RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHGA (Homo sapiens)

Ensembl gene IDs: ENSG00000100604, ENSG00000276781

Ensembl transcript IDs: ENST00000216492.10, ENST00000334654.4, ENST00000553866.1, ENST00000556076.5, ENST00000556098.1, ENST00000556876.1, ENST00000613166.3, ENST00000627311.2, ENST00000627696.1, ENST00000629687.1, ENST00000630996.1, ENST00000631274.1

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAAGGCGCGTAGGGGGCGATAGGGTGGCCTGGGCTTGGGCAGGCTaGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCC +
Preference number: 1 (lower is better)
Translates to: TRRVGGDRVAWAWAG*RLPPYRKQHPGHLA
Trigger: GGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCCACCCTATCGCCCCCTACGCGCCTTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR CCA 90 bp TTGTTCCCCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTaGGGCCTGGCTCCGTCTGTGGCTTCACCACTTTTCTCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: LFPSALDSCMGSGRA*GLAPSVASPLFSAS
Trigger: GGAGGCAGAGAAAAGTGGTGAAGCCACAGACGGAGCCAGGCCCCAGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR CCA 90 bp CCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTGGGGCCTaGCTCCGTCTGTGGCTTCACCACTTTTCTCTGCCTCCTTGGAAT +
Preference number: 1 (lower is better)
Translates to: PQPWTPAWAPGGPGA*LRLWLHHFSLPPWN
Trigger: ATTCCAAGGAGGCAGAGAAAAGTGGTGAAGCCACAGACGGAGCCAGGCCCCAGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR GCA 90 bp CTCCTCCTCCTCCTCCTCTTCTCTCTTTGCCTGCCACCCTGGCTCTaGACTCAGGCCCTTCTCTCTGTCCACCAGACCCTGAGAGAGGCC +
Preference number: 1 (lower is better)
Translates to: LLLLLLFSLCLPPWL*TQALLSVHQTLREA
Trigger: GGCCTCTCTCAGGGTCTGGTGGACAGAGAGAAGGGCCTGAGTGCAGAGCCAGGGTGGCAGGCAAAGAGAGAAGAGGAGGAGGAGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR CCA 90 bp CTCCTCCTCCTCCTCCTCCTCCTCTTCTCTCTTTGCCTGCCACCCTaGCTCTGCACTCAGGCCCTTCTCTCTGTCCACCAGACCCTGAGA +
Preference number: 1 (lower is better)
Translates to: LLLLLLLLFSLCLPP*LCTQALLSVHQTLR
Trigger: TCTCAGGGTCTGGTGGACAGAGAGAAGGGCCTGAGTGCAGAGCCAGGGTGGCAGGCAAAGAGAGAAGAGGAGGAGGAGGAGGAGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR CCA 90 bp GATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTGGCTGCTCTaGTTCTCAAGAACCTCTGAGAGTTCATCTTCAAAACCGCTGTGT +
Preference number: 1 (lower is better)
Translates to: DDGSSTASFSSAWLL*FSRTSESSSSKPLC
Trigger: ACACAGCGGTTTTGAAGATGAACTCTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR GCA 90 bp GCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTaGCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTAGG +
Preference number: 1 (lower is better)
Translates to: ACVQRRNRQCLKLWG*PAKDVPGQVGVRSR
Trigger: CCTACTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR CCA 90 bp AAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTaGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGG +
Preference number: 1 (lower is better)
Translates to: KAACVQRRNRQCLKL*GCPAKDVPGQVGVR
Trigger: CCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR CCA 90 bp TCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCCTCGGCCTGTGGGCCTaGGTATTTCTGGCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: SSGTASSPASASSSSSSSLGLWA*VFLAGE
Trigger: CTCCCCAGCCAGAAATACCCAGGCCCACAGGCCGAG...GGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR TCA 90 bp TTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTGTCCACCAGACCCTaGGAGAGGCCCTCACTGTCC +
Preference number: 2 (lower is better)
Translates to: FLGDSLLSSLSLLLLLLLLSTRP*ERPSLS
Trigger: GGACAGTGAGGGCCTCTCTCAGGGTCTGGTGGACAG...GAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCCTCTCCTTGGCGCCTTaGAGAGCGAGGTCTTGGAGC +
Preference number: 2 (lower is better)
Translates to: GPSSSGTASSPASASSSSLSLAP*RARSWS
Trigger: GCTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAG...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp TCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCGATGTGCCCTCTCCTTaGCGCCTTGGAGAGCGAGGT +
Preference number: 2 (lower is better)
Translates to: SSGTASSPASASSSSSSSDVPSP*RLGERG
Trigger: ACCTCGCTCTCCAAGGCGCCAAGGAGAGGGCACATC...GGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp GCTGGAGGGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGGATGTGCCCTCTCCTTaGCGCCTTGGAGAGCGAGGT +
Preference number: 2 (lower is better)
Translates to: AGGWVLVASSSSSSSSPGDVPSP*RLGERG
Trigger: ACCTCGCTCTCCAAGGCGCCAAGGAGAGGGCACATC...CCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACCCTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp GGGCCTGATTGTTCCCCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTCTCTCCTTGGCGCCTTaGAGAGCGAGGTCTTGGAGC +
Preference number: 2 (lower is better)
Translates to: GPDCSPQPWTPAWAPGGPLSLAP*RARSWS
Trigger: GCTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAG...AGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACAATCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR TCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCCTGTGTTTCTTCTGCTaGTGTGCCCTCTCCTTGGCG +
Preference number: 2 (lower is better)
Translates to: GPSSSGTASSPASASSSSLCFFC*CALSLA
Trigger: CGCCAAGGAGAGGGCACATCAGCAGAAGAAACACAG...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCGCCTGGCTCCGTCTGTaGCTTCACCACTTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: GPSSSGTASSPASASSSSAWLRL*LHHFSL
Trigger: CAGAGAAAAGTGGTGAAGCCACAGACGGAGCCAGGC...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR CAA 90 bp CTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTCTTCTCTCTTaGCCTGCCACCCTGGCTCTGCACTCAGGCCCTTCTCTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: LQPQPPPPPPPPLLS*PATLALHSGPSLCP
Trigger: TGGACAGAGAGAAGGGCCTGAGTGCAGAGCCAGGGTGGCAGGCAAAGAGAGAAGAGGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR TCA 90 bp GGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGGCCTGATCTGTGTTTCTTCTGCTaGTGTGCCCTCTCCTTGGCG +
Preference number: 2 (lower is better)
Translates to: GGCWWPPPPPPLPPQGPDLCFFC*CALSLA
Trigger: CGCCAAGGAGAGGGCACATCAGCAGAAGAAACACAG...ATCAGGCCCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR TCA 90 bp CCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTCATAACATCCTTGGATaGTGGCTCTTCCACCGCCTC +
Preference number: 2 (lower is better)
Translates to: PRGQPPLQPQPPPPPPPPHNILG*WLFHRL
Trigger: GAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATG...AGGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR GCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTTTCTTCTGCTGATGTaGCCTCTCCTTGGCGCCTTG +
Preference number: 2 (lower is better)
Translates to: GPSSSGTASSPASASSSSFLLLM*PLLGAL
Trigger: CAAGGCGCCAAGGAGAGGGCACATCAGCAGAAGAAA...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR GCA 90 bp CCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTTTTCTTCTGCTGATGTaGCCTCTCCTTGGCGCCTTG +
Preference number: 2 (lower is better)
Translates to: PRGQPPLQPQPPPPPPPPFLLLM*PLLGAL
Trigger: CAAGGCGCCAAGGAGAGGGCACATCAGCAGAAGAAA...AGGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp AAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGGGCGATAGGGTGGCCTaGGCTTGGGCAGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: KVVGLPCKGCSRAGRSQEGDRVA*AWAGWR
Trigger: CCTCCAGCCTGCCCAAGCCCAGGCCACCCTATCGCC...CTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR CCA 90 bp TTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCTCGGCCTGGCTGCTCTaGTTCTCAAGAACCTCTGAG +
Preference number: 2 (lower is better)
Translates to: FLGDSLLSSLSLLLLLLLSAWLL*FSRTSE
Trigger: CTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGA...GAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp TCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTCTTTCAGCTCGGCCTaGCTGCTCTGGTTCTCAAGA +
Preference number: 2 (lower is better)
Translates to: SSGTASSPASASSSSSSSSFSSA*LLWFSR
Trigger: TCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGA...GGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp GGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGGCCTGATGCCTGGCTCCGTCTGTaGCTTCACCACTTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: GGCWWPPPPPPLPPQGPDAWLRL*LHHFSL
Trigger: CAGAGAAAAGTGGTGAAGCCACAGACGGAGCCAGGC...ATCAGGCCCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp GGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGGCCTGATTCTTTCAGCTCGGCCTaGCTGCTCTGGTTCTCAAGA +
Preference number: 2 (lower is better)
Translates to: GGCWWPPPPPPLPPQGPDSFSSA*LLWFSR
Trigger: TCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGA...ATCAGGCCCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR GCA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGGGCAGGCTGGAGGCTaGCTCCCTACCGGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGGQAGG*LPTGSS
Trigger: GCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCC...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR GCA 90 bp GCTGGAGGGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGTTCACCACTTTTCTCTaGCTCCTTGGAATCCTCTCT +
Preference number: 2 (lower is better)
Translates to: AGGWVLVASSSSSSSSPGFTTFL*LLGILS
Trigger: AGAGAGGATTCCAAGGAGGCAGAGAAAAGTGGTGAA...CCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACCCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR TCA 90 bp GCTGGAGGGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGGTTCTCAAGAACCTCTaGGAGTTCATCTTCAAAACC +
Preference number: 2 (lower is better)
Translates to: AGGWVLVASSSSSSSSPGVLKNL*EFIFKT
Trigger: GGTTTTGAAGATGAACTCTCAGAGGTTCTTGAGAAC...CCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACCCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR TCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCGTTCTCAAGAACCTCTaGGAGTTCATCTTCAAAACC +
Preference number: 2 (lower is better)
Translates to: GPSSSGTASSPASASSSSVLKNL*EFIFKT
Trigger: GGTTTTGAAGATGAACTCTCAGAGGTTCTTGAGAAC...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR GCA 90 bp TTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCTTCACCACTTTTCTCTaGCTCCTTGGAATCCTCTCT +
Preference number: 2 (lower is better)
Translates to: FLGDSLLSSLSLLLLLLLFTTFL*LLGILS
Trigger: AGAGAGGATTCCAAGGAGGCAGAGAAAAGTGGTGAA...GAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp TCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTTTTCTCTGCCTCCTTaGAATCCTCTCTTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: SSGTASSPASASSSSSSSFSLPP*NPLFSP
Trigger: TGGAGAAAAGAGAGGATTCCAAGGAGGCAGAGAAAA...GGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTTTTCTCTGCCTCCTTaGAATCCTCTCTTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: GPSSSGTASSPASASSSSFSLPP*NPLFSP
Trigger: TGGAGAAAAGAGAGGATTCCAAGGAGGCAGAGAAAA...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTGGCGATAGGGTGGCCTaGGCTTGGGCAGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCGDRVA*AWAGWR
Trigger: CCTCCAGCCTGCCCAAGCCCAGGCCACCCTATCGCC...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR GCA 90 bp CACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGAAGCATCTGGCCAGGACCTaGCAAGGGGACAGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: HQKVRSYCSCAQWIGWRKHLART*QGDSRA
Trigger: GGCTCTGCTGTCCCCTTGGCAGGTCCTGGCCAGATG...CTTCCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR CCA 90 bp ACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTGGCTGCTCTGGAGAGCGAGGTCTTaGAGCTCCTTCAGTAAATTC +
Preference number: 2 (lower is better)
Translates to: TSLDDGSSTASFSSAWLLWRARS*SSFSKF
Trigger: GAATTTACTGAAGGAGCTCCAAGACCTCGCTCTCCA...GAGCAGCCAGGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR GCA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGCATCTGGCCAGGACCTaGCAAGGGGACAGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRHLART*QGDSRA
Trigger: GGCTCTGCTGTCCCCTTGGCAGGTCCTGGCCAGATG...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR GCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCATCTGGCCAGGACCTaGCAAGGGGACAGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLHLART*QGDSRA
Trigger: GGCTCTGCTGTCCCCTTGGCAGGTCCTGGCCAGATG...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR GCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAGGGCAGGCTGGAGGCTaGCTCCCTACCGGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRGQAGG*LPTGSS
Trigger: GCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCC...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR CCA 90 bp TTAGATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAGGCGATAGGGTGGCCTaGGCTTGGGCAGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: LDKVHTEYVTVRSSQLSPGDRVA*AWAGWR
Trigger: CCTCCAGCCTGCCCAAGCCCAGGCCACCCTATCGCC...TGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
3UTR-3UTR GCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAGTTGTGGGGCTGCCCTaGAAAGGATGTTCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRVVGLP*KGCSRA
Trigger: TGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAAC...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR CCA 90 bp CACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGAAGCAATGTTTAAAGTTGTaGGGCTGCCCTGCAAAGGAT +
Preference number: 2 (lower is better)
Translates to: HQKVRSYCSCAQWIGWRKQCLKL*GCPAKD
Trigger: ATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG...CTTCCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR GCA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTTGTGGGGCTGCCCTaGAAAGGATGTTCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKVVGLP*KGCSRA
