGTTCTGCAGCCACTGTTaGACAGCAGCATCCACGTTG +
Preference number: 4 (lower is better)
Translates to: GTNQRFILQVKGAAQETQFCSHC*TAASTL
Trigger: CAACGTGGATGCTGCTGTGCAACAGTGGCTGCAGAA...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGTATCGGCCCTGGTTaGAGGAGAAGCCGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKGIGPG*RRSRQS
Trigger: ACTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACC...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp CTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGATTTATTTTGCACCTGTCGGGCAGCTTTaGTGGAACAGCCGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: LKSPHLWEEGHKPKIYFAPVGQL*WNSRPA
Trigger: AGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGG...TGCAAAATAAATCTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAACCAGGACACCGTGTaGATGCTCTCTGGCCCATTT +
Preference number: 4 (lower is better)
Translates to: GTNQRFILQVKGAAQETQNQDTV*MLSGPF
Trigger: AAATGGGCCAGAGAGCATGCACACGGTGTCCTGGTT...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp CAGGTTCAGAGGGCTGACCTGGTTTTGGAACTTCAAGCTCTGGGGTGCCTGAAGGCTGAGTCCTCATGCTaGTTGGACATCAGTCATTTT +
Preference number: 4 (lower is better)
Translates to: QVQRADLVLELQALGCLKAESSC*LDISHF
Trigger: AAAATGACTGATGTCCAAGCAGCATGAGGACTCAGC...CTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR CCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAACCTGCTGGAAGGCATTaGCCAAGTCCTGTACCAGGG +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKPAGRH*PSPVPG
Trigger: CCCTGGTACAGGACTTGGCCAATGCCTTCCAGCAGG...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp CACCTGGCTCTGACCTGCGGATGTTTTGGAGTCAACAGTGTGCTTAGAGAGCCTTTCAGAGGGCTGACCTaGTTTTGGAACTTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: HLALTCGCFGVNSVLREPFRGLT*FWNFKL
Trigger: GAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAA...AGGCTCTCTAAGCACACTGTTGACTCCAAAACATCCGCAGGTCAGAGCCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp CTTAGAGAGCCTCTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGCACAGCTGTAGAAGCTaGACCGTTCCCGAGGATTGG +
Preference number: 4 (lower is better)
Translates to: LREPLKSPHLWEEGHKPKHSCRS*TVPEDW
Trigger: CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTG...CTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAGGCTCTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp AAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCAACAGGGTCTTCAGCTTaGGATTCATCTTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: KYGRPTAEAQCHRQHLASTGSSA*DSSSSG
Trigger: GCCTGAAGAAGATGAATCCCAAGCTGAAGACCCTGT...TGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR TCA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGTCAGGTTCAGAGGGCTaGCCTGGTTTTGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: GTNQRFILQVKGAAQETQSGSEG*PGFGTS
Trigger: TGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTGA...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAAGAGGTCTGGGCTTCCTaGTGGAAGGCATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TNQRFILQVKGAAQETQKEVWAS*WKALAK
Trigger: CTTGGCCAATGCCTTCCAGCAGGAAGCCCAGACCTC...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAACCCAGCTGGAACCGCTaGACTCAGAAGAAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: TNQRFILQVKGAAQETQKPSWNR*TQKKAF
Trigger: GAACGCCTTCTTCTGAGTGCAGCGGTTCCAGCTGGG...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp CAAACAGGATTTATCTCGAAGACCCCTGAGTACCAGGGGTCTGAATTCTTAGTGCACGTTGAGGCTGGCTaGTGCACCACTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QTGFISKTPEYQGSEFLVHVEAG*CTTLFL
Trigger: CAAGAAGAGAGTGGTGCAGCAGCCAGCCTCAACGTG...CACTAAGAATTCAGACCCCTGGTACTCAGGGGTCTTCGAGATAAATCCTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGCTTCAAGCTCTGGGGTaGCTGAAGGCAAGTATGGAA +
Preference number: 4 (lower is better)
Translates to: GTNQRFILQVKGAAQETQLQALG*LKASME
Trigger: TTCCATACTTGCCTTCAGGCACCCCAGAGCTTGAAG...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp CTGGCTGCCATCACCTGTGTACTGGAAACTGCCCACTGGCATATGGACTCATGGAAAGTTCTTCTCTGCTaGCATCTAGTGGCATTTTGG +
Preference number: 4 (lower is better)
Translates to: LAAITCVLETAHWHMDSWKVLLC*HLVAFW
Trigger: CCAAAATGCCACTAGATGGCAGCAGAGAAGAACTTT...CCATGAGTCCATATGCCAGTGGGCAGTTTCCAGTACACAGGTGATGGCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp CTCTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGATTTATTTTGAGAACGTGTTGCACTTaGGGCCGCGCTCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLSHHIFGKRGTNQRFILRTCCT*GRALAA
Trigger: GGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCT...CAAAATAAATCTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR TCA 90 bp AATGCTGAGTGGCTGCTCGCAGAGCGCTTAAATCAGGGAAAAGTTCTTCTCTGCTCTTCTTCAGGCCATTaGACTCCTGGTAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NAEWLLAERLNQGKVLLCSSSGH*TPGRES
Trigger: AGACTCTCTACCAGGAGTTCAATGGCCTGAAGAAGA...GCAGAGAAGAACTTTTCCCTGATTTAAGCGCTCTGCGAGCAGCCACTCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAAGAGCCCATCAGCTTTaGCCTGGCAGAACGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKRAHQL*PGRTCL
Trigger: AAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCT...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAACCATCAGCTTTGCCCTaGCAGAACGTGTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKPSALP*QNVSCP
Trigger: TGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGG...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp CTCTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGATTTATTTTGTGCCAAGGATCAGCTTaGTGGCAGGGGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLSHHIFGKRGTNQRFILCQGSA*WQGSPS
Trigger: AGAAGGGGACCCCTGCCAGCAAGCTGATCCTTGGCA...CAAAATAAATCTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp CAAACAGGATTTATCTCGAAGACCCCTGAGTACCAGGGGTCTGAATTCTTAGTGTTTGGGAATAACACGTaGGTGAAGGTCCGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: QTGFISKTPEYQGSEFLVFGNNT*VKVRRS
Trigger: GCTTCTGCGGACCTTCACGCACGTGTTATTCCCAAA...CACTAAGAATTCAGACCCCTGGTACTCAGGGGTCTTCGAGATAAATCCTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAAACCGTTCCCGAGGATTaGGATAGAGCCCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: TNQRFILQVKGAAQETQKTVPED*DRAHQL
Trigger: AAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAAATTCCAGCCTCCGATaGCTAACAGGGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKNSSLR*LTGSSA
Trigger: AGCTGAAGACCCTGTTAGCCATCGGAGGCTGGAATT...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAATCTTCTTCAGGCCATTaGACTCCTGGTAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKSSSGH*TPGRES
Trigger: AGACTCTCTACCAGGAGTTCAATGGCCTGAAGAAGA...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGATTTATTTTGCAAGTaGAAGGGGCAGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKDLFCK*KGQPRR
Trigger: TCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATC...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp CTCTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGATTTATTTTGGGAAGACTCAGTTCCTaGCGTAGCGTCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LLSHHIFGKRGTNQRFILGRLSS*RSVWMR
Trigger: CCTCATCCAGACGCTACGGCAGGAACTGAGTCTTCC...CAAAATAAATCTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAACGACTCAATTCCAGGTaGAGCATTTGCAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: TNQRFILQVKGAAQETQKRLNSR*SICRSC
Trigger: GCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCG...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR GCA 90 bp CTCTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGATTTATTTTGAACCAAAGAACGTGTTaGACTTGGGGCCGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLSHHIFGKRGTNQRFILNQRTC*TWGRAL
Trigger: CAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTT...CAAAATAAATCTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAACAGGGTCTTCAGCTTaGGATTCATCTTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKTGSSA*DSSSSG
Trigger: GCCTGAAGAAGATGAATCCCAAGCTGAAGACCCTGT...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAATATCTGTGAACTTCTaGGTGCCGAAATTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKISVNF*VPKFQP
Trigger: AGGCTGGAATTTCGGCACTCAGAAGTTCACAGATAT...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367229.6
ENST00000491855.5
CDS-3UTR TCA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAACTGTTTCCAGGCTTCTaGGCCAATAACCAAAGAACG +
Preference number: 4 (lower is better)
Translates to: TNQRFILQVKGAAQETQKLFPGF*ANNQRT
Trigger: CGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACAG...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp CTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGATTTATTTTGCACTTCAAGCTCTGGGGTaGCTGAAGGCAAGTATGGAA +
Preference number: 4 (lower is better)
Translates to: LKSPHLWEEGHKPKIYFALQALG*LKASME
