Pregenerated sensors for CHIC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000109220Ensembl transcript IDs: ENST00000263921.8, ENST00000510894.1, ENST00000512964.5
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GAACCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGCCTGCCCAAAGGGCCTaGCTCCCGGGGTTGGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: EPMLCHHQESTKQGTIGKPAQRA*LPGLAP Trigger: CGGCGCCAACCCCGGGAGTCAGGCCCTTTGGGCAGG...CTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263921.8 |
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| CDS-3UTR GCA 90 bp | GAACCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGGCCTCCGAGCTCCCCTaGCCAAAGGGCCTGACTCCC | + |
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Preference number: 4 (lower is better) Translates to: EPMLCHHQESTKQGTIGKASELP*PKGLTP Trigger: GGGAGTCAGGCCCTTTGGGCAGGGGAGCTCGGAGGC...CTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263921.8 |
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| CDS-3UTR TCA 90 bp | CCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAGGTCCGGCGAGTACTTaGGCAGCTGCTCCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PMLCHHQESTKQGTIGKTGPAST*AAAPPG Trigger: CCCTGGAGGAGCAGCTGCTCAAGTACTCGCCGGACC...TGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR TCA 90 bp | CGATTCTGTAGAACCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCCAAATACGGTGACGTaGCCGGAGCCGCGGACGACC | + |
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Preference number: 4 (lower is better) Translates to: RFCRTNVMSPPGEHQARHPNTVT*PEPRTT Trigger: GGTCGTCCGCGGCTCCGGTCACGTCACCGTATTTGG...GTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGGTTCTACAGAATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR CCA 90 bp | TTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACATACCGGCTACAGAGGGGATaGGGTCTGGACCGTCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LCHHQESTKQGTIGKTTYRLQRG*GLDRRR Trigger: GCGGCGACGGTCCAGACCCCATCCCCTCTGTAGCCG...GTATGTTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263921.8 |
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| CDS-3UTR TCA 90 bp | TTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACATACCGAAATCCGCCATCCTaGGCCTCCGAGCTCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LCHHQESTKQGTIGKTTYRNPPS*ASELPC Trigger: GCAGGGGAGCTCGGAGGCTCAGGATGGCGGATTTCG...GTATGTTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263921.8 |
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| CDS-3UTR TCA 90 bp | AATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACGGTCCGGCGAGTACTTaGGCAGCTGCTCCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NVMSPPGEHQARHHWKDNGPAST*AAAPPG Trigger: CCCTGGAGGAGCAGCTGCTCAAGTACTCGCCGGACC...GTTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR TCA 90 bp | ATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACATACTTCCAAATACGGTGACGTaGCCGGAGCCGCGGACGACC | + |
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Preference number: 4 (lower is better) Translates to: MSPPGEHQARHHWKDNILPNTVT*PEPRTT Trigger: GGTCGTCCGCGGCTCCGGTCACGTCACCGTATTTGG...AAGTATGTTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR TCA 90 bp | AACACCACACGATTCTGTAGAACCAATGTTATGTCACCACCAGGAGAGCACCAAGGTCCGGCGAGTACTTaGGCAGCTGCTCCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NTTRFCRTNVMSPPGEHQGPAST*AAAPPG Trigger: CCCTGGAGGAGCAGCTGCTCAAGTACTCGCCGGACC...TTGGTGCTCTCCTGGTGGTGACATAACATTGGTTCTACAGAATCGTGTGGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR TCA 90 bp | AACACCACACGATTCTGTAGAACCAATGTTATGTCACCACCAGGAGAGCACCAACCAAATACGGTGACGTaGCCGGAGCCGCGGACGACC | + |
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Preference number: 4 (lower is better) Translates to: NTTRFCRTNVMSPPGEHQPNTVT*PEPRTT Trigger: GGTCGTCCGCGGCTCCGGTCACGTCACCGTATTTGG...TTGGTGCTCTCCTGGTGGTGACATAACATTGGTTCTACAGAATCGTGTGGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR TCA 90 bp | CACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACATACTTGGAATCAGTCCAAATACGGTaGCGTGACCGGAGCCGCGGA | + |
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Preference number: 4 (lower is better) Translates to: HHQESTKQGTIGKTTYLESVQIR*RDRSRG Trigger: TCCGCGGCTCCGGTCACGTCACCGTATTTGGACTGA...TTCCAAGTATGTTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR TCA 90 bp | CCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACATCAGTCCAAATACGGTaGCGTGACCGGAGCCGCGGA | + |