Trigger: TGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAAC...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR GCA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGAAACTTCTAGAAAGCTaGCTGTGTTCAGAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRKLLES*LCSEKE
Trigger: TTCCTTCTCTGAACACAGGCAGCTTTCTAGAAGTTT...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR GCA 90 bp TCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAATTAAAGTTGTGGGGCTaGCCTGCAAAGGATGTTCCA +
Preference number: 2 (lower is better)
Translates to: SYRICYSQEFSAFTKRSELKLWG*PAKDVP
Trigger: TGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAA...TTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR GCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTTTAAAGTTGTGGGGCTaGCCTGCAAAGGATGTTCCA +
Preference number: 2 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGLKLWG*PAKDVP
Trigger: TGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAA...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR GCA 90 bp TTAGATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAGTTATTGCAGTTGTaGCCAGTGGATAGGATGGAG +
Preference number: 2 (lower is better)
Translates to: LDKVHTEYVTVRSSQLSPKLLQL*PVDRME
Trigger: CTCCATCCTATCCACTGGGCACAACTGCAATAACTT...TGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
3UTR-3UTR GCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTAAACTTCTAGAAAGCTaGCTGTGTTCAGAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGKLLES*LCSEKE
Trigger: TTCCTTCTCTGAACACAGGCAGCTTTCTAGAAGTTT...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR CAA 90 bp TTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCGCTGGAGGGTGGGTGTaGGTGGCCTCCTCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: FLGDSLLSSLSLLLLLLLAGGWV*VASSSS
Trigger: GGAGGAGGAGGAGGCCACCAACACCCACCCTCCAGC...GAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CAA 90 bp TTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCCTCTCCTTGGCGCCTaGGAGAGCGAGGTCTTGGAG +
Preference number: 3 (lower is better)
Translates to: FLGDSLLSSLSLLLLLLLPLLGA*ESEVLE
Trigger: CTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAGG...GAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR CCA 72 bp TGTAGCCAAGGCTCGGGTGGGGGTTCAGCACTACAGTaGGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: CSQGSGGGSALQ*GLLPRGQPPLQ
Trigger: CTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCCCACTGTAGTGCTGAACCCCCACCCGAGCCTTGGCTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CAA 90 bp TTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCTTCTCCATAACATCCTaGGATGATGGCTCTTCCACC +
Preference number: 3 (lower is better)
Translates to: FLGDSLLSSLSLLLLLLLFSITS*DDGSST
Trigger: GGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA...GAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR-3UTR CAA 90 bp TCTTTCAGCTCGGCCTGGCTGCTCTGGTTCTCAAGAACCTCTGAGAGTTCATCTCCTCTCCTTGGCGCCTaGGAGAGCGAGGTCTTGGAG +
Preference number: 3 (lower is better)
Translates to: SFSSAWLLWFSRTSESSSPLLGA*ESEVLE
Trigger: CTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAGG...AGATGAACTCTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR CCA 72 bp GATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTaGCTGCTCTGGTTCTCAAGAACCTCTGAGAGTTCA +
Preference number: 3 (lower is better)
Translates to: DDGSSTASFSSA*LLWFSRTSESS
Trigger: TGAACTCTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR GCA 72 bp ATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTGGCTaGTCTGGTTCTCAAGAACCTCTGAGAGTTCATCTT +
Preference number: 3 (lower is better)
Translates to: MALPPPLSARPG*SGSQEPLRVHL
Trigger: AAGATGAACTCTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGAGGCGGTGGAAGAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR GCA 72 bp TTCATCTTCAAAACCGCTGTGTTTCTTCTGCTGATGTaGCCTCTCCTTGGCGCCTTGGAGAGCGAGGTCTTG +
Preference number: 3 (lower is better)
Translates to: FIFKTAVFLLLM*PLLGALESEVL
Trigger: CAAGACCTCGCTCTCCAAGGCGCCAAGGAGAGGGCACATCAGCAGAAGAAACACAGCGGTTTTGAAGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
3UTR GCA 72 bp AAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTaGAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAG +
Preference number: 3 (lower is better)
Translates to: KESSMFKVVGLP*KGCSRAGRSQE
Trigger: CTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR GCA 72 bp CAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTaGCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTC +
Preference number: 3 (lower is better)
Translates to: QRRNRQCLKLWG*PAKDVPGQVGV
Trigger: GACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR CCA 72 bp TGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTaGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTA +
Preference number: 3 (lower is better)
Translates to: CVQRRNRQCLKL*GCPAKDVPGQV
Trigger: TACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
3UTR-3UTR CAA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTTATTGCAGTaGTGCCCAGTGGATAGGATG +
Preference number: 3 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGQKLLQ*CPVDRM
Trigger: CATCCTATCCACTGGGCACAACTGCAATAACTTCTG...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGGGGCTGGGGGCGCAGTaGCTCGGCGTGCGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGGLGAQ*LGVRPS
Trigger: AGACGGACGCACGCCGAGGCACTGCGCCCCCAGCCC...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGTCCCGCAAGCTCCCCTaGACGGGGCTCGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGSRKLP*TGLEHC
Trigger: GCAGTGCTCGAGCCCCGTGCAGGGGAGCTTGCGGGA...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp GGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGGCCTGATGGGCTGGGGGCGCAGTaGCTCGGCGTGCGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: GGCWWPPPPPPLPPQGPDGLGAQ*LGVRPS
Trigger: AGACGGACGCACGCCGAGGCACTGCGCCCCCAGCCC...ATCAGGCCCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGAGGCTGGCTGGAGGGTaGGTGTTGGTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGRLAGG*VLVASS
Trigger: GGAGGAGGCCACCAACACCCACCCTCCAGCCAGCCT...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp TTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCACGGGGCTCGAGCACTaGAGTGGCAGGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGRLEAASLPEAASGPSGTGLEH*SGRSGG
Trigger: GCCACCGCTCCTGCCACTGCAGTGCTCGAGCCCCGT...GCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp GCTGGAGGGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGTCCCGCAAGCTCCCCTaGACGGGGCTCGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: AGGWVLVASSSSSSSSPGSRKLP*TGLEHC
Trigger: GCAGTGCTCGAGCCCCGTGCAGGGGAGCTTGCGGGA...CCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACCCTCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp TTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCGAGCAGCTGGCGGTGTaGGGCCGGGCACCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: FLGDSLLSSLSLLLLLLLEQLAV*GRAPRH
Trigger: GTGCCTAGGTGCCCGGCCCCACACCGCCAGCTGCTC...GAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCCCTTGGACTCCTGCATaGGCTCCGGGAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPSSSGTASSPASASSSSPWTPA*APGGPG
Trigger: CCCAGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGG...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp CCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTCCTTGGACTCCTGCATaGGCTCCGGGAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRGQPPLQPQPPPPPPPPPWTPA*APGGPG
Trigger: CCCAGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGG...AGGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCTCGGCCTGTGGGCCTaGGTATTTCTGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGLGLWA*VFLAGE
Trigger: CTCCCCAGCCAGAAATACCCAGGCCCACAGGCCGAG...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp CCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTAGGCTGGCTGGAGGGTaGGTGTTGGTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PRGQPPLQPQPPPPPPPPRLAGG*VLVASS
Trigger: GGAGGAGGCCACCAACACCCACCCTCCAGCCAGCCT...AGGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGGACCGTCCCCCTCGGCCTGTaGGCCTGGGTATTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GWRLPPYRKQHPGHLARTVPLGL*AWVFLA
Trigger: AGCCAGAAATACCCAGGCCCACAGGCCGAGGGGGAC...GGTCCTGGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCGTAGTGCCTGCAGCTaGTGGGCCACTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGRSACS*WATFSS
Trigger: GCTGGAGAAAGTGGCCCACCAGCTGCAGGCACTACG...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GGGCCTGATTGTTCCCCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTCGCAGTGCCTCGGCGTaGGTCCGTCTGTCGGTCGAT +
Preference number: 4 (lower is better)
Translates to: GPDCSPQPWTPAWAPGGPRSASA*VRLSVD
Trigger: ATCGACCGACAGACGGACGCACGCCGAGGCACTGCG...AGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACAATCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR GCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGGTTGTGGGGCTGCCCTaGAAAGGATGTTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGVVGLP*KGCSRA
Trigger: TGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAAC...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGGCCTGATAGGCTGGCTGGAGGGTaGGTGTTGGTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGCWWPPPPPPLPPQGPDRLAGG*VLVASS
Trigger: GGAGGAGGCCACCAACACCCACCCTCCAGCCAGCCT...ATCAGGCCCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCCTCGGCCTGTGGGCCTaGGTATTTCTGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GPSSSGTASSPASASSSSLGLWA*VFLAGE
Trigger: CTCCCCAGCCAGAAATACCCAGGCCCACAGGCCGAG...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGAGCTCCTTGGCCAGCTaGTCCATCTTGCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGSSLAS*SILLQR
Trigger: ACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCT...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGGACCCAGCCGTCAGCTCCTTaGCCAGCTGGTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: GWRLPPYRKQHPGHLARTQPSAP*PAGPSC
Trigger: GCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTG...GGTCCTGGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGCTCCTGGTCCTCTaGTCTGCGGTTTGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGRLEAASLPEAASGPSGQLLVL*SAVCAA
Trigger: GGCAGCGCAAACCGCAGACCAGAGGACCAGGAGCTG...GCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCTGTGTTTCTTCTGCTaGTGTGCCCTCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGLCFFC*CALSLA
Trigger: CGCCAAGGAGAGGGCACATCAGCAGAAGAAACACAG...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp ACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTGGCTGCTCGGGCTGGGGGCGCAGTaGCTCGGCGTGCGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TSLDDGSSTASFSSAWLLGLGAQ*LGVRPS
Trigger: AGACGGACGCACGCCGAGGCACTGCGCCCCCAGCCC...GAGCAGCCAGGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR GCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGTCAGCTCGGCCTGGCTaGTCTGGTTCTCAAGAACCT +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGSARPG*SGSQEP
Trigger: AGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGA...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCCTCTCCTTGGCGCCTTaGAGAGCGAGGTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SSGTASSPASASSSSSSSLSLAP*RARSWS
Trigger: GCTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAG...GGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp CCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTGATGTGCCCTCTCCTTaGCGCCTTGGAGAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: PRGQPPLQPQPPPPPPPPDVPSP*RLGERG
Trigger: ACCTCGCTCTCCAAGGCGCCAAGGAGAGGGCACATC...AGGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGGCCTGATCTCGGCCTGTGGGCCTaGGTATTTCTGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GGCWWPPPPPPLPPQGPDLGLWA*VFLAGE
Trigger: CTCCCCAGCCAGAAATACCCAGGCCCACAGGCCGAG...ATCAGGCCCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGGCCTGATGTCCCCCTCGGCCTGTaGGCCTGGGTATTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GGCWWPPPPPPLPPQGPDVPLGL*AWVFLA
Trigger: AGCCAGAAATACCCAGGCCCACAGGCCGAGGGGGAC...ATCAGGCCCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR GCA 90 bp AAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGGGGCTGGGGGCGCAGTaGCTCGGCGTGCGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: KVVGLPCKGCSRAGRSQEGLGAQ*LGVRPS
Trigger: AGACGGACGCACGCCGAGGCACTGCGCCCCCAGCCC...CTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGTCTTTCTGCTGGGAGTaGTCCTGTTCTCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGSFCWE*SCSPFP
Trigger: AGGGAAGGGAGAACAGGAGCACTCCCAGCAGAAAGA...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGTCCTCCTCCTCTTTCTaGTGGGAGTGCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGSSSSF*WECSCS
Trigger: AGAACAGGAGCACTCCCAGCAGAAAGAGGAGGAGGA...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCGTTGTGGGGCTGCCCTaGAAAGGATGTTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LGRLEAASLPEAASGPSGVVGLP*KGCSRA
Trigger: TGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAAC...GCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp ACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTGGCTGCTCGAGCAGCTGGCGGTGTaGGGCCGGGCACCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: TSLDDGSSTASFSSAWLLEQLAV*GRAPRH