Trigger: TTCCATACTTGCCTTCAGGCACCCCAGAGCTTGAAG...TGCAAAATAAATCTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR GCA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAAGGAAAAGTTCTTCTCTaGTGCCATCTAGTGGCATTT +
Preference number: 4 (lower is better)
Translates to: KRKARLRAESLDKGRPQKGKVLL*CHLVAF
Trigger: AAATGCCACTAGATGGCAGCAGAGAAGAACTTTTCC...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS GCA 90 bp CAGGAGCCACTGCCTCGTGCTCAGCCCCACGGGCGCCACTCTGTGTaGCCTGCAGCGGGGAGGACCCACAGGGTAGACCGCCTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: QEPLPRAQPHGRHSV*PAAGRTHRVDRLLG
Trigger: GCCAAGGAGGCGGTCTACCCTGTGGGTCCTCCCCGCTGCAGGGCACACAGAGTGGCGCCCGTGGGGCTGAGCACGAGGCAGTGGCTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460619.1
CDS-3UTR CAA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTGCCTGTCGGGCAGCTTaGCTGGAACAGCCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: AGCRVILGPASKLGLEGLACRAA*LEQPPR
Trigger: GCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGC...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp GAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCCATGGCCTGTCGGGCAGCTTaGCTGGAACAGCCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: EPISFALAERVLSRAGAMACRAA*LEQPPR
Trigger: GCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGC...CATGGCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CAA 90 bp TGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAAACTGCCGCCTGTCGGGCAGCTTaGCTGGAACAGCCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: CCTWGRALAAITCVLETAACRAA*LEQPPR
Trigger: GCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGC...GGCAGTTTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGCCTGCAGGAGCCAGATaGCGGCCCCCAGGGAAAACC +
Preference number: 5 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQPAGAR*RPPGKT
Trigger: GGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGG...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS GCA 90 bp TGTGTGGACGGGCGTGCATGTGACCGCGTCTGTGCACCGGGGCTGTaGTGTGGGCTTTGTGCTGAGCCAAAGGTGGGGCTTCTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: CVDGRACDRVCAPGL*CGLCAEPKVGLLLS
Trigger: GGACAGGAGAAGCCCCACCTTTGGCTCAGCACAAAGCCCACAGCACAGCCCCGGTGCACAGACGCGGTCACATGCACGCCCGTCCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460619.1
CDS-3UTR CAA 90 bp CACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCGTTGTGAAGCGCTCCTaGTCTACGGCAGGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: HRKACRSQIAAPRENPGGVVKRS*STAGLP
Trigger: GGGGAGCCCTGCCGTAGACAAGGAGCGCTTCACAAC...GCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGGTTGTGAAGCGCTCCTaGTCTACGGCAGGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQVVKRS*STAGLP
Trigger: GGGGAGCCCTGCCGTAGACAAGGAGCGCTTCACAAC...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp GGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGTTGTGAAGCGCTCCTaGTCTACGGCAGGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: GTAAPLHSCRSWTVPEDWVVKRS*STAGLP
Trigger: GGGGAGCCCTGCCGTAGACAAGGAGCGCTTCACAAC...CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp CCAGGCCTGTCGGGCAGCTTTGCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAATGCCAAGGATCAGCTaGCTGGCAGGGGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: PGLSGSFAGTAAPLHSCRMPRIS*LAGVPF
Trigger: GAAGGGGACCCCTGCCAGCAAGCTGATCCTTGGCAT...TCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGCTGCCCGACAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CAA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGACAGCAGCATCCACGTaGAGGCTGGCTGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQTAAST*RLAAAP
Trigger: TGGTGCAGCAGCCAGCCTCAACGTGGATGCTGCTGT...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp GCTTTGCTGGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGACAGCAGCATCCACGTaGAGGCTGGCTGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: ALLEQPPRCTAVEAGPFPTAAST*RLAAAP
Trigger: TGGTGCAGCAGCCAGCCTCAACGTGGATGCTGCTGT...CGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCCAGCAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS TCA 90 bp AGCACAGGGGAAGGATGGCATAGGAGACTCCCACCAAGAAGGCAGTaGTCCTGGGCTTGGGCGCCCACTCCCTGCCAGAGAACCCAGCCT +
Preference number: 5 (lower is better)
Translates to: STGEGWHRRLPPRRQ*SWAWAPTPCQRTQP
Trigger: AGGCTGGGTTCTCTGGCAGGGAGTGGGCGCCCAAGCCCAGGATCACTGCCTTCTTGGTGGGAGTCTCCTATGCCATCCTTCCCCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS-3UTR CAA 90 bp ACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATAGCATCCCTCCTTCCTaGGTGAAGGGGCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: TAAPLHSCRSWTVPEDWDSIPPS*VKGPGV
Trigger: CACTCCAGGCCCCTTCACCAAGGAAGGAGGGATGCT...ATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTTCCTGGATTCTCTGTTaGGTGGCCCCCTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: AGCRVILGPASKLGLEGLSWILC*VAPFQE
Trigger: CTCCTGGAAGGGGGCCACCAAACAGAGAATCCAGGA...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp ACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGATTCCTGGATTCTCTGTTaGGTGGCCCCCTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: TAAPLHSCRSWTVPEDWDSWILC*VAPFQE
Trigger: CTCCTGGAAGGGGGCCACCAAACAGAGAATCCAGGA...ATCCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp GCTGGACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAAGGGTATCGGCCCTGGTaGCAGGAGAAGCCGGCAAAG +
Preference number: 5 (lower is better)
Translates to: AGPFPRIGIEPISFALAEGYRPW*QEKPAK
Trigger: CTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACCC...TTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp GGAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGAGGGCTGACCTGGTTTaGGAACTTCAAGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: GTAAPLHSCRSWTVPEDWRADLV*ELQALG
Trigger: CCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCT...CCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS TCA 90 bp CTGCCCAGCTGGAACCGCTGCACTCAGAAGAAGGCGTTCCTTCCCTaGGGTCTGGGCTTCCTGCTGGAAGGCATTGGCCAAGTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: LPSWNRCTQKKAFLP*GLGFLLEGIGQVLY
Trigger: GTACAGGACTTGGCCAATGCCTTCCAGCAGGAAGCCCAGACCTCAGGGAAGGAACGCCTTCTTCTGAGTGCAGCGGTTCCAGCTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
ENST00000503786.1
CDS TCA 90 bp CTGGCCTGGCTTCAGGAGCCCTCTAACCTTCACCCTCAGGCCACTTaGCCTCCACCTAAATCCAGCACTGCTCCCTGTAGGAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LAWLQEPSNLHPQAT*PPPKSSTAPCRKAG
Trigger: CCCTGCCTTCCTACAGGGAGCAGTGCTGGATTTAGGTGGAGGTCAAGTGGCCTGAGGGTGAAGGTTAGAGGGCTCCTGAAGCCAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp GCACTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTaGTTGCAGGAGAAGCCGGCAAAGTCATCTAAGTCCAGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: ALSSCRSVWMRGYRP*LQEKPAKSSKSSAQ
Trigger: CTGGGCACTGGACTTAGATGACTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479483.1
ENST00000484834.5
CDS-3UTR CAA 90 bp CAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAGCCGTCAAAGCTGTATTaGCGCAGAAACCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: QKGLQEPDCGPQGKPRRQPSKLY*RRNLMA
Trigger: GGCCATCAGGTTTCTGCGCAAATACAGCTTTGACGG...CTGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp GAACAGCCGCCCCGCTGCACAGCTGTAGAAGCTGGACCGTTCCCGAGGATTGGGCCGTCAAAGCTGTATTaGCGCAGAAACCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: EQPPRCTAVEAGPFPRIGPSKLY*RRNLMA
Trigger: GGCCATCAGGTTTCTGCGCAAATACAGCTTTGACGG...CCCAATCCTCGGGAACGGTCCAGCTTCTACAGCTGTGCAGCGGGGCGGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp TCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCAGTTGTGAAGCGCTCCTaGTCTACGGCAGGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: SEPITKERVALGAALWLPVVKRS*STAGLP
Trigger: GGGGAGCCCTGCCGTAGACAAGGAGCGCTTCACAAC...TGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp GATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCCAGGGCTGGGGCTCCTGCTGGAAGGCATaGGCCAAGTCCTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: DRAHQLCPGRTCLVQGWGSCWKA*AKSCTR
Trigger: CCTGGTACAGGACTTGGCCAATGCCTTCCAGCAGGA...GCCCCAGCCCTGGACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCACTTCTGCAGCCACTGTaGCACAGCAGCATCCACGTT +
Preference number: 5 (lower is better)
Translates to: TERPAGARLRPPGKTQEALLQPL*HSSIHV
Trigger: AACGTGGATGCTGCTGTGCAACAGTGGCTGCAGAAG...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp GCTGGACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAAATGCCAAGGATCAGCTaGCTGGCAGGGGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: AGPFPRIGIEPISFALAEMPRIS*LAGVPF
