RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHIA (Homo sapiens)

Ensembl gene IDs: ENSG00000134216

Ensembl transcript IDs: ENST00000343320.10, ENST00000352594.10, ENST00000369740.6, ENST00000422815.5, ENST00000430615.1, ENST00000451398.6, ENST00000477918.6, ENST00000483391.5

Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCTCCCGTTCCCGCTGCCACTGGGAGCAGCAGTTATTGGCTCAATaGGCTGAGCTGGAGCCGTGCAACTTGCACTCTGCAGGCCGAGGG +
Preference number: 1 (lower is better)
Translates to: RSRSRCHWEQQLLAQ*AELEPCNLHSAGRG
Trigger: CCCTCGGCCTGCAGAGTGCAAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGTGGCAGCGGGAACGGGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR CCA 90 bp GCTACTCCCGCTCCCGTTCCCGCTGCCACTGGGAGCAGCAGTTATTaGCTCAATGGGCTGAGCTGGAGCCGTGCAACTTGCACTCTGCAG +
Preference number: 1 (lower is better)
Translates to: ATPAPVPAATGSSSY*LNGLSWSRATCTLQ
Trigger: CTGCAGAGTGCAAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGTGGCAGCGGGAACGGGAGCGGGAGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR CCA 90 bp GCCCAGTTGCAGCAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTaGCAGTTCTGCTGGTACGTGACTCCATTCACGCAGTGCCAGAAG +
Preference number: 1 (lower is better)
Translates to: AQLQQSQLVSKTSPA*QFCWYVTPFTQCQK
Trigger: CTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTGCTGCAACTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR GCA 90 bp CAGCAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTaGTGGTACGTGACTCCATTCACGCAGTGCCAGAAGGCATTTCTG +
Preference number: 1 (lower is better)
Translates to: QQSQLVSKTSPAWQF*WYVTPFTQCQKAFL
Trigger: CAGAAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR TCA 90 bp AGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGGTACGTaGCTCCATTCACGCAGTGCCAGAAGGCATTTCTGTTATTTGCCA +
Preference number: 1 (lower is better)
Translates to: SWCRRQARPGSSAGT*LHSRSARRHFCYLP
Trigger: TGGCAAATAACAGAAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR CCA 90 bp CAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTaGTACGTGACTCCATTCACGCAGTGCCAGAAGGCATTTCTGTTA +
Preference number: 1 (lower is better)
Translates to: QSQLVSKTSPAWQFC*YVTPFTQCQKAFLL
Trigger: TAACAGAAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR CAA 90 bp TGCTACTCCCGCTCCCGTTCCCGCTGCCACTGGGAGCAGCAGTTATaGGCTCAATGGGCTGAGCTGGAGCCGTGCAACTTGCACTCTGCA +
Preference number: 2 (lower is better)
Translates to: CYSRSRSRCHWEQQL*AQWAELEPCNLHSA
Trigger: TGCAGAGTGCAAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGTGGCAGCGGGAACGGGAGCGGGAGTAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR GCA 90 bp GTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGGTACGTGACTCCATTCACGCATGGAGCCGTGCAACTTaGACTCTGCAGGCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: VEDKPGLAVLLVRDSIHAWSRAT*TLQAEG
Trigger: GCCCTCGGCCTGCAGAGTGCAAGTTGCACGGCTCCA...TGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR CCA 90 bp GCCTGGCAGTTCTGCTGGTACGTGACTCCATTCACGCAGTGCCAGAAGGCATTTAGATCCCAGACTCCTTaGCATAGGGCCCAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: AWQFCWYVTPFTQCQKAFRSQTP*HRAQQD
Trigger: GTCCTGCTGGGCCCTATGCCAAGGAGTCTGGGATCT...AAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR CCA 90 bp CAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGGTACGTGGGGCCTTCTTCAGGGTaGAGATTAGGGGAAACTTGC +
Preference number: 2 (lower is better)
Translates to: QSQLVSKTSPAWQFCWYVGPSSG*RLGETC
Trigger: GCAAGTTTCCCCTAATCTCCACCCTGAAGAAGGCCC...CACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR GCA 90 bp CAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGGTACGTGGGCATTTCTGTTATTTaGCACGGGGTAGAGGCCGTT +
Preference number: 2 (lower is better)
Translates to: QSQLVSKTSPAWQFCWYVGISVI*HGVEAV
Trigger: AACGGCCTCTACCCCGTGGCAAATAACAGAAATGCC...CACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR CCA 90 bp CAGGAAGGTACAGATCTCGTAGTAAGCCCAGATCCCAGACTCCTTGGCATAGGGGACCAGCACCAGAGGTaGGGGCACCAATTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: QEGTDLVVSPDPRLLGIGDQHQR*GHQFQC
Trigger: ACACTGGAATTGGTGCCCCCACCTCTGGTGCTGGTC...CCCTATGCCAAGGAGTCTGGGATCTGGGCTTACTACGAGATCTGTACCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR TCA 90 bp GCAGTGCCAGAAGGCATTTCTGTTATTTGCCACGGGGTAGAGGCCGTTGGCTCTGTAGTCCAGGTACTGTaGCAGTTGGGGGATCTCATA +
Preference number: 2 (lower is better)
Translates to: AVPEGISVICHGVEAVGSVVQVL*QLGDLI
Trigger: TATGAGATCCCCCAACTGTCACAGTACCTGGACTAC...AGAGCCAACGGCCTCTACCCCGTGGCAAATAACAGAAATGCCTTCTGGCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR GCA 90 bp AGTTGCAGCAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTAGATTAGGGGAAACTTaGCCTGGTTGCAGAAAGTGC +
Preference number: 2 (lower is better)
Translates to: SCSNHSWCRRQARPGSSARLGET*PGCRKC
Trigger: GCACTTTCTGCAACCAGGGCAAGTTTCCCCTAATCT...AGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTGCTGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR GCA 90 bp GCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGGTTTATGCCCAGTCACTGCCTCCCGAGCTaGCTCCAGAGCTGCTACTCC +
Preference number: 2 (lower is better)
Translates to: AKETGTLGNIDQVRFMPSHCLPS*LQSCYS
Trigger: GGAGTAGCAGCTCTGGAGGCAGCTCGGGAGGCAGTG...ACTGGGCATAAACCTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR GCA 90 bp CTCCATTCACGCAGTGCCAGAAGGCATTTCTGTTATTTGCCACGGGGTAGAGGCAGCCAACCCACACATTaGCCTGATAGGCATAAGGCA +
Preference number: 2 (lower is better)
Translates to: LHSRSARRHFCYLPRGRGSQPTH*PDRHKA
Trigger: TGCCTTATGCCTATCAGGGCAATGTGTGGGTTGGCT...GCCTCTACCCCGTGGCAAATAACAGAAATGCCTTCTGGCACTGCGTGAATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR CCA 90 bp TTCTGCTGGTACGTGACTCCATTCACGCAGTGCCAGAAGGCATTTCTGTTATTTCGTTCCCGCTGCCACTaGGAGCAGCAGTTATTGGCT +
Preference number: 2 (lower is better)
Translates to: FCWYVTPFTQCQKAFLLFRSRCH*EQQLLA