Trigger: GTGCCTAGGTGCCCGGCCCCACACCGCCAGCTGCTC...GAGCAGCCAGGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGGCCTGATCTCTCCTTGGCGCCTTaGAGAGCGAGGTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: GGCWWPPPPPPLPPQGPDLSLAP*RARSWS
Trigger: GCTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAG...ATCAGGCCCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp TTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCTGTTCCCCTCAGCCTTaGACTCCTGCATGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FLGDSLLSSLSLLLLLLLCSPQP*TPAWAP
Trigger: CGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACA...GAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp TCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCGGTTCAGCACTACAGTaGGGCCTTCTTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SSGTASSPASASSSSSSSGSALQ*GLLPRG
Trigger: TCCCCGAGGAAGAAGGCCCCACTGTAGTGCTGAACC...GGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp TTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCCAGCTCTGCTTCAATaGCCGACAGGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LGRLEAASLPEAASGPSGPALLQ*PTGSPA
Trigger: AGCTGGAGAGCCTGTCGGCCATTGAAGCAGAGCTGG...GCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCTTCTCTCTTTGCCTaGCACCCTGGCTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: GPSSSGTASSPASASSSSSSLFA*HPGSAL
Trigger: GAGTGCAGAGCCAGGGTGGCAGGCAAAGAGAGAAGA...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp AAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGGAGCAGCTGGCGGTGTaGGGCCGGGCACCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: KVVGLPCKGCSRAGRSQEEQLAV*GRAPRH
Trigger: GTGCCTAGGTGCCCGGCCCCACACCGCCAGCTGCTC...CTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCTCGGCCTGGCTGCTCTaGTTCTCAAGAACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LGRLEAASLPEAASGPSGSAWLL*FSRTSE
Trigger: CTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGA...GCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp GGGCCTGATTGTTCCCCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTCTGTGTTTCTTCTGCTaGTGTGCCCTCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GPDCSPQPWTPAWAPGGPLCFFC*CALSLA
Trigger: CGCCAAGGAGAGGGCACATCAGCAGAAGAAACACAG...AGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACAATCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR TCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCCATAACATCCTTGGATaGTGGCTCTTCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: GPSSSGTASSPASASSSSHNILG*WLFHRL
Trigger: GAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATG...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR TCA 90 bp GGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTAGGAGACAATTCCCTTCGGGGTCCTaGGCCTCCTCAGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GCPAKDVPGQVGVRSRRQFPSGS*ASSAPG
Trigger: GCCTGGGGCTGAGGAGGCTCAGGACCCCGAAGGGAA...TTGTCTCCTACTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGCCCCGACCCCGGAAATaGCGTCAGCGGTGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQPRPRK*RQRCRP
Trigger: GGGGCGGCACCGCTGACGTCATTTCCGGGGTCGGGG...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613166.3
CDS-3UTR GCA 90 bp ACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTGGCTGCTCCGCAGTGCCTCGGCGTaGGTCCGTCTGTCGGTCGAT +
Preference number: 4 (lower is better)
Translates to: TSLDDGSSTASFSSAWLLRSASA*VRLSVD
Trigger: ATCGACCGACAGACGGACGCACGCCGAGGCACTGCG...GAGCAGCCAGGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR GCA 90 bp GGGCCTGATTGTTCCCCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTTCAGCTCGGCCTGGCTaGTCTGGTTCTCAAGAACCT +
Preference number: 4 (lower is better)
Translates to: GPDCSPQPWTPAWAPGGPSARPG*SGSQEP
Trigger: AGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGA...AGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACAATCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR GCA 90 bp GGGCCTGATTGTTCCCCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTTCTTCTCTCTTTGCCTaGCACCCTGGCTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: GPDCSPQPWTPAWAPGGPSSLFA*HPGSAL
Trigger: GAGTGCAGAGCCAGGGTGGCAGGCAAAGAGAGAAGA...AGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACAATCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR GCA 90 bp TTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCACTTTCTCCAGCTCTaGTTCAATGGCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: LGRLEAASLPEAASGPSGHFLQL*FNGRQA
Trigger: AGCCTGTCGGCCATTGAAGCAGAGCTGGAGAAAGTG...GCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTAGGAGACAAGGGCAGGCTGGAGGCTaGCTCCCTACCGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCPAKDVPGQVGVRSRRQGQAGG*LPTGSS
Trigger: GCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCC...TTGTCTCCTACTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGTGGAGAGCGAGGTCTTaGAGCTCCTTCAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: GLGLGRLEAASLPEAASGWRARS*SSFSKF
Trigger: GAATTTACTGAAGGAGCTCCAAGACCTCGCTCTCCA...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GGGCCTGATTGTTCCCCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTTCGGCCTGGCTGCTCTaGTTCTCAAGAACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GPDCSPQPWTPAWAPGGPSAWLL*FSRTSE
Trigger: CTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGA...AGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACAATCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCTTTCAGCTCGGCCTaGCTGCTCTGGTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GPSSSGTASSPASASSSSSFSSA*LLWFSR
Trigger: TCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGA...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp TTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCTGCAGTTGTGCCCAGTaGATAGGATGGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LGRLEAASLPEAASGPSGCSCAQ*IGWRKG
Trigger: TCCCTTCCTCCATCCTATCCACTGGGCACAACTGCA...GCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp TTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCATAACATCCTTGGATaGTGGCTCTTCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: FLGDSLLSSLSLLLLLLLHNILG*WLFHRL
Trigger: GAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATG...GAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR TCA 90 bp ACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTGGCTGCTCCTGTCCACCAGACCCTaGGAGAGGCCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: TSLDDGSSTASFSSAWLLLSTRP*ERPSLS
Trigger: GGACAGTGAGGGCCTCTCTCAGGGTCTGGTGGACAG...GAGCAGCCAGGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGGACCTGGAGAGCGAGGTCTTaGAGCTCCTTCAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: GWRLPPYRKQHPGHLARTWRARS*SSFSKF
Trigger: GAATTTACTGAAGGAGCTCCAAGACCTCGCTCTCCA...GGTCCTGGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GGGCCTGATTGTTCCCCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTTCTTTCAGCTCGGCCTaGCTGCTCTGGTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GPDCSPQPWTPAWAPGGPSFSSA*LLWFSR
Trigger: TCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGA...AGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACAATCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR TCA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGTTCCCTTCGGGGTCCTaGGCCTCCTCAGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQFPSGS*ASSAPG
Trigger: GCCTGGGGCTGAGGAGGCTCAGGACCCCGAAGGGAA...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCTTAAAGTTGTGGGGCTaGCCTGCAAAGGATGTTCCA +
Preference number: 4 (lower is better)
Translates to: LGRLEAASLPEAASGPSGLKLWG*PAKDVP
Trigger: TGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAA...GCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp CCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTTGGAGAGCGAGGTCTTaGAGCTCCTTCAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: PRGQPPLQPQPPPPPPPPWRARS*SSFSKF
Trigger: GAATTTACTGAAGGAGCTCCAAGACCTCGCTCTCCA...AGGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp ACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTGGCTGCTCTGTTCCCCTCAGCCTTaGACTCCTGCATGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TSLDDGSSTASFSSAWLLCSPQP*TPAWAP
Trigger: CGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACA...GAGCAGCCAGGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGTCCTCCCGGGAGGATaGCCTCCAGCCTCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQVLPGG*PPASSQ
Trigger: CTGCGACGAGGCTGGAGGCCATCCTCCCGGGAGGAC...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp AAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGCAGCTCCTGGTCCTCTaGTCTGCGGTTTGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: KVVGLPCKGCSRAGRSQEQLLVL*SAVCAA
Trigger: GGCAGCGCAAACCGCAGACCAGAGGACCAGGAGCTG...CTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp TTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCAAAGTGTGTCGGAGATaGCCTCAACGATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: LGRLEAASLPEAASGPSGKVCRR*PQRCIS
Trigger: TGAAATGCATCGTTGAGGTCATCTCCGACACACTTT...GCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp GGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGGACCGTTCTCAAGAACCTCTaGGAGTTCATCTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: GWRLPPYRKQHPGHLARTVLKNL*EFIFKT
Trigger: GGTTTTGAAGATGAACTCTCAGAGGTTCTTGAGAAC...GGTCCTGGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGCGCAGTGCCTCGGCGTaGGTCCGTCTGTCGGTCGAT +
Preference number: 4 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQRSASA*VRLSVD
Trigger: ATCGACCGACAGACGGACGCACGCCGAGGCACTGCG...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGCCCCGCCGTAGTGCCTaGAGCTGGTGGGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQPRRSA*SWWATF
Trigger: GAAAGTGGCCCACCAGCTGCAGGCACTACGGCGGGG...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGGACCAAGGTCAGAAGTTATTaGAGTTGTGCCCAGTGGATA +
Preference number: 4 (lower is better)
Translates to: GWRLPPYRKQHPGHLARTKVRSY*SCAQWI
Trigger: TATCCACTGGGCACAACTGCAATAACTTCTGACCTT...GGTCCTGGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGAGCAGCTGGCGGTGTaGGGCCGGGCACCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPEQLAV*GRAPRH
Trigger: GTGCCTAGGTGCCCGGCCCCACACCGCCAGCTGCTC...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGGACCTCTGATGTCTCAGAATaGAAAGGATCCGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GWRLPPYRKQHPGHLARTSDVSE*KGSVHL
Trigger: GAGATGAACGGATCCTTTCCATTCTGAGACATCAGA...GGTCCTGGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCTGGAGAGCGAGGTCTTaGAGCTCCTTCAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: FLGDSLLSSLSLLLLLLLWRARS*SSFSKF
Trigger: GAATTTACTGAAGGAGCTCCAAGACCTCGCTCTCCA...GAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp AAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGCTCTCCTTGGCGCCTTaGAGAGCGAGGTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KVVGLPCKGCSRAGRSQELSLAP*RARSWS
Trigger: GCTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAG...CTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTAGGAGACAACTCTCCTTGGCGCCTTaGAGAGCGAGGTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: GCPAKDVPGQVGVRSRRQLSLAP*RARSWS
Trigger: GCTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAG...TTGTCTCCTACTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp TTCTCCATAACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCCTGTCCACCAGACCCTaGGAGAGGCCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: FSITSLDDGSSTASFSSALSTRP*ERPSLS
Trigger: GGACAGTGAGGGCCTCTCTCAGGGTCTGGTGGACAG...GGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR GCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTGGGCTGGGGGCGCAGTaGCTCGGCGTGCGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCGLGAQ*LGVRPS
Trigger: AGACGGACGCACGCCGAGGCACTGCGCCCCCAGCCC...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GGGCCTGATTGTTCCCCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTTTCACCACTTTTCTCTaGCTCCTTGGAATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GPDCSPQPWTPAWAPGGPFTTFL*LLGILS
Trigger: AGAGAGGATTCCAAGGAGGCAGAGAAAAGTGGTGAA...AGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACAATCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR GCA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGACCCCGGAAGAGGCCTTaGGGGACCACTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGPRKRP*GTTAIS
Trigger: GGAGATGGCAGTGGTCCCGCAAGGCCTCTTCCGGGG...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGCCTGGTCCTCTGGTCTaGGGTTTGCGCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQPGPLV*GLRCPP
Trigger: AGGAGGGCAGCGCAAACCGCAGACCAGAGGACCAGG...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GGGCCTTCTTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCTGATGTCTCAGAATaGAAAGGATCCGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GPSSSGTASSPASASSSSSDVSE*KGSVHL
Trigger: GAGATGAACGGATCCTTTCCATTCTGAGACATCAGA...GGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAAGAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp TTCTCCATAACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCGTCCCCCTCGGCCTGTaGGCCTGGGTATTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FSITSLDDGSSTASFSSAVPLGL*AWVFLA
Trigger: AGCCAGAAATACCCAGGCCCACAGGCCGAGGGGGAC...GGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGGCGATAGGGTGGCCTaGGCTTGGGCAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPGDRVA*AWAGWR
