RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHFR (Homo sapiens)

Ensembl gene IDs: ENSG00000072609

Ensembl transcript IDs: ENST00000266880.11, ENST00000315585.11, ENST00000432561.6, ENST00000443047.6, ENST00000450056.7, ENST00000499045.2, ENST00000502279.2, ENST00000511001.2, ENST00000535181.5, ENST00000535527.5, ENST00000535897.1, ENST00000536196.1, ENST00000536843.5, ENST00000536932.5, ENST00000537551.5, ENST00000540537.5, ENST00000540963.1, ENST00000541341.5, ENST00000541817.5, ENST00000542714.5, ENST00000544093.5, ENST00000544268.5, ENST00000545046.5

Found 1301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGGGCACCAGGGAGCACAGAGGGAGCCGCAGATGAGGAGTGCGTaGGGAGACGGTCTGTGGGGCCAGCGGGCAGCTGCAGCCCTGCCC +
Preference number: 1 (lower is better)
Translates to: EGHQGAQREPQMRSA*GDGLWGQRAAAALP
Trigger: GGGCAGGGCTGCAGCTGCCCGCTGGCCCCACAGACCGTCTCCCCACGCACTCCTCATCTGCGGCTCCCTCTGTGCTCCCTGGTGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp TCCGTCCTGCTGCTGGTCAGCGCGCGGATCTGCAGGGCTAGGCTGTaGTCTGCATGCGGCCCTCCGTCCTCAGGGAGGCAAGACCCGGCT +
Preference number: 1 (lower is better)
Translates to: SVLLLVSARICRARL*SACGPPSSGRQDPA
Trigger: AGCCGGGTCTTGCCTCCCTGAGGACGGAGGGCCGCATGCAGAGCACAGCCTAGCCCTGCAGATCCGCGCGCTGACCAGCAGCAGGACGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp GCACAGAGGGAGCCGCAGATGAGGAGTGCGTGGGGAGACGGTCTGTaGGGCCAGCGGGCAGCTGCAGCCCTGCCCTGGGTTTGTCCCAAG +
Preference number: 1 (lower is better)
Translates to: AQREPQMRSAWGDGL*GQRAAAALPWVCPK
Trigger: CTTGGGACAAACCCAGGGCAGGGCTGCAGCTGCCCGCTGGCCCCACAGACCGTCTCCCCACGCACTCCTCATCTGCGGCTCCCTCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp GGCGTTTCTGGAGGTGGCTCCCCCGAAGATCACCCGGCTCCGTCCTaGTGCTGGTCAGCGCGCGGATCTGCAGGGCTAGGCTGTGCTCTG +
Preference number: 1 (lower is better)
Translates to: GVSGGGSPEDHPAPS*CWSARGSAGLGCAL
Trigger: CAGAGCACAGCCTAGCCCTGCAGATCCGCGCGCTGACCAGCAGCAGGACGGAGCCGGGTGATCTTCGGGGGAGCCACCTCCAGAAACGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp TCTGGAGGTGGCTCCCCCGAAGATCACCCGGCTCCGTCCTGCTGCTaGTCAGCGCGCGGATCTGCAGGGCTAGGCTGTGCTCTGCATGCG +
Preference number: 1 (lower is better)
Translates to: SGGGSPEDHPAPSCC*SARGSAGLGCALHA
Trigger: CGCATGCAGAGCACAGCCTAGCCCTGCAGATCCGCGCGCTGACCAGCAGCAGGACGGAGCCGGGTGATCTTCGGGGGAGCCACCTCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp TCAGGGCCAGCATTGCTCCACTCTCCCAGCCTGCCAGCCCGAAGCTaGGGGGCTGTCACCAGGAAACCCTTGCTGGCGGAAGCCCCTTCC +
Preference number: 1 (lower is better)
Translates to: SGPALLHSPSLPARS*GAVTRKPLLAEAPS
Trigger: GGAAGGGGCTTCCGCCAGCAAGGGTTTCCTGGTGACAGCCCCCCAGCTTCGGGCTGGCAGGCTGGGAGAGTGGAGCAATGCTGGCCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp TCAGAAGGCGCAGGAGCTAGCGTGCATGCCAAAACGGAGCCCACGTaGAGGCAGAGGGCGGGCACGGCCGCGGGGACAGCGTTCTGGTTT +
Preference number: 1 (lower is better)
Translates to: SEGAGASVHAKTEPT*RQRAGTAAGTAFWF
Trigger: AAACCAGAACGCTGTCCCCGCGGCCGTGCCCGCCCTCTGCCTCCACGTGGGCTCCGTTTTGGCATGCACGCTAGCTCCTGCGCCTTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 90 bp ACTCCTGGGGTTGGGCCTGAGCTACAGGGAGGCCATGCCATCTTCTaGCAGTGGAGAGGGCAGGTCTGCCGGGCGTACGTGGTGGGCCTG +
Preference number: 1 (lower is better)
Translates to: TPGVGPELQGGHAIF*QWRGQVCRAYVVGL
Trigger: CAGGCCCACCACGTACGCCCGGCAGACCTGCCCTCTCCACTGTCAGAAGATGGCATGGCCTCCCTGTAGCTCAGGCCCAACCCCAGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp GGCCCTCCGTCCTCAGGGAGGCAAGACCCGGCTTCTCTACACGGCTaGAGCCGCCCTCAGAAGGCGCAGGAGCTAGCGTGCATGCCAAAA +
Preference number: 1 (lower is better)
Translates to: GPPSSGRQDPASLHG*SRPQKAQELACMPK
Trigger: TTTTGGCATGCACGCTAGCTCCTGCGCCTTCTGAGGGCGGCTGCAGCCGTGTAGAGAAGCCGGGTCTTGCCTCCCTGAGGACGGAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp GTTTCTGGAGGTGGCTCCCCCGAAGATCACCCGGCTCCGTCCTGCTaGTGGTCAGCGCGCGGATCTGCAGGGCTAGGCTGTGCTCTGCAT +
Preference number: 1 (lower is better)
Translates to: VSGGGSPEDHPAPSC*WSARGSAGLGCALH
Trigger: ATGCAGAGCACAGCCTAGCCCTGCAGATCCGCGCGCTGACCAGCAGCAGGACGGAGCCGGGTGATCTTCGGGGGAGCCACCTCCAGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp CCCACGTGGAGGCAGAGGGCGGGCACGGCCGCGGGGACAGCGTTCTaGTTTCCCCATCAAGCCAGGCTGGAGGGACGATCTACTTTCCTA +
Preference number: 1 (lower is better)
Translates to: PTWRQRAGTAAGTAF*FPHQARLEGRSTFL
Trigger: TAGGAAAGTAGATCGTCCCTCCAGCCTGGCTTGATGGGGAAACCAGAACGCTGTCCCCGCGGCCGTGCCCGCCCTCTGCCTCCACGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp GCAGTGGGATCTGCAGCAGCACCAGGCTGTCCTCCAGAAAGCCTGTaGACGACCCACGCAGCCACCCCACAAGGAGAGCAGGGCTCCAAA +
Preference number: 1 (lower is better)
Translates to: AVGSAAAPGCPPESL*TTHAATPQGEQGSK
Trigger: TTTGGAGCCCTGCTCTCCTTGTGGGGTGGCTGCGTGGGTCGTCCACAGGCTTTCTGGAGGACAGCCTGGTGCTGCTGCAGATCCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 90 bp TGGGGCACTGAGGACAGCCAGCAGGATGACTCCTGGGGTTGGGCCTaGGCTACAGGGAGGCCATGCCATCTTCTGACAGTGGAGAGGGCA +
Preference number: 1 (lower is better)
Translates to: WGTEDSQQDDSWGWA*ATGRPCHLLTVERA
Trigger: TGCCCTCTCCACTGTCAGAAGATGGCATGGCCTCCCTGTAGCTCAGGCCCAACCCCAGGAGTCATCCTGCTGGCTGTCCTCAGTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp CTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCTCACTaGGGTGGACGGGTTCACCTAGAACCTGAGGCCCCCTTCCCTGGC +
Preference number: 1 (lower is better)
Translates to: LQSEAMTEAIPERPH*GGRVHLEPEAPFPG
Trigger: GCCAGGGAAGGGGGCCTCAGGTTCTAGGTGAACCCGTCCACCCCAGTGAGGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp TTGTCCCAAGGCTGGGCCAAGGAGCCAGGAAGAAGCAGTGGGATCTaGAGCAGCACCAGGCTGTCCTCCAGAAAGCCTGTGGACGACCCA +
Preference number: 1 (lower is better)
Translates to: LSQGWAKEPGRSSGI*SSTRLSSRKPVDDP
Trigger: TGGGTCGTCCACAGGCTTTCTGGAGGACAGCCTGGTGCTGCTGCAGATCCCACTGCTTCTTCCTGGCTCCTTGGCCCAGCCTTGGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp GTTTTGATCCAGCGGCCCAAGTGGACCCACATTCAAGGCCAGCACTaGGCAGGGCGGGTCTCACAAATGCATGCTCCCAGCACAGCGCAC +
Preference number: 1 (lower is better)
Translates to: VLIQRPKWTHIQGQH*AGRVSQMHAPSTAH
Trigger: GTGCGCTGTGCTGGGAGCATGCATTTGTGAGACCCGCCCTGCCCAGTGCTGGCCTTGAATGTGGGTCCACTTGGGCCGCTGGATCAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp TGTTTAAGCCGCCTGTTCTGCGGCGTTTTGATCCAGCGGCCCAAGTaGACCCACATTCAAGGCCAGCACTGGGCAGGGCGGGTCTCACAA +
Preference number: 1 (lower is better)
Translates to: CLSRLFCGVLIQRPK*THIQGQHWAGRVSQ
Trigger: TTGTGAGACCCGCCCTGCCCAGTGCTGGCCTTGAATGTGGGTCCACTTGGGCCGCTGGATCAAAACGCCGCAGAACAGGCGGCTTAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp GCTCGGGGCCGCGGTCACTCACCGGTTAGCAAGGAGCGACTAACTTaGCGGCCACGTCGAGGGTTAGCAGTTTTGGACATTGGAAGGTTT +
Preference number: 1 (lower is better)
Translates to: ARGRGHSPVSKERLT*RPRRGLAVLDIGRF
Trigger: AAACCTTCCAATGTCCAAAACTGCTAACCCTCGACGTGGCCGCCAAGTTAGTCGCTCCTTGCTAACCGGTGAGTGACCGCGGCCCCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
3UTR CCA 90 bp GCAACATCATCACAGGCTCAAGTGATCGGATACGGGTATCTGTGGTaGCGGGACGGGGACATGGCTCAGCCCACCACGGAGTGTCAATGG +
Preference number: 1 (lower is better)
Translates to: ATSSQAQVIGYGYLW*RDGDMAQPTTECQW
Trigger: CCATTGACACTCCGTGGTGGGCTGAGCCATGTCCCCGTCCCGCCACCACAGATACCCGTATCCGATCACTTGAGCCTGTGATGATGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp CCACAAGGAGAGCAGGGCTCCAAAACCACCACAGCCGGTCAGTTTTaGTGGGTGGGATGGCTGGGTCTTGAGGACGAGGAAGTACAGAAG +
Preference number: 1 (lower is better)
Translates to: PQGEQGSKTTTAGQF*WVGWLGLEDEEVQK
Trigger: CTTCTGTACTTCCTCGTCCTCAAGACCCAGCCATCCCACCCAGCAAAACTGACCGGCTGTGGTGGTTTTGGAGCCCTGCTCTCCTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp CAAGGAGAGCAGGGCTCCAAAACCACCACAGCCGGTCAGTTTTGCTaGGTGGGATGGCTGGGTCTTGAGGACGAGGAAGTACAGAAGCTC +
Preference number: 1 (lower is better)
Translates to: QGEQGSKTTTAGQFC*VGWLGLEDEEVQKL
Trigger: GAGCTTCTGTACTTCCTCGTCCTCAAGACCCAGCCATCCCACCCAGCAAAACTGACCGGCTGTGGTGGTTTTGGAGCCCTGCTCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp TGCTTGAATAATGGCTGTCTACCAGTTACCAGCACTAGGCGTTTCTaGAGGTGGCTCCCCCGAAGATCACCCGGCTCCGTCCTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: CLNNGCLPVTSTRRF*RWLPRRSPGSVLLL
Trigger: CAGCAGCAGGACGGAGCCGGGTGATCTTCGGGGGAGCCACCTCCAGAAACGCCTAGTGCTGGTAACTGGTAGACAGCCATTATTCAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp AAGGCAACATCATCACAGGCTCAAGTGATCGGATACGGGTATCTGTaGTGGCGGGACGGGGACATGGCTCAGCCCACCACGGAGTGTCAA +
Preference number: 1 (lower is better)
Translates to: KATSSQAQVIGYGYL*WRDGDMAQPTTECQ
Trigger: TTGACACTCCGTGGTGGGCTGAGCCATGTCCCCGTCCCGCCACCACAGATACCCGTATCCGATCACTTGAGCCTGTGATGATGTTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 90 bp GGCTCTCTGAGCTGCCTGCCCTTCCTGGACAGGTGCAGCTGGTCCTaGGGAAAGACCAGCATCCTCTACAGGGCAAGTGTTCTTGTTTCT +
Preference number: 1 (lower is better)
Translates to: GSLSCLPFLDRCSWS*GKTSILYRASVLVS
Trigger: AGAAACAAGAACACTTGCCCTGTAGAGGATGCTGGTCTTTCCTCAGGACCAGCTGCACCTGTCCAGGAAGGGCAGGCAGCTCAGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 90 bp CCACCATCTAGACTCACCGCCTCAGAAGGAGACAACCGTGAAAAGTaGGCGACAGAGGAAGGGGCGCCTGTTTGTGCCGCGGGAAAGATT +
Preference number: 1 (lower is better)
Translates to: PPSRLTASEGDNREK*ATEEGAPVCAAGKI
Trigger: AATCTTTCCCGCGGCACAAACAGGCGCCCCTTCCTCTGTCGCTCACTTTTCACGGTTGTCTCCTTCTGAGGCGGTGAGTCTAGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp GGGAGGAGGGTTGGCCTGAATCCCTCAGTCTGTTTTAAGCCAATCTaGCCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCAT +
Preference number: 1 (lower is better)
Translates to: GRRVGLNPSVCFKPI*PDFLAAVRSYDRGH
Trigger: ATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGGGCAGATTGGCTTAAAACAGACTGAGGGATTCAGGCCAACCCTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp GGACGGCTCATCAGCTCATCAGACCTTCACCGTTCAGTAGCCAACTaGTCAGTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGA +
Preference number: 1 (lower is better)
Translates to: GRLISSSDLHRSVAN*SVISRCCPGAKHFR
Trigger: TCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCACTGACCAGTTGGCTACTGAACGGTGAAGGTCTGATGAGCTGATGAGCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 90 bp GTCCATTCCTTCCACAGACATGCACGACCAAGTGTCTGCTCTGTGTaGGGAACTTTAAGACCCCACCATCTAGACTCACCGCCTCAGAAG +
Preference number: 1 (lower is better)
Translates to: VHSFHRHARPSVCSV*GTLRPHHLDSPPQK
Trigger: CTTCTGAGGCGGTGAGTCTAGATGGTGGGGTCTTAAAGTTCCTCACACAGAGCAGACACTTGGTCGTGCATGTCTGTGGAAGGAATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 90 bp TCCTCGCAGGAAGAGATTAGGGCACAAACACGCATGAAGAGAAGATaGCGTGAGAACTCAAGGAGATGCTGCCCACGAGCCAAGGAGACA +
Preference number: 1 (lower is better)
Translates to: SSQEEIRAQTRMKRR*RENSRRCCPRAKET
Trigger: TGTCTCCTTGGCTCGTGGGCAGCATCTCCTTGAGTTCTCACGTCATCTTCTCTTCATGCGTGTTTGTGCCCTAATCTCTTCCTGCGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp CACCCTTGCACAAACTCAGGGTCTCTGCATTGTGGCTTCTTCTGGTaGTCAGCTGAAGACAAAGCCTCCACACTGGATGAACAGGTTGTG +
Preference number: 1 (lower is better)
Translates to: HPCTNSGSLHCGFFW*SAEDKASTLDEQVV
Trigger: CACAACCTGTTCATCCAGTGTGGAGGCTTTGTCTTCAGCTGAGCACCAGAAGAAGCCACAATGCAGAGACCCTGAGTTTGTGCAAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp GACCTTCACCGTTCAGTAGCCAACTGGTCAGTGATCAGTAGATGCTaGCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTGGGCAG +
Preference number: 1 (lower is better)
Translates to: DLHRSVANWSVISRC*PGAKHFRQINNSGQ
Trigger: CTGCCCACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCACTGACCAGTTGGCTACTGAACGGTGAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp ACTGGCCTTCAACATTCTCTCCTGAGTCCATTCCTTCCACAGACATaGACGACCAAGTGTCTGCTCTGTGTGAGGAACTTTAAGACCCCA +
Preference number: 1 (lower is better)
Translates to: TGLQHSLLSPFLPQT*TTKCLLCVRNFKTP
Trigger: TGGGGTCTTAAAGTTCCTCACACAGAGCAGACACTTGGTCGTGCATGTCTGTGGAAGGAATGGACTCAGGAGAGAATGTTGAAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 90 bp GCAAGTGTTCTTGTTTCTACTTTTTGGAGATGGGAAGGGGAAGAGTaGGTATCAACCGATCTCTCTAAGACACAGACGCAGGGTAGCCCC +
Preference number: 1 (lower is better)
Translates to: ASVLVSTFWRWEGEE*VSTDLSKTQTQGSP
Trigger: GGGGCTACCCTGCGTCTGTGTCTTAGAGAGATCGGTTGATACTCACTCTTCCCCTTCCCATCTCCAAAAAGTAGAAACAAGAACACTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 90 bp CCCCTCCACCCAGCCCGACAACCACTCAGTCACCTTCTGTCTTTATaGATGTGCCTCTTCTGGACATTTCATAGAAATGGGATCATATCG +
Preference number: 1 (lower is better)
Translates to: PLHPARQPLSHLLSL*MCLFWTFHRNGIIS
Trigger: CGATATGATCCCATTTCTATGAAATGTCCAGAAGAGGCACATTCATAAAGACAGAAGGTGACTGAGTGGTTGTCGGGCTGGGTGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp TCAGACCTTCACCGTTCAGTAGCCAACTGGTCAGTGATCAGTAGATaGTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTGGG +
Preference number: 1 (lower is better)
Translates to: SDLHRSVANWSVISR*CPGAKHFRQINNSG
Trigger: CCCACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCACTGACCAGTTGGCTACTGAACGGTGAAGGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp ATATGTTCAAGCCCTAAATCCCAGGACCTCAGAGGTGACTGTATCTaGAGACATGGAACACGTCATGAATTTGGGTGTCATGCCTGCACG +
Preference number: 1 (lower is better)
Translates to: ICSSPKSQDLRGDCI*RHGTRHEFGCHACT
Trigger: CGTGCAGGCATGACACCCAAATTCATGACGTGTTCCATGTCTGCAGATACAGTCACCTCTGAGGTCCTGGGATTTAGGGCTTGAACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp GTGGAGGCAGGGGTCATACATGCTGGGCCTTCAAGGGCCATGATATaGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGCTT +
Preference number: 1 (lower is better)
Translates to: VEAGVIHAGPSRAMI*LSLLCNKPPQMQWL
Trigger: AAGCCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCTTGAAGGCCCAGCATGTATGACCCCTGCCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp CCAACACGAGAGCGGAGGAGCAAACGCGGCTCATTTATTAGAATATaGAAAAGAGAGGACTTTCCTCCACAAATACAGATTGCTGCTTCT +
Preference number: 1 (lower is better)
Translates to: PTRERRSKRGSFIRI*KREDFPPQIQIAAS
Trigger: AGAAGCAGCAATCTGTATTTGTGGAGGAAAGTCCTCTCTTTTGCATATTCTAATAAATGAGCCGCGTTTGCTCCTCCGCTCTCGTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp CCCAAATGCAGTGGCTTAAACAACTACTTATTTCTCATGATTATATaGTGGCTGCCTGGTGCAGCACTGTGCTGGTGTTTAACAACCTTC +
Preference number: 1 (lower is better)
Translates to: PKCSGLNNYLFLMII*WLPGAALCWCLTTF
Trigger: GAAGGTTGTTAAACACCAGCACAGTGCTGCACCAGGCAGCCAGCATATAATCATGAGAAATAAGTAGTTGTTTAAGCCACTGCATTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp TGGCTTAAACAACTACTTATTTCTCATGATTATATGCTGGCTGCCTaGTGCAGCACTGTGCTGGTGTTTAACAACCTTCTCTTCAGAAGA +
Preference number: 1 (lower is better)
Translates to: WLKQLLISHDYMLAA*CSTVLVFNNLLFRR
Trigger: TCTTCTGAAGAGAAGGTTGTTAAACACCAGCACAGTGCTGCACCAGGCAGCCAGCATATAATCATGAGAAATAAGTAGTTGTTTAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp AAATGCAGTGGCTTAAACAACTACTTATTTCTCATGATTATATGCTaGCTGCCTGGTGCAGCACTGTGCTGGTGTTTAACAACCTTCTCT +
Preference number: 1 (lower is better)
Translates to: KCSGLNNYLFLMIIC*LPGAALCWCLTTFS
Trigger: AGAGAAGGTTGTTAAACACCAGCACAGTGCTGCACCAGGCAGCCAGCATATAATCATGAGAAATAAGTAGTTGTTTAAGCCACTGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp TACTTATTTCTCATGATTATATGCTGGCTGCCTGGTGCAGCACTGTaGTGGTGTTTAACAACCTTCTCTTCAGAAGAAAACAAAAGCAAA +
Preference number: 1 (lower is better)
Translates to: YLFLMIICWLPGAAL*WCLTTFSSEENKSK
Trigger: TTTGCTTTTGTTTTCTTCTGAAGAGAAGGTTGTTAAACACCAGCACAGTGCTGCACCAGGCAGCCAGCATATAATCATGAGAAATAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 90 bp CTTAAACAACTACTTATTTCTCATGATTATATGCTGGCTGCCTGGTaGAGCACTGTGCTGGTGTTTAACAACCTTCTCTTCAGAAGAAAA +
Preference number: 1 (lower is better)
Translates to: LKQLLISHDYMLAAW*STVLVFNNLLFRRK
Trigger: TTTTCTTCTGAAGAGAAGGTTGTTAAACACCAGCACAGTGCTGCACCAGGCAGCCAGCATATAATCATGAGAAATAAGTAGTTGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 90 bp ATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTaGCTTAAACAACTACTTATTTCTCATGATTATATGCTGGCTGCC +
Preference number: 1 (lower is better)
Translates to: MIWLSLLCNKPPQMQ*LKQLLISHDYMLAA
Trigger: GGCAGCCAGCATATAATCATGAGAAATAAGTAGTTGTTTAAGCCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCTTCACCTCCAGTGCTaGAAGCTGCTCAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPLHLQC*KLLRAS
Trigger: AGAGGCCCTGAGCAGCTTTCAGCACTGGAGGTGAAG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR GCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGACCTGTCGGAGACCCTaGGTCCCTTCCCTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGTCRRP*VPSLRG
Trigger: CCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGT...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCTCCAGTGCTGAAAGCTaGTCAGGGCCTCTGGATGCT +
Preference number: 2 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPSSAES*SGPLDA
Trigger: AGCATCCAGAGGCCCTGAGCAGCTTTCAGCACTGGA...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000544093.5
3UTR-3UTR TCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTCTTCGTCTCTGCTGCTaGTGCCACCACGAGCCCTGC +
Preference number: 2 (lower is better)
Translates to: SAADATTSPAQRSPGGRALRLCC*CHHEPC
Trigger: GCAGGGCTCGTGGTGGCATCAGCAGCAGAGACGAAG...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGACCTGTCGGAGACCCTaGGTCCCTTCCCTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGTCRRP*VPSLRG
Trigger: CCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGT...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR GCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTACAAAAGAGCAAAACTaGCCCTCTCGGCGGGACGGC +
Preference number: 2 (lower is better)
Translates to: SAADATTSPAQRSPGGRATKEQN*PSRRDG
Trigger: GCCGTCCCGCCGAGAGGGGCAGTTTTGCTCTTTTGT...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR TCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAACTTCGTCTCTGCTGCTaGTGCCACCACGAGCCCTGC +
Preference number: 2 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKLRLCC*CHHEPC
Trigger: GCAGGGCTCGTGGTGGCATCAGCAGCAGAGACGAAG...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR GCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGACCTGTCGGAGACCCTaGGTCCCTTCCCTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRTCRRP*VPSLRG
Trigger: CCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGT...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR TCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGGAACGGTGTCTCCCGTaGCTCTGTAATCAGACAGCA +
Preference number: 2 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGERCLP*LCNQTA
Trigger: TGCTGTCTGATTACAGAGTCACGGGAGACACCGTTC...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000544093.5
3UTR-3UTR GCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCTGCCACCACGAGCCCTaGCCAGCGCTCACCAGGAGG +
Preference number: 2 (lower is better)
Translates to: PDFLAAVRSYDRGHPREACHHEP*PALTRR
Trigger: CCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCA...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCCGGCCCCCGGGGCTCTaGGGAGGGTCTCACTCAGAG +
Preference number: 2 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFRPPGL*GGSHSE
Trigger: CTCTGAGTGAGACCCTCCCCAGAGCCCCGGGGGCCG...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCTGGGGAGACGGTCTGTaGGGCCAGCGGGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAWGDGL*GQRAAA
Trigger: TGCAGCTGCCCGCTGGCCCCACAGACCGTCTCCCCA...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCTTCACCTCCAGTGCTaGAAGCTGCTCAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPLHLQC*KLLRAS
Trigger: AGAGGCCCTGAGCAGCTTTCAGCACTGGAGGTGAAG...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR TCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCACTTCACCTCCAGTGCTaGAAGCTGCTCAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSLHLQC*KLLRAS
Trigger: AGAGGCCCTGAGCAGCTTTCAGCACTGGAGGTGAAG...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR TCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCCCTCAGGGGGCTGTaGAAACACCTTGACGTGCTT +
Preference number: 2 (lower is better)
Translates to: APQKSHPRAPVGDPASLPSLRGL*KHLDVL
Trigger: AAGCACGTCAAGGTGTTTTCACAGCCCCCTGAGGGA...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR TCA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGGCCACACCCCTGGGGTaGAGGCCGTGTGGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGATPLG*RPCGAG
Trigger: CCCAGCACCACACGGCCTTCACCCCAGGGGTGTGGC...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp TCAGCTCACGGAAGCTGCGCAGGCCACAGCAGTAACACAGAACGGTGTCTCCCGAGAAACACTCCCCGCTaGAGAGCCACGAGGCTCTCG +
Preference number: 2 (lower is better)
Translates to: SAHGSCAGHSSNTERCLPRNTPR*RATRLS
Trigger: CGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCT...CGGGAGACACCGTTCTGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
3UTR CAA 90 bp CTTTTCTGCTTCGACAGCCTGCCCTCCTCTCCTGGCTGGAGGCCCTaGCTCCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: LFCFDSLPSSPGWRP*LPLQSTSLPPLLCH
Trigger: GTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGGAGCAAGGGCCTCCAGCCAGGAGAGGAGGGCAGGCTGTCGAAGCAGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCTTCACCTCCAGTGCTaGAAGCTGCTCAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFLHLQC*KLLRAS
Trigger: AGAGGCCCTGAGCAGCTTTCAGCACTGGAGGTGAAG...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR TCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCCTTCACCTCCAGTGCTaGAAGCTGCTCAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVLHLQC*KLLRAS
Trigger: AGAGGCCCTGAGCAGCTTTCAGCACTGGAGGTGAAG...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR TCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCTCCCTCAGGGGGCTGTaGAAACACCTTGACGTGCTT +
Preference number: 2 (lower is better)
Translates to: RAPVGDPASLPSGGCENTSLRGL*KHLDVL
Trigger: AAGCACGTCAAGGTGTTTTCACAGCCCCCTGAGGGA...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR GCA 90 bp CTCGGAAGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGACCTGTCGGAGACCCTaGGTCCCTTCCCTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: LGSRNVLPILIGQLTEAATCRRP*VPSLRG
Trigger: CCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGT...CGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCTTCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR CCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGCCCGGCTCTCACACCTaGGCCCGACCACTCCCATCC +
Preference number: 2 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRPGSHT*ARPLPS
Trigger: GGATGGGAGTGGTCGGGCCCAGGTGTGAGAGCCGGG...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGAACGGTGTCTCCCGTaGCTCTGTAATCAGACAGCA +
Preference number: 2 (lower is better)
Translates to: RAPVGDPASLPSGGCENTERCLP*LCNQTA
Trigger: TGCTGTCTGATTACAGAGTCACGGGAGACACCGTTC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR GCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCCCTCTCCCTCACCCCTaGACCAACTCAAGACTTCCC +
Preference number: 2 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAPLPHP*TNSRLP
Trigger: GGGAAGTCTTGAGTTGGTGCAGGGGTGAGGGAGAGG...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCAGAGGCTCTCTGAGCTaGCTGCCCTTCCTGGACAGG +
Preference number: 2 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFRGSLS*LPFLDR
Trigger: CCTGTCCAGGAAGGGCAGGCAGCTCAGAGAGCCTCT...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCCTTCAGGGAGCCGGCTaGAGCTGCCTCAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRILQGAG*SCLRAS
Trigger: GCTGGCCCTGAGGCAGCTGCAGCCGGCTCCCTGAAG...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCCCCTGGCTTGGAGCCTaGGCAGCACACGGAGGGGTG +
Preference number: 2 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIPWLGA*AAHGGV
Trigger: CACCCCTCCGTGTGCTGCCCAGGCTCCAAGCCAGGG...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTACCCCCTTCCCTGGCTTaGAGCCTGGGCAGCACACGG +
Preference number: 2 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLPPSLA*SLGSTR
Trigger: CCGTGTGCTGCCCAGGCTCCAAGCCAGGGAAGGGGG...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTTCCATGTCAAACCTCTaGTTGCCAGGTAATTCTTCA +
Preference number: 2 (lower is better)
Translates to: SAADATTSPAQRSPGGRASMSNL*LPGNSS
Trigger: TGAAGAATTACCTGGCAACCAGAGGTTTGACATGGA...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
3UTR-3UTR CCA 90 bp TGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCACAGCAGTAGAAACACTCCCCGCTaGAGAGCCACGAGGCTCTCG +
Preference number: 2 (lower is better)
Translates to: CSADTDRSAHGSCAGHSSRNTPR*RATRLS
Trigger: CGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCT...ACTGCTGTGGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR CCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGGATGTTACGGCCACTaGCAACTCGGAAGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: RAPVGDPASLPSGGCENTGCYGH*QLGSRN
Trigger: ATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACATCC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR GCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCTGCCACCACGAGCCCTaGCCAGCGCTCACCAGGAGG +
Preference number: 2 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFCHHEP*PALTRR
Trigger: CCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCA...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGCGCTGGGAGGATAACTaGCCTGCTCCCAAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRRWEDN*PAPKAS
Trigger: GGAGGCCTTGGGAGCAGGGCAGTTATCCTCCCAGCG...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAAGGCTGTGCTCTGCATaGGGCCCTCCGTCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLRLCSA*GPPSSG
Trigger: CCCTGAGGACGGAGGGCCGCATGCAGAGCACAGCCT...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCCGGCTCCGTCCTGCTaGTGGTCAGCGCGCGGATCT +
Preference number: 2 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFPAPSC*WSARGS
Trigger: AGATCCGCGCGCTGACCAGCAGCAGGACGGAGCCGG...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCGGCAGGGGTCATACATaGTGGGCCTTCAAGGGCCAT +
Preference number: 2 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFGRGHT*WAFKGH
Trigger: ATGGCCCTTGAAGGCCCAGCATGTATGACCCCTGCC...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCTTTTGCTGGGTGGGATaGCTGGGTCTTGAGGACGAG +
Preference number: 2 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAFCWVG*LGLEDE
Trigger: CTCGTCCTCAAGACCCAGCCATCCCACCCAGCAAAA...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCGCCGGTCAGTTTTGCTaGGTGGGATGGCTGGGTCTT +
Preference number: 2 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFAGQFC*VGWLGL
Trigger: AAGACCCAGCCATCCCACCCAGCAAAACTGACCGGC...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGCCTCCAGAAAGCCTGTaGACGACCCACGCAGCCACC +
Preference number: 2 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRPPESL*TTHAAT
Trigger: GGTGGCTGCGTGGGTCGTCCACAGGCTTTCTGGAGG...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCGCCAGGAAGAAGCAGTaGGATCTGCAGCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFARKKQ*DLQQHQ
Trigger: CTGGTGCTGCTGCAGATCCCACTGCTTCTTCCTGGC...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCTGGGGAGACGGTCTGTaGGGCCAGCGGGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFWGDGL*GQRAAA
Trigger: TGCAGCTGCCCGCTGGCCCCACAGACCGTCTCCCCA...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCTCCCTCAGGGGGCTGTaGAAACACCTTGACGTGCTT +
Preference number: 2 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFSLRGL*KHLDVL
Trigger: AAGCACGTCAAGGTGTTTTCACAGCCCCCTGAGGGA...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp GAAGCTGCGCAGGCCACAGCAGTAACACAGAACGGTGTCTCCCGTGACTCTGTATCCCTCAGGGGGCTGTaGAAACACCTTGACGTGCTT +
Preference number: 2 (lower is better)
Translates to: EAAQATAVTQNGVSRDSVSLRGL*KHLDVL
Trigger: AAGCACGTCAAGGTGTTTTCACAGCCCCCTGAGGGA...TACAGAGTCACGGGAGACACCGTTCTGTGTTACTGCTGTGGCCTGCGCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR GCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCACCTGTCGGAGACCCTaGGTCCCTTCCCTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFTCRRP*VPSLRG
Trigger: CCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGT...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp GACGGGATGTTACGGCCACTGGCAACTCGGAAGCAGGAATGTTCTGCCGATACTTCCCTCAGGGGGCTGTaGAAACACCTTGACGTGCTT +
Preference number: 2 (lower is better)
Translates to: DGMLRPLATRKQECSADTSLRGL*KHLDVL
Trigger: AAGCACGTCAAGGTGTTTTCACAGCCCCCTGAGGGA...AGTATCGGCAGAACATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACATCCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR TCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCTGGGAAGGGGAAGAGTaGGTATCAACCGATCTCTCT +
Preference number: 2 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAWEGEE*VSTDLS
Trigger: AGAGAGATCGGTTGATACTCACTCTTCCCCTTCCCA...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGAGGTGCAGCTGGTCCTaGGGAAAGACCAGCATCCTC +
Preference number: 2 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGRCSWS*GKTSIL
Trigger: GAGGATGCTGGTCTTTCCTCAGGACCAGCTGCACCT...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCCTCGGAAGTCCAAAATaGAGGGGCAGGCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRILGSPK*RGRQGW
Trigger: CCAGCCCTGCCTGCCCCTTCATTTTGGACTTCCGAG...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCGGCCATGCCATCTTCTaGCAGTGGAGAGGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIGHAIF*QWRGQV
Trigger: GACCTGCCCTCTCCACTGTCAGAAGATGGCATGGCC...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTAAAAACAGACTTCTaGTTTAACTGTAGTTTCGGA +
Preference number: 2 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGLKTDF*FNCSFG
Trigger: TCCGAAACTACAGTTAAAGCAGAAGTCTGTTTTTAG...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR GCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGCACTTCATTGGCGAATaGCAGCCTCCCCTCTCAGCC +
Preference number: 2 (lower is better)
Translates to: PSGQQLELSVCHRDLELQHFIGE*QPPLSA
Trigger: GGCTGAGAGGGGAGGCTGGCATTCGCCAATGAAGTG...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp AAGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCACCCAGGTTGAGCTCTaGCGAGATGAAGGGGCAATG +
Preference number: 2 (lower is better)
Translates to: KQECSADTDRSAHGSCAGTQVEL*RDEGAM
Trigger: CATTGCCCCTTCATCTCGGCAGAGCTCAACCTGGGT...GCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315585.11
3UTR-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGTGTCAAACCTCTGGTTaGCAGGTAATTCTTCAGGAT +
Preference number: 2 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGCQTSG*QVILQD
Trigger: ATCCTGAAGAATTACCTGGCAACCAGAGGTTTGACA...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000535527.5
3UTR-3UTR GCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCACTCAGGGCCTCTGGATaGTTAGTTTTTGAACCTTGT +
Preference number: 2 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSLRASG*LVFEPC
Trigger: ACAAGGTTCAAAAACTAAGCATCCAGAGGCCCTGAG...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR CCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTCGGCCCCCGGGGCTCTaGGGAGGGTCTCACTCAGAG +
Preference number: 2 (lower is better)
Translates to: VISRCCPGAKHFRQINNSRPPGL*GGSHSE
Trigger: CTCTGAGTGAGACCCTCCCCAGAGCCCCGGGGGCCG...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGCCTGCCTCCCTCGCATaGGGAAGTGAGGCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRPASLA*GSEAAP
Trigger: TGGGGCTGCCTCACTTCCCCATGCGAGGGAGGCAGG...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCGCTGCCTCTCTGCCTTaGCCACACCCCTGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFAASLP*PHPWGE
Trigger: TTCACCCCAGGGGTGTGGCCAAGGCAGAGAGGCAGC...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp CCACAAGCTAATCCAGGATCCTCCCCTCATCTCAAGGTCCTTAATTCCACCATAAAAACGGAGCCCACGTaGAGGCAGAGGGCGGGCACG +
Preference number: 2 (lower is better)
Translates to: PQANPGSSPHLKVLNSTIKTEPT*RQRAGT
Trigger: CGTGCCCGCCCTCTGCCTCCACGTGGGCTCCGTTTT...TATGGTGGAATTAAGGACCTTGAGATGAGGGGAGGATCCTGGATTAGCTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGAGCACTAGGCGTTTCTaGAGGTGGCTCCCCCGAAGA +
Preference number: 2 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRSTRRF*RWLPRR
Trigger: TCTTCGGGGGAGCCACCTCCAGAAACGCCTAGTGCT...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCCAGAATGAAGAGACCTaGGCAGGTTTCACAGGAGTC +
Preference number: 2 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFQNEET*AGFTGV
Trigger: GACTCCTGTGAAACCTGCTCAGGTCTCTTCATTCTG...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCAAGCAGAGGAACACCTaGGGGGCTCCAGGAGAAGCA +
Preference number: 2 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIKQRNT*GAPGEA
Trigger: TGCTTCTCCTGGAGCCCCTCAGGTGTTCCTCTGCTT...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAGACAACCGTGAAAAGTaGGCGACAGAGGAAGGGGCG +
Preference number: 2 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLDNREK*ATEEGA
Trigger: CGCCCCTTCCTCTGTCGCTCACTTTTCACGGTTGTC...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGCCAGGACCTCAGAGGTaGCTGTATCTGCAGACATGG +
Preference number: 2 (lower is better)
Translates to: PSGQQLELSVCHRDLELQPGPQR*LYLQTW
Trigger: CCATGTCTGCAGATACAGTCACCTCTGAGGTCCTGG...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGCTAAAAACAGACTTCTaGTTTAACTGTAGTTTCGGA +
Preference number: 2 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGLKTDF*FNCSFG
Trigger: TCCGAAACTACAGTTAAAGCAGAAGTCTGTTTTTAG...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
3UTR-3UTR GCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCACAGCCGGTCAGTTTTaGTGGGTGGGATGGCTGGGT +
Preference number: 2 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRITAGQF*WVGWLG
Trigger: ACCCAGCCATCCCACCCAGCAAAACTGACCGGCTGT...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGAGGGGCGCCTGTTTGTaGCGCGGGAAAGATTTCAAG +
Preference number: 2 (lower is better)
Translates to: PSGQQLELSVCHRDLELQRGACL*RGKDFK
Trigger: CTTGAAATCTTTCCCGCGGCACAAACAGGCGCCCCT...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCGGTCTCACAAATGCATaGTCCCAGCACAGCGCACGG +
Preference number: 2 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIGLTNA*SQHSAR
Trigger: CCGTGCGCTGTGCTGGGAGCATGCATTTGTGAGACC...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCTCTGCTTCGACAGCCTaGCCTCCTCTCCTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFSASTA*PPLLAG
Trigger: TCCAGCCAGGAGAGGAGGGCAGGCTGTCGAAGCAGA...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCTTGGGTGCTCAGCCATaGCCCACACTCCACCTCCAA +
Preference number: 2 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRILGAQP*PTLHLQ
Trigger: TTGGAGGTGGAGTGTGGGGCATGGCTGAGCACCCAA...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp CCACAAGCTAATCCAGGATCCTCCCCTCATCTCAAGGTCCTTAATTCCACCATACCTCCAGAAAGCCTGTaGACGACCCACGCAGCCACC +
Preference number: 2 (lower is better)
Translates to: PQANPGSSPHLKVLNSTIPPESL*TTHAAT
Trigger: GGTGGCTGCGTGGGTCGTCCACAGGCTTTCTGGAGG...TATGGTGGAATTAAGGACCTTGAGATGAGGGGAGGATCCTGGATTAGCTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTACAGCAGGTGACAGAGTaGCCATCACTAGCAGTGAGG +
Preference number: 2 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLQQVTE*PSLAVR
Trigger: CCTCACTGCTAGTGATGGTCACTCTGTCACCTGCTG...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp CCACAAGCTAATCCAGGATCCTCCCCTCATCTCAAGGTCCTTAATTCCACCATACCTGCAGGAGCTGAATaGGGAGAGGCTGCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: PQANPGSSPHLKVLNSTIPAGAE*GEAAEG
Trigger: TCCCTCTGCAGCCTCTCCTCATTCAGCTCCTGCAGG...TATGGTGGAATTAAGGACCTTGAGATGAGGGGAGGATCCTGGATTAGCTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp TGCTTGTCTCTGTATTTTAAAAACACGCTCTCTTCACCTCCAGTGCTGAAAGCTTGCCACCACGAGCCCTaGCCAGCGCTCACCAGGAGG +
Preference number: 2 (lower is better)
Translates to: CLSLYFKNTLSSPPVLKACHHEP*PALTRR
Trigger: CCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCA...AGCTTTCAGCACTGGAGGTGAAGAGAGCGTGTTTTTAAAATACAGAGACAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR CCA 90 bp ATGCTCCCTTCTCCTGAAACAATGTTTTTGATAAACTTGCCCTTCTCCCTTGAACGGCCCCCGGGGCTCTaGGGAGGGTCTCACTCAGAG +
Preference number: 2 (lower is better)
Translates to: MLPSPETMFLINLPFSLERPPGL*GGSHSE
Trigger: CTCTGAGTGAGACCCTCCCCAGAGCCCCGGGGGCCG...TTCAAGGGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGGAGAAGGGAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR CCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGATAGATAAAATGCTGTaGTTTTCCCAGCAGCAGGAT +
Preference number: 2 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRIDKML*FSQQQD
Trigger: ATCCTGCTGCTGGGAAAACCACAGCATTTTATCTAT...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
3UTR-3UTR CCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCTTTTGCTGGGTGGGATaGCTGGGTCTTGAGGACGAG +
Preference number: 2 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIFCWVG*LGLEDE
Trigger: CTCGTCCTCAAGACCCAGCCATCCCACCCAGCAAAA...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGCCAGCATTGGCAGAATaGAGAGACCTGAGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: PSGQQLELSVCHRDLELQPALAE*RDLSRF
Trigger: AAACCTGCTCAGGTCTCTTCATTCTGCCAATGCTGG...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp CCACAAGCTAATCCAGGATCCTCCCCTCATCTCAAGGTCCTTAATTCCACCATAAAGCAGAGGAACACCTaGGGGGCTCCAGGAGAAGCA +
Preference number: 2 (lower is better)
Translates to: PQANPGSSPHLKVLNSTIKQRNT*GAPGEA
Trigger: TGCTTCTCCTGGAGCCCCTCAGGTGTTCCTCTGCTT...TATGGTGGAATTAAGGACCTTGAGATGAGGGGAGGATCCTGGATTAGCTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGGGAGGGGCTGGTACCTaGGGGGCTGTTTGTGAGAAT +
Preference number: 2 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRGGAGT*GAVCEN
Trigger: ATTCTCACAAACAGCCCCTCAGGTACCAGCCCCTCC...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCTTTCAGGCCGATGGTTaGGGGAGGACTTCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFFQADG*GRTSQE
Trigger: CTCCTGAGAAGTCCTCCCTCAACCATCGGCCTGAAA...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGGAAAATAAAACTGGGTaGAGCGTTCGAGCGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGENKTG*SVRARG
Trigger: CCCTCTCGCTCGAACGCTTCACCCAGTTTTATTTTC...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCCTAAAAACAGACTTCTaGTTTAACTGTAGTTTCGGA +
Preference number: 2 (lower is better)
Translates to: APQKSHPRAPVGDPASLPLKTDF*FNCSFG
Trigger: TCCGAAACTACAGTTAAAGCAGAAGTCTGTTTTTAG...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR GCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTGCCGCAGATGAGGAGTaGGTGGGGAGACGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: VISRCCPGAKHFRQINNSAADEE*VGRRSV
Trigger: CACAGACCGTCTCCCCACGCACTCCTCATCTGCGGC...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGCACTCCTGGTCTGACTaGCCTTCAACATTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: PSGQQLELSVCHRDLELQHSWSD*PSTFSP
Trigger: AGGAGAGAATGTTGAAGGCCAGTCAGACCAGGAGTG...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCACGGCACTCACTCCTaGTCTGACTGGCCTTCAACA +
Preference number: 2 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFHGTHS*SDWPST
Trigger: TGTTGAAGGCCAGTCAGACCAGGAGTGAGTGCCGTG...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGATTCAAGGCCAGCACTaGGCAGGGCGGGTCTCACAA +
Preference number: 2 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRIQGQH*AGRVSQ
Trigger: TTGTGAGACCCGCCCTGCCCAGTGCTGGCCTTGAAT...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTACCAGCATTGGCAGAATaGAGAGACCTGAGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLPALAE*RDLSRF
Trigger: AAACCTGCTCAGGTCTCTTCATTCTGCCAATGCTGG...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGGAAAGTAGTGCGTCCTaGGCACTCATCACCTTTGTT +
Preference number: 2 (lower is better)
Translates to: PSGQQLELSVCHRDLELQESSAS*ALITFV
Trigger: AACAAAGGTGATGAGTGCTCAGGACGCACTACTTTC...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGGAAAGTAGTGCGTCCTaGGCACTCATCACCTTTGTT +
Preference number: 2 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGESSAS*ALITFV
Trigger: AACAAAGGTGATGAGTGCTCAGGACGCACTACTTTC...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp CAGAGTGTTACAATATGTTCAAGCCCTAAATCCCAGGACCTCAGAGGTGACTGTAGAAGCAGTGGGATCTaGAGCAGCACCAGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: QSVTICSSPKSQDLRGDCRSSGI*SSTRLS
Trigger: GGACAGCCTGGTGCTGCTGCAGATCCCACTGCTTCT...ACAGTCACCTCTGAGGTCCTGGGATTTAGGGCTTGAACATATTGTAACACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTTCCTTCCCTTCCCAGTaGAGGGCTCCCGGCAACCTA +
Preference number: 2 (lower is better)
Translates to: VISRCCPGAKHFRQINNSSFPSQ*RAPGNL
Trigger: TAGGTTGCCGGGAGCCCTGCACTGGGAAGGGAAGGA...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp AGGGCCATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGTGCAGGGCTAGGCTGTaGTCTGCATGCGGCCCTCCG +
Preference number: 2 (lower is better)
Translates to: RAMIWLSLLCNKPPQMQWCRARL*SACGPP
Trigger: CGGAGGGCCGCATGCAGAGCACAGCCTAGCCCTGCA...CCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAGTGATCAGTAGATGCTaGCCTGGGGCCAAACATTTC +
Preference number: 2 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLVISRC*PGAKHF
Trigger: GAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGAAGGAGCGACTAACTTaGCGGCCACGTCGAGGGTTA +
Preference number: 2 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRKERLT*RPRRGL
Trigger: TAACCCTCGACGTGGCCGCCAAGTTAGTCGCTCCTT...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCACCACGGAGTGTCAATaGTATCCAGCATGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRITTECQ*YPACGV
Trigger: AACCCCACATGCTGGATACCATTGACACTCCGTGGT...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp ATGCTCCCTTCTCCTGAAACAATGTTTTTGATAAACTTGCCCTTCTCCCTTGAACTTCGTCTCTGCTGCTaGTGCCACCACGAGCCCTGC +
Preference number: 2 (lower is better)
Translates to: MLPSPETMFLINLPFSLELRLCC*CHHEPC
Trigger: GCAGGGCTCGTGGTGGCATCAGCAGCAGAGACGAAG...TTCAAGGGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGGAGAAGGGAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR TCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGCTTCTGGTGCTCAGCTaGAGACAAAGCCTCCACACT +
Preference number: 2 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRLLVLS*RQSLHT
Trigger: AGTGTGGAGGCTTTGTCTTCAGCTGAGCACCAGAAG...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCTGGGAAGGGGAAGAGTaGGTATCAACCGATCTCTCT +
Preference number: 2 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFWEGEE*VSTDLS
Trigger: AGAGAGATCGGTTGATACTCACTCTTCCCCTTCCCA...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp CAGAGTGTTACAATATGTTCAAGCCCTAAATCCCAGGACCTCAGAGGTGACTGTGGGATGGCTGGGTCTTaGGGACGAGGAAGTACAGAA +
Preference number: 2 (lower is better)
Translates to: QSVTICSSPKSQDLRGDCGMAGS*GRGSTE
Trigger: TTCTGTACTTCCTCGTCCTCAAGACCCAGCCATCCC...ACAGTCACCTCTGAGGTCCTGGGATTTAGGGCTTGAACATATTGTAACACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCATAAACCACCCCAAATaGAGTGGCTTAAACAACTAC +
Preference number: 2 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFINHPK*SGLNNY
Trigger: GTAGTTGTTTAAGCCACTGCATTTGGGGTGGTTTAT...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTGGCTCCTTACCACGCTaGGAGGATAACTGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: VISRCCPGAKHFRQINNSGSLPR*EDNCPA
Trigger: AGCAGGGCAGTTATCCTCCCAGCGTGGTAAGGAGCC...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTGCCGGTCAGTTTTGCTaGGTGGGATGGCTGGGTCTT +
Preference number: 2 (lower is better)
Translates to: VISRCCPGAKHFRQINNSAGQFC*VGWLGL
Trigger: AAGACCCAGCCATCCCACCCAGCAAAACTGACCGGC...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp AGGGCCATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGCTGCCAGCCCGAAGCTaGGGGGCTGTCACCAGGAAA +
Preference number: 2 (lower is better)
Translates to: RAMIWLSLLCNKPPQMQWLPARS*GAVTRK
Trigger: TTTCCTGGTGACAGCCCCCCAGCTTCGGGCTGGCAG...CCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp CTCGGAAGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGTCCATGTCAAACCTCTaGTTGCCAGGTAATTCTTCA +
Preference number: 2 (lower is better)
Translates to: LGSRNVLPILIGQLTEAASMSNL*LPGNSS
Trigger: TGAAGAATTACCTGGCAACCAGAGGTTTGACATGGA...CGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCTTCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000535527.5
3UTR-3UTR GCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGTCAGTGATCAGTAGATaGTGCCCTGGGGCCAAACAT +
Preference number: 2 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRSVISR*CPGAKH
Trigger: ATGTTTGGCCCCAGGGCAGCATCTACTGATCACTGA...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCACAAAGCCTCCACACTaGATGAACAGGTTGTGGCTT +
Preference number: 2 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFTKPPH*MNRLWL
Trigger: AAGCCACAACCTGTTCATCCAGTGTGGAGGCTTTGT...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp CAGAGTGTTACAATATGTTCAAGCCCTAAATCCCAGGACCTCAGAGGTGACTGTAGGGTCTCTGCATTGTaGCTTCTTCTGGTGCTCAGC +
Preference number: 2 (lower is better)
Translates to: QSVTICSSPKSQDLRGDCRVSAL*LLLVLS
Trigger: GCTGAGCACCAGAAGAAGCCACAATGCAGAGACCCT...ACAGTCACCTCTGAGGTCCTGGGATTTAGGGCTTGAACATATTGTAACACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp AGGGCCATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGGCGGGGACAGCGTTCTaGTTTCCCCATCAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: RAMIWLSLLCNKPPQMQWAGTAF*FPHQAR
Trigger: CCTGGCTTGATGGGGAAACCAGAACGCTGTCCCCGC...CCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCATGGTATCCAGCATGTaGGGTTTGCCAAACAACAAC +
Preference number: 2 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIMVSSM*GLPNNN
Trigger: GTTGTTGTTTGGCAAACCCCACATGCTGGATACCAT...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CAA 90 bp GCTGGTCCTGAGGAAAGACCAGCATCCTCTACAGGGCAAGTGTTCTaGTTTCTACTTTTTGGAGATGGGAAGGGGAAGAGTGAGTATCAA +
Preference number: 2 (lower is better)
Translates to: AGPEERPASSTGQVF*FLLFGDGKGKSEYQ
Trigger: TTGATACTCACTCTTCCCCTTCCCATCTCCAAAAAGTAGAAACAAGAACACTTGCCCTGTAGAGGATGCTGGTCTTTCCTCAGGACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CAA 90 bp GAAATGGGATCATATCGTATGTGGCCTTCTGTGACGCCTTTTCACTaGCATGGTGTGTTTAAGGTCCATCCACACTCAGCACGTTTCCTC +
Preference number: 2 (lower is better)
Translates to: EMGSYRMWPSVTPFH*HGVFKVHPHSARFL
Trigger: GAGGAAACGTGCTGAGTGTGGATGGACCTTAAACACACCATGCAAGTGAAAAGGCGTCACAGAAGGCCACATACGATATGATCCCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp ATGCTCCCTTCTCCTGAAACAATGTTTTTGATAAACTTGCCCTTCTCCCTTGAAACAAAAGAGCAAAACTaGCCCTCTCGGCGGGACGGC +
Preference number: 2 (lower is better)
Translates to: MLPSPETMFLINLPFSLETKEQN*PSRRDG
Trigger: GCCGTCCCGCCGAGAGGGGCAGTTTTGCTCTTTTGT...TTCAAGGGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGGAGAAGGGAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR GCA 90 bp ACTTTCCTCCACAAATACAGATTGCTGCTTCTCAGTTTCTATCAAGAGCAAGACACAAAAGAGCAAAACTaGCCCTCTCGGCGGGACGGC +
Preference number: 2 (lower is better)
Translates to: TFLHKYRLLLLSFYQEQDTKEQN*PSRRDG
Trigger: GCCGTCCCGCCGAGAGGGGCAGTTTTGCTCTTTTGT...GTCTTGCTCTTGATAGAAACTGAGAAGCAGCAATCTGTATTTGTGGAGGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
3UTR-3UTR GCA 90 bp CCACAAGCTAATCCAGGATCCTCCCCTCATCTCAAGGTCCTTAATTCCACCATATGTTTTAAGCCAATCTaGCCAGACTTCCTGGCTGCA +
Preference number: 2 (lower is better)
Translates to: PQANPGSSPHLKVLNSTICFKPI*PDFLAA
Trigger: TGCAGCCAGGAAGTCTGGGCAGATTGGCTTAAAACA...TATGGTGGAATTAAGGACCTTGAGATGAGGGGAGGATCCTGGATTAGCTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGAAATCCTCTTCACAGTaGGCCAGGAGTTGGACTTCT +
Preference number: 2 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRKSSSQ*ARSWTS
Trigger: AGAAGTCCAACTCCTGGCCCACTGTGAAGAGGATTT...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCACAAATAAACAACAGTaGGCAGACAGGCAAGATCCC +
Preference number: 2 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFTNKQQ*ADRQDP
Trigger: GGGATCTTGCCTGTCTGCCCACTGTTGTTTATTTGT...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp CCACAAGCTAATCCAGGATCCTCCCCTCATCTCAAGGTCCTTAATTCCACCATACGTTCAGTAGCCAACTaGTCAGTGATCAGTAGATGC +
Preference number: 2 (lower is better)
Translates to: PQANPGSSPHLKVLNSTIRSVAN*SVISRC
Trigger: GCATCTACTGATCACTGACCAGTTGGCTACTGAACG...TATGGTGGAATTAAGGACCTTGAGATGAGGGGAGGATCCTGGATTAGCTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp CTTATGCTCCCTTCTCCTGAAACAATGTTTTTGATAAACTTGCCCTTCTCCCTTTCCCTCAGGGGGCTGTaGAAACACCTTGACGTGCTT +
Preference number: 2 (lower is better)
Translates to: LMLPSPETMFLINLPFSLSLRGL*KHLDVL
Trigger: AAGCACGTCAAGGTGTTTTCACAGCCCCCTGAGGGA...AAGGGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGGAGAAGGGAGCATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR TCA 90 bp CAGAGTGTTACAATATGTTCAAGCCCTAAATCCCAGGACCTCAGAGGTGACTGTGAAGAGAAGATGACGTaGGAACTCAAGGAGATGCTG +
Preference number: 2 (lower is better)
Translates to: QSVTICSSPKSQDLRGDCEEKMT*ELKEML
Trigger: CAGCATCTCCTTGAGTTCTCACGTCATCTTCTCTTC...ACAGTCACCTCTGAGGTCCTGGGATTTAGGGCTTGAACATATTGTAACACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAATAGATAAAATGCTGTaGTTTTCCCAGCAGCAGGAT +
Preference number: 2 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLIDKML*FSQQQD
Trigger: ATCCTGCTGCTGGGAAAACCACAGCATTTTATCTAT...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp AGGGCCATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGCTTCTGGTGCTCAGCTaGAGACAAAGCCTCCACACT +
Preference number: 2 (lower is better)
Translates to: RAMIWLSLLCNKPPQMQWLLVLS*RQSLHT
Trigger: AGTGTGGAGGCTTTGTCTTCAGCTGAGCACCAGAAG...CCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR TCA 90 bp AGGGCCATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGGGAGGAGGGTTGGCCTaGATCCCTCAGTCTGTTTTA +
Preference number: 2 (lower is better)
Translates to: RAMIWLSLLCNKPPQMQWGGGLA*IPQSVL
Trigger: TAAAACAGACTGAGGGATTCAGGCCAACCCTCCTCC...CCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp AGGGCCATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGTCTGCCCAGACTTCCTaGCTGCAGTCAGAAGCTATG +
Preference number: 2 (lower is better)
Translates to: RAMIWLSLLCNKPPQMQWSAQTS*LQSEAM
Trigger: CATAGCTTCTGACTGCAGCCAGGAAGTCTGGGCAGA...CCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp AGGGCCATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGGAGTTCACGGCCACCTaGTTCCATAAAACACAGCTC +
Preference number: 2 (lower is better)
Translates to: RAMIWLSLLCNKPPQMQWEFTAT*FHKTQL
Trigger: GAGCTGTGTTTTATGGAAGCAGGTGGCCGTGAACTC...CCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CCA 90 bp AGGGCCATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGCATTGTGGCTTCTTCTaGTGCTCAGCTGAAGACAAA +
Preference number: 2 (lower is better)
Translates to: RAMIWLSLLCNKPPQMQWHCGFF*CSAEDK
Trigger: TTTGTCTTCAGCTGAGCACCAGAAGAAGCCACAATG...CCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp CAGAGTGTTACAATATGTTCAAGCCCTAAATCCCAGGACCTCAGAGGTGACTGTCTAAAAACAGACTTCTaGTTTAACTGTAGTTTCGGA +
Preference number: 2 (lower is better)
Translates to: QSVTICSSPKSQDLRGDCLKTDF*FNCSFG
Trigger: TCCGAAACTACAGTTAAAGCAGAAGTCTGTTTTTAG...ACAGTCACCTCTGAGGTCCTGGGATTTAGGGCTTGAACATATTGTAACACTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp CAGAGTGTTACAATATGTTCAAGCCCTAAATCCCAGGACCTCAGAGGTGACTGTACAAATACAGATTGCTaGTTCTCAGTTTCTATCAAG +
Preference number: 2 (lower is better)
Translates to: QSVTICSSPKSQDLRGDCTNTDC*FSVSIK
Trigger: CTTGATAGAAACTGAGAAGCAGCAATCTGTATTTGT...ACAGTCACCTCTGAGGTCCTGGGATTTAGGGCTTGAACATATTGTAACACTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR GCA 90 bp ATGCTCCCTTCTCCTGAAACAATGTTTTTGATAAACTTGCCCTTCTCCCTTGAATGTCAAACCTCTGGTTaGCAGGTAATTCTTCAGGAT +
Preference number: 2 (lower is better)
Translates to: MLPSPETMFLINLPFSLECQTSG*QVILQD
Trigger: ATCCTGAAGAATTACCTGGCAACCAGAGGTTTGACA...TTCAAGGGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGGAGAAGGGAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315585.11
3UTR-3UTR GCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTCTAAAAACAGACTTCTaGTTTAACTGTAGTTTCGGA +
Preference number: 2 (lower is better)
Translates to: VISRCCPGAKHFRQINNSLKTDF*FNCSFG
Trigger: TCCGAAACTACAGTTAAAGCAGAAGTCTGTTTTTAG...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp CCCGGCTCCGTCCTGCTGCTGGTCAGCGCGCGGATCTaGAGGGCTAGGCTGTGCTCTGCATGCGGCCCTCCG +
Preference number: 3 (lower is better)
Translates to: PGSVLLLVSARI*RARLCSACGPP
Trigger: CGGAGGGCCGCATGCAGAGCACAGCCTAGCCCTGCAGATCCGCGCGCTGACCAGCAGCAGGACGGAGCCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GCAGGAGCTAGCGTGCATGCCAAAACGGAGCCCACGTaGAGGCAGAGGGCGGGCACGGCCGCGGGGACAGCG +
Preference number: 3 (lower is better)
Translates to: AGASVHAKTEPT*RQRAGTAAGTA
Trigger: CGCTGTCCCCGCGGCCGTGCCCGCCCTCTGCCTCCACGTGGGCTCCGTTTTGGCATGCACGCTAGCTCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp GGAGGTGGCTCCCCCGAAGATCACCCGGCTCCGTCCTaGTGCTGGTCAGCGCGCGGATCTGCAGGGCTAGGC +
Preference number: 3 (lower is better)
Translates to: GGGSPEDHPAPS*CWSARGSAGLG
Trigger: GCCTAGCCCTGCAGATCCGCGCGCTGACCAGCAGCAGGACGGAGCCGGGTGATCTTCGGGGGAGCCACCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GCTCACCAGGAGGGCGGGCTGCGGCCCCCGGGGCTCTaGGGAGGGTCTCACTCAGAGGGTAAAGCTCCACAG +
Preference number: 3 (lower is better)
Translates to: AHQEGGLRPPGL*GGSHSEGKAPQ
Trigger: CTGTGGAGCTTTACCCTCTGAGTGAGACCCTCCCCAGAGCCCCGGGGGCCGCAGCCCGCCCTCCTGGTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR GCA 72 bp GGTGGCTCCCCCGAAGATCACCCGGCTCCGTCCTGCTaGTGGTCAGCGCGCGGATCTGCAGGGCTAGGCTGT +
Preference number: 3 (lower is better)
Translates to: GGSPEDHPAPSC*WSARGSAGLGC
Trigger: ACAGCCTAGCCCTGCAGATCCGCGCGCTGACCAGCAGCAGGACGGAGCCGGGTGATCTTCGGGGGAGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GGCTCCCCCGAAGATCACCCGGCTCCGTCCTGCTGCTaGTCAGCGCGCGGATCTGCAGGGCTAGGCTGTGCT +
Preference number: 3 (lower is better)
Translates to: GSPEDHPAPSCC*SARGSAGLGCA
Trigger: AGCACAGCCTAGCCCTGCAGATCCGCGCGCTGACCAGCAGCAGGACGGAGCCGGGTGATCTTCGGGGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp GGCTGCAGCCGCCCTCAGAAGGCGCAGGAGCTAGCGTaGATGCCAAAACGGAGCCCACGTGGAGGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: GCSRPQKAQELA*MPKRSPRGGRG
Trigger: CCCTCTGCCTCCACGTGGGCTCCGTTTTGGCATGCACGCTAGCTCCTGCGCCTTCTGAGGGCGGCTGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp AGGCAGAGGGCGGGCACGGCCGCGGGGACAGCGTTCTaGTTTCCCCATCAAGCCAGGCTGGAGGGACGATCT +
Preference number: 3 (lower is better)
Translates to: RQRAGTAAGTAF*FPHQARLEGRS
Trigger: AGATCGTCCCTCCAGCCTGGCTTGATGGGGAAACCAGAACGCTGTCCCCGCGGCCGTGCCCGCCCTCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp GAGGCCTCACTGGGGTGGACGGGTTCACCTAGAACCTaGGGCCCCCTTCCCTGGCTTGGAGCCTGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: EASLGWTGSPRT*GPLPWLGAWAA
Trigger: TGCTGCCCAGGCTCCAAGCCAGGGAAGGGGGCCTCAGGTTCTAGGTGAACCCGTCCACCCCAGTGAGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp TCCTCAGGGAGGCAAGACCCGGCTTCTCTACACGGCTaGAGCCGCCCTCAGAAGGCGCAGGAGCTAGCGTGC +
Preference number: 3 (lower is better)
Translates to: SSGRQDPASLHG*SRPQKAQELAC
Trigger: GCACGCTAGCTCCTGCGCCTTCTGAGGGCGGCTGCAGCCGTGTAGAGAAGCCGGGTCTTGCCTCCCTGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp CCAAACTCAGCTGCCTCTCTGCCTTGGCCACACCCCTaGGGTGAAGGCCGTGTGGTGCTGGGAGCAGCCCCT +
Preference number: 3 (lower is better)
Translates to: PNSAASLPWPHP*GEGRVVLGAAP
Trigger: AGGGGCTGCTCCCAGCACCACACGGCCTTCACCCCAGGGGTGTGGCCAAGGCAGAGAGGCAGCTGAGTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGCAAGGAGCGACTAACTaGGCGGCCACGTCGAGGGTT +
Preference number: 3 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGQGATN*AATSRV
Trigger: AACCCTCGACGTGGCCGCCAAGTTAGTCGCTCCTTG...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
3UTR CCA 72 bp CGCCTGTTCTGCGGCGTTTTGATCCAGCGGCCCAAGTaGACCCACATTCAAGGCCAGCACTGGGCAGGGCGG +
Preference number: 3 (lower is better)
Translates to: RLFCGVLIQRPK*THIQGQHWAGR
Trigger: CCGCCCTGCCCAGTGCTGGCCTTGAATGTGGGTCCACTTGGGCCGCTGGATCAAAACGCCGCAGAACAGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GACAGTGGAGAGGGCAGGTCTGCCGGGCGTACGTGGTaGGCCTGGGGTCCCCACTGGAAACAGCTCTCTTTG +
Preference number: 3 (lower is better)
Translates to: DSGEGRSAGRTW*AWGPHWKQLSL
Trigger: CAAAGAGAGCTGTTTCCAGTGGGGACCCCAGGCCCACCACGTACGCCCGGCAGACCTGCCCTCTCCACTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp TCTGACAGTGGAGAGGGCAGGTCTGCCGGGCGTACGTaGTGGGCCTGGGGTCCCCACTGGAAACAGCTCTCT +
Preference number: 3 (lower is better)
Translates to: SDSGEGRSAGRT*WAWGPHWKQLS
Trigger: AGAGAGCTGTTTCCAGTGGGGACCCCAGGCCCACCACGTACGCCCGGCAGACCTGCCCTCTCCACTGTCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp TCTGCAGCAGCACCAGGCTGTCCTCCAGAAAGCCTGTaGACGACCCACGCAGCCACCCCACAAGGAGAGCAG +
Preference number: 3 (lower is better)
Translates to: SAAAPGCPPESL*TTHAATPQGEQ
Trigger: CTGCTCTCCTTGTGGGGTGGCTGCGTGGGTCGTCCACAGGCTTTCTGGAGGACAGCCTGGTGCTGCTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp CAGCGGCCCAAGTGGACCCACATTCAAGGCCAGCACTaGGCAGGGCGGGTCTCACAAATGCATGCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: QRPKWTHIQGQH*AGRVSQMHAPS
Trigger: GCTGGGAGCATGCATTTGTGAGACCCGCCCTGCCCAGTGCTGGCCTTGAATGTGGGTCCACTTGGGCCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GGAGAGGGCAGGTCTGCCGGGCGTACGTGGTGGGCCTaGGGTCCCCACTGGAAACAGCTCTCTTTGACAACA +
Preference number: 3 (lower is better)
Translates to: GEGRSAGRTWWA*GPHWKQLSLTT
Trigger: TGTTGTCAAAGAGAGCTGTTTCCAGTGGGGACCCCAGGCCCACCACGTACGCCCGGCAGACCTGCCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp TCCTCCCAGGGCCCATTCCAACCAGGCCAACTGAGCTaGGTGGGTAAGGCTGGAAGGGGTGCCATCCCACAC +
Preference number: 3 (lower is better)
Translates to: SSQGPFQPGQLS*VGKAGRGAIPH
Trigger: GTGTGGGATGGCACCCCTTCCAGCCTTACCCACTCAGCTCAGTTGGCCTGGTTGGAATGGGCCCTGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp TGCCCTCCTCTCCTGGCTGGAGGCCCTTGCTCCCTCTaGAAAGCACATCCCTCCCACCTCTTCTCTGTCACC +
Preference number: 3 (lower is better)
Translates to: CPPLLAGGPCSL*KAHPSHLFSVT
Trigger: GGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGGAGCAAGGGCCTCCAGCCAGGAGAGGAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp AAGACACAGACGCAGGGTAGCCCCAGCCCACTTCATTaGCGAATGCCAGCCTCCCCTCTCAGCCTCGCACCT +
Preference number: 3 (lower is better)
Translates to: KTQTQGSPSPLH*RMPASPLSLAP
Trigger: AGGTGCGAGGCTGAGAGGGGAGGCTGGCATTCGCCAATGAAGTGGGCTGGGGCTACCCTGCGTCTGTGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GAAGCTATGACAGAGGCCATCCCAGAGAGGCCTCACTaGGGTGGACGGGTTCACCTAGAACCTGAGGCCCCC +
Preference number: 3 (lower is better)
Translates to: EAMTEAIPERPH*GGRVHLEPEAP
Trigger: GGGGGCCTCAGGTTCTAGGTGAACCCGTCCACCCCAGTGAGGCCTCTCTGGGATGGCCTCTGTCATAGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp TCACAGGCTCAAGTGATCGGATACGGGTATCTGTGGTaGCGGGACGGGGACATGGCTCAGCCCACCACGGAG +
Preference number: 3 (lower is better)
Translates to: SQAQVIGYGYLW*RDGDMAQPTTE
Trigger: CTCCGTGGTGGGCTGAGCCATGTCCCCGTCCCGCCACCACAGATACCCGTATCCGATCACTTGAGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAACCCAGCAGCAGGATATaGTGTACGTCCTGTAGGCTG +
Preference number: 3 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKPSSRI*CTSCRL
Trigger: CAGCCTACAGGACGTACACAATATCCTGCTGCTGGG...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
3UTR TCA 72 bp GAGGACAGCCAGCAGGATGACTCCTGGGGTTGGGCCTaGGCTACAGGGAGGCCATGCCATCTTCTGACAGTG +
Preference number: 3 (lower is better)
Translates to: EDSQQDDSWGWA*ATGRPCHLLTV
Trigger: CACTGTCAGAAGATGGCATGGCCTCCCTGTAGCTCAGGCCCAACCCCAGGAGTCATCCTGCTGGCTGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp TGTCTACCAGTTACCAGCACTAGGCGTTTCTGGAGGTaGCTCCCCCGAAGATCACCCGGCTCCGTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: CLPVTSTRRFWR*LPRRSPGSVLL
Trigger: CAGCAGGACGGAGCCGGGTGATCTTCGGGGGAGCCACCTCCAGAAACGCCTAGTGCTGGTAACTGGTAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp TCGGATACGGGTATCTGTGGTGGCGGGACGGGGACATaGCTCAGCCCACCACGGAGTGTCAATGGTATCCAG +
Preference number: 3 (lower is better)
Translates to: SDTGICGGGTGT*LSPPRSVNGIQ
Trigger: CTGGATACCATTGACACTCCGTGGTGGGCTGAGCCATGTCCCCGTCCCGCCACCACAGATACCCGTATCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp AGACTCACCGCCTCAGAAGGAGACAACCGTGAAAAGTaGGCGACAGAGGAAGGGGCGCCTGTTTGTGCCGCG +
Preference number: 3 (lower is better)
Translates to: RLTASEGDNREK*ATEEGAPVCAA
Trigger: CGCGGCACAAACAGGCGCCCCTTCCTCTGTCGCTCACTTTTCACGGTTGTCTCCTTCTGAGGCGGTGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp GAGCAGGGCTCCAAAACCACCACAGCCGGTCAGTTTTaGTGGGTGGGATGGCTGGGTCTTGAGGACGAGGAA +
Preference number: 3 (lower is better)
Translates to: EQGSKTTTAGQF*WVGWLGLEDEE
Trigger: TTCCTCGTCCTCAAGACCCAGCCATCCCACCCAGCAAAACTGACCGGCTGTGGTGGTTTTGGAGCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp TGTCTGTCCATGCATCAGCTGATGGACCCACTGAGGTaGCTTACGCGAGCCCAGCACTATTCTGCGTGCGGG +
Preference number: 3 (lower is better)
Translates to: CLSMHQLMDPLR*LTRAQHYSACG
Trigger: CCCGCACGCAGAATAGTGCTGGGCTCGCGTAAGGCACCTCAGTGGGTCCATCAGCTGATGCATGGACAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp AATGGCTGTCTACCAGTTACCAGCACTAGGCGTTTCTaGAGGTGGCTCCCCCGAAGATCACCCGGCTCCGTC +
Preference number: 3 (lower is better)
Translates to: NGCLPVTSTRRF*RWLPRRSPGSV
Trigger: GACGGAGCCGGGTGATCTTCGGGGGAGCCACCTCCAGAAACGCCTAGTGCTGGTAACTGGTAGACAGCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp CCCAGCACGGCGCACGGCACTCACTCCTGGTCTGACTaGCCTTCAACATTCTCTCCTGAGTCCATTCCTTCC +
Preference number: 3 (lower is better)
Translates to: PSTAHGTHSWSD*PSTFSPESIPS
Trigger: GGAAGGAATGGACTCAGGAGAGAATGTTGAAGGCCAGTCAGACCAGGAGTGAGTGCCGTGCGCCGTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCCTGAAACAATGTTTTaGATAAACTTGCCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGPETMF*INLPFS
Trigger: GGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGG...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR CAA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCCCCCAGCCCACTTCATaGGCGAATGCCAGCCTCCCC +
Preference number: 3 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIPQPTS*ANASLP
Trigger: GGGGAGGCTGGCATTCGCCAATGAAGTGGGCTGGGG...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGGTCACCAGGAAACCCTaGCTGGCGGAAGCCCCTTCC +
Preference number: 3 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGVTRKP*LAEAPS
Trigger: GGAAGGGGCTTCCGCCAGCAAGGGTTTCCTGGTGAC...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp ATCAGACAGCAGAAACACTCCCCGCTGGAGAGCCACGAGGCTCTCGGTCAACATACGCCGTCCAGACACTaGTCACCCAGGTTGAGCTCT +
Preference number: 3 (lower is better)
Translates to: IRQQKHSPLESHEALGQHTPSRH*SPRLSS
Trigger: AGAGCTCAACCTGGGTGACAAGTGTCTGGACGGCGT...ATGTTGACCGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCTGCTGTCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315585.11
3UTR GCA 72 bp TTCTGGTGGCCCTGCAGGGAGATCTGTTTTCTTTTCTaGTTCGACAGCCTGCCCTCCTCTCCTGGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: FWWPCREICFLF*FDSLPSSPGWR
Trigger: CCTCCAGCCAGGAGAGGAGGGCAGGCTGTCGAAGCAGAAAAGAAAACAGATCTCCCTGCAGGGCCACCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp CAGGGCTCCAAAACCACCACAGCCGGTCAGTTTTGCTaGGTGGGATGGCTGGGTCTTGAGGACGAGGAAGTA +
Preference number: 3 (lower is better)
Translates to: QGSKTTTAGQFC*VGWLGLEDEEV
Trigger: TACTTCCTCGTCCTCAAGACCCAGCCATCCCACCCAGCAAAACTGACCGGCTGTGGTGGTTTTGGAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GGGCTGGTACCTGAGGGGCTGTTTGTGAGAATTAGCTaGTTCGGTGGAGAAGCAGAGGAACACCTGAGGGGC +
Preference number: 3 (lower is better)
Translates to: GLVPEGLFVRIS*FGGEAEEHLRG
Trigger: GCCCCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCCCTCAGGTACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GCAACCCTGGGGAGGCTCGCTGCTATTTCAGGCCGATaGTTGAGGGAGGACTTCTCAGGAGAATGTGAGCCA +
Preference number: 3 (lower is better)
Translates to: ATLGRLAAISGR*LREDFSGECEP
Trigger: TGGCTCACATTCTCCTGAGAAGTCCTCCCTCAACCATCGGCCTGAAATAGCAGCGAGCCTCCCCAGGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGAACACCTTGACGTGCTaGTCTCTGTATTTTAAAAAC +
Preference number: 3 (lower is better)
Translates to: VSAADATTSPAQRSPGGRNTLTC*SLYFKN
Trigger: GTTTTTAAAATACAGAGACAAGCACGTCAAGGTGTT...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR CAA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGCCTGAAACAATGTTTTaGATAAACTTGCCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGPETMF*INLPFS
Trigger: GGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGG...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
3UTR-3UTR CAA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCACAGTGGGCCAGGAGTaGGACTTCTCTGAAGGACTA +
Preference number: 3 (lower is better)
Translates to: PDFLAAVRSYDRGHPREATVGQE*DFSEGL
Trigger: TAGTCCTTCAGAGAAGTCCAACTCCTGGCCCACTGT...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp TGCAGAGGGAGGGGCTGGTACCTGAGGGGCTGTTTGTaGGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAAC +
Preference number: 3 (lower is better)
Translates to: CRGRGWYLRGCL*ELAGSVEKQRN
Trigger: GTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCCCTCAGGTACCAGCCCCTCCCTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp CCCTGGGGAGGCTCGCTGCTATTTCAGGCCGATGGTTaGGGGAGGACTTCTCAGGAGAATGTGAGCCAACAA +
Preference number: 3 (lower is better)
Translates to: PWGGSLLFQADG*GRTSQENVSQQ
Trigger: TTGTTGGCTCACATTCTCCTGAGAAGTCCTCCCTCAACCATCGGCCTGAAATAGCAGCGAGCCTCCCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp CGCGGTCACTCACCGGTTAGCAAGGAGCGACTAACTTaGCGGCCACGTCGAGGGTTAGCAGTTTTGGACATT +
Preference number: 3 (lower is better)
Translates to: RGHSPVSKERLT*RPRRGLAVLDI
Trigger: AATGTCCAAAACTGCTAACCCTCGACGTGGCCGCCAAGTTAGTCGCTCCTTGCTAACCGGTGAGTGACCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
3UTR TCA 72 bp TATTCTCTTGCAGTTCTGGAGCTCGGAAGTCCAAAATaGAGGGGCAGGCAGGGCTGGTTCCTTCTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: YSLAVLELGSPK*RGRQGWFLLVA
Trigger: GGCCACCAGAAGGAACCAGCCCTGCCTGCCCCTTCATTTTGGACTTCCGAGCTCCAGAACTGCAAGAGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp AGGACCAATGCACGCACAGATCTGGGAGAAGAGCAGTaGGGTGAGGGGGCAACAATCAGAGCCACAAGAAGC +
Preference number: 3 (lower is better)
Translates to: RTNARTDLGEEQ*GEGATIRATRS
Trigger: GCTTCTTGTGGCTCTGATTGTTGCCCCCTCACCTCACTGCTCTTCTCCCAGATCTGTGCGTGCATTGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp GCAGGCCACAGCAGTAACACAGAACGGTGTCTCCCGTaGCTCTGTAATCAGACAGCAGAAACACTCCCCGCT +
Preference number: 3 (lower is better)
Translates to: AGHSSNTERCLP*LCNQTAETLPA
Trigger: AGCGGGGAGTGTTTCTGCTGTCTGATTACAGAGTCACGGGAGACACCGTTCTGTGTTACTGCTGTGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
3UTR CCA 72 bp AAAACCACCACAGCCGGTCAGTTTTGCTGGGTGGGATaGCTGGGTCTTGAGGACGAGGAAGTACAGAAGCTC +
Preference number: 3 (lower is better)
Translates to: KTTTAGQFCWVG*LGLEDEEVQKL
Trigger: GAGCTTCTGTACTTCCTCGTCCTCAAGACCCAGCCATCCCACCCAGCAAAACTGACCGGCTGTGGTGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GACGGGGACATGGCTCAGCCCACCACGGAGTGTCAATaGTATCCAGCATGTGGGGTTTGCCAAACAACAACA +
Preference number: 3 (lower is better)
Translates to: DGDMAQPTTECQ*YPACGVCQTTT
Trigger: TGTTGTTGTTTGGCAAACCCCACATGCTGGATACCATTGACACTCCGTGGTGGGCTGAGCCATGTCCCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCCTGAAACAATGTTTTaGATAAACTTGCCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGPETMF*INLPFS
Trigger: GGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGG...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR CAA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGCCCAGCAGCAGGATATaGTGTACGTCCTGTAGGCTG +
Preference number: 3 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRPSSRI*CTSCRL
Trigger: CAGCCTACAGGACGTACACAATATCCTGCTGCTGGG...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp CTCACGGAAGCTGCGCAGGCCACAGCAGTAACACAGAACGGTGTCTCCCGTGACATGTCAAACCTCTGGTaGCCAGGTAATTCTTCAGGA +
Preference number: 3 (lower is better)
Translates to: LTEAAQATAVTQNGVSRDMSNLW*PGNSSG
Trigger: TCCTGAAGAATTACCTGGCAACCAGAGGTTTGACAT...GTCACGGGAGACACCGTTCTGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000535527.5
3UTR TCA 72 bp GTTGTGGCTTCCCAGCATTGGCAGAATGAAGAGACCTaGGCAGGTTTCACAGGAGTCACTGAGGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: VVASQHWQNEET*AGFTGVTEGQQ
Trigger: CTGCTGTCCCTCAGTGACTCCTGTGAAACCTGCTCAGGTCTCTTCATTCTGCCAATGCTGGGAAGCCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp TTCCGGATACTTCCGTTACCTCAGAAGGATCCTTCTTaGATTCACTCCCTATCCCCTCCACCCAGCCCGACA +
Preference number: 3 (lower is better)
Translates to: FRILPLPQKDPS*IHSLSPPPSPT
Trigger: TGTCGGGCTGGGTGGAGGGGATAGGGAGTGAATGCAAGAAGGATCCTTCTGAGGTAACGGAAGTATCCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGAACACCTTGACGTGCTaGTCTCTGTATTTTAAAAAC +
Preference number: 3 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGNTLTC*SLYFKN
Trigger: GTTTTTAAAATACAGAGACAAGCACGTCAAGGTGTT...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR CAA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAATGTTTTTGATAAACTaGCCCTTCTCCCTTGAAACT +
Preference number: 3 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKMFLIN*PFSLET
Trigger: AGTTTCAAGGGAGAAGGGCAAGTTTATCAAAAACAT...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR CAA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCCCTGAAACAATGTTTTaGATAAACTTGCCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: RAPVGDPASLPSGGCENTPETMF*INLPFS
Trigger: GGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGG...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR CCA 72 bp CCTCAGTCTGTTTTAAGCCAATCTGCCCAGACTTCCTaGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCA +
Preference number: 3 (lower is better)
Translates to: PQSVLSQSAQTS*LQSEAMTEAIP
Trigger: TGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGGGCAGATTGGCTTAAAACAGACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp ATCAGCTCATCAGACCTTCACCGTTCAGTAGCCAACTaGTCAGTGATCAGTAGATGCTGCCCTGGGGCCAAA +
Preference number: 3 (lower is better)
Translates to: ISSSDLHRSVAN*SVISRCCPGAK
Trigger: TTTGGCCCCAGGGCAGCATCTACTGATCACTGACCAGTTGGCTACTGAACGGTGAAGGTCTGATGAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAATGTTTTTGATAAACTaGCCCTTCTCCCTTGAAACT +
Preference number: 3 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSMFLIN*PFSLET
Trigger: AGTTTCAAGGGAGAAGGGCAAGTTTATCAAAAACAT...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
3UTR-3UTR CAA 90 bp CTCACGGAAGCTGCGCAGGCCACAGCAGTAACACAGAACGGTGTCTCCCGTGACAACACCTTGACGTGCTaGTCTCTGTATTTTAAAAAC +
Preference number: 3 (lower is better)
Translates to: LTEAAQATAVTQNGVSRDNTLTC*SLYFKN
Trigger: GTTTTTAAAATACAGAGACAAGCACGTCAAGGTGTT...GTCACGGGAGACACCGTTCTGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR CAA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCAACACCTTGACGTGCTaGTCTCTGTATTTTAAAAAC +
Preference number: 3 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPNTLTC*SLYFKN
Trigger: GTTTTTAAAATACAGAGACAAGCACGTCAAGGTGTT...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
3UTR-3UTR CAA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCCCTGAAACAATGTTTTaGATAAACTTGCCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAPETMF*INLPFS
Trigger: GGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGG...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGCCCAGCAGCAGGATATaGTGTACGTCCTGTAGGCTG +
Preference number: 3 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRPSSRI*CTSCRL
Trigger: CAGCCTACAGGACGTACACAATATCCTGCTGCTGGG...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp TTCCACAGACATGCACGACCAAGTGTCTGCTCTGTGTaGGGAACTTTAAGACCCCACCATCTAGACTCACCG +
Preference number: 3 (lower is better)
Translates to: FHRHARPSVCSV*GTLRPHHLDSP
Trigger: CGGTGAGTCTAGATGGTGGGGTCTTAAAGTTCCTCACACAGAGCAGACACTTGGTCGTGCATGTCTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp GTTGGCCTGAATCCCTCAGTCTGTTTTAAGCCAATCTaGCCAGACTTCCTGGCTGCAGTCAGAAGCTATGAC +
Preference number: 3 (lower is better)
Translates to: VGLNPSVCFKPI*PDFLAAVRSYD
Trigger: GTCATAGCTTCTGACTGCAGCCAGGAAGTCTGGGCAGATTGGCTTAAAACAGACTGAGGGATTCAGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp GTGCAGTTCAGCGACTGTAGTAAATGTGCAGAGCTGTaGACCCATCACTCCAACCCAGTTTCCGGATACTTC +
Preference number: 3 (lower is better)
Translates to: VQFSDCSKCAEL*THHSNPVSGYF
Trigger: GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACTACAGTCGCTGAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp TCAGCACGTTTCCTCGCTGCACGATACTCCAGTGTCTaGATACACCCATTTTGTCTGTCCATGCATCAGCTG +
Preference number: 3 (lower is better)
Translates to: SARFLAARYSSV*IHPFCLSMHQL
Trigger: CAGCTGATGCATGGACAGACAAAATGGGTGTATCCAGACACTGGAGTATCGTGCAGCGAGGAAACGTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp ACAAACTCAGGGTCTCTGCATTGTGGCTTCTTCTGGTaGTCAGCTGAAGACAAAGCCTCCACACTGGATGAA +
Preference number: 3 (lower is better)
Translates to: TNSGSLHCGFFW*SAEDKASTLDE
Trigger: TTCATCCAGTGTGGAGGCTTTGTCTTCAGCTGAGCACCAGAAGAAGCCACAATGCAGAGACCCTGAGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCATGTTTTTGATAAACTaGCCCTTCTCCCTTGAAACT +
Preference number: 3 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFMFLIN*PFSLET
Trigger: AGTTTCAAGGGAGAAGGGCAAGTTTATCAAAAACAT...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp AGAATATGCAAAAGAGAGGACTTTCCTCCACAAATACAGATTGCTGCTTCTCAGCAAGGAGCGACTAACTaGGCGGCCACGTCGAGGGTT +
Preference number: 3 (lower is better)
Translates to: RICKREDFPPQIQIAASQQGATN*AATSRV
Trigger: AACCCTCGACGTGGCCGCCAAGTTAGTCGCTCCTTG...CTGAGAAGCAGCAATCTGTATTTGTGGAGGAAAGTCCTCTCTTTTGCATATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
3UTR-3UTR CAA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCAAAAACCACCCTGATTaGAAGCATTTACCAATTTCC +
Preference number: 3 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFKNHPD*KHLPIS
Trigger: GGAAATTGGTAAATGCTTCAAATCAGGGTGGTTTTT...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAATGAATCTGGGATGTTaGAACACCAAGTGGAGCCAT +
Preference number: 3 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLMNLGC*NTKWSH
Trigger: ATGGCTCCACTTGGTGTTCAAACATCCCAGATTCAT...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp TGTCCTCGCAGGAAGAGATTAGGGCACAAACACGCATaGAGAGAAGATGACGTGAGAACTCAAGGAGATGCT +
Preference number: 3 (lower is better)
Translates to: CPRRKRLGHKHA*REDDVRTQGDA
Trigger: AGCATCTCCTTGAGTTCTCACGTCATCTTCTCTTCATGCGTGTTTGTGCCCTAATCTCTTCCTGCGAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp CAACATTCTCTCCTGAGTCCATTCCTTCCACAGACATaGACGACCAAGTGTCTGCTCTGTGTGAGGAACTTT +
Preference number: 3 (lower is better)
Translates to: QHSLLSPFLPQT*TTKCLLCVRNF
Trigger: AAAGTTCCTCACACAGAGCAGACACTTGGTCGTGCATGTCTGTGGAAGGAATGGACTCAGGAGAGAATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp AGCCCTAAATCCCAGGACCTCAGAGGTGACTGTATCTaGAGACATGGAACACGTCATGAATTTGGGTGTCAT +
Preference number: 3 (lower is better)
Translates to: SPKSQDLRGDCI*RHGTRHEFGCH
Trigger: ATGACACCCAAATTCATGACGTGTTCCATGTCTGCAGATACAGTCACCTCTGAGGTCCTGGGATTTAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGAGGGTTAGCAGTTTaGGACATTGGAAGGTTTCTT +
Preference number: 3 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFRGLAV*DIGRFL
Trigger: AAGAAACCTTCCAATGTCCAAAACTGCTAACCCTCG...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAACAGGGCAAGTGTTCTaGTTTCTACTTTTTGGAGAT +
Preference number: 3 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLTGQVF*FLLFGD
Trigger: ATCTCCAAAAAGTAGAAACAAGAACACTTGCCCTGT...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp AGGCAGGGGTCATACATGCTGGGCCTTCAAGGGCCATaGTATGGTTATCATTACTATGTAATAAACCACCCC +
Preference number: 3 (lower is better)
Translates to: RQGSYMLGLQGP*YGYHYYVINHP
Trigger: GGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCTTGAAGGCCCAGCATGTATGACCCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GGAACACGTCATGAATTTGGGTGTCATGCCTGCACGTaGGCCATGCTAATCTTCTCTATATCGTTCCAGTTT +
Preference number: 3 (lower is better)
Translates to: GTRHEFGCHACT*AMLIFSISFQF
Trigger: AAACTGGAACGATATAGAGAAGATTAGCATGGCCCACGTGCAGGCATGACACCCAAATTCATGACGTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp CTTGTTTCTACTTTTTGGAGATGGGAAGGGGAAGAGTaGGTATCAACCGATCTCTCTAAGACACAGACGCAG +
Preference number: 3 (lower is better)
Translates to: LVSTFWRWEGEE*VSTDLSKTQTQ
Trigger: CTGCGTCTGTGTCTTAGAGAGATCGGTTGATACTCACTCTTCCCCTTCCCATCTCCAAAAAGTAGAAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR GCA 72 bp CTCATGATTATATGCTGGCTGCCTGGTGCAGCACTGTaGTGGTGTTTAACAACCTTCTCTTCAGAAGAAAAC +
Preference number: 3 (lower is better)
Translates to: LMIICWLPGAAL*WCLTTFSSEEN
Trigger: GTTTTCTTCTGAAGAGAAGGTTGTTAAACACCAGCACAGTGCTGCACCAGGCAGCCAGCATATAATCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp TGTATTTTAAAAACACGCTCTCTTCACCTCCAGTGCTaGAAGCTGCTCAGGGCCTCTGGATGCTTAGTTTTT +
Preference number: 3 (lower is better)
Translates to: CILKTRSLHLQC*KLLRASGCLVF
Trigger: AAAAACTAAGCATCCAGAGGCCCTGAGCAGCTTTCAGCACTGGAGGTGAAGAGAGCGTGTTTTTAAAATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
3UTR GCA 72 bp CTACTTATTTCTCATGATTATATGCTGGCTGCCTGGTaGAGCACTGTGCTGGTGTTTAACAACCTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: LLISHDYMLAAW*STVLVFNNLLF
Trigger: GAAGAGAAGGTTGTTAAACACCAGCACAGTGCTGCACCAGGCAGCCAGCATATAATCATGAGAAATAAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp CAACTACTTATTTCTCATGATTATATGCTGGCTGCCTaGTGCAGCACTGTGCTGGTGTTTAACAACCTTCTC +
Preference number: 3 (lower is better)
Translates to: QLLISHDYMLAA*CSTVLVFNNLL
Trigger: GAGAAGGTTGTTAAACACCAGCACAGTGCTGCACCAGGCAGCCAGCATATAATCATGAGAAATAAGTAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GGGGTCATACATGCTGGGCCTTCAAGGGCCATGATATaGTTATCATTACTATGTAATAAACCACCCCAAATG +
Preference number: 3 (lower is better)
Translates to: GVIHAGPSRAMI*LSLLCNKPPQM
Trigger: CATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCTTGAAGGCCCAGCATGTATGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR TCA 72 bp AACTGGAATGTTCCTAACAAAGAAATGATACAGGCTTaGGGTGATGGATACCCCAGTTACTGGGAGTTGATC +
Preference number: 3 (lower is better)
Translates to: NWNVPNKEMIQA*GDGYPSYWELI
Trigger: GATCAACTCCCAGTAACTGGGGTATCCATCACCTCAAGCCTGTATCATTTCTTTGTTAGGAACATTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp ATGATTATATGCTGGCTGCCTGGTGCAGCACTGTGCTaGTGTTTAACAACCTTCTCTTCAGAAGAAAACAAA +
Preference number: 3 (lower is better)
Translates to: MIICWLPGAALC*CLTTFSSEENK
Trigger: TTTGTTTTCTTCTGAAGAGAAGGTTGTTAAACACCAGCACAGTGCTGCACCAGGCAGCCAGCATATAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR CCA 72 bp GGCTTAAACAACTACTTATTTCTCATGATTATATGCTaGCTGCCTGGTGCAGCACTGTGCTGGTGTTTAACA +
Preference number: 3 (lower is better)
Translates to: GLNNYLFLMIIC*LPGAALCWCLT
Trigger: TGTTAAACACCAGCACAGTGCTGCACCAGGCAGCCAGCATATAATCATGAGAAATAAGTAGTTGTTTAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp AGGGCCATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGAAGTGTAGAGGATGCTaGAATAATGGCTGTCTACCA +
Preference number: 3 (lower is better)
Translates to: RAMIWLSLLCNKPPQMQWKCRGC*NNGCLP
Trigger: TGGTAGACAGCCATTATTCAAGCATCCTCTACACTT...CCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
3UTR-3UTR CAA 90 bp TGCTTGTCTCTGTATTTTAAAAACACGCTCTCTTCACCTCCAGTGCTGAAAGCTAACACCTTGACGTGCTaGTCTCTGTATTTTAAAAAC +
Preference number: 3 (lower is better)
Translates to: CLSLYFKNTLSSPPVLKANTLTC*SLYFKN
Trigger: GTTTTTAAAATACAGAGACAAGCACGTCAAGGTGTT...AGCTTTCAGCACTGGAGGTGAAGAGAGCGTGTTTTTAAAATACAGAGACAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCAGCCGTCCCCAGGGCTaGGGCGGCGGCGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPSRPQG*GGGDCL
Trigger: CAAGCAGTCGCCGCCGCCGCAGCCCTGGGGACGGCT...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCAGACCGCACACTGCTaGGGGGCGACACGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPQTAHC*GATRGS
Trigger: GGACCCGCGTGTCGCCCCTCAGCAGTGTGCGGTCTG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
76% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCTGCCACCACGAGCCCTaGCCAGCGCTCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPCHHEP*PALTRR
Trigger: CCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCA...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCCGGCTCCGTCCTGCTaGTGGTCAGCGCGCGGATCT +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPPAPSC*WSARGS
Trigger: AGATCCGCGCGCTGACCAGCAGCAGGACGGAGCCGG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
74% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCTTCCTCAGGAGGACGTaGGGCTCGCCCTCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAAFLRRT*GSPSSA
Trigger: CGCGGAGGAGGGCGAGCCGCACGTCCTCCTGAGGAA...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCACCTGTCGGAGACCCTaGGTCCCTTCCCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPTCRRP*VPSLRG
Trigger: CCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGT...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR CCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCGGTCGGGCATGGGCTaGAAGCAGCAGGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPRSGMG*KQQVHR
Trigger: CCTGTGCACCTGCTGCTTCCAGCCCATGCCCGACCG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCTGGCTTGGAGCCTaGGCAGCACACGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAAPWLGA*AAHGGV
Trigger: CACCCCTCCGTGTGCTGCCCAGGCTCCAAGCCAGGG...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCTCCCAGCCGCTGCTCTaGCGTCCTCGTGGACGGTTT +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPSQPLL*RPRGRF
Trigger: AAACCGTCCACGAGGACGTCAGAGCAGCGGCTGGGA...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCTGCTGTCGTCAGGCTaGCGGACGTGGAGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPLLSSG*RTWRVH
Trigger: ATGCACCCTCCACGTCCGTCAGCCTGACGACAGCAG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGAGCCGTCCCCAGGGCTaGGGCGGCGGCGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRSRPQG*GGGDCL
Trigger: CAAGCAGTCGCCGCCGCCGCAGCCCTGGGGACGGCT...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCGACACGCGGGTCCTaGTCGCGCTCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRATRGS*SRSALR
Trigger: CCGGAGAGCGGAGCGCGAGCAGGACCCGCGTGTCGC...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCAGATGAGGAGTGCGTaGGGAGACGGTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPQMRSA*GDGLWG
Trigger: GCCCCACAGACCGTCTCCCCACGCACTCCTCATCTG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCGGAGTTGCTGGGCGTaGCGGCTTACGCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPRSCWA*RLTPGI
Trigger: GATTCCAGGCGTAAGCCGCCACGCCCAGCAACTCCG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCAGGAGAAGGCTCCGTaGAAGAGGCCGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPQEKAP*KRPRLW
Trigger: CCACAGCCTCGGCCTCTTCCACGGAGCCTTCTCCTG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000432561.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCTTCGTCTCTGCTGCTaGTGCCACCACGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAALRLCC*CHHEPC
Trigger: GCAGGGCTCGTGGTGGCATCAGCAGCAGAGACGAAG...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR TCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCCTGCAGGAGCTGAATaGGGAGAGGCTGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPPAGAE*GEAAEG
Trigger: TCCCTCTGCAGCCTCTCCTCATTCAGCTCCTGCAGG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGGCGACACGCGGGTCCTaGTCGCGCTCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGATRGS*SRSALR
Trigger: CCGGAGAGCGGAGCGCGAGCAGGACCCGCGTGTCGC...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCAGGTGGCAGAAAGGCTaGAGGCAGACCGCACACTGC +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPRWQKG*RQTAHC
Trigger: GCAGTGTGCGGTCTGCCTGCAGCCTTTCTGCCACCT...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCACTCTGCATGGGGCCTaGCTCCCTCGCATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAATLHGA*LPRMGK
Trigger: CTTCCCCATGCGAGGGAGGCAGGCCCCATGCAGAGT...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCACTCGGAGCTCACTCTaGATGGGGCCTGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAATRSSL*MGPASL
Trigger: GAGGGAGGCAGGCCCCATGCAGAGTGAGCTCCGAGT...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCAGAAACACTCCCCGCTaGAGAGCCACGAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPRNTPR*RATRLS
Trigger: CGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCT...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR CCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCCCAGCCCACTTCATTaGCGAATGCCAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPPSPLH*RMPASP
Trigger: AGGGGAGGCTGGCATTCGCCAATGAAGTGGGCTGGG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
71% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCAGATGAGGAGTGCGTaGGGAGACGGTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAAQMRSA*GDGLWG
Trigger: GCCCCACAGACCGTCTCCCCACGCACTCCTCATCTG...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCTCACTGTCAACGTCTaGCAGCTCCAGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPLTVNV*QLQQVL
Trigger: GAGGACCTGCTGGAGCTGTCAGACGTTGACAGTGAG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCTCCAACCAGGCCAACTaGGCTGAGTGGGTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPSNQAN*AEWVRL
Trigger: CAGCCTTACCCACTCAGCTCAGTTGGCCTGGTTGGA...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCTAGAGCTACAGGGTaGAGGAACGTGCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAAPRATG*RNVLGS
Trigger: GCTCCCCAGCACGTTCCTTCACCCTGTAGCTCTAGG...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGGACGGACGTGGAGGGTaGATCCCCCAGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGDGRGG*IPQGLW
Trigger: CCACAGGCCCTGGGGGATGCACCCTCCACGTCCGTC...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGGCGCGTCCTGGGACCTaGCTCCAGCCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGARPGT*LQPWAW
Trigger: CCAAGCCCAGGGCTGGAGGCAGGTCCCAGGACGCGC...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCTCACCAGGAAACCCTTaGTGGCGGAAGCCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPSPGNP*WRKPLP
Trigger: TGGAAGGGGCTTCCGCCAGCAAGGGTTTCCTGGTGA...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGCACCCGGCTCCGTCCTaGTGCTGGTCAGCGCGCGGA +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGHPAPS*CWSARG
Trigger: TCCGCGCGCTGACCAGCAGCAGGACGGAGCCGGGTG...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCTTGGGTGCTCAGCCATaGCCCACACTCCACCTCCAA +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPLGAQP*PTLHLQ
Trigger: TTGGAGGTGGAGTGTGGGGCATGGCTGAGCACCCAA...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCAGAAACACTCCCCGCTaGAGAGCCACGAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAARNTPR*RATRLS
Trigger: CGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCT...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR CCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGGCTGGGAGCAGCCCCTaGACCCCGGCTCTCACACCT +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGAGSSP*TPALTP
Trigger: AGGTGTGAGAGCCGGGGTCCAGGGGCTGCTCCCAGC...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCAGGGCTGGTTCCTTCTaGTGGCCCTGCAGGGAGATC +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAARAGSF*WPCREI
Trigger: GATCTCCCTGCAGGGCCACCAGAAGGAACCAGCCCT...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCTCTGTCTGGGAGAGCTaGGGCAAAGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPSVWES*GKAGDF
Trigger: GAAGTCTCCAGCTTTGCCTCAGCTCTCCCAGACAGA...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCTTCACCTCCAGTGCTaGAAGCTGCTCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAALHLQC*KLLRAS
Trigger: AGAGGCCCTGAGCAGCTTTCAGCACTGGAGGTGAAG...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR TCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGATCTCCTGACCTCGTaGTCCGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRADLLTS*SARLSL
Trigger: GAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATC...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGGACAGCCAGCAGGATaGCTCCTGGGGTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRGQPAG*LLGLGL
Trigger: CAGGCCCAACCCCAGGAGTCATCCTGCTGGCTGTCC...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAATGCGGCGGCGGCGACTaGTTGCCTTCCTCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKCGGGD*LPSSGR
Trigger: GCGGCCCGAGGAAGGCAAGCAGTCGCCGCCGCCGCA...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCGCAGAACGTGTGCATaGAGGGCTGCAAACTCACGC +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAARRTCA*RAANSR
Trigger: GCGTGAGTTTGCAGCCCTGCATGCACACGTTCTGCG...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGGACGGACGTGGAGGGTaGATCCCCCAGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGDGRGG*IPQGLW
Trigger: CCACAGGCCCTGGGGGATGCACCCTCCACGTCCGTC...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGCGACACGCGGGTCCTaGTCGCGCTCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGATRGS*SRSALR
Trigger: CCGGAGAGCGGAGCGCGAGCAGGACCCGCGTGTCGC...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGACCTGTCGGAGACCCTaGGTCCCTTCCCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRTCRRP*VPSLRG
Trigger: CCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGT...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCCTTCCAAACTCAGCTaGCTCTCTGCCTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPPSKLS*LSALAT
Trigger: TGTGGCCAAGGCAGAGAGGCAGCTGAGTTTGGAAGG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCTCGTGCAGCAGGTCCTaGCAGATGATGCATGTCAGC +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPSCSRS*QMMHVS
Trigger: GCTGACATGCATCATCTGCCAGGACCTGCTGCACGA...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGTCGGGTGCTGGGCAGTaGGGAGGCTGCGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGSGAGQ*GGCAAC
Trigger: GCAGGCGGCGCAGCCTCCCCACTGCCCAGCACCCGA...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCTCGCCCTCGGGTGCTaGGCAGTGGGGAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGLALGC*AVGRLR
Trigger: GCGCAGCCTCCCCACTGCCCAGCACCCGAGGGCGAG...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTCGGTCGGGCATGGGCTaGAAGCAGCAGGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRARSGMG*KQQVHR
Trigger: CCTGTGCACCTGCTGCTTCCAGCCCATGCCCGACCG...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGCTCTCCGGTCGGGCATaGGCTGGAAGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRLSGRA*AGSSRC
Trigger: GCACCTGCTGCTTCCAGCCCATGCCCGACCGGAGAG...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAGGGAGCGGCGCGTCCTaGGACCTGCCTCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKGSGAS*DLPPAL
Trigger: CAGGGCTGGAGGCAGGTCCCAGGACGCGCCGCTCCC...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCACGGCACTCACTCCTaGTCTGACTGGCCTTCAACA +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPHGTHS*SDWPST
Trigger: TGTTGAAGGCCAGTCAGACCAGGAGTGAGTGCCGTG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGTCCCAGCCGCTGCTCTaGCGTCCTCGTGGACGGTTT +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRSQPLL*RPRGRF
Trigger: AAACCGTCCACGAGGACGTCAGAGCAGCGGCTGGGA...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCAGGGCCCGGGCAGCATaGGGGAGCGGCGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASRARAA*GSGASW
Trigger: CCAGGACGCGCCGCTCCCTCATGCTGCCCGGGCCCT...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCTGCGGCGGCGGCGACTaGTTGCCTTCCTCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTCGGGD*LPSSGR
Trigger: GCGGCCCGAGGAAGGCAAGCAGTCGCCGCCGCCGCA...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCGGAGACTTCATCACTTaGCACAGAGGGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPGDFIT*HRGTTS
Trigger: GGAAGTGGTCCCTCTGTGGCAAGTGATGAAGTCTCC...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGCGACACGCGGGTCCTaGTCGCGCTCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTATRGS*SRSALR
Trigger: CCGGAGAGCGGAGCGCGAGCAGGACCCGCGTGTCGC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCTTCTCTACACGGCTaGAGCCGCCCTCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRAASLHG*SRPQKA
Trigger: CGCCTTCTGAGGGCGGCTGCAGCCGTGTAGAGAAGC...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCAGGAAAGCACTGTCTaGCCGACACACAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAAQESTV*PTHKTG
Trigger: CCCCGTTTTGTGTGTCGGGCAGACAGTGCTTTCCTG...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR CCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGCTCGCCCTCGGGTGCTaGGCAGTGGGGAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRLALGC*AVGRLR
Trigger: GCGCAGCCTCCCCACTGCCCAGCACCCGAGGGCGAG...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGGCCTGTGGGGCTCCTaGCTCGCCCTCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTGLWGS*LALGCW
Trigger: CCAGCACCCGAGGGCGAGCCAGGAGCCCCACAGGCC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGCTCTCCGGTCGGGCATaGGCTGGAAGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGLSGRA*AGSSRC
Trigger: GCACCTGCTGCTTCCAGCCCATGCCCGACCGGAGAG...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCGGCCCCCGGGGCTCTaGGGAGGGTCTCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGRPPGL*GGSHSE
Trigger: CTCTGAGTGAGACCCTCCCCAGAGCCCCGGGGGCCG...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR CCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCCGGCCCCCGGGGCTCTaGGGAGGGTCTCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPRPPGL*GGSHSE
Trigger: CTCTGAGTGAGACCCTCCCCAGAGCCCCGGGGGCCG...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR CCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAACGGCCCCCGGGGCTCTaGGGAGGGTCTCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKRPPGL*GGSHSE
Trigger: CTCTGAGTGAGACCCTCCCCAGAGCCCCGGGGGCCG...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR CCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGAGGGGCAGGCAGGGCTaGTTCCTTCTGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGRGRQG*FLLVAL
Trigger: CAGGGCCACCAGAAGGAACCAGCCCTGCCTGCCCCT...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGCAAAGCACACCTGAGTaGCGGGCGACGACGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRQSTPE*RATTEG
Trigger: TCCCTCCGTCGTCGCCCGCCACTCAGGTGTGCTTTG...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432561.6
ENST00000450056.7
CDS-3UTR TCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGCAGACCGCACACTGCTaGGGGGCGACACGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRQTAHC*GATRGS
Trigger: GGACCCGCGTGTCGCCCCTCAGCAGTGTGCGGTCTG...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR TCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCACAGACCGCACACTGCTaGGGGGCGACACGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSQTAHC*GATRGS
Trigger: GGACCCGCGTGTCGCCCCTCAGCAGTGTGCGGTCTG...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR TCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGACCGCACACTGCTaGGGGGCGACACGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPQTAHC*GATRGS
Trigger: GGACCCGCGTGTCGCCCCTCAGCAGTGTGCGGTCTG...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR TCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCTTCTGGTGCTCAGCTaGAGACAAAGCCTCCACACT +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAALLVLS*RQSLHT
Trigger: AGTGTGGAGGCTTTGTCTTCAGCTGAGCACCAGAAG...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCTGCAGTCAGAAGCTATaGCAGAGGCCATCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAACSQKL*QRPSQR
Trigger: TCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCA...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGCCAGGCCAACTGAGCTaGGTGGGTAAGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRPGQLS*VGKAGR
Trigger: CCTTCCAGCCTTACCCACTCAGCTCAGTTGGCCTGG...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGCCTGCAGGAGCTGAATaGGGAGAGGCTGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRPAGAE*GEAAEG
Trigger: TCCCTCTGCAGCCTCTCCTCATTCAGCTCCTGCAGG...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGAGGAACCGGCCCCGCTaGCACCCTGATCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRRNRPR*HPDLRV
Trigger: AACTCTGAGATCAGGGTGTCAGCGGGGCCGGTTCCT...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGGCCATGCCATCTTCTaGCAGTGGAGAGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRAGHAIF*QWRGQV
Trigger: GACCTGCCCTCTCCACTGTCAGAAGATGGCATGGCC...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTAGGTGGAGGCTGCAGTaGGCTGACATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRARWRLQ*ADIAPL
Trigger: CAGTGGCGCAATGTCAGCTCACTGCAGCCTCCACCT...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTGAACCCGGAACCGGCTaGGCCGCCGCCGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPEPGTG*AAAAVK
Trigger: CTTGACAGCGGCGGCGGCGCAGCCGGTTCCGGGTTC...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTGCGGCGGCGGCGACTaGTTGCCTTCCTCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPACGGGD*LPSSGR
Trigger: GCGGCCCGAGGAAGGCAAGCAGTCGCCGCCGCCGCA...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCAGAGACCAGTTTATTaGTGGGGAAGGAAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPQRPVY*WGRKGR
Trigger: GCGACCTTTCCTTCCCCAGCAATAAACTGGTCTCTG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCGGAGACTTCATCACTTaGCACAGAGGGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAAGDFIT*HRGTTS
Trigger: GGAAGTGGTCCCTCTGTGGCAAGTGATGAAGTCTCC...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGTGGCTTCCCAGCCGCTaGTCTGACGTCCTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGWLPSR*SDVLVD
Trigger: GTCCACGAGGACGTCAGAGCAGCGGCTGGGAAGCCA...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCGACGGACGTGGAGGGTaGATCCCCCAGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPDGRGG*IPQGLW
Trigger: CCACAGGCCCTGGGGGATGCACCCTCCACGTCCGTC...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGAGGTGGCAGAAAGGCTaGAGGCAGACCGCACACTGC +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRRWQKG*RQTAHC
Trigger: GCAGTGTGCGGTCTGCCTGCAGCCTTTCTGCCACCT...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGAGGTGGCAGAAAGGCTaGAