RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHID1 (Homo sapiens)

Ensembl gene IDs: ENSG00000177830

Ensembl transcript IDs: ENST00000323578.13, ENST00000429789.6, ENST00000436108.6, ENST00000449825.5, ENST00000454838.6, ENST00000524538.1, ENST00000524832.5, ENST00000525225.1, ENST00000526714.5, ENST00000528154.1, ENST00000528426.5, ENST00000528521.1, ENST00000528534.1, ENST00000528581.5, ENST00000529539.5, ENST00000530939.5, ENST00000531010.1, ENST00000531859.5, ENST00000532909.5, ENST00000533056.5, ENST00000533059.5, ENST00000534207.5, ENST00000534254.5

Found 956 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTaGGTCCGACCCAGGACCCCCTCCCCAGCTCCCGTCCTGAGGCGG +
Preference number: 1 (lower is better)
Translates to: ASLTSRRRLSQVWVP*VRPRTPSPAPVLRR
Trigger: CCGCCTCAGGACGGGAGCTGGGGAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532909.5
ENST00000534207.5
3UTR CCA 90 bp GCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTaGGTCCGACCCAGGACCCCCTCCCCAGCTCCCGTCCTGTGGAGG +
Preference number: 1 (lower is better)
Translates to: ASLTSRRRLSQVWVP*VRPRTPSPAPVLWR
Trigger: CCTCCACAGGACGGGAGCTGGGGAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR GCA 90 bp GGCCAGGCTCCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTaGCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGG +
Preference number: 1 (lower is better)
Translates to: GQAPLSPFLGQPLHP*RAGLGGDVWVALCR
Trigger: CCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGGAGCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR TCA 90 bp GGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTaGCGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCC +
Preference number: 1 (lower is better)
Translates to: GGNGCTCTVAARRPP*RPGGGFLKCGCLGS
Trigger: GGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
3UTR GCA 90 bp CTCGCTGGAAATGCCTGTCCCGATATGGCCCACGGGTCCTGCCGTTaGCCCTCACCATGCTCCCTGATGTGTCCAGGCTGGCCTGGGGGT +
Preference number: 1 (lower is better)
Translates to: LAGNACPDMAHGSCR*PSPCSLMCPGWPGG
Trigger: ACCCCCAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTGGGCCATATCGGGACAGGCATTTCCAGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR GCA 90 bp CCACCCCTCGCTGGAAATGCCTGTCCCGATATGGCCCACGGGTCCTaGCGTTGCCCCTCACCATGCTCCCTGATGTGTCCAGGCTGGCCT +
Preference number: 1 (lower is better)
Translates to: PPLAGNACPDMAHGS*RCPSPCSLMCPGWP
Trigger: AGGCCAGCCTGGACACATCAGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTGGGCCATATCGGGACAGGCATTTCCAGCGAGGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR GCA 90 bp GATCTGGCAATGCCTAGCTCCAGGCCCACACCACCCTCCCAGACCTaGGTGTCCCCCACCCTCACTCCAACAGAAGCCACAGGACCCCCG +
Preference number: 1 (lower is better)
Translates to: DLAMPSSRPTPPSQT*VSPTLTPTEATGPP
Trigger: CGGGGGTCCTGTGGCTTCTGTTGGAGTGAGGGTGGGGGACACGCAGGTCTGGGAGGGTGGTGTGGGCCTGGAGCTAGGCATTGCCAGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR TCA 90 bp AAACCCACATCCAGCCCAGGATGTGAGAAGCAGCCCAGAAAGGCCTaGGCCAGGCTGTCCTGGTGGGGCAGGTACTGTGGGCCCCGCCTG +
Preference number: 1 (lower is better)
Translates to: KPTSSPGCEKQPRKA*ARLSWWGRYCGPRL
Trigger: CAGGCGGGGCCCACAGTACCTGCCCCACCAGGACAGCCTGGCTCAGGCCTTTCTGGGCTGCTTCTCACATCCTGGGCTGGATGTGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR GCA 90 bp AGGCTGAAACCATCCAGCACGGGGGCCAGCTGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGGTCGGTCCCGGGGGTGATGGCAGGC +
Preference number: 1 (lower is better)
Translates to: RLKPSSTGASCSNSL*VNMPSWSVPGVMAG
Trigger: GCCTGCCATCACCCCCGGGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGATGGTTTCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR CCA 90 bp TCCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTaGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTGACACAC +
Preference number: 1 (lower is better)
Translates to: SSEPISRAAPAPLPC*TRWGRLGGSLQVTH
Trigger: GTGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR CCA 90 bp CACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTaGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTG +
Preference number: 1 (lower is better)
Translates to: HHLYLLCPCQAAAGR*ERLHLHCGSSQASL
Trigger: CAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
3UTR TCA 90 bp CCATGCTCCCTGATGTGTCCAGGCTGGCCTGGGGGTCGTGCTACCTaGGGCGGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGAGG +
Preference number: 1 (lower is better)
Translates to: PCSLMCPGWPGGRAT*GGRAEPRSRTSFKR
Trigger: CCTCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAGGTAGCACGACCCCCAGGCCAGCCTGGACACATCAGGGAGCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR TCA 90 bp CCGGGATGGTTCCAGAGCTTCCAAACCCACATCCAGCCCAGGATGTaGGAAGCAGCCCAGAAAGGCCTGAGCCAGGCTGTCCTGGTGGGG +
Preference number: 1 (lower is better)
Translates to: PGWFQSFQTHIQPRM*EAAQKGLSQAVLVG
Trigger: CCCCACCAGGACAGCCTGGCTCAGGCCTTTCTGGGCTGCTTCTCACATCCTGGGCTGGATGTGGGTTTGGAAGCTCTGGAACCATCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR GCA 90 bp GGAGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTaGAGCAGACCCGTCACAGCAAACGGAGTGGAGGCCTGTATTTCA +
Preference number: 1 (lower is better)
Translates to: GGWGVTWCPGPPTED*SRPVTANGVEACIS
Trigger: TGAAATACAGGCCTCCACTCCGTTTGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR TCA 90 bp GGAGGAGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTaGCCCCCTGCCCACTGCGCCCTAACATTACTGACTCTAAACCAG +
Preference number: 1 (lower is better)
Translates to: GGDPTMLPHHRLEMS*PPAHCALTLLTLNQ
Trigger: CTGGTTTAGAGTCAGTAATGTTAGGGCGCAGTGGGCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR TCA 90 bp CCCACCCTCACTCCAACAGAAGCCACAGGACCCCCGAGAACAACTTaGATGTTAGCGTCAGCACCTCTGGGGAGACAAGGTCAGTGCCCC +
Preference number: 1 (lower is better)
Translates to: PTLTPTEATGPPRTT*MLASAPLGRQGQCP
Trigger: GGGGCACTGACCTTGTCTCCCCAGAGGTGCTGACGCTAACATTCAAGTTGTTCTCGGGGGTCCTGTGGCTTCTGTTGGAGTGAGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR GCA 90 bp CCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTaGCCACTGCGCCCTAACATTACTGACTCTAAACCAGAACCCAGT +
Preference number: 1 (lower is better)
Translates to: PHHASSPPAGDVLTP*PLRPNITDSKPEPS
Trigger: ACTGGGTTCTGGTTTAGAGTCAGTAATGTTAGGGCGCAGTGGGCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR GCA 90 bp TGGAGGCCCGTGACCTCAAACATCTCACGGCCACGTCTCTTCAGCTaGAGCCAGACGGGTGAGATCTGTGTGAACTTGCTCCCAAAGACC +
Preference number: 1 (lower is better)
Translates to: WRPVTSNISRPRLFS*SQTGEICVNLLPKT
Trigger: GGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR CCA 90 bp GACCCCCGACTGAGGACTGCAGCAGACCCGTCACAGCAAACGGAGTaGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGA +
Preference number: 1 (lower is better)
Translates to: DPRLRTAADPSQQTE*RPVFHTCSLTPWLR
Trigger: TCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR TCA 90 bp GCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCATaGACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAG +
Preference number: 1 (lower is better)
Translates to: AFLPPRLSKVLGLQA*TAAHTTCISYARVK
Trigger: CTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
3UTR CCA 90 bp CAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATaGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCAC +
Preference number: 1 (lower is better)
Translates to: QTEWRPVFHTCSLTP*LRKEHVHRGGRNAH
Trigger: GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
3UTR CCA 90 bp TGGGTGAGCATGTGGATGAGGCCCACGCGCTTCTGGCTTAGCAGCTaGTTCCAGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTT +
Preference number: 1 (lower is better)
Translates to: WVSMWMRPTRFWLSS*FQTSTTKPSKCWFF
Trigger: AAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGCGTGGGCCTCATCCACATGCTCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR GCA 90 bp GCAGACCCGTCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTaGTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGA +
Preference number: 1 (lower is better)
Translates to: ADPSQQTEWRPVFHT*SLTPWLRKEHVHRG
Trigger: TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGACGGGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR GCA 90 bp GACATAGCCCAGTACATCCCCAGCAAAGTGTCTGTCCCGGGCCTTTaGCGAGCAGTAGCTGCGATGCTCAAGAACCACACTCTCAGCTTT +
Preference number: 1 (lower is better)
Translates to: DIAQYIPSKVSVPGL*RAVAAMLKNHTLSF
Trigger: AAAGCTGAGAGTGTGGTTCTTGAGCATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTGCTGGGGATGTACTGGGCTATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR TCA 90 bp ACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTCCTaGGTAGCCAGGAGTACAGGCACATGCCACCATGTCTTGCTAATT +
Preference number: 1 (lower is better)
Translates to: TAASTSSSDPPISAS*VARSTGTCHHVLLI
Trigger: AATTAGCAAGACATGGTGGCATGTGCCTGTACTCCTGGCTACTCAGGAGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR TCA 90 bp CTCAAACATCTCACGGCCACGTCTCTTCAGCTGCAGCCAGACGGGTaGGATCTGTGTGAACTTGCTCCCAAAGACCTTGGTGACATCGTA +
Preference number: 1 (lower is better)
Translates to: LKHLTATSLQLQPDG*DLCELAPKDLGDIV
Trigger: TACGATGTCACCAAGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR GCA 90 bp CGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTaGTCAGCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGA +
Preference number: 1 (lower is better)
Translates to: RSHRNAGSLPPGPRS*SAPLSHPHCLRRSG
Trigger: TCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
3UTR CAA 90 bp GGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTaGGGTCCGACCCAGGACCCCCTCCCCAGCTCCCGTCCTGAGGCG +
Preference number: 2 (lower is better)
Translates to: GLPDVQAEAFSSVGA*GPTQDPLPSSRPEA
Trigger: CGCCTCAGGACGGGAGCTGGGGAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532909.5
ENST00000534207.5
3UTR-3UTR GCA 90 bp CGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCGAGGCAGCCAGCGGATaGCCGGGTGGGAGGGGCTCG +
Preference number: 2 (lower is better)
Translates to: RPGGGFLKCGCLGSDPGPEAASG*PGGRGS
Trigger: CGAGCCCCTCCCACCCGGGCATCCGCTGGCTGCCTC...GGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR CAA 90 bp GGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTaGGGTCCGACCCAGGACCCCCTCCCCAGCTCCCGTCCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: GLPDVQAEAFSSVGA*GPTQDPLPSSRPVE
Trigger: CTCCACAGGACGGGAGCTGGGGAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR TCA 90 bp CGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCCCAGCTCCCGTCCTaGGGCGGCAGAGCTGAGCCA +
Preference number: 2 (lower is better)
Translates to: RPGGGFLKCGCLGSDPGPPQLPS*GGRAEP
Trigger: TGGCTCAGCTCTGCCGCCTCAGGACGGGAGCTGGGG...GGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACG
69% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000532909.5
ENST00000534207.5
3UTR-3UTR CCA 90 bp GGTCCCGGGGGTGATGGCAGGCGGGATGACCAGGAGGGCCAGCAGCCGGGCCTGAAGTGGGTGAGCATGTaGATGAGGCCCACGCGCTTC +
Preference number: 2 (lower is better)
Translates to: GPGGDGRRDDQEGQQPGLKWVSM*MRPTRF
Trigger: GAAGCGCGTGGGCCTCATCCACATGCTCACCCACTT...CAGGCCCGGCTGCTGGCCCTCCTGGTCATCCCGCCTGCCATCACCCCCGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR CAA 90 bp GGGCCAGGCTCCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTaGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: GPGSSEPISRAAPAP*PCWTRWGRLGGSLQ
Trigger: CTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGGAGCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp CAGGCTGTCCTGGTGGGGCAGGTACTGTGGGCCCCGCCTGCCCAGCTGACAGGAGGATGGGGAGTCACATaGTGCCCAGGACCCCCGACT +
Preference number: 2 (lower is better)
Translates to: QAVLVGQVLWAPPAQLTGGWGVT*CPGPPT
Trigger: AGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCC...TCCTGTCAGCTGGGCAGGCGGGGCCCACAGTACCTGCCCCACCAGGACAGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp CGCTGGAAATGCCTGTCCCGATATGGCCCACGGGTCCTGCCGTTGCCCCTCACCCAGCGGATGCCCGGGTaGGAGGGGCTCGAGCTCTCA +
Preference number: 2 (lower is better)
Translates to: RWKCLSRYGPRVLPLPLTQRMPG*EGLELS
Trigger: TGAGAGCTCGAGCCCCTCCCACCCGGGCATCCGCTG...GGTGAGGGGCAACGGCAGGACCCGTGGGCCATATCGGGACAGGCATTTCCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR CAA 90 bp CCTCGCTGGAAATGCCTGTCCCGATATGGCCCACGGGTCCTGCCGTaGCCCCTCACCATGCTCCCTGATGTGTCCAGGCTGGCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: PRWKCLSRYGPRVLP*PLTMLPDVSRLAWG
Trigger: CCCCCAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTGGGCCATATCGGGACAGGCATTTCCAGCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR TCA 90 bp TCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACCCACATCCAGCCCCCGCCTGCCCAGCTaGCAGGAGGCAGCCAGCGGA +
Preference number: 2 (lower is better)
Translates to: SRSGRVRDGSRASKPTSSPRLPS*QEAASG
Trigger: TCCGCTGGCTGCCTCCTGTCAGCTGGGCAGGCGGGG...GCTGGATGTGGGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR TCA 90 bp CGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCAGCCCAGAAAGGCCTaGGCCAGGCTGTCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: RPGGGFLKCGCLGSDPGPQPRKA*ARLSWW
Trigger: CCACCAGGACAGCCTGGCTCAGGCCTTTCTGGGCTG...GGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR GCA 90 bp GACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCAGCCCCTGCACCCTTaGCGTGCTGGACTCGGTGGG +
Preference number: 2 (lower is better)
Translates to: DVQAEAFSSVGALGPTQDQPLHP*RAGLGG
Trigger: CCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTG...GTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
3UTR-3UTR CCA 90 bp AGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGGATGGGGAGTCACATaGTGCCCAGGACCCCCGACT +
Preference number: 2 (lower is better)
Translates to: SPCTLAVLDSVGTSGWLSGWGVT*CPGPPT
Trigger: AGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCC...AGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp CGTTGCCCCTCACCATGCTCCCTGATGTGTCCAGGCTGGCCTGGGGGTCGTGCTCCGTGCTGGACTCGGTaGGGACGTCTGGGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: RCPSPCSLMCPGWPGGRAPCWTR*GRLGGS
Trigger: AGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGG...AGCACGACCCCCAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGGGGCAACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR TCA 90 bp CGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCGTGGCTCTCTGCAGGTaGCACACGTGCTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: RPGGGFLKCGCLGSDPGPVALCR*HTCCGW
Trigger: CCAGCCACAGCACGTGTGTCACCTGCAGAGAGCCAC...GGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR GCA 90 bp AGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTGCCCAGGGCAGAGCTGTCCCTaGGAGGGCCCTCGAATCCAG +
Preference number: 2 (lower is better)
Translates to: RPHHASSPPAGDVLTPCPGQSCP*EGPRIQ
Trigger: CTGGATTCGAGGGCCCTCGCAGGGACAGCTCTGCCC...TGGGCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp TGGGAGGGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGATGGGGAGTCACATaGTGCCCAGGACCCCCGACT +
Preference number: 2 (lower is better)
Translates to: WEGLELSGCPPARTHPGQGWGVT*CPGPPT
Trigger: AGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCC...CTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp ATCCAGCACGGGGGCCAGCTGCTCAAACTCCTTGTGCGTGAACATGCCCAGCTGGCCAGCAGCCGGGCCTaGTGCAGAGCCTCGGCCAAG +
Preference number: 2 (lower is better)
Translates to: IQHGGQLLKLLVREHAQLASSRA*CRASAK
Trigger: CTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCTGGC...CAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR-3UTR TCA 90 bp TGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCACCCCGCCTGCCCAGCTaGCAGGAGGCAGCCAGCGGA +
Preference number: 2 (lower is better)
Translates to: CCPAFLPPRLSKVLGLQAPRLPS*QEAASG
Trigger: TCCGCTGGCTGCCTCCTGTCAGCTGGGCAGGCGGGG...TGCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR TCA 90 bp CACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGGGGGGTCGTGCTACCTaGGGCGGCAGAGCTGAGCCA +
Preference number: 2 (lower is better)
Translates to: HHLYLLCPCQAAAGRWERGGRAT*GGRAEP
Trigger: TGGCTCAGCTCTGCCGCCTCAGGTAGCACGACCCCC...CCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR GCA 90 bp GACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCCGACTGAGGACTaGAGCAGACCCGTCACAGCA +
Preference number: 2 (lower is better)
Translates to: DVQAEAFSSVGALGPTQDPPTED*SRPVTA
Trigger: TGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGG...GTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR GCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTGAGGCAGCCAGCGGATaGCCGGGTGGGAGGGGCTCG +
Preference number: 2 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPEAASG*PGGRGS
Trigger: CGAGCCCCTCCCACCCGGGCATCCGCTGGCTGCCTC...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp TCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACCCACATCCAGCGCCAGGCTGTCCTGGTaGGGCAGGTACTGTGGGCCC +
Preference number: 2 (lower is better)
Translates to: SRSGRVRDGSRASKPTSSARLSW*GRYCGP
Trigger: GGGCCCACAGTACCTGCCCCACCAGGACAGCCTGGC...GCTGGATGTGGGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR TCA 90 bp GTTAGCGTCAGCACCTCTGGGGAGACAAGGTCAGTGCCCCAAAGCCAGTGGCAGCTGAGGCGGCAGAGCTaGGCCAAGGTCCAGGACCAG +
Preference number: 2 (lower is better)
Translates to: VSVSTSGETRSVPQSQWQLRRQS*AKVQDQ
Trigger: CTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAG...CTGCCACTGGCTTTGGGGCACTGACCTTGTCTCCCCAGAGGTGCTGACGCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp AGGAGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTGCTGGGTGGCAGGTATGTaGGGGTGGAGCTCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: RRPHHASSPPAGDVLTPCWVAGM*GWSSQL
Trigger: GAGCTGAGAGCTCCACCCCCACATACCTGCCACCCA...GCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR CAA 90 bp ATGAGGCTGAAACCATCCAGCACGGGGGCCAGCTGCTCAAACTCCTaGTGCGTGAACATGCCCAGCTGGTCGGTCCCGGGGGTGATGGCA +
Preference number: 2 (lower is better)
Translates to: MRLKPSSTGASCSNS*CVNMPSWSVPGVMA
Trigger: TGCCATCACCCCCGGGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGATGGTTTCAGCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR-3UTR GCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTCAGCCCCTGCACCCTTaGCGTGCTGGACTCGGTGGG +
Preference number: 2 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPQPLHP*RAGLGG
Trigger: CCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTG...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTGGCCTCCCCAGAGCCTaGACACCGCTGCATGGCAGG +
Preference number: 2 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPGLPRA*TPLHGR
Trigger: CCTGCCATGCAGCGGTGTCCAGGCTCTGGGGAGGCC...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp GGGGCCAGCTGCTCAAACTCCTTGTGCGTGAACATGCCCAGCTGGTCGGTCCCGAGAGCCTCGGCCAAGTaGGTGAGCATGTGGATGAGG +
Preference number: 2 (lower is better)
Translates to: GASCSNSLCVNMPSWSVPRASAK*VSMWMR
Trigger: CCTCATCCACATGCTCACCCACTTGGCCGAGGCTCT...CGGGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR-3UTR GCA 90 bp GGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGCCCCCGACTGAGGACTaGAGCAGACCCGTCACAGCA +
Preference number: 2 (lower is better)
Translates to: GFHHVAQRSSRHGFPKYWPPTED*SRPVTA
Trigger: TGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGG...CCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR GCA 90 bp GACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTATGGGGAGTCACATGGTaGCCAGGACCCCCGACTGAG +
Preference number: 2 (lower is better)
Translates to: DGVSPCCPAFLPPRLSKVWGVTW*PGPPTE
Trigger: CTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCA...TACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR GCA 90 bp ATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCGGGCAGAGCTGTCCCTaGGAGGGCCCTCGAATCCAG +
Preference number: 2 (lower is better)
Translates to: MLPSVPPATAFQSTGITGGQSCP*EGPRIQ
Trigger: CTGGATTCGAGGGCCCTCGCAGGGACAGCTCTGCCC...GCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp GGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGTGCTCACTCACTCCATaGCTTAGAAAAGAACACGTC +
Preference number: 2 (lower is better)
Translates to: GRWERLHLHCGSSQASLTCSLTP*LRKEHV
Trigger: GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA...CGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp GGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGACCCTCACAGCAAACGGAGTaGAGGCCTGTATTTCACACC +
Preference number: 2 (lower is better)
Translates to: GLELSGCPPARTHPGQGPSQQTE*RPVFHT
Trigger: GGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA...GGGTCCCTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp ATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCGGCTGGCCAGGTGGGTaGCAGGTATGTGGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: MLPSVPPATAFQSTGITGGWPGG*QVCGGG
Trigger: TCCACCCCCACATACCTGCCACCCACCTGGCCAGCC...GCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp ACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAAGCACCCTTGCCGTGCTaGACTCGGTGGGGACGTCTG +
Preference number: 2 (lower is better)
Translates to: THHLYLLCPCQAAAGRWEAPLPC*TRWGRL
Trigger: CAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGC...TTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
3UTR-3UTR CCA 90 bp CGGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCCTGGACACCGCTGCATaGCAGGGTGGGTGTAGCCTG +
Preference number: 2 (lower is better)
Translates to: RSQLTAASTSSSDPPISALDTAA*QGGCSL
Trigger: CAGGCTACACCCACCCTGCCATGCAGCGGTGTCCAG...GGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR GCA 90 bp AGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTCCTGTATTTCACACCTaGTCACTCACTCCATGGCTT +
Preference number: 2 (lower is better)
Translates to: SPCTLAVLDSVGTSGWLSPVFHT*SLTPWL
Trigger: AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG...AGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR GCA 90 bp ACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAATGGGGAGTCACATGGTaGCCAGGACCCCCGACTGAG +
Preference number: 2 (lower is better)
Translates to: THHLYLLCPCQAAAGRWEWGVTW*PGPPTE
Trigger: CTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCA...TTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp ACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGCCCCTCATGGGAGGATaGGGAGTCACATGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: TPLVSPMPVSSSSRAVGTPLMGG*GVTWCP
Trigger: TGGGCACCATGTGACTCCCCATCCTCCCATGAGGGG...CGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp ATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCCTGATGTGTCCAGGCTaGCCTGGGGGTCGTGCTACC +
Preference number: 2 (lower is better)
Translates to: MLPSVPPATAFQSTGITGLMCPG*PGGRAT
Trigger: GGTAGCACGACCCCCAGGCCAGCCTGGACACATCAG...GCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp CACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGAGGCTTTCTCAAGTGTaGGTGCCTTGGGTCCGACCC +
Preference number: 2 (lower is better)
Translates to: HHLYLLCPCQAAAGRWERRLSQV*VPWVRP
Trigger: GGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCT...CCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
3UTR-3UTR GCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTACCTATGCCCTCTACTaGCCACCTCAGCCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPTYALY*PPQPCG
Trigger: CCCACAGGGCTGAGGTGGGCAGTAGAGGGCATAGGT...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR GCA 90 bp ACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAAACCTATGCCCTCTACTaGCCACCTCAGCCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: THHLYLLCPCQAAAGRWETYALY*PPQPCG
Trigger: CCCACAGGGCTGAGGTGGGCAGTAGAGGGCATAGGT...TTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp ATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCCCTCGAATCCAGGAGTaGGCGAGTCCGGGATGGTTC +
Preference number: 2 (lower is better)
Translates to: MLPSVPPATAFQSTGITGPRIQE*ASPGWF
Trigger: GAACCATCCCGGACTCGCCCACTCCTGGATTCGAGG...GCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp ATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCGTGGGGACGTCTGGGTaGCTCTCTGCAGGTGACACA +
Preference number: 2 (lower is better)
Translates to: MLPSVPPATAFQSTGITGVGTSG*LSAGDT
Trigger: TGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCAC...GCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp ACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAAGTGGGGACGTCTGGGTaGCTCTCTGCAGGTGACACA +
Preference number: 2 (lower is better)
Translates to: THHLYLLCPCQAAAGRWEVGTSG*LSAGDT
Trigger: TGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCAC...TTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR TCA 90 bp TGGAGGCCCGTGACCTCAAACATCTCACGGCCACGTCTCTTCAGCTGCAGCCAGCGGGTGAGATCTGTGTaGACTTGCTCCCAAAGACCT +
Preference number: 2 (lower is better)
Translates to: WRPVTSNISRPRLFSCSQRVRSV*TCSQRP
Trigger: AGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCG...CTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR-3UTR GCA 90 bp TTCCAGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCTCTGTCCCGGGCCTTTaGCGAGCAGTAGCTGCGATG +
Preference number: 2 (lower is better)
Translates to: FQTSTTKPSKCWFFATWTSVPGL*RAVAAM
Trigger: CATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGA...GGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR-3UTR GCA 90 bp ACGGTCTTGCTCAGCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAAAGCAGCCGGGCCTGGTaGAGAGCCTCGGCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: TVLLSSSISSSLSKTFRKSSRAW*RASAKW
Trigger: CCACTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCT...TTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR-3UTR CCA 90 bp ATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCTGGGCGAGTCCGGGATaGTTCCAGAGCTTCCAAACC +
Preference number: 2 (lower is better)
Translates to: MLPSVPPATAFQSTGITGWASPG*FQSFQT
Trigger: GGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCA...GCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR TCA 90 bp ATTACAGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAACCTCACCATGCTCCCTaGTGTGTCCAGGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: ITGMNRRTHHLYLLCPCQPHHAP*CVQAGL
Trigger: CAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGG...TTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTGCAGGTATGTGGGGGTaGAGCTCTCAGCTCTATCAC +
Preference number: 2 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPAGMWG*SSQLYH
Trigger: GTGATAGAGCTGAGAGCTCCACCCCCACATACCTGC...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp CACCCTCACTCCAACAGAAGCCACAGGACCCCCGAGAACAACTTGAATGTTAGCGTGGGGACGTCTGGGTaGCTCTCTGCAGGTGACACA +
Preference number: 2 (lower is better)
Translates to: HPHSNRSHRTPENNLNVSVGTSG*LSAGDT
Trigger: TGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCAC...GCTAACATTCAAGTTGTTCTCGGGGGTCCTGTGGCTTCTGTTGGAGTGAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp CGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATCTCCTTGGTCCACGTCGTaGAGGCCCGTGACCTCAAAC +
Preference number: 2 (lower is better)
Translates to: RNAGSLPPGPRSCSAPLSPWSTS*RPVTSN
Trigger: GTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGG...AGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR-3UTR CCA 90 bp ATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATGTGAACATGCCCAGCTaGTCGGTCCCGGGGGTGATG +
Preference number: 2 (lower is better)
Translates to: IEMLVLCHLDHGLAQLLYVNMPS*SVPGVM
Trigger: CATCACCCCCGGGACCGACCAGCTGGGCATGTTCAC...ATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR-3UTR TCA 90 bp AGCCAGACGGGTGAGATCTGTGTGAACTTGCTCCCAAAGACCTTGGTGACATCGGGCTGTTCCATGGAGTaGCATAGCCCAGTACATCCC +
Preference number: 2 (lower is better)
Translates to: SQTGEICVNLLPKTLVTSGCSME*HSPVHP
Trigger: GGGATGTACTGGGCTATGTCACTCCATGGAACAGCC...CGATGTCACCAAGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR-3UTR GCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTCACTTGTATCTCCTATaGCCGTGTCAAGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPHLYLL*PCQAAA
Trigger: TGCTGCTGCTTGACACGGGCATAGGAGATACAAGTG...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp TGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCATCACAGCAAACGGAGTaGAGGCCTGTATTTCACACC +
Preference number: 2 (lower is better)
Translates to: CCPAFLPPRLSKVLGLQASQQTE*RPVFHT
Trigger: GGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA...TGCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR GCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTCCTGTATTTCACACCTaGTCACTCACTCCATGGCTT +
Preference number: 2 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPPVFHT*SLTPWL
Trigger: AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CCA 90 bp GTCGTGCTACCTGAGGCGGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGATGCTCACTCACTCCATaGCTTAGAAAAGAACACGTC +
Preference number: 2 (lower is better)
Translates to: VVLPEAAELSQGPGPVSRCSLTP*LRKEHV
Trigger: GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA...TCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAGGTAGCACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR GCA 90 bp TACAGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCCCTGTATTTCACACCTaGTCACTCACTCCATGGCTT +
Preference number: 2 (lower is better)
Translates to: YRHEPPHTPLVSPMPVSSPVFHT*SLTPWL
Trigger: AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG...GCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR GCA 90 bp GCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGTAAGTCCTGCAGGCCCTTGGCATaGTTCCTGACAGCTCGCATC +
Preference number: 2 (lower is better)
Translates to: APLSHPHCLRRSGNHRKSCRPLA*FLTARI
Trigger: GATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCA...GGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR-3UTR CCA 90 bp ACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAATGCTCACTCACTCCATaGCTTAGAAAAGAACACGTC +
Preference number: 2 (lower is better)
Translates to: THHLYLLCPCQAAAGRWECSLTP*LRKEHV
Trigger: GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA...TTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR-3UTR CCA 90 bp ACGGTCTTGCTCAGCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATTCTGGCTTAGCAGCTaGTTCCAGACCTCCACCACG +
Preference number: 2 (lower is better)
Translates to: TVLLSSSISSSLSKTFRKFWLSS*FQTSTT
Trigger: CGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAA...TTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR-3UTR TCA 90 bp CCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGTAAGTCCAGTCCTTGGCATGCTTCCTaGCAGCTCGCATCCACCCTT +
Preference number: 2 (lower is better)
Translates to: PLSHPHCLRRSGNHRKSSPWHAS*QLASTL
Trigger: AAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGG...ACTGGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR-3UTR TCA 90 bp GCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGTAAGTCCTCCCAAAGACCTTGGTaGCATCGTAGCCATGGCTGT +
Preference number: 2 (lower is better)
Translates to: APLSHPHCLRRSGNHRKSSQRPW*HRSHGC
Trigger: ACAGCCATGGCTACGATGTCACCAAGGTCTTTGGGA...GGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR-3UTR CCA 90 bp GCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGTAAGTCCGCCATGGCTGTTCCATaGAGTGACATAGCCCAGTAC +
Preference number: 2 (lower is better)
Translates to: APLSHPHCLRRSGNHRKSAMAVP*SDIAQY
Trigger: GTACTGGGCTATGTCACTCCATGGAACAGCCATGGC...GGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR CCA 72 bp GCAGGCGGGATGACCAGGAGGGCCAGCAGCCGGGCCTaGTGCAGAGCCTCGGCCAAGTGGGTGAGCATGTGG +
Preference number: 3 (lower is better)
Translates to: AGGMTRRASSRA*CRASAKWVSMW
Trigger: CCACATGCTCACCCACTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCTGGCCCTCCTGGTCATCCCGCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR TCA 72 bp CCCACGGGTCCTGCCGTTGCCCCTCACCATGCTCCCTaGTGTGTCCAGGCTGGCCTGGGGGTCGTGCTACCT +
Preference number: 3 (lower is better)
Translates to: PTGPAVAPHHAP*CVQAGLGVVLP
Trigger: AGGTAGCACGACCCCCAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR CCA 72 bp AGGGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTaGGGACGTCTGGGTGGCTCTCTGCAGGTGACACAC +
Preference number: 3 (lower is better)
Translates to: RAAPAPLPCWTR*GRLGGSLQVTH
Trigger: GTGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR CCA 72 bp GCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTaGGTGCCTTGGGTCCGACCCAGGACCCCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: ASLTSRRRLSQV*VPWVRPRTPSP
Trigger: TGGGGAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
3UTR-3UTR CAA 90 bp AGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTGCCCACCACGGGTCCTGCCGTaGCCCCTCACCATGCTCCCT +
Preference number: 3 (lower is better)
Translates to: RPHHASSPPAGDVLTPCPPRVLP*PLTMLP
Trigger: AGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTGG...TGGGCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR TCA 72 bp GGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTaGCGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGC +
Preference number: 3 (lower is better)
Translates to: GCTCTVAARRPP*RPGGGFLKCGC
Trigger: GCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
3UTR GCA 72 bp CCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTaGCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCT +
Preference number: 3 (lower is better)
Translates to: PLSPFLGQPLHP*RAGLGGDVWVA
Trigger: AGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
3UTR GCA 72 bp GATATGGCCCACGGGTCCTGCCGTTGCCCCTCACCATaGTCCCTGATGTGTCCAGGCTGGCCTGGGGGTCGT +
Preference number: 3 (lower is better)
Translates to: DMAHGSCRCPSP*SLMCPGWPGGR
Trigger: ACGACCCCCAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTGGGCCATATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR GCA 72 bp CCATCCAGCACGGGGGCCAGCTGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGGTCGGTCCCGGGGGTG +
Preference number: 3 (lower is better)
Translates to: PSSTGASCSNSL*VNMPSWSVPGV
Trigger: CACCCCCGGGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR CCA 72 bp ACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTaGCTCTCTGCAGGTGACACACGTGCTGTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: TLAVLDSVGTSG*LSAGDTRAVAG
Trigger: GCCAGCCACAGCACGTGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR CCA 72 bp CCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTaGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAG +
Preference number: 3 (lower is better)
Translates to: PISRAAPAPLPC*TRWGRLGGSLQ
Trigger: CTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR TCA 72 bp CTGGCCTGGGGGTCGTGCTACCTGAGGCGGCAGAGCTaGGCCAAGGTCCAGGACCAGTTTCAAGAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: LAWGSCYLRRQS*AKVQDQFQEGG
Trigger: CCCACCCTCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAGGTAGCACGACCCCCAGGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR TCA 72 bp CTGATGTGTCCAGGCTGGCCTGGGGGTCGTGCTACCTaGGGCGGCAGAGCTGAGCCAAGGTCCAGGACCAGT +
Preference number: 3 (lower is better)
Translates to: LMCPGWPGGRAT*GGRAEPRSRTS
Trigger: ACTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAGGTAGCACGACCCCCAGGCCAGCCTGGACACATCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR GCA 72 bp GGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTaGAGCAGACCCGTCACAGCAAACGGAGTGGAGGCC +
Preference number: 3 (lower is better)
Translates to: GVTWCPGPPTED*SRPVTANGVEA
Trigger: GGCCTCCACTCCGTTTGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR GCA 72 bp CAGCCACATGTCCTCTGCCCCACCCCTCGCTGGAAATaGCTGTCCCGATATGGCCCACGGGTCCTGCCGTTG +
Preference number: 3 (lower is better)
Translates to: QPHVLCPTPRWK*LSRYGPRVLPL
Trigger: CAACGGCAGGACCCGTGGGCCATATCGGGACAGGCATTTCCAGCGAGGGGTGGGGCAGAGGACATGTGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR GCA 72 bp AATGCCTGTCCCGATATGGCCCACGGGTCCTGCCGTTaGCCCTCACCATGCTCCCTGATGTGTCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: NACPDMAHGSCR*PSPCSLMCPGW
Trigger: CCAGCCTGGACACATCAGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTGGGCCATATCGGGACAGGCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR CCA 72 bp CAGAGCTGTCCCTGCGAGGGCCCTCGAATCCAGGAGTaGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACC +
Preference number: 3 (lower is better)
Translates to: QSCPCEGPRIQE*ASPGWFQSFQT
Trigger: GGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTCGCAGGGACAGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR CCA 72 bp TATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTaGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAG +
Preference number: 3 (lower is better)
Translates to: YLLCPCQAAAGR*ERLHLHCGSSQ
Trigger: CTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
3UTR-3UTR CAA 90 bp CGAGGCACTATGTGCAGGCCCTTGGCATGCTTCCTGACAGCTCGCATCCACCCTGTCTGTCCCGGGCCTTaGCCGAGCAGTAGCTGCGAT +
Preference number: 3 (lower is better)
Translates to: RGTMCRPLACFLTARIHPVCPGP*PSSSCD
Trigger: ATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGAC...AGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR TCA 72 bp AGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTaGGGACTGCAGCAGACCCGTCACAGCAAACGGAGT +
Preference number: 3 (lower is better)
Translates to: RMGSHMVPRTPD*GLQQTRHSKRS
Trigger: ACTCCGTTTGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR TCA 72 bp CCCACTGCGGCTCTTCTTGTACTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACACCATCCGGGGCCTGTG +
Preference number: 3 (lower is better)
Translates to: PTAALLVLEEVL*GLAVPHHPGPV
Trigger: CACAGGCCCCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528521.1
3UTR GCA 72 bp GCTGGAAATGCCTGTCCCGATATGGCCCACGGGTCCTaGCGTTGCCCCTCACCATGCTCCCTGATGTGTCCA +
Preference number: 3 (lower is better)
Translates to: AGNACPDMAHGS*RCPSPCSLMCP
Trigger: TGGACACATCAGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTGGGCCATATCGGGACAGGCATTTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR GCA 72 bp GGCATGAACCGCCGCACACACCACTTGTATCTCCTATaGCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGG +
Preference number: 3 (lower is better)
Translates to: GMNRRTHHLYLL*PCQAAAGRWER
Trigger: CCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
3UTR GCA 72 bp TGCCTCCCACTGCGGCTCTTCTTGTACTCGAAGAAGTaGTCTGAGGCCTGGCTGTCCCACACCATCCGGGGC +
Preference number: 3 (lower is better)
Translates to: CLPLRLFLYSKK*SEAWLSHTIRG
Trigger: GCCCCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528521.1
3UTR TCA 72 bp CCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTaGCCCCCTGCCCACTGCGCCCTAACATTACTGACT +
Preference number: 3 (lower is better)
Translates to: PTMLPHHRLEMS*PPAHCALTLLT
Trigger: AGTCAGTAATGTTAGGGCGCAGTGGGCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR TCA 72 bp CTCGCATCCACCCTTGGTCCACGTCGTGGAGGCCCGTaGCCTCAAACATCTCACGGCCACGTCTCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: LASTLGPRRGGP*PQTSHGHVSSA
Trigger: AGCTGAAGAGACGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGGATGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR GCA 72 bp AACAGGAGCCGAGGCACTATGTGCAGGCCCTTGGCATaGTTCCTGACAGCTCGCATCCACCCTTGGTCCACG +
Preference number: 3 (lower is better)
Translates to: NRSRGTMCRPLA*FLTARIHPWST
Trigger: CGTGGACCAAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCTCCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR CCA 72 bp TTCCTGACAGCTCGCATCCACCCTTGGTCCACGTCGTaGAGGCCCGTGACCTCAAACATCTCACGGCCACGT +
Preference number: 3 (lower is better)
Translates to: FLTARIHPWSTS*RPVTSNISRPR
Trigger: ACGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCTGTCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR GCA 72 bp GTCATGAGGCTGAAACCATCCAGCACGGGGGCCAGCTaGTCAAACTCCTTGTGCGTGAACATGCCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: VMRLKPSSTGAS*SNSLCVNMPSW
Trigger: CCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGATGGTTTCAGCCTCATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR GCA 72 bp GCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTaGCCACTGCGCCCTAACATTACTGACTCTAAACCA +
Preference number: 3 (lower is better)
Translates to: ASSPPAGDVLTP*PLRPNITDSKP
Trigger: TGGTTTAGAGTCAGTAATGTTAGGGCGCAGTGGGCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR CCA 72 bp ATGTGGATGAGGCCCACGCGCTTCTGGCTTAGCAGCTaGTTCCAGACCTCCACCACGAAGCCATCGAAATGC +
Preference number: 3 (lower is better)
Translates to: MWMRPTRFWLSS*FQTSTTKPSKC
Trigger: GCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGCGTGGGCCTCATCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
3UTR-3UTR CAA 90 bp CACCCTCACTCCAACAGAAGCCACAGGACCCCCGAGAACAACTTGAATGTTAGCGAGGGCCACCAGGCCTaGGCTCATGATGCCTCCAAA +
Preference number: 3 (lower is better)
Translates to: HPHSNRSHRTPENNLNVSEGHQA*AHDASK
Trigger: TTTGGAGGCATCATGAGCCAAGGCCTGGTGGCCCTC...GCTAACATTCAAGTTGTTCTCGGGGGTCCTGTGGCTTCTGTTGGAGTGAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR TCA 72 bp CTCACGGCCACGTCTCTTCAGCTGCAGCCAGACGGGTaGGATCTGTGTGAACTTGCTCCCAAAGACCTTGGT +
Preference number: 3 (lower is better)
Translates to: LTATSLQLQPDG*DLCELAPKDLG
Trigger: ACCAAGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR CCA 72 bp TGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATaGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGC +
Preference number: 3 (lower is better)
Translates to: WRPVFHTCSLTP*LRKEHVHRGGR
Trigger: GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
3UTR CCA 72 bp CTGAGGACTGCAGCAGACCCGTCACAGCAAACGGAGTaGAGGCCTGTATTTCACACCTGCTCACTCACTCCA +
Preference number: 3 (lower is better)
Translates to: LRTAADPSQQTE*RPVFHTCSLTP
Trigger: TGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGACGGGTCTGCTGCAGTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR TCA 72 bp CCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCATaGACCGCCGCACACACCACTTGTATCTCCTATGCC +
Preference number: 3 (lower is better)
Translates to: PPRLSKVLGLQA*TAAHTTCISYA
Trigger: GGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
3UTR GCA 72 bp GTGACCTCAAACATCTCACGGCCACGTCTCTTCAGCTaGAGCCAGACGGGTGAGATCTGTGTGAACTTGCTC +
Preference number: 3 (lower is better)
Translates to: VTSNISRPRLFS*SQTGEICVNLL
Trigger: GAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTTGAGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR TCA 72 bp ACTCCAACAGAAGCCACAGGACCCCCGAGAACAACTTaGATGTTAGCGTCAGCACCTCTGGGGAGACAAGGT +
Preference number: 3 (lower is better)
Translates to: TPTEATGPPRTT*MLASAPLGRQG
Trigger: ACCTTGTCTCCCCAGAGGTGCTGACGCTAACATTCAAGTTGTTCTCGGGGGTCCTGTGGCTTCTGTTGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR-3UTR CAA 90 bp ATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATACTATGTGCAGGCCCTaGGCATGCTTCCTGACAGCT +
Preference number: 3 (lower is better)
Translates to: IEMLVLCHLDHGLAQLLYTMCRP*ACFLTA
Trigger: AGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGT...ATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
3UTR GCA 72 bp CGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTaGTCAGCTCCTCTATCTCATCCTCACTGTCTAAGA +
Preference number: 3 (lower is better)
Translates to: RNAGSLPPGPRS*SAPLSHPHCLR
Trigger: TCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
3UTR GCA 72 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTaGTCACTCACTCCATGGCTTAGAAAAGAACACGTC +
Preference number: 3 (lower is better)
Translates to: SQQTEWRPVFHT*SLTPWLRKEHV
Trigger: GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp AGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTCCCCGCCTGCCCAGCTaGCAGGAGGCAGCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: SPCTLAVLDSVGTSGWLSPRLPS*QEAASG
Trigger: TCCGCTGGCTGCCTCCTGTCAGCTGGGCAGGCGGGG...AGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCGCCAGGCTGTCCTGGTaGGGCAGGTACTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GSPCTLAVLDSVGTSGWLARLSW*GRYCGP
Trigger: GGGCCCACAGTACCTGCCCCACCAGGACAGCCTGGC...GAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp GCGAGGGCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCCCCCGCCTGCCCAGCTaGCAGGAGGCAGCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: ARALESRSGRVRDGSRASPRLPS*QEAASG
Trigger: TCCGCTGGCTGCCTCCTGTCAGCTGGGCAGGCGGGG...GGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTCGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp GGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCCCTGCACCCTTGCCGTaGTGGACTCGGTGGGGACGT +
Preference number: 4 (lower is better)
Translates to: GSPCTLAVLDSVGTSGWLPAPLP*WTRWGR
Trigger: ACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGG...GAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GCAGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCGGGAACGGCTGCACCTaGACTGTGGCAGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: AAGRWERLHLHCGSSQASGNGCT*TVAARR
Trigger: CCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCC...GGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGCCGTGCTGGACTCGGTaGGGACGTCTGGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GRWERLHLHCGSSQASLTPCWTR*GRLGGS
Trigger: AGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGG...CGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCGTGTCCAGGCTGGCCTaGGGGTCGTGCTACCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSPCTLAVLDSVGTSGWLVSRLA*GSCYLR
Trigger: CCTCAGGTAGCACGACCCCCAGGCCAGCCTGGACAC...GAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCGCCAGTGCTCCTGGGTaGGGTCGCGGCGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QAEAFSSVGALGPTQDPLASAPG*GRGGSG
Trigger: CCCAGAGCCGCCGCGACCCCACCCAGGAGCACTGGC...GAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR TCA 90 bp CCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCCTGAGGCGGCAGAGCTaGGCCAAGGTCCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: PLHPCRAGLGGDVWVALCLRRQS*AKVQDQ
Trigger: CTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAG...GCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp GTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGTCCAGGCTCGCAGGCCTCCCTaGCGTCCAGGCGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VGTAAPALWQLAGLPDVQARRPP*RPGGGF
Trigger: AAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAGC...CTGGACGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp TCGGTCCCGGGGGTGATGGCAGGCGGGATGACCAGGAGGGCCAGCAGCCGGGCCAGCCGAGGCACTATGTaGAGGCCCTTGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: SVPGVMAGGMTRRASSRASRGTM*RPLACF
Trigger: GAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCT...GGCCCGGCTGCTGGCCCTCCTGGTCATCCCGCCTGCCATCACCCCCGGGACCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR GCA 90 bp AGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTAGCAGCCGGGCCTGGTaGAGAGCCTCGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: SPCTLAVLDSVGTSGWLSSSRAW*RASAKW
Trigger: CCACTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCT...AGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTGACACACGTGCTGGAGGCAGCCAGCGGATaGCCGGGTGGGAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: CWTRWGRLGGSLQVTHVLEAASG*PGGRGS
Trigger: CGAGCCCCTCCCACCCGGGCATCCGCTGGCTGCCTC...CAGCACGTGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp GCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGAGAGGCAGCCAGCGGATaGCCGGGTGGGAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: ASLTSRRRLSQVWVPWVREAASG*PGGRGS
Trigger: CGAGCCCCTCCCACCCGGGCATCCGCTGGCTGCCTC...TCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CAGGCTGTCCTGGTGGGGCAGGTACTGTGGGCCCCGCCTGCCCAGCTGACAGGAGGGAACGGCTGCACCTaGACTGTGGCAGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: QAVLVGQVLWAPPAQLTGGNGCT*TVAARR
Trigger: CCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCC...TCCTGTCAGCTGGGCAGGCGGGGCCCACAGTACCTGCCCCACCAGGACAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CGTTGCCCCTCACCATGCTCCCTGATGTGTCCAGGCTGGCCTGGGGGTCGTGCTGCCAGCAGCCGGGCCTaGTGCAGAGCCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RCPSPCSLMCPGWPGGRAASSRA*CRASAK
Trigger: CTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCTGGC...AGCACGACCCCCAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGGGGCAACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp AGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCCAGGCTGTCCTGGTaGGGCAGGTACTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SPCTLAVLDSVGTSGWLSARLSW*GRYCGP
Trigger: GGGCCCACAGTACCTGCCCCACCAGGACAGCCTGGC...AGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGTGTCCAGGCTGGCCTaGGGGTCGTGCTACCTGAGG +
Preference number: 4 (lower is better)
Translates to: SRAVGTAAPALWQLAGLPVSRLA*GSCYLR
Trigger: CCTCAGGTAGCACGACCCCCAGGCCAGCCTGGACAC...AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCCCAGCTCCCGTCCTGTaGAGGAGACCCCACCATGCT +
Preference number: 4 (lower is better)
Translates to: GSPCTLAVLDSVGTSGWLPAPVL*RRPHHA
Trigger: AGCATGGTGGGGTCTCCTCCACAGGACGGGAGCTGG...GAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CAGGCTGTCCTGGTGGGGCAGGTACTGTGGGCCCCGCCTGCCCAGCTGACAGGAGGGGTGAGGGTTGTGTaGGGACCCTGGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: QAVLVGQVLWAPPAQLTGGVRVV*GPWPQG
Trigger: TCCCTGTGGCCAGGGTCCCCACACAACCCTCACCCC...TCCTGTCAGCTGGGCAGGCGGGGCCCACAGTACCTGCCCCACCAGGACAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp TGGTCGGTCCCGGGGGTGATGGCAGGCGGGATGACCAGGAGGGCCAGCAGCCGGCAAACTCCTTGTGCGTaGACATGCCCAGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: WSVPGVMAGGMTRRASSRQTPCA*TCPAGR
Trigger: CCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTG...CCGGCTGCTGGCCCTCCTGGTCATCCCGCCTGCCATCACCCCCGGGACCGACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR TCA 90 bp GCAGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: AAGRWERLHLHCGSSQASLEEVL*GLAVPH
Trigger: GTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAG...GGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR TCA 90 bp GGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGACCCCAGCCCAGAAAGGCCTaGGCCAGGCTGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLELSGCPPARTHPGQGPQPRKA*ARLSWW
Trigger: CCACCAGGACAGCCTGGCTCAGGCCTTTCTGGGCTG...GGGTCCCTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp GTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGTCCAGCTGAGGCGGCAGAGCTaGGCCAAGGTCCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: VGTAAPALWQLAGLPDVQLRRQS*AKVQDQ
Trigger: CTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAG...CTGGACGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR TCA 90 bp TCCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGCCCCAGCTCCCGTCCTaGGGCGGCAGAGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SSEPISRAAPAPLPCWTRPQLPS*GGRAEP
Trigger: TGGCTCAGCTCTGCCGCCTCAGGACGGGAGCTGGGG...CCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGACCCATGGCCCACGGGTCCTaGCGTTGCCCCTCACCATGC +
Preference number: 4 (lower is better)
Translates to: GLELSGCPPARTHPGQGPMAHGS*RCPSPC
Trigger: GCATGGTGAGGGGCAACGGCAGGACCCGTGGGCCAT...GGGTCCCTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGACATCCCATCCTGTGTaGCATCCCCACCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GRWERLHLHCGSSQASLTTSHPV*HPHPCL
Trigger: GAGGCAGGGGTGGGGATGCCACACAGGATGGGATGT...CGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GGTCCCGGGGGTGATGGCAGGCGGGATGACCAGGAGGGCCAGCAGCCGGGCCTGTCCCAAAGACCTTGGTaGCATCGTAGCCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPGGDGRRDDQEGQQPGLSQRPW*HRSHGC
Trigger: ACAGCCATGGCTACGATGTCACCAAGGTCTTTGGGA...CAGGCCCGGCTGCTGGCCCTCCTGGTCATCCCGCCTGCCATCACCCCCGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR TCA 90 bp AGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTCTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: SRAVGTAAPALWQLAGLPLEEVL*GLAVPH
Trigger: GTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAG...AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR TCA 90 bp CCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCAGCCCAGAAAGGCCTaGGCCAGGCTGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGGGFLKCGCLGSDPGPPQPRKA*ARLSWW
Trigger: CCACCAGGACAGCCTGGCTCAGGCCTTTCTGGGCTG...AGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp CCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGGTCGTGCTACCTaGGGCGGCAGAGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PLSPFLGQPLHPCRAGLGGGRAT*GGRAEP
Trigger: TGGCTCAGCTCTGCCGCCTCAGGTAGCACGACCCCC...ACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp CTCGCAGGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGCTCGCAGGCCTCCCTaGCGTCCAGGCGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LAGLPDVQAEAFSSVGALARRPP*RPGGGF
Trigger: AAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAGC...CAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR TCA 90 bp CTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGGCTCGCAGGCCTCCCTaGCGTCCAGGCGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LTSRRRLSQVWVPWVRPRARRPP*RPGGGF
Trigger: AAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAGC...CCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR TCA 90 bp GGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGACCCCCCTGGCCACAGGGATaGCGGTCAGTTCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GLELSGCPPARTHPGQGPPWPQG*RSVQVG
Trigger: CCCAACCTGAACTGACCGTCATCCCTGTGGCCAGGG...GGGTCCCTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GAGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCGGGGTCCAGAGGGCTaGATGTCAGGGAGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: EDGESHGAQDPRLRTAADRGPEG*MSGRPD
Trigger: GTCCGGCCTCCCTGACATGCAGCCCTCTGGACCCCG...GTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323578.13
CDS-3UTR GCA 90 bp GCAGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCGACGTGCCTCCCACTaGGGCTCTTCTTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: AAGRWERLHLHCGSSQASRRASH*GSSCTR
Trigger: TCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCG...GGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGTCCAGAGCTCCAGCCGCACCTaGAGGGACTTCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: VGTAAPALWQLAGLPDVQSSSRT*RDFRVG
Trigger: CCCAACCCTGAAGTCCCTGCAGGTGCGGCTGGAGCT...CTGGACGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp AGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTTGGGGAGTCACATGGTaGCCAGGACCCCCGACTGAG +
Preference number: 4 (lower is better)
Translates to: SPCTLAVLDSVGTSGWLSWGVTW*PGPPTE
Trigger: CTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCA...AGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp GCGAGGGCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCGGCGGTGGGAACGGCTaGACCTGCACTGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ARALESRSGRVRDGSRASGGGNG*TCTVAA
Trigger: AGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCC...GGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CCACCCTTGGTCCACGTCGTGGAGGCCCGTGACCTCAAACATCTCACGGCCACGCCGGCGCGCCCACTTTaGGGGAGGGAAACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PPLVHVVEARDLKHLTATPARPL*GRETEA
Trigger: GGCCTCAGTTTCCCTCCCGCAAAGTGGGCGCGCCGG...CGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR CCA 90 bp TCCTTGTGCGTGAACATGCCCAGCTGGTCGGTCCCGGGGGTGATGGCAGGCGGGGTGAACATGCCCAGCTaGTCGGTCCCGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: SLCVNMPSWSVPGVMAGGVNMPS*SVPGVM
Trigger: CATCACCCCCGGGACCGACCAGCTGGGCATGTTCAC...CCCGCCTGCCATCACCCCCGGGACCGACCAGCTGGGCATGTTCACGCACAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR CCA 90 bp GCAGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCGTGTCTGGATGTACCTaGCCCCGACAACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AAGRWERLHLHCGSSQASVSGCT*PRQQAH
Trigger: GTGAGCCTGTTGTCGGGGCCAGGTACATCCAGACAC...GGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGACCCGGATGGGGAGTCACATaGTGCCCAGGACCCCCGACT +
Preference number: 4 (lower is better)
Translates to: GLELSGCPPARTHPGQGPGWGVT*CPGPPT
Trigger: AGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCC...GGGTCCCTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GAGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCAGCGGATGCCCGGGTaGGAGGGGCTCGAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: EDGESHGAQDPRLRTAADQRMPG*EGLELS
Trigger: TGAGAGCTCGAGCCCCTCCCACCCGGGCATCCGCTG...GTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTGCCCAGGCCTCCCCAGAGCCTaGACACCGCTGCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPHHASSPPAGDVLTPCPGLPRA*TPLHGR
Trigger: CCTGCCATGCAGCGGTGTCCAGGCTCTGGGGAGGCC...TGGGCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACAGGCCTCCCCAGAGCCTaGACACCGCTGCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: GVTWCPGPPTEDCSRPVTGLPRA*TPLHGR
Trigger: CCTGCCATGCAGCGGTGTCCAGGCTCTGGGGAGGCC...TGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCAAGTGTGGGTGCCTTaGGTCCGACCCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: PGGGFLKCGCLGSDPGPPQVWVP*VRPRTP
Trigger: GGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTG...AGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGAGGCTTTCTCAAGTGTaGGTGCCTTGGGTCCGACCC +
Preference number: 4 (lower is better)
Translates to: GRWERLHLHCGSSQASLTRLSQV*VPWVRP
Trigger: GGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCT...CGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp TGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTGCTGCACCTGCACTGTaGCAGCTCGCAGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: CTLAVLDSVGTSGWLSAGAAPAL*QLAGLP
Trigger: AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGC...ACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGGCAGCAGCAGGGCGGTaGGAACGGCTGCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: LTSRRRLSQVWVPWVRPRAAAGR*ERLHLH
Trigger: GTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGCTGC...CCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGAGCAGCAGCAGGGCGGTaGGAACGGCTGCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: ASLTSRRRLSQVWVPWVRAAAGR*ERLHLH
Trigger: GTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGCTGC...TCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp AGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTCCCAAGGGCAGGACCTaGGCCACTATTGCTGACCAC +
Preference number: 4 (lower is better)
Translates to: SRAVGTAAPALWQLAGLPPKGRT*ATIADH
Trigger: GTGGTCAGCAATAGTGGCCCAGGTCCTGCCCTTGGG...AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR TCA 90 bp CTGCCCCACCCCTCGCTGGAAATGCCTGTCCCGATATGGCCCACGGGTCCTGCCCTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LPHPSLEMPVPIWPTGPALEEVL*GLAVPH
Trigger: GTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAG...GGCAGGACCCGTGGGCCATATCGGGACAGGCATTTCCAGCGAGGGGTGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGGTGGCTCTCTGCAGGTaGCACACGTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLPDVQAEAFSSVGALGPVALCR*HTCCGW
Trigger: CCAGCCACAGCACGTGTGTCACCTGCAGAGAGCCAC...CGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp CAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCCCTCACCATGCTCCCTaGTGTGTCCAGGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QAEAFSSVGALGPTQDPLPHHAP*CVQAGL
Trigger: CAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGG...GAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp TGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTCCTCACCATGCTCCCTaGTGTGTCCAGGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: CTLAVLDSVGTSGWLSAGPHHAP*CVQAGL
Trigger: CAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGG...ACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp AGGAGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTGCTGTGGGACCCAGTGGTaGGGAGGGGAGTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: RRPHHASSPPAGDVLTPCCGTQW*GGESSR
Trigger: CCGTGAGGACTCCCCTCCTCACCACTGGGTCCCACA...GCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGAGCTCCAGCCGCACCTaGAGGGACTTCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GLPDVQAEAFSSVGALGPSSSRT*RDFRVG
Trigger: CCCAACCCTGAAGTCCCTGCAGGTGCGGCTGGAGCT...CGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGAGGCAGCCAGCGGATaGCCGGGTGGGAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GFHHVAQRSSRHGFPKYWEAASG*PGGRGS
Trigger: CGAGCCCCTCCCACCCGGGCATCCGCTGGCTGCCTC...CCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp ATGGTGACGAGGGGCAGGGGAACGAGGGCCACCAGGCCTTGGCTCATGATGCCTGGGCAGAGCTGTCCCTaGGAGGGCCCTCGAATCCAG +
Preference number: 4 (lower is better)
Translates to: MVTRGRGTRATRPWLMMPGQSCP*EGPRIQ
Trigger: CTGGATTCGAGGGCCCTCGCAGGGACAGCTCTGCCC...AGGCATCATGAGCCAAGGCCTGGTGGCCCTCGTTCCCCTGCCCCTCGTCACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TCCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGGGGCAGAGCTGTCCCTaGGAGGGCCCTCGAATCCAG +
Preference number: 4 (lower is better)
Translates to: SSEPISRAAPAPLPCWTRGQSCP*EGPRIQ
Trigger: CTGGATTCGAGGGCCCTCGCAGGGACAGCTCTGCCC...CCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp GCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCTGCACCCTTGCCGTaGTGGACTCGGTGGGGACGT +
Preference number: 4 (lower is better)
Translates to: ASLTSRRRLSQVWVPWVRPAPLP*WTRWGR
Trigger: ACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGG...TCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACACCTGCACCCTTGCCGTaGTGGACTCGGTGGGGACGT +
Preference number: 4 (lower is better)
Translates to: GVTWCPGPPTEDCSRPVTPAPLP*WTRWGR
Trigger: ACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGG...TGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CTCGCAGGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGCCTGCACCCTTGCCGTaGTGGACTCGGTGGGGACGT +
Preference number: 4 (lower is better)
Translates to: LAGLPDVQAEAFSSVGALPAPLP*WTRWGR
Trigger: ACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGG...CAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp CTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGCACGGGTCCTGCCGTTaGCCCTCACCATGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LTSRRRLSQVWVPWVRPRHGSCR*PSPCSL
Trigger: CAGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTG...CCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGACCCACCTATGCCCTCTACTaGCCACCTCAGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GLELSGCPPARTHPGQGPTYALY*PPQPCG
Trigger: CCCACAGGGCTGAGGTGGGCAGTAGAGGGCATAGGT...GGGTCCCTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GCAGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCTTTCTCAAGTGTGGGTaGCTTGGGTCCGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAGRWERLHLHCGSSQASFLKCG*LGSDPG
Trigger: TCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAA...GGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp CCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGAACGGCTGCACCTaGACTGTGGCAGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: PLSPFLGQPLHPCRAGLGGNGCT*TVAARR
Trigger: CCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCC...ACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGAGGCGGTGGGAACGGCTaGACCTGCACTGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ASLTSRRRLSQVWVPWVRGGGNG*TCTVAA
Trigger: AGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCC...TCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGTCCAGGGGGTTTCACCATGTTaGCCAGCGTTCCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: VGTAAPALWQLAGLPDVQGVSPC*PAFLPP
Trigger: TGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC...CTGGACGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CTGCTCAAACTCCTTGTGCGTGAACATGCCCAGCTGGTCGGTCCCGGGGGTGATGCCAGCAGCCGGGCCTaGTGCAGAGCCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LLKLLVREHAQLVGPGGDASSRA*CRASAK
Trigger: CTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCTGGC...ATCACCCCCGGGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR CCA 90 bp CAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCGTGAACATGCCCAGCTaGTCGGTCCCGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: QAEAFSSVGALGPTQDPLVNMPS*SVPGVM
Trigger: CATCACCCCCGGGACCGACCAGCTGGGCATGTTCAC...GAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTTTCGGGTCCAGGACCTaGACGCAGGCTCGAACCCAG +
Preference number: 4 (lower is better)
Translates to: CTLAVLDSVGTSGWLSAGFGSRT*TQARTQ
Trigger: CTGGGTTCGAGCCTGCGTCCAGGTCCTGGACCCGAA...ACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGTGGTCCTTCAGTGTCTaGATGTACCTGGCCCCGACA +
Preference number: 4 (lower is better)
Translates to: GRWERLHLHCGSSQASLTWSFSV*MYLAPT
Trigger: TGTCGGGGCCAGGTACATCCAGACACTGAAGGACCA...CGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000534207.5
CDS-3UTR CCA 90 bp AGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTTGGGCGAGTCCGGGATaGTTCCAGAGCTTCCAAACC +
Preference number: 4 (lower is better)
Translates to: SRAVGTAAPALWQLAGLPWASPG*FQSFQT
Trigger: GGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCA...AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CTCGCAGGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGCTGGCCAGGTGGGTaGCAGGTATGTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LAGLPDVQAEAFSSVGALGWPGG*QVCGGG
Trigger: TCCACCCCCACATACCTGCCACCCACCTGGCCAGCC...CAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GAGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACGCACCCTTGCCGTGCTaGACTCGGTGGGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: EDGESHGAQDPRLRTAADAPLPC*TRWGRL
Trigger: CAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGC...GTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTCTGATGTGTCCAGGCTaGCCTGGGGGTCGTGCTACC +
Preference number: 4 (lower is better)
Translates to: CTLAVLDSVGTSGWLSAGLMCPG*PGGRAT
Trigger: GGTAGCACGACCCCCAGGCCAGCCTGGACACATCAG...ACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp AGGAGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTGCCCCACCTCAGCCCTGTaGGACCCAGTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RRPHHASSPPAGDVLTPCPTSAL*DPVVRR
Trigger: CCTCCTCACCACTGGGTCCCACAGGGCTGAGGTGGG...GCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GAGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCCACCTCAGCCCTGTaGGACCCAGTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EDGESHGAQDPRLRTAADPTSAL*DPVVRR
Trigger: CCTCCTCACCACTGGGTCCCACAGGGCTGAGGTGGG...GTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTGACACACGTGCTGCAAGTGTGGGTGCCTTaGGTCCGACCCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: CWTRWGRLGGSLQVTHVLQVWVP*VRPRTP
Trigger: GGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTG...CAGCACGTGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGGCTGCACCTGCACTGTaGCAGCTCGCAGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LTSRRRLSQVWVPWVRPRAAPAL*QLAGLP
Trigger: AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGC...CCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CTCGCAGGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGCTGCACCTGCACTGTaGCAGCTCGCAGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LAGLPDVQAEAFSSVGALAAPAL*QLAGLP
Trigger: AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGC...CAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR TCA 90 bp CAGGCTGTCCTGGTGGGGCAGGTACTGTGGGCCCCGCCTGCCCAGCTGACAGGACCACACTCTCAGCTTTaGGGTCCGTCACCACCAAAC +
Preference number: 4 (lower is better)
Translates to: QAVLVGQVLWAPPAQLTGPHSQL*GPSPPN
Trigger: GTTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGG...TCCTGTCAGCTGGGCAGGCGGGGCCCACAGTACCTGCCCCACCAGGACAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGCGGGTGAGATCTGTGTaGACTTGCTCCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: GRWERLHLHCGSSQASLTRVRSV*TCSQRP
Trigger: AGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCG...CGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACACGTCGTGGAGGCCCGTaGCCTCAAACATCTCACGGC +
Preference number: 4 (lower is better)
Translates to: GVTWCPGPPTEDCSRPVTRRGGP*PQTSHG
Trigger: GCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACG...TGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp CCACCCTTGGTCCACGTCGTGGAGGCCCGTGACCTCAAACATCTCACGGCCACGCGTCGTGGAGGCCCGTaGCCTCAAACATCTCACGGC +
Preference number: 4 (lower is better)
Translates to: PPLVHVVEARDLKHLTATRRGGP*PQTSHG
Trigger: GCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACG...CGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR TCA 90 bp GTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGTCCAGCCTTGGCATGCTTCCTaGCAGCTCGCATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: VGTAAPALWQLAGLPDVQPWHAS*QLASTL
Trigger: AAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGG...CTGGACGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp TGGGAGGGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGCTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: WEGLELSGCPPARTHPGQLEEVL*GLAVPH
Trigger: GTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAG...CTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCCCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp GTTAGCGTCAGCACCTCTGGGGAGACAAGGTCAGTGCCCCAAAGCCAGTGGCAGGCTCGCAGGCCTCCCTaGCGTCCAGGCGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VSVSTSGETRSVPQSQWQARRPP*RPGGGF
Trigger: AAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAGC...CTGCCACTGGCTTTGGGGCACTGACCTTGTCTCCCCAGAGGTGCTGACGCTAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGCCCCCGAGAACAACTTaGATGTTAGCGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: GRWERLHLHCGSSQASLTPPRTT*MLASAP
Trigger: AGGTGCTGACGCTAACATTCAAGTTGTTCTCGGGGG...CGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGACCCCTGGGCCACTATTGCTaGCCACGTCCTGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: GLELSGCPPARTHPGQGPLGHYC*PRPVTP
Trigger: AGGAGTGACAGGACGTGGTCAGCAATAGTGGCCCAG...GGGTCCCTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR TCA 90 bp GCAGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCACAGTGGCAGCCTCGTaGCTCTGTCCTGTTCTAACT +
Preference number: 4 (lower is better)