Trigger: CCTCCAGCCTGCCCAAGCCCAGGCCACCCTATCGCC...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp TTCCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCGTTCTCAAGAACCTCTaGGAGTTCATCTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: FLGDSLLSSLSLLLLLLLVLKNL*EFIFKT
Trigger: GGTTTTGAAGATGAACTCTCAGAGGTTCTTGAGAAC...GAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR TCA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGACTGTCCACCAGACCCTaGGAGAGGCCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGLSTRP*ERPSLS
Trigger: GGACAGTGAGGGCCTCTCTCAGGGTCTGGTGGACAG...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCACGGGGCTCGAGCACTaGAGTGGCAGGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSTGLEH*SGRSGG
Trigger: GCCACCGCTCCTGCCACTGCAGTGCTCGAGCCCCGT...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp GGTGGGTGTTGGTGGCCTCCTCCTCCTCCTCCTCTTCCTCCCCAGGGGCCTGATTCTGATGTCTCAGAATaGAAAGGATCCGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GGCWWPPPPPPLPPQGPDSDVSE*KGSVHL
Trigger: GAGATGAACGGATCCTTTCCATTCTGAGACATCAGA...ATCAGGCCCCTGGGGAGGAAGAGGAGGAGGAGGAGGAGGCCACCAACACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGCTCTCCTTGGCGCCTTaGAGAGCGAGGTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQLSLAP*RARSWS
Trigger: GCTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAG...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp AAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTCGGCCTGGCTGCTCTaGTTCTCAAGAACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KVVGLPCKGCSRAGRSQESAWLL*FSRTSE
Trigger: CTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGA...CTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GGGCCTGATTGTTCCCCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTTTTTCTCTGCCTCCTTaGAATCCTCTCTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GPDCSPQPWTPAWAPGGPFSLPP*NPLFSP
Trigger: TGGAGAAAAGAGAGGATTCCAAGGAGGCAGAGAAAA...AGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACAATCAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCCCTTGGACTCCTGCATaGGCTCCGGGAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSPWTPA*APGGPG
Trigger: CCCAGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGG...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGACAGCTCCTGGTCCTCTaGTCTGCGGTTTGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGQLLVL*SAVCAA
Trigger: GGCAGCGCAAACCGCAGACCAGAGGACCAGGAGCTG...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCGGCGATAGGGTGGCCTaGGCTTGGGCAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSGDRVA*AWAGWR
Trigger: CCTCCAGCCTGCCCAAGCCCAGGCCACCCTATCGCC...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp AAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGCCTTTCAGCTCGGCCTaGCTGCTCTGGTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: KVVGLPCKGCSRAGRSQEPFSSA*LLWFSR
Trigger: TCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGG...CTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334654.4
ENST00000630996.1
CDS-3UTR TCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTTCCCTTCGGGGTCCTaGGCCTCCTCAGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCFPSGS*ASSAPG
Trigger: GCCTGGGGCTGAGGAGGCTCAGGACCCCGAAGGGAA...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGTTCCCTTCGGGGTCCTaGGCCTCCTCAGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRFPSGS*ASSAPG
Trigger: GCCTGGGGCTGAGGAGGCTCAGGACCCCGAAGGGAA...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp CAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTTCCCGCAAGCTCCCCTaGACGGGGCTCGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: QRRNRQCLKLWGCPAKDVSRKLP*TGLEHC
Trigger: GCAGTGCTCGAGCCCCGTGCAGGGGAGCTTGCGGGA...AACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp AAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTTTCTTCTGCTGATGTaGCCTCTCCTTGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: KVVGLPCKGCSRAGRSQEFLLLM*PLLGAL
Trigger: CAAGGCGCCAAGGAGAGGGCACATCAGCAGAAGAAA...CTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTAGGAGACAATCTTTCTGCTGGGAGTaGTCCTGTTCTCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GCPAKDVPGQVGVRSRRQSFCWE*SCSPFP
Trigger: AGGGAAGGGAGAACAGGAGCACTCCCAGCAGAAAGA...TTGTCTCCTACTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp AAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGCACTTTCTCCAGCTCTaGTTCAATGGCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: KVVGLPCKGCSRAGRSQEHFLQL*FNGRQA
Trigger: AGCCTGTCGGCCATTGAAGCAGAGCTGGAGAAAGTG...CTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTCATCTGGCCAGGACCTaGCAAGGGGACAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPHLART*QGDSRA
Trigger: GGCTCTGCTGTCCCCTTGGCAGGTCCTGGCCAGATG...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGGGGCAGGCTGGAGGCTaGCTCCCTACCGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLGQAGG*LPTGSS
Trigger: GCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCC...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTAGGAGACAATCTTTCAGCTCGGCCTaGCTGCTCTGGTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GCPAKDVPGQVGVRSRRQSFSSA*LLWFSR
Trigger: TCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGA...TTGTCTCCTACTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCTTGGACTCCTGCATaGGCTCCGGGAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLPWTPA*APGGPG
Trigger: CCCAGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGG...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGCTGGCTGGAGGGTaGGTGTTGGTGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSRLAGG*VLVASS
Trigger: GGAGGAGGCCACCAACACCCACCCTCCAGCCAGCCT...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp TTCTCCATAACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCGGTTCAGCACTACAGTaGGGCCTTCTTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: FSITSLDDGSSTASFSSAGSALQ*GLLPRG
Trigger: TCCCCGAGGAAGAAGGCCCCACTGTAGTGCTGAACC...GGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGAGCTCCTTGGCCAGCTaGTCCATCTTGCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQSSLAS*SILLQR
Trigger: ACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCT...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGGGCGATAGGGTGGCCTaGGCTTGGGCAGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLGDRVA*AWAGWR
Trigger: CCTCCAGCCTGCCCAAGCCCAGGCCACCCTATCGCC...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp TTCTCCATAACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCCTGTGTTTCTTCTGCTaGTGTGCCCTCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: FSITSLDDGSSTASFSSALCFFC*CALSLA
Trigger: CGCCAAGGAGAGGGCACATCAGCAGAAGAAACACAG...GGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR TCA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGCTGTGTTTCTTCTGCTaGTGTGCCCTCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQLCFFC*CALSLA
Trigger: CGCCAAGGAGAGGGCACATCAGCAGAAGAAACACAG...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp CACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGAAGCTGTCCACCAGACCCTaGGAGAGGCCCTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: HQKVRSYCSCAQWIGWRKLSTRP*ERPSLS
Trigger: GGACAGTGAGGGCCTCTCTCAGGGTCTGGTGGACAG...CTTCCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCGCAGTGCCTCGGCGTaGGTCCGTCTGTCGGTCGAT +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLRSASA*VRLSVD
Trigger: ATCGACCGACAGACGGACGCACGCCGAGGCACTGCG...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTCTCCATAACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTCAGCTCGGCCTGGCTaGTCTGGTTCTCAAGAACCT +
Preference number: 4 (lower is better)
Translates to: FSITSLDDGSSTASFSSASARPG*SGSQEP
Trigger: AGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGA...GGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR GCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCCGGAAGAGGCCTTaGGGGACCACTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLPRKRP*GTTAIS
Trigger: GGAGATGGCAGTGGTCCCGCAAGGCCTCTTCCGGGG...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCCCTGGTCCTCTGGTCTaGGGTTTGCGCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSPGPLV*GLRCPP
Trigger: AGGAGGGCAGCGCAAACCGCAGACCAGAGGACCAGG...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp CAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCCCGCCGTAGTGCCTaGAGCTGGTGGGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: QRRNRQCLKLWGCPAKDVPRRSA*SWWATF
Trigger: GAAAGTGGCCCACCAGCTGCAGGCACTACGGCGGGG...AACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTTGTGGGGCTGCCCTaGAAAGGATGTTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGVVGLP*KGCSRA
Trigger: TGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAAC...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTCTCCATAACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTCGGCCTGGCTGCTCTaGTTCTCAAGAACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FSITSLDDGSSTASFSSASAWLL*FSRTSE
Trigger: CTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGA...GGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAAGGCTCTCCAGCTCCTaGTCCTCTGGTCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGRLSSS*SSGLRF
Trigger: AAACCGCAGACCAGAGGACCAGGAGCTGGAGAGCCT...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTCGTAGTGCCTGCAGCTaGTGGGCCACTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPRSACS*WATFSS
Trigger: GCTGGAGAAAGTGGCCCACCAGCTGCAGGCACTACG...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTCCTGGTCCTCTGGTCTaGGGTTTGCGCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCPGPLV*GLRCPP
Trigger: AGGAGGGCAGCGCAAACCGCAGACCAGAGGACCAGG...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp CAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCATCTGGCCAGGACCTaGCAAGGGGACAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QRRNRQCLKLWGCPAKDVHLART*QGDSRA
Trigger: GGCTCTGCTGTCCCCTTGGCAGGTCCTGGCCAGATG...AACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGTTGTGGGGCTGCCCTaGAAAGGATGTTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPVVGLP*KGCSRA
Trigger: TGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAAC...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp AAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTTAAAGTTGTGGGGCTaGCCTGCAAAGGATGTTCCA +
Preference number: 4 (lower is better)
Translates to: KVVGLPCKGCSRAGRSQELKLWG*PAKDVP
Trigger: TGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAA...CTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGTCTTTCAGCTCGGCCTaGCTGCTCTGGTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQSFSSA*LLWFSR
Trigger: TCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGA...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp TCTTTCAGCTCGGCCTGGCTGCTCTGGTTCTCAAGAACCTCTGAGAGTTCATCTGCCTGGCTCCGTCTGTaGCTTCACCACTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SFSSAWLLWFSRTSESSSAWLRL*LHHFSL
Trigger: CAGAGAAAAGTGGTGAAGCCACAGACGGAGCCAGGC...AGATGAACTCTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGGTTCAGCACTACAGTaGGGCCTTCTTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPGSALQ*GLLPRG
Trigger: TCCCCGAGGAAGAAGGCCCCACTGTAGTGCTGAACC...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTAGCTCCTTGGCCAGCTaGTCCATCTTGCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPSSLAS*SILLQR
Trigger: ACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCT...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCCAGCCGTCAGCTCCTTaGCCAGCTGGTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSQPSAP*PAGPSC
Trigger: GCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTG...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp CAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCAGCTCCTGGTCCTCTaGTCTGCGGTTTGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: QRRNRQCLKLWGCPAKDVQLLVL*SAVCAA
Trigger: GGCAGCGCAAACCGCAGACCAGAGGACCAGGAGCTG...AACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTCCAGCTCTGCTTCAATaGCCGACAGGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPPALLQ*PTGSPA
Trigger: AGCTGGAGAGCCTGTCGGCCATTGAAGCAGAGCTGG...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGTGCAGTTGTGCCCAGTaGATAGGATGGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQCSCAQ*IGWRKG
Trigger: TCCCTTCCTCCATCCTATCCACTGGGCACAACTGCA...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTCCAGCTGGTCCATCTTaGTCCAGCGTTTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPPAGPS*SSVWSP
Trigger: AGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGG...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGACACTTTCTCCAGCTCTaGTTCAATGGCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGHFLQL*FNGRQA
Trigger: AGCCTGTCGGCCATTGAAGCAGAGCTGGAGAAAGTG...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAGAGCAGCTGGCGGTGTaGGGCCGGGCACCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVREQLAV*GRAPRH
Trigger: GTGCCTAGGTGCCCGGCCCCACACCGCCAGCTGCTC...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCTCAAAACATTCCTaGCTGACAGGCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGVSKHS*LTGMGL
Trigger: CAGCCCCATGCCTGTCAGCCAGGAATGTTTTGAGAC...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCTCTCCTTGGCGCCTTaGAGAGCGAGGTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLLSLAP*RARSWS