Trigger: AGCCAATAACTGCTGCTCCCAGTGGCAGCGGGAACG...AAATAACAGAAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR TCA 90 bp GCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGGTTTATGCCCAGTATTGGCTCAATGGGCTaGGCTGGAGCCGTGCAACTT +
Preference number: 2 (lower is better)
Translates to: AKETGTLGNIDQVRFMPSIGSMG*AGAVQL
Trigger: AAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAAT...ACTGGGCATAAACCTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR CCA 90 bp GTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGGTACGTGACTCCATTCACGCACTAAGCAAAAGAGACTaGAACTCTAGGGAATATAGA +
Preference number: 2 (lower is better)
Translates to: VEDKPGLAVLLVRDSIHALSKRD*NSREYR
Trigger: TCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAG...TGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR CCA 72 bp GCTCCCGTTCCCGCTGCCACTGGGAGCAGCAGTTATTaGCTCAATGGGCTGAGCTGGAGCCGTGCAACTTGC +
Preference number: 3 (lower is better)
Translates to: APVPAATGSSSY*LNGLSWSRATC
Trigger: GCAAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGTGGCAGCGGGAACGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR CCA 72 bp CAGAGCTGCTACTCCCGCTCCCGTTCCCGCTGCCACTaGGAGCAGCAGTTATTGGCTCAATGGGCTGAGCTG +
Preference number: 3 (lower is better)
Translates to: QSCYSRSRSRCH*EQQLLAQWAEL
Trigger: CAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGTGGCAGCGGGAACGGGAGCGGGAGTAGCAGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR TCA 72 bp CTGCCACTGGGAGCAGCAGTTATTGGCTCAATGGGCTaGGCTGGAGCCGTGCAACTTGCACTCTGCAGGCCG +
Preference number: 3 (lower is better)
Translates to: LPLGAAVIGSMG*AGAVQLALCRP
Trigger: CGGCCTGCAGAGTGCAAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR CCA 72 bp ACTGGGAGCAGCAGTTATTGGCTCAATGGGCTGAGCTaGAGCCGTGCAACTTGCACTCTGCAGGCCGAGGGC +
Preference number: 3 (lower is better)
Translates to: TGSSSYWLNGLS*SRATCTLQAEG
Trigger: GCCCTCGGCCTGCAGAGTGCAAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR GCA 72 bp CAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTaGTGGTACGTGACTCCATTCACGCAGTGCCAGAAG +
Preference number: 3 (lower is better)
Translates to: QLVSKTSPAWQF*WYVTPFTQCQK
Trigger: CTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR CCA 72 bp TCCCGCTGCCACTGGGAGCAGCAGTTATTGGCTCAATaGGCTGAGCTGGAGCCGTGCAACTTGCACTCTGCA +
Preference number: 3 (lower is better)
Translates to: SRCHWEQQLLAQ*AELEPCNLHSA
Trigger: TGCAGAGTGCAAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGTGGCAGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR CCA 72 bp CTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTaGTACGTGACTCCATTCACGCAGTGCCAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: LVSKTSPAWQFC*YVTPFTQCQKA
Trigger: TGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR CCA 72 bp CAGCAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTaGCAGTTCTGCTGGTACGTGACTCCATTCACGCAG +
Preference number: 3 (lower is better)
Translates to: QQSQLVSKTSPA*QFCWYVTPFTQ
Trigger: CTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR CAA 90 bp AGTTGCAGCAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTTGGGAGCAGCAGTTATaGGCTCAATGGGCTGAGCTG +
Preference number: 3 (lower is better)
Translates to: SCSNHSWCRRQARPGSSAWEQQL*AQWAEL
Trigger: CAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCA...AGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTGCTGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR TCA 72 bp CGAAGACAAGCCCGGCCTGGCAGTTCTGCTGGTACGTaGCTCCATTCACGCAGTGCCAGAAGGCATTTCTGT +
Preference number: 3 (lower is better)
Translates to: RRQARPGSSAGT*LHSRSARRHFC
Trigger: ACAGAAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR CAA 90 bp AGTTGCAGCAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGAGATTAGGGGAAACTaGCCCTGGTTGCAGAAAGTG +
Preference number: 3 (lower is better)
Translates to: SCSNHSWCRRQARPGSSAEIRGN*PWLQKV
Trigger: CACTTTCTGCAACCAGGGCAAGTTTCCCCTAATCTC...AGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTGCTGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR CAA 90 bp TTCTGCTGGTACGTGACTCCATTCACGCAGTGCCAGAAGGCATTTCTGTTATTTCTGGAGCCGTGCAACTaGCACTCTGCAGGCCGAGGG +
Preference number: 3 (lower is better)
Translates to: FCWYVTPFTQCQKAFLLFLEPCN*HSAGRG
Trigger: CCCTCGGCCTGCAGAGTGCAAGTTGCACGGCTCCAG...AAATAACAGAAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR GCA 72 bp TCCATTCACGCAGTGCCAGAAGGCATTTCTGTTATTTaGCACGGGGTAGAGGCCGTTGGCTCTGACAGCACA +
Preference number: 3 (lower is better)
Translates to: SIHAVPEGISVI*HGVEAVGSDST
Trigger: TGTGCTGTCAGAGCCAACGGCCTCTACCCCGTGGCAAATAACAGAAATGCCTTCTGGCACTGCGTGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR CAA 90 bp AGTTGCAGCAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGTTGTGCTTAAGCCATaGAGCCTTAATATCGAAGCT +
Preference number: 3 (lower is better)
Translates to: SCSNHSWCRRQARPGSSAVVLKP*SLNIEA
Trigger: AGCTTCGATATTAAGGCTCAATGGCTTAAGCACAAC...AGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTGCTGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR-3UTR CAA 90 bp GTGCTTAAGCCATTGAGCCTTAATATCGAAGCTCTTGATGTTGTCATAGCCAACCCAGTGTTGGAGGGGTaGCTCAGGATGAAGTTGTGT +
Preference number: 3 (lower is better)
Translates to: VLKPLSLNIEALDVVIANPVLEG*LRMKLC
Trigger: ACACAACTTCATCCTGAGCAACCCCTCCAACACTGG...GTTGGCTATGACAACATCAAGAGCTTCGATATTAAGGCTCAATGGCTTAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
3UTR CAA 72 bp CGCTCCCGTTCCCGCTGCCACTGGGAGCAGCAGTTATaGGCTCAATGGGCTGAGCTGGAGCCGTGCAACTTG +
Preference number: 4 (lower is better)
Translates to: RSRSRCHWEQQL*AQWAELEPCNL
Trigger: CAAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGTGGCAGCGGGAACGGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR TCA 90 bp CTTGGCATAGGGCCCAGCAGGACCAGCACCAGAGGTGGGGGCACCAATTCCAGTAGTTCTGCTGGTACGTaGCTCCATTCACGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LGIGPSRTSTRGGGTNSSSSAGT*LHSRSA