Trigger: GAAGGGGACCCCTGCCAGCAAGCTGATCCTTGGCAT...TTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp TGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCACCTGTGTACTGGAAACTGCCTCCTGGATTCTCTGTTaGGTGGCCCCCTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: CCTWGRALAAITCVLETASWILC*VAPFQE
Trigger: CTCCTGGAAGGGGGCCACCAAACAGAGAATCCAGGA...GGCAGTTTCCAGTACACAGGTGATGGCAGCCAGAGCGCGGCCCCAAGTGCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp ACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTGGGTATCGGCCCTGGTaGCAGGAGAAGCCGGCAAAG +
Preference number: 5 (lower is better)
Translates to: TVPEDWDRAHQLCPGRTCGYRPW*QEKPAK
Trigger: CTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACCC...ACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp ACAGAAAGGCCTGCAGGAGCCAGATTGCGGCCCCCAGGGAAAACCCAGGAGGCAAGGGCTGACCTGGTTTaGGAACTTCAAGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: TERPAGARLRPPGKTQEARADLV*ELQALG
Trigger: CCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCT...TGCCTCCTGGGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGGCCTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTCAGCATTTGCAGGAGTaGCTGAACACCAGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: AGCRVILGPASKLGLEGLQHLQE*LNTRPV
Trigger: GACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTG...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS GCA 90 bp GCTGCACTCAGAAGAAGGCGTTCCTTCCCTGAGGTCTGGGCTTCCTaGTGGAAGGCATTGGCCAAGTCCTGTACCAGGGTTGTGAAGCGC +
Preference number: 5 (lower is better)
Translates to: AALRRRRSFPEVWAS*WKALAKSCTRVVKR
Trigger: GCGCTTCACAACCCTGGTACAGGACTTGGCCAATGCCTTCCAGCAGGAAGCCCAGACCTCAGGGAAGGAACGCCTTCTTCTGAGTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
ENST00000503786.1
CDS CCA 90 bp AGACTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTaGTTGCAGGAGAAGCCGGCAAAGTCATCTAAGTCCAGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: RLSSCRSVWMRGYRP*LQEKPAKSSKSSAQ
Trigger: CTGGGCACTGGACTTAGATGACTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255427.7
ENST00000367229.6
CDS-3UTR CAA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTAGGTTCTGGGCGATTTaGTCCACCTCGTATCCAGCA +
Preference number: 5 (lower is better)
Translates to: AGCRVILGPASKLGLEGLRFWAI*STSYPA
Trigger: TGCTGGATACGAGGTGGACAAAATCGCCCAGAACCT...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp CCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCACAGCAGCATCCACGTaGAGGCTGGCTGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: PEDWDRAHQLCPGRTCLVTAAST*RLAAAP
Trigger: TGGTGCAGCAGCCAGCCTCAACGTGGATGCTGCTGT...GACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp CACCTGGCTCTGACCTGCGGATGTTTTGGAGTCAACAGTGTGCTTAGAGAGCCTCCTGCAGGAGCCAGATaGCGGCCCCCAGGGAAAACC +
Preference number: 5 (lower is better)
Translates to: HLALTCGCFGVNSVLREPPAGAR*RPPGKT
Trigger: GGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGG...AGGCTCTCTAAGCACACTGTTGACTCCAAAACATCCGCAGGTCAGAGCCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS TCA 90 bp TTGAGGGCCAGGCCAGAGAAGTTTAGAAAGAGTCCCAGGACTACCTaGGCACTGCCTTCACCTGCCACAGGGGTAGCTGTGCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: LRARPEKFRKSPRTT*ALPSPATGVAVQPV
Trigger: GACTGGCTGCACAGCTACCCCTGTGGCAGGTGAAGGCAGTGCTCAGGTAGTCCTGGGACTCTTTCTAAACTTCTCTGGCCTGGCCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS-3UTR CAA 90 bp GCTGGACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAAAGTAGCAGACCAGTTTaGCAGCAGAGCCCCATGGGA +
Preference number: 5 (lower is better)
Translates to: AGPFPRIGIEPISFALAESSRPV*QQSPMG
Trigger: TCCCATGGGGCTCTGCTGCAAAACTGGTCTGCTACT...TTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp TCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGCTCTGGCTGCCATCCTGCTGGAAGGCATaGGCCAAGTCCTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: SEPITKERVALGAALWLPSCWKA*AKSCTR
Trigger: CCTGGTACAGGACTTGGCCAATGCCTTCCAGCAGGA...TGGCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp GCTGGACCGTTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAATGCACCACTCTCTTCTaGCCTCTTGTAGAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: AGPFPRIGIEPISFALAECTTLF*PLVEGA
Trigger: AGCCCCCTCTACAAGAGGCAAGAAGAGAGTGGTGCA...TTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAACGGTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp CCGTGTGCATGCTCTCTGGCCCATTTCAGGCCTTGGTTCTGGACTCAGAATTGGACAGCAGCATCCACGTaGAGGCTGGCTGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: PCACSLAHFRPWFWTQNWTAAST*RLAAAP
Trigger: TGGTGCAGCAGCCAGCCTCAACGTGGATGCTGCTGT...CCAATTCTGAGTCCAGAACCAAGGCCTGAAATGGGCCAGAGAGCATGCACACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp TGTTTCCAGGCTTCTGAGCCAATAACCAAAGAACGTGTTGCACTTGGGGCCGCGAAGAACGTGTTGCACTaGGGGCCGCGCTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: CFQASEPITKERVALGAAKNVLH*GPRSGC
Trigger: GCAGCCAGAGCGCGGCCCCAAGTGCAACACGTTCTT...CGCGGCCCCAAGTGCAACACGTTCTTTGGTTATTGGCTCAGAAGCCTGGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp GAAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGTGGACAGGGCCCTTTTaGCTCCAGCAGCCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: EGKYGRPTAEAQCHRQHLWTGPF*LQQPQA
Trigger: GGCCTGAGGCTGCTGGAGCAAAAAGGGCCCTGTCCA...CAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS GCA 90 bp TTACCAGCCAAACCTCACAGCAGCCGGTGGGCAGGGATGGAGGGTTaGACCAGACCAGTAAAGGGGATTTGGCTGGGCACTAATAGCAAC +
Preference number: 5 (lower is better)
Translates to: LPAKPHSSRWAGMEG*TRPVKGIWLGTNSN
Trigger: GTTGCTATTAGTGCCCAGCCAAATCCCCTTTACTGGTCTGGTGCAACCCTCCATCCCTGCCCACCGGCTGCTGTGAGGTTTGGCTGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp TTCCTGGATCTTAGAAGTGTCACCTCTTCCACCCTCTCAGGGCCCTaGACTTTCGCCCTCAAGCTGCCTCTGGATCTAGCAAAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: FLDLRSVTSSTLSGP*TFALKLPLDLAKAL
Trigger: CAGGGCCTTTGCTAGATCCAGAGGCAGCTTGAGGGCGAAAGTCCAGGGCCCTGAGAGGGTGGAAGAGGTGACACTTCTAAGATCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS-3UTR CAA 90 bp CCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGTCAGTAGCAGACCAGTTTaGCAGCAGAGCCCCATGGGA +
Preference number: 5 (lower is better)
Translates to: PEDWDRAHQLCPGRTCLVSSRPV*QQSPMG
Trigger: TCCCATGGGGCTCTGCTGCAAAACTGGTCTGCTACT...GACAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp TCCAGCAGCCTCAGGCCTGTGAGTGGCTGTAGATTCTGGAGACAGCCTTGGGCTCCGTCAAAGCTGTATTaGCGCAGAAACCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: SSSLRPVSGCRFWRQPWAPSKLY*RRNLMA
Trigger: GGCCATCAGGTTTCTGCGCAAATACAGCTTTGACGG...AGCCCAAGGCTGTCTCCAGAATCTACAGCCACTCACAGGCCTGAGGCTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS-3UTR CAA 90 bp AAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCAAGCATCCCTCCTTCCTaGGTGAAGGGGCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: KYGRPTAEAQCHRQHLASSIPPS*VKGPGV
Trigger: CACTCCAGGCCCCTTCACCAAGGAAGGAGGGATGCT...TGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp AGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACATGTGACATCCTGGATTCTCTGTTaGGTGGCCCCCTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: RPTAEAQCHRQHLASHVTSWILC*VAPFQE
Trigger: CTCCTGGAAGGGGGCCACCAAACAGAGAATCCAGGA...TGTCACATGTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp GCAGGCTGTAGAGTGATCCTGGGCCCAGCCTCAAAGCTGGGACTGGAGGGGCTTAACAGGGTCTTCAGCTaGGGATTCATCTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AGCRVILGPASKLGLEGLNRVFS*GFIFFR
Trigger: CCTGAAGAAGATGAATCCCAAGCTGAAGACCCTGTT...AAGCCCCTCCAGTCCCAGCTTTGAGGCTGGGCCCAGGATCACTCTACAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367229.6
ENST00000491855.5
CDS GCA 90 bp ATTCCCCCATGGAAAGAAGACACCCGGGCACTTCTCACCTGCTCCTaGTTCTGCAGTTCCCTTGGCAGTTTCCTTAGAGGTGTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: IPPWKEDTRALLTCS*FCSSLGSFLRGVPA
Trigger: TGCTGGGACACCTCTAAGGAAACTGCCAAGGGAACTGCAGAAGCAGGAGCAGGTGAGAAGTGCCCGGGTGTCTTCTTTCCATGGGGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 90 bp GGTGAGGCCTTACCTTGCCTGCCTGACACTTTGCTGGGCTCAGAATaGTTCTCCAAATTCCCCCATGGAAAGAAGACACCCGGGCACTTC +
Preference number: 5 (lower is better)
Translates to: GEALPCLPDTLLGSE*FSKFPHGKKTPGHF
Trigger: GAAGTGCCCGGGTGTCTTCTTTCCATGGGGGAATTTGGAGAAGCATTCTGAGCCCAGCAAAGTGTCAGGCAGGCAAGGTAAGGCCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS-3UTR CAA 90 bp GAAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGTCCTGCTGGAAGGCATaGGCCAAGTCCTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: EGKYGRPTAEAQCHRQHLSCWKA*AKSCTR
Trigger: CCTGGTACAGGACTTGGCCAATGCCTTCCAGCAGGA...CAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp AGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACATGTGACACTTCTGCAGCCACTGTaGCACAGCAGCATCCACGTT +
Preference number: 5 (lower is better)
Translates to: RPTAEAQCHRQHLASHVTLLQPL*HSSIHV