Translates to: AAGRWERLHLHCGSSQASTVAAS*LCPVLT
Trigger: AGTTAGAACAGGACAGAGTCACGAGGCTGCCACTGT...GGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR TCA 90 bp GCAGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCTTGCACCGGCTTATCTaGAAACTGACTCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: AAGRWERLHLHCGSSQASLHRLI*KLTLGG
Trigger: GCCACCCAGAGTCAGTTTTCAGATAAGCCGGTGCAA...GGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454838.6
CDS-3UTR TCA 90 bp GAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGCCCCAGCTCCCGTCCTaGGGCGGCAGAGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EPPHTPLVSPMPVSSSSRPQLPS*GGRAEP
Trigger: TGGCTCAGCTCTGCCGCCTCAGGACGGGAGCTGGGG...CCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGACCCAGCCGAGGCACTATGTaGAGGCCCTTGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: GLELSGCPPARTHPGQGPSRGTM*RPLACF
Trigger: GAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCT...GGGTCCCTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGCTAGCAGCCGGGCCTGGTaGAGAGCCTCGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: PLVSPMPVSSSSRAVGTASSRAW*RASAKW
Trigger: CCACTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCT...AGCCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSPCTLAVLDSVGTSGWLCSNSL*VNMPSW
Trigger: CCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCA...GAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCAGCACGGGGGCCAGCTaGTCAAACTCCTTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: QAEAFSSVGALGPTQDPLSTGAS*SNSLCV
Trigger: CACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCT...GAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GCAGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCTTGTACTCGAAGAAGTaGTCTGAGGCCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: AAGRWERLHLHCGSSQASLYSKK*SEAWLS
Trigger: GGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAA...GGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GAGGGCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAATGGCCCACGGGTCCTaGCGTTGCCCCTCACCATGC +
Preference number: 4 (lower is better)
Translates to: EGPRIQEWASPGWFQSFQMAHGS*RCPSPC
Trigger: GCATGGTGAGGGGCAACGGCAGGACCCGTGGGCCAT...TTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TGGGAGGGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGACCTATGCCCTCTACTaGCCACCTCAGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: WEGLELSGCPPARTHPGQTYALY*PPQPCG
Trigger: CCCACAGGGCTGAGGTGGGCAGTAGAGGGCATAGGT...CTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCCCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CAGGCTGTCCTGGTGGGGCAGGTACTGTGGGCCCCGCCTGCCCAGCTGACAGGATTTCTCAAGTGTGGGTaGCTTGGGTCCGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: QAVLVGQVLWAPPAQLTGFLKCG*LGSDPG
Trigger: TCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAA...TCCTGTCAGCTGGGCAGGCGGGGCCCACAGTACCTGCCCCACCAGGACAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp GAGGGCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAGGGAACGGCTGCACCTaGACTGTGGCAGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: EGPRIQEWASPGWFQSFQGNGCT*TVAARR
Trigger: CCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCC...TTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp GCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACCCGGCGGTGGGAACGGCTaGACCTGCACTGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALESRSGRVRDGSRASKPGGGNG*TCTVAA
Trigger: AGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCC...GGGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp GCGAGGGCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCGGGGTTTCACCATGTTaGCCAGCGTTCCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: ARALESRSGRVRDGSRASGVSPC*PAFLPP
Trigger: TGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC...GGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCCAAGATCGCGCCATTaGGCTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: PGGGFLKCGCLGSDPGPPPRSRH*APAWAT
Trigger: TGTTGCCCAGGCTGGAGCGCAATGGCGCGATCTTGG...AGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454838.6
CDS-3UTR GCA 90 bp CCACCCTTGGTCCACGTCGTGGAGGCCCGTGACCTCAAACATCTCACGGCCACGCTGGGTGGCAGAGGTTaGGGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: PPLVHVVEARDLKHLTATLGGRG*GEPRSR
Trigger: GCGCGATCTTGGCTCACCGCAACCTCTGCCACCCAG...CGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR CCA 90 bp CCCTTGGCATGCTTCCTGACAGCTCGCATCCACCCTTGGTCCACGTCGTGGAGGGCTCGCATCCACCCTTaGTCCACGTCGTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PLACFLTARIHPWSTSWRARIHP*STSWRP
Trigger: GGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGC...CCTCCACGACGTGGACCAAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR CCA 90 bp TGGGAGGGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGAGGCCCACGCGCTTCTaGCTTAGCAGCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: WEGLELSGCPPARTHPGQRPTRF*LSSWFQ
Trigger: CTGGAACCAGCTGCTAAGCCAGAAGCGCGTGGGCCT...CTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCCCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCAGGCCCACGCGCTTCTaGCTTAGCAGCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RPGGGFLKCGCLGSDPGPRPTRF*LSSWFQ
Trigger: CTGGAACCAGCTGCTAAGCCAGAAGCGCGTGGGCCT...GGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGACCCAAGTGGGTGAGCATGTaGATGAGGCCCACGCGCTTC +
Preference number: 4 (lower is better)
Translates to: GLELSGCPPARTHPGQGPKWVSM*MRPTRF
Trigger: GAAGCGCGTGGGCCTCATCCACATGCTCACCCACTT...GGGTCCCTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCGCCAGCAGCCGGGCCTaGTGCAGAGCCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRASSRA*CRASAK
Trigger: CTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCTGGC...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGTCCAGGTGTCTGGATGTACCTaGCCCCGACAACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VGTAAPALWQLAGLPDVQVSGCT*PRQQAH
Trigger: GTGAGCCTGTTGTCGGGGCCAGGTACATCCAGACAC...CTGGACGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CGTTGCCCCTCACCATGCTCCCTGATGTGTCCAGGCTGGCCTGGGGGTCGTGCTAAGTGCTCTGAGGCCTaGCTGTCCCACACCATCCGG +
Preference number: 4 (lower is better)
Translates to: RCPSPCSLMCPGWPGGRAKCSEA*LSHTIR
Trigger: CCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTT...AGCACGACCCCCAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGGGGCAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCAAGTGCTCTGAGGCCTaGCTGTCCCACACCATCCGG +
Preference number: 4 (lower is better)
Translates to: QAEAFSSVGALGPTQDPLKCSEA*LSHTIR
Trigger: CCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTT...GAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp TGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTGACACACGTGCTGGGATGGGGAGTCACATaGTGCCCAGGACCCCCGACT +
Preference number: 4 (lower is better)
Translates to: CWTRWGRLGGSLQVTHVLGWGVT*CPGPPT
Trigger: AGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCC...CAGCACGTGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGCTCAGCGGATGCCCGGGTaGGAGGGGCTCGAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PLVSPMPVSSSSRAVGTAQRMPG*EGLELS
Trigger: TGAGAGCTCGAGCCCCTCCCACCCGGGCATCCGCTG...AGCCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp ACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGTGGGGCAGGTACTGTaGGCCCCGCCTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPLVSPMPVSSSSRAVGTVGQVL*APPAQL
Trigger: CAGCTGGGCAGGCGGGGCCCACAGTACCTGCCCCAC...CGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGACCCTGGGCGAGTCCGGGATaGTTCCAGAGCTTCCAAACC +
Preference number: 4 (lower is better)
Translates to: GLELSGCPPARTHPGQGPWASPG*FQSFQT
Trigger: GGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCA...GGGTCCCTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGAGGGTGGGCCAGGCTCCTCCGTGCTGGACTCGGTaGGGACGTCTGGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GRAEPRSRTSFKRVGQAPPCWTR*GRLGGS
Trigger: AGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGG...AGGAGCCTGGCCCACCCTCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp TGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTGACACACGTGCTGCTGATGTGTCCAGGCTaGCCTGGGGGTCGTGCTACC +
Preference number: 4 (lower is better)
Translates to: CWTRWGRLGGSLQVTHVLLMCPG*PGGRAT
Trigger: GGTAGCACGACCCCCAGGCCAGCCTGGACACATCAG...CAGCACGTGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp AGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTTGCCCCACCCCTCGCTaGAAATGCCTGTCCCGATAT +
Preference number: 4 (lower is better)
Translates to: SPCTLAVLDSVGTSGWLSCPTPR*KCLSRY
Trigger: ATATCGGGACAGGCATTTCCAGCGAGGGGTGGGGCA...AGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGAGGGTGGGCCAGGCTCCTCAAGTGTGGGTGCCTTaGGTCCGACCCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: GRAEPRSRTSFKRVGQAPQVWVP*VRPRTP
Trigger: GGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTG...AGGAGCCTGGCCCACCCTCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGCTGCAGCAGCAGGGCGGTaGGAACGGCTGCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: PLVSPMPVSSSSRAVGTAAAAGR*ERLHLH
Trigger: GTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGCTGC...AGCCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACCCGGGTCGCGGCGGCTCTaGGCGACTCCTCATTTGCAG +
Preference number: 4 (lower is better)
Translates to: ALESRSGRVRDGSRASKPGSRRL*ATPHLQ
Trigger: CTGCAAATGAGGAGTCGCCCAGAGCCGCCGCGACCC...GGGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449825.5
3UTR CAA 72 bp AAACCATCCAGCACGGGGGCCAGCTGCTCAAACTCCTaGTGCGTGAACATGCCCAGCTGGTCGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: KPSSTGASCSNS*CVNMPSWSVPG
Trigger: CCCCGGGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGATGGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR TCA 90 bp GCGAGGGCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCTTTGACAGGGTAGTGTaGACAGGGCTGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ARALESRSGRVRDGSRASFDRVV*TGLQAR
Trigger: CCTGGCCTGCAGCCCTGTTCACACTACCCTGTCAAA...GGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp CTGCCCCACCCCTCGCTGGAAATGCCTGTCCCGATATGGCCCACGGGTCCTGCCCCACACTCTCAGCTTTaGGGTCCGTCACCACCAAAC +
Preference number: 4 (lower is better)
Translates to: LPHPSLEMPVPIWPTGPAPHSQL*GPSPPN
Trigger: GTTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGG...GGCAGGACCCGTGGGCCATATCGGGACAGGCATTTCCAGCGAGGGGTGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACACCCCACGGCATTCTaGGTGAGGGACGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: DGVSPCCPAFLPPRLSKVHPTAF*VRDAQA
Trigger: GGCCTGGGCGTCCCTCACTCAGAATGCCGTGGGGTG...TACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp AACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGGCTCGCAGGCCTCCCTaGCGTCCAGGCGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: NRRTHHLYLLCPCQAAAGARRPP*RPGGGF
Trigger: AAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAGC...CCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR TCA 90 bp ATGGTGACGAGGGGCAGGGGAACGAGGGCCACCAGGCCTTGGCTCATGATGCCTCCCATCTCAGCCTCCTaGGTAGCCAGGAGTACAGGC +
Preference number: 4 (lower is better)
Translates to: MVTRGRGTRATRPWLMMPPISAS*VARSTG
Trigger: GCCTGTACTCCTGGCTACTCAGGAGGCTGAGATGGG...AGGCATCATGAGCCAAGGCCTGGTGGCCCTCGTTCCCCTGCCCCTCGTCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCACGGGGTCCAGAGGGCTaGATGTCAGGGAGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAARGPEG*MSGRPD
Trigger: GTCCGGCCTCCCTGACATGCAGCCCTCTGGACCCCG...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000528581.5
CDS-3UTR GCA 90 bp TGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTTGCAGGCCCTTGGCATaGTTCCTGACAGCTCGCATC +
Preference number: 4 (lower is better)
Translates to: CTLAVLDSVGTSGWLSAGCRPLA*FLTARI
Trigger: GATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCA...ACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCACAGCCCCTGCACCCTTaGCGTGCTGGACTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAAQPLHP*RAGLGG
Trigger: CCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTG...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp ACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACCAGCCCCTGCACCCTTaGCGTGCTGGACTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: TGFHHVAQRSSRHGFPKYQPLHP*RAGLGG
Trigger: CCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTG...GTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp ACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCATGGCCCACGGGTCCTaGCGTTGCCCCTCACCATGC +
Preference number: 4 (lower is better)
Translates to: TAAHTTCISYARVKQQQGMAHGS*RCPSPC
Trigger: GCATGGTGAGGGGCAACGGCAGGACCCGTGGGCCAT...GCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GTTAGCGTCAGCACCTCTGGGGAGACAAGGTCAGTGCCCCAAAGCCAGTGGCAGGGGAACGGCTGCACCTaGACTGTGGCAGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: VSVSTSGETRSVPQSQWQGNGCT*TVAARR
Trigger: CCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCC...CTGCCACTGGCTTTGGGGCACTGACCTTGTCTCCCCAGAGGTGCTGACGCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTGACACACGTGCTGGGGAGACAAGGTCAGTaGCCCAAAGCCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CWTRWGRLGGSLQVTHVLGRQGQ*PKASGS
Trigger: GCTGCCACTGGCTTTGGGGCACTGACCTTGTCTCCC...CAGCACGTGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp AGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTGCCCACCTTGGTCCACGTCGTaGAGGCCCGTGACCTCAAAC +
Preference number: 4 (lower is better)
Translates to: RPHHASSPPAGDVLTPCPPWSTS*RPVTSN
Trigger: GTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGG...TGGGCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp ACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGCTCGCATCCACCCTTaGTCCACGTCGTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TAAHTTCISYARVKQQQGARIHP*STSWRP
Trigger: GGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGC...GCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CTGCCCCACCCCTCGCTGGAAATGCCTGTCCCGATATGGCCCACGGGTCCTGCCTGGTCCTTCAGTGTCTaGATGTACCTGGCCCCGACA +
Preference number: 4 (lower is better)
Translates to: LPHPSLEMPVPIWPTGPAWSFSV*MYLAPT
Trigger: TGTCGGGGCCAGGTACATCCAGACACTGAAGGACCA...GGCAGGACCCGTGGGCCATATCGGGACAGGCATTTCCAGCGAGGGGTGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGTGGGTGGCAGGTATGTGGGGGTGGAGCTCTCAGCTCTATCACTGCCAGGCCCAAGTGCTCTGAGGCCTaGCTGTCCCACACCATCCGG +
Preference number: 4 (lower is better)
Translates to: GGWQVCGGGALSSITARPKCSEA*LSHTIR
Trigger: CCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTT...GGGCCTGGCAGTGATAGAGCTGAGAGCTCCACCCCCACATACCTGCCACCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TCCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGCCCCTCATGGGAGGATaGGGAGTCACATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SSEPISRAAPAPLPCWTRPLMGG*GVTWCP
Trigger: TGGGCACCATGTGACTCCCCATCCTCCCATGAGGGG...CCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp ATGGTGACGAGGGGCAGGGGAACGAGGGCCACCAGGCCTTGGCTCATGATGCCTCCTCGAATCCAGGAGTaGGCGAGTCCGGGATGGTTC +
Preference number: 4 (lower is better)
Translates to: MVTRGRGTRATRPWLMMPPRIQE*ASPGWF
Trigger: GAACCATCCCGGACTCGCCCACTCCTGGATTCGAGG...AGGCATCATGAGCCAAGGCCTGGTGGCCCTCGTTCCCCTGCCCCTCGTCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GTTAGCGTCAGCACCTCTGGGGAGACAAGGTCAGTGCCCCAAAGCCAGTGGCAGGGCTGGCCAGGTGGGTaGCAGGTATGTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VSVSTSGETRSVPQSQWQGWPGG*QVCGGG
Trigger: TCCACCCCCACATACCTGCCACCCACCTGGCCAGCC...CTGCCACTGGCTTTGGGGCACTGACCTTGTCTCCCCAGAGGTGCTGACGCTAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CTCGCAGGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGTGGGGACGTCTGGGTaGCTCTCTGCAGGTGACACA +
Preference number: 4 (lower is better)
Translates to: LAGLPDVQAEAFSSVGALVGTSG*LSAGDT
Trigger: TGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCAC...CAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GTTAGCGTCAGCACCTCTGGGGAGACAAGGTCAGTGCCCCAAAGCCAGTGGCAGCCGTGCTGGACTCGGTaGGGACGTCTGGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VSVSTSGETRSVPQSQWQPCWTR*GRLGGS
Trigger: AGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGG...CTGCCACTGGCTTTGGGGCACTGACCTTGTCTCCCCAGAGGTGCTGACGCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GTTAGCGTCAGCACCTCTGGGGAGACAAGGTCAGTGCCCCAAAGCCAGTGGCAGGCACCCTTGCCGTGCTaGACTCGGTGGGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: VSVSTSGETRSVPQSQWQAPLPC*TRWGRL
Trigger: CAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGC...CTGCCACTGGCTTTGGGGCACTGACCTTGTCTCCCCAGAGGTGCTGACGCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGTGGGTGGCAGGTATGTGGGGGTGGAGCTCTCAGCTCTATCACTGCCAGGCCCTTCCTCACCACCGGCTaGAGATGTCCTGACCCCCTG +
Preference number: 4 (lower is better)
Translates to: GGWQVCGGGALSSITARPFLTTG*RCPDPL
Trigger: CAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAA...GGGCCTGGCAGTGATAGAGCTGAGAGCTCCACCCCCACATACCTGCCACCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTAGGCTTTCTCAAGTGTaGGTGCCTTGGGTCCGACCC +
Preference number: 4 (lower is better)
Translates to: PGGGFLKCGCLGSDPGPPRLSQV*VPWVRP
Trigger: GGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCT...AGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp TGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTAGGCTTTCTCAAGTGTaGGTGCCTTGGGTCCGACCC +
Preference number: 4 (lower is better)
Translates to: CTLAVLDSVGTSGWLSAGRLSQV*VPWVRP
Trigger: GGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCT...ACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCGCAGCAGCAGGGCGGTaGGAACGGCTGCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPAAAGR*ERLHLH
Trigger: GTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGCTGC...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGGACCCCACCCAATGCTGATCTaGCAATGCCTAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLELSGCPPARTHPGQGPHPMLI*QCLAPG
Trigger: GCCTGGAGCTAGGCATTGCCAGATCAGCATTGGGTG...GGGTCCCTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GTTAGCGTCAGCACCTCTGGGGAGACAAGGTCAGTGCCCCAAAGCCAGTGGCAGGGGGTGAGGGTTGTGTaGGGACCCTGGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: VSVSTSGETRSVPQSQWQGVRVV*GPWPQG
Trigger: TCCCTGTGGCCAGGGTCCCCACACAACCCTCACCCC...CTGCCACTGGCTTTGGGGCACTGACCTTGTCTCCCCAGAGGTGCTGACGCTAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACGTGGGGACGTCTGGGTaGCTCTCTAGAGCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: DVQAEAFSSVGALGPTQDVGTSG*LSRAGR
Trigger: ACGACCTGCTCTAGAGAGCCACCCAGACGTCCCCAC...GTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532909.5
CDS-3UTR TCA 90 bp ACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCCGTCGTGGAGGCCCGTaGCCTCAAACATCTCACGGC +
Preference number: 4 (lower is better)
Translates to: TAAHTTCISYARVKQQQGRRGGP*PQTSHG
Trigger: GCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACG...GCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACACAAACTCCTTGTGCGTaGACATGCCCAGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: GVTWCPGPPTEDCSRPVTQTPCA*TCPAGR
Trigger: CCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTG...TGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp AGGAGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTGCCAAACTCCTTGTGCGTaGACATGCCCAGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: RRPHHASSPPAGDVLTPCQTPCA*TCPAGR
Trigger: CCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTG...GCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGAGGGTGGGCCAGGCTCCTCTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: GRAEPRSRTSFKRVGQAPLEEVL*GLAVPH
Trigger: GTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAG...AGGAGCCTGGCCCACCCTCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR TCA 90 bp AACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCTGAGGCGGCAGAGCTaGGCCAAGGTCCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: NRRTHHLYLLCPCQAAAGLRRQS*AKVQDQ
Trigger: CTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAG...CCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR TCA 90 bp TGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCAGGGGGTCGTGCTACCTaGGGCGGCAGAGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CCPAFLPPRLSKVLGLQAGGRAT*GGRAEP
Trigger: TGGCTCAGCTCTGCCGCCTCAGGTAGCACGACCCCC...TGCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp TCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACAGCAACCCATCTCAGCCTCCTaGGTAGCCAGGAGTACAGGC +
Preference number: 4 (lower is better)
Translates to: SHGAQDPRLRTAADPSQQPISAS*VARSTG
Trigger: GCCTGTACTCCTGGCTACTCAGGAGGCTGAGATGGG...TTGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACAGCAATCTGTCCCGGGCCTTTaGCGAGCAGTAGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: SHGAQDPRLRTAADPSQQSVPGL*RAVAAM
Trigger: CATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGA...TTGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GAGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACTGCAGGCCCTTGGCATaGTTCCTGACAGCTCGCATC +
Preference number: 4 (lower is better)
Translates to: EDGESHGAQDPRLRTAADCRPLA*FLTARI
Trigger: GATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCA...GTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CCACCCTTGGTCCACGTCGTGGAGGCCCGTGACCTCAAACATCTCACGGCCACGAGCCGAGGCACTATGTaGAGGCCCTTGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: PPLVHVVEARDLKHLTATSRGTM*RPLACF
Trigger: GAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCT...CGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR GCA 90 bp TCCTTGTGCGTGAACATGCCCAGCTGGTCGGTCCCGGGGGTGATGGCAGGCGGGCCTGGACCACGGTCTTaGTCAGCTCCTCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: SLCVNMPSWSVPGVMAGGPGPRS*SAPLSH
Trigger: ATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGG...CCCGCCTGCCATCACCCCCGGGACCGACCAGCTGGGCATGTTCACGCACAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR GCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCAGCAGCCGGGCCTGGTaGAGAGCCTCGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEASSRAW*RASAKW
Trigger: CCACTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCT...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp TCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACAGCAAAGCACGGGGGCCAGCTaGTCAAACTCCTTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: SHGAQDPRLRTAADPSQQSTGAS*SNSLCV
Trigger: CACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCT...TTGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTGACACACGTGCTGCGACGTGCCTCCCACTaGGGCTCTTCTTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: CWTRWGRLGGSLQVTHVLRRASH*GSSCTR
Trigger: TCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCG...CAGCACGTGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CTCGCAGGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGCGACGTGCCTCCCACTaGGGCTCTTCTTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: LAGLPDVQAEAFSSVGALRRASH*GSSCTR
Trigger: TCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCG...CAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCCCTGTATTTCACACCTaGTCACTCACTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: GSPCTLAVLDSVGTSGWLPVFHT*SLTPWL
Trigger: AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG...GAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGGAGGCAGCCAGCGGATaGCCGGGTGGGAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWEAASG*PGGRGS
Trigger: CGAGCCCCTCCCACCCGGGCATCCGCTGGCTGCCTC...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCACACGGGTCCTGCCGTTaGCCCTCACCATGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAAHGSCR*PSPCSL
Trigger: CAGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTG...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTCACGGGTCCTGCCGTTaGCCCTCACCATGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RGFTMLPSVPPATAFQSTHGSCR*PSPCSL
Trigger: CAGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTG...AGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp ATGGTGACGAGGGGCAGGGGAACGAGGGCCACCAGGCCTTGGCTCATGATGCCTACCCCTCGCTGGAAATaGCTGTCCCGATATGGCCCA +
Preference number: 4 (lower is better)
Translates to: MVTRGRGTRATRPWLMMPTPRWK*LSRYGP
Trigger: TGGGCCATATCGGGACAGGCATTTCCAGCGAGGGGT...AGGCATCATGAGCCAAGGCCTGGTGGCCCTCGTTCCCCTGCCCCTCGTCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGGAACGGCTGCACCTaGACTGTGGCAGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GVSPCCPAFLPPRLSKVLGNGCT*TVAARR
Trigger: CCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCC...CAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGGCGGTGGGAACGGCTaGACCTGCACTGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EPPHTPLVSPMPVSSSSRGGGNG*TCTVAA
Trigger: AGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCC...CCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp AGGAGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTGCAAGTGGGTGAGCATGTaGATGAGGCCCACGCGCTTC +
Preference number: 4 (lower is better)
Translates to: RRPHHASSPPAGDVLTPCKWVSM*MRPTRF
Trigger: GAAGCGCGTGGGCCTCATCCACATGCTCACCCACTT...GCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GAGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACGTGTCTGGATGTACCTaGCCCCGACAACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: EDGESHGAQDPRLRTAADVSGCT*PRQQAH
Trigger: GTGAGCCTGTTGTCGGGGCCAGGTACATCCAGACAC...GTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TGGGAGGGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGCAGGGACTTCAGGGTTaGGTAGAAGACGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: WEGLELSGCPPARTHPGQQGLQG*VEDDVP
Trigger: AGGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTG...CTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCACAGCGGATGCCCGGGTaGGAGGGGCTCGAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: CCPAFLPPRLSKVLGLQAQRMPG*EGLELS
Trigger: TGAGAGCTCGAGCCCCTCCCACCCGGGCATCCGCTG...TGCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGCTGGCCAGGTGGGTaGCAGGTATGTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GVSPCCPAFLPPRLSKVLGWPGG*QVCGGG
Trigger: TCCACCCCCACATACCTGCCACCCACCTGGCCAGCC...CAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAGCACCCTTGCCGTGCTaGACTCGGTGGGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAAAPLPC*TRWGRL
Trigger: CAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGC...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACCCCACCTCAGCCCTGTaGGACCCAGTGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHPTSAL*DPVVRR
Trigger: CCTCCTCACCACTGGGTCCCACAGGGCTGAGGTGGG...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGAGGGTGGGCCAGGCTCCTTTCCTCACCACCGGCTaGAGATGTCCTGACCCCCTG +
Preference number: 4 (lower is better)
Translates to: GRAEPRSRTSFKRVGQAPFLTTG*RCPDPL
Trigger: CAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAA...AGGAGCCTGGCCCACCCTCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTAGCTGCACCTGCACTGTaGCAGCTCGCAGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: DGVSPCCPAFLPPRLSKVAAPAL*QLAGLP
Trigger: AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGC...TACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp AGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCGCAGCAGCAGGGCGGTaGGAACGGCTGCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: RHEPPHTPLVSPMPVSSSAAAGR*ERLHLH
Trigger: GTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGCTGC...GCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCACCCAATGCTGATCTaGCAATGCCTAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGGGFLKCGCLGSDPGPPHPMLI*QCLAPG
Trigger: GCCTGGAGCTAGGCATTGCCAGATCAGCATTGGGTG...AGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTCACCCAATGCTGATCTaGCAATGCCTAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CTLAVLDSVGTSGWLSAGHPMLI*QCLAPG
Trigger: GCCTGGAGCTAGGCATTGCCAGATCAGCATTGGGTG...ACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCTAACTAGGAGACCTTaGCCTGGGTCACCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: DVQAEAFSSVGALGPTQDLTRRP*PGSPKG
Trigger: GCCCTTGGGTGACCCAGGCCAAGGTCTCCTAGTTAG...GTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR CCA 90 bp CGGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCGTGTCTTCCCCAGGCTaGCCAGTGCTCCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RSQLTAASTSSSDPPISAVSSPG*PVLLGG
Trigger: CCCACCCAGGAGCACTGGCCAGCCTGGGGAAGACAC...GGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR TCA 90 bp CTGCCCCACCCCTCGCTGGAAATGCCTGTCCCGATATGGCCCACGGGTCCTGCCCCATACCATAGAAGTTaGGCCCCAGGAGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: LPHPSLEMPVPIWPTGPAPYHRS*APGGFC
Trigger: GCAAAATCCTCCTGGGGCTCAACTTCTATGGTATGG...GGCAGGACCCGTGGGCCATATCGGGACAGGCATTTCCAGCGAGGGGTGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp ATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCCAGCCCAGAAAGGCCTaGGCCAGGCTGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: MLPSVPPATAFQSTGITGQPRKA*ARLSWW
Trigger: CCACCAGGACAGCCTGGCTCAGGCCTTTCTGGGCTG...GCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATAGCAGCCGGGCCTGGTaGAGAGCCTCGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNSSRAW*RASAKW
Trigger: CCACTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCT...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp TGTACTCGAAGAAGTGCTCTGAGGCCTGGCTGTCCCACACCATCCGGGGCCTGTAGCACGGGGGCCAGCTaGTCAAACTCCTTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: CTRRSALRPGCPTPSGACSTGAS*SNSLCV
Trigger: CACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCT...ACAGGCCCCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR GCA 90 bp GACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACGCCCCAGGAGGATTTTaGTTCGCCACTTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: DVQAEAFSSVGALGPTQDAPGGF*FATWTS
Trigger: CGAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGC...GTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
CDS-3UTR GCA 90 bp CAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCTTGTACTCGAAGAAGTaGTCTGAGGCCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QAEAFSSVGALGPTQDPLLYSKK*SEAWLS
Trigger: GGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAA...GAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp ACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACAGCTCCAGCCGCACCTaGAGGGACTTCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: TGFHHVAQRSSRHGFPKYSSSRT*RDFRVG
Trigger: CCCAACCCTGAAGTCCCTGCAGGTGCGGCTGGAGCT...GTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAGCTCCAGCCGCACCTaGAGGGACTTCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRSSSRT*RDFRVG
Trigger: CCCAACCCTGAAGTCCCTGCAGGTGCGGCTGGAGCT...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp CGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTAGCTCCAGCCGCACCTaGAGGGACTTCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RGFTMLPSVPPATAFQSTSSSRT*RDFRVG
Trigger: CCCAACCCTGAAGTCCCTGCAGGTGCGGCTGGAGCT...AGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACCCCCCGACTGAGGACTaGAGCAGACCCGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHPPTED*SRPVTA
Trigger: TGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGG...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCATGGGGAGTCACATGGTaGCCAGGACCCCCGACTGAG +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAAWGVTW*PGPPTE
Trigger: CTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCA...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATCAGCCCCTGCACCCTTaGCGTGCTGGACTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNQPLHP*RAGLGG
Trigger: CCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTG...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGCGTTGCCCCTCACCATaGTCCCTGATGTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: HHLYLLCPCQAAAGRWERRCPSP*SLMCPG
Trigger: GCCTGGACACATCAGGGAGCATGGTGAGGGGCAACG...CCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GGTGGGTGGCAGGTATGTGGGGGTGGAGCTCTCAGCTCTATCACTGCCAGGCCCTTTCTCAAGTGTGGGTaGCTTGGGTCCGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGWQVCGGGALSSITARPFLKCG*LGSDPG
Trigger: TCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAA...GGGCCTGGCAGTGATAGAGCTGAGAGCTCCACCCCCACATACCTGCCACCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp GTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGACGTCCAGCACTTGTATCTCCTATaGCCGTGTCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGTAAPALWQLAGLPDVQHLYLL*PCQAAA
Trigger: TGCTGCTGCTTGACACGGGCATAGGAGATACAAGTG...CTGGACGTCAGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GTTAGCGTCAGCACCTCTGGGGAGACAAGGTCAGTGCCCCAAAGCCAGTGGCAGGGGGTTTCACCATGTTaGCCAGCGTTCCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: VSVSTSGETRSVPQSQWQGVSPC*PAFLPP
Trigger: TGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC...CTGCCACTGGCTTTGGGGCACTGACCTTGTCTCCCCAGAGGTGCTGACGCTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CGTTGCCCCTCACCATGCTCCCTGATGTGTCCAGGCTGGCCTGGGGGTCGTGCTTCGGTCACAGCTCACTaGAGCCTCAACCTCATCAAG +
Preference number: 4 (lower is better)
Translates to: RCPSPCSLMCPGWPGGRASVTAH*SLNLIK
Trigger: CTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACCGA...AGCACGACCCCCAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGGGGCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGCTGGGTGGCAGAGGTTaGGGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: EPPHTPLVSPMPVSSSSRLGGRG*GEPRSR
Trigger: GCGCGATCTTGGCTCACCGCAACCTCTGCCACCCAG...CCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454838.6
CDS-3UTR CCA 90 bp ATCCAGCACGGGGGCCAGCTGCTCAAACTCCTTGTGCGTGAACATGCCCAGCTGCCTTGGTCCACGTCGTaGAGGCCCGTGACCTCAAAC +
Preference number: 4 (lower is better)
Translates to: IQHGGQLLKLLVREHAQLPWSTS*RPVTSN
Trigger: GTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGG...CAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR CCA 90 bp TCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCGCTCGCATCCACCCTTaGTCCACGTCGTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLTPWLRKEHVHRGGRNAARIHP*STSWRP
Trigger: GGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGC...GGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GAGGGCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAAAGTGGGTGAGCATGTaGATGAGGCCCACGCGCTTC +
Preference number: 4 (lower is better)
Translates to: EGPRIQEWASPGWFQSFQKWVSM*MRPTRF
Trigger: GAAGCGCGTGGGCCTCATCCACATGCTCACCCACTT...TTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCAGCAGCCGGGCCTaGTGCAGAGCCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FTPAHSLHGLEKNTSTAEASSRA*CRASAK
Trigger: CTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCTGGC...CTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp ACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACGTGAACATGCCCAGCTaGTCGGTCCCGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: TGFHHVAQRSSRHGFPKYVNMPS*SVPGVM