Trigger: GCTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAG...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp ACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTGGCTGCTCTTTTCTCTGCCTCCTTaGAATCCTCTCTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSLDDGSSTASFSSAWLLFSLPP*NPLFSP
Trigger: TGGAGAAAAGAGAGGATTCCAAGGAGGCAGAGAAAA...GAGCAGCCAGGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGAGTCCTCCCACTCCTTaGAGAGCCGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLSPPTP*RAAPPP
Trigger: AGGAGGAGGAGCGGCTCTCCAAGGAGTGGGAGGACT...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGAGTCCTCCCACTCCTTaGAGAGCCGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRSPPTP*RAAPPP
Trigger: AGGAGGAGGAGCGGCTCTCCAAGGAGTGGGAGGACT...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGCGTAGTGCCTGCAGCTaGTGGGCCACTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRRSACS*WATFSS
Trigger: GCTGGAGAAAGTGGCCCACCAGCTGCAGGCACTACG...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCGTAGTGCCTGCAGCTaGTGGGCCACTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLRSACS*WATFSS
Trigger: GCTGGAGAAAGTGGCCCACCAGCTGCAGGCACTACG...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAACAGTGGCAGGAGCGGTaGCAGCAGCAGCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SYRICYSQEFSAFTKRSEQWQER*QQQRPR
Trigger: GCGAGGGCGCTGCTGCTGCCACCGCTCCTGCCACTG...TTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613166.3
CDS-3UTR GCA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGGGCTGGGGGCGCAGTaGCTCGGCGTGCGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKGLGAQ*LGVRPS
Trigger: AGACGGACGCACGCCGAGGCACTGCGCCCCCAGCCC...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCCCAGCTGGTCCATCTTaGTCCAGCGTTTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSPAGPS*SSVWSP
Trigger: AGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGG...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTGGTTCAGCACTACAGTaGGGCCTTCTTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCGSALQ*GLLPRG
Trigger: TCCCCGAGGAAGAAGGCCCCACTGTAGTGCTGAACC...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGGAAGGAGAGCTTCATaGAACTGTCCCGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPGRRAS*NCPGCP
Trigger: AGGACAACCGGGACAGTTCCATGAAGCTCTCCTTCC...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTGTCCTCCCGGGAGGATaGCCTCCAGCCTCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSVLPGG*PPASSQ
Trigger: CTGCGACGAGGCTGGAGGCCATCCTCCCGGGAGGAC...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGAGGCTCTCCAGCTCCTaGTCCTCTGGTCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLRLSSS*SSGLRF
Trigger: AAACCGCAGACCAGAGGACCAGGAGCTGGAGAGCCT...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGCTGTGTTTCTTCTGCTaGTGTGCCCTCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRLCFFC*CALSLA
Trigger: CGCCAAGGAGAGGGCACATCAGCAGAAGAAACACAG...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGTCTTCTCTCTTTGCCTaGCACCCTGGCTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRSSLFA*HPGSAL
Trigger: GAGTGCAGAGCCAGGGTGGCAGGCAAAGAGAGAAGA...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGTCTTCTCTCTTTGCCTaGCACCCTGGCTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLSSLFA*HPGSAL
Trigger: GAGTGCAGAGCCAGGGTGGCAGGCAAAGAGAGAAGA...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp CACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGAAGTCCTCCTCCTCTTTCTaGTGGGAGTGCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: HQKVRSYCSCAQWIGWRKSSSSF*WECSCS
Trigger: AGAACAGGAGCACTCCCAGCAGAAAGAGGAGGAGGA...CTTCCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTCCAGCTGGTCCATCTTaGTCCAGCGTTTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCPAGPS*SSVWSP
Trigger: AGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGG...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTGTCTGCGGTTTGCGCTaGCCTCCTCCTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCVCGLR*PPPLSS
Trigger: AGAAGAAAGAGGAGGAGGGCAGCGCAAACCGCAGAC...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp CAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTGTCTGCGGTTTGCGCTaGCCTCCTCCTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QRRNRQCLKLWGCPAKDVVCGLR*PPPLSS
Trigger: AGAAGAAAGAGGAGGAGGGCAGCGCAAACCGCAGAC...AACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCCACTTTCTCCAGCTCTaGTTCAATGGCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSHFLQL*FNGRQA
Trigger: AGCCTGTCGGCCATTGAAGCAGAGCTGGAGAAAGTG...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGATGGAGAGCGAGGTCTTaGAGCTCCTTCAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGWRARS*SSFSKF
Trigger: GAATTTACTGAAGGAGCTCCAAGACCTCGCTCTCCA...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGTCGGCCTGGCTGCTCTaGTTCTCAAGAACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRSAWLL*FSRTSE
Trigger: CTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGA...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp CAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTTCGGCCTGGCTGCTCTaGTTCTCAAGAACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QRRNRQCLKLWGCPAKDVSAWLL*FSRTSE
Trigger: CTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGA...AACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp CAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTGCCTGGCTCCGTCTGTaGCTTCACCACTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QRRNRQCLKLWGCPAKDVAWLRL*LHHFSL
Trigger: CAGAGAAAAGTGGTGAAGCCACAGACGGAGCCAGGC...AACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGTCTTGCTCCAGCGTTTaGAGTCCTCCCACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLSCSSV*SPPTPW
Trigger: CCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGA...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp CACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGAAGGGAAGGAGAGCTTCATaGAACTGTCCCGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: HQKVRSYCSCAQWIGWRKGRRAS*NCPGCP
Trigger: AGGACAACCGGGACAGTTCCATGAAGCTCTCCTTCC...CTTCCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTGTCCTCCCGGGAGGATaGCCTCCAGCCTCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGVLPGG*PPASSQ
Trigger: CTGCGACGAGGCTGGAGGCCATCCTCCCGGGAGGAC...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAAAAGTGTGTCGGAGATaGCCTCAACGATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGKVCRR*PQRCIS
Trigger: TGAAATGCATCGTTGAGGTCATCTCCGACACACTTT...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTCATAACATCCTTGGATaGTGGCTCTTCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCHNILG*WLFHRL
Trigger: GAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATG...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGTTTCTTCTGCTGATGTaGCCTCTCCTTGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLFLLLM*PLLGAL
Trigger: CAAGGCGCCAAGGAGAGGGCACATCAGCAGAAGAAA...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTTTCTTCTGCTGATGTaGCCTCTCCTTGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCFLLLM*PLLGAL
Trigger: CAAGGCGCCAAGGAGAGGGCACATCAGCAGAAGAAA...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGTCTTTCTGCTGGGAGTaGTCCTGTTCTCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLSFCWE*SCSPFP
Trigger: AGGGAAGGGAGAACAGGAGCACTCCCAGCAGAAAGA...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCTCCTCCTCTTTCTaGTGGGAGTGCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCSSSSF*WECSCS
Trigger: AGAACAGGAGCACTCCCAGCAGAAAGAGGAGGAGGA...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGACCTGGTCCTCTGGTCTaGGGTTTGCGCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRPGPLV*GLRCPP
Trigger: AGGAGGGCAGCGCAAACCGCAGACCAGAGGACCAGG...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGACATCTGGCCAGGACCTaGCAAGGGGACAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRHLART*QGDSRA
Trigger: GGCTCTGCTGTCCCCTTGGCAGGTCCTGGCCAGATG...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTGTCTCAAAACATTCCTaGCTGACAGGCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCVSKHS*LTGMGL
Trigger: CAGCCCCATGCCTGTCAGCCAGGAATGTTTTGAGAC...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTAGATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAGTCCTCCCGGGAGGATaGCCTCCAGCCTCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LDKVHTEYVTVRSSQLSPVLPGG*PPASSQ
Trigger: CTGCGACGAGGCTGGAGGCCATCCTCCCGGGAGGAC...TGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR TCA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTTCTCAAGAACCTCTaGGAGTTCATCTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGVLKNL*EFIFKT
Trigger: GGTTTTGAAGATGAACTCTCAGAGGTTCTTGAGAAC...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp TCTTTCAGCTCGGCCTGGCTGCTCTGGTTCTCAAGAACCTCTGAGAGTTCATCTGTTCTCAAGAACCTCTaGGAGTTCATCTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: SFSSAWLLWFSRTSESSSVLKNL*EFIFKT
Trigger: GGTTTTGAAGATGAACTCTCAGAGGTTCTTGAGAAC...AGATGAACTCTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR GCA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGCGCAGTGCCTCGGCGTaGGTCCGTCTGTCGGTCGAT +
Preference number: 4 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKRSASA*VRLSVD
Trigger: ATCGACCGACAGACGGACGCACGCCGAGGCACTGCG...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGCCCCGGAAGAGGCCTTaGGGGACCACTGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKPRKRP*GTTAIS
Trigger: GGAGATGGCAGTGGTCCCGCAAGGCCTCTTCCGGGG...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGCCCCGCCGTAGTGCCTaGAGCTGGTGGGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKPRRSA*SWWATF
Trigger: GAAAGTGGCCCACCAGCTGCAGGCACTACGGCGGGG...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAGATGTGCCCTCTCCTTaGCGCCTTGGAGAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRDVPSP*RLGERG
Trigger: ACCTCGCTCTCCAAGGCGCCAAGGAGAGGGCACATC...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGATGTTCCCCTCAGCCTTaGACTCCTGCATGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRCSPQP*TPAWAP
Trigger: CGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACA...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp TCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAATGTTCCCCTCAGCCTTaGACTCCTGCATGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SYRICYSQEFSAFTKRSECSPQP*TPAWAP
Trigger: CGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACA...TTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGACAGCCGTCAGCTCCTTaGCCAGCTGGTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRQPSAP*PAGPSC
Trigger: GCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTG...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTCAGCCGTCAGCTCCTTaGCCAGCTGGTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSQPSAP*PAGPSC
Trigger: GCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTG...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTTCTGATGTCTCAGAATaGAAAGGATCCGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPSDVSE*KGSVHL
Trigger: GAGATGAACGGATCCTTTCCATTCTGAGACATCAGA...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTGATGTGCCCTCTCCTTaGCGCCTTGGAGAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGDVPSP*RLGERG
Trigger: ACCTCGCTCTCCAAGGCGCCAAGGAGAGGGCACATC...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTTTTTCTCTGCCTCCTTaGAATCCTCTCTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPFSLPP*NPLFSP
Trigger: TGGAGAAAAGAGAGGATTCCAAGGAGGCAGAGAAAA...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp TTAGATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCACTCGGCCTGTGGGCCTaGGTATTTCTGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LDKVHTEYVTVRSSQLSPLGLWA*VFLAGE
Trigger: CTCCCCAGCCAGAAATACCCAGGCCCACAGGCCGAG...TGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp TTAGATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAGTCCCCCTCGGCCTGTaGGCCTGGGTATTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LDKVHTEYVTVRSSQLSPVPLGL*AWVFLA
Trigger: AGCCAGAAATACCCAGGCCCACAGGCCGAGGGGGAC...TGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTATCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGGCTCTCCAGCTCCTaGTCCTCTGGTCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRRLSSS*SSGLRF
Trigger: AAACCGCAGACCAGAGGACCAGGAGCTGGAGAGCCT...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAACCAGCTCTGCTTCAATaGCCGACAGGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SYRICYSQEFSAFTKRSEPALLQ*PTGSPA
Trigger: AGCTGGAGAGCCTGTCGGCCATTGAAGCAGAGCTGG...TTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCCAATGTTTAAAGTTGTaGGGCTGCCCTGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSQCLKL*GCPAKD
Trigger: ATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTAAAGTGTGTCGGAGATaGCCTCAACGATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCKVCRR*PQRCIS
Trigger: TGAAATGCATCGTTGAGGTCATCTCCGACACACTTT...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAAAACATTCCTGGCTaGCAGGCATGGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGQNIPG*QAWGWA
Trigger: AGCCCAGCCCCATGCCTGTCAGCCAGGAATGTTTTG...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTCTGTGTTTCTTCTGCTaGTGTGCCCTCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSLCFFC*CALSLA