Trigger: AACGTGGATGCTGCTGTGCAACAGTGGCTGCAGAAG...TGTCACATGTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGGGGTATCGGCCCTGGTaGCAGGAGAAGCCGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GTNQRFILQVKGAAQETQGYRPW*QEKPAK
Trigger: CTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACCC...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp TGCATGCTCTCTGGCCCATTTCAGGCCTTGGTTCTGGACTCAGAATTGGTTAGAGGGTATCGGCCCTGGTaGCAGGAGAAGCCGGCAAAG +
Preference number: 5 (lower is better)
Translates to: CMLSGPFQALVLDSELVRGYRPW*QEKPAK
Trigger: CTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACCC...TCTAACCAATTCTGAGTCCAGAACCAAGGCCTGAAATGGGCCAGAGAGCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp CAGGTTCAGAGGGCTGACCTGGTTTTGGAACTTCAAGCTCTGGGGTGCCTGAAGAGGGCTGACCTGGTTTaGGAACTTCAAGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: QVQRADLVLELQALGCLKRADLV*ELQALG
Trigger: CCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCT...CTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS GCA 90 bp CAGGTTCAGAGGGCTGACCTGGTTTTGGAACTTCAAGCTCTGGGGTaGCTGAAGGCAAGTATGGAAGACTCAGTTCCTGCCGTAGCGTCT +
Preference number: 5 (lower is better)
Translates to: QVQRADLVLELQALG*LKASMEDSVPAVAS
Trigger: AGACGCTACGGCAGGAACTGAGTCTTCCATACTTGCCTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCTCTGAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255427.7
ENST00000367229.6
CDS-3UTR CAA 90 bp CACCTGGCTCTGACCTGCGGATGTTTTGGAGTCAACAGTGTGCTTAGAGAGCCTAGTAGCAGACCAGTTTaGCAGCAGAGCCCCATGGGA +
Preference number: 5 (lower is better)
Translates to: HLALTCGCFGVNSVLREPSSRPV*QQSPMG
Trigger: TCCCATGGGGCTCTGCTGCAAAACTGGTCTGCTACT...AGGCTCTCTAAGCACACTGTTGACTCCAAAACATCCGCAGGTCAGAGCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp TTCCCGAGGATTGGGATAGAGCCCATCAGCTTTGCCCTGGCAGAACGTGTCTTGAGGTTCTGGGCGATTTaGTCCACCTCGTATCCAGCA +
Preference number: 5 (lower is better)
Translates to: FPRIGIEPISFALAERVLRFWAI*STSYPA
Trigger: TGCTGGATACGAGGTGGACAAAATCGCCCAGAACCT...CAAGACACGTTCTGCCAGGGCAAAGCTGATGGGCTCTATCCCAATCCTCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp AATGCTGAGTGGCTGCTCGCAGAGCGCTTAAATCAGGGAAAAGTTCTTCTCTGCATGCCAAGGATCAGCTaGCTGGCAGGGGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: NAEWLLAERLNQGKVLLCMPRIS*LAGVPF
Trigger: GAAGGGGACCCCTGCCAGCAAGCTGATCCTTGGCAT...GCAGAGAAGAACTTTTCCCTGATTTAAGCGCTCTGCGAGCAGCCACTCAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp GAAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGCAGCATTTGCAGGAGTaGCTGAACACCAGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: EGKYGRPTAEAQCHRQHLQHLQE*LNTRPV
Trigger: GACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTG...CAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CAA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAACCTGCAGGAGCCAGATaGCGGCCCCCAGGGAAAACC +
Preference number: 5 (lower is better)
Translates to: KRKARLRAESLDKGRPQKPAGAR*RPPGKT
Trigger: GGTTTTCCCTGGGGGCCGCAATCTGGCTCCTGCAGG...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS TCA 90 bp CTGCCTCTGGATCTAGCAAAGGCCCTGAGCCATCTTTGGAATGGATaGGTTCGAAAAGCTGCATTAGAGTGGCTCCCCTCCTTCAACGCC +
Preference number: 5 (lower is better)
Translates to: LPLDLAKALSHLWNG*VRKAALEWLPSFNA
Trigger: GGCGTTGAAGGAGGGGAGCCACTCTAATGCAGCTTTTCGAACTCATCCATTCCAAAGATGGCTCAGGGCCTTTGCTAGATCCAGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 90 bp CGAGTCAGGCAGCTGGGTTCCAGACCAGCTCTCTTGCTTCTCCACTaGCCTCTCTCAAACTGTTTCTCCATCTCTAGAAGTCCACCAAGT +
Preference number: 5 (lower is better)
Translates to: RVRQLGSRPALLLLH*PLSNCFSISRSPPS
Trigger: ACTTGGTGGACTTCTAGAGATGGAGAAACAGTTTGAGAGAGGGCAGTGGAGAAGCAAGAGAGCTGGTCTGGAACCCAGCTGCCTGACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513472.5
CDS CCA 90 bp TGGCCAGAACTCAGTCATGTGACCACGCCTACCCACACAGGAGACTaGGAAATGCAGTCTTCATTCTGGGCAGCCATGTTTCCTGCTACA +
Preference number: 5 (lower is better)
Translates to: WPELSHVTTPTHTGD*EMQSSFWAAMFPAT
Trigger: TGTAGCAGGAAACATGGCTGCCCAGAATGAAGACTGCATTTCCCAGTCTCCTGTGTGGGTAGGCGTGGTCACATGACTGAGTTCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS-3UTR CAA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAACTGGGGTCCAAGTCCTaGGGCAGGAAGCGAGCCTCC +
Preference number: 5 (lower is better)
Translates to: TNQRFILQVKGAAQETQKLGSKS*GRKRAS
Trigger: GGAGGCTCGCTTCCTGCCCAAGGACTTGGACCCCAG...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp AGGGGCTTTAGCGACTCAATTCCAGGTGCAGCATTTGCAGGAGTTGCTGAACACTGCACCACTCTCTTCTaGCCTCTTGTAGAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: RGFSDSIPGAAFAGVAEHCTTLF*PLVEGA
Trigger: AGCCCCCTCTACAAGAGGCAAGAAGAGAGTGGTGCA...GTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAAAGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS-3UTR CAA 90 bp AGGGGCTTTAGCGACTCAATTCCAGGTGCAGCATTTGCAGGAGTTGCTGAACACCTTCTGCAGCCACTGTaGCACAGCAGCATCCACGTT +
Preference number: 5 (lower is better)
Translates to: RGFSDSIPGAAFAGVAEHLLQPL*HSSIHV
Trigger: AACGTGGATGCTGCTGTGCAACAGTGGCTGCAGAAG...GTGTTCAGCAACTCCTGCAAATGCTGCACCTGGAATTGAGTCGCTAAAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491855.5
CDS GCA 90 bp GTGTGTGGCAGTAGCTCAAGTGCTCTCAAATGTGGCCACAGTTCCTaGAGCCCGTGTCTGAGTGCTTTCTCTATGCAAACTCACAGGATC +
Preference number: 5 (lower is better)
Translates to: VCGSSSSALKCGHSS*SPCLSAFSMQTHRI
Trigger: GATCCTGTGAGTTTGCATAGAGAAAGCACTCAGACACGGGCTGCAGGAACTGTGGCCACATTTGAGAGCACTTGAGCTACTGCCACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 90 bp GGCAGTCAAACCAGTTGGAGAAGTGTGCTCTGTCCTATAAAAACGTaGTCCTTCCTGACGTCTACCCCATGTTGGTGGGCCCATGATCTC +
Preference number: 5 (lower is better)
Translates to: GSQTSWRSVLCPIKT*SFLTSTPCWWAHDL
Trigger: GAGATCATGGGCCCACCAACATGGGGTAGACGTCAGGAAGGAGCACGTTTTTATAGGACAGAGCACACTTCTCCAACTGGTTTGACTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp ACCTCCTATCAGGTGAGGCCTTACCTTGCCTGCCTGACACTTTGCTaGGCTCAGAATGCTTCTCCAAATTCCCCCATGGAAAGAAGACAC +
Preference number: 5 (lower is better)
Translates to: TSYQVRPYLACLTLC*AQNASPNSPMERRH
Trigger: GTGTCTTCTTTCCATGGGGGAATTTGGAGAAGCATTCTGAGCCCAGCAAAGTGTCAGGCAGGCAAGGTAAGGCCTCACCTGATAGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS-3UTR CAA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAGTAGCAGACCAGTTTaGCAGCAGAGCCCCATGGGA +
Preference number: 5 (lower is better)
Translates to: GTNQRFILQVKGAAQETQSSRPV*QQSPMG
Trigger: TCCCATGGGGCTCTGCTGCAAAACTGGTCTGCTACT...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp AATGCTGAGTGGCTGCTCGCAGAGCGCTTAAATCAGGGAAAAGTTCTTCTCTGCTGCACCACTCTCTTCTaGCCTCTTGTAGAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: NAEWLLAERLNQGKVLLCCTTLF*PLVEGA
Trigger: AGCCCCCTCTACAAGAGGCAAGAAGAGAGTGGTGCA...GCAGAGAAGAACTTTTCCCTGATTTAAGCGCTCTGCGAGCAGCCACTCAGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGCTTCTGCAGCCACTGTaGCACAGCAGCATCCACGTT +
Preference number: 5 (lower is better)
Translates to: GTNQRFILQVKGAAQETQLLQPL*HSSIHV
Trigger: AACGTGGATGCTGCTGTGCAACAGTGGCTGCAGAAG...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAGGGCTGACCTGGTTTaGGAACTTCAAGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: GTNQRFILQVKGAAQETQRADLV*ELQALG
Trigger: CCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCT...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTAACAGGGTCTTCAGCTaGGGATTCATCTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPNRVFS*GFIFFR
Trigger: CCTGAAGAAGATGAATCCCAAGCTGAAGACCCTGTT...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491855.5
ENST00000503786.1
CDS-3UTR CAA 90 bp AGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCACGAGTCCTCATGCTGCTaGGACATCAGTCATTTTGCA +
Preference number: 5 (lower is better)
Translates to: SMEDLQLKHSATGNTWPHESSCC*DISHFA
Trigger: TGCAAAATGACTGATGTCCAAGCAGCATGAGGACTC...GTGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS TCA 90 bp AGGGTTAATTGCAGCCTGAACGTTCATTTCAAAGACCTCACTTCCTaGATCCCAGGAGCATCCAGAAGAATGGCACCAAGGTGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RVNCSLNVHFKDLTS*IPGASRRMAPRWPS
Trigger: GCTGGGCCACCTTGGTGCCATTCTTCTGGATGCTCCTGGGATTCAGGAAGTGAGGTCTTTGAAATGAACGTTCAGGCTGCAATTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 90 bp GCTCAAGTGCTCTCAAATGTGGCCACAGTTCCTGCAGCCCGTGTCTaGGTGCTTTCTCTATGCAAACTCACAGGATCACCCTGTAACTTC +
Preference number: 5 (lower is better)
Translates to: AQVLSNVATVPAARV*VLSLCKLTGSPCNF
Trigger: GAAGTTACAGGGTGATCCTGTGAGTTTGCATAGAGAAAGCACTCAGACACGGGCTGCAGGAACTGTGGCCACATTTGAGAGCACTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 90 bp AGCAAAGGCCCTGAGCCATCTTTGGAATGGATGAGTTCGAAAAGCTaGATTAGAGTGGCTCCCCTCCTTCAACGCCACCTCATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: SKGPEPSLEWMSSKS*IRVAPLLQRHLIRV