Trigger: GGCACTGCGTGAATGGAGTCACGTACCAGCAGAACT...ACTGGAATTGGTGCCCCCACCTCTGGTGCTGGTCCTGCTGGGCCCTATGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp ATAGGGCCCAGCAGGACCAGCACCAGAGGTGGGGGCACCAATTCCAGTGTTGGAGACCAGCACCAGAGGTaGGGGCACCAATTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: IGPSRTSTRGGGTNSSVGDQHQR*GHQFQC
Trigger: ACACTGGAATTGGTGCCCCCACCTCTGGTGCTGGTC...TCCAACACTGGAATTGGTGCCCCCACCTCTGGTGCTGGTCCTGCTGGGCCCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR GCA 90 bp GCCTGGCAGTTCTGCTGGTACGTGACTCCATTCACGCAGTGCCAGAAGGCATTTTGGAGCCGTGCAACTTaGACTCTGCAGGCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: AWQFCWYVTPFTQCQKAFWSRAT*TLQAEG
Trigger: GCCCTCGGCCTGCAGAGTGCAAGTTGCACGGCTCCA...AAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR GCA 90 bp TGCCACTGGGAGCAGCAGTTATTGGCTCAATGGGCTGAGCTGGAGCCGTGCAACCCGGCCTGGCAGTTCTaGTGGTACGTGACTCCATTC +
Preference number: 4 (lower is better)
Translates to: CHWEQQLLAQWAELEPCNPAWQF*WYVTPF
Trigger: GAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGG...GTTGCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp ATAGGGCCCAGCAGGACCAGCACCAGAGGTGGGGGCACCAATTCCAGTGTTGGAAGGGGAAACTTGCCCTaGTTGCAGAAAGTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: IGPSRTSTRGGGTNSSVGRGNLP*LQKVPV
Trigger: CACTGGCACTTTCTGCAACCAGGGCAAGTTTCCCCT...TCCAACACTGGAATTGGTGCCCCCACCTCTGGTGCTGGTCCTGCTGGGCCCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp CAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGGTACGTGTGCAGCAATCACAGCTaGTGTCGAAGACAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: QSQLVSKTSPAWQFCWYVCSNHS*CRRQAR
Trigger: CCGGGCTTGTCTTCGACACCAGCTGTGATTGCTGCA...CACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR GCA 90 bp ATAGGGCCCAGCAGGACCAGCACCAGAGGTGGGGGCACCAATTCCAGTGTTGGAGGCATTTCTGTTATTTaGCACGGGGTAGAGGCCGTT +
Preference number: 4 (lower is better)
Translates to: IGPSRTSTRGGGTNSSVGGISVI*HGVEAV
Trigger: AACGGCCTCTACCCCGTGGCAAATAACAGAAATGCC...TCCAACACTGGAATTGGTGCCCCCACCTCTGGTGCTGGTCCTGCTGGGCCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp CCCACACATTGCCCTGATAGGCATAAGGCACTTCCTGAGGGGCATCCCATCCCTCTCAATGGGCTGAGCTaGAGCCGTGCAACTTGCACT +
Preference number: 4 (lower is better)
Translates to: PTHCPDRHKALPEGHPIPLNGLS*SRATCT
Trigger: AGTGCAAGTTGCACGGCTCCAGCTCAGCCCATTGAG...AGGGATGGGATGCCCCTCAGGAAGTGCCTTATGCCTATCAGGGCAATGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp GCCTGGCAGTTCTGCTGGTACGTGACTCCATTCACGCAGTGCCAGAAGGCATTTGCCTGGCAGTTCTGCTaGTACGTGACTCCATTCACG +
Preference number: 4 (lower is better)
Translates to: AWQFCWYVTPFTQCQKAFAWQFC*YVTPFT
Trigger: CGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGC...AAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTTGGAGCCGTGCAACTTaGACTCTGCAGGCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGWSRAT*TLQAEG
Trigger: GCCCTCGGCCTGCAGAGTGCAAGTTGCACGGCTCCA...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCGCTCCCGTTCCCGCTaGCACTGGGAGCAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGRSRSR*HWEQQL
Trigger: TAACTGCTGCTCCCAGTGGCAGCGGGAACGGGAGCG...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTAGCTGCCTCCAGAGCTaGTACTCCCGCTCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGSCLQS*YSRSRS
Trigger: GGAACGGGAGCGGGAGTAGCAGCTCTGGAGGCAGCT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp GCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGGTTTATGCCCAGTAGCTGCCTCCAGAGCTaGTACTCCCGCTCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: AKETGTLGNIDQVRFMPSSCLQS*YSRSRS
Trigger: GGAACGGGAGCGGGAGTAGCAGCTCTGGAGGCAGCT...ACTGGGCATAAACCTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCACTGCCTCCCGAGCTaGCTCCAGAGCTGCTACTCC +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGHCLPS*LQSCYS
Trigger: GGAGTAGCAGCTCTGGAGGCAGCTCGGGAGGCAGTG...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp AGTTGCAGCAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTAAGCAATGGACTCTGTaGCCAAACTGCAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SCSNHSWCRRQARPGSSAKQWTL*PNCRGS
Trigger: ACTTCCTCTGCAGTTTGGCCACAGAGTCCATTGCTT...AGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTGCTGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGTGGAGCCGTGCAACTTaGACTCTGCAGGCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQWSRAT*TLQAEG
Trigger: GCCCTCGGCCTGCAGAGTGCAAGTTGCACGGCTCCA...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGCGCTCCCGTTCCCGCTaGCACTGGGAGCAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQRSRSR*HWEQQL
Trigger: TAACTGCTGCTCCCAGTGGCAGCGGGAACGGGAGCG...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp AAGCCATTGAGCCTTAATATCGAAGCTCTTGATGTTGTCATAGCCAACCCACACCGCTCCCGTTCCCGCTaGCACTGGGAGCAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: KPLSLNIEALDVVIANPHRSRSR*HWEQQL
Trigger: TAACTGCTGCTCCCAGTGGCAGCGGGAACGGGAGCG...GTGTGGGTTGGCTATGACAACATCAAGAGCTTCGATATTAAGGCTCAATGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGAGCTGCCTCCAGAGCTaGTACTCCCGCTCCCGTTCC +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQSCLQS*YSRSRS
Trigger: GGAACGGGAGCGGGAGTAGCAGCTCTGGAGGCAGCT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGCACTGCCTCCCGAGCTaGCTCCAGAGCTGCTACTCC +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQHCLPS*LQSCYS
Trigger: GGAGTAGCAGCTCTGGAGGCAGCTCGGGAGGCAGTG...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp GTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGGTACGTGACTCCATTCACGCATTTAGTTTCCTCATCTaGACCAGGACAGTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VEDKPGLAVLLVRDSIHAFSFLI*TRTVKR
Trigger: TCTCTTCACTGTCCTGGTGCAGATGAGGAAACTAAA...TGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTTGGAAAGCAACAGCCTaGGCTCCAGAGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGWKATA*APESAT
Trigger: GGTGGCCGACTCTGGAGCCCAGGCTGTTGCTTTCCA...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369740.6
ENST00000422815.5
ENST00000483391.5