Trigger: CGCCAAGGAGAGGGCACATCAGCAGAAGAAACACAG...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCGTTCTCAAGAACCTCTaGGAGTTCATCTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSVLKNL*EFIFKT
Trigger: GGTTTTGAAGATGAACTCTCAGAGGTTCTTGAGAAC...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAATCAGCTCGGCCTGGCTaGTCTGGTTCTCAAGAACCT +
Preference number: 4 (lower is better)
Translates to: SYRICYSQEFSAFTKRSESARPG*SGSQEP
Trigger: AGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGA...TTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTTCACCACTTTTCTCTaGCTCCTTGGAATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCFTTFL*LLGILS
Trigger: AGAGAGGATTCCAAGGAGGCAGAGAAAAGTGGTGAA...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAGTCTGCGGTTTGCGCTaGCCTCCTCCTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRVCGLR*PPPLSS
Trigger: AGAAGAAAGAGGAGGAGGGCAGCGCAAACCGCAGAC...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGAAGTTATTGCAGTTGTaGCCAGTGGATAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRKLLQL*PVDRME
Trigger: CTCCATCCTATCCACTGGGCACAACTGCAATAACTT...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGATGTGCCCTCTCCTTaGCGCCTTGGAGAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKDVPSP*RLGERG
Trigger: ACCTCGCTCTCCAAGGCGCCAAGGAGAGGGCACATC...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTTCTTGCTCCAGCGTTTaGAGTCCTCCCACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSSCSSV*SPPTPW
Trigger: CCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGA...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTAGCTCCTTGGCCAGCTaGTCCATCTTGCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGSSLAS*SILLQR
Trigger: ACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCT...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTAGGCTCTCCAGCTCCTaGTCCTCTGGTCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGRLSSS*SSGLRF
Trigger: AAACCGCAGACCAGAGGACCAGGAGCTGGAGAGCCT...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp CAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCAATGTTTAAAGTTGTaGGGCTGCCCTGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: QRRNRQCLKLWGCPAKDVQCLKL*GCPAKD
Trigger: ATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG...AACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTTCAGCTCGGCCTGGCTaGTCTGGTTCTCAAGAACCT +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGSARPG*SGSQEP
Trigger: AGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGA...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCCAGCTGGTCCATCTTaGTCCAGCGTTTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGPAGPS*SSVWSP
Trigger: AGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGG...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTGTCTGCGGTTTGCGCTaGCCTCCTCCTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGVCGLR*PPPLSS
Trigger: AGAAGAAAGAGGAGGAGGGCAGCGCAAACCGCAGAC...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAAACTTCTAGAAAGCTaGCTGTGTTCAGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSKLLES*LCSEKE
Trigger: TTCCTTCTCTGAACACAGGCAGCTTTCTAGAAGTTT...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGAAGGTCAGAAGTTATTaGAGTTGTGCCCAGTGGATA +
Preference number: 4 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRKVRSY*SCAQWI
Trigger: TATCCACTGGGCACAACTGCAATAACTTCTGACCTT...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp CAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTAAGGTCAGAAGTTATTaGAGTTGTGCCCAGTGGATA +
Preference number: 4 (lower is better)
Translates to: QRRNRQCLKLWGCPAKDVKVRSY*SCAQWI
Trigger: TATCCACTGGGCACAACTGCAATAACTTCTGACCTT...AACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTGTCTCAAAACATTCCTaGCTGACAGGCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSVSKHS*LTGMGL
Trigger: CAGCCCCATGCCTGTCAGCCAGGAATGTTTTGAGAC...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAGTCTCAAAACATTCCTaGCTGACAGGCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRVSKHS*LTGMGL
Trigger: CAGCCCCATGCCTGTCAGCCAGGAATGTTTTGAGAC...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGTCTGATGTCTCAGAATaGAAAGGATCCGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRSDVSE*KGSVHL
Trigger: GAGATGAACGGATCCTTTCCATTCTGAGACATCAGA...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTGCCTGGCTCCGTCTGTaGCTTCACCACTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGAWLRL*LHHFSL
Trigger: CAGAGAAAAGTGGTGAAGCCACAGACGGAGCCAGGC...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTTCTTGCTCCAGCGTTTaGAGTCCTCCCACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGSCSSV*SPPTPW
Trigger: CCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGA...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTGGAAGGAGAGCTTCATaGAACTGTCCCGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSGRRAS*NCPGCP
Trigger: AGGACAACCGGGACAGTTCCATGAAGCTCTCCTTCC...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp TCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGGAAGGAGAGCTTCATaGAACTGTCCCGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SYRICYSQEFSAFTKRSEGRRAS*NCPGCP
Trigger: AGGACAACCGGGACAGTTCCATGAAGCTCTCCTTCC...TTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGCCAGCTCTGCTTCAATaGCCGACAGGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKPALLQ*PTGSPA
Trigger: AGCTGGAGAGCCTGTCGGCCATTGAAGCAGAGCTGG...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTTGCAGTTGTGCCCAGTaGATAGGATGGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSCSCAQ*IGWRKG
Trigger: TCCCTTCCTCCATCCTATCCACTGGGCACAACTGCA...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCATAACATCCTTGGATaGTGGCTCTTCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGHNILG*WLFHRL
Trigger: GAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATG...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CCA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGTCTTGCTCCAGCGTTTaGAGTCCTCCCACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKSCSSV*SPPTPW
Trigger: CCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGA...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTTTAAAGTTGTGGGGCTaGCCTGCAAAGGATGTTCCA +
Preference number: 4 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSLKLWG*PAKDVP
Trigger: TGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAA...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGTGCAGTTGTGCCCAGTaGATAGGATGGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKCSCAQ*IGWRKG
Trigger: TCCCTTCCTCCATCCTATCCACTGGGCACAACTGCA...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTAAGTTATTGCAGTTGTaGCCAGTGGATAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSKLLQL*PVDRME
Trigger: CTCCATCCTATCCACTGGGCACAACTGCAATAACTT...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR TCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTAAAGTGTGTCGGAGATaGCCTCAACGATGCATTTCA +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGKVCRR*PQRCIS
Trigger: TGAAATGCATCGTTGAGGTCATCTCCGACACACTTT...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTTTCACCACTTTTCTCTaGCTCCTTGGAATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGFTTFL*LLGILS
Trigger: AGAGAGGATTCCAAGGAGGCAGAGAAAAGTGGTGAA...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp TCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAAAACTTCTAGAAAGCTaGCTGTGTTCAGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SYRICYSQEFSAFTKRSEKLLES*LCSEKE
Trigger: TTCCTTCTCTGAACACAGGCAGCTTTCTAGAAGTTT...TTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTAAACTTCTAGAAAGCTaGCTGTGTTCAGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSKLLES*LCSEKE
Trigger: TTCCTTCTCTGAACACAGGCAGCTTTCTAGAAGTTT...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAAACTTCTAGAAAGCTaGCTGTGTTCAGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRKLLES*LCSEKE
Trigger: TTCCTTCTCTGAACACAGGCAGCTTTCTAGAAGTTT...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR GCA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGAAGTTATTGCAGTTGTaGCCAGTGGATAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKKLLQL*PVDRME
Trigger: CTCCATCCTATCCACTGGGCACAACTGCAATAACTT...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CCA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTTTTTCTCTGCCTCCTTaGAATCCTCTCTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGFSLPP*NPLFSP
Trigger: TGGAGAAAAGAGAGGATTCCAAGGAGGCAGAGAAAA...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR GCA 90 bp TTAGATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAGGTCAGAAGTTATTaGAGTTGTGCCCAGTGGATA +
Preference number: 4 (lower is better)
Translates to: LDKVHTEYVTVRSSQLSPKVRSY*SCAQWI
Trigger: TATCCACTGGGCACAACTGCAATAACTTCTGACCTT...TGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTATCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS CCA 90 bp CCAGGACAGCGGCGGAGCGCATGGCGGACCCGGGCGCCGAGCAGCTaGCGGTGTGGGGCCGGGCACCTAGGCACCGGGCGAGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: PGQRRSAWRTRAPSS*RCGAGHLGTGRGAA
Trigger: AGCCGCCCCTCGCCCGGTGCCTAGGTGCCCGGCCCCACACCGCCAGCTGCTCGGCGCCCGGGTCCGCCATGCGCTCCGCCGCTGTCCTGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556076.5
ENST00000613166.3
ENST00000627311.2
ENST00000630996.1
CDS CCA 90 bp CTTGCCCGGCGCAGAGCAGAAGAGCCAGGACAGCGGCGGAGCGCATaGCGGACCCGGGCGCCGAGCAGCTGGCGGTGTGGGGCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: LARRRAEEPGQRRSA*RTRAPSSWRCGAGH
Trigger: GTGCCCGGCCCCACACCGCCAGCTGCTCGGCGCCCGGGTCCGCCATGCGCTCCGCCGCTGTCCTGGCTCTTCTGCTCTGCGCCGGGCAAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556076.5
ENST00000613166.3
ENST00000627311.2
ENST00000630996.1
CDS TCA 90 bp GGGAGGATGGCCTCCAGCCTCGTCGCAGCTGCGGCCCAGGGCCCCTaGAGCCGTAGGCCCGGGCCCGGAAGGAGAGCTTCATGGAACTGT +
Preference number: 5 (lower is better)
Translates to: GRMASSLVAAAAQGP*SRRPGPGRRASWNC
Trigger: ACAGTTCCATGAAGCTCTCCTTCCGGGCCCGGGCCTACGGCTTCAGGGGCCCTGGGCCGCAGCTGCGACGAGGCTGGAGGCCATCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS-3UTR CAA 90 bp CCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTGCTGGAGGGTGGGTGTaGGTGGCCTCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PRGQPPLQPQPPPPPPPPAGGWV*VASSSS
Trigger: GGAGGAGGAGGAGGCCACCAACACCCACCCTCCAGC...AGGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CAA 90 bp CCTCGGGGACAGCCTCCTCTCCAGCCTCAGCCTCCTCCTCCTCCTCCTCCTCCTAGGGAGCGCAGTGACTaGCCCGGCGCAGAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: PRGQPPLQPQPPPPPPPPRERSD*PGAEQK
Trigger: CTTCTGCTCTGCGCCGGGCAAGTCACTGCGCTCCCT...AGGAGGAGGAGGAGGAGGAGGAGGCTGAGGCTGGAGAGGAGGCTGTCCCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CAA 90 bp GGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGGACCCCTCTCCTTGGCGCCTaGGAGAGCGAGGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GWRLPPYRKQHPGHLARTPLLGA*ESEVLE
Trigger: CTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAGG...GGTCCTGGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GGCCTGGGCTTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGATGGAACTGTCCCGGTaGTCCTCCTCCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GLGLGRLEAASLPEAASGMELSR*SSSSSC
Trigger: GCAGGAGGAGGAGGAGGACAACCGGGACAGTTCCAT...CCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAAGCCCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGGACCCCTCTGGTCTGCGGTTaGCGCTGCCCTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GWRLPPYRKQHPGHLARTPLVCG*RCPPPL
Trigger: AAGAGGAGGAGGGCAGCGCAAACCGCAGACCAGAGG...GGTCCTGGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS CCA 90 bp CCCTGCCAGCCGGTGTCTCAGCCCCGCCGTAGTGCCTGCAGCTGGTaGGCCACTTTCTCCAGCTCTGCTTCAATGGCCGACAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PCQPVSQPRRSACSW*ATFSSSASMADRLS
Trigger: GGAGAGCCTGTCGGCCATTGAAGCAGAGCTGGAGAAAGTGGCCCACCAGCTGCAGGCACTACGGCGGGGCTGAGACACCGGCTGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS CCA 90 bp CAGCCCTGCCAGCCGGTGTCTCAGCCCCGCCGTAGTGCCTGCAGCTaGTGGGCCACTTTCTCCAGCTCTGCTTCAATGGCCGACAGGCTC +
Preference number: 5 (lower is better)
Translates to: QPCQPVSQPRRSACS*WATFSSSASMADRL
Trigger: GAGCCTGTCGGCCATTGAAGCAGAGCTGGAGAAAGTGGCCCACCAGCTGCAGGCACTACGGCGGGGCTGAGACACCGGCTGGCAGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGGACCGGCATGGGGCTGGGCTaGGAAAGTGTGTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: GWRLPPYRKQHPGHLARTGMGLG*ESVSEM
Trigger: CATCTCCGACACACTTTCCAAGCCCAGCCCCATGCC...GGTCCTGGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCCTCTCCTTGGCGCCTaGGAGAGCGAGGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LGRLEAASLPEAASGPSGPLLGA*ESEVLE
Trigger: CTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAGG...GCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS CCA 90 bp CTCCGTGGCCTGGCACAGAGCTGGCTCCCGCCCCATACCAACCTCTaGTCTGCGGTTTGCGCTGCCCTCCTCCTCTTTCTTCTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: LRGLAQSWLPPHTNL*SAVCAALLLFLLLG
Trigger: CCCGAGGAGAAGAAAGAGGAGGAGGGCAGCGCAAACCGCAGACCAGAGGTTGGTATGGGGCGGGAGCCAGCTCTGTGCCAGGCCACGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556876.1
ENST00000631274.1
CDS-3UTR CAA 90 bp GGGCCTGATTGTTCCCCTCAGCCTTGGACTCCTGCATGGGCTCCGGGAGGGCCTCCTCTCCTTGGCGCCTaGGAGAGCGAGGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GPDCSPQPWTPAWAPGGPPLLGA*ESEVLE