Trigger: AACTCTGATGAGGTGGCGTTGAAGGAGGGGAGCCACTCTAATGCAGCTTTTCGAACTCATCCATTCCAAAGATGGCTCAGGGCCTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 90 bp TACACCTCCTATCAGGTGAGGCCTTACCTTGCCTGCCTGACACTTTaGTGGGCTCAGAATGCTTCTCCAAATTCCCCCATGGAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: YTSYQVRPYLACLTL*WAQNASPNSPMERR
Trigger: TCTTCTTTCCATGGGGGAATTTGGAGAAGCATTCTGAGCCCAGCAAAGTGTCAGGCAGGCAAGGTAAGGCCTCACCTGATAGGAGGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 90 bp AGACTAGGTACGAGGATACACCTCCTATCAGGTGAGGCCTTACCTTaGCTGCCTGACACTTTGCTGGGCTCAGAATGCTTCTCCAAATTC +
Preference number: 5 (lower is better)
Translates to: RLGTRIHLLSGEALP*LPDTLLGSECFSKF
Trigger: GAATTTGGAGAAGCATTCTGAGCCCAGCAAAGTGTCAGGCAGGCAAGGTAAGGCCTCACCTGATAGGAGGTGTATCCTCGTACCTAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp CAAGCTGCCTCTGGATCTAGCAAAGGCCCTGAGCCATCTTTGGAATaGATGAGTTCGAAAAGCTGCATTAGAGTGGCTCCCCTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: QAASGSSKGPEPSLE*MSSKSCIRVAPLLQ
Trigger: TTGAAGGAGGGGAGCCACTCTAATGCAGCTTTTCGAACTCATCCATTCCAAAGATGGCTCAGGGCCTTTGCTAGATCCAGAGGCAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp CGGTGGGCAGGGATGGAGGGTTGCACCAGACCAGTAAAGGGGATTTaGCTGGGCACTAATAGCAACCATGGTACTGTTATTTCTACTGTA +
Preference number: 5 (lower is better)
Translates to: RWAGMEGCTRPVKGI*LGTNSNHGTVISTV
Trigger: TACAGTAGAAATAACAGTACCATGGTTGCTATTAGTGCCCAGCCAAATCCCCTTTACTGGTCTGGTGCAACCCTCCATCCCTGCCCACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp TGTCCTATAAAAACGTGCTCCTTCCTGACGTCTACCCCATGTTGGTaGGCCCATGATCTCCTCCTAGACCTCTCAGCTGAAATCAGTCCT +
Preference number: 5 (lower is better)
Translates to: CPIKTCSFLTSTPCW*AHDLLLDLSAEISP
Trigger: AGGACTGATTTCAGCTGAGAGGTCTAGGAGGAGATCATGGGCCCACCAACATGGGGTAGACGTCAGGAAGGAGCACGTTTTTATAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp CTCTGTCCTATAAAAACGTGCTCCTTCCTGACGTCTACCCCATGTTaGTGGGCCCATGATCTCCTCCTAGACCTCTCAGCTGAAATCAGT +
Preference number: 5 (lower is better)
Translates to: LCPIKTCSFLTSTPC*WAHDLLLDLSAEIS
Trigger: ACTGATTTCAGCTGAGAGGTCTAGGAGGAGATCATGGGCCCACCAACATGGGGTAGACGTCAGGAAGGAGCACGTTTTTATAGGACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS-3UTR CAA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAATCCTGCTGGAAGGCATaGGCCAAGTCCTGTACCAGG +
Preference number: 5 (lower is better)
Translates to: KRKARLRAESLDKGRPQKSCWKA*AKSCTR
Trigger: CCTGGTACAGGACTTGGCCAATGCCTTCCAGCAGGA...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp GGCACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAGGTTCTGGGCGATTTaGTCCACCTCGTATCCAGCA +
Preference number: 5 (lower is better)
Translates to: GTNQRFILQVKGAAQETQRFWAI*STSYPA
Trigger: TGCTGGATACGAGGTGGACAAAATCGCCCAGAACCT...CTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAAATGCCAAGGATCAGCTaGCTGGCAGGGGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: TNQRFILQVKGAAQETQKMPRIS*LAGVPF
Trigger: GAAGGGGACCCCTGCCAGCAAGCTGATCCTTGGCAT...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAAAGCATCCCTCCTTCCTaGGTGAAGGGGCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: TNQRFILQVKGAAQETQKSIPPS*VKGPGV
Trigger: CACTCCAGGCCCCTTCACCAAGGAAGGAGGGATGCT...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp CACCTGGCTCTGACCTGCGGATGTTTTGGAGTCAACAGTGTGCTTAGAGAGCCTAACAGGGTCTTCAGCTaGGGATTCATCTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: HLALTCGCFGVNSVLREPNRVFS*GFIFFR
Trigger: CCTGAAGAAGATGAATCCCAAGCTGAAGACCCTGTT...AGGCTCTCTAAGCACACTGTTGACTCCAAAACATCCGCAGGTCAGAGCCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp GCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTAACGTAAGCATGACCTaGGTTTTGAAGCTCTCCACA +
Preference number: 5 (lower is better)
Translates to: ASMEDLQLKHSATGNTWPNVSMT*VLKLST
Trigger: TGTGGAGAGCTTCAAAACCAAGGTCATGCTTACGTT...AGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS TCA 90 bp TATCTGGCTCCAAGTCCTTGTCCTGTAATCATCATGGTACAGCAGTaGGGGGTTTCCCTGTATGAGGCATCTACTCACTGCCCAGTGATG +
Preference number: 5 (lower is better)
Translates to: YLAPSPCPVIIMVQQ*GVSLYEASTHCPVM
Trigger: CATCACTGGGCAGTGAGTAGATGCCTCATACAGGGAAACCCCTCACTGCTGTACCATGATGATTACAGGACAAGGACTTGGAGCCAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp CACAACAGCAGCAATTGTGTTGTTATTGAGTGGCCCTTGCCCTCATaGTACAAGGTAGCACCTGCCTACCAAGTAGCAAAACAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: HNSSNCVVIEWPLPS*YKVAPAYQVAKQRE
Trigger: CTCCCTCTGTTTTGCTACTTGGTAGGCAGGTGCTACCTTGTACCATGAGGGCAAGGGCCACTCAATAACAACACAATTGCTGCTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS-3UTR CAA 90 bp AAAAGGAAGGCAAGGCTGAGAGCAGAAAGCCTGGATAAAGGAAGACCACAGAAACAGCATTTGCAGGAGTaGCTGAACACCAGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: KRKARLRAESLDKGRPQKQHLQE*LNTRPV
Trigger: GACAGGCCTGGTGTTCAGCAACTCCTGCAAATGCTG...TTTCTGTGGTCTTCCTTTATCCAGGCTTTCTGCTCTCAGCCTTGCCTTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp AAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGGCCTCAAGCATGACCTTGGTTTaGAAGCTCTCCACATCATCA +
Preference number: 5 (lower is better)
Translates to: KYGRPTAEAQCHRQHLASSMTLV*KLSTSS
Trigger: TGATGATGTGGAGAGCTTCAAAACCAAGGTCATGCT...TGAGGCCAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS TCA 90 bp AAGCTGTATTTGCGCAGAAACCTGATGGCCGAGTTGACAAAGGTCTaGCGGTTGTTGGCCGTGGCTACCATATCTGTGAACATCTTCTTC +
Preference number: 5 (lower is better)
Translates to: KLYLRRNLMAELTKV*RLLAVATISVNIFF
Trigger: GAAGAAGATGTTCACAGATATGGTAGCCACGGCCAACAACCGTCAGACCTTTGTCAACTCGGCCATCAGGTTTCTGCGCAAATACAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255427.7
CDS CCA 90 bp AAGTTAAGCAGCTTGCCCAAGGTGACAGATAGTAATTGGCTGAACTaGGATCAGATCCCGGTCTATCTGGCTCCAAGTCCTTGTCCTGTA +
Preference number: 5 (lower is better)
Translates to: KLSSLPKVTDSNWLN*DQIPVYLAPSPCPV
Trigger: TACAGGACAAGGACTTGGAGCCAGATAGACCGGGATCTGATCCCAGTTCAGCCAATTACTATCTGTCACCTTGGGCAAGCTGCTTAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS-3UTR CAA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAATGCACCACTCTCTTCTaGCCTCTTGTAGAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: TNQRFILQVKGAAQETQKCTTLF*PLVEGA
Trigger: AGCCCCCTCTACAAGAGGCAAGAAGAGAGTGGTGCA...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS-3UTR CAA 90 bp CTCTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGATTTATTTTGAGCATCCCTCCTTCCTaGGTGAAGGGGCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: LLSHHIFGKRGTNQRFILSIPPS*VKGPGV
Trigger: CACTCCAGGCCCCTTCACCAAGGAAGGAGGGATGCT...CAAAATAAATCTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp CACCTGGCTCTGACCTGCGGATGTTTTGGAGTCAACAGTGTGCTTAGAGAGCCTGTTCTGGACTCAGAATaGGTTAGAATCAGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: HLALTCGCFGVNSVLREPVLDSE*VRISLQ
Trigger: CTGAAGACTGATTCTAACCAATTCTGAGTCCAGAAC...AGGCTCTCTAAGCACACTGTTGACTCCAAAACATCCGCAGGTCAGAGCCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp CAAACAGGATTTATCTCGAAGACCCCTGAGTACCAGGGGTCTGAATTCTTAGTGGGCCCATTTCAGGCCTaGGTTCTGGACTCAGAATTG +
Preference number: 5 (lower is better)
Translates to: QTGFISKTPEYQGSEFLVGPFQA*VLDSEL
Trigger: CAATTCTGAGTCCAGAACCAAGGCCTGAAATGGGCC...CACTAAGAATTCAGACCCCTGGTACTCAGGGGTCTTCGAGATAAATCCTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS-3UTR CAA 90 bp GAAGGCAAGTATGGAAGACCTACAGCTGAAGCACAGTGCCACAGGCAACACCTGTGGACATCAGTCATTTaGCAGTCTCCTTGTCTTAAC +
Preference number: 5 (lower is better)
Translates to: EGKYGRPTAEAQCHRQHLWTSVI*QSPCLN
Trigger: GTTAAGACAAGGAGACTGCAAAATGACTGATGTCCA...CAGGTGTTGCCTGTGGCACTGTGCTTCAGCTGTAGGTCTTCCATACTTGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS CCA 90 bp AGTAGAAAGTTATTGGAGACTAGCAGCTTCTACCACACTAGATTCTaGCCTCGGGCAAGTCTCATGGCCTCTCTAGGCTTGGAGATAATG +
Preference number: 5 (lower is better)
Translates to: SRKLLETSSFYHTRF*PRASLMASLGLEIM
Trigger: CATTATCTCCAAGCCTAGAGAGGCCATGAGACTTGCCCGAGGCCAGAATCTAGTGTGGTAGAAGCTGCTAGTCTCCAATAACTTTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp ACCACGCCTACCCACACAGGAGACTGGGAAATGCAGTCTTCATTCTaGGCAGCCATGTTTCCTGCTACAACTTTTCTTACCCTGATAAAA +
Preference number: 5 (lower is better)
Translates to: TTPTHTGDWEMQSSF*AAMFPATTFLTLIK
Trigger: TTTTATCAGGGTAAGAAAAGTTGTAGCAGGAAACATGGCTGCCCAGAATGAAGACTGCATTTCCCAGTCTCCTGTGTGGGTAGGCGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS-3UTR CAA 90 bp ACAAACCAAAGATTTATTTTGCAAGTGAAAGGGGCAGCCCAGGAGACCCAGAAAAGGTTCTGGGCGATTTaGTCCACCTCGTATCCAGCA +
Preference number: 5 (lower is better)
Translates to: TNQRFILQVKGAAQETQKRFWAI*STSYPA
Trigger: TGCTGGATACGAGGTGGACAAAATCGCCCAGAACCT...TTTCTGGGTCTCCTGGGCTGCCCCTTTCACTTGCAAAATAAATCTTTGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
CDS TCA 90 bp AGCAGTGAGGGGTTTCCCTGTATGAGGCATCTACTCACTGCCCAGTaGTGGGAACTATTGTTAAAAGATCTCAGGCACACAAGAGAATCA +