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCCGGCCTGGCAGTTCTaGTGGTACGTGACTCCATTC +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGPAWQF*WYVTPF
Trigger: GAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGG...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp CAGGAAGGTACAGATCTCGTAGTAAGCCCAGATCCCAGACTCCTTGGCATAGGGACCAGGTCAGGTTTATaGCCAGTTGCAGCAATCACA +
Preference number: 4 (lower is better)
Translates to: QEGTDLVVSPDPRLLGIGTRSGL*PVAAIT
Trigger: TGTGATTGCTGCAACTGGGCATAAACCTGACCTGGT...CCCTATGCCAAGGAGTCTGGGATCTGGGCTTACTACGAGATCTGTACCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTGACCAGCACCAGAGGTaGGGGCACCAATTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGDQHQR*GHQFQC
Trigger: ACACTGGAATTGGTGCCCCCACCTCTGGTGCTGGTC...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTAGATCCCAGACTCCTTaGCATAGGGCCCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGRSQTP*HRAQQD
Trigger: GTCCTGCTGGGCCCTATGCCAAGGAGTCTGGGATCT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCGTTCCCGCTGCCACTaGGAGCAGCAGTTATTGGCT +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGRSRCH*EQQLLA
Trigger: AGCCAATAACTGCTGCTCCCAGTGGCAGCGGGAACG...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTAAGACAAGCCCGGCCTaGCAGTTCTGCTGGTACGTG +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGKTSPA*QFCWYV
Trigger: CACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGTGGAAAGCAACAGCCTaGGCTCCAGAGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQWKATA*APESAT
Trigger: GGTGGCCGACTCTGGAGCCCAGGCTGTTGCTTTCCA...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369740.6
ENST00000422815.5
ENST00000483391.5
CDS-3UTR TCA 90 bp TTCTGCTGGTACGTGACTCCATTCACGCAGTGCCAGAAGGCATTTCTGTTATTTATTGGCTCAATGGGCTaGGCTGGAGCCGTGCAACTT +
Preference number: 4 (lower is better)
Translates to: FCWYVTPFTQCQKAFLLFIGSMG*AGAVQL
Trigger: AAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAAT...AAATAACAGAAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR TCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTAGTTCTGCTGGTACGTaGCTCCATTCACGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGSSAGT*LHSRSA
Trigger: GGCACTGCGTGAATGGAGTCACGTACCAGCAGAACT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGCCGGCCTGGCAGTTCTaGTGGTACGTGACTCCATTC +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQPAWQF*WYVTPF
Trigger: GAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGG...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp CAGGAAGGTACAGATCTCGTAGTAAGCCCAGATCCCAGACTCCTTGGCATAGGGCTGGCTGTTCCGAGCTaGAAATTCAGTATAAGGACA +
Preference number: 4 (lower is better)
Translates to: QEGTDLVVSPDPRLLGIGLAVPS*KFSIRT
Trigger: TGTCCTTATACTGAATTTGCAGCTCGGAACAGCCAG...CCCTATGCCAAGGAGTCTGGGATCTGGGCTTACTACGAGATCTGTACCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGGACCAGCACCAGAGGTaGGGGCACCAATTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQDQHQR*GHQFQC
Trigger: ACACTGGAATTGGTGCCCCCACCTCTGGTGCTGGTC...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCTCAATGGGCTGAGCTaGAGCCGTGCAACTTGCACT +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGLNGLS*SRATCT
Trigger: AGTGCAAGTTGCACGGCTCCAGCTCAGCCCATTGAG...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGTTATTGGCTCAATaGGCTGAGCTGGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGQLLAQ*AELEPC
Trigger: GCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTG...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGCGTTCCCGCTGCCACTaGGAGCAGCAGTTATTGGCT +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQRSRCH*EQQLLA
Trigger: AGCCAATAACTGCTGCTCCCAGTGGCAGCGGGAACG...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTGCCTGGCAGTTCTGCTaGTACGTGACTCCATTCACG +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGAWQFC*YVTPFT
Trigger: CGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGC...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGAAGACAAGCCCGGCCTaGCAGTTCTGCTGGTACGTG +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQKTSPA*QFCWYV
Trigger: CACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTTGCAGCAATCACAGCTaGTGTCGAAGACAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGCSNHS*CRRQAR
Trigger: CCGGGCTTGTCTTCGACACCAGCTGTGATTGCTGCA...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp TGCCACTGGGAGCAGCAGTTATTGGCTCAATGGGCTGAGCTGGAGCCGTGCAACCTAAGCAAAAGAGACTaGAACTCTAGGGAATATAGA +
Preference number: 4 (lower is better)
Translates to: CHWEQQLLAQWAELEPCNLSKRD*NSREYR
Trigger: TCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAG...GTTGCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR TCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGATTGGCTCAATGGGCTaGGCTGGAGCCGTGCAACTT +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQIGSMG*AGAVQL
Trigger: AAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAAT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR TCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGAGTTCTGCTGGTACGTaGCTCCATTCACGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQSSAGT*LHSRSA
Trigger: GGCACTGCGTGAATGGAGTCACGTACCAGCAGAACT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTAAGCTTTGTCATGGTTaGAGTCAGCACCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGKLCHG*SQHQSR
Trigger: GCGGGACTGGTGCTGACTGCAACCATGACAAAGCTT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343320.10
ENST00000369740.6
ENST00000451398.6
CDS-3UTR CCA 90 bp GTGCTTAAGCCATTGAGCCTTAATATCGAAGCTCTTGATGTTGTCATAGCCAACAGATCCCAGACTCCTTaGCATAGGGCCCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VLKPLSLNIEALDVVIANRSQTP*HRAQQD
Trigger: GTCCTGCTGGGCCCTATGCCAAGGAGTCTGGGATCT...GTTGGCTATGACAACATCAAGAGCTTCGATATTAAGGCTCAATGGCTTAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTAGGGGAAACTTGCCCTaGTTGCAGAAAGTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGRGNLP*LQKVPV