Trigger: CATCACCCCCGGGACCGACCAGCTGGGCATGTTCAC...GTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GTCGTGCTACCTGAGGCGGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGATTCGGGTCCAGGACCTaGACGCAGGCTCGAACCCAG +
Preference number: 4 (lower is better)
Translates to: VVLPEAAELSQGPGPVSRFGSRT*TQARTQ
Trigger: CTGGGTTCGAGCCTGCGTCCAGGTCCTGGACCCGAA...TCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAGGTAGCACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GAGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACTGGTCCTTCAGTGTCTaGATGTACCTGGCCCCGACA +
Preference number: 4 (lower is better)
Translates to: EDGESHGAQDPRLRTAADWSFSV*MYLAPT
Trigger: TGTCGGGGCCAGGTACATCCAGACACTGAAGGACCA...GTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACCCACATCCAGCAAGTGCTCTGAGGCCTaGCTGTCCCACACCATCCGG +
Preference number: 4 (lower is better)
Translates to: SRSGRVRDGSRASKPTSSKCSEA*LSHTIR
Trigger: CCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTT...GCTGGATGTGGGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TGTACTCGAAGAAGTGCTCTGAGGCCTGGCTGTCCCACACCATCCGGGGCCTGTAAGTGCTCTGAGGCCTaGCTGTCCCACACCATCCGG +
Preference number: 4 (lower is better)
Translates to: CTRRSALRPGCPTPSGACKCSEA*LSHTIR
Trigger: CCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTT...ACAGGCCCCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR CCA 90 bp CCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTCAGGGACTTCAGGGTTaGGTAGAAGACGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: PLSPFLGQPLHPCRAGLGQGLQG*VEDDVP
Trigger: AGGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTG...ACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCAGGGACTTCAGGGTTaGGTAGAAGACGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: DVQAEAFSSVGALGPTQDQGLQG*VEDDVP
Trigger: AGGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTG...GTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp ACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTGTGGGGCAGGTACTGTaGGCCCCGCCTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TANGVEACISHLLTHSMAVGQVL*APPAQL
Trigger: CAGCTGGGCAGGCGGGGCCCACAGTACCTGCCCCAC...AGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp ACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCCCTCGAATCCAGGAGTaGGCGAGTCCGGGATGGTTC +
Preference number: 4 (lower is better)
Translates to: TAAHTTCISYARVKQQQGPRIQE*ASPGWF
Trigger: GAACCATCCCGGACTCGCCCACTCCTGGATTCGAGG...GCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CTCGCAGGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGCAGGTATGTGGGGGTaGAGCTCTCAGCTCTATCAC +
Preference number: 4 (lower is better)
Translates to: LAGLPDVQAEAFSSVGALAGMWG*SSQLYH
Trigger: GTGATAGAGCTGAGAGCTCCACCCCCACATACCTGC...CAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCGTGCTGGACTCGGTaGGGACGTCTGGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMPCWTR*GRLGGS
Trigger: AGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGG...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCGCACCCTTGCCGTGCTaGACTCGGTGGGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: RHEPPHTPLVSPMPVSSSAPLPC*TRWGRL
Trigger: CAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGC...GCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGATGCCTGTCCCGATATaGCCCACGGGTCCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: HHLYLLCPCQAAAGRWERMPVPI*PTGPAV
Trigger: AACGGCAGGACCCGTGGGCCATATCGGGACAGGCAT...CCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGCCAGCTCCCGTCCTGTaGAGGAGACCCCACCATGCT +
Preference number: 4 (lower is better)
Translates to: GVSPCCPAFLPPRLSKVLPAPVL*RRPHHA
Trigger: AGCATGGTGGGGTCTCCTCCACAGGACGGGAGCTGG...CAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp AGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGCTGGCCAGTGCTCCTaGGTGGGGTCGCGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SKRSGGLYFTPAHSLHGLAGQCS*VGSRRL
Trigger: GAGCCGCCGCGACCCCACCCAGGAGCACTGGCCAGC...TAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR TCA 90 bp CAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCGGCTTATCTGAAAACTaGCTCTTCTCCAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QAEAFSSVGALGPTQDPLGLSEN*LFSSSV
Trigger: GACGCTGCTGGAGAAGAGTCAGTTTTCAGATAAGCC...GAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323578.13
ENST00000449825.5
CDS-3UTR TCA 90 bp CCGAGGCACTATGTGCAGGCCCTTGGCATGCTTCCTGACAGCTCGCATCCACCCGGCTGTTCCATGGAGTaGCATAGCCCAGTACATCCC +
Preference number: 4 (lower is better)
Translates to: PRHYVQALGMLPDSSHPPGCSME*HSPVHP
Trigger: GGGATGTACTGGGCTATGTCACTCCATGGAACAGCC...GGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR TCA 90 bp GAGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACTCCCAAAGACCTTGGTaGCATCGTAGCCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: EDGESHGAQDPRLRTAADSQRPW*HRSHGC
Trigger: ACAGCCATGGCTACGATGTCACCAAGGTCTTTGGGA...GTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp CCACCCTTGGTCCACGTCGTGGAGGCCCGTGACCTCAAACATCTCACGGCCACGCGGGTGAGATCTGTGTaGACTTGCTCCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: PPLVHVVEARDLKHLTATRVRSV*TCSQRP
Trigger: AGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCG...CGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR TCA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCGTCGTGGAGGCCCGTaGCCTCAAACATCTCACGGC +
Preference number: 4 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMRRGGP*PQTSHG
Trigger: GCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACG...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCCGTCGTGGAGGCCCGTaGCCTCAAACATCTCACGGC +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEARRGGP*PQTSHG
Trigger: GCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACG...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp CCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCCATACCATAGAAGTTaGGCCCCAGGAGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: PGGGFLKCGCLGSDPGPPPYHRS*APGGFC
Trigger: GCAAAATCCTCCTGGGGCTCAACTTCTATGGTATGG...AGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
CDS-3UTR TCA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACCTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHLEEVL*GLAVPH
Trigger: GTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAG...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR TCA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGCCCCGCCTGCCCAGCTaGCAGGAGGCAGCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTPRLPS*QEAASG
Trigger: TCCGCTGGCTGCCTCCTGTCAGCTGGGCAGGCGGGG...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp CACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCGTGGCTCTCTGCAGGTaGCACACGTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HTCSLTPWLRKEHVHRGGVALCR*HTCCGW
Trigger: CCAGCCACAGCACGTGTGTCACCTGCAGAGAGCCAC...GCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp CACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCCTGAGGCGGCAGAGCTaGGCCAAGGTCCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: HSKRSGGLYFTPAHSLHGLRRQS*AKVQDQ
Trigger: CTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAG...GCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp CACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTGTGGGACCCAGTGGTaGGGAGGGGAGTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: HSKRSGGLYFTPAHSLHGCGTQW*GGESSR
Trigger: CCGTGAGGACTCCCCTCCTCACCACTGGGTCCCACA...GCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGCCCATCTCAGCCTCCTaGGTAGCCAGGAGTACAGGC +
Preference number: 4 (lower is better)
Translates to: GVSPCCPAFLPPRLSKVLPISAS*VARSTG
Trigger: GCCTGTACTCCTGGCTACTCAGGAGGCTGAGATGGG...CAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCCCCTGGCCACAGGGATaGCGGTCAGTTCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEAPWPQG*RSVQVG
Trigger: CCCAACCTGAACTGACCGTCATCCCTGTGGCCAGGG...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp ATCCAGCACGGGGGCCAGCTGCTCAAACTCCTTGTGCGTGAACATGCCCAGCTGCCTTGGCATGCTTCCTaGCAGCTCGCATCCACCACT +
Preference number: 4 (lower is better)
Translates to: IQHGGQLLKLLVREHAQLPWHAS*QLASTT
Trigger: AGTGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGG...CAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR GCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCATCTGTCCCGGGCCTTTaGCGAGCAGTAGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAASVPGL*RAVAAM
Trigger: CATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGA...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp GTTAGCGTCAGCACCTCTGGGGAGACAAGGTCAGTGCCCCAAAGCCAGTGGCAGTGCAGGCCCTTGGCATaGTTCCTGACAGCTCGCATC +
Preference number: 4 (lower is better)
Translates to: VSVSTSGETRSVPQSQWQCRPLA*FLTARI
Trigger: GATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCA...CTGCCACTGGCTTTGGGGCACTGACCTTGTCTCCCCAGAGGTGCTGACGCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATCTAGCAGCCGGGCCTGGTaGAGAGCCTCGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: RNAGSLPPGPRSCSAPLSSSRAW*RASAKW
Trigger: CCACTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCT...AGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR GCA 90 bp ACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCCGACGTGCCTCCCACTaGGGCTCTTCTTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: TAAHTTCISYARVKQQQGRRASH*GSSCTR
Trigger: TCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCG...GCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCAGCTCCAGCCGCACCTaGAGGGACTTCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEASSSRT*RDFRVG
Trigger: CCCAACCCTGAAGTCCCTGCAGGTGCGGCTGGAGCT...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTCCCCCGACTGAGGACTaGAGCAGACCCGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPPPTED*SRPVTA
Trigger: TGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGG...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCTGGGGAGTCACATGGTaGCCAGGACCCCCGACTGAG +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEAWGVTW*PGPPTE
Trigger: CTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCA...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATCCTGCACCCTTGCCGTaGTGGACTCGGTGGGGACGT +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNPAPLP*WTRWGR
Trigger: ACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGG...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTCGTTGCCCCTCACCATaGTCCCTGATGTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RGFTMLPSVPPATAFQSTRCPSP*SLMCPG
Trigger: GCCTGGACACATCAGGGAGCATGGTGAGGGGCAACG...AGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp AACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGAGGGTGGGTGTAGCCTaGCAGCCACATGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NRRTHHLYLLCPCQAAAGRVGVA*QPHVLC
Trigger: GCAGAGGACATGTGGCTGGCAGGCTACACCCACCCT...CCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGAGGGTGGGTGTAGCCTaGCAGCCACATGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GVSPCCPAFLPPRLSKVLRVGVA*QPHVLC
Trigger: GCAGAGGACATGTGGCTGGCAGGCTACACCCACCCT...CAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTGACACACGTGCTGACATGTACCCACCTATaGCCTCTACTGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: CWTRWGRLGGSLQVTHVLTCTHL*PLLPTS
Trigger: TGAGGTGGGCAGTAGAGGGCATAGGTGGGTACATGT...CAGCACGTGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TACAGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCGGCGGTGGGAACGGCTaGACCTGCACTGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: YRHEPPHTPLVSPMPVSSGGGNG*TCTVAA
Trigger: AGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCC...GCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp CACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCGGCGGTGGGAACGGCTaGACCTGCACTGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HSKRSGGLYFTPAHSLHGGGGNG*TCTVAA
Trigger: AGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCC...GCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp AACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGGGGGTTTCACCATGTTaGCCAGCGTTCCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: NRRTHHLYLLCPCQAAAGGVSPC*PAFLPP
Trigger: TGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC...CCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GGTGGGTGGCAGGTATGTGGGGGTGGAGCTCTCAGCTCTATCACTGCCAGGCCCTCGGTCACAGCTCACTaGAGCCTCAACCTCATCAAG +
Preference number: 4 (lower is better)
Translates to: GGWQVCGGGALSSITARPSVTAH*SLNLIK
Trigger: CTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACCGA...GGGCCTGGCAGTGATAGAGCTGAGAGCTCCACCCCCACATACCTGCCACCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCGGGAGACAAGGTCAGTaGCCCAAAGCCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPGRQGQ*PKASGS
Trigger: GCTGCCACTGGCTTTGGGGCACTGACCTTGTCTCCC...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCCTGGGTGGCAGAGGTTaGGGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEALGGRG*GEPRSR
Trigger: GCGCGATCTTGGCTCACCGCAACCTCTGCCACCCAG...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCTCGCATCCACCCTTaGTCCACGTCGTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNARIHP*STSWRP
Trigger: GGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGC...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GTCGTGCTACCTGAGGCGGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGAAGGCCCACGCGCTTCTaGCTTAGCAGCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VVLPEAAELSQGPGPVSRRPTRF*LSSWFQ
Trigger: CTGGAACCAGCTGCTAAGCCAGAAGCGCGTGGGCCT...TCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAGGTAGCACGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCAGGCCCACGCGCTTCTaGCTTAGCAGCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPRPTRF*LSSWFQ
Trigger: CTGGAACCAGCTGCTAAGCCAGAAGCGCGTGGGCCT...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGGTGAACATGCCCAGCTaGTCGGTCCCGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMVNMPS*SVPGVM
Trigger: CATCACCCCCGGGACCGACCAGCTGGGCATGTTCAC...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp AGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCGTGAACATGCCCAGCTaGTCGGTCCCGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: RHEPPHTPLVSPMPVSSSVNMPS*SVPGVM
Trigger: CATCACCCCCGGGACCGACCAGCTGGGCATGTTCAC...GCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TCAGGGTTGGGTAGAAGACGACGTGCCTCCCACTGCGGCTCTTCTTGTACTCGATTCGGGTCCAGGACCTaGACGCAGGCTCGAACCCAG +
Preference number: 4 (lower is better)
Translates to: SGLGRRRRASHCGSSCTRFGSRT*TQARTQ
Trigger: CTGGGTTCGAGCCTGCGTCCAGGTCCTGGACCCGAA...TCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCGTCTTCTACCCAACCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR CCA 90 bp CTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGTTTTGCTTCGCCACTTaGACTTCGGGTCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: LTSRRRLSQVWVPWVRPRFCFAT*TSGPGP
Trigger: AGGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAA...CCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACAAGTGCTCTGAGGCCTaGCTGTCCCACACCATCCGG +
Preference number: 4 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHKCSEA*LSHTIR
Trigger: CCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTT...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAAAGTGCTCTGAGGCCTaGCTGTCCCACACCATCCGG +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAAKCSEA*LSHTIR
Trigger: CCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTT...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGAAGTGCTCTGAGGCCTaGCTGTCCCACACCATCCGG +
Preference number: 4 (lower is better)
Translates to: GFHHVAQRSSRHGFPKYWKCSEA*LSHTIR
Trigger: CCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTT...CCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CGGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCCCCCTCATGGGAGGATaGGGAGTCACATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RSQLTAASTSSSDPPISAPLMGG*GVTWCP
Trigger: TGGGCACCATGTGACTCCCCATCCTCCCATGAGGGG...GGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACCG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGCCCCTCATGGGAGGATaGGGAGTCACATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: EPPHTPLVSPMPVSSSSRPLMGG*GVTWCP
Trigger: TGGGCACCATGTGACTCCCCATCCTCCCATGAGGGG...CCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGTGGGGCAGGTACTGTaGGCCCCGCCTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGVGQVL*APPAQL
Trigger: CAGCTGGGCAGGCGGGGCCCACAGTACCTGCCCCAC...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCTGGACACCGCTGCATaGCAGGGTGGGTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: HTCSLTPWLRKEHVHRGGLDTAA*QGGCSL
Trigger: CAGGCTACACCCACCCTGCCATGCAGCGGTGTCCAG...GCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GTCGTGCTACCTGAGGCGGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGATTCCTCACCACCGGCTaGAGATGTCCTGACCCCCTG +
Preference number: 4 (lower is better)
Translates to: VVLPEAAELSQGPGPVSRFLTTG*RCPDPL
Trigger: CAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAA...TCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAGGTAGCACGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCTGCACCTGCACTGTaGCAGCTCGCAGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNAAPAL*QLAGLP
Trigger: AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGC...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
3UTR CAA 72 bp TCCTCAAACAGGAGCCGAGGCACTATGTGCAGGCCCTaGGCATGCTTCCTGACAGCTCGCATCCACCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSNRSRGTMCRP*ACFLTARIHPW
Trigger: CCAAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCTCCTGTTTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR TCA 90 bp GAGGGCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAACGGGTGAGATCTGTGTaGACTTGCTCCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: EGPRIQEWASPGWFQSFQRVRSV*TCSQRP
Trigger: AGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCG...TTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATCGTCGTGGAGGCCCGTaGCCTCAAACATCTCACGGC +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNRRGGP*PQTSHG
Trigger: GCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACG...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACCCTTGGCATGCTTCCTaGCAGCTCGCATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHPWHAS*QLASTL
Trigger: AAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGG...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGCCTTGGCATGCTTCCTaGCAGCTCGCATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: GFHHVAQRSSRHGFPKYWPWHAS*QLASTL
Trigger: AAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGG...CCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp AGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCCTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: RHEPPHTPLVSPMPVSSSLEEVL*GLAVPH
Trigger: GTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAG...GCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR TCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCCCCGCCTGCCCAGCTaGCAGGAGGCAGCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHPRLPS*QEAASG
Trigger: TCCGCTGGCTGCCTCCTGTCAGCTGGGCAGGCGGGG...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp CGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGGGGGGTCGTGCTACCTaGGGCGGCAGAGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RSGGLYFTPAHSLHGLEKGGRAT*GGRAEP
Trigger: TGGCTCAGCTCTGCCGCCTCAGGTAGCACGACCCCC...CTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCCCAGGCCTTGGCTCATaGTGCCTCCAAATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPPGLGS*CLQIPQ
Trigger: CTGGGGAATTTGGAGGCATCATGAGCCAAGGCCTGG...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp ATTACAGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAACACCCCACGGCATTCTaGGTGAGGGACGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ITGMNRRTHHLYLLCPCQHPTAF*VRDAQA
Trigger: GGCCTGGGCGTCCCTCACTCAGAATGCCGTGGGGTG...TTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGACACCCCACGGCATTCTaGGTGAGGGACGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGHPTAF*VRDAQA
Trigger: GGCCTGGGCGTCCCTCACTCAGAATGCCGTGGGGTG...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp CAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAGCTCGCAGGCCTCCCTaGCGTCCAGGCGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: QTEWRPVFHTCSLTPWLRARRPP*RPGGGF
Trigger: AAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAGC...TCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp TGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTGTCACTCCTAGGCCTTaGAACATTCTAGTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: CTLAVLDSVGTSGWLSAGVTPRP*NILVQR
Trigger: CCTCTGAACTAGAATGTTTCAAGGCCTAGGAGTGAC...ACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR GCA 90 bp CCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTCTGTCCCGGGCCTTTaGCGAGCAGTAGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: PPPRSHRNAGSLPPGPRSSVPGL*RAVAAM
Trigger: CATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGA...AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR GCA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACAGCCGAGGCACTATGTaGAGGCCCTTGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHSRGTM*RPLACF
Trigger: GAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCT...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp GAGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACACGAAGCCATCGAAATaGTGGTTCTTTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: EDGESHGAQDPRLRTAADTKPSK*WFFATW
Trigger: CCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGT...GTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACAGCAATGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SHGAQDPRLRTAADPSQQCSNSL*VNMPSW
Trigger: CCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCA...TTGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GAGGGCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAATGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGPRIQEWASPGWFQSFQCSNSL*VNMPSW
Trigger: CCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCA...TTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCAGCACGGGGGCCAGCTaGTCAAACTCCTTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEASTGAS*SNSLCV
Trigger: CACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCT...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp CCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTAGCACGGGGGCCAGCTaGTCAAACTCCTTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: PPPRSHRNAGSLPPGPRSSTGAS*SNSLCV
Trigger: CACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCT...AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR GCA 90 bp ACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGCGACGTGCCTCCCACTaGGGCTCTTCTTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: TPLVSPMPVSSSSRAVGTRRASH*GSSCTR
Trigger: TCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCG...CGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCCGACGTGCCTCCCACTaGGGCTCTTCTTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRRRASH*GSSCTR
Trigger: TCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCG...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATAGCTCCAGCCGCACCTaGAGGGACTTCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNSSSRT*RDFRVG
Trigger: CCCAACCCTGAAGTCCCTGCAGGTGCGGCTGGAGCT...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp CCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCCTGTATTTCACACCTaGTCACTCACTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: PGGGFLKCGCLGSDPGPPPVFHT*SLTPWL
Trigger: AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG...AGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACCCCTCGCTGGAAATaGCTGTCCCGATATGGCCCA +
Preference number: 4 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPTPRWK*LSRYGP
Trigger: TGGGCCATATCGGGACAGGCATTTCCAGCGAGGGGT...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp AACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGACCCCTCGCTGGAAATaGCTGTCCCGATATGGCCCA +
Preference number: 4 (lower is better)
Translates to: NRRTHHLYLLCPCQAAAGTPRWK*LSRYGP
Trigger: TGGGCCATATCGGGACAGGCATTTCCAGCGAGGGGT...CCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGTTTCTCAAGTGTGGGTaGCTTGGGTCCGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: HHLYLLCPCQAAAGRWERFLKCG*LGSDPG
Trigger: TCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAA...CCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp AGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTGCCCACACTTGTATCTCCTATaGCCGTGTCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPHHASSPPAGDVLTPCPHLYLL*PCQAAA
Trigger: TGCTGCTGCTTGACACGGGCATAGGAGATACAAGTG...TGGGCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp ATGGTGACGAGGGGCAGGGGAACGAGGGCCACCAGGCCTTGGCTCATGATGCCTCACTTGTATCTCCTATaGCCGTGTCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: MVTRGRGTRATRPWLMMPHLYLL*PCQAAA
Trigger: TGCTGCTGCTTGACACGGGCATAGGAGATACAAGTG...AGGCATCATGAGCCAAGGCCTGGTGGCCCTCGTTCCCCTGCCCCTCGTCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp ATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCGGGGTTTCACCATGTTaGCCAGCGTTCCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: MLPSVPPATAFQSTGITGGVSPC*PAFLPP
Trigger: TGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC...GCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp TCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACAGCAAGCCATGGCTGTTCCATaGAGTGACATAGCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: SHGAQDPRLRTAADPSQQAMAVP*SDIAQY
Trigger: GTACTGGGCTATGTCACTCCATGGAACAGCCATGGC...TTGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GACTGCAGCAGACCCGTCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCCTTGGTCCACGTCGTaGAGGCCCGTGACCTCAAAC +
Preference number: 4 (lower is better)
Translates to: DCSRPVTANGVEACISHLPWSTS*RPVTSN
Trigger: GTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGG...CAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGACGGGTCTGCTGCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTCCTTGGTCCACGTCGTaGAGGCCCGTGACCTCAAAC +
Preference number: 4 (lower is better)
Translates to: PPPRSHRNAGSLPPGPRSPWSTS*RPVTSN
Trigger: GTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGG...AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CCA 90 bp TTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCTCGCATCCACCCTTaGTCCACGTCGTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: FTPAHSLHGLEKNTSTAEARIHP*STSWRP
Trigger: GGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGC...CTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp ACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGAGAGCCTCGGCCAAGTaGGTGAGCATGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: TPLVSPMPVSSSSRAVGTRASAK*VSMWMR
Trigger: CCTCATCCACATGCTCACCCACTTGGCCGAGGCTCT...CGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GAGGGCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAATTTTGCTTCGCCACTTaGACTTCGGGTCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: EGPRIQEWASPGWFQSFQFCFAT*TSGPGP
Trigger: AGGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAA...TTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGCTCACGGGCATCCTTaGAGGTCGCGTAGTCCATAC +
Preference number: 4 (lower is better)
Translates to: GFHHVAQRSSRHGFPKYWAHGHP*RSRSPY
Trigger: GTATGGACTACGCGACCTCCAAGGATGCCCGTGAGC...CCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
CDS-3UTR CCA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACGTGTCTGGATGTACCTaGCCCCGACAACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHVSGCT*PRQQAH
Trigger: GTGAGCCTGTTGTCGGGGCCAGGTACATCCAGACAC...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGTGGTCCTTCAGTGTCTaGATGTACCTGGCCCCGACA +
Preference number: 4 (lower is better)
Translates to: HHLYLLCPCQAAAGRWERWSFSV*MYLAPT
Trigger: TGTCGGGGCCAGGTACATCCAGACACTGAAGGACCA...CCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000534207.5
CDS-3UTR CCA 90 bp TCCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTCACAGCAAACGGAGTaGAGGCCTGTATTTCACACC +
Preference number: 4 (lower is better)
Translates to: SSEPISRAAPAPLPCWTRSQQTE*RPVFHT
Trigger: GGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA...CCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCGGATGGGGAGTCACATaGTGCCCAGGACCCCCGACT +
Preference number: 4 (lower is better)
Translates to: HSKRSGGLYFTPAHSLHGGWGVT*CPGPPT
Trigger: AGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCC...GCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTCCCCTCATGGGAGGATaGGGAGTCACATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPPLMGG*GVTWCP
Trigger: TGGGCACCATGTGACTCCCCATCCTCCCATGAGGGG...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCGTGGGGCAGGTACTGTaGGCCCCGCCTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLYFTPAHSLHGLEKNTSVGQVL*APPAQL
Trigger: CAGCTGGGCAGGCGGGGCCCACAGTACCTGCCCCAC...GGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCCCTCGAATCCAGGAGTaGGCGAGTCCGGGATGGTTC +
Preference number: 4 (lower is better)
Translates to: RHEPPHTPLVSPMPVSSSPRIQE*ASPGWF
Trigger: GAACCATCCCGGACTCGCCCACTCCTGGATTCGAGG...GCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGTGGGGACGTCTGGGTaGCTCTCTGCAGGTGACACA +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEAVGTSG*LSAGDT
Trigger: TGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCAC...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp ACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTCCGTGCTGGACTCGGTaGGGACGTCTGGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TANGVEACISHLLTHSMAPCWTR*GRLGGS
Trigger: AGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGG...AGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CACCCTCACTCCAACAGAAGCCACAGGACCCCCGAGAACAACTTGAATGTTAGCGTGTCCAGGCTGGCCTaGGGGTCGTGCTACCTGAGG +
Preference number: 4 (lower is better)
Translates to: HPHSNRSHRTPENNLNVSVSRLA*GSCYLR
Trigger: CCTCAGGTAGCACGACCCCCAGGCCAGCCTGGACAC...GCTAACATTCAAGTTGTTCTCGGGGGTCCTGTGGCTTCTGTTGGAGTGAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCCTGATGTGTCCAGGCTaGCCTGGGGGTCGTGCTACC +
Preference number: 4 (lower is better)
Translates to: HSKRSGGLYFTPAHSLHGLMCPG*PGGRAT
Trigger: GGTAGCACGACCCCCAGGCCAGCCTGGACACATCAG...GCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTATGCCTGTCCCGATATaGCCCACGGGTCCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPMPVPI*PTGPAV
Trigger: AACGGCAGGACCCGTGGGCCATATCGGGACAGGCAT...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCATGCCTGTCCCGATATaGCCCACGGGTCCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEAMPVPI*PTGPAV
Trigger: AACGGCAGGACCCGTGGGCCATATCGGGACAGGCAT...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCTGCCCCACCCCTCGCTaGAAATGCCTGTCCCGATAT +
Preference number: 4 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRCPTPR*KCLSRY
Trigger: ATATCGGGACAGGCATTTCCAGCGAGGGGTGGGGCA...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCCTGGACACCGCTGCATaGCAGGGTGGGTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: HSKRSGGLYFTPAHSLHGLDTAA*QGGCSL
Trigger: CAGGCTACACCCACCCTGCCATGCAGCGGTGTCCAG...GCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACCCACATCCAGCAGGGCCACCAGGCCTTaGCTCATGATGCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SRSGRVRDGSRASKPTSSRATRP*LMMPPN
Trigger: ATTTGGAGGCATCATGAGCCAAGGCCTGGTGGCCCT...GCTGGATGTGGGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp ACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGAGGCTTTCTCAAGTGTaGGTGCCTTGGGTCCGACCC +
Preference number: 4 (lower is better)
Translates to: TPLVSPMPVSSSSRAVGTRLSQV*VPWVRP
Trigger: GGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCT...CGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCTGGCTGTGGGGCCTTTaGGGCTGGGTTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRWLWGL*GWVCVF
Trigger: GAAGACACAAACCCAGCCCCAAAGGCCCCACAGCCA...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR CCA 90 bp GACTGCAGCAGACCCGTCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGGTTGTTGGAGGTGCCTaGTGGCTGTGGGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: DCSRPVTANGVEACISHLVVGGA*WLWGLW
Trigger: CCAAAGGCCCCACAGCCACCAGGCACCTCCAACAAC...CAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGACGGGTCTGCTGCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR TCA 90 bp GACTGCAGCAGACCCGTCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGTTTGACAGGGTAGTGTaGACAGGGCTGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DCSRPVTANGVEACISHLFDRVV*TGLQAR
Trigger: CCTGGCCTGCAGCCCTGTTCACACTACCCTGTCAAA...CAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGACGGGTCTGCTGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACGGCTGTTCCATGGAGTaGCATAGCCCAGTACATCCC +
Preference number: 4 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHGCSME*HSPVHP
Trigger: GGGATGTACTGGGCTATGTCACTCCATGGAACAGCC...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp CGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGCTGTTCCATGGAGTaGCATAGCCCAGTACATCCC +
Preference number: 4 (lower is better)
Translates to: RGFTMLPSVPPATAFQSTGCSME*HSPVHP
Trigger: GGGATGTACTGGGCTATGTCACTCCATGGAACAGCC...AGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp CCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGCTTCCCAAAGACCTTGGTaGCATCGTAGCCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: PLVSPMPVSSSSRAVGTASQRPW*HRSHGC
Trigger: ACAGCCATGGCTACGATGTCACCAAGGTCTTTGGGA...AGCCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp AACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCTGCAGCCAGACGGGTaGGATCTGTGTGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: NRRTHHLYLLCPCQAAAGLQPDG*DLCELA
Trigger: AGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAG...CCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCCTGCAGCCAGACGGGTaGGATCTGTGTGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRLQPDG*DLCELA
Trigger: AGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAG...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCTTGGCATGCTTCCTaGCAGCTCGCATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMPWHAS*QLASTL
Trigger: AAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGG...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GTAGAAGACGACGTGCCTCCCACTGCGGCTCTTCTTGTACTCGAAGAAGTGCTCCTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: VEDDVPPTAALLVLEEVLLEEVL*GLAVPH