Preference number: 5 (lower is better)
Translates to: SSEGFPCMRHLLTAQ*WELLLKDLRHTRES
Trigger: TGATTCTCTTGTGTGCCTGAGATCTTTTAACAATAGTTCCCATCACTGGGCAGTGAGTAGATGCCTCATACAGGGAAACCCCTCACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 90 bp GTCGTTTACCAAGGATCTTACAGCCCTTTTAACTCAAAAGAGCCATaGAGCTGGCAACCTTCCTTGCTGAGACTAGGTACGAGGATACAC +
Preference number: 5 (lower is better)
Translates to: VVYQGSYSPFNSKEP*SWQPSLLRLGTRIH
Trigger: GTGTATCCTCGTACCTAGTCTCAGCAAGGAAGGTTGCCAGCTTCATGGCTCTTTTGAGTTAAAAGGGCTGTAAGATCCTTGGTAAACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 90 bp TGTTCTGCCCTCTCCTATTATCTGTGCAAATCTGAAGGCACTTTCTaGTCTGTCATGTACCTGATCTTTCCTGCCAGCCTAGACTGCTTT +
Preference number: 5 (lower is better)
Translates to: CSALSYYLCKSEGTF*SVMYLIFPASLDCF
Trigger: AAAGCAGTCTAGGCTGGCAGGAAAGATCAGGTACATGACAGAGCAGAAAGTGCCTTCAGATTTGCACAGATAATAGGAGAGGGCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp CTTTGTACGGCAGACAAGTGGACCAGATTCCTTAAAAGCAGAGCCTaGGACAGATTTCATGCATATCTTCTTCTGTTGGGGAAGAACCCT +
Preference number: 5 (lower is better)
Translates to: LCTADKWTRFLKSRA*DRFHAYLLLLGKNP
Trigger: AGGGTTCTTCCCCAACAGAAGAAGATATGCATGAAATCTGTCCCAGGCTCTGCTTTTAAGGAATCTGGTCCACTTGTCTGCCGTACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS-3UTR CAA 90 bp CTCTTAAGTCACCACATCTTTGGGAAGAGGGGCACAAACCAAAGATTTATTTTGCCGTCAAAGCTGTATTaGCGCAGAAACCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: LLSHHIFGKRGTNQRFILPSKLY*RRNLMA
Trigger: GGCCATCAGGTTTCTGCGCAAATACAGCTTTGACGG...CAAAATAAATCTTTGGTTTGTGCCCCTCTTCCCAAAGATGTGGTGACTTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367229.6
CDS GCA 90 bp GTTTCTAGAATCCACACAAAACAGGAATCCTACAGAATGATGGCTTaGAGAGGACATTGTAACAGGGCAGTCAAACCAGTTGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: VSRIHTKQESYRMMA*RGHCNRAVKPVGEV
Trigger: CACTTCTCCAACTGGTTTGACTGCCCTGTTACAATGTCCTCTGCAAGCCATCATTCTGTAGGATTCCTGTTTTGTGTGGATTCTAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 90 bp TTTCACTGGTTTCTAGAATCCACACAAAACAGGAATCCTACAGAATaGTGGCTTGCAGAGGACATTGTAACAGGGCAGTCAAACCAGTTG +
Preference number: 5 (lower is better)
Translates to: FHWFLESTQNRNPTE*WLAEDIVTGQSNQL
Trigger: CAACTGGTTTGACTGCCCTGTTACAATGTCCTCTGCAAGCCATCATTCTGTAGGATTCCTGTTTTGTGTGGATTCTAGAAACCAGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 90 bp AGTTTCTTTGTAAGCTGCAGTAAATCCTTAGGGTTAATTGCAGCCTaGACGTTCATTTCAAAGACCTCACTTCCTGAATCCCAGGAGCAT +
Preference number: 5 (lower is better)
Translates to: SFFVSCSKSLGLIAA*TFISKTSLPESQEH
Trigger: ATGCTCCTGGGATTCAGGAAGTGAGGTCTTTGAAATGAACGTTCAGGCTGCAATTAACCCTAAGGATTTACTGCAGCTTACAAAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp TCCTGCTACAACTTTTCTTACCCTGATAAAATAGTAGAAAGTTATTaGAGACTAGCAGCTTCTACCACACTAGATTCTGGCCTCGGGCAA +
Preference number: 5 (lower is better)
Translates to: SCYNFSYPDKIVESY*RLAASTTLDSGLGQ
Trigger: TTGCCCGAGGCCAGAATCTAGTGTGGTAGAAGCTGCTAGTCTCCAATAACTTTCTACTATTTTATCAGGGTAAGAAAAGTTGTAGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 90 bp AGGAGACTGGGAAATGCAGTCTTCATTCTGGGCAGCCATGTTTCCTaGTACAACTTTTCTTACCCTGATAAAATAGTAGAAAGTTATTGG +
Preference number: 5 (lower is better)
Translates to: RRLGNAVFILGSHVS*YNFSYPDKIVESYW
Trigger: CCAATAACTTTCTACTATTTTATCAGGGTAAGAAAAGTTGTAGCAGGAAACATGGCTGCCCAGAATGAAGACTGCATTTCCCAGTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 90 bp AGGCTTGGAGATAATGCTATCTTACAACAAACAATTTGTATTAACTaGAGCCTCCGATGCAAAGGATCTAGCACAGAGCCTGGAATATAC +
Preference number: 5 (lower is better)
Translates to: RLGDNAILQQTICIN*SLRCKGSSTEPGIY
Trigger: GTATATTCCAGGCTCTGTGCTAGATCCTTTGCATCGGAGGCTTCAGTTAATACAAATTGTTTGTTGTAAGATAGCATTATCTCCAAGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 90 bp GCAATCTTTAACATTAATTGGATATGCACTGTATATGCCAGGCACTaGGCTAATCTCTTCATCTGTATTATATTATTTAACCCTCATAGC +
Preference number: 5 (lower is better)
Translates to: AIFNINWICTVYARH*ANLFICIILFNPHS
Trigger: GCTATGAGGGTTAAATAATATAATACAGATGAAGAGATTAGCCCAGTGCCTGGCATATACAGTGCATATCCAATTAATGTTAAAGATTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 72 bp GGGCGTGCATGTGACCGCGTCTGTGCACCGGGGCTGTaGTGTGGGCTTTGTGCTGAGCCAAAGGTGGGGCTT +
Preference number: 6 (lower is better)
Translates to: GRACDRVCAPGL*CGLCAEPKVGL
Trigger: AAGCCCCACCTTTGGCTCAGCACAAAGCCCACAGCACAGCCCCGGTGCACAGACGCGGTCACATGCACGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460619.1
CDS GCA 72 bp TTTGGTGTCCTTCATACCCTCTCGTGGCTGCCTCCCTaGCACGGCCCTGGCTCAGGCCCTGGTCACCTTGCC +
Preference number: 6 (lower is better)
Translates to: FGVLHTLSWLPP*HGPGSGPGHLA
Trigger: GGCAAGGTGACCAGGGCCTGAGCCAGGGCCGTGGCAGGGAGGCAGCCACGAGAGGGTATGAAGGACACCAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp GAAGGATGGCATAGGAGACTCCCACCAAGAAGGCAGTaGTCCTGGGCTTGGGCGCCCACTCCCTGCCAGAGA +
Preference number: 6 (lower is better)
Translates to: EGWHRRLPPRRQ*SWAWAPTPCQR
Trigger: TCTCTGGCAGGGAGTGGGCGCCCAAGCCCAGGATCACTGCCTTCTTGGTGGGAGTCTCCTATGCCATCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 72 bp TGGCCTTTCCTGCCCCTGTGTCAGACAAGCATCGGCTaGAAGCCCCAAGTAAGGCAGCTTCCATTCCCGGGG +
Preference number: 6 (lower is better)
Translates to: WPFLPLCQTSIG*KPQVRQLPFPG
Trigger: CCCCGGGAATGGAAGCTGCCTTACTTGGGGCTTGCAGCCGATGCTTGTCTGACACAGGGGCAGGAAAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 72 bp GAGGGAGCCAGGCTGTGGTGTCAGCTGTGGCTGAGCTaGGGCCTGATTTCATGGGGATCCCTGAAGCATGTG +
Preference number: 6 (lower is better)
Translates to: EGARLWCQLWLS*GLISWGSLKHV
Trigger: CACATGCTTCAGGGATCCCCATGAAATCAGGCCGCAGCTCAGCCACAGCTGACACCACAGCCTGGCTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp AAATCCACTAGCCCTGTAGCCATCTCTGGGTGTGTGTaGACGGGCGTGCATGTGACCGCGTCTGTGCACCGG +
Preference number: 6 (lower is better)
Translates to: KSTSPVAISGCV*TGVHVTASVHR
Trigger: CCGGTGCACAGACGCGGTCACATGCACGCCCGTCCACACACACCCAGAGATGGCTACAGGGCTAGTGGATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460619.1
CDS CAA 72 bp TTGGCCAAGTCCTGTACCAGGGTTGTGAAGCGCTCCTaGTCTACGGCAGGGCTCCCCTGGCTTCCTGGGTAC +
Preference number: 6 (lower is better)
Translates to: LAKSCTRVVKRS*STAGLPWLPGY
Trigger: GTACCCAGGAAGCCAGGGGAGCCCTGCCGTAGACAAGGAGCGCTTCACAACCCTGGTACAGGACTTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
ENST00000503786.1
CDS CAA 72 bp CAAACCTCACAGCAGCCGGTGGGCAGGGATGGAGGGTaGCACCAGACCAGTAAAGGGGATTTGGCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: QTSQQPVGRDGG*HQTSKGDLAGH
Trigger: GTGCCCAGCCAAATCCCCTTTACTGGTCTGGTGCAACCCTCCATCCCTGCCCACCGGCTGCTGTGAGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 90 bp CTCAGTTCCTGCCGTAGCGTCTGGATGAGGGGGTATCGGCCCTGGTaGCAGGAGAAGCCGGCAAAGTCATCTAAGTCCAGTGCCCAGACC +
Preference number: 6 (lower is better)
Translates to: LSSCRSVWMRGYRPW*QEKPAKSSKSSAQT
Trigger: GGTCTGGGCACTGGACTTAGATGACTTTGCCGGCTTCTCCTGCAACCAGGGCCGATACCCCCTCATCCAGACGCTACGGCAGGAACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000479483.1
ENST00000484834.5
CDS GCA 72 bp AAACCTCACAGCAGCCGGTGGGCAGGGATGGAGGGTTaGACCAGACCAGTAAAGGGGATTTGGCTGGGCACT +
Preference number: 6 (lower is better)
Translates to: KPHSSRWAGMEG*TRPVKGIWLGT
Trigger: AGTGCCCAGCCAAATCCCCTTTACTGGTCTGGTGCAACCCTCCATCCCTGCCCACCGGCTGCTGTGAGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 72 bp AATCCAGGTTCCTGTACCAGGGTTGTGAAGCGCTCCTaGTCTACGGCAGGGCTCCCCTGGCTTCCTGGGTAC +
Preference number: 6 (lower is better)
Translates to: NPGSCTRVVKRS*STAGLPWLPGY
Trigger: GTACCCAGGAAGCCAGGGGAGCCCTGCCGTAGACAAGGAGCGCTTCACAACCCTGGTACAGGAACCTGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 90 bp AGACGCCTGGAGCCTGGAGACATGATGGGAGTCATAGCCTTGGACTaGCCTACACACTCCTCATATTGCCCCAGCCTCAAGGGCAGACCG +
Preference number: 6 (lower is better)
Translates to: RRLEPGDMMGVIALD*PTHSSYCPSLKGRP
Trigger: CGGTCTGCCCTTGAGGCTGGGGCAATATGAGGAGTGTGTAGGCAAGTCCAAGGCTATGACTCCCATCATGTCTCCAGGCTCCAGGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp TGGAACCGCTGCACTCAGAAGAAGGCGTTCCTTCCCTaGGGTCTGGGCTTCCTGCTGGAAGGCATTGGCCAA +
Preference number: 6 (lower is better)
Translates to: WNRCTQKKAFLP*GLGFLLEGIGQ
Trigger: TTGGCCAATGCCTTCCAGCAGGAAGCCCAGACCTCAGGGAAGGAACGCCTTCTTCTGAGTGCAGCGGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
ENST00000503786.1
CDS TCA 72 bp TTGCAGCAGAGCCCCATGGGATCATCAGCAGGACCATaGAACGAGTCAGGCAGCTGGGTTCCAGACCAGCTC +
Preference number: 6 (lower is better)
Translates to: LQQSPMGSSAGP*NESGSWVPDQL
Trigger: GAGCTGGTCTGGAACCCAGCTGCCTGACTCGTTTCATGGTCCTGCTGATGATCCCATGGGGCTCTGCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513472.5
CDS GCA 72 bp CTGTTGCACAGCAGCATCCACGTTGAGGCTGGCTGCTaGACCACTCTCTTCTTGCCTCTTGTAGAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: LLHSSIHVEAGC*TTLFLPLVEGA
Trigger: AGCCCCCTCTACAAGAGGCAAGAAGAGAGTGGTGCAGCAGCCAGCCTCAACGTGGATGCTGCTGTGCAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000484834.5