Trigger: CACTGGCACTTTCTGCAACCAGGGCAAGTTTCCCCT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTGGGCCTTCTTCAGGGTaGAGATTAGGGGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGGPSSG*RLGETC
Trigger: GCAAGTTTCCCCTAATCTCCACCCTGAAGAAGGCCC...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp TTCTGCTGGTACGTGACTCCATTCACGCAGTGCCAGAAGGCATTTCTGTTATTTGGGCCTTCTTCAGGGTaGAGATTAGGGGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: FCWYVTPFTQCQKAFLLFGPSSG*RLGETC
Trigger: GCAAGTTTCCCCTAATCTCCACCCTGAAGAAGGCCC...AAATAACAGAAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGCTCAATGGGCTGAGCTaGAGCCGTGCAACTTGCACT +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQLNGLS*SRATCT
Trigger: AGTGCAAGTTGCACGGCTCCAGCTCAGCCCATTGAG...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGCAGTTATTGGCTCAATaGGCTGAGCTGGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQQLLAQ*AELEPC
Trigger: GCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTG...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGGCCTGGCAGTTCTGCTaGTACGTGACTCCATTCACG +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQAWQFC*YVTPFT
Trigger: CGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGC...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp GTGCTTAAGCCATTGAGCCTTAATATCGAAGCTCTTGATGTTGTCATAGCCAACAAGACAAGCCCGGCCTaGCAGTTCTGCTGGTACGTG +
Preference number: 4 (lower is better)
Translates to: VLKPLSLNIEALDVVIANKTSPA*QFCWYV
Trigger: CACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTT...GTTGGCTATGACAACATCAAGAGCTTCGATATTAAGGCTCAATGGCTTAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGTGCAGCAATCACAGCTaGTGTCGAAGACAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQCSNHS*CRRQAR
Trigger: CCGGGCTTGTCTTCGACACCAGCTGTGATTGCTGCA...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR TCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTGTAGTCCAGGTACTGTaGCAGTTGGGGGATCTCATA +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGVVQVL*QLGDLI
Trigger: TATGAGATCCCCCAACTGTCACAGTACCTGGACTAC...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR TCA 90 bp TTCTGCTGGTACGTGACTCCATTCACGCAGTGCCAGAAGGCATTTCTGTTATTTGTAGTCCAGGTACTGTaGCAGTTGGGGGATCTCATA +
Preference number: 4 (lower is better)
Translates to: FCWYVTPFTQCQKAFLLFVVQVL*QLGDLI
Trigger: TATGAGATCCCCCAACTGTCACAGTACCTGGACTAC...AAATAACAGAAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGAAGCTTTGTCATGGTTaGAGTCAGCACCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQKLCHG*SQHQSR
Trigger: GCGGGACTGGTGCTGACTGCAACCATGACAAAGCTT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343320.10
ENST00000369740.6
ENST00000451398.6
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTGCTTCACGCATTTCCTaGACCAGGACAGTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGASRIS*TRTVKR
Trigger: TCTCTTCACTGTCCTGGTGCAGGAAATGCGTGAAGC...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343320.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTAGCCAACCCACACATTaGCCTGATAGGCATAAGGCA +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGSQPTH*PDRHKA
Trigger: TGCCTTATGCCTATCAGGGCAATGTGTGGGTTGGCT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTGGCATTTCTGTTATTTaGCACGGGGTAGAGGCCGTT +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGGISVI*HGVEAV
Trigger: AACGGCCTCTACCCCGTGGCAAATAACAGAAATGCC...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGAGGGGAAACTTGCCCTaGTTGCAGAAAGTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQRGNLP*LQKVPV
Trigger: CACTGGCACTTTCTGCAACCAGGGCAAGTTTCCCCT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGGGGCCTTCTTCAGGGTaGAGATTAGGGGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQGPSSG*RLGETC
Trigger: GCAAGTTTCCCCTAATCTCCACCCTGAAGAAGGCCC...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp GTGCTTAAGCCATTGAGCCTTAATATCGAAGCTCTTGATGTTGTCATAGCCAACCAGTTATTGGCTCAATaGGCTGAGCTGGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: VLKPLSLNIEALDVVIANQLLAQ*AELEPC
Trigger: GCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTG...GTTGGCTATGACAACATCAAGAGCTTCGATATTAAGGCTCAATGGCTTAAGCAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR TCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGGTAGTCCAGGTACTGTaGCAGTTGGGGGATCTCATA +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQVVQVL*QLGDLI
Trigger: TATGAGATCCCCCAACTGTCACAGTACCTGGACTAC...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGGCTTCACGCATTTCCTaGACCAGGACAGTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQASRIS*TRTVKR
Trigger: TCTCTTCACTGTCCTGGTGCAGGAAATGCGTGAAGC...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343320.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTAGATTAGGGGAAACTTaGCCTGGTTGCAGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGRLGET*PGCRKC
Trigger: GCACTTTCTGCAACCAGGGCAAGTTTCCCCTAATCT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGGGCATTTCTGTTATTTaGCACGGGGTAGAGGCCGTT +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQGISVI*HGVEAV
Trigger: AACGGCCTCTACCCCGTGGCAAATAACAGAAATGCC...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp ATTTTTCAGGAAGGTACAGATCTCGTAGTAAGCCCAGATCCCAGACTCCTTGGCACTCCATTCACGCAGTaGCAGAAGGCATTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: IFQEGTDLVVSPDPRLLGTPFTQ*QKAFLL
Trigger: TAACAGAAATGCCTTCTGGCACTGCGTGAATGGAGT...GCCAAGGAGTCTGGGATCTGGGCTTACTACGAGATCTGTACCTTCCTGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTACCAGGTCAGGTTTATaGCCAGTTGCAGCAATCACA +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGTRSGL*PVAAIT
Trigger: TGTGATTGCTGCAACTGGGCATAAACCTGACCTGGT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTAGGAGAGTTTTCAGCTaGCTGTTCCGAGCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGRRVFS*LFRAAN
Trigger: ATTTGCAGCTCGGAACAGCCAGCTGAAAACTCTCCT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352594.10
ENST00000430615.1
ENST00000451398.6