Trigger: GTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAG...GAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCGTCTTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR TCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCCTCACCATGCTCCCTaGTGTGTCCAGGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWPHHAP*CVQAGL
Trigger: CAGGCCAGCCTGGACACATCAGGGAGCATGGTGAGG...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GACTGCAGCAGACCCGTCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCCAGGCCTTGGCTCATaGTGCCTCCAAATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: DCSRPVTANGVEACISHLPGLGS*CLQIPQ
Trigger: CTGGGGAATTTGGAGGCATCATGAGCCAAGGCCTGG...CAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGACGGGTCTGCTGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp AGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTGCAGGCCCTTGGCATaGTTCCTGACAGCTCGCATC +
Preference number: 4 (lower is better)
Translates to: RPPPRSHRNAGSLPPGPRCRPLA*FLTARI
Trigger: GATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCA...CCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR GCA 90 bp CACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCTGCAGGCCCTTGGCATaGTTCCTGACAGCTCGCATC +
Preference number: 4 (lower is better)
Translates to: HTCSLTPWLRKEHVHRGGCRPLA*FLTARI
Trigger: GATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCA...GCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACGCCCCAGGAGGATTTTaGTTCGCCACTTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHAPGGF*FATWTS
Trigger: CGAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGC...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp ACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGCCCCAGGAGGATTTTaGTTCGCCACTTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: TPLVSPMPVSSSSRAVGTAPGGF*FATWTS
Trigger: CGAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGC...CGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
CDS-3UTR GCA 90 bp ACGACGTGCCTCCCACTGCGGCTCTTCTTGTACTCGAAGAAGTGCTCTGAGGCCGCCCCAGGAGGATTTTaGTTCGCCACTTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: TTCLPLRLFLYSKKCSEAAPGGF*FATWTS
Trigger: CGAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGC...GGCCTCAGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR GCA 90 bp GGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGCCCCAGGAGGATTTTaGTTCGCCACTTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: GFHHVAQRSSRHGFPKYWAPGGF*FATWTS
Trigger: CGAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGC...CCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
CDS-3UTR GCA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCGACGTGCCTCCCACTaGGGCTCTTCTTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMRRASH*GSSCTR
Trigger: TCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCG...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGAGCTCCAGCCGCACCTaGAGGGACTTCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWSSSRT*RDFRVG
Trigger: CCCAACCCTGAAGTCCCTGCAGGTGCGGCTGGAGCT...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTCCCCCGACTGAGGACTaGAGCAGACCCGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: QQTEWRPVFHTCSLTPWLPPTED*SRPVTA
Trigger: TGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGG...AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp ACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTGGGGAGTCACATGGTaGCCAGGACCCCCGACTGAG +
Preference number: 4 (lower is better)
Translates to: TANGVEACISHLLTHSMAWGVTW*PGPPTE
Trigger: CTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCA...AGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGCAGCCCCTGCACCCTTaGCGTGCTGGACTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTQPLHP*RAGLGG
Trigger: CCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTG...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp GACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTATTTCTCAAGTGTGGGTaGCTTGGGTCCGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: DGVSPCCPAFLPPRLSKVFLKCG*LGSDPG
Trigger: TCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAA...TACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp ACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCTCGGTCACAGCTCACTaGAGCCTCAACCTCATCAAG +
Preference number: 4 (lower is better)
Translates to: TAAHTTCISYARVKQQQGSVTAH*SLNLIK
Trigger: CTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACCGA...GCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGATGCTGATCTGGCAATaGCTAGCTCCAGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: GFHHVAQRSSRHGFPKYWMLIWQ*LAPGPH
Trigger: GTGTGGGCCTGGAGCTAGGCATTGCCAGATCAGCAT...CCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATCCTTGGTCCACGTCGTaGAGGCCCGTGACCTCAAAC +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNPWSTS*RPVTSN
Trigger: GTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGG...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp ACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGTGGTTCTTTGCCACCTaGACCACGGTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TPLVSPMPVSSSSRAVGTWFFAT*TTVLLS
Trigger: GCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCA...CGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp ACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTTCTGGCTTAGCAGCTaGTTCCAGACCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: TGFHHVAQRSSRHGFPKYFWLSS*FQTSTT
Trigger: CGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAA...GTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCTTCTGGCTTAGCAGCTaGTTCCAGACCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRFWLSS*FQTSTT
Trigger: CGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAA...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCTTCTGGCTTAGCAGCTaGTTCCAGACCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPFWLSS*FQTSTT
Trigger: CGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAA...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp TGGCTTAGCAGCTGGTTCCAGACCTCCACCACGAAGCCATCGAAATGCTGGTTCAGGCCCACGCGCTTCTaGCTTAGCAGCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: WLSSWFQTSTTKPSKCWFRPTRF*LSSWFQ
Trigger: CTGGAACCAGCTGCTAAGCCAGAAGCGCGTGGGCCT...GAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR CCA 90 bp AGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGAAGTGGGTGAGCATGTaGATGAGGCCCACGCGCTTC +
Preference number: 4 (lower is better)
Translates to: RPPPRSHRNAGSLPPGPRKWVSM*MRPTRF
Trigger: GAAGCGCGTGGGCCTCATCCACATGCTCACCCACTT...CCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR CCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACGCCAGCAGCCGGGCCTaGTGCAGAGCCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNASSRA*CRASAK
Trigger: CTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCTGGC...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACGCCAGCAGCCGGGCCTaGTGCAGAGCCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHASSRA*CRASAK
Trigger: CTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCTGGC...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp ACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTGTGAACATGCCCAGCTaGTCGGTCCCGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: TANGVEACISHLLTHSMAVNMPS*SVPGVM
Trigger: CATCACCCCCGGGACCGACCAGCTGGGCATGTTCAC...AGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp TTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGTTCGGGTCCAGGACCTaGACGCAGGCTCGAACCCAG +
Preference number: 4 (lower is better)
Translates to: FTPAHSLHGLEKNTSTAEFGSRT*TQARTQ
Trigger: CTGGGTTCGAGCCTGCGTCCAGGTCCTGGACCCGAA...CTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCTCACGGGCATCCTTaGAGGTCGCGTAGTCCATAC +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEAAHGHP*RSRSPY
Trigger: GTATGGACTACGCGACCTCCAAGGATGCCCGTGAGC...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTGCTCACGGGCATCCTTaGAGGTCGCGTAGTCCATAC +
Preference number: 4 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPAHGHP*RSRSPY
Trigger: GTATGGACTACGCGACCTCCAAGGATGCCCGTGAGC...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCGTGTCTGGATGTACCTaGCCCCGACAACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: HTCSLTPWLRKEHVHRGGVSGCT*PRQQAH
Trigger: GTGAGCCTGTTGTCGGGGCCAGGTACATCCAGACAC...GCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGGTGTCTGGATGTACCTaGCCCCGACAACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMVSGCT*PRQQAH
Trigger: GTGAGCCTGTTGTCGGGGCCAGGTACATCCAGACAC...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCTGGTCCTTCAGTGTCTaGATGTACCTGGCCCCGACA +
Preference number: 4 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPWSFSV*MYLAPT
Trigger: TGTCGGGGCCAGGTACATCCAGACACTGAAGGACCA...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCACAGGGACTTCAGGGTTaGGTAGAAGACGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAAQGLQG*VEDDVP
Trigger: AGGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTG...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAACAGCGGATGCCCGGGTaGGAGGGGCTCGAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKQRMPG*EGLELS
Trigger: TGAGAGCTCGAGCCCCTCCCACCCGGGCATCCGCTG...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGGCCAGGCTGTCCTGGTaGGGCAGGTACTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTARLSW*GRYCGP
Trigger: GGGCCCACAGTACCTGCCCCACCAGGACAGCCTGGC...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCTGGGCGAGTCCGGGATaGTTCCAGAGCTTCCAAACC +
Preference number: 4 (lower is better)
Translates to: HTCSLTPWLRKEHVHRGGWASPG*FQSFQT
Trigger: GGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCA...GCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTAGCAGGTATGTGGGGGTaGAGCTCTCAGCTCTATCAC +
Preference number: 4 (lower is better)
Translates to: DGVSPCCPAFLPPRLSKVAGMWG*SSQLYH
Trigger: GTGATAGAGCTGAGAGCTCCACCCCCACATACCTGC...TACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTGGGTGGCAGGTATGTaGGGGTGGAGCTCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: HSKRSGGLYFTPAHSLHGWVAGM*GWSSQL
Trigger: GAGCTGAGAGCTCCACCCCCACATACCTGCCACCCA...GCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGGGCTGGCCAGGTGGGTaGCAGGTATGTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSGGLYFTPAHSLHGLEKGWPGG*QVCGGG
Trigger: TCCACCCCCACATACCTGCCACCCACCTGGCCAGCC...CTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCTGCCCCACCCCTCGCTaGAAATGCCTGTCCCGATAT +
Preference number: 4 (lower is better)
Translates to: RHEPPHTPLVSPMPVSSSCPTPR*KCLSRY
Trigger: ATATCGGGACAGGCATTTCCAGCGAGGGGTGGGGCA...GCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CACCCTCACTCCAACAGAAGCCACAGGACCCCCGAGAACAACTTGAATGTTAGCCTGGACACCGCTGCATaGCAGGGTGGGTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: HPHSNRSHRTPENNLNVSLDTAA*QGGCSL
Trigger: CAGGCTACACCCACCCTGCCATGCAGCGGTGTCCAG...GCTAACATTCAAGTTGTTCTCGGGGGTCCTGTGGCTTCTGTTGGAGTGAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGCAGCAGCAGGGCGGTaGGAACGGCTGCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKAAAGR*ERLHLH
Trigger: GTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGCTGC...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTCTTTAGACAAGGTTTTTaGAGTGCAGTCGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: QAEAFSSVGALGPTQDPLFRQGF*SAVGHS
Trigger: GCTGTGACCGACTGCACTCCAAAAACCTTGTCTAAA...GAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCACATCCCATCCTGTGTaGCATCCCCACCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HSKRSGGLYFTPAHSLHGTSHPV*HPHPCL
Trigger: GAGGCAGGGGTGGGGATGCCACACAGGATGGGATGT...GCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp ATCGTAAGTCCAGTCCTCAAACAGGAGCCGAGGCACTATGTGCAGGCCCTTGGCCCACACTCTCAGCTTTaGGGTCCGTCACCACCAAAC +
Preference number: 4 (lower is better)
Translates to: IVSPVLKQEPRHYVQALGPHSQL*GPSPPN
Trigger: GTTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGG...GCCAAGGGCCTGCACATAGTGCCTCGGCTCCTGTTTGAGGACTGGACTTACGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR TCA 90 bp GCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCCCACACTCTCAGCTTTaGGGTCCGTCACCACCAAAC +
Preference number: 4 (lower is better)
Translates to: AIEMLVLCHLDHGLAQLLPHSQL*GPSPPN
Trigger: GTTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGG...GAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR TCA 90 bp TGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCAGGCTGTTCCATGGAGTaGCATAGCCCAGTACATCCC +
Preference number: 4 (lower is better)
Translates to: CCPAFLPPRLSKVLGLQAGCSME*HSPVHP
Trigger: GGGATGTACTGGGCTATGTCACTCCATGGAACAGCC...TGCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp CCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTGGCTGTTCCATGGAGTaGCATAGCCCAGTACATCCC +
Preference number: 4 (lower is better)
Translates to: PPPRSHRNAGSLPPGPRSGCSME*HSPVHP
Trigger: GGGATGTACTGGGCTATGTCACTCCATGGAACAGCC...AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR TCA 90 bp GAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGCGGGTGAGATCTGTGTaGACTTGCTCCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: EPPHTPLVSPMPVSSSSRRVRSV*TCSQRP
Trigger: AGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCG...CCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACCGGGTGAGATCTGTGTaGACTTGCTCCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHRVRSV*TCSQRP
Trigger: AGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCG...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTCTGCAGCCAGACGGGTaGGATCTGTGTGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPLQPDG*DLCELA
Trigger: AGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAG...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp AGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGCTGCAGCCAGACGGGTaGGATCTGTGTGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: RPPPRSHRNAGSLPPGPRLQPDG*DLCELA
Trigger: AGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAG...CCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR TCA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGACCCTGGCCACAGGGATaGCGGTCAGTTCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGPWPQG*RSVQVG
Trigger: CCCAACCTGAACTGACCGTCATCCCTGTGGCCAGGG...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp AGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCGGGGTCCAGAGGGCTaGATGTCAGGGAGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: RPVFHTCSLTPWLRKEHVRGPEG*MSGRPD
Trigger: GTCCGGCCTCCCTGACATGCAGCCCTCTGGACCCCG...GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000528581.5
CDS-3UTR GCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGTCTGTCCCGGGCCTTTaGCGAGCAGTAGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWSVPGL*RAVAAM
Trigger: CATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGA...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATCTTCTGTCCCGGGCCTTTaGCGAGCAGTAGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: RNAGSLPPGPRSCSAPLSSVPGL*RAVAAM
Trigger: CATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGA...AGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR GCA 90 bp TACAGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCCGAGGCACTATGTaGAGGCCCTTGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: YRHEPPHTPLVSPMPVSSSRGTM*RPLACF
Trigger: GAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCT...GCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATAGCCGAGGCACTATGTaGAGGCCCTTGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNSRGTM*RPLACF
Trigger: GAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCT...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp AACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCCTGGACCACGGTCTTaGTCAGCTCCTCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: NRRTHHLYLLCPCQAAAGPGPRS*SAPLSH
Trigger: ATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGG...CCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp ACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGAAATGCTGGTTCTTTaGCACCTGGACCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: TAAHTTCISYARVKQQQGEMLVL*HLDHGL
Trigger: AAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTC...GCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CTGCTCAAACTCCTTGTGCGTGAACATGCCCAGCTGGTCGGTCCCGGGGGTGATGAAATGCTGGTTCTTTaGCACCTGGACCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: LLKLLVREHAQLVGPGGDEMLVL*HLDHGL
Trigger: AAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTC...ATCACCCCCGGGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR GCA 90 bp ATCCAGCACGGGGGCCAGCTGCTCAAACTCCTTGTGCGTGAACATGCCCAGCTGACGAAGCCATCGAAATaGTGGTTCTTTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: IQHGGQLLKLLVREHAQLTKPSK*WFFATW
Trigger: CCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGT...CAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR GCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACAGCAGCCGGGCCTGGTaGAGAGCCTCGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHSSRAW*RASAKW
Trigger: CCACTTGGCCGAGGCTCTGCACCAGGCCCGGCTGCT...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGAGCACGGGGGCCAGCTaGTCAAACTCCTTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWSTGAS*SNSLCV
Trigger: CACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCT...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCATTGTACTCGAAGAAGTaGTCTGAGGCCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAALYSKK*SEAWLS
Trigger: GGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAA...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp ACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTTGTACTCGAAGAAGTaGTCTGAGGCCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TGFHHVAQRSSRHGFPKYLYSKK*SEAWLS
Trigger: GGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAA...GTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GTAGAAGACGACGTGCCTCCCACTGCGGCTCTTCTTGTACTCGAAGAAGTGCTCCGACGTGCCTCCCACTaGGGCTCTTCTTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: VEDDVPPTAALLVLEEVLRRASH*GSSCTR
Trigger: TCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCG...GAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCGTCTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR GCA 90 bp CTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCCAGCCCCTGCACCCTTaGCGTGCTGGACTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: LYFTPAHSLHGLEKNTSTQPLHP*RAGLGG
Trigger: CCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTG...GGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTACATGTACCCACCTATaGCCTCTACTGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: RGFTMLPSVPPATAFQSTTCTHL*PLLPTS
Trigger: TGAGGTGGGCAGTAGAGGGCATAGGTGGGTACATGT...AGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp ATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCTTTCTCAAGTGTGGGTaGCTTGGGTCCGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: MLPSVPPATAFQSTGITGFLKCG*LGSDPG
Trigger: TCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAA...GCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp CCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGCTCACTTGTATCTCCTATaGCCGTGTCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PLVSPMPVSSSSRAVGTAHLYLL*PCQAAA
Trigger: TGCTGCTGCTTGACACGGGCATAGGAGATACAAGTG...AGCCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTAGCCATGGCTGTTCCATaGAGTGACATAGCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: DGVSPCCPAFLPPRLSKVAMAVP*SDIAQY
Trigger: GTACTGGGCTATGTCACTCCATGGAACAGCCATGGC...TACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGCTAAGCCATCGAAATGCTaGTTCTTTGCCACCTGGACC +
Preference number: 4 (lower is better)
Translates to: PLVSPMPVSSSSRAVGTAKPSKC*FFATWT
Trigger: GGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTT...AGCCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACCCACATCCAGCAAGCCATCGAAATGCTaGTTCTTTGCCACCTGGACC +
Preference number: 4 (lower is better)
Translates to: SRSGRVRDGSRASKPTSSKPSKC*FFATWT
Trigger: GGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTT...GCTGGATGTGGGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp AGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTTCTGGCTTAGCAGCTaGTTCCAGACCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: RPPPRSHRNAGSLPPGPRFWLSS*FQTSTT
Trigger: CGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAA...CCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR CCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATAGAGCCTCGGCCAAGTaGGTGAGCATGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNRASAK*VSMWMR
Trigger: CCTCATCCACATGCTCACCCACTTGGCCGAGGCTCT...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp TTCCAGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCAGAGCCTCGGCCAAGTaGGTGAGCATGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: FQTSTTKPSKCWFFATWTRASAK*VSMWMR
Trigger: CCTCATCCACATGCTCACCCACTTGGCCGAGGCTCT...GGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR CCA 90 bp CGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGTTCGGGTCCAGGACCTaGACGCAGGCTCGAACCCAG +
Preference number: 4 (lower is better)
Translates to: RSGGLYFTPAHSLHGLEKFGSRT*TQARTQ
Trigger: CTGGGTTCGAGCCTGCGTCCAGGTCCTGGACCCGAA...CTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCTTTTGCTTCGCCACTTaGACTTCGGGTCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPFCFAT*TSGPGP
Trigger: AGGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAA...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCTGGTCCTTCAGTGTCTaGATGTACCTGGCCCCGACA +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEAWSFSV*MYLAPT
Trigger: TGTCGGGGCCAGGTACATCCAGACACTGAAGGACCA...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGTGCTCACTCACTCCATaGCTTAGAAAAGAACACGTC +
Preference number: 4 (lower is better)
Translates to: LTSRRRLSQVWVPWVRPRCSLTP*LRKEHV
Trigger: GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA...CCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGCTCCCGTCCTGAGGCGGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGATCACAGCAAACGGAGTaGAGGCCTGTATTTCACACC +
Preference number: 4 (lower is better)
Translates to: SSRPEAAELSQGPGPVSRSQQTE*RPVFHT
Trigger: GGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA...TCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAGGACGGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534207.5
CDS-3UTR CCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAAGCCAGGCTGTCCTGGTaGGGCAGGTACTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKEARLSW*GRYCGP
Trigger: GGGCCCACAGTACCTGCCCCACCAGGACAGCCTGGC...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCGCAGGTATGTGGGGGTaGAGCTCTCAGCTCTATCAC +
Preference number: 4 (lower is better)
Translates to: HTCSLTPWLRKEHVHRGGAGMWG*SSQLYH
Trigger: GTGATAGAGCTGAGAGCTCCACCCCCACATACCTGC...GCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGTGGGTGGCAGGTATGTaGGGGTGGAGCTCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWWVAGM*GWSSQL
Trigger: GAGCTGAGAGCTCCACCCCCACATACCTGCCACCCA...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACGGCCTCCCCAGAGCCTaGACACCGCTGCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNGLPRA*TPLHGR
Trigger: CCTGCCATGCAGCGGTGTCCAGGCTCTGGGGAGGCC...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp AGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTACCAGCTCCCGTCCTGTaGAGGAGACCCCACCATGCT +
Preference number: 4 (lower is better)
Translates to: SKRSGGLYFTPAHSLHGLPAPVL*RRPHHA
Trigger: AGCATGGTGGGGTCTCCTCCACAGGACGGGAGCTGG...TAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGCTGCACCTGCACTGTaGCAGCTCGCAGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: YFTPAHSLHGLEKNTSTAAAPAL*QLAGLP
Trigger: AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGC...CGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGATTTAGACAAGGTTTTTaGAGTGCAGTCGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: ASLTSRRRLSQVWVPWVRFRQGF*SAVGHS
Trigger: GCTGTGACCGACTGCACTCCAAAAACCTTGTCTAAA...TCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGACATCCCATCCTGTGTaGCATCCCCACCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWTSHPV*HPHPCL
Trigger: GAGGCAGGGGTGGGGATGCCACACAGGATGGGATGT...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGGGTGAGGGTTGTGTaGGGACCCTGGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRGVRVV*GPWPQG
Trigger: TCCCTGTGGCCAGGGTCCCCACACAACCCTCACCCC...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp CAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTGTGAACATGCCCAGCTaGTCGGTCACGCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QQTEWRPVFHTCSLTPWLVNMPS*SVTRFW
Trigger: CCAGAAGCGCGTGACCGACCAGCTGGGCATGTTCAC...AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429789.6
CDS-3UTR CCA 90 bp CTGCTCAAACTCCTTGTGCGTGAACATGCCCAGCTGGTCGGTCCCGGGGGTGATACTCTTTTCAGCCTGTaGGGCAAGCACAGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: LLKLLVREHAQLVGPGGDTLFSL*GKHSQA
Trigger: TGCTTGACTGTGCTTGCCCCACAGGCTGAAAAGAGT...ATCACCCCCGGGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR TCA 90 bp CAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTTTTGACAGGGTAGTGTaGACAGGGCTGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QQTEWRPVFHTCSLTPWLFDRVV*TGLQAR
Trigger: CCTGGCCTGCAGCCCTGTTCACACTACCCTGTCAAA...AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCGGCTTATCTGAAAACTaGCTCTTCTCCAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRGLSEN*LFSSSV
Trigger: GACGCTGCTGGAGAAGAGTCAGTTTTCAGATAAGCC...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
CDS-3UTR TCA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGTCCCAAAGACCTTGGTaGCATCGTAGCCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMSQRPW*HRSHGC
Trigger: ACAGCCATGGCTACGATGTCACCAAGGTCTTTGGGA...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp CACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGGGTGAGATCTGTGTaGACTTGCTCCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: HTCSLTPWLRKEHVHRGGRVRSV*TCSQRP
Trigger: AGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCG...GCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCACCATACCATAGAAGTTaGGCCCCAGGAGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAAPYHRS*APGGFC
Trigger: GCAAAATCCTCCTGGGGCTCAACTTCTATGGTATGG...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCAGCCCAGAAAGGCCTaGGCCAGGCTGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHQPRKA*ARLSWW
Trigger: CCACCAGGACAGCCTGGCTCAGGCCTTTCTGGGCTG...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp TATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGTGGCTCTCTGCAGGTaGCACACGTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: YFTPAHSLHGLEKNTSTAVALCR*HTCCGW
Trigger: CCAGCCACAGCACGTGTGTCACCTGCAGAGAGCCAC...CGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp AGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCTGAGGCGGCAGAGCTaGGCCAAGGTCCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: RPVFHTCSLTPWLRKEHVLRRQS*AKVQDQ
Trigger: CTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAG...GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACTGTGGGACCCAGTGGTaGGGAGGGGAGTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHCGTQW*GGESSR
Trigger: CCGTGAGGACTCCCCTCCTCACCACTGGGTCCCACA...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGATCTGTCCCGGGCCTTTaGCGAGCAGTAGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGSVPGL*RAVAAM
Trigger: CATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGA...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGTGCAGGCCCTTGGCATaGTTCCTGACAGCTCGCATC +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWCRPLA*FLTARI
Trigger: GATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCA...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGTGCAGGCCCTTGGCATaGTTCCTGACAGCTCGCATC +
Preference number: 4 (lower is better)
Translates to: FTPAHSLHGLEKNTSTAECRPLA*FLTARI
Trigger: GATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCA...CTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp ACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTAGCCGAGGCACTATGTaGAGGCCCTTGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: TANGVEACISHLLTHSMASRGTM*RPLACF
Trigger: GAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCT...AGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp ATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCCCTGGACCACGGTCTTaGTCAGCTCCTCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: MLPSVPPATAFQSTGITGPGPRS*SAPLSH
Trigger: ATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGG...GCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCTGGACCACGGTCTTaGTCAGCTCCTCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMPGPRS*SAPLSH
Trigger: ATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGG...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAGAAATGCTGGTTCTTTaGCACCTGGACCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAAEMLVL*HLDHGL
Trigger: AAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTC...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp TCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCTGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLTPWLRKEHVHRGGRNACSNSL*VNMPSW
Trigger: CCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCA...GGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp GGGTTGGGTAGAAGACGACGTGCCTCCCACTGCGGCTCTTCTTGTACTCGAAGATGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLGRRRRASHCGSSCTRRCSNSL*VNMPSW
Trigger: CCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCA...TCTTCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCGTCTTCTACCCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR GCA 90 bp AGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPPPRSHRNAGSLPPGPRCSNSL*VNMPSW
Trigger: CCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCA...CCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR GCA 90 bp ACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAATTGTACTCGAAGAAGTaGTCTGAGGCCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: THHLYLLCPCQAAAGRWELYSKK*SEAWLS
Trigger: GGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAA...TTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR GCA 90 bp CTCTTCTTGTACTCGAAGAAGTGCTCTGAGGCCTGGCTGTCCCACACCATCCGGTTGTACTCGAAGAAGTaGTCTGAGGCCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LFLYSKKCSEAWLSHTIRLYSKK*SEAWLS
Trigger: GGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAA...CCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR GCA 90 bp AGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCGGGCAGAGCTGTCCCTaGGAGGGCCCTCGAATCCAG +
Preference number: 4 (lower is better)
Translates to: RPVFHTCSLTPWLRKEHVGQSCP*EGPRIQ
Trigger: CTGGATTCGAGGGCCCTCGCAGGGACAGCTCTGCCC...GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACGGGCAGAGCTGTCCCTaGGAGGGCCCTCGAATCCAG +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNGQSCP*EGPRIQ
Trigger: CTGGATTCGAGGGCCCTCGCAGGGACAGCTCTGCCC...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp AGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGGGGTTTCACCATGTTaGCCAGCGTTCCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SKRSGGLYFTPAHSLHGLGVSPC*PAFLPP
Trigger: TGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC...TAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTACCTTGGTCCACGTCGTaGAGGCCCGTGACCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SKRSGGLYFTPAHSLHGLPWSTS*RPVTSN
Trigger: GTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGG...TAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAAGCTCGCATCCACCCTTaGTCCACGTCGTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKEARIHP*STSWRP
Trigger: GGGCCTCCACGACGTGGACCAAGGGTGGATGCGAGC...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATTGGTTCTTTGCCACCTaGACCACGGTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNWFFAT*TTVLLS
Trigger: GCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCA...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAAAGCCATCGAAATGCTaGTTCTTTGCCACCTGGACC +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAAKPSKC*FFATWT
Trigger: GGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTT...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGAAGCCATCGAAATGCTaGTTCTTTGCCACCTGGACC +
Preference number: 4 (lower is better)
Translates to: GVSPCCPAFLPPRLSKVLKPSKC*FFATWT
Trigger: GGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTT...CAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGTTCGGGTCCAGGACCTaGACGCAGGCTCGAACCCAG +
Preference number: 4 (lower is better)
Translates to: YFTPAHSLHGLEKNTSTAFGSRT*TQARTQ
Trigger: CTGGGTTCGAGCCTGCGTCCAGGTCCTGGACCCGAA...CGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGTTTTGCTTCGCCACTTaGACTTCGGGTCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMFCFAT*TSGPGP
Trigger: AGGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAA...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATCAGGGACTTCAGGGTTaGGTAGAAGACGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNQGLQG*VEDDVP
Trigger: AGGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTG...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGGGATGGGGAGTCACATaGTGCCCAGGACCCCCGACT +
Preference number: 4 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTGWGVT*CPGPPT
Trigger: AGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCC...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGATGGGTGGCAGGTATGTaGGGGTGGAGCTCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGWVAGM*GWSSQL
Trigger: GAGCTGAGAGCTCCACCCCCACATACCTGCCACCCA...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACGCACCCTTGCCGTGCTaGACTCGGTGGGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHAPLPC*TRWGRL
Trigger: CAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGC...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACCAAGTGTGGGTGCCTTaGGTCCGACCCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: WRPVFHTCSLTPWLRKEHQVWVP*VRPRTP
Trigger: GGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTG...GTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACCAAGTGTGGGTGCCTTaGGTCCGACCCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNQVWVP*VRPRTP
Trigger: GGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTG...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACAGCAATTTAGACAAGGTTTTTaGAGTGCAGTCGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SHGAQDPRLRTAADPSQQFRQGF*SAVGHS
Trigger: GCTGTGACCGACTGCACTCCAAAAACCTTGTCTAAA...TTGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAAGTTGGAGGTGCCTGGTaGCTGTGGGGCCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKEVGGAW*LWGLWG