ENST00000491855.5
ENST00000503786.1
ENST00000506427.1
CDS GCA 72 bp CCACTGTTGCACAGCAGCATCCACGTTGAGGCTGGCTaGTGCACCACTCTCTTCTTGCCTCTTGTAGAGGGG +
Preference number: 6 (lower is better)
Translates to: PLLHSSIHVEAG*CTTLFLPLVEG
Trigger: CCCCTCTACAAGAGGCAAGAAGAGAGTGGTGCAGCAGCCAGCCTCAACGTGGATGCTGCTGTGCAACAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000484834.5
ENST00000491855.5
ENST00000503786.1
ENST00000506427.1
CDS CCA 72 bp AGAAGGCGTTCCTTCCCTGAGGTCTGGGCTTCCTGCTaGAAGGCATTGGCCAAGTCCTGTACCAGGGTTGTG +
Preference number: 6 (lower is better)
Translates to: RRRSFPEVWASC*KALAKSCTRVV
Trigger: CACAACCCTGGTACAGGACTTGGCCAATGCCTTCCAGCAGGAAGCCCAGACCTCAGGGAAGGAACGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
ENST00000503786.1
CDS CCA 72 bp CACCTCGTATCCAGCATCCACATAGGTCTGCCCAGCTaGAACCGCTGCACTCAGAAGAAGGCGTTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: HLVSSIHIGLPS*NRCTQKKAFLP
Trigger: GGGAAGGAACGCCTTCTTCTGAGTGCAGCGGTTCCAGCTGGGCAGACCTATGTGGATGCTGGATACGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000491855.5
ENST00000503786.1
CDS GCA 72 bp GAAGACACCCGGGCACTTCTCACCTGCTCCTGCTTCTaGAGTTCCCTTGGCAGTTTCCTTAGAGGTGTCCCA +
Preference number: 6 (lower is better)
Translates to: EDTRALLTCSCF*SSLGSFLRGVP
Trigger: TGGGACACCTCTAAGGAAACTGCCAAGGGAACTGCAGAAGCAGGAGCAGGTGAGAAGTGCCCGGGTGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp CTACACCAGAGTTCATCTTGTCTTGAGGTCGGGGACTaGCCTTTCCTGCCCCTGTGTCAGACAAGCATCGGC +
Preference number: 6 (lower is better)
Translates to: LHQSSSCLEVGD*PFLPLCQTSIG
Trigger: GCCGATGCTTGTCTGACACAGGGGCAGGAAAGGCCAGTCCCCGACCTCAAGACAAGATGAACTCTGGTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 72 bp ATCCACGTTGAGGCTGGCTGCTGCACCACTCTCTTCTaGCCTCTTGTAGAGGGGGCTGTTATGTCCCGTGAC +
Preference number: 6 (lower is better)
Translates to: IHVEAGCCTTLF*PLVEGAVMSRD
Trigger: GTCACGGGACATAACAGCCCCCTCTACAAGAGGCAAGAAGAGAGTGGTGCAGCAGCCAGCCTCAACGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000484834.5
ENST00000491855.5
ENST00000503786.1
ENST00000506427.1
CDS CAA 90 bp CTAAGAAGACGCCTGGAGCCTGGAGACATGATGGGAGTCATAGCCTaGGACTTGCCTACACACTCCTCATATTGCCCCAGCCTCAAGGGC +
Preference number: 6 (lower is better)
Translates to: LRRRLEPGDMMGVIA*DLPTHSSYCPSLKG
Trigger: GCCCTTGAGGCTGGGGCAATATGAGGAGTGTGTAGGCAAGTCCAAGGCTATGACTCCCATCATGTCTCCAGGCTCCAGGCGTCTTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp AGGCCAGAGAAGTTTAGAAAGAGTCCCAGGACTACCTaGGCACTGCCTTCACCTGCCACAGGGGTAGCTGTG +
Preference number: 6 (lower is better)
Translates to: RPEKFRKSPRTT*ALPSPATGVAV
Trigger: CACAGCTACCCCTGTGGCAGGTGAAGGCAGTGCTCAGGTAGTCCTGGGACTCTTTCTAAACTTCTCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp CCTGAAGCATGTGCTACACCAGAGTTCATCTTGTCTTaGGGTCGGGGACTGGCCTTTCCTGCCCCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: PEACATPEFILS*GRGLAFPAPVS
Trigger: TGACACAGGGGCAGGAAAGGCCAGTCCCCGACCTCAAGACAAGATGAACTCTGGTGTAGCACATGCTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp TGTGCAGCCAGTCTTGTGGCAGAGGCTGGGGTTTCCTaGATCTTAGAAGTGTCACCTCTTCCACCCTCTCAG +
Preference number: 6 (lower is better)
Translates to: CAASLVAEAGVS*ILEVSPLPPSQ
Trigger: CTGAGAGGGTGGAAGAGGTGACACTTCTAAGATCCAGGAAACCCCAGCCTCTGCCACAAGACTGGCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 72 bp GGGCACTTCTCACCTGCTCCTGCTTCTGCAGTTCCCTaGGCAGTTTCCTTAGAGGTGTCCCAGCAAGCTAGA +
Preference number: 6 (lower is better)
Translates to: GHFSPAPASAVP*AVSLEVSQQAR
Trigger: TCTAGCTTGCTGGGACACCTCTAAGGAAACTGCCAAGGGAACTGCAGAAGCAGGAGCAGGTGAGAAGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 90 bp CGCCCTCAAGCTGCCTCTGGATCTAGCAAAGGCCCTGAGCCATCTTaGGAATGGATGAGTTCGAAAAGCTGCATTAGAGTGGCTCCCCTC +
Preference number: 6 (lower is better)
Translates to: RPQAASGSSKGPEPS*EWMSSKSCIRVAPL
Trigger: GAGGGGAGCCACTCTAATGCAGCTTTTCGAACTCATCCATTCCAAAGATGGCTCAGGGCCTTTGCTAGATCCAGAGGCAGCTTGAGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 72 bp AGGGCTGACCTGGTTTTGGAACTTCAAGCTCTGGGGTaGCTGAAGGCAAGTATGGAAGACTCAGTTCCTGCC +
Preference number: 6 (lower is better)
Translates to: RADLVLELQALG*LKASMEDSVPA
Trigger: GGCAGGAACTGAGTCTTCCATACTTGCCTTCAGGCACCCCAGAGCTTGAAGTTCCAAAACCAGGTCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255427.7
ENST00000367229.6
CDS GCA 72 bp ACGAGGATACACCTCCTATCAGGTGAGGCCTTACCTTaGCTGCCTGACACTTTGCTGGGCTCAGAATGCTTC +
Preference number: 6 (lower is better)
Translates to: TRIHLLSGEALP*LPDTLLGSECF
Trigger: GAAGCATTCTGAGCCCAGCAAAGTGTCAGGCAGGCAAGGTAAGGCCTCACCTGATAGGAGGTGTATCCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp TGTAGGGCACCTTCTGATCCTGGATTCTCTGTTTGGTaGCCCCCTTCCAGGAGCAGACTTCATAGTAGGCCA +
Preference number: 6 (lower is better)
Translates to: CRAPSDPGFSVW*PPSRSRLHSRP
Trigger: TGGCCTACTATGAAGTCTGCTCCTGGAAGGGGGCCACCAAACAGAGAATCCAGGATCAGAAGGTGCCCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000484834.5
ENST00000491855.5
ENST00000503786.1
CDS CCA 72 bp TTTGCTGGGCTCAGAATGCTTCTCCAAATTCCCCCATaGAAAGAAGACACCCGGGCACTTCTCACCTGCTCC +
Preference number: 6 (lower is better)
Translates to: FAGLRMLLQIPP*KEDTRALLTCS
Trigger: GGAGCAGGTGAGAAGTGCCCGGGTGTCTTCTTTCCATGGGGGAATTTGGAGAAGCATTCTGAGCCCAGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp AAAACGTGCTCCTTCCTGACGTCTACCCCATGTTGGTaGGCCCATGATCTCCTCCTAGACCTCTCAGCTGAA +
Preference number: 6 (lower is better)
Translates to: KTCSFLTSTPCW*AHDLLLDLSAE
Trigger: TTCAGCTGAGAGGTCTAGGAGGAGATCATGGGCCCACCAACATGGGGTAGACGTCAGGAAGGAGCACGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 72 bp GAGCCTGGAGACATGATGGGAGTCATAGCCTTGGACTaGCCTACACACTCCTCATATTGCCCCAGCCTCAAG +
Preference number: 6 (lower is better)
Translates to: EPGDMMGVIALD*PTHSSYCPSLK
Trigger: CTTGAGGCTGGGGCAATATGAGGAGTGTGTAGGCAAGTCCAAGGCTATGACTCCCATCATGTCTCCAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 72 bp AAACGAGTCAGGCAGCTGGGTTCCAGACCAGCTCTCTaGCTTCTCCACTGCCCTCTCTCAAACTGTTTCTCC +
Preference number: 6 (lower is better)
Translates to: KRVRQLGSRPAL*LLHCPLSNCFS
Trigger: GGAGAAACAGTTTGAGAGAGGGCAGTGGAGAAGCAAGAGAGCTGGTCTGGAACCCAGCTGCCTGACTCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513472.5
CDS TCA 72 bp TTGCGCAGAAACCTGATGGCCGAGTTGACAAAGGTCTaGCGGTTGTTGGCCGTGGCTACCATATCTGTGAAC +
Preference number: 6 (lower is better)
Translates to: LRRNLMAELTKV*RLLAVATISVN
Trigger: GTTCACAGATATGGTAGCCACGGCCAACAACCGTCAGACCTTTGTCAACTCGGCCATCAGGTTTCTGCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000484834.5
ENST00000491855.5
ENST00000503786.1
ENST00000513472.5
CDS TCA 72 bp CTCTCAAATGTGGCCACAGTTCCTGCAGCCCGTGTCTaGGTGCTTTCTCTATGCAAACTCACAGGATCACCC +
Preference number: 6 (lower is better)
Translates to: LSNVATVPAARV*VLSLCKLTGSP
Trigger: GGGTGATCCTGTGAGTTTGCATAGAGAAAGCACTCAGACACGGGCTGCAGGAACTGTGGCCACATTTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 72 bp CCTGAGCCATCTTTGGAATGGATGAGTTCGAAAAGCTaGATTAGAGTGGCTCCCCTCCTTCAACGCCACCTC +
Preference number: 6 (lower is better)
Translates to: PEPSLEWMSSKS*IRVAPLLQRHL
Trigger: GAGGTGGCGTTGAAGGAGGGGAGCCACTCTAATGCAGCTTTTCGAACTCATCCATTCCAAAGATGGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 72 bp TATCAGGTGAGGCCTTACCTTGCCTGCCTGACACTTTaGTGGGCTCAGAATGCTTCTCCAAATTCCCCCATG +
Preference number: 6 (lower is better)
Translates to: YQVRPYLACLTL*WAQNASPNSPM
Trigger: CATGGGGGAATTTGGAGAAGCATTCTGAGCCCAGCAAAGTGTCAGGCAGGCAAGGTAAGGCCTCACCTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 72 bp ACCAGTTGGAGAAGTGTGCTCTGTCCTATAAAAACGTaGTCCTTCCTGACGTCTACCCCATGTTGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: TSWRSVLCPIKT*SFLTSTPCWWA
Trigger: GGCCCACCAACATGGGGTAGACGTCAGGAAGGAGCACGTTTTTATAGGACAGAGCACACTTCTCCAACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp AGATGTAGGGCACCTTCTGATCCTGGATTCTCTGTTTaGTGGCCCCCTTCCAGGAGCAGACTTCATAGTAGG +
Preference number: 6 (lower is better)
Translates to: RCRAPSDPGFSV*WPPSRSRLHSR
Trigger: CCTACTATGAAGTCTGCTCCTGGAAGGGGGCCACCAAACAGAGAATCCAGGATCAGAAGGTGCCCTACATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000255427.7
ENST00000367229.6
ENST00000484834.5
ENST00000491855.5
ENST00000503786.1
CDS CCA 72 bp CTCAGTCATGTGACCACGCCTACCCACACAGGAGACTaGGAAATGCAGTCTTCATTCTGGGCAGCCATGTTT +
Preference number: 6 (lower is better)
Translates to: LSHVTTPTHTGD*EMQSSFWAAMF
Trigger: AAACATGGCTGCCCAGAATGAAGACTGCATTTCCCAGTCTCCTGTGTGGGTAGGCGTGGTCACATGACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp ATAAAAACGTGCTCCTTCCTGACGTCTACCCCATGTTaGTGGGCCCATGATCTCCTCCTAGACCTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: IKTCSFLTSTPC*WAHDLLLDLSA