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Preference number: 4 (lower is better) Translates to: PMLCHHQESTKQGTIGKTSVQIR*RDRSRG Trigger: TCCGCGGCTCCGGTCACGTCACCGTATTTGGACTGA...TGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR TCA 90 bp | CAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAATCAGTCCAAATACGGTaGCGTGACCGGAGCCGCGGA | + |
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Preference number: 4 (lower is better) Translates to: QCYVTTRRAPSKAPLERQSVQIR*RDRSRG Trigger: TCCGCGGCTCCGGTCACGTCACCGTATTTGGACTGA...TTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR GCA 90 bp | CAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAATACTGCAACCTAATGTaGAGCAGCAACAAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QCYVTTRRAPSKAPLERQYCNLM*SSNKGS Trigger: GCTGCCTTTGTTGCTGCTGCACATTAGGTTGCAGTA...TTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263921.8 ENST00000512964.5 |
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| CDS-3UTR GCA 90 bp | CACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACATACTTGGAATTGCTCAGTCTCCAATaGAAGCACAGCTTGTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: HHQESTKQGTIGKTTYLELLSLQ*KHSLWY Trigger: ATACCACAAGCTGTGCTTGCATTGGAGACTGAGCAA...TTCCAAGTATGTTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263921.8 ENST00000510894.1 |
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| CDS-3UTR GCA 90 bp | TTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACATACTTGCTCAGTCTCCAATaGAAGCACAGCTTGTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LCHHQESTKQGTIGKTTYLLSLQ*KHSLWY Trigger: ATACCACAAGCTGTGCTTGCATTGGAGACTGAGCAA...GTATGTTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263921.8 ENST00000510894.1 |
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| CDS-3UTR GCA 90 bp | GATTCTGTAGAACCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCTTGCTCAGTCTCCAATaGAAGCACAGTCTTTTACTG | + |
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Preference number: 4 (lower is better) Translates to: DSVEPMLCHHQESTKQGTLLSLQ*KHSLLL Trigger: CAGTAAAAGACTGTGCTTGCATTGGAGACTGAGCAA...GGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGGTTCTACAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512964.5 |
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| CDS-3UTR GCA 90 bp | AAAAACACCACACGATTCTGTAGAACCAATGTTATGTCACCACCAGGAGAGCACTACTGCAACCTAATGTaGAGCAGCAACAAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KNTTRFCRTNVMSPPGEHYCNLM*SSNKGS Trigger: GCTGCCTTTGTTGCTGCTGCACATTAGGTTGCAGTA...GTGCTCTCCTGGTGGTGACATAACATTGGTTCTACAGAATCGTGTGGTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000263921.8 ENST00000512964.5 |
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| CDS-3UTR CCA 90 bp | CCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACATGCAAGCACAGCTTGTaGTATAACCTATTGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PMLCHHQESTKQGTIGKTCKHSL*YNLLFS Trigger: GGAAAACAATAGGTTATACCACAAGCTGTGCTTGCA...TGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263921.8 ENST00000510894.1 |
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| CDS-3UTR CCA 90 bp | CCACACGATTCTGTAGAACCAATGTTATGTCACCACCAGGAGAGCACCAAGCAATGCAAGCACAGCTTGTaGTATAACCTATTGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PHDSVEPMLCHHQESTKQCKHSL*YNLLFS Trigger: GGAAAACAATAGGTTATACCACAAGCTGTGCTTGCA...TTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGGTTCTACAGAATCGTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263921.8 ENST00000510894.1 |
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| CDS TCA 90 bp | CCTCGTCCTCCTCTTCCTCATAGATTTCGTCGAAATCCGCCATCCTaGGCCTCCGAGCTCCCCTGCCCAAAGGGCCTGACTCCCGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: PRPPLPHRFRRNPPS*ASELPCPKGLTPGV Trigger: AACCCCGGGAGTCAGGCCCTTTGGGCAGGGGAGCTCGGAGGCTCAGGATGGCGGATTTCGACGAAATCTATGAGGAAGAGGAGGACGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263921.8 |
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| CDS-3UTR CAA 90 bp | CCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAGGGTCCGGCGAGTACTaGAGCAGCTGCTCCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PMLCHHQESTKQGTIGKTGSGEY*SSCSSR Trigger: CCTGGAGGAGCAGCTGCTCAAGTACTCGCCGGACCC...TGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR CAA 90 bp | AATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACGGGTCCGGCGAGTACTaGAGCAGCTGCTCCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NVMSPPGEHQARHHWKDNGSGEY*SSCSSR Trigger: CCTGGAGGAGCAGCTGCTCAAGTACTCGCCGGACCC...GTTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR CAA 90 bp | AAAAACACCACACGATTCTGTAGAACCAATGTTATGTCACCACCAGGAGAGCACGGGTCCGGCGAGTACTaGAGCAGCTGCTCCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KNTTRFCRTNVMSPPGEHGSGEY*SSCSSR Trigger: CCTGGAGGAGCAGCTGCTCAAGTACTCGCCGGACCC...GTGCTCTCCTGGTGGTGACATAACATTGGTTCTACAGAATCGTGTGGTGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR CAA 90 bp | CACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACATACTTGGAAGTTTCACATTTCCTTTaGCTCAGTCTCCAATGCAAG | + |
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Preference number: 5 (lower is better) Translates to: HHQESTKQGTIGKTTYLEVSHFL*LSLQCK Trigger: CTTGCATTGGAGACTGAGCAAAAGGAAATGTGAAAC...TTCCAAGTATGTTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR CAA 90 bp | CCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACATCAGATTCAAATTTGTaGCTCAGTCCAAATACGGTG | + |
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Preference number: 5 (lower is better) Translates to: PMLCHHQESTKQGTIGKTSDSNL*LSPNTV Trigger: CACCGTATTTGGACTGAGCAACAAATTTGAATCTGA...TGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR CAA 90 bp | CGATTCTGTAGAACCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACTCAGATTCAAATTTGTaGCTCAGTCCAAATACGGTG | + |
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Preference number: 5 (lower is better) Translates to: RFCRTNVMSPPGEHQARHSDSNL*LSPNTV Trigger: CACCGTATTTGGACTGAGCAACAAATTTGAATCTGA...GTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGGTTCTACAGAATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR CAA 90 bp | GATTCTGTAGAACCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCCAATGCAAGCACAGCTaGTGGTATAACCTATTGTTT | + |
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Preference number: 5 (lower is better) Translates to: DSVEPMLCHHQESTKQGTQCKHS*WYNLLF Trigger: AAACAATAGGTTATACCACAAGCTGTGCTTGCATTG...GGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGGTTCTACAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263921.8 ENST00000510894.1 |
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| CDS-3UTR CAA 90 bp | ATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAACAGTTTCACATTTCCTTTaGCTCAGTCTCCAATGCAAG | + |
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Preference number: 5 (lower is better) Translates to: MLCHHQESTKQGTIGKTTVSHFL*LSLQCK Trigger: CTTGCATTGGAGACTGAGCAAAAGGAAATGTGAAAC...TGTTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR CAA 90 bp | ACCACACGATTCTGTAGAACCAATGTTATGTCACCACCAGGAGAGCACCAAGCAGTTTCACATTTCCTTTaGCTCAGTCTCCAATGCAAG | + |
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Preference number: 5 (lower is better) Translates to: TTRFCRTNVMSPPGEHQAVSHFL*LSLQCK Trigger: CTTGCATTGGAGACTGAGCAAAAGGAAATGTGAAAC...TGCTTGGTGCTCTCCTGGTGGTGACATAACATTGGTTCTACAGAATCGTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000263921.8 ENST00000510894.1 ENST00000512964.5 |
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| CDS-3UTR CAA 90 bp | AACCAATGTTATGTCACCACCAGGAGAGCACCAAGCAAGGCACCATTGGAAAGACAATGCAAGCACAGCTaGTGGTATAACCTATTGTTT | + |
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Preference number: 5 (lower is better) Translates to: NQCYVTTRRAPSKAPLERQCKHS*WYNLLF Trigger: AAACAATAGGTTATACCACAAGCTGTGCTTGCATTG...TCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGGTGACATAACATTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263921.8 ENST00000510894.1 |
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| CDS TCA 72 bp | CCTCTTCCTCATAGATTTCGTCGAAATCCGCCATCCTaGGCCTCCGAGCTCCCCTGCCCAAAGGGCCTGACT | + |
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Preference number: 6 (lower is better) Translates to: PLPHRFRRNPPS*ASELPCPKGLT Trigger: AGTCAGGCCCTTTGGGCAGGGGAGCTCGGAGGCTCAGGATGGCGGATTTCGACGAAATCTATGAGGAAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263921.8 |
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