Trigger: GCCCCAAAGGCCCCACAGCCACCAGGCACCTCCAAC...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR CCA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGGTCCAGAGGGACCTaGTTGTTGGAGGTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGGSRGT*LLEVPG
Trigger: ACCAGGCACCTCCAACAACCAGGTCCCTCTGGACCC...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449825.5
3UTR CAA 72 bp CACTCCAACAGAAGCCACAGGACCCCCGAGAACAACTaGAATGTTAGCGTCAGCACCTCTGGGGAGACAAGG +
Preference number: 4 (lower is better)
Translates to: HSNRSHRTPENN*NVSVSTSGETR
Trigger: CCTTGTCTCCCCAGAGGTGCTGACGCTAACATTCAAGTTGTTCTCGGGGGTCCTGTGGCTTCTGTTGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCATTGCACCGGCTTATCTaGAAACTGACTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAALHRLI*KLTLLQ
Trigger: CTGGAGAAGAGTCAGTTTTCAGATAAGCCGGTGCAA...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
CDS-3UTR TCA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCTTGCACCGGCTTATCTaGAAACTGACTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPLHRLI*KLTLLQ
Trigger: CTGGAGAAGAGTCAGTTTTCAGATAAGCCGGTGCAA...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
CDS-3UTR TCA 90 bp ACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTCCACACTCTCAGCTTTaGGGTCCGTCACCACCAAAC +
Preference number: 4 (lower is better)
Translates to: TANGVEACISHLLTHSMAPHSQL*GPSPPN
Trigger: GTTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGG...AGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp ACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTGGCTGTTCCATGGAGTaGCATAGCCCAGTACATCCC +
Preference number: 4 (lower is better)
Translates to: TANGVEACISHLLTHSMAGCSME*HSPVHP
Trigger: GGGATGTACTGGGCTATGTCACTCCATGGAACAGCC...AGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACGTCGTGGAGGCCCGTaGCCTCAAACATCTCACGGC +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKERRGGP*PQTSHG
Trigger: GCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACG...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp TTGCTCAGCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGCGTCGTGGAGGCCCGTaGCCTCAAACATCTCACGGC +
Preference number: 4 (lower is better)
Translates to: LLSSSISSSLSKTFRKSSRRGGP*PQTSHG
Trigger: GCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACG...CGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR TCA 90 bp CAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGACCTTGGCATGCTTCCTaGCAGCTCGCATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: QTEWRPVFHTCSLTPWLRPWHAS*QLASTL
Trigger: AAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGG...TCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp ATCGTAGCCATGGCTGTTCCATGGAGTGACATAGCCCAGTACATCCCCAGCAAACCTTGGCATGCTTCCTaGCAGCTCGCATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: IVAMAVPWSDIAQYIPSKPWHAS*QLASTL
Trigger: AAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGG...TTTGCTGGGGATGTACTGGGCTATGTCACTCCATGGAACAGCCATGGCTACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR TCA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGACAAACTCCTTGTGCGTaGACATGCCCAGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGQTPCA*TCPAGR
Trigger: CCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTG...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTCCATACCATAGAAGTTaGGCCCCAGGAGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPPYHRS*APGGFC
Trigger: GCAAAATCCTCCTGGGGCTCAACTTCTATGGTATGG...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAACTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKLEEVL*GLAVPH
Trigger: GTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAG...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR TCA 90 bp CTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGTGGCTCTCTGCAGGTaGCACACGTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LYFTPAHSLHGLEKNTSTVALCR*HTCCGW
Trigger: CCAGCCACAGCACGTGTGTCACCTGCAGAGAGCCAC...GGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR TCA 90 bp GTCTTGCTCAGCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATTGCGGGAGGGAAACTaGGGCCGTGCAAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLLSSSISSSLSKTFRKSLREGN*GRARRR
Trigger: CCTCCTCCTTGCACGGCCTCAGTTTCCCTCCCGCAA...TGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR GCA 90 bp TGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCAACCAAACCCCGGTCTTaGACCGGCTTATCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: CCPAFLPPRLSKVLGLQATKPRS*TGLSEN
Trigger: GTTTTCAGATAAGCCGGTGCAAGACCGGGGTTTGGT...TGCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CAAAGTGTCTGTCCCGGGCCTTTGCCGAGCAGTAGCTGCGATGCTCAAGAACCAGAAATGCTGGTTCTTTaGCACCTGGACCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: QSVCPGPLPSSSCDAQEPEMLVL*HLDHGL
Trigger: AAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTC...TGGTTCTTGAGCATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR GCA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATTTGTACTCGAAGAAGTaGTCTGAGGCCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNLYSKK*SEAWLS
Trigger: GGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAA...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACAGCTCCAGCCGCACCTaGAGGGACTTCAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNSSSRT*RDFRVG
Trigger: CCCAACCCTGAAGTCCCTGCAGGTGCGGCTGGAGCT...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp GACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACCTGTATTTCACACCTaGTCACTCACTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: DGVSPCCPAFLPPRLSKVPVFHT*SLTPWL
Trigger: AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG...TACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp CCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCACCTGTATTTCACACCTaGTCACTCACTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: PAHSLHGLEKNTSTAEAAPVFHT*SLTPWL
Trigger: AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG...TGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp AGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCCCCCGACTGAGGACTaGAGCAGACCCGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: RPVFHTCSLTPWLRKEHVPPTED*SRPVTA
Trigger: TGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGG...GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp AAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAGGGTGGGTGTAGCCTaGCAGCCACATGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KRSGGLYFTPAHSLHGLERVGVA*QPHVLC
Trigger: GCAGAGGACATGTGGCTGGCAGGCTACACCCACCCT...TTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCACCTATGCCCTCTACTaGCCACCTCAGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRTYALY*PPQPCG
Trigger: CCCACAGGGCTGAGGTGGGCAGTAGAGGGCATAGGT...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp TTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGATGCTGATCTGGCAATaGCTAGCTCCAGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: FTPAHSLHGLEKNTSTAEMLIWQ*LAPGPH
Trigger: GTGTGGGCCTGGAGCTAGGCATTGCCAGATCAGCAT...CTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp TATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGCCTTGGTCCACGTCGTaGAGGCCCGTGACCTCAAAC +
Preference number: 4 (lower is better)
Translates to: YFTPAHSLHGLEKNTSTAPWSTS*RPVTSN
Trigger: GTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGG...CGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCAAGCCATCGAAATGCTaGTTCTTTGCCACCTGGACC +
Preference number: 4 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEAKPSKC*FFATWT
Trigger: GGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTT...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACTTCGGGTCCAGGACCTaGACGCAGGCTCGAACCCAG +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNFGSRT*TQARTQ
Trigger: CTGGGTTCGAGCCTGCGTCCAGGTCCTGGACCCGAA...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GTAGAAGACGACGTGCCTCCCACTGCGGCTCTTCTTGTACTCGAAGAAGTGCTCTTTTGCTTCGCCACTTaGACTTCGGGTCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: VEDDVPPTAALLVLEEVLFCFAT*TSGPGP
Trigger: AGGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAA...GAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCGTCTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR CCA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCAAGTGCTCTGAGGCCTaGCTGTCCCACACCATCCGG +
Preference number: 4 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRKCSEA*LSHTIR
Trigger: CCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTT...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTCAGGGACTTCAGGGTTaGGTAGAAGACGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: QQTEWRPVFHTCSLTPWLQGLQG*VEDDVP
Trigger: AGGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTG...AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGCTTGCTCACTCACTCCATaGCTTAGAAAAGAACACGTC +
Preference number: 4 (lower is better)
Translates to: PLVSPMPVSSSSRAVGTACSLTP*LRKEHV
Trigger: GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA...AGCCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCTCACAGCAAACGGAGTaGAGGCCTGTATTTCACACC +
Preference number: 4 (lower is better)
Translates to: RHEPPHTPLVSPMPVSSSSQQTE*RPVFHT
Trigger: GGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA...GCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp ATTACAGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAATGGGCGAGTCCGGGATaGTTCCAGAGCTTCCAAACC +
Preference number: 4 (lower is better)
Translates to: ITGMNRRTHHLYLLCPCQWASPG*FQSFQT
Trigger: GGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCA...TTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCCCTCGAATCCAGGAGTaGGCGAGTCCGGGATGGTTC +
Preference number: 4 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRPRIQE*ASPGWF
Trigger: GAACCATCCCGGACTCGCCCACTCCTGGATTCGAGG...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGGCAGGTATGTGGGGGTaGAGCTCTCAGCTCTATCAC +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWAGMWG*SSQLYH
Trigger: GTGATAGAGCTGAGAGCTCCACCCCCACATACCTGC...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAGGCTTTCTCAAGTGTaGGTGCCTTGGGTCCGACCC +
Preference number: 4 (lower is better)
Translates to: RSGGLYFTPAHSLHGLEKRLSQV*VPWVRP
Trigger: GGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCT...CTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTCCTTCTCTGTCTTCTaGGTGGAAATCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PPPRSHRNAGSLPPGPRSSFSVF*VEIWVR
Trigger: CCTGACCCAGATTTCCACCCAGAAGACAGAGAAGGA...AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR TCA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCTTTGACAGGGTAGTGTaGACAGGGCTGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRFDRVV*TGLQAR
Trigger: CCTGGCCTGCAGCCCTGTTCACACTACCCTGTCAAA...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp TCCAGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCAGGCTTATCTGAAAACTaGCTCTTCTCCAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SRPPPRSHRNAGSLPPGPGLSEN*LFSSSV
Trigger: GACGCTGCTGGAGAAGAGTCAGTTTTCAGATAAGCC...TGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR TCA 90 bp CGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATCTCGGGTGAGATCTGTGTaGACTTGCTCCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: RNAGSLPPGPRSCSAPLSRVRSV*TCSQRP
Trigger: AGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCG...AGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR TCA 90 bp CGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGCTGCAGCCAGACGGGTaGGATCTGTGTGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: RSGGLYFTPAHSLHGLEKLQPDG*DLCELA
Trigger: AGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAG...CTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGCAAACTCCTTGTGCGTaGACATGCCCAGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTQTPCA*TCPAGR
Trigger: CCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTG...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp TACAGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCCCATACCATAGAAGTTaGGCCCCAGGAGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: YRHEPPHTPLVSPMPVSSPYHRS*APGGFC
Trigger: GCAAAATCCTCCTGGGGCTCAACTTCTATGGTATGG...GCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
CDS-3UTR TCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKELEEVL*GLAVPH
Trigger: GTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAG...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp CTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCTCTGTCCCGGGCCTTTaGCGAGCAGTAGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: LYFTPAHSLHGLEKNTSTSVPGL*RAVAAM
Trigger: CATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGA...GGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACTCTGTCCCGGGCCTTTaGCGAGCAGTAGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHSVPGL*RAVAAM
Trigger: CATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGA...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAAGCCGAGGCACTATGTaGAGGCCCTTGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKSRGTM*RPLACF
Trigger: GAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCT...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCCTGGACCACGGTCTTaGTCAGCTCCTCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWPGPRS*SAPLSH
Trigger: ATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGG...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCACGAAGCCATCGAAATaGTGGTTCTTTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: HSKRSGGLYFTPAHSLHGTKPSK*WFFATW
Trigger: CCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGT...GCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp AGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCAGCACGGGGGCCAGCTaGTCAAACTCCTTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: RPVFHTCSLTPWLRKEHVSTGAS*SNSLCV
Trigger: CACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCT...GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp TTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGTTGTACTCGAAGAAGTaGTCTGAGGCCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FTPAHSLHGLEKNTSTAELYSKK*SEAWLS
Trigger: GGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAA...CTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGTTGTACTCGAAGAAGTaGTCTGAGGCCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWLYSKK*SEAWLS
Trigger: GGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAA...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR GCA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCCGACGTGCCTCCCACTaGGGCTCTTCTTGTACTCGA +
Preference number: 4 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRRRASH*GSSCTR
Trigger: TCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCG...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp TGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACCGTTGCCCCTCACCATaGTCCCTGATGTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WRPVFHTCSLTPWLRKEHRCPSP*SLMCPG
Trigger: GCCTGGACACATCAGGGAGCATGGTGAGGGGCAACG...GTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCCCAAGATCGCGCCATTaGGCTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LYFTPAHSLHGLEKNTSTPRSRH*APAWAT
Trigger: TGTTGCCCAGGCTGGAGCGCAATGGCGCGATCTTGG...GGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACCCTTGGTCCACGTCGTaGAGGCCCGTGACCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNPWSTS*RPVTSN
Trigger: GTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGG...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp TTAGCAGCTGGTTCCAGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGTGGTTCTTTGCCACCTaGACCACGGTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LAAGSRPPPRSHRNAGSLWFFAT*TTVLLS
Trigger: GCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCA...CAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CCA 90 bp CGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGTTCTGGCTTAGCAGCTaGTTCCAGACCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: RSGGLYFTPAHSLHGLEKFWLSS*FQTSTT
Trigger: CGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAA...CTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACAGGCCCACGCGCTTCTaGCTTAGCAGCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNRPTRF*LSSWFQ
Trigger: CTGGAACCAGCTGCTAAGCCAGAAGCGCGTGGGCCT...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGAAGTGGGTGAGCATGTaGATGAGGCCCACGCGCTTC +
Preference number: 4 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTKWVSM*MRPTRF
Trigger: GAAGCGCGTGGGCCTCATCCACATGCTCACCCACTT...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCAGAGCCTCGGCCAAGTaGGTGAGCATGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRRASAK*VSMWMR
Trigger: CCTCATCCACATGCTCACCCACTTGGCCGAGGCTCT...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp TATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGTGTCTGGATGTACCTaGCCCCGACAACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: YFTPAHSLHGLEKNTSTAVSGCT*PRQQAH
Trigger: GTGAGCCTGTTGTCGGGGCCAGGTACATCCAGACAC...CGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp ATTACAGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAACAGGGACTTCAGGGTTaGGTAGAAGACGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: ITGMNRRTHHLYLLCPCQQGLQG*VEDDVP
Trigger: AGGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTG...TTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CCA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCTGCTCACTCACTCCATaGCTTAGAAAAGAACACGTC +
Preference number: 4 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRCSLTP*LRKEHV
Trigger: GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGTGCTCACTCACTCCATaGCTTAGAAAAGAACACGTC +
Preference number: 4 (lower is better)
Translates to: EPPHTPLVSPMPVSSSSRCSLTP*LRKEHV
Trigger: GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA...CCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCTGGGTGGCAGGTATGTaGGGGTGGAGCTCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LYFTPAHSLHGLEKNTSTWVAGM*GWSSQL
Trigger: GAGCTGAGAGCTCCACCCCCACATACCTGCCACCCA...GGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACGTGGGGACGTCTGGGTaGCTCTCTGCAGGTGACACA +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHVGTSG*LSAGDT
Trigger: TGTGTCACCTGCAGAGAGCCACCCAGACGTCCCCAC...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAAGGGCCACCAGGCCTTaGCTCATGATGCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGRATRP*LMMPPN
Trigger: ATTTGGAGGCATCATGAGCCAAGGCCTGGTGGCCCT...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CCA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCAGGCTTTCTCAAGTGTaGGTGCCTTGGGTCCGACCC +
Preference number: 4 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRRLSQV*VPWVRP
Trigger: GGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCT...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCGGCCCTTCCCAACAGTaGCAGCCTCGTGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: RPVFHTCSLTPWLRKEHVGPSQQ*QPRDSV
Trigger: GACAGAGTCACGAGGCTGCCACTGTTGGGAAGGGCC...GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR TCA 90 bp CTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCTTTGACAGGGTAGTGTaGACAGGGCTGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LYFTPAHSLHGLEKNTSTFDRVV*TGLQAR
Trigger: CCTGGCCTGCAGCCCTGTTCACACTACCCTGTCAAA...GGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp TATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGCCACACTCTCAGCTTTaGGGTCCGTCACCACCAAAC +
Preference number: 4 (lower is better)
Translates to: YFTPAHSLHGLEKNTSTAPHSQL*GPSPPN
Trigger: GTTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGG...CGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGGCTGTTCCATGGAGTaGCATAGCCCAGTACATCCC +
Preference number: 4 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKGCSME*HSPVHP
Trigger: GGGATGTACTGGGCTATGTCACTCCATGGAACAGCC...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp ACGGTCTTGCTCAGCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAACTGCAGCCAGACGGGTaGGATCTGTGTGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: TVLLSSSISSSLSKTFRKLQPDG*DLCELA
Trigger: AGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAG...TTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR TCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACCCTTGGCATGCTTCCTaGCAGCTCGCATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNPWHAS*QLASTL
Trigger: AAGGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGG...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACAAACTCCTTGTGCGTaGACATGCCCAGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKEQTPCA*TCPAGR
Trigger: CCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTG...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACCAAACTCCTTGTGCGTaGACATGCCCAGCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNQTPCA*TCPAGR
Trigger: CCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTG...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GGTTGGGTAGAAGACGACGTGCCTCCCACTGCGGCTCTTCTTGTACTCGAAGAAATGTACCATAGAAGTTaGGCCCCAGGAGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: GWVEDDVPPTAALLVLEEMYHRS*APGGFC
Trigger: GCAAAATCCTCCTGGGGCTCAACTTCTATGGTACAT...TTCTTCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTCGTCTTCTACCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR GCA 90 bp TCCGGAAATCATCGTAAGTCCAGTCCTCAAACAGGAGCCGAGGCACTATGTGCACCTGGACCACGGTCTTaGTCAGCTCCTCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: SGNHRKSSPQTGAEALCAPGPRS*SAPLSH
Trigger: ATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGG...TGCACATAGTGCCTCGGCTCCTGTTTGAGGACTGGACTTACGATGATTTCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR GCA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGACCTGGACCACGGTCTTaGTCAGCTCCTCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGPGPRS*SAPLSH
Trigger: ATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGG...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGGAAATGCTGGTTCTTTaGCACCTGGACCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWEMLVL*HLDHGL
Trigger: AAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTC...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTACGAAGCCATCGAAATaGTGGTTCTTTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: QQTEWRPVFHTCSLTPWLTKPSK*WFFATW
Trigger: CCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGT...AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp CGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATCTACGAAGCCATCGAAATaGTGGTTCTTTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: RNAGSLPPGPRSCSAPLSTKPSK*WFFATW
Trigger: CCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGT...AGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR GCA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGCCCCAGGAGGATTTTaGTTCGCCACTTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKAPGGF*FATWTS
Trigger: CGAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGC...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGCCCCAGGAGGATTTTaGTTCGCCACTTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRAPGGF*FATWTS
Trigger: CGAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGC...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAATGCTGATCTGGCAATaGCTAGCTCCAGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKMLIWQ*LAPGPH
Trigger: GTGTGGGCCTGGAGCTAGGCATTGCCAGATCAGCAT...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACGGGCGACTCCTCATTTaGAGAGTCAGCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNGRLLI*RVSTGR
Trigger: CCTGCCTGTGCTGACTCTGCAAATGAGGAGTCGCCC...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR CCA 90 bp CAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAGCCATGGCTGTTCCATaGAGTGACATAGCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: QTEWRPVFHTCSLTPWLRAMAVP*SDIAQY
Trigger: GTACTGGGCTATGTCACTCCATGGAACAGCCATGGC...TCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCTGGTTCTTTGCCACCTaGACCACGGTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLYFTPAHSLHGLEKNTSWFFAT*TTVLLS
Trigger: GCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCA...GGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTGGTTCTTTGCCACCTaGACCACGGTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTWFFAT*TTVLLS
Trigger: GCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCA...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAAAAGTGGGTGAGCATGTaGATGAGGCCCACGCGCTTC +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKEKWVSM*MRPTRF
Trigger: GAAGCGCGTGGGCCTCATCCACATGCTCACCCACTT...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAAAGAGCCTCGGCCAAGTaGGTGAGCATGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKERASAK*VSMWMR
Trigger: CCTCATCCACATGCTCACCCACTTGGCCGAGGCTCT...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp CTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCAGAGCCTCGGCCAAGTaGGTGAGCATGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LYFTPAHSLHGLEKNTSTRASAK*VSMWMR
Trigger: CCTCATCCACATGCTCACCCACTTGGCCGAGGCTCT...GGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp CAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGATTTTGCTTCGCCACTTaGACTTCGGGTCCAGGACCT +
Preference number: 4 (lower is better)
Translates to: QTEWRPVFHTCSLTPWLRFCFAT*TSGPGP
Trigger: AGGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAA...TCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACGCTCACGGGCATCCTTaGAGGTCGCGTAGTCCATAC +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHAHGHP*RSRSPY
Trigger: GTATGGACTACGCGACCTCCAAGGATGCCCGTGAGC...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp TATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGCAGGGACTTCAGGGTTaGGTAGAAGACGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: YFTPAHSLHGLEKNTSTAQGLQG*VEDDVP
Trigger: AGGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTG...CGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGTGCTCACTCACTCCATaGCTTAGAAAAGAACACGTC +
Preference number: 4 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMCSLTP*LRKEHV
Trigger: GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGTCACAGCAAACGGAGTaGAGGCCTGTATTTCACACC +
Preference number: 4 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWSQQTE*RPVFHT
Trigger: GGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp ACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTCACAGCAAACGGAGTaGAGGCCTGTATTTCACACC +
Preference number: 4 (lower is better)
Translates to: TANGVEACISHLLTHSMASQQTE*RPVFHT
Trigger: GGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA...AGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp CTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCTCGGTCACGCGCTTCTaGCTTAGCAGCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LYFTPAHSLHGLEKNTSTSVTRF*LSSWFQ
Trigger: CTGGAACCAGCTGCTAAGCCAGAAGCGCGTGACCGA...GGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429789.6
CDS-3UTR CCA 90 bp CCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGTAAGTCCAGTTCTCTGTCTTCTGGGTaGAAATCCGCCCGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: PLSHPHCLRRSGNHRKSSSLSSG*KSARRR
Trigger: GCGACGCCGGGCGGATTTCCACCCAGAAGACAGAGA...ACTGGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR CCA 90 bp GCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGTAAGTCCTCCTTCTCTGTCTTCTaGGTGGAAATCCGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: APLSHPHCLRRSGNHRKSSFSVF*VEIRPA
Trigger: CGCCGGGCGGATTTCCACCCAGAAGACAGAGAAGGA...GGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR CCA 90 bp ATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATTCTCTGTCTTCTGGGTaGAAATCTGGGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: IEMLVLCHLDHGLAQLLYSLSSG*KSGSGR
Trigger: CCTCCCTGACCCAGATTTCCACCCAGAAGACAGAGA...ATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR TCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACGGCTGTTCCATGGAGTaGCATAGCCCAGTACATCCC +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHGCSME*HSPVHP
Trigger: GGGATGTACTGGGCTATGTCACTCCATGGAACAGCC...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp TATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGTCCCAAAGACCTTGGTaGCATCGTAGCCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: YFTPAHSLHGLEKNTSTASQRPW*HRSHGC
Trigger: ACAGCCATGGCTACGATGTCACCAAGGTCTTTGGGA...CGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGCGGGTGAGATCTGTGTaGACTTGCTCCCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTRVRSV*TCSQRP
Trigger: AGGTCTTTGGGAGCAAGTTCACACAGATCTCACCCG...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACTGCAGCCAGACGGGTaGGATCTGTGTGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKELQPDG*DLCELA
Trigger: AGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAG...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp TGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACCTGCAGCCAGACGGGTaGGATCTGTGTGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: WRPVFHTCSLTPWLRKEHLQPDG*DLCELA
Trigger: AGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAG...GTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCCCCCCGAGAACAACTTaGATGTTAGCGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: GLYFTPAHSLHGLEKNTSPPRTT*MLASAP
Trigger: AGGTGCTGACGCTAACATTCAAGTTGTTCTCGGGGG...GGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp CAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAACCAAACCCCGGTCTTaGACCGGCTTATCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: QTEWRPVFHTCSLTPWLRTKPRS*TGLSEN
Trigger: GTTTTCAGATAAGCCGGTGCAAGACCGGGGTTTGGT...TCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp CCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGTAAGTCCAGTTGCAGGCCCTTGGCATaGTTCCTGACAGCTCGCATC +
Preference number: 4 (lower is better)
Translates to: PLSHPHCLRRSGNHRKSSCRPLA*FLTARI
Trigger: GATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCA...ACTGGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR GCA 90 bp CAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAGAAATGCTGGTTCTTTaGCACCTGGACCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: QTEWRPVFHTCSLTPWLREMLVL*HLDHGL
Trigger: AAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTC...TCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp AAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAATGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KRSGGLYFTPAHSLHGLECSNSL*VNMPSW
Trigger: CCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCA...TTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAAGCCCCAGGAGGATTTTaGTTCGCCACTTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKEAPGGF*FATWTS
Trigger: CGAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGC...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGACATGTACCCACCTATaGCCTCTACTGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTTCTHL*PLLPTS
Trigger: TGAGGTGGGCAGTAGAGGGCATAGGTGGGTACATGT...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR GCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAATTCTGGGTGGAAATCTaGATGTCAGGGAGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKEFWVEI*MSGRPD
Trigger: GTCCGGCCTCCCTGACATGCAGATTTCCACCCAGAA...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436108.6
CDS-3UTR CCA 90 bp TATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGCCATGGCTGTTCCATaGAGTGACATAGCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: YFTPAHSLHGLEKNTSTAAMAVP*SDIAQY
Trigger: GTACTGGGCTATGTCACTCCATGGAACAGCCATGGC...CGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp AGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCTGGTTCTTTGCCACCTaGACCACGGTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RPVFHTCSLTPWLRKEHVWFFAT*TTVLLS
Trigger: GCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCA...GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACTGGTTCTTTGCCACCTaGACCACGGTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNWFFAT*TTVLLS
Trigger: GCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCA...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CCA 90 bp TTGCTCAGCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGTGGTTCTTTGCCACCTaGACCACGGTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLSSSISSSLSKTFRKSSWFFAT*TTVLLS
Trigger: GCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCA...CGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CCA 90 bp CGTTCCGGAAATCATCGTAAGTCCAGTCCTCAAACAGGAGCCGAGGCACTATGTAAGCCATCGAAATGCTaGTTCTTTGCCACCTGGACC +
Preference number: 4 (lower is better)
Translates to: RSGNHRKSSPQTGAEALCKPSKC*FFATWT
Trigger: GGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTT...ACATAGTGCCTCGGCTCCTGTTTGAGGACTGGACTTACGATGATTTCCGGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR CCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACTGGTCCTTCAGTGTCTaGATGTACCTGGCCCCGACA +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNWSFSV*MYLAPT
Trigger: TGTCGGGGCCAGGTACATCCAGACACTGAAGGACCA...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACAGGGCCACCAGGCCTTaGCTCATGATGCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNRATRP*LMMPPN
Trigger: ATTTGGAGGCATCATGAGCCAAGGCCTGGTGGCCCT...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
3UTR CAA 72 bp TCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTaGCTCAGCTCCTCTATCTCATCCTCACTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: SKCWFFATWTTV*LSSSISSSLSK
Trigger: CTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR TCA 90 bp AAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAGGCTTATCTGAAAACTaGCTCTTCTCCAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: KRSGGLYFTPAHSLHGLEGLSEN*LFSSSV
Trigger: GACGCTGCTGGAGAAGAGTCAGTTTTCAGATAAGCC...TTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
CDS-3UTR TCA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGGCTTATCTGAAAACTaGCTCTTCTCCAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKGLSEN*LFSSSV
Trigger: GACGCTGCTGGAGAAGAGTCAGTTTTCAGATAAGCC...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
CDS-3UTR TCA 90 bp ATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATTTGCACCGGCTTATCTaGAAACTGACTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: IEMLVLCHLDHGLAQLLYLHRLI*KLTLLQ
Trigger: CTGGAGAAGAGTCAGTTTTCAGATAAGCCGGTGCAA...ATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR TCA 90 bp TGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACTCCCAAAGACCTTGGTaGCATCGTAGCCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: WRPVFHTCSLTPWLRKEHSQRPW*HRSHGC