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTAGGAGAGTTTTCAGCTaGCTGTTCCAGACTATGGAG +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGRRVFS*LFQTME
Trigger: CTCCATAGTCTGGAACAGCCAGCTGAAAACTCTCCT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422815.5
ENST00000483391.5
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGAGATTAGGGGAAACTTaGCCTGGTTGCAGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQRLGET*PGCRKC
Trigger: GCACTTTCTGCAACCAGGGCAAGTTTCCCCTAATCT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp AAGCCATTGAGCCTTAATATCGAAGCTCTTGATGTTGTCATAGCCAACCCACACAGATTAGGGGAAACTTaGCCTGGTTGCAGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: KPLSLNIEALDVVIANPHRLGET*PGCRKC
Trigger: GCACTTTCTGCAACCAGGGCAAGTTTCCCCTAATCT...GTGTGGGTTGGCTATGACAACATCAAGAGCTTCGATATTAAGGCTCAATGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTACTCCATTCACGCAGTaGCAGAAGGCATTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGTPFTQ*QKAFLL
Trigger: TAACAGAAATGCCTTCTGGCACTGCGTGAATGGAGT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGACCAGGTCAGGTTTATaGCCAGTTGCAGCAATCACA +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQTRSGL*PVAAIT
Trigger: TGTGATTGCTGCAACTGGGCATAAACCTGACCTGGT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCTGGCTGTTCCGAGCTaGAAATTCAGTATAAGGACA +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGLAVPS*KFSIRT
Trigger: TGTCCTTATACTGAATTTGCAGCTCGGAACAGCCAG...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352594.10
ENST00000430615.1
ENST00000451398.6
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGAGGAGAGTTTTCAGCTaGCTGTTCCGAGCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQRRVFS*LFRAAN
Trigger: ATTTGCAGCTCGGAACAGCCAGCTGAAAACTCTCCT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352594.10
ENST00000430615.1
ENST00000451398.6
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGAGGAGAGTTTTCAGCTaGCTGTTCCAGACTATGGAG +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQRRVFS*LFQTME
Trigger: CTCCATAGTCTGGAACAGCCAGCTGAAAACTCTCCT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422815.5
ENST00000483391.5
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGACTCCATTCACGCAGTaGCAGAAGGCATTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQTPFTQ*QKAFLL
Trigger: TAACAGAAATGCCTTCTGGCACTGCGTGAATGGAGT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR GCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGCTGGCTGTTCCGAGCTaGAAATTCAGTATAAGGACA +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQLAVPS*KFSIRT
Trigger: TGTCCTTATACTGAATTTGCAGCTCGGAACAGCCAG...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352594.10
ENST00000430615.1
ENST00000451398.6
CDS-3UTR CCA 90 bp GTGCTTAAGCCATTGAGCCTTAATATCGAAGCTCTTGATGTTGTCATAGCCAACAGGAGAGTTTTCAGCTaGCTGTTCCGAGCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: VLKPLSLNIEALDVVIANRRVFS*LFRAAN
Trigger: ATTTGCAGCTCGGAACAGCCAGCTGAAAACTCTCCT...GTTGGCTATGACAACATCAAGAGCTTCGATATTAAGGCTCAATGGCTTAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CCA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCTAAGCAAAAGAGACTaGAACTCTAGGGAATATAGA +
Preference number: 4 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGLSKRD*NSREYR
Trigger: TCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAG...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CCA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGCTAAGCAAAAGAGACTaGAACTCTAGGGAATATAGA +
Preference number: 4 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQLSKRD*NSREYR
Trigger: TCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAG...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp CAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGGTACGTGCTGGAGCCGTGCAACTaGCACTCTGCAGGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: QSQLVSKTSPAWQFCWYVLEPCN*HSAGRG
Trigger: CCCTCGGCCTGCAGAGTGCAAGTTGCACGGCTCCAG...CACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CAA 90 bp CTTGGCATAGGGCCCAGCAGGACCAGCACCAGAGGTGGGGGCACCAATTCCAGTCAGGTTTATGCCCAGTaGCAGCAATCACAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LGIGPSRTSTRGGGTNSSQVYAQ*QQSQLV
Trigger: CACCAGCTGTGATTGCTGCAACTGGGCATAAACCTG...ACTGGAATTGGTGCCCCCACCTCTGGTGCTGGTCCTGCTGGGCCCTATGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS CCA 90 bp CTTCAGACTATGGAGGATTCACCACCAGACTGGAAAGCAACAGCCTaGGCTCCAGAGTCGGCCACCTGTTCGTGCACAGACGAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: LQTMEDSPPDWKATA*APESATCSCTDEEV
Trigger: AACCTCCTCGTCTGTGCACGAACAGGTGGCCGACTCTGGAGCCCAGGCTGTTGCTTTCCAGTCTGGTGGTGAATCCTCCATAGTCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369740.6
CDS CCA 90 bp TTCCAGACTATGGAGGATTCACCACCAGACTGGAAAGCAACAGCCTaGGCTCCAGAGTCGGCCACCTGTTCGTGCACAGACGAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: FQTMEDSPPDWKATA*APESATCSCTDEEV
Trigger: AACCTCCTCGTCTGTGCACGAACAGGTGGCCGACTCTGGAGCCCAGGCTGTTGCTTTCCAGTCTGGTGGTGAATCCTCCATAGTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422815.5
ENST00000483391.5
CDS-3UTR CAA 90 bp GTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGGTACGTGACTCCATTCACGCAGAGATTAGGGGAAACTaGCCCTGGTTGCAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: VEDKPGLAVLLVRDSIHAEIRGN*PWLQKV
Trigger: CACTTTCTGCAACCAGGGCAAGTTTCCCCTAATCTC...TGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CAA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCTGGAGCCGTGCAACTaGCACTCTGCAGGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGLEPCN*HSAGRG
Trigger: CCCTCGGCCTGCAGAGTGCAAGTTGCACGGCTCCAG...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp GCCTGGCAGTTCTGCTGGTACGTGACTCCATTCACGCAGTGCCAGAAGGCATTTAGGCATTTCTGTTATTaGCCACGGGGTAGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: AWQFCWYVTPFTQCQKAFRHFCY*PRGRGR