Trigger: AGCTGAGAGGTCTAGGAGGAGATCATGGGCCCACCAACATGGGGTAGACGTCAGGAAGGAGCACGTTTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 72 bp CTGGGATCAGATCCCGGTCTATCTGGCTCCAAGTCCTaGTCCTGTAATCATCATGGTACAGCAGTGAGGGGT +
Preference number: 6 (lower is better)
Translates to: LGSDPGLSGSKS*SCNHHGTAVRG
Trigger: ACCCCTCACTGCTGTACCATGATGATTACAGGACAAGGACTTGGAGCCAGATAGACCGGGATCTGATCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 90 bp AGGACCATGAAACGAGTCAGGCAGCTGGGTTCCAGACCAGCTCTCTaGCTTCTCCACTGCCCTCTCTCAAACTGTTTCTCCATCTCTAGA +
Preference number: 6 (lower is better)
Translates to: RTMKRVRQLGSRPAL*LLHCPLSNCFSISR
Trigger: TCTAGAGATGGAGAAACAGTTTGAGAGAGGGCAGTGGAGAAGCAAGAGAGCTGGTCTGGAACCCAGCTGCCTGACTCGTTTCATGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513472.5
CDS CAA 90 bp TTGGCTGAACTGGGATCAGATCCCGGTCTATCTGGCTCCAAGTCCTaGTCCTGTAATCATCATGGTACAGCAGTGAGGGGTTTCCCTGTA +
Preference number: 6 (lower is better)
Translates to: LAELGSDPGLSGSKS*SCNHHGTAVRGFPV
Trigger: TACAGGGAAACCCCTCACTGCTGTACCATGATGATTACAGGACAAGGACTTGGAGCCAGATAGACCGGGATCTGATCCCAGTTCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 90 bp ATACACCTCCTATCAGGTGAGGCCTTACCTTGCCTGCCTGACACTTaGCTGGGCTCAGAATGCTTCTCCAAATTCCCCCATGGAAAGAAG +
Preference number: 6 (lower is better)
Translates to: IHLLSGEALPCLPDT*LGSECFSKFPHGKK
Trigger: CTTCTTTCCATGGGGGAATTTGGAGAAGCATTCTGAGCCCAGCAAAGTGTCAGGCAGGCAAGGTAAGGCCTCACCTGATAGGAGGTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp GATCTAGCAAAGGCCCTGAGCCATCTTTGGAATGGATaGGTTCGAAAAGCTGCATTAGAGTGGCTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: DLAKALSHLWNG*VRKAALEWLPS
Trigger: GGAGGGGAGCCACTCTAATGCAGCTTTTCGAACTCATCCATTCCAAAGATGGCTCAGGGCCTTTGCTAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp GCAGCTGTATTGGGTCCCAGTCCAACCTCTTCCCTGTaGCATTCAGGCTCTGGTCGTTTACCAAGGATCTTA +
Preference number: 6 (lower is better)
Translates to: AAVLGPSPTSSL*HSGSGRLPRIL
Trigger: TAAGATCCTTGGTAAACGACCAGAGCCTGAATGTCACAGGGAAGAGGTTGGACTGGGACCCAATACAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 72 bp TTACCTTGCCTGCCTGACACTTTGCTGGGCTCAGAATaGTTCTCCAAATTCCCCCATGGAAAGAAGACACCC +
Preference number: 6 (lower is better)
Translates to: LPCLPDTLLGSE*FSKFPHGKKTP
Trigger: GGGTGTCTTCTTTCCATGGGGGAATTTGGAGAAGCATTCTGAGCCCAGCAAAGTGTCAGGCAGGCAAGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp TTATTGGAGACTAGCAGCTTCTACCACACTAGATTCTaGCCTCGGGCAAGTCTCATGGCCTCTCTAGGCTTG +
Preference number: 6 (lower is better)
Translates to: LLETSSFYHTRF*PRASLMASLGL
Trigger: CAAGCCTAGAGAGGCCATGAGACTTGCCCGAGGCCAGAATCTAGTGTGGTAGAAGCTGCTAGTCTCCAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 72 bp CAGACACTGCTGCATAACGCGTCTACTTACTTCTCTTaGGCCAGAACTCAGTCATGTGACCACGCCTACCCA +
Preference number: 6 (lower is better)
Translates to: QTLLHNASTYFS*ARTQSCDHAYP
Trigger: TGGGTAGGCGTGGTCACATGACTGAGTTCTGGCCAAAGAGAAGTAAGTAGACGCGTTATGCAGCAGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp TGCAGCCTGAACGTTCATTTCAAAGACCTCACTTCCTaGATCCCAGGAGCATCCAGAAGAATGGCACCAAGG +
Preference number: 6 (lower is better)
Translates to: CSLNVHFKDLTS*IPGASRRMAPR
Trigger: CCTTGGTGCCATTCTTCTGGATGCTCCTGGGATTCAGGAAGTGAGGTCTTTGAAATGAACGTTCAGGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp CCAAGTCCTTGTCCTGTAATCATCATGGTACAGCAGTaGGGGGTTTCCCTGTATGAGGCATCTACTCACTGC +
Preference number: 6 (lower is better)
Translates to: PSPCPVIIMVQQ*GVSLYEASTHC
Trigger: GCAGTGAGTAGATGCCTCATACAGGGAAACCCCTCACTGCTGTACCATGATGATTACAGGACAAGGACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS GCA 72 bp AGTAGCTCAAGTGCTCTCAAATGTGGCCACAGTTCCTaGAGCCCGTGTCTGAGTGCTTTCTCTATGCAAACT +
Preference number: 6 (lower is better)
Translates to: SSSSALKCGHSS*SPCLSAFSMQT
Trigger: AGTTTGCATAGAGAAAGCACTCAGACACGGGCTGCAGGAACTGTGGCCACATTTGAGAGCACTTGAGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 72 bp GCTGCCTCTGGATCTAGCAAAGGCCCTGAGCCATCTTaGGAATGGATGAGTTCGAAAAGCTGCATTAGAGTG +
Preference number: 6 (lower is better)
Translates to: AASGSSKGPEPS*EWMSSKSCIRV
Trigger: CACTCTAATGCAGCTTTTCGAACTCATCCATTCCAAAGATGGCTCAGGGCCTTTGCTAGATCCAGAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp AATCATCATGGTACAGCAGTGAGGGGTTTCCCTGTATaGGGCATCTACTCACTGCCCAGTGATGGGAACTAT +
Preference number: 6 (lower is better)
Translates to: NHHGTAVRGFPV*GIYSLPSDGNY
Trigger: ATAGTTCCCATCACTGGGCAGTGAGTAGATGCCTCATACAGGGAAACCCCTCACTGCTGTACCATGATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp AAGTTAAGCAGCTTGCCCAAGGTGACAGATAGTAATTaGCTGAACTGGGATCAGATCCCGGTCTATCTGGCT +
Preference number: 6 (lower is better)
Translates to: KLSSLPKVTDSN*LNWDQIPVYLA
Trigger: AGCCAGATAGACCGGGATCTGATCCCAGTTCAGCCAATTACTATCTGTCACCTTGGGCAAGCTGCTTAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 90 bp GGAGCCTGGATGCTGAGTCCTCATGCTGCTTGGACATCAGTCATTTaGCAGTCTCCTTGTCTTAACGTAAGCATGACCTTGGTTTTGAAG +
Preference number: 6 (lower is better)
Translates to: GAWMLSPHAAWTSVI*QSPCLNVSMTLVLK
Trigger: CTTCAAAACCAAGGTCATGCTTACGTTAAGACAAGGAGACTGCAAAATGACTGATGTCCAAGCAGCATGAGGACTCAGCATCCAGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503786.1
CDS TCA 72 bp GGGTTTCCCTGTATGAGGCATCTACTCACTGCCCAGTaGTGGGAACTATTGTTAAAAGATCTCAGGCACACA +
Preference number: 6 (lower is better)
Translates to: GFPCMRHLLTAQ*WELLLKDLRHT
Trigger: TGTGTGCCTGAGATCTTTTAACAATAGTTCCCATCACTGGGCAGTGAGTAGATGCCTCATACAGGGAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp CAAGGATCTTACAGCCCTTTTAACTCAAAAGAGCCATaGAGCTGGCAACCTTCCTTGCTGAGACTAGGTACG +
Preference number: 6 (lower is better)
Translates to: QGSYSPFNSKEP*SWQPSLLRLGT
Trigger: CGTACCTAGTCTCAGCAAGGAAGGTTGCCAGCTTCATGGCTCTTTTGAGTTAAAAGGGCTGTAAGATCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp AGCAATTGTGTTGTTATTGAGTGGCCCTTGCCCTCATaGTACAAGGTAGCACCTGCCTACCAAGTAGCAAAA +
Preference number: 6 (lower is better)
Translates to: SNCVVIEWPLPS*YKVAPAYQVAK
Trigger: TTTTGCTACTTGGTAGGCAGGTGCTACCTTGTACCATGAGGGCAAGGGCCACTCAATAACAACACAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp GCAGACAAGTGGACCAGATTCCTTAAAAGCAGAGCCTaGGACAGATTTCATGCATATCTTCTTCTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: ADKWTRFLKSRA*DRFHAYLLLLG
Trigger: CCCCAACAGAAGAAGATATGCATGAAATCTGTCCCAGGCTCTGCTTTTAAGGAATCTGGTCCACTTGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 72 bp CTTGCAGAGGACATTGTAACAGGGCAGTCAAACCAGTaGGAGAAGTGTGCTCTGTCCTATAAAAACGTGCTC +
Preference number: 6 (lower is better)
Translates to: LAEDIVTGQSNQ*EKCALSYKNVL
Trigger: GAGCACGTTTTTATAGGACAGAGCACACTTCTCCAACTGGTTTGACTGCCCTGTTACAATGTCCTCTGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp TCACAGGATCACCCTGTAACTTCTTACCAGAACTTCTaGACCAGACCTCAGGGTAGTAGAGTAAGTCACAGT +
Preference number: 6 (lower is better)
Translates to: SQDHPVTSYQNF*TRPQGSRVSHS
Trigger: ACTGTGACTTACTCTACTACCCTGAGGTCTGGTTCAGAAGTTCTGGTAAGAAGTTACAGGGTGATCCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 72 bp TTCTGGCCTCGGGCAAGTCTCATGGCCTCTCTAGGCTaGGAGATAATGCTATCTTACAACAAACAATTTGTA +
Preference number: 6 (lower is better)
Translates to: FWPRASLMASLG*EIMLSYNKQFV
Trigger: TACAAATTGTTTGTTGTAAGATAGCATTATCTCCAAGCCTAGAGAGGCCATGAGACTTGCCCGAGGCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp GTAAGCTGCAGTAAATCCTTAGGGTTAATTGCAGCCTaGACGTTCATTTCAAAGACCTCACTTCCTGAATCC +
Preference number: 6 (lower is better)
Translates to: VSCSKSLGLIAA*TFISKTSLPES
Trigger: GGATTCAGGAAGTGAGGTCTTTGAAATGAACGTTCAGGCTGCAATTAACCCTAAGGATTTACTGCAGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS TCA 72 bp TTTCTAGAATCCACACAAAACAGGAATCCTACAGAATaGTGGCTTGCAGAGGACATTGTAACAGGGCAGTCA +
Preference number: 6 (lower is better)
Translates to: FLESTQNRNPTE*WLAEDIVTGQS
Trigger: TGACTGCCCTGTTACAATGTCCTCTGCAAGCCATCATTCTGTAGGATTCCTGTTTTGTGTGGATTCTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 90 bp CACACTAGATTCTGGCCTCGGGCAAGTCTCATGGCCTCTCTAGGCTaGGAGATAATGCTATCTTACAACAAACAATTTGTATTAACTGAA +
Preference number: 6 (lower is better)
Translates to: HTRFWPRASLMASLG*EIMLSYNKQFVLTE
Trigger: TTCAGTTAATACAAATTGTTTGTTGTAAGATAGCATTATCTCCAAGCCTAGAGAGGCCATGAGACTTGCCCGAGGCCAGAATCTAGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CCA 72 bp AACTTTTCTTACCCTGATAAAATAGTAGAAAGTTATTaGAGACTAGCAGCTTCTACCACACTAGATTCTGGC +
Preference number: 6 (lower is better)
Translates to: NFSYPDKIVESY*RLAASTTLDSG
Trigger: GCCAGAATCTAGTGTGGTAGAAGCTGCTAGTCTCCAATAACTTTCTACTATTTTATCAGGGTAAGAAAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484834.5
CDS CAA 72 bp TTCATATTCATTACCTCATTCAATGTTACAGTAAGCTaGAGAGGTAGTGATCATGATCCCCACTTTATGAAT +
Preference number: 6 (lower is better)
Translates to: FIFITSFNVTVS*RGSDHDPHFMN
Trigger: ATTCATAAAGTGGGGATCATGATCACTACCTCTCAAGCTTACTGTAACATTGAATGAGGTAATGAATATGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484834.5