Trigger: ACAGCCATGGCTACGATGTCACCAAGGTCTTTGGGA...GTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp TTGCTCAGCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGTCCCAAAGACCTTGGTaGCATCGTAGCCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLSSSISSSLSKTFRKSSSQRPW*HRSHGC
Trigger: ACAGCCATGGCTACGATGTCACCAAGGTCTTTGGGA...CGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR TCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACTCCCAAAGACCTTGGTaGCATCGTAGCCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHSQRPW*HRSHGC
Trigger: ACAGCCATGGCTACGATGTCACCAAGGTCTTTGGGA...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp AAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAACCATACCATAGAAGTTaGGCCCCAGGAGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: KRSGGLYFTPAHSLHGLEPYHRS*APGGFC
Trigger: GCAAAATCCTCCTGGGGCTCAACTTCTATGGTATGG...TTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp AGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCCCCCGAGAACAACTTaGATGTTAGCGTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: RPVFHTCSLTPWLRKEHVPPRTT*MLASAP
Trigger: AGGTGCTGACGCTAACATTCAAGTTGTTCTCGGGGG...GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR TCA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAATTGCACCGGCTTATCTaGAAACTGACTCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKELHRLI*KLTLGG
Trigger: GCCACCCAGAGTCAGTTTTCAGATAAGCCGGTGCAA...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACCCTGGACCACGGTCTTaGTCAGCTCCTCTATCTCAT +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNPGPRS*SAPLSH
Trigger: ATGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGG...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAAATGCTGGTTCTTTaGCACCTGGACCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKEMLVL*HLDHGL
Trigger: AAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTC...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp AAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAGAAATGCTGGTTCTTTaGCACCTGGACCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: KRSGGLYFTPAHSLHGLEEMLVL*HLDHGL
Trigger: AAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTC...TTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCACGAAGCCATCGAAATaGTGGTTCTTTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRTKPSK*WFFATW
Trigger: CCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGT...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAACGAAGCCATCGAAATaGTGGTTCTTTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKTKPSK*WFFATW
Trigger: CCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGT...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp TGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACTGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WRPVFHTCSLTPWLRKEHCSNSL*VNMPSW
Trigger: CCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCA...GTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp AGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTACCTGTATTTCACACCTaGTCACTCACTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: SKRSGGLYFTPAHSLHGLPVFHT*SLTPWL
Trigger: AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG...TAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAACACTTGTATCTCCTATaGCCGTGTCAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKHLYLL*PCQAAA
Trigger: TGCTGCTGCTTGACACGGGCATAGGAGATACAAGTG...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CCA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACGCCATGGCTGTTCCATaGAGTGACATAGCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNAMAVP*SDIAQY
Trigger: GTACTGGGCTATGTCACTCCATGGAACAGCCATGGC...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR TCA 90 bp GGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCTTGCACCGGCTTATCTaGAAACTGACTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLYFTPAHSLHGLEKNTSLHRLI*KLTLLQ
Trigger: CTGGAGAAGAGTCAGTTTTCAGATAAGCCGGTGCAA...GGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
CDS-3UTR TCA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCTTGCACCGGCTTATCTaGAAACTGACTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRLHRLI*KLTLLQ
Trigger: CTGGAGAAGAGTCAGTTTTCAGATAAGCCGGTGCAA...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
CDS-3UTR TCA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCCATACCATAGAAGTTaGGCCCCAGGAGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHPYHRS*APGGFC
Trigger: GCAAAATCCTCCTGGGGCTCAACTTCTATGGTATGG...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp AGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCACGAAGCCATCGAAATaGTGGTTCTTTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: RPVFHTCSLTPWLRKEHVTKPSK*WFFATW
Trigger: CCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGT...GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR GCA 90 bp AAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAACCTGTATTTCACACCTaGTCACTCACTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: KRSGGLYFTPAHSLHGLEPVFHT*SLTPWL
Trigger: AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG...TTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp AGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTATGCTCACTCACTCCATaGCTTAGAAAAGAACACGTC +
Preference number: 4 (lower is better)
Translates to: SKRSGGLYFTPAHSLHGLCSLTP*LRKEHV
Trigger: GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA...TAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR GCA 90 bp CTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCCCTGTATTTCACACCTaGTCACTCACTCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: LYFTPAHSLHGLEKNTSTPVFHT*SLTPWL
Trigger: AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG...GGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CCA 90 bp CCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGTAAGTCCAGTAAGCCATCGAAATGCTaGTTCTTTGCCACCTGGACC +
Preference number: 4 (lower is better)
Translates to: PLSHPHCLRRSGNHRKSSKPSKC*FFATWT
Trigger: GGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTT...ACTGGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CCA 90 bp GGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCTGCTCACTCACTCCATaGCTTAGAAAAGAACACGTC +
Preference number: 4 (lower is better)
Translates to: GLYFTPAHSLHGLEKNTSCSLTP*LRKEHV
Trigger: GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA...GGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS GCA 90 bp GAGGGCCGGGGTGGGTGTGGAGTGCCCTGGCGGAGGTCCAGGCTCTaGCCTGTAGGCCCAGGTCTGACCTGCCCTGAGGCCCTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: EGRGGCGVPWRRSRL*PVGPGLTCPEALLL
Trigger: AAGCAGGAGGGCCTCAGGGCAGGTCAGACCTGGGCCTACAGGGCAGAGCCTGGACCTCCGCCAGGGCACTCCACACCCACCCCGGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528154.1
CDS CCA 90 bp GTCCAACCTCGGGGTCCAGAGGGCCGGGGTGGGTGTGGAGTGCCCTaGCGGAGGTCCAGGCTCTGCCCTGTAGGCCCAGGTCTGACCTGC +
Preference number: 5 (lower is better)
Translates to: VQPRGPEGRGGCGVP*RRSRLCPVGPGLTC
Trigger: GCAGGTCAGACCTGGGCCTACAGGGCAGAGCCTGGACCTCCGCCAGGGCACTCCACACCCACCCCGGCCCTCTGGACCCCGAGGTTGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528154.1
CDS-3UTR CAA 90 bp GCAGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCTCAAGTGTGGGTGCCTaGGGTCCGACCCAGGACCCC +
Preference number: 5 (lower is better)
Translates to: AAGRWERLHLHCGSSQASSSVGA*GPTQDP
Trigger: GGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGA...GGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS CCA 90 bp GCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTaGGTCCGACCCAGGACCCCCTCCCCAGCTCCCGTCCTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: ASLTSRRRLSQVWVP*VRPRTPSPAPVLEQ
Trigger: CTGCTCTAGGACGGGAGCTGGGGAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529539.5
CDS-3UTR CAA 90 bp TGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTAGCTCGCATCCACCCTaGGTCCACGTCGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: CTLAVLDSVGTSGWLSAGSSHPP*VHVVEA
Trigger: GGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCT...ACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp AGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTGCAGGGACTTCAGGGTaGGGTAGAAGACGACGTGCC +
Preference number: 5 (lower is better)
Translates to: SRAVGTAAPALWQLAGLPAGTSG*GRRRRA
Trigger: GGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTGC...AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CAA 90 bp CGCTGGAAATGCCTGTCCCGATATGGCCCACGGGTCCTGCCGTTGCCCCTCACCGTCTGTCCCGGGCCTTaGCCGAGCAGTAGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: RWKCLSRYGPRVLPLPLTVCPGP*PSSSCD
Trigger: ATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGAC...GGTGAGGGGCAACGGCAGGACCCGTGGGCCATATCGGGACAGGCATTTCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp GGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGAGGGTGGGCCAGGCTCCTCCACGGGTCCTGCCGTaGCCCCTCACCATGCTCCCT +
Preference number: 5 (lower is better)
Translates to: GRAEPRSRTSFKRVGQAPPRVLP*PLTMLP
Trigger: AGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTGG...AGGAGCCTGGCCCACCCTCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp TCCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTCAAGTGTGGGTGCCTaGGGTCCGACCCAGGACCCC +
Preference number: 5 (lower is better)
Translates to: SSEPISRAAPAPLPCWTRSSVGA*GPTQDP
Trigger: GGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGA...CCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CAA 90 bp GCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGAGCCAAGATCGCGCCATaGCGCTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: ASLTSRRRLSQVWVPWVRAKIAP*RSSLGN
Trigger: GTTGCCCAGGCTGGAGCGCAATGGCGCGATCTTGGC...TCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454838.6
CDS-3UTR CAA 90 bp AGCAGGGCGGTGGGAACGGCTGCACCTGCACTGTGGCAGCTCGCAGGCCTCCCTACCTGGACCACGGTCTaGCTCAGCTCCTCTATCTCA +
Preference number: 5 (lower is better)
Translates to: SRAVGTAAPALWQLAGLPTWTTV*LSSSIS
Trigger: TGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGT...AGGGAGGCCTGCGAGCTGCCACAGTGCAGGTGCAGCCGTTCCCACCGCCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS CCA 90 bp CCCAGGAGGATTTTGCTTCGCCACTTGGACTTCGGGTCCAGGACCTaGACGCAGGCTCGAACCCAGGACAGGGGTGCATTAGGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PRRILLRHLDFGSRT*TQARTQDRGALGPG
Trigger: GCCTGGCCCTAATGCACCCCTGTCCTGGGTTCGAGCCTGCGTCCAGGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000524832.5
ENST00000526714.5
ENST00000528521.1
ENST00000528581.5
ENST00000531010.1
ENST00000531859.5
CDS CCA 90 bp TCCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTaGACTCGGTGGGGACGTCTGGGTGGCTCTCTAGAGCAGGTCGTA +
Preference number: 5 (lower is better)
Translates to: SSEPISRAAPAPLPC*TRWGRLGGSLEQVV
Trigger: TACGACCTGCTCTAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532909.5
CDS-3UTR CAA 90 bp TGGAGGCCCGTGACCTCAAACATCTCACGGCCACGTCTCTTCAGCTGCAGCCAGAGCTCGCATCCACCCTaGGTCCACGTCGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: WRPVTSNISRPRLFSCSQSSHPP*VHVVEA
Trigger: GGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCT...CTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR CAA 90 bp CTCGCAGGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGCAGGGACTTCAGGGTaGGGTAGAAGACGACGTGCC +
Preference number: 5 (lower is better)
Translates to: LAGLPDVQAEAFSSVGALAGTSG*GRRRRA
Trigger: GGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTGC...CAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCCTGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CAA 90 bp CGGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCCCACGGGTCCTGCCGTaGCCCCTCACCATGCTCCCT +
Preference number: 5 (lower is better)
Translates to: RSQLTAASTSSSDPPISAPRVLP*PLTMLP
Trigger: AGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTGG...GGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp GGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACAGAGGGCCACCAGGCCTaGGCTCATGATGCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: GVTWCPGPPTEDCSRPVTEGHQA*AHDASK
Trigger: TTTGGAGGCATCATGAGCCAAGGCCTGGTGGCCCTC...TGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp ACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCTCAAGTGTGGGTGCCTaGGGTCCGACCCAGGACCCC +
Preference number: 5 (lower is better)
Translates to: TAAHTTCISYARVKQQQGSSVGA*GPTQDP
Trigger: GGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGA...GCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS TCA 90 bp GACGTGCCTCCCACTGCGGCTCTTCTTGTACTCGAAGAAGTGCTCTaGGGCCTGGCTGTCCCACACCATCCGGGGCCTGTGGTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: DVPPTAALLVLEEVL*GLAVPHHPGPVVLQ
Trigger: CTGAAGGACCACAGGCCCCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGGGAGGCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000524538.1
ENST00000528521.1
ENST00000528581.5
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS CCA 90 bp CCCACACCATCCGGGGCCTGTGGTCCTTCAGTGTCTGGATGTACCTaGGGAGACCAGGATATGGATTTGGGAGCCCACCCAGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: PTPSGACGPSVSGCT*GDQDMDLGAHPAPP
Trigger: TGGGGGAGCTGGGTGGGCTCCCAAATCCATATCCTGGTCTCCCCAGGTACATCCAGACACTGAAGGACCACAGGCCCCGGATGGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524538.1
CDS CCA 90 bp GCCTGGCTGTCCCACACCATCCGGGGCCTGTGGTCCTTCAGTGTCTaGATGTACCTGGGGAGACCAGGATATGGATTTGGGAGCCCACCC +
Preference number: 5 (lower is better)
Translates to: AWLSHTIRGLWSFSV*MYLGRPGYGFGSPP
Trigger: GGGTGGGCTCCCAAATCCATATCCTGGTCTCCCCAGGTACATCCAGACACTGAAGGACCACAGGCCCCGGATGGTGTGGGACAGCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524538.1
CDS CCA 90 bp CCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTaGGGACGTCTGGGTGGCTCTCTAGAGCAGGTCGTAGAAGTAGTC +
Preference number: 5 (lower is better)
Translates to: PISRAAPAPLPCWTR*GRLGGSLEQVVEVV
Trigger: GACTACTTCTACGACCTGCTCTAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532909.5
CDS-3UTR CAA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCAGCTCGCATCCACCCTaGGTCCACGTCGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPSSHPP*VHVVEA
Trigger: GGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCT...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAGCTCGCATCCACCCTaGGTCCACGTCGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRSSHPP*VHVVEA
Trigger: GGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCT...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCGAAATGCTGGTTCTTaGCCACCTGGACCACGGTCT +
Preference number: 5 (lower is better)
Translates to: RPGGGFLKCGCLGSDPGPRNAGS*PPGPRS
Trigger: AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG...GGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp GCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACCCGCAGGGACTTCAGGGTaGGGTAGAAGACGACGTGCC +
Preference number: 5 (lower is better)
Translates to: ALESRSGRVRDGSRASKPAGTSG*GRRRRA
Trigger: GGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTGC...GGGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CAA 90 bp GACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTATCAAGTGTGGGTGCCTaGGGTCCGACCCAGGACCCC +
Preference number: 5 (lower is better)
Translates to: DGVSPCCPAFLPPRLSKVSSVGA*GPTQDP
Trigger: GGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGA...TACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CAA 90 bp GGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACACGCCGCACACACCACTaGTATCTCCTATGCCCGTGT +
Preference number: 5 (lower is better)
Translates to: GVTWCPGPPTEDCSRPVTRRTHH*YLLCPC
Trigger: ACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCG...TGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CAA 90 bp TGGGAGGGGCTCGAGCTCTCAGGGTGTCCCCCAGCTAGGACTCATCCAGGGCAGGACGGTCAGTTCAGGTaGGGGCATCTGATCCCCAAA +
Preference number: 5 (lower is better)
Translates to: WEGLELSGCPPARTHPGQDGQFR*GHLIPK
Trigger: TTTGGGGATCAGATGCCCCAACCTGAACTGACCGTC...CTGCCCTGGATGAGTCCTAGCTGGGGGACACCCTGAGAGCTCGAGCCCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp CCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGACCCAGGACCCCCTGACGGTCAGTTCAGGTaGGGGCATCTGATCCCCAAA +
Preference number: 5 (lower is better)
Translates to: PGGGFLKCGCLGSDPGPPDGQFR*GHLIPK
Trigger: TTTGGGGATCAGATGCCCCAACCTGAACTGACCGTC...AGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS GCA 90 bp AGGCTGAAACCATCCAGCACGGGGGCCAGCTGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGGTCGGTCACGCGCTTCTGGCTTAGC +
Preference number: 5 (lower is better)
Translates to: RLKPSSTGASCSNSL*VNMPSWSVTRFWLS
Trigger: GCTAAGCCAGAAGCGCGTGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGATGGTTTCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429789.6
CDS CCA 90 bp AAGAAGTGCTCTGAGGCCTGGCTGTCCCACACCATCCGGGGCCTGTaGTCCTTCAGTGTCTGGATGTACCTGGCCCCGACAACAGGCTCA +
Preference number: 5 (lower is better)
Translates to: KKCSEAWLSHTIRGL*SFSVWMYLAPTTGS
Trigger: TGAGCCTGTTGTCGGGGCCAGGTACATCCAGACACTGAAGGACCACAGGCCCCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000529539.5
ENST00000534207.5
CDS CCA 90 bp CTCCCACTGCGGCTCTTCTTGTACTCGAAGAAGTGCTCTGAGGCCTaGCTGTCCCACACCATCCGGGGCCTGTGGTCCTTCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: LPLRLFLYSKKCSEA*LSHTIRGLWSFSVW
Trigger: CCAGACACTGAAGGACCACAGGCCCCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000524538.1
ENST00000528521.1
ENST00000528581.5
ENST00000529539.5
ENST00000534207.5
CDS-3UTR CAA 90 bp GGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACAGCAAGCCAGAGGAGGTaGAAGAGTGTCCGCATGGTA +
Preference number: 5 (lower is better)
Translates to: GVTWCPGPPTEDCSRPVTASQRR*KSVRMV
Trigger: TACCATGCGGACACTCTTCAACCTCCTCTGGCTTGC...TGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323578.13
ENST00000449825.5
CDS-3UTR CAA 90 bp TGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTACCACACTCTCAGCTTaGAGGTCCGTCACCACCAAA +
Preference number: 5 (lower is better)
Translates to: CTLAVLDSVGTSGWLSAGTTLSA*RSVTTK
Trigger: TTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGGT...ACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCGTCTGTCCCGGGCCTTaGCCGAGCAGTAGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRVCPGP*PSSSCD
Trigger: ATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGAC...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp GACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTAGTCTGTCCCGGGCCTTaGCCGAGCAGTAGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: DGVSPCCPAFLPPRLSKVVCPGP*PSSSCD
Trigger: ATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGAC...TACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp AGGAGACCCCACCATGCTTCCTCACCACCGGCTGGAGATGTCCTGACCCCCTGCACTATGTGCAGGCCCTaGGCATGCTTCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: RRPHHASSPPAGDVLTPCTMCRP*ACFLTA
Trigger: AGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGT...GCAGGGGGTCAGGACATCTCCAGCCGGTGGTGAGGAAGCATGGTGGGGTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp ATGGTGACGAGGGGCAGGGGAACGAGGGCCACCAGGCCTTGGCTCATGATGCCTAGCTGCTCAAACTCCTaGTGCGTGAACATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: MVTRGRGTRATRPWLMMPSCSNS*CVNMPS
Trigger: GCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCT...AGGCATCATGAGCCAAGGCCTGGTGGCCCTCGTTCCCCTGCCCCTCGTCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp TCGAAGAAGTGCTCTGAGGCCTGGCTGTCCCACACCATCCGGGGCCTGTGGTCCATTTTGCTTCGCCACTaGGACTTCGGGTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: SKKCSEAWLSHTIRGLWSILLRH*DFGSRT
Trigger: GGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAAT...GGACCACAGGCCCCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR CAA 90 bp TCGAAGAAGTGCTCTGAGGCCTGGCTGTCCCACACCATCCGGGGCCTGTGGTCCAGCCCCAGGAGGATTTaGCTTCGCCACTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: SKKCSEAWLSHTIRGLWSSPRRI*LRHLDF
Trigger: GAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGCT...GGACCACAGGCCCCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR CAA 90 bp GGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTTGGGTCCGCCACTGCGGCTCTTCTaGTACTCGAAGAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: GLPDVQAEAFSSVGALGPPLRLF*YSKKCS
Trigger: AGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGG...CGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CAA 90 bp ATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCTCAAGTGTGGGTGCCTaGGGTCCGACCCAGGACCCC +
Preference number: 5 (lower is better)
Translates to: MLPSVPPATAFQSTGITGSSVGA*GPTQDP
Trigger: GGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGA...GCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS GCA 90 bp GCCAGCAGCCGGGCCTCAAACATCTCACGGCCACGTCTCTTCAGCTaGAGCCAGACGGGTGAGATCTGTGTGAACTTGCTCCCAAAGACC +
Preference number: 5 (lower is better)
Translates to: ASSRASNISRPRLFS*SQTGEICVNLLPKT
Trigger: GGTCTTTGGGAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTTGAGGCCCGGCTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531859.5
CDS-3UTR CAA 90 bp GAGGGCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAGCAAGCCAGAGGAGGTaGAAGAGTGTCCGCATGGTA +
Preference number: 5 (lower is better)
Translates to: EGPRIQEWASPGWFQSFQASQRR*KSVRMV
Trigger: TACCATGCGGACACTCTTCAACCTCCTCTGGCTTGC...TTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323578.13
ENST00000449825.5
CDS-3UTR CAA 90 bp CAAAGTGTCTGTCCCGGGCCTTTGCCGAGCAGTAGCTGCGATGCTCAAGAACCAGTCTGTCCCGGGCCTTaGCCGAGCAGTAGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: QSVCPGPLPSSSCDAQEPVCPGP*PSSSCD
Trigger: ATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGAC...TGGTTCTTGAGCATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR CAA 90 bp CAGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTGTCCCGGGCCTTaGCCGAGCAGTAGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: QTSTTKPSKCWFFATWTTVCPGP*PSSSCD
Trigger: ATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGAC...CGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CAA 90 bp CATCCACCCTTGGTCCACGTCGTGGAGGCCCGTGACCTCAAACATCTCACGGCCACCTGGACCACGGTCTaGCTCAGCTCCTCTATCTCA +
Preference number: 5 (lower is better)
Translates to: HPPLVHVVEARDLKHLTATWTTV*LSSSIS
Trigger: TGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGT...GGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGGTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR CAA 90 bp TCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCGTCACAGCAAAGCCCCAGGAGGATTTaGCTTCGCCACTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: SHGAQDPRLRTAADPSQQSPRRI*LRHLDF
Trigger: GAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGCT...TTGCTGTGACGGGTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp GAGGATGGGGAGTCACATGGTGCCCAGGACCCCCGACTGAGGACTGCAGCAGACCCACTGCGGCTCTTCTaGTACTCGAAGAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: EDGESHGAQDPRLRTAADPLRLF*YSKKCS
Trigger: AGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGG...GTCTGCTGCAGTCCTCAGTCGGGGGTCCTGGGCACCATGTGACTCCCCATCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CAA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACGCAGGGACTTCAGGGTaGGGTAGAAGACGACGTGCC +
Preference number: 5 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHAGTSG*GRRRRA
Trigger: GGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTGC...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CAA 90 bp GGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGCAGGGACTTCAGGGTaGGGTAGAAGACGACGTGCC +
Preference number: 5 (lower is better)
Translates to: GFHHVAQRSSRHGFPKYWAGTSG*GRRRRA
Trigger: GGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTGC...CCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CAA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCGCAGGGACTTCAGGGTaGGGTAGAAGACGACGTGCC +
Preference number: 5 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRAGTSG*GRRRRA
Trigger: GGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTGC...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS TCA 90 bp GGCCGGTGGGGTGAGGAGGCCTGCAGAGATGAGTGTTTCTGCTGCTaGCTGGATCCCTGCTTTAGGAGACCCCATGCCTTACCTGGGATA +
Preference number: 5 (lower is better)
Translates to: GRWGEEACRDECFCC*LDPCFRRPHALPGI
Trigger: TATCCCAGGTAAGGCATGGGGTCTCCTAAAGCAGGGATCCAGTCAGCAGCAGAAACACTCATCTCTGCAGGCCTCCTCACCCCACCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528154.1
CDS TCA 90 bp CAAACAGGAGCCGAGGCACTATGTGCAGGCCCTTGGCATGCTTCCTaGCAGCTCGCATCCACCACTCTTTTCAGCCTGTGGGGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: QTGAEALCAGPWHAS*QLASTTLFSLWGKH
Trigger: GTGCTTGCCCCACAGGCTGAAAAGAGTGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCTCCTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS CCA 90 bp AAGAAGTGCTCTGAGGCCTGGCTGTCCCACACCATCCGGGGCCTGTaGTCCTTCAGTGTCTGGATGTACCTGGGGAGACCAGGATATGGA +
Preference number: 5 (lower is better)
Translates to: KKCSEAWLSHTIRGL*SFSVWMYLGRPGYG
Trigger: TCCATATCCTGGTCTCCCCAGGTACATCCAGACACTGAAGGACCACAGGCCCCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524538.1
CDS-3UTR CAA 90 bp TGCACCCTTGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTGCAGGTTTTGAGGCGGCTTTTTaGGCATCTGACTTTGACAGG +
Preference number: 5 (lower is better)
Translates to: CTLAVLDSVGTSGWLSAGFEAAF*ASDFDR
Trigger: CCTGTCAAAGTCAGATGCCAAAAAAGCCGCCTCAAA...ACCTGCAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp TCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACCCACATCCAGCACTATGTGCAGGCCCTaGGCATGCTTCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: SRSGRVRDGSRASKPTSSTMCRP*ACFLTA
Trigger: AGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGT...GCTGGATGTGGGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp CACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGAGCCCCAGGAGGATTTaGCTTCGCCACTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: HHLYLLCPCQAAAGRWERSPRRI*LRHLDF
Trigger: GAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGCT...CCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
CDS-3UTR CAA 90 bp CAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGACCACGGGTCCTGCCGTaGCCCCTCACCATGCTCCCT +
Preference number: 5 (lower is better)
Translates to: QTEWRPVFHTCSLTPWLRPRVLP*PLTMLP
Trigger: AGGGAGCATGGTGAGGGGCAACGGCAGGACCCGTGG...TCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCCGCCGCACACACCACTaGTATCTCCTATGCCCGTGT +
Preference number: 5 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPRRTHH*YLLCPC
Trigger: ACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCG...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CAA 90 bp GACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACGCCGCACACACCACTaGTATCTCCTATGCCCGTGT +
Preference number: 5 (lower is better)
Translates to: DGVSPCCPAFLPPRLSKVRRTHH*YLLCPC
Trigger: ACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCG...TACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CAA 90 bp GCCCTCGAATCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACCCACCCCCGAGAACAACTaGAATGTTAGCGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: ALESRSGRVRDGSRASKPTPENN*NVSVST
Trigger: GGTGCTGACGCTAACATTCAAGTTGTTCTCGGGGGT...GGGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGATTCGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCAGGCACCCAGTCTTaGACCCCAGCCCATTCCATG +
Preference number: 5 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMPGTQS*TPAHSM
Trigger: CATGGAATGGGCTGGGGTCAAAGACTGGGTGCCTGG...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436108.6
CDS-3UTR CAA 90 bp ATCGTAAGTCCAGTCCTCAAACAGGAGCCGAGGCACTATGTGCAGGCCCTTGGCCCAGGCACCCAGTCTTaGACCCCAGCCCATTCCATG +
Preference number: 5 (lower is better)
Translates to: IVSPVLKQEPRHYVQALGPGTQS*TPAHSM
Trigger: CATGGAATGGGCTGGGGTCAAAGACTGGGTGCCTGG...GCCAAGGGCCTGCACATAGTGCCTCGGCTCCTGTTTGAGGACTGGACTTACGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS TCA 90 bp TCAAGCAGGAAGGATGAGAACCTTGGTCCACGTCGTGGAGGCCCGTaGCCTCAAACATCTCACGGCCACGTCTCTTCAGCTGCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: SSRKDENLGPRRGGP*PQTSHGHVSSAAAR
Trigger: TCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGTTCTCATCCTTCCTGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS CCA 90 bp GTTCTAACTAGGAGACCTTGGCCTGGGTCACCCAAGGGCAGGACCTaGGCCACTATTGCTGACCACGTCCTGTCACTCCTAGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: VLTRRPWPGSPKGRT*ATIADHVLSLLGLE
Trigger: TTCAAGGCCTAGGAGTGACAGGACGTGGTCAGCAATAGTGGCCCAGGTCCTGCCCTTGGGTGACCCAGGCCAAGGTCTCCTAGTTAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449825.5
ENST00000533056.5
CDS CCA 90 bp CCACCGGCTGCTAGGGCTGTCCTGGCTCCAAAGGTAGAGCAGTCATaGTATGCTGTGAGCCGCCCTGAGCCACCATTAGAAAACGATTCC +
Preference number: 5 (lower is better)
Translates to: PPAARAVLAPKVEQS*YAVSRPEPPLENDS
Trigger: GGAATCGTTTTCTAATGGTGGCTCAGGGCGGCTCACAGCATACCATGACTGCTCTACCTTTGGAGCCAGGACAGCCCTAGCAGCCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528534.1
CDS-3UTR CAA 90 bp CGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAGCTCGCATCCACCCTaGGTCCACGTCGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RSGGLYFTPAHSLHGLEKSSHPP*VHVVEA
Trigger: GGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCT...CTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACACTATGTGCAGGCCCTaGGCATGCTTCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHTMCRP*ACFLTA
Trigger: AGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGT...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp GTCGTGCTACCTGAGGCGGCAGAGCTGAGCCAAGGTCCAGGACCAGTTTCAAGAACCTGGACCACGGTCTaGCTCAGCTCCTCTATCTCA +
Preference number: 5 (lower is better)
Translates to: VVLPEAAELSQGPGPVSRTWTTV*LSSSIS
Trigger: TGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGT...TCTTGAAACTGGTCCTGGACCTTGGCTCAGCTCTGCCGCCTCAGGTAGCACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp ACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCACCTGGACCACGGTCTaGCTCAGCTCCTCTATCTCA +
Preference number: 5 (lower is better)
Translates to: TCSLTPWLRKEHVHRGGRTWTTV*LSSSIS
Trigger: TGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGT...GCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp ACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGCGAAATGCTGGTTCTTaGCCACCTGGACCACGGTCT +
Preference number: 5 (lower is better)
Translates to: TPLVSPMPVSSSSRAVGTRNAGS*PPGPRS
Trigger: AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG...CGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp CTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCACCGAAATGCTGGTTCTTaGCCACCTGGACCACGGTCT +
Preference number: 5 (lower is better)
Translates to: LTPWLRKEHVHRGGRNAHRNAGS*PPGPRS
Trigger: AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG...GTGGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCATTTTGCTTCGCCACTaGGACTTCGGGTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPILLRH*DFGSRT
Trigger: GGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAAT...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CGGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCATTTTGCTTCGCCACTaGGACTTCGGGTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: RSQLTAASTSSSDPPISAILLRH*DFGSRT
Trigger: GGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAAT...GGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp CACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCCAGCCCCAGGAGGATTTaGCTTCGCCACTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: HSLHGLEKNTSTAEAAMPSPRRI*LRHLDF
Trigger: GAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGCT...GGGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp ACGGGGTTTCACCATGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACAGCCCCAGGAGGATTTaGCTTCGCCACTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: TGFHHVAQRSSRHGFPKYSPRRI*LRHLDF
Trigger: GAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGCT...GTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACATGGTGAAACCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
CDS-3UTR CAA 90 bp TCCAGGAGTGGGCGAGTCCGGGATGGTTCCAGAGCTTCCAAACCCACATCCAGCCCACTGCGGCTCTTCTaGTACTCGAAGAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: SRSGRVRDGSRASKPTSSPLRLF*YSKKCS
Trigger: AGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGG...GCTGGATGTGGGTTTGGAAGCTCTGGAACCATCCCGGACTCGCCCACTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CAA 90 bp CACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCGGTGGGAACGGCCACTGCGGCTCTTCTaGTACTCGAAGAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: HHLYLLCPCQAAAGRWERPLRLF*YSKKCS
Trigger: AGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGG...CCGTTCCCACCGCCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CAA 90 bp AGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTATCAAGTGTGGGTGCCTaGGGTCCGACCCAGGACCCC +
Preference number: 5 (lower is better)
Translates to: SKRSGGLYFTPAHSLHGLSSVGA*GPTQDP
Trigger: GGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGA...TAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CAA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGCCAAGATCGCGCCATaGCGCTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGAKIAP*RSSLGN
Trigger: GTTGCCCAGGCTGGAGCGCAATGGCGCGATCTTGGC...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454838.6
ENST00000528581.5
CDS TCA 90 bp TTGCCGAGCAGTAGCTGCGATGCTCAAGAACCACACTCTCAGCTTTaGGGTCCGTCACCACCAAACCCCGGTCTTGCACCGGCTTATCTG +
Preference number: 5 (lower is better)
Translates to: LPSSSCDAQEPHSQL*GPSPPNPGLAPAYL
Trigger: CAGATAAGCCGGTGCAAGACCGGGGTTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGGTTCTTGAGCATCGCAGCTACTGCTCGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000525225.1
ENST00000526714.5
ENST00000528426.5
ENST00000528581.5
ENST00000530939.5
ENST00000531859.5
ENST00000533056.5
ENST00000533059.5
ENST00000534254.5
CDS TCA 90 bp GCTCACGGGCATCCTTGGAGGTCGCGTAGTCCATACCATAGAAGTTaGGCCCCAGGAGGATTTTGCTTCGCCACTTGGACTTCGGGTCCA +
Preference number: 5 (lower is better)
Translates to: AHGHPWRSRSPYHRS*APGGFCFATWTSGP
Trigger: TGGACCCGAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGCTCAACTTCTATGGTATGGACTACGCGACCTCCAAGGATGCCCGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000524832.5
ENST00000526714.5
ENST00000528534.1
ENST00000528581.5
ENST00000531010.1
ENST00000531859.5
CDS TCA 90 bp CCTGGCTCCAAAGGTAGAGCAGTCATGGTATGCTGTGAGCCGCCCTaGGCCACCATTAGAAAACGATTCCGTGTCCTGGAGGCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: PGSKGRAVMVCCEPP*ATIRKRFRVLEAAD
Trigger: GTCTGCTGCCTCCAGGACACGGAATCGTTTTCTAATGGTGGCTCAGGGCGGCTCACAGCATACCATGACTGCTCTACCTTTGGAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528534.1