Trigger: ACGGCCTCTACCCCGTGGCAAATAACAGAAATGCCT...AAATGCCTTCTGGCACTGCGTGAATGGAGTCACGTACCAGCAGAACTGCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CAA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGCTGGAGCCGTGCAACTaGCACTCTGCAGGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQLEPCN*HSAGRG
Trigger: CCCTCGGCCTGCAGAGTGCAAGTTGCACGGCTCCAG...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp CACTGGGAGCAGCAGTTATTGGCTCAATGGGCTGAGCTGGAGCCGTGCAACTTGGTGATCTTGGGCAAGTaGCTTAAATCCTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: HWEQQLLAQWAELEPCNLVILGK*LKSSLY
Trigger: GTACAGAGAGGATTTAAGCAACTTGCCCAAGATCAC...CAAGTTGCACGGCTCCAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CAA 90 bp GCAATCACAGCTGGTGTCGAAGACAAGCCCGGCCTGGCAGTTCTGCTGGTACGTACTAGTTGTGTGATCTaGGGCAAGTTGCTTAAATCC +
Preference number: 5 (lower is better)
Translates to: AITAGVEDKPGLAVLLVRTSCVI*GKLLKS
Trigger: GGATTTAAGCAACTTGCCCAAGATCACACAACTAGT...ACGTACCAGCAGAACTGCCAGGCCGGGCTTGTCTTCGACACCAGCTGTGATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CAA 90 bp CCCACACATTGCCCTGATAGGCATAAGGCACTTCCTGAGGGGCATCCCATCCCTGTTGTGCTTAAGCCATaGAGCCTTAATATCGAAGCT +
Preference number: 5 (lower is better)
Translates to: PTHCPDRHKALPEGHPIPVVLKP*SLNIEA
Trigger: AGCTTCGATATTAAGGCTCAATGGCTTAAGCACAAC...AGGGATGGGATGCCCCTCAGGAAGTGCCTTATGCCTATCAGGGCAATGTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CAA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTTGGGAGCAGCAGTTATaGGCTCAATGGGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGWEQQL*AQWAEL
Trigger: CAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCA...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCCAGTGTTGGAGGGGTaGCTCAGGATGAAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGPVLEG*LRMKLC
Trigger: ACACAACTTCATCCTGAGCAACCCCTCCAACACTGG...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGTGGGAGCAGCAGTTATaGGCTCAATGGGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQWEQQL*AQWAEL
Trigger: CAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCA...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTAGGCATTTCTGTTATTaGCCACGGGGTAGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGRHFCY*PRGRGR
Trigger: ACGGCCTCTACCCCGTGGCAAATAACAGAAATGCCT...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGGTTTATGCCCAGTaGCAGCAATCACAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGQVYAQ*QQSQLV
Trigger: CACCAGCTGTGATTGCTGCAACTGGGCATAAACCTG...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp AAGCCATTGAGCCTTAATATCGAAGCTCTTGATGTTGTCATAGCCAACCCACACCCAGTGTTGGAGGGGTaGCTCAGGATGAAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: KPLSLNIEALDVVIANPHPVLEG*LRMKLC
Trigger: ACACAACTTCATCCTGAGCAACCCCTCCAACACTGG...GTGTGGGTTGGCTATGACAACATCAAGAGCTTCGATATTAAGGCTCAATGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CAA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGCCAGTGTTGGAGGGGTaGCTCAGGATGAAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQPVLEG*LRMKLC
Trigger: ACACAACTTCATCCTGAGCAACCCCTCCAACACTGG...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTGAGATTAGGGGAAACTaGCCCTGGTTGCAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGEIRGN*PWLQKV
Trigger: CACTTTCTGCAACCAGGGCAAGTTTCCCCTAATCTC...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp GTGCTTAAGCCATTGAGCCTTAATATCGAAGCTCTTGATGTTGTCATAGCCAACTGGGAGCAGCAGTTATaGGCTCAATGGGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: VLKPLSLNIEALDVVIANWEQQL*AQWAEL
Trigger: CAGCTCAGCCCATTGAGCCAATAACTGCTGCTCCCA...GTTGGCTATGACAACATCAAGAGCTTCGATATTAAGGCTCAATGGCTTAAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352594.10
CDS-3UTR CAA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGAGGCATTTCTGTTATTaGCCACGGGGTAGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQRHFCY*PRGRGR
Trigger: ACGGCCTCTACCCCGTGGCAAATAACAGAAATGCCT...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGCAGGTTTATGCCCAGTaGCAGCAATCACAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQQVYAQ*QQSQLV
Trigger: CACCAGCTGTGATTGCTGCAACTGGGCATAAACCTG...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS-3UTR CAA 90 bp CAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTCAGGAGATTAGGGGAAACTaGCCCTGGTTGCAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: QHVLSKRDWNSREYRPGQEIRGN*PWLQKV
Trigger: CACTTTCTGCAACCAGGGCAAGTTTCCCCTAATCTC...CTGACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS TCA 90 bp CATGGTTGCAGTCAGCACCAGTCCCGCAGAGCTTTTTATATGTTCTaGTTCTGTGGTTATCACAAAGGCTTCAGACTATGGAGGATTCAC +
Preference number: 5 (lower is better)
Translates to: HGCSQHQSRRAFYMF*FCGYHKGFRLWRIH
Trigger: GTGAATCCTCCATAGTCTGAAGCCTTTGTGATAACCACAGAATCAGAACATATAAAAAGCTCTGCGGGACTGGTGCTGACTGCAACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369740.6
CDS-3UTR CAA 90 bp GGGCAACATGTCCTAAGCAAAAGAGACTGGAACTCTAGGGAATATAGACCAGGTGTTGTGCTTAAGCCATaGAGCCTTAATATCGAAGCT +
Preference number: 5 (lower is better)
Translates to: GQHVLSKRDWNSREYRPGVVLKP*SLNIEA
Trigger: AGCTTCGATATTAAGGCTCAATGGCTTAAGCACAAC...ACCTGGTCTATATTCCCTAGAGTTCCAGTCTCTTTTGCTTAGGACATGTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343320.10
ENST00000352594.10
ENST00000369740.6
ENST00000422815.5
ENST00000430615.1
ENST00000451398.6
ENST00000483391.5
CDS GCA 90 bp GTTAGAGCCTTTGTTGGGGCCCTGATCATTTCTTGCTTGATTTACTaGAATAACCTCCTAATTCTATCCATGACTTCTCATCTCCTTCTA +
Preference number: 5 (lower is better)
Translates to: VRAFVGALIISCLIY*NNLLILSMTSHLLL
Trigger: TAGAAGGAGATGAGAAGTCATGGATAGAATTAGGAGGTTATTGCAGTAAATCAAGCAAGAAATGATCAGGGCCCCAACAAAGGCTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS TCA 90 bp AAGTTCTTCAAAGCCAAGGATAGTGTCTTATTCTTATATTTAGCCTaGCAATGTCTGCCACAGAATATGTACTCAGTAATAACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: KFFKAKDSVLFLYLA*QCLPQNMYSVITGS