Trigger: CTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAGG...AGGCCCTCCCGGAGCCCATGCAGGAGTCCAAGGCTGAGGGGAACAATCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS GCA 90 bp CCAGCCGCTTCTCAGCCGTCAGCTCCTTGGCCAGCTGGTCCATCTTaGTCCAGCGTTTGGAGTCCTCCCACTCCTTGGAGAGCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: PAASQPSAPWPAGPS*SSVWSPPTPWRAAP
Trigger: AGGAGCGGCTCTCCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGAGAAGCGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS CCA 90 bp CAGCCGTCAGCTCCTTGGCCAGCTGGTCCATCTTGCTCCAGCGTTTaGAGTCCTCCCACTCCTTGGAGAGCCGCTCCTCCTCCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: QPSAPWPAGPSCSSV*SPPTPWRAAPPPAP
Trigger: TGGAGCAGGAGGAGGAGCGGCTCTCCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS CCA 90 bp TCCTGCCCCTCCAGCCGCTTCTCAGCCGTCAGCTCCTTGGCCAGCTaGTCCATCTTGCTCCAGCGTTTGGAGTCCTCCCACTCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SCPSSRFSAVSSLAS*SILLQRLESSHSLE
Trigger: CTCCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGAGAAGCGGCTGGAGGGGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS-3UTR CAA 90 bp TTGGGCAGGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCATCTTGCTCCAGCGTTaGGAGTCCTCCCACTCCTTG +
Preference number: 5 (lower is better)
Translates to: LGRLEAASLPEAASGPSGILLQR*ESSHSL
Trigger: CAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGAT...GCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCCTGCCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS CCA 90 bp GTAGTGCCTGCAGCTGGTGGGCCACTTTCTCCAGCTCTGCTTCAATaGCCGACAGGCTCTCCAGCTCCTGGTCCTCTGGTCTGCGGTTTG +
Preference number: 5 (lower is better)
Translates to: VVPAAGGPLSPALLQ*PTGSPAPGPLVCGL
Trigger: CAAACCGCAGACCAGAGGACCAGGAGCTGGAGAGCCTGTCGGCCATTGAAGCAGAGCTGGAGAAAGTGGCCCACCAGCTGCAGGCACTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp ACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCTGGCTGCTCCCTCTCCTTGGCGCCTaGGAGAGCGAGGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: TSLDDGSSTASFSSAWLLPLLGA*ESEVLE
Trigger: CTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAGG...GAGCAGCCAGGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CAA 90 bp GGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTAGGAGACAAACCCCGGAAGAGGCCTaGCGGGACCACTGCCATCTC +
Preference number: 5 (lower is better)
Translates to: GCPAKDVPGQVGVRSRRQTPEEA*RDHCHL
Trigger: GAGATGGCAGTGGTCCCGCAAGGCCTCTTCCGGGGT...TTGTCTCCTACTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGGACCCAGAAGTTATTGCAGTaGTGCCCAGTGGATAGGATG +
Preference number: 5 (lower is better)
Translates to: GWRLPPYRKQHPGHLARTQKLLQ*CPVDRM
Trigger: CATCCTATCCACTGGGCACAACTGCAATAACTTCTG...GGTCCTGGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TTCTCCATAACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCGCTGGAGGGTGGGTGTaGGTGGCCTCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FSITSLDDGSSTASFSSAAGGWV*VASSSS
Trigger: GGAGGAGGAGGAGGCCACCAACACCCACCCTCCAGC...GGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CAA 90 bp GGCTGGAGGCTGCCTCCCTACCGGAAGCAGCATCCGGGCCATCTGGCCAGGACCAAAGGTCAGAAGTTATaGCAGTTGTGCCCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: GWRLPPYRKQHPGHLARTKGQKL*QLCPVD
Trigger: ATCCACTGGGCACAACTGCAATAACTTCTGACCTTT...GGTCCTGGCCAGATGGCCCGGATGCTGCTTCCGGTAGGGAGGCAGCCTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS CCA 90 bp TCAACGATGCATTTCATCACCTGGGAACACAGTGCAGGGGCAGGTTaGGGCTGGTTTGAGCATGGGGCTCAGTCCCTGGAGGCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: STMHFITWEHSAGAG*GWFEHGAQSLEALG
Trigger: CCCTAGAGCCTCCAGGGACTGAGCCCCATGCTCAAACCAGCCCCAACCTGCCCCTGCACTGTGTTCCCAGGTGATGAAATGCATCGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556098.1
ENST00000629687.1
CDS-3UTR CAA 90 bp TTCTCCATAACATCCTTGGATGATGGCTCTTCCACCGCCTCTTTCAGCTCGGCCAGGGAGCGCAGTGACTaGCCCGGCGCAGAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: FSITSLDDGSSTASFSSARERSD*PGAEQK
Trigger: CTTCTGCTCTGCGCCGGGCAAGTCACTGCGCTCCCT...GGCCGAGCTGAAAGAGGCGGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CAA 90 bp GGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTAGGAGACAAATCTTGCTCCAGCGTTaGGAGTCCTCCCACTCCTTG +
Preference number: 5 (lower is better)
Translates to: GCPAKDVPGQVGVRSRRQILLQR*ESSHSL
Trigger: CAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGAT...TTGTCTCCTACTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGCCAGCTGGTCCATCTaGCTCCAGCGTTTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: FKVVGLPCKGCSRAGRSQASWSI*LQRLES
Trigger: GGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGC...CTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGACCTCTGGTCTGCGGTTaGCGCTGCCCTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGPLVCG*RCPPPL
Trigger: AAGAGGAGGAGGGCAGCGCAAACCGCAGACCAGAGG...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS CCA 90 bp ACAGCCAGAGCCTCCGACCGACCTTTCAGCTCGGCCTGGCTGCTCTaGTTCTCAAGAACCTCTGAGAGTTCATCTTCAAAACCGCTGTGT +
Preference number: 5 (lower is better)
Translates to: TARASDRPFSSAWLL*FSRTSESSSSKPLC
Trigger: ACACAGCGGTTTTGAAGATGAACTCTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGGTCGGTCGGAGGCTCTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334654.4
ENST00000630996.1
CDS CCA 90 bp GTGTCAGCCACTCCAACCACATGGCCAGCAGGTTCCCCTCCAAGGTaGATCATAGTGAGAATGGGGTGTAGGGAATGGTACCTGGTACCT +
Preference number: 5 (lower is better)
Translates to: VSATPTTWPAGSPPR*IIVRMGCREWYLVP
Trigger: AGGTACCAGGTACCATTCCCTACACCCCATTCTCACTATGATCCACCTTGGAGGGGAACCTGCTGGCCATGTGGTTGGAGTGGCTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556098.1
ENST00000629687.1
CDS-3UTR CAA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTGCTGGAGGGTGGGTGTaGGTGGCCTCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCAGGWV*VASSSS
Trigger: GGAGGAGGAGGAGGCCACCAACACCCACCCTCCAGC...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS CCA 90 bp TTGGAAAGTGTGTCGGAGATGACCTCAACGATGCATTTCATCACCTaGGAACACAGTGCAGGGGCAGGTTGGGGCTGGTTTGAGCATGGG +
Preference number: 5 (lower is better)
Translates to: LESVSEMTSTMHFIT*EHSAGAGWGWFEHG
Trigger: CCCATGCTCAAACCAGCCCCAACCTGCCCCTGCACTGTGTTCCCAGGTGATGAAATGCATCGTTGAGGTCATCTCCGACACACTTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556098.1
ENST00000629687.1
CDS-3UTR CAA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTAGGGAGCGCAGTGACTaGCCCGGCGCAGAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCRERSD*PGAEQK
Trigger: CTTCTGCTCTGCGCCGGGCAAGTCACTGCGCTCCCT...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCCAGCTGGTCCATCTaGCTCCAGCGTTTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPASWSI*LQRLES
Trigger: GGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGC...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCCCTCTGGTCTGCGGTTaGCGCTGCCCTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: EKESSMFKVVGLPCKGCSPLVCG*RCPPPL
Trigger: AAGAGGAGGAGGGCAGCGCAAACCGCAGACCAGAGG...GGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTAGGAGACAACGTCAATGTTTAAAGTaGTGGGGCTGCCCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: GCPAKDVPGQVGVRSRRQRQCLK*WGCPAK
Trigger: CTTTGCAGGGCAGCCCCACAACTTTAAACATTGACG...TTGTCTCCTACTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS CCA 90 bp ATGGAAAGGATCCGTTCATCTCCTCGGAGTGTCTCAAAACATTCCTaGCTGACAGGCATGGGGCTGGGCTTGGAAAGTGTGTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: MERIRSSPRSVSKHS*LTGMGLGLESVSEM
Trigger: CATCTCCGACACACTTTCCAAGCCCAGCCCCATGCCTGTCAGCCAGGAATGTTTTGAGACACTCCGAGGAGATGAACGGATCCTTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000553866.1
ENST00000556098.1
ENST00000613166.3
ENST00000627696.1
ENST00000629687.1
ENST00000630996.1
CDS-3UTR CAA 90 bp CAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCTCTCCTTGGCGCCTaGGAGAGCGAGGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: QRRNRQCLKLWGCPAKDVPLLGA*ESEVLE
Trigger: CTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAGG...AACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGCCTCTGGTCTGCGGTTaGCGCTGCCCTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRPLVCG*RCPPPL
Trigger: AAGAGGAGGAGGGCAGCGCAAACCGCAGACCAGAGG...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTAGGAGACAACAGAAGTTATTGCAGTaGTGCCCAGTGGATAGGATG +
Preference number: 5 (lower is better)
Translates to: GCPAKDVPGQVGVRSRRQQKLLQ*CPVDRM
Trigger: CATCCTATCCACTGGGCACAACTGCAATAACTTCTG...TTGTCTCCTACTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGGGCATGGGGCTGGGCTaGGAAAGTGTGTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLGMGLG*ESVSEM
Trigger: CATCTCCGACACACTTTCCAAGCCCAGCCCCATGCC...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TTTCACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGGGCATGGGGCTGGGCTaGGAAAGTGTGTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: FHQKVRSYCSCAQWIGWRGMGLG*ESVSEM
Trigger: CATCTCCGACACACTTTCCAAGCCCAGCCCCATGCC...CCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTATCTTGCTCCAGCGTTaGGAGTCCTCCCACTCCTTG +
Preference number: 5 (lower is better)
Translates to: AACVQRRNRQCLKLWGCPILLQR*ESSHSL
Trigger: CAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGAT...AGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTATGGAACTGTCCCGGTaGTCCTCCTCCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SEKESSMFKVVGLPCKGCMELSR*SSSSSC
Trigger: GCAGGAGGAGGAGGAGGACAACCGGGACAGTTCCAT...ACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGAGTCAGGAGTAGGAGACAAAAAGGTCAGAAGTTATaGCAGTTGTGCCCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: GCPAKDVPGQVGVRSRRQKGQKL*QLCPVD
Trigger: ATCCACTGGGCACAACTGCAATAACTTCTGACCTTT...TTGTCTCCTACTCCTGACTCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAGCTGGAGGGTGGGTGTaGGTGGCCTCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRAGGWV*VASSSS
Trigger: GGAGGAGGAGGAGGCCACCAACACCCACCCTCCAGC...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CAA 90 bp CACCAAAAGGTCAGAAGTTATTGCAGTTGTGCCCAGTGGATAGGATGGAGGAAGATCTTGCTCCAGCGTTaGGAGTCCTCCCACTCCTTG +
Preference number: 5 (lower is better)
Translates to: HQKVRSYCSCAQWIGWRKILLQR*ESSHSL
Trigger: CAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGAT...CTTCCTCCATCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTAGGGAGCGCAGTGACTaGCCCGGCGCAGAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSRERSD*PGAEQK
Trigger: CTTCTGCTCTGCGCCGGGCAAGTCACTGCGCTCCCT...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TCTTTCAGCTCGGCCTGGCTGCTCTGGTTCTCAAGAACCTCTGAGAGTTCATCTTTCTCCATAACATCCTaGGATGATGGCTCTTCCACC +
Preference number: 5 (lower is better)
Translates to: SFSSAWLLWFSRTSESSSFSITS*DDGSST
Trigger: GGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA...AGATGAACTCTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556076.5
ENST00000627311.2
CDS-3UTR CAA 90 bp CAATGTTTAAAGTTGTGGGGCTGCCCTGCAAAGGATGTTCCAGGGCAGGTAGGACAGAAGTTATTGCAGTaGTGCCCAGTGGATAGGATG +
Preference number: 5 (lower is better)
Translates to: QCLKLWGCPAKDVPGQVGQKLLQ*CPVDRM
Trigger: CATCCTATCCACTGGGCACAACTGCAATAACTTCTG...TCCTACCTGCCCTGGAACATCCTTTGCAGGGCAGCCCCACAACTTTAAACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TTAGATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAGGGAGCGCAGTGACTaGCCCGGCGCAGAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: LDKVHTEYVTVRSSQLSPRERSD*PGAEQK
Trigger: CTTCTGCTCTGCGCCGGGCAAGTCACTGCGCTCCCT...TGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTATCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CAA 90 bp TTAGATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAACCCCGGAAGAGGCCTaGCGGGACCACTGCCATCTC +
Preference number: 5 (lower is better)
Translates to: LDKVHTEYVTVRSSQLSPTPEEA*RDHCHL
Trigger: GAGATGGCAGTGGTCCCGCAAGGCCTCTTCCGGGGT...TGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTATCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CAA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAGCCAGCTGGTCCATCTaGCTCCAGCGTTTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRASWSI*LQRLES
Trigger: GGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGC...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp ATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAAGTTCAGCCGTCAGCTCCTaGGCCAGCTGGTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: IQNMLQSGVLSFHQKVRSSAVSS*ASWSIL
Trigger: CAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGA...ACTTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAATCAGCCGTCAGCTCCTaGGCCAGCTGGTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: SYRICYSQEFSAFTKRSESAVSS*ASWSIL
Trigger: CAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGA...TTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGATCAGCCGTCAGCTCCTaGGCCAGCTGGTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: FIQNMLQSGVLSFHQKVRSAVSS*ASWSIL
Trigger: CAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGA...TCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCGTCAATGTTTAAAGTaGTGGGGCTGCCCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLRQCLK*WGCPAK
Trigger: CTTTGCAGGGCAGCCCCACAACTTTAAACATTGACG...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTGGCATGGGGCTGGGCTaGGAAAGTGTGTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGGMGLG*ESVSEM
Trigger: CATCTCCGACACACTTTCCAAGCCCAGCCCCATGCC...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TTAGATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCACCTCTCCTTGGCGCCTaGGAGAGCGAGGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LDKVHTEYVTVRSSQLSPPLLGA*ESEVLE