CDS CCA 90 bp GTGAACATGCCCAGCTGGTCGGTCACGCGCTTCTGGCTTAGCAGCTaGTTCCAGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: VNMPSWSVTRFWLSS*FQTSTTKPSKCWFF
Trigger: AAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGCGTGACCGACCAGCTGGGCATGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429789.6
CDS CCA 90 bp GGTGGGGTGAGGAGGCCTGCAGAGATGAGTGTTTCTGCTGCTGACTaGATCCCTGCTTTAGGAGACCCCATGCCTTACCTGGGATATTCC +
Preference number: 5 (lower is better)
Translates to: GGVRRPAEMSVSAAD*IPALGDPMPYLGYS
Trigger: GGAATATCCCAGGTAAGGCATGGGGTCTCCTAAAGCAGGGATCCAGTCAGCAGCAGAAACACTCATCTCTGCAGGCCTCCTCACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528154.1
CDS-3UTR CAA 90 bp AGACCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGACTATGTGCAGGCCCTaGGCATGCTTCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: RPPPRSHRNAGSLPPGPRTMCRP*ACFLTA
Trigger: AGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGT...CCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CAA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCGAAATGCTGGTTCTTaGCCACCTGGACCACGGTCT +
Preference number: 5 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMRNAGS*PPGPRS
Trigger: AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp GCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCCGAAATGCTGGTTCTTaGCCACCTGGACCACGGTCT +
Preference number: 5 (lower is better)
Translates to: AIEMLVLCHLDHGLAQLLRNAGS*PPGPRS
Trigger: AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG...GAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CAA 90 bp TCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGCCAGCTGCTCAAACTCCTaGTGCGTGAACATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SLTPWLRKEHVHRGGRNASCSNS*CVNMPS
Trigger: GCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCT...GGCATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CACTGCGGCTCTTCTTGTACTCGAAGAAGTGCTCTGAGGCCTGGCTGTCCCACAAGCTGCTCAAACTCCTaGTGCGTGAACATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: HCGSSCTRRSALRPGCPTSCSNS*CVNMPS
Trigger: GCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCT...TGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR CAA 90 bp GACTGCAGCAGACCCGTCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGATTTTGCTTCGCCACTaGGACTTCGGGTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: DCSRPVTANGVEACISHLILLRH*DFGSRT
Trigger: GGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAAT...CAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGACGGGTCTGCTGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp ACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCAGCCCCAGGAGGATTTaGCTTCGCCACTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: TPAHSLHGLEKNTSTAEASPRRI*LRHLDF
Trigger: GAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGCT...GGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp AACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGGCCACTGCGGCTCTTCTaGTACTCGAAGAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: NRRTHHLYLLCPCQAAAGPLRLF*YSKKCS
Trigger: AGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGG...CCCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CAA 90 bp CAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTGCAGGGACTTCAGGGTaGGGTAGAAGACGACGTGCC +
Preference number: 5 (lower is better)
Translates to: QQTEWRPVFHTCSLTPWLAGTSG*GRRRRA
Trigger: GGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTGC...AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CAA 90 bp TACAGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCCGCCGCACACACCACTaGTATCTCCTATGCCCGTGT +
Preference number: 5 (lower is better)
Translates to: YRHEPPHTPLVSPMPVSSRRTHH*YLLCPC
Trigger: ACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCG...GCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS-3UTR CAA 90 bp GAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCAGCAGCAGGACCCCCGAGAACAACTaGAATGTTAGCGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: EPPHTPLVSPMPVSSSSRTPENN*NVSVST
Trigger: GGTGCTGACGCTAACATTCAAGTTGTTCTCGGGGGT...CCTGCTGCTGCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp CGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATCTCCAGGCACCCAGTCTTaGACCCCAGCCCATTCCATG +
Preference number: 5 (lower is better)
Translates to: RNAGSLPPGPRSCSAPLSPGTQS*TPAHSM
Trigger: CATGGAATGGGCTGGGGTCAAAGACTGGGTGCCTGG...AGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CAA 90 bp CCTCCACCACGAAGCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTACCACACTCTCAGCTTaGAGGTCCGTCACCACCAAA +
Preference number: 5 (lower is better)
Translates to: PPPRSHRNAGSLPPGPRSTTLSA*RSVTTK
Trigger: TTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGGT...AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGCTTCGTGGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CAA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGGTCTGTCCCGGGCCTTaGCCGAGCAGTAGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTVCPGP*PSSSCD
Trigger: ATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGAC...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp TATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGTCTGTCCCGGGCCTTaGCCGAGCAGTAGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: YFTPAHSLHGLEKNTSTAVCPGP*PSSSCD
Trigger: ATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGAC...CGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACAGCTCGCATCCACCCTaGGTCCACGTCGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNSSHPP*VHVVEA
Trigger: GGCCTCCACGACGTGGACCAAGGGTGGATGCGAGCT...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATACTATGTGCAGGCCCTaGGCATGCTTCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNTMCRP*ACFLTA
Trigger: AGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGT...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp GGTCACAGCTCACTGCAGCCTCAACCTCATCAAGCGATCCTCCCATCTCAGCCTCCACTGCGGCTCTTCTaGTACTCGAAGAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: GHSSLQPQPHQAILPSQPPLRLF*YSKKCS
Trigger: AGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGG...AGGCTGAGATGGGAGGATCGCTTGATGAGGTTGAGGCTGCAGTGAGCTGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp CTCTTCTTGTACTCGAAGAAGTGCTCTGAGGCCTGGCTGTCCCACACCATCCGGCCACTGCGGCTCTTCTaGTACTCGAAGAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: LFLYSKKCSEAWLSHTIRPLRLF*YSKKCS
Trigger: AGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGG...CCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528521.1
CDS-3UTR CAA 90 bp ATTACAGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGAGGGCCACCAGGCCTaGGCTCATGATGCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: ITGMNRRTHHLYLLCPCQEGHQA*AHDASK
Trigger: TTTGGAGGCATCATGAGCCAAGGCCTGGTGGCCCTC...TTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCGCCGCACACACCACTaGTATCTCCTATGCCCGTGT +
Preference number: 5 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWRRTHH*YLLCPC
Trigger: ACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCG...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CAA 90 bp TGTTGCCCAGCGTTCCTCCCGCCACGGCTTTCCAAAGTACTGGGATTACAGGCAACCCCCGAGAACAACTaGAATGTTAGCGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: CCPAFLPPRLSKVLGLQATPENN*NVSVST
Trigger: GGTGCTGACGCTAACATTCAAGTTGTTCTCGGGGGT...TGCCTGTAATCCCAGTACTTTGGAAAGCCGTGGCGGGAGGAACGCTGGGCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGGCAAGCCAGAGGAGGTaGAAGAGTGTCCGCATGGTA +
Preference number: 5 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWASQRR*KSVRMV
Trigger: TACCATGCGGACACTCTTCAACCTCCTCTGGCTTGC...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
CDS-3UTR CAA 90 bp TGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATACCACACTCTCAGCTTaGAGGTCCGTCACCACCAAA +
Preference number: 5 (lower is better)
Translates to: CSLTPWLRKEHVHRGGRNTTLSA*RSVTTK
Trigger: TTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGGT...ATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACGTCTGTCCCGGGCCTTaGCCGAGCAGTAGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHVCPGP*PSSSCD
Trigger: ATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGAC...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTCGAAATGCTGGTTCTTaGCCACCTGGACCACGGTCT +
Preference number: 5 (lower is better)
Translates to: QQTEWRPVFHTCSLTPWLRNAGS*PPGPRS
Trigger: AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG...AAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp GAAATCATCGTAAGTCCAGTCCTCAAACAGGAGCCGAGGCACTATGTGCAGGCCCGAAATGCTGGTTCTTaGCCACCTGGACCACGGTCT +
Preference number: 5 (lower is better)
Translates to: EIIVSPVLKQEPRHYVQARNAGS*PPGPRS
Trigger: AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG...GGCCTGCACATAGTGCCTCGGCTCCTGTTTGAGGACTGGACTTACGATGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR CAA 90 bp ACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTAGCTGCTCAAACTCCTaGTGCGTGAACATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: TANGVEACISHLLTHSMASCSNS*CVNMPS
Trigger: GCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCT...AGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATCTAGCTGCTCAAACTCCTaGTGCGTGAACATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RNAGSLPPGPRSCSAPLSSCSNS*CVNMPS
Trigger: GCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCT...AGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR CAA 90 bp TTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGATTTTGCTTCGCCACTaGGACTTCGGGTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: FTPAHSLHGLEKNTSTAEILLRH*DFGSRT
Trigger: GGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAAT...CTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CACCCTCACTCCAACAGAAGCCACAGGACCCCCGAGAACAACTTGAATGTTAGCAGCCCCAGGAGGATTTaGCTTCGCCACTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: HPHSNRSHRTPENNLNVSSPRRI*LRHLDF
Trigger: GAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGCT...GCTAACATTCAAGTTGTTCTCGGGGGTCCTGTGGCTTCTGTTGGAGTGAGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGACCTGGGCCACTATaGCTGACCACGTCCTGTCAC +
Preference number: 5 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRGPGPL*LTTSCH
Trigger: GTGACAGGACGTGGTCAGCAATAGTGGCCCAGGTCC...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR CAA 90 bp GGAAATCATCGTAAGTCCAGTCCTCAAACAGGAGCCGAGGCACTATGTGCAGGCAAGCAGGAGAATCGCTaGAACCTGGGTGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: GNHRKSSPQTGAEALCAGKQENR*NLGGRG
Trigger: ACCTCTGCCACCCAGGTTCAAGCGATTCTCCTGCTT...GCCTGCACATAGTGCCTCGGCTCCTGTTTGAGGACTGGACTTACGATGATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS TCA 90 bp TTTCCAAGTTTGCTAAGAGTACGAATGCAGACTCAAGAGGCTCCATaGACACTGGCCCCGACAACAGGCTCACGGGCATCCTTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: FPSLLRVRMQTQEAP*TLAPTTGSRASLEV
Trigger: GACCTCCAAGGATGCCCGTGAGCCTGTTGTCGGGGCCAGTGTTCATGGAGCCTCTTGAGTCTGCATTCGTACTCTTAGCAAACTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524832.5
CDS-3UTR CAA 90 bp GCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGGCCGCAATGTTTGAGGCGGCTTTTTaGGCATCTGACTTTGACAGG +
Preference number: 5 (lower is better)
Translates to: AHSLHGLEKNTSTAEAAMFEAAF*ASDFDR
Trigger: CCTGTCAAAGTCAGATGCCAAAAAAGCCGCCTCAAA...CATTGCGGCCTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CAAAGTGTCTGTCCCGGGCCTTTGCCGAGCAGTAGCTGCGATGCTCAAGAACCATTTGAGGCGGCTTTTTaGGCATCTGACTTTGACAGG +
Preference number: 5 (lower is better)
Translates to: QSVCPGPLPSSSCDAQEPFEAAF*ASDFDR
Trigger: CCTGTCAAAGTCAGATGCCAAAAAAGCCGCCTCAAA...TGGTTCTTGAGCATCGCAGCTACTGCTCGGCAAAGGCCCGGGACAGACACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528426.5
CDS-3UTR CAA 90 bp GCCATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTTTGAGGCGGCTTTTTaGGCATCTGACTTTGACAGG +
Preference number: 5 (lower is better)
Translates to: AIEMLVLCHLDHGLAQLLFEAAF*ASDFDR
Trigger: CCTGTCAAAGTCAGATGCCAAAAAAGCCGCCTCAAA...GAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CAA 90 bp TCACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGACCACACTCTCAGCTTaGAGGTCCGTCACCACCAAA +
Preference number: 5 (lower is better)
Translates to: SQQTEWRPVFHTCSLTPWTTLSA*RSVTTK
Trigger: TTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGGT...CCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp TTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGACCACACTCTCAGCTTaGAGGTCCGTCACCACCAAA +
Preference number: 5 (lower is better)
Translates to: FTPAHSLHGLEKNTSTAETTLSA*RSVTTK
Trigger: TTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGGT...CTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGACTATGTGCAGGCCCTaGGCATGCTTCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: RSGGLYFTPAHSLHGLEKTMCRP*ACFLTA
Trigger: AGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGT...CTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp ATCGAAATGCTGGTTCTTTGCCACCTGGACCACGGTCTTGCTCAGCTCCTCTATACCTGGACCACGGTCTaGCTCAGCTCCTCTATCTCA +
Preference number: 5 (lower is better)
Translates to: IEMLVLCHLDHGLAQLLYTWTTV*LSSSIS
Trigger: TGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGT...ATAGAGGAGCTGAGCAAGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CAA 90 bp CGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAGCTGCTCAAACTCCTaGTGCGTGAACATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RSGGLYFTPAHSLHGLEKSCSNS*CVNMPS
Trigger: GCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCT...CTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAATTTTGCTTCGCCACTaGGACTTCGGGTCCAGGACC +
Preference number: 5 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGILLRH*DFGSRT
Trigger: GGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAAT...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp AGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAAGCCCCAGGAGGATTTaGCTTCGCCACTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: SKRSGGLYFTPAHSLHGLSPRRI*LRHLDF
Trigger: GAAGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGCT...TAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp ACAGCAAACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTCCACTGCGGCTCTTCTaGTACTCGAAGAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: TANGVEACISHLLTHSMAPLRLF*YSKKCS
Trigger: AGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGG...AGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGTTTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CAA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACGCAGGGACTTCAGGGTaGGGTAGAAGACGACGTGCC +
Preference number: 5 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHAGTSG*GRRRRA
Trigger: GGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTGC...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CAA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACGCAGGGACTTCAGGGTaGGGTAGAAGACGACGTGCC +
Preference number: 5 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNAGTSG*GRRRRA
Trigger: GGCACGTCGTCTTCTACCCAACCCTGAAGTCCCTGC...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CAA 90 bp TGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGAGGGCCACCAGGCCTaGGCTCATGATGCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: WRPVFHTCSLTPWLRKEHEGHQA*AHDASK
Trigger: TTTGGAGGCATCATGAGCCAAGGCCTGGTGGCCCTC...GTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp TTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGACGGTCAGTTCAGGTaGGGGCATCTGATCCCCAAA +
Preference number: 5 (lower is better)
Translates to: FHTCSLTPWLRKEHVHRGDGQFR*GHLIPK
Trigger: TTTGGGGATCAGATGCCCCAACCTGAACTGACCGTC...TCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp ACGGTCTTGCTCAGCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAAGCAAGCCAGAGGAGGTaGAAGAGTGTCCGCATGGTA +
Preference number: 5 (lower is better)
Translates to: TVLLSSSISSSLSKTFRKASQRR*KSVRMV
Trigger: TACCATGCGGACACTCTTCAACCTCCTCTGGCTTGC...TTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CAA 90 bp TACAGGCATGAACCGCCGCACACACCACTTGTATCTCCTATGCCCGTGTCAAGCTTTGAGGCGGCTTTTTaGGCATCTGACTTTGACAGG +
Preference number: 5 (lower is better)
Translates to: YRHEPPHTPLVSPMPVSSFEAAF*ASDFDR
Trigger: CCTGTCAAAGTCAGATGCCAAAAAAGCCGCCTCAAA...GCTTGACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCGGTTCATGCCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
CDS-3UTR CAA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGACTATGTGCAGGCCCTaGGCATGCTTCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTTMCRP*ACFLTA
Trigger: AGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGT...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp ACGGTCTTGCTCAGCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAAACTATGTGCAGGCCCTaGGCATGCTTCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: TVLLSSSISSSLSKTFRKTMCRP*ACFLTA
Trigger: AGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGT...TTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS-3UTR CAA 90 bp GTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCCGAAATGCTGGTTCTTaGCCACCTGGACCACGGTCT +
Preference number: 5 (lower is better)
Translates to: VFHTCSLTPWLRKEHVHRRNAGS*PPGPRS
Trigger: AGACCGTGGTCCAGGTGGCAAAGAACCAGCATTTCG...GCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGCCACTGCGGCTCTTCTaGTACTCGAAGAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: RSGGLYFTPAHSLHGLEKPLRLF*YSKKCS
Trigger: AGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGG...CTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CAA 90 bp CTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCCGCCGCACACACCACTaGTATCTCCTATGCCCGTGT +
Preference number: 5 (lower is better)
Translates to: LYFTPAHSLHGLEKNTSTRRTHH*YLLCPC
Trigger: ACACGGGCATAGGAGATACAAGTGGTGTGTGCGGCG...GGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323578.13
ENST00000449825.5
ENST00000454838.6
ENST00000534207.5
CDS-3UTR CAA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAATGGGCGACTCCTCATTaGCAGAGTCAGCACAGGCAG +
Preference number: 5 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKEWATPH*QSQHRQ
Trigger: CTGCCTGTGCTGACTCTGCAAATGAGGAGTCGCCCA...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449825.5
CDS-3UTR CAA 90 bp CCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATCGTAAGTCCAGTGGAAGGATGAGAACCTaGGTCCACGTCGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PLSHPHCLRRSGNHRKSSGRMRT*VHVVEA
Trigger: GGCCTCCACGACGTGGACCAAGGTTCTCATCCTTCC...ACTGGACTTACGATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS-3UTR CAA 90 bp AGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCGCAAGCCAGAGGAGGTaGAAGAGTGTCCGCATGGTA +
Preference number: 5 (lower is better)
Translates to: RPVFHTCSLTPWLRKEHVASQRR*KSVRMV
Trigger: TACCATGCGGACACTCTTCAACCTCCTCTGGCTTGC...GACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000528581.5
CDS-3UTR CAA 90 bp TTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCGCGGAGTTTGAGGCGGCTTTTTaGGCATCTGACTTTGACAGG +
Preference number: 5 (lower is better)
Translates to: FTPAHSLHGLEKNTSTAEFEAAF*ASDFDR
Trigger: CCTGTCAAAGTCAGATGCCAAAAAAGCCGCCTCAAA...CTCCGCGGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp GGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGACCACACTCTCAGCTTaGAGGTCCGTCACCACCAAA +
Preference number: 5 (lower is better)
Translates to: GGLYFTPAHSLHGLEKNTTTLSA*RSVTTK
Trigger: TTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGGT...CGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACCACCTGGACCACGGTCTaGCTCAGCTCCTCTATCTCA +
Preference number: 5 (lower is better)
Translates to: LYFTPAHSLHGLEKNTSTTWTTV*LSSSIS
Trigger: TGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGT...GGTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp CCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCACACCTGGACCACGGTCTaGCTCAGCTCCTCTATCTCA +
Preference number: 5 (lower is better)
Translates to: PVFHTCSLTPWLRKEHVHTWTTV*LSSSIS
Trigger: TGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGT...GTGGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp AGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACCTGGACCACGGTCTaGCTCAGCTCCTCTATCTCA +
Preference number: 5 (lower is better)
Translates to: SGGLYFTPAHSLHGLEKNTWTTV*LSSSIS
Trigger: TGAGATAGAGGAGCTGAGCAAGACCGTGGTCCAGGT...GTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp TGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACAGCTGCTCAAACTCCTaGTGCGTGAACATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: WRPVFHTCSLTPWLRKEHSCSNS*CVNMPS
Trigger: GCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCT...GTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp GGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAACACGTCCCCACTGCGGCTCTTCTaGTACTCGAAGAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: GLYFTPAHSLHGLEKNTSPLRLF*YSKKCS
Trigger: AGAGCACTTCTTCGAGTACAAGAAGAGCCGCAGTGG...GGACGTGTTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
ENST00000534207.5
CDS-3UTR CAA 90 bp GAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAAGAAACCACACTCTCAGCTTaGAGGTCCGTCACCACCAAA +
Preference number: 5 (lower is better)
Translates to: EWRPVFHTCSLTPWLRKETTLSA*RSVTTK
Trigger: TTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGGT...TTCTTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp ACGGAGTGGAGGCCTGTATTTCACACCTGCTCACTCACTCCATGGCTTAGAAAATTTGAGGCGGCTTTTTaGGCATCTGACTTTGACAGG +
Preference number: 5 (lower is better)
Translates to: TEWRPVFHTCSLTPWLRKFEAAF*ASDFDR
Trigger: CCTGTCAAAGTCAGATGCCAAAAAAGCCGCCTCAAA...TTTTCTAAGCCATGGAGTGAGTGAGCAGGTGTGAAATACAGGCCTCCACTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000528581.5
CDS-3UTR CAA 90 bp TCTTGCTCAGCTCCTCTATCTCATCCTCACTGTCTAAGACGTTCCGGAAATCATACCACACTCTCAGCTTaGAGGTCCGTCACCACCAAA +
Preference number: 5 (lower is better)
Translates to: SCSAPLSHPHCLRRSGNHTTLSA*RSVTTK
Trigger: TTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGGT...ATGATTTCCGGAACGTCTTAGACAGTGAGGATGAGATAGAGGAGCTGAGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000534254.5
CDS TCA 72 bp TCGCTGCCCGGCGCGCCCACTTTGCGGGAGGGAAACTaGGGCCGTGCAAGGAGGAGGAGCAGGGGCCGGCCG +
Preference number: 6 (lower is better)
Translates to: SLPGAPTLREGN*GRARRRSRGRP
Trigger: CGGCCGGCCCCTGCTCCTCCTCCTTGCACGGCCTCAGTTTCCCTCCCGCAAAGTGGGCGCGCCGGGCAGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000530939.5
CDS GCA 72 bp CCCGGGGCCGAGCCTCGCTGCCCGGCGCGCCCACTTTaGGGGAGGGAAACTGAGGCCGTGCAAGGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: PGAEPRCPARPL*GRETEAVQGGG
Trigger: TCCTCCTCCTTGCACGGCCTCAGTTTCCCTCCCGCAAAGTGGGCGCGCCGGGCAGCGAGGCTCGGCCCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528426.5
ENST00000530939.5
CDS CAA 90 bp GGCCTCCCTGACGTCCAGGCGGAGGCTTTCTCAAGTGTGGGTGCCTaGGGTCCGACCCAGGACCCCCTCCCCAGCTCCCGTCCTAGAGCA +
Preference number: 6 (lower is better)
Translates to: GLPDVQAEAFSSVGA*GPTQDPLPSSRPRA
Trigger: TGCTCTAGGACGGGAGCTGGGGAGGGGGTCCTGGGTCGGACCCAAGGCACCCACACTTGAGAAAGCCTCCGCCTGGACGTCAGGGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529539.5
CDS CAA 90 bp ACCCACCCGCGCCCAGTGACACCTTCAGCACGGCAGGGAGAGCCCTaGGCTCACCTGGCCCCGACAACAGGCTCACGGGCATCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: THPRPVTPSARQGEP*AHLAPTTGSRASLE
Trigger: CTCCAAGGATGCCCGTGAGCCTGTTGTCGGGGCCAGGTGAGCCAAGGGCTCTCCCTGCCGTGCTGAAGGTGTCACTGGGCGCGGGTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531010.1
CDS CAA 72 bp CGCCCAGTGACACCTTCAGCACGGCAGGGAGAGCCCTaGGCTCACCTGGCCCCGACAACAGGCTCACGGGCA +
Preference number: 6 (lower is better)
Translates to: RPVTPSARQGEP*AHLAPTTGSRA
Trigger: TGCCCGTGAGCCTGTTGTCGGGGCCAGGTGAGCCAAGGGCTCTCCCTGCCGTGCTGAAGGTGTCACTGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531010.1
CDS CAA 90 bp GGGCCAGGCTCCTCTGAGCCCATTTCTAGGGCAGCCCCTGCACCCTaGCCGTGCTGGACTCGGTGGGGACGTCTGGGTGGCTCTCTAGAG +
Preference number: 6 (lower is better)
Translates to: GPGSSEPISRAAPAP*PCWTRWGRLGGSLE
Trigger: CTCTAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGGCTCAGAGGAGCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532909.5
CDS CCA 72 bp AGGGCAGCCCCTGCACCCTTGCCGTGCTGGACTCGGTaGGGACGTCTGGGTGGCTCTCTAGAGCAGGTCGTA +
Preference number: 6 (lower is better)
Translates to: RAAPAPLPCWTR*GRLGGSLEQVV
Trigger: TACGACCTGCTCTAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532909.5
CDS CCA 72 bp CACCTTCAGCACGGCAGGGAGAGCCCTTGGCTCACCTaGCCCCGACAACAGGCTCACGGGCATCCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: HLQHGRESPWLT*PRQQAHGHPWR
Trigger: CCTCCAAGGATGCCCGTGAGCCTGTTGTCGGGGCCAGGTGAGCCAAGGGCTCTCCCTGCCGTGCTGAAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531010.1
CDS TCA 72 bp CCAGCACGGGGGCCAGCTGCTCAAACTCCTTGTGCGTaGACATGCCCAGCTGGTCGGTCACGCGCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: PARGPAAQTPCA*TCPAGRSRASG
Trigger: GCCAGAAGCGCGTGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429789.6
CDS CCA 72 bp CCCATTTCTAGGGCAGCCCCTGCACCCTTGCCGTGCTaGACTCGGTGGGGACGTCTGGGTGGCTCTCTAGAG +
Preference number: 6 (lower is better)
Translates to: PISRAAPAPLPC*TRWGRLGGSLE
Trigger: CTCTAGAGAGCCACCCAGACGTCCCCACCGAGTCCAGCACGGCAAGGGTGCAGGGGCTGCCCTAGAAATGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532909.5
CDS GCA 72 bp CCATCCAGCACGGGGGCCAGCTGCTCAAACTCCTTGTaGGTGAACATGCCCAGCTGGTCGGTCACGCGCTTC +
Preference number: 6 (lower is better)
Translates to: PSSTGASCSNSL*VNMPSWSVTRF
Trigger: GAAGCGCGTGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429789.6
CDS GCA 72 bp CAGGACCTGGACGCAGGCTCGAACCCAGGACAGGGGTaGATTAGGGCCAGGCTGATGCGCTGTAGAGTAGTC +
Preference number: 6 (lower is better)
Translates to: QDLDAGSNPGQG*IRARLMRCRVV
Trigger: GACTACTCTACAGCGCATCAGCCTGGCCCTAATGCACCCCTGTCCTGGGTTCGAGCCTGCGTCCAGGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000524832.5
ENST00000528521.1
ENST00000528581.5
ENST00000531010.1
ENST00000531859.5
CDS CAA 72 bp AAACCATCCAGCACGGGGGCCAGCTGCTCAAACTCCTaGTGCGTGAACATGCCCAGCTGGTCGGTCACGCGC +
Preference number: 6 (lower is better)
Translates to: KPSSTGASCSNS*CVNMPSWSVTR
Trigger: GCGCGTGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGATGGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429789.6
CDS TCA 72 bp CAGTACATGGAGCCACAGGCAAAGGCAGTGAGTGCTTaGACAGCCACGGCAGTTCCGAGAGGCTGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: QYMEPQAKAVSA*TATAVPRGWPG
Trigger: GCCTGGCCAGCCTCTCGGAACTGCCGTGGCTGTTCAAGCACTCACTGCCTTTGCCTGTGGCTCCATGTACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525225.1
CDS CCA 72 bp CGGCTCTTCTTGTACTCGAAGAAGTGCTCTGAGGCCTaGCTGTCCCACACCATCCGGGGCCTGTGGTCCTTC +
Preference number: 6 (lower is better)
Translates to: RLFLYSKKCSEA*LSHTIRGLWSF
Trigger: GAAGGACCACAGGCCCCGGATGGTGTGGGACAGCCAGGCCTCAGAGCACTTCTTCGAGTACAAGAAGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000524538.1
ENST00000528521.1
ENST00000528581.5
ENST00000529539.5
ENST00000532909.5
ENST00000534207.5
CDS CCA 72 bp CCCAGCTGGTCGGTCACGCGCTTCTGGCTTAGCAGCTaGTTCCAGACCTCCACCACGAAGCCATCGAAATGC +
Preference number: 6 (lower is better)
Translates to: PSWSVTRFWLSS*FQTSTTKPSKC
Trigger: GCATTTCGATGGCTTCGTGGTGGAGGTCTGGAACCAGCTGCTAAGCCAGAAGCGCGTGACCGACCAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429789.6
CDS CAA 90 bp ATGAGGCTGAAACCATCCAGCACGGGGGCCAGCTGCTCAAACTCCTaGTGCGTGAACATGCCCAGCTGGTCGGTCACGCGCTTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: MRLKPSSTGASCSNS*CVNMPSWSVTRFWL
Trigger: AAGCCAGAAGCGCGTGACCGACCAGCTGGGCATGTTCACGCACAAGGAGTTTGAGCAGCTGGCCCCCGTGCTGGATGGTTTCAGCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429789.6
CDS TCA 72 bp GCACAGGCAGGGCCCTTCCCAACAGTGGCAGCCTCGTaGCTCTGTCCTGTTCTAACTAGGAGACCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: AQAGPFPTVAAS*LCPVLTRRPWP
Trigger: AGGCCAAGGTCTCCTAGTTAGAACAGGACAGAGTCACGAGGCTGCCACTGTTGGGAAGGGCCCTGCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449825.5
ENST00000533056.5
CDS CCA 72 bp TCCGGGGCCTGTGGTCCTTCAGTGTCTGGATGTACCTaGGGAGACCAGGATATGGATTTGGGAGCCCACCCA +
Preference number: 6 (lower is better)
Translates to: SGACGPSVSGCT*GDQDMDLGAHP
Trigger: TGGGTGGGCTCCCAAATCCATATCCTGGTCTCCCCAGGTACATCCAGACACTGAAGGACCACAGGCCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524538.1
CDS CAA 90 bp TTCAGCCTGTGGGGCAAGCACAGTCAAGCAGGAAGGATGAGAACCTaGGTCCACGTCGTGGAGGCCCGTGACCTCAAACATCTCACGGCC +
Preference number: 6 (lower is better)
Translates to: FSLWGKHSQAGRMRT*VHVVEARDLKHLTA
Trigger: GGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGTTCTCATCCTTCCTGCTTGACTGTGCTTGCCCCACAGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS TCA 72 bp CGTCACCACCAAACCCCGGTCTTGCACCGGCTTATCTaGAAACTGACTCTGGGTGGCAGAGGTTGCGGTGAG +
Preference number: 6 (lower is better)
Translates to: RHHQTPVLHRLI*KLTLGGRGCGE
Trigger: CTCACCGCAACCTCTGCCACCCAGAGTCAGTTTTCAGATAAGCCGGTGCAAGACCGGGGTTTGGTGGTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454838.6
ENST00000528581.5
CDS GCA 72 bp CGGGCCTCAAACATCTCACGGCCACGTCTCTTCAGCTaGAGCCAGACGGGTGAGATCTGTGTGAACTTGCTC +
Preference number: 6 (lower is better)
Translates to: RASNISRPRLFS*SQTGEICVNLL
Trigger: GAGCAAGTTCACACAGATCTCACCCGTCTGGCTGCAGCTGAAGAGACGTGGCCGTGAGATGTTTGAGGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531859.5
CDS CCA 72 bp ATTTTGCTTCGCCACTTGGACTTCGGGTCCAGGACCTaGACGCAGGCTCGAACCCAGGACAGGGGTGCATTA +
Preference number: 6 (lower is better)
Translates to: ILLRHLDFGSRT*TQARTQDRGAL
Trigger: TAATGCACCCCTGTCCTGGGTTCGAGCCTGCGTCCAGGTCCTGGACCCGAAGTCCAAGTGGCGAAGCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000524832.5
ENST00000526714.5
ENST00000528521.1
ENST00000528581.5
ENST00000531010.1
ENST00000531859.5
CDS CCA 72 bp GAGTACGAATGCAGACTCAAGAGGCTCCATGAACACTaGCCCCGACAACAGGCTCACGGGCATCCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: EYECRLKRLHEH*PRQQAHGHPWR
Trigger: CCTCCAAGGATGCCCGTGAGCCTGTTGTCGGGGCCAGTGTTCATGGAGCCTCTTGAGTCTGCATTCGTACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524832.5
CDS CCA 72 bp CTTCTGGGTGGAAATCTGGTTGTTGGAGGTGCCTGGTaGCTGTGGGGCCTTTGGGGCTGGGTTTGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: LLGGNLVVGGAW*LWGLWGWVCVF
Trigger: GAAGACACAAACCCAGCCCCAAAGGCCCCACAGCCACCAGGCACCTCCAACAACCAGATTTCCACCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533059.5
CDS CAA 72 bp TCCTCAAACAGGAGCCGAGGCACTATGTGCAGGCCCTaGGCATGCTTCCTGACAGCTCGCATCCACCACTCT +
Preference number: 6 (lower is better)
Translates to: SSNRSRGTMCRP*ACFLTARIHHS
Trigger: AGAGTGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCTCCTGTTTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS TCA 72 bp AGTAGCTGCGATGCTCAAGAACCACACTCTCAGCTTTaGGGTCCGTCACCACCAAACCCCGGTCTTGCACCG +
Preference number: 6 (lower is better)
Translates to: SSCDAQEPHSQL*GPSPPNPGLAP
Trigger: CGGTGCAAGACCGGGGTTTGGTGGTGACGGACCTCAAAGCTGAGAGTGTGGTTCTTGAGCATCGCAGCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000525225.1
ENST00000526714.5
ENST00000528426.5
ENST00000528581.5
ENST00000530939.5
ENST00000531859.5
ENST00000533056.5
ENST00000533059.5
ENST00000534254.5
CDS TCA 72 bp AAGGATGAGAACCTTGGTCCACGTCGTGGAGGCCCGTaGCCTCAAACATCTCACGGCCACGTCTCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: KDENLGPRRGGP*PQTSHGHVSSA
Trigger: AGCTGAAGAGACGTGGCCGTGAGATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGTTCTCATCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS GCA 72 bp AACAGGAGCCGAGGCACTATGTGCAGGCCCTTGGCATaGTTCCTGACAGCTCGCATCCACCACTCTTTTCAG +
Preference number: 6 (lower is better)
Translates to: NRSRGTMCRPLA*FLTARIHHSFQ
Trigger: CTGAAAAGAGTGGTGGATGCGAGCTGTCAGGAAGCATGCCAAGGGCCTGCACATAGTGCCTCGGCTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS CAA 72 bp TGGGGCAAGCACAGTCAAGCAGGAAGGATGAGAACCTaGGTCCACGTCGTGGAGGCCCGTGACCTCAAACAT +
Preference number: 6 (lower is better)
Translates to: WGKHSQAGRMRT*VHVVEARDLKH
Trigger: ATGTTTGAGGTCACGGGCCTCCACGACGTGGACCAAGGTTCTCATCCTTCCTGCTTGACTGTGCTTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534254.5
CDS TCA 72 bp CCATGCCTTACCTGGGATATTCCTGGGTCCCCAGCCTaGGGATGCCTCTCACAGACATCCTCAAAAGCACTC +
Preference number: 6 (lower is better)
Translates to: PCLTWDIPGSPA*GCLSQTSSKAL
Trigger: GAGTGCTTTTGAGGATGTCTGTGAGAGGCATCCTCAGGCTGGGGACCCAGGAATATCCCAGGTAAGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528154.1
CDS TCA 72 bp GGTGAGGAGGCCTGCAGAGATGAGTGTTTCTGCTGCTaGCTGGATCCCTGCTTTAGGAGACCCCATGCCTTA +
Preference number: 6 (lower is better)
Translates to: GEEACRDECFCC*LDPCFRRPHAL
Trigger: TAAGGCATGGGGTCTCCTAAAGCAGGGATCCAGTCAGCAGCAGAAACACTCATCTCTGCAGGCCTCCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528154.1
CDS TCA 72 bp TTGCTAAGAGTACGAATGCAGACTCAAGAGGCTCCATaGACACTGGCCCCGACAACAGGCTCACGGGCATCC +
Preference number: 6 (lower is better)
Translates to: LLRVRMQTQEAP*TLAPTTGSRAS
Trigger: GGATGCCCGTGAGCCTGTTGTCGGGGCCAGTGTTCATGGAGCCTCTTGAGTCTGCATTCGTACTCTTAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524832.5
CDS CCA 72 bp AGGAGGCCTGCAGAGATGAGTGTTTCTGCTGCTGACTaGATCCCTGCTTTAGGAGACCCCATGCCTTACCTG +
Preference number: 6 (lower is better)
Translates to: RRPAEMSVSAAD*IPALGDPMPYL
Trigger: CAGGTAAGGCATGGGGTCTCCTAAAGCAGGGATCCAGTCAGCAGCAGAAACACTCATCTCTGCAGGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528154.1
CDS TCA 72 bp CATCCTTGGAGGTCGCGTAGTCCATACCATAGAAGTTaGGCCCCAGGAGGATTTTGCTTCGCCACTTGGACT +
Preference number: 6 (lower is better)
Translates to: HPWRSRSPYHRS*APGGFCFATWT
Trigger: AGTCCAAGTGGCGAAGCAAAATCCTCCTGGGGCTCAACTTCTATGGTATGGACTACGCGACCTCCAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000323578.13
ENST00000429789.6
ENST00000436108.6
ENST00000449825.5
ENST00000454838.6
ENST00000524832.5
ENST00000526714.5
ENST00000528534.1
ENST00000528581.5
ENST00000529539.5
ENST00000531010.1
ENST00000531859.5
CDS TCA 72 bp AAAGGTAGAGCAGTCATGGTATGCTGTGAGCCGCCCTaGGCCACCATTAGAAAACGATTCCGTGTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: KGRAVMVCCEPP*ATIRKRFRVLE
Trigger: CTCCAGGACACGGAATCGTTTTCTAATGGTGGCTCAGGGCGGCTCACAGCATACCATGACTGCTCTACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528534.1
CDS CCA 72 bp AGAATTCCAAAAGGTAAAAGGTGTATTCGTGAGCTGTaGGACAAATTCAATGGATCTAGTGTTTGTGGTCTC +
Preference number: 6 (lower is better)
Translates to: RIPKGKRCIREL*DKFNGSSVCGL
Trigger: GAGACCACAAACACTAGATCCATTGAATTTGTCCCACAGCTCACGAATACACCTTTTACCTTTTGGAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524832.5
CDS CAA 72 bp AAATATTTGAAGAATTTGGCCTCAAATTTTCCAAGTTaGCTAAGAGTACGAATGCAGACTCAAGAGGCTCCA +
Preference number: 6 (lower is better)
Translates to: KYLKNLASNFPS*LRVRMQTQEAP
Trigger: TGGAGCCTCTTGAGTCTGCATTCGTACTCTTAGCAAACTTGGAAAATTTGAGGCCAAATTCTTCAAATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524832.5