Trigger: GCTGCCCGTTATTACTGAGTACATATTCTGTGGCAGACATTGTCAGGCTAAATATAAGAATAAGACACTATCCTTGGCTTTGAAGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS CCA 90 bp ACACTTATCTGTATATCATTTGTGCCATTCCCATCCTCACTTAATTaGTTAACACCAGTTTCTTTCAAGACTGAGCCCAAGCATCACTTT +
Preference number: 5 (lower is better)
Translates to: TLICISFVPFPSSLN*LTPVSFKTEPKHHF
Trigger: AAAGTGATGCTTGGGCTCAGTCTTGAAAGAAACTGGTGTTAACCAATTAAGTGAGGATGGGAATGGCACAAATGATATACAGATAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS TCA 90 bp TTCCTATTTCCAGTTGATCTCCAAATCCTATTGATTCTATCCTCTTaGTATCTCTTATATACATCCTCTTCTTCCCTCAGTGTTAGAGCC +
Preference number: 5 (lower is better)
Translates to: FLFPVDLQILLILSS*YLLYTSSSSLSVRA
Trigger: GGCTCTAACACTGAGGGAAGAAGAGGATGTATATAAGAGATATCAAGAGGATAGAATCAATAGGATTTGGAGATCAACTGGAAATAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS GCA 90 bp ATTCCTGAACATAATATAAAAGTTCTCACATTATCTGGTTCTTCATaGAACTTCACAGCCATTATCACCCACTTGCTCACACTTATCTGT +
Preference number: 5 (lower is better)
Translates to: IPEHNIKVLTLSGSS*NFTAIITHLLTLIC
Trigger: ACAGATAAGTGTGAGCAAGTGGGTGATAATGGCTGTGAAGTTGCATGAAGAACCAGATAATGTGAGAACTTTTATATTATGTTCAGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS CCA 72 bp ATGGAGGATTCACCACCAGACTGGAAAGCAACAGCCTaGGCTCCAGAGTCGGCCACCTGTTCGTGCACAGAC +
Preference number: 6 (lower is better)
Translates to: MEDSPPDWKATA*APESATCSCTD
Trigger: GTCTGTGCACGAACAGGTGGCCGACTCTGGAGCCCAGGCTGTTGCTTTCCAGTCTGGTGGTGAATCCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369740.6
ENST00000422815.5
ENST00000483391.5
CDS CCA 72 bp TGGCCAGGAGAGTTTTCAGCTGGCTGTTCCAGACTATaGAGGATTCACCACCAGACTGGAAAGCAACAGCCT +
Preference number: 6 (lower is better)
Translates to: WPGEFSAGCSRL*RIHHQTGKQQP
Trigger: AGGCTGTTGCTTTCCAGTCTGGTGGTGAATCCTCCATAGTCTGGAACAGCCAGCTGAAAACTCTCCTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422815.5
ENST00000483391.5
CDS TCA 72 bp TCACCAAAGTCCCACACTGAGTTAGTAGGTAGGTCATaGCCAAAACCCAGGTCCCAGATGACCATCAGGGCT +
Preference number: 6 (lower is better)
Translates to: SPKSHTELVGRS*PKPRSQMTIRA
Trigger: AGCCCTGATGGTCATCTGGGACCTGGGTTTTGGTCATGACCTACCTACTAACTCAGTGTGGGACTTTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS CCA 72 bp AACTCTGCTCTTTCTCCCAAGTTGCCCTTGTTTCTTTaGATACCTGGCAAACCCAGCACACTGTGTTCCCTC +
Preference number: 6 (lower is better)
Translates to: NSALSPKLPLFL*IPGKPSTLCSL
Trigger: GAGGGAACACAGTGTGCTGGGTTTGCCAGGTATCCAAAGAAACAAGGGCAACTTGGGAGAAAGAGCAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS CCA 72 bp CCAATTCTCCTCGGAAAGAAAGACTTTGAATCTTTTTaGGCTAAAGACTGGGACTTCCTTCCCCACCTGCAC +
Preference number: 6 (lower is better)
Translates to: PILLGKKDFESF*AKDWDFLPHLH
Trigger: GTGCAGGTGGGGAAGGAAGTCCCAGTCTTTAGCCCAAAAAGATTCAAAGTCTTTCTTTCCGAGGAGAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS CAA 72 bp CCTAGAGCCACCCAATTCTCCTCGGAAAGAAAGACTTaGAATCTTTTTGGGCTAAAGACTGGGACTTCCTTC +
Preference number: 6 (lower is better)
Translates to: PRATQFSSERKT*NLFGLKTGTSF
Trigger: GAAGGAAGTCCCAGTCTTTAGCCCAAAAAGATTCAAAGTCTTTCTTTCCGAGGAGAATTGGGTGGCTCTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS GCA 72 bp AATGAGTTATGGTTCTTAAAACAACATGTAGAGCAGTaGCTGGCACAGAGCTCACATGTTGCTTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: NELWFLKQHVEQ*LAQSSHVALLL
Trigger: CAACAACAAAGCAACATGTGAGCTCTGTGCCAGGCACTGCTCTACATGTTGTTTTAAGAACCATAACTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS CAA 72 bp GGTTCTTCATGCAACTTCACAGCCATTATCACCCACTaGCTCACACTTATCTGTATATCATTTGTGCCATTC +
Preference number: 6 (lower is better)
Translates to: GSSCNFTAIITH*LTLICISFVPF
Trigger: GAATGGCACAAATGATATACAGATAAGTGTGAGCAAGTGGGTGATAATGGCTGTGAAGTTGCATGAAGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS CAA 90 bp ACATTATCTGGTTCTTCATGCAACTTCACAGCCATTATCACCCACTaGCTCACACTTATCTGTATATCATTTGTGCCATTCCCATCCTCA +
Preference number: 6 (lower is better)
Translates to: TLSGSSCNFTAIITH*LTLICISFVPFPSS
Trigger: TGAGGATGGGAATGGCACAAATGATATACAGATAAGTGTGAGCAAGTGGGTGATAATGGCTGTGAAGTTGCATGAAGAACCAGATAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS GCA 72 bp TTTGTTGGGGCCCTGATCATTTCTTGCTTGATTTACTaGAATAACCTCCTAATTCTATCCATGACTTCTCAT +
Preference number: 6 (lower is better)
Translates to: FVGALIISCLIY*NNLLILSMTSH
Trigger: ATGAGAAGTCATGGATAGAATTAGGAGGTTATTGCAGTAAATCAAGCAAGAAATGATCAGGGCCCCAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS CAA 90 bp GAAGCTCTAGTTGCAGTGATACCCTACATCCAGCAGTATAGAAATTaGTTTCATAAAGTAGATGAACTACTTTATAGGACTGACATCCCA +
Preference number: 6 (lower is better)
Translates to: EALVAVIPYIQQYRN*FHKVDELLYRTDIP
Trigger: TGGGATGTCAGTCCTATAAAGTAGTTCATCTACTTTATGAAACAAATTTCTATACTGCTGGATGTAGGGTATCACTGCAACTAGAGCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS CAA 90 bp TTAGTTAATAGCATTAAAATCAAACCCATCCTCAAAGTCAGAAAATaGGAGGTCCTCTCCATTTCCTATTTCCAGTTGATCTCCAAATCC +
Preference number: 6 (lower is better)
Translates to: LVNSIKIKPILKVRK*EVLSISYFQLISKS
Trigger: GGATTTGGAGATCAACTGGAAATAGGAAATGGAGAGGACCTCCAATTTTCTGACTTTGAGGATGGGTTTGATTTTAATGCTATTAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS CCA 72 bp TTCACCTATTACTTAACATTGAAACTATTCAGAGGCTaGGTGACGATCTGTTACATAGAATGGAATAGCAAA +
Preference number: 6 (lower is better)
Translates to: FTYYLTLKLFRG*VTICYIEWNSK
Trigger: TTTGCTATTCCATTCTATGTAACAGATCGTCACCCAGCCTCTGAATAGTTTCAATGTTAAGTAATAGGTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS CAA 72 bp GAGCTCACATGTTGCTTTGTTGTTGCCATTAAATGTTaGTTTAATGAACGCACGATATATAAGACTCTTTGC +
Preference number: 6 (lower is better)
Translates to: ELTCCFVVAIKC*FNERTIYKTLC
Trigger: GCAAAGAGTCTTATATATCGTGCGTTCATTAAACAAACATTTAATGGCAACAACAAAGCAACATGTGAGCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477918.6
CDS TCA 72 bp AAAGCCAAGGATAGTGTCTTATTCTTATATTTAGCCTaGCAATGTCTGCCACAGAATATGTACTCAGTAATA +
Preference number: 6 (lower is better)
Translates to: KAKDSVLFLYLA*QCLPQNMYSVI
Trigger: TATTACTGAGTACATATTCTGTGGCAGACATTGTCAGGCTAAATATAAGAATAAGACACTATCCTTGGCTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477918.6