Trigger: CTCCAAGACCTCGCTCTCCAAGGCGCCAAGGAGAGG...TGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CAA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGTTCTCCATAACATCCTaGGATGATGGCTCTTCCACC +
Preference number: 5 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLFSITS*DDGSST
Trigger: GGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CAA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTTCAGCCGTCAGCTCCTaGGCCAGCTGGTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGSAVSS*ASWSIL
Trigger: CAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGA...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp AAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTATGGAACTGTCCCGGTaGTCCTCCTCCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: KVHTEYVTVRSSQLSPKGMELSR*SSSSSC
Trigger: GCAGGAGGAGGAGGAGGACAACCGGGACAGTTCCAT...ACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGCAGAAGTTATTGCAGTaGTGCCCAGTGGATAGGATG +
Preference number: 5 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLQKLLQ*CPVDRM
Trigger: CATCCTATCCACTGGGCACAACTGCAATAACTTCTG...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS GCA 90 bp TTTTGTCTTTGGGAGTCCATGATCCCTGGCTCAGGGACACAGCTCTaGTTTCTTAGCCAGACAGTGATAGCAATGATAATAGAAAACCCT +
Preference number: 5 (lower is better)
Translates to: FCLWESMIPGSGTQL*FLSQTVIAMIIENP
Trigger: AGGGTTTTCTATTATCATTGCTATCACTGTCTGGCTAAGAAAGCAGAGCTGTGTCCCTGAGCCAGGGATCATGGACTCCCAAAGACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556098.1
ENST00000629687.1
CDS-3UTR CAA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGCCAGCTGGTCCATCTaGCTCCAGCGTTTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKASWSI*LQRLES
Trigger: GGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGC...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TTAGATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAATGGAACTGTCCCGGTaGTCCTCCTCCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LDKVHTEYVTVRSSQLSPMELSR*SSSSSC
Trigger: GCAGGAGGAGGAGGAGGACAACCGGGACAGTTCCAT...TGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CAA 90 bp GAAAGCTGCCTGTGTTCAGAGAAGGAATCGTCAATGTTTAAAGTTGTGGGGCTGAAAGGTCAGAAGTTATaGCAGTTGTGCCCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: ESCLCSEKESSMFKVVGLKGQKL*QLCPVD
Trigger: ATCCACTGGGCACAACTGCAATAACTTCTGACCTTT...CAGCCCCACAACTTTAAACATTGACGATTCCTTCTCTGAACACAGGCAGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGGTCAGAATTCTCCATAACATCCTaGGATGATGGCTCTTCCACC +
Preference number: 5 (lower is better)
Translates to: SYRICYSQEFSAFTKRSEFSITS*DDGSST
Trigger: GGTGGAAGAGCCATCATCCAAGGATGTTATGGAGAA...TTCTGACCTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS-3UTR CAA 90 bp ATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCAAAAGCGTCAATGTTTAAAGTaGTGGGGCTGCCCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: IKFIQNMLQSGVLSFHQKRQCLK*WGCPAK
Trigger: CTTTGCAGGGCAGCCCCACAACTTTAAACATTGACG...CTTTTGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS-3UTR CAA 90 bp TTAGATAAAGTTCATACAGAATATGTTACAGTCAGGAGTTCTCAGCTTTCACCACGTCAATGTTTAAAGTaGTGGGGCTGCCCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LDKVHTEYVTVRSSQLSPRQCLK*WGCPAK
Trigger: CTTTGCAGGGCAGCCCCACAACTTTAAACATTGACG...TGGTGAAAGCTGAGAACTCCTGACTGTAACATATTCTGTATGAACTTTATCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS GCA 72 bp GCACCGGCGCGGGGCTGGGGGCGCAGTGCCTCGGCGTaGGTCCGTCTGTCGGTCGATCCTCCCGCAAGCTCC +
Preference number: 6 (lower is better)
Translates to: APARGWGRSASA*VRLSVDPPASS
Trigger: GGAGCTTGCGGGAGGATCGACCGACAGACGGACGCACGCCGAGGCACTGCGCCCCCAGCCCCGCGCCGGTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556076.5
ENST00000613166.3
ENST00000627311.2
ENST00000630996.1
CDS CCA 72 bp GGGCAGGCCCGCCTCAAGGCTGTCCTCCCGGGAGGATaGCCTCCAGCCTCGTCGCAGCTGCGGCCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: GQARLKAVLPGG*PPASSQLRPRA
Trigger: GGCCCTGGGCCGCAGCTGCGACGAGGCTGGAGGCCATCCTCCCGGGAGGACAGCCTTGAGGCGGGCCTGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS GCA 72 bp CGTCCGTCTGTCGGTCGATCCTCCCGCAAGCTCCCCTaGACGGGGCTCGAGCACTGCAGTGGCAGGAGCGGT +
Preference number: 6 (lower is better)
Translates to: RPSVGRSSRKLP*TGLEHCSGRSG
Trigger: ACCGCTCCTGCCACTGCAGTGCTCGAGCCCCGTGCAGGGGAGCTTGCGGGAGGATCGACCGACAGACGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216492.10
ENST00000613166.3
CDS GCA 72 bp CCCTGCCAGCCGGTGTCTCAGCCCCGCCGTAGTGCCTaGAGCTGGTGGGCCACTTTCTCCAGCTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: PCQPVSQPRRSA*SWWATFSSSAS
Trigger: TGAAGCAGAGCTGGAGAAAGTGGCCCACCAGCTGCAGGCACTACGGCGGGGCTGAGACACCGGCTGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS CCA 72 bp CAGCCGGTGTCTCAGCCCCGCCGTAGTGCCTGCAGCTaGTGGGCCACTTTCTCCAGCTCTGCTTCAATGGCC +
Preference number: 6 (lower is better)
Translates to: QPVSQPRRSACS*WATFSSSASMA
Trigger: GGCCATTGAAGCAGAGCTGGAGAAAGTGGCCCACCAGCTGCAGGCACTACGGCGGGGCTGAGACACCGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS CCA 72 bp CCTGCCCCTCCAGCCGCTTCTCAGCCGTCAGCTCCTTaGCCAGCTGGTCCATCTTGCTCCAGCGTTTGGAGT +
Preference number: 6 (lower is better)
Translates to: PAPPAASQPSAP*PAGPSCSSVWS
Trigger: ACTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGAGAAGCGGCTGGAGGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS CAA 72 bp TCCTGCCCCTCCAGCCGCTTCTCAGCCGTCAGCTCCTaGGCCAGCTGGTCCATCTTGCTCCAGCGTTTGGAG +
Preference number: 6 (lower is better)
Translates to: SCPSSRFSAVSS*ASWSILLQRLE
Trigger: CTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGAGAAGCGGCTGGAGGGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS CAA 90 bp TCAGCCGTCAGCTCCTTGGCCAGCTGGTCCATCTTGCTCCAGCGTTaGGAGTCCTCCCACTCCTTGGAGAGCCGCTCCTCCTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SAVSSLASWSILLQR*ESSHSLESRSSSCS
Trigger: GGAGCAGGAGGAGGAGCGGCTCTCCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS CAA 90 bp TCCAGCCGCTTCTCAGCCGTCAGCTCCTTGGCCAGCTGGTCCATCTaGCTCCAGCGTTTGGAGTCCTCCCACTCCTTGGAGAGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: SSRFSAVSSLASWSI*LQRLESSHSLESRS
Trigger: GGAGCGGCTCTCCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGAGAAGCGGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS GCA 72 bp TCAGACCCACCGCATGGTTTTTCCAGGGCACCCTACTaGCTTCTGGACAACGTCCCCACTCAGCGCCTCCCC +
Preference number: 6 (lower is better)
Translates to: SDPPHGFSRAPY*LLDNVPTQRLP
Trigger: GGGGAGGCGCTGAGTGGGGACGTTGTCCAGAAGGCAGTAGGGTGCCCTGGAAAAACCATGCGGTGGGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556876.1
ENST00000631274.1
CDS CCA 72 bp GCTCCTTGGCCAGCTGGTCCATCTTGCTCCAGCGTTTaGAGTCCTCCCACTCCTTGGAGAGCCGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: APWPAGPSCSSV*SPPTPWRAAPP
Trigger: AGGAGGAGCGGCTCTCCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS CCA 72 bp TCCAGCCGCTTCTCAGCCGTCAGCTCCTTGGCCAGCTaGTCCATCTTGCTCCAGCGTTTGGAGTCCTCCCAC +
Preference number: 6 (lower is better)
Translates to: SSRFSAVSSLAS*SILLQRLESSH
Trigger: GTGGGAGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGAGAAGCGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS CCA 72 bp GCAGCTGGTGGGCCACTTTCTCCAGCTCTGCTTCAATaGCCGACAGGCTCTCCAGCTCCTGGTCCTCTGGTC +
Preference number: 6 (lower is better)
Translates to: AAGGPLSPALLQ*PTGSPAPGPLV
Trigger: GACCAGAGGACCAGGAGCTGGAGAGCCTGTCGGCCATTGAAGCAGAGCTGGAGAAAGTGGCCCACCAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS CCA 72 bp CTGGCACAGAGCTGGCTCCCGCCCCATACCAACCTCTaGTCTGCGGTTTGCGCTGCCCTCCTCCTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: LAQSWLPPHTNL*SAVCAALLLFL
Trigger: AAGAAAGAGGAGGAGGGCAGCGCAAACCGCAGACCAGAGGTTGGTATGGGGCGGGAGCCAGCTCTGTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556876.1
ENST00000631274.1
CDS CAA 72 bp AGCTCCTTGGCCAGCTGGTCCATCTTGCTCCAGCGTTaGGAGTCCTCCCACTCCTTGGAGAGCCGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSLASWSILLQR*ESSHSLESRSS
Trigger: GGAGGAGCGGCTCTCCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS GCA 72 bp TCTCAGCCGTCAGCTCCTTGGCCAGCTGGTCCATCTTaGTCCAGCGTTTGGAGTCCTCCCACTCCTTGGAGA +
Preference number: 6 (lower is better)
Translates to: SQPSAPWPAGPS*SSVWSPPTPWR
Trigger: TCTCCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS CCA 72 bp CATTTCATCACCTGGGAACACAGTGCAGGGGCAGGTTaGGGCTGGTTTGAGCATGGGGCTCAGTCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: HFITWEHSAGAG*GWFEHGAQSLE
Trigger: CTCCAGGGACTGAGCCCCATGCTCAAACCAGCCCCAACCTGCCCCTGCACTGTGTTCCCAGGTGATGAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556098.1
ENST00000629687.1
CDS CAA 72 bp TTCTCAGCCGTCAGCTCCTTGGCCAGCTGGTCCATCTaGCTCCAGCGTTTGGAGTCCTCCCACTCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: FSAVSSLASWSI*LQRLESSHSLE
Trigger: CTCCAAGGAGTGGGAGGACTCCAAACGCTGGAGCAAGATGGACCAGCTGGCCAAGGAGCTGACGGCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000556876.1
ENST00000613166.3
ENST00000630996.1
ENST00000631274.1
CDS TCA 72 bp CAGGCATGGGGCTGGGCTTGGAAAGTGTGTCGGAGATaGCCTCAACGATGCATTTCATCACCTTGCCCGGCG +
Preference number: 6 (lower is better)
Translates to: QAWGWAWKVCRR*PQRCISSPCPA
Trigger: CGCCGGGCAAGGTGATGAAATGCATCGTTGAGGTCATCTCCGACACACTTTCCAAGCCCAGCCCCATGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553866.1
ENST00000627696.1
CDS CCA 72 bp ACAGCCAGAGCCTCCGACCGACCTTTCAGCTCGGCCTaGCTGCTCTGGTTCTCAAGAACCTCTGAGAGTTCA +
Preference number: 6 (lower is better)
Translates to: TARASDRPFSSA*LLWFSRTSESS
Trigger: TGAACTCTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGGTCGGTCGGAGGCTCTGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334654.4
ENST00000630996.1
CDS GCA 72 bp CCAGAGCCTCCGACCGACCTTTCAGCTCGGCCTGGCTaGTCTGGTTCTCAAGAACCTCTGAGAGTTCATCTT +
Preference number: 6 (lower is better)
Translates to: PEPPTDLSARPG*SGSQEPLRVHL
Trigger: AAGATGAACTCTCAGAGGTTCTTGAGAACCAGAGCAGCCAGGCCGAGCTGAAAGGTCGGTCGGAGGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334654.4
ENST00000630996.1
CDS TCA 72 bp CAGGCATGGGGCTGGGCTTGGAAAGTGTGTCGGAGATaGCCTCAACGATGCATTTCATCACCTCGGTATCCC +
Preference number: 6 (lower is better)
Translates to: QAWGWAWKVCRR*PQRCISSPRYP
Trigger: GGGATACCGAGGTGATGAAATGCATCGTTGAGGTCATCTCCGACACACTTTCCAAGCCCAGCCCCATGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000613166.3
ENST00000630996.1
CDS TCA 72 bp GTTCATCTCCTCGGAGTGTCTCAAAACATTCCTGGCTaGCAGGCATGGGGCTGGGCTTGGAAAGTGTGTCGG +
Preference number: 6 (lower is better)
Translates to: VHLLGVSQNIPG*QAWGWAWKVCR
Trigger: CCGACACACTTTCCAAGCCCAGCCCCATGCCTGTCAGCCAGGAATGTTTTGAGACACTCCGAGGAGATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000553866.1
ENST00000556098.1
ENST00000613166.3
ENST00000627696.1
ENST00000629687.1
ENST00000630996.1
CDS CCA 72 bp CACAGTGCTTACCATGTGTCAGCCACTCCAACCACATaGCCAGCAGGTTCCCCTCCAAGGTGGATCATAGTG +
Preference number: 6 (lower is better)
Translates to: HSAYHVSATPTT*PAGSPPRWIIV
Trigger: CACTATGATCCACCTTGGAGGGGAACCTGCTGGCCATGTGGTTGGAGTGGCTGACACATGGTAAGCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556098.1
ENST00000629687.1
CDS CCA 72 bp GTGTCGGAGATGACCTCAACGATGCATTTCATCACCTaGGAACACAGTGCAGGGGCAGGTTGGGGCTGGTTT +
Preference number: 6 (lower is better)
Translates to: VSEMTSTMHFIT*EHSAGAGWGWF
Trigger: AAACCAGCCCCAACCTGCCCCTGCACTGTGTTCCCAGGTGATGAAATGCATCGTTGAGGTCATCTCCGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556098.1
ENST00000629687.1
CDS TCA 72 bp CAGGCATGGGGCTGGGCTTGGAAAGTGTGTCGGAGATaGCCTCAACGATGCATTTCATCACCTGGGAACACA +
Preference number: 6 (lower is better)
Translates to: QAWGWAWKVCRR*PQRCISSPGNT
Trigger: TGTGTTCCCAGGTGATGAAATGCATCGTTGAGGTCATCTCCGACACACTTTCCAAGCCCAGCCCCATGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556098.1
ENST00000629687.1
CDS CCA 72 bp ATCCGTTCATCTCCTCGGAGTGTCTCAAAACATTCCTaGCTGACAGGCATGGGGCTGGGCTTGGAAAGTGTG +
Preference number: 6 (lower is better)
Translates to: IRSSPRSVSKHS*LTGMGLGLESV
Trigger: CACACTTTCCAAGCCCAGCCCCATGCCTGTCAGCCAGGAATGTTTTGAGACACTCCGAGGAGATGAACGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000553866.1
ENST00000556098.1
ENST00000613166.3
ENST00000627696.1
ENST00000629687.1
ENST00000630996.1
CDS CCA 72 bp ACTCCAACCACATGGCCAGCAGGTTCCCCTCCAAGGTaGATCATAGTGAGAATGGGGTGTAGGGAATGGTAC +
Preference number: 6 (lower is better)
Translates to: TPTTWPAGSPPR*IIVRMGCREWY
Trigger: GTACCATTCCCTACACCCCATTCTCACTATGATCCACCTTGGAGGGGAACCTGCTGGCCATGTGGTTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556098.1
ENST00000629687.1
CDS CAA 90 bp CGGAGTGTCTCAAAACATTCCTGGCTGACAGGCATGGGGCTGGGCTaGGAAAGTGTGTCGGAGATGACCTCAACGATGCATTTCATCACC +
Preference number: 6 (lower is better)
Translates to: RSVSKHSWLTGMGLG*ESVSEMTSTMHFIT
Trigger: GGTGATGAAATGCATCGTTGAGGTCATCTCCGACACACTTTCCAAGCCCAGCCCCATGCCTGTCAGCCAGGAATGTTTTGAGACACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216492.10
ENST00000334654.4
ENST00000553866.1
ENST00000556098.1
ENST00000613166.3
ENST00000627696.1
ENST00000629687.1
ENST00000630996.1
CDS CCA 72 bp CCAAGGTGGATCATAGTGAGAATGGGGTGTAGGGAATaGTACCTGGTACCTTCTCATCCCCAAGTGCTATTT +
Preference number: 6 (lower is better)
Translates to: PRWIIVRMGCRE*YLVPSHPQVLF
Trigger: AAATAGCACTTGGGGATGAGAAGGTACCAGGTACCATTCCCTACACCCCATTCTCACTATGATCCACCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556098.1
ENST00000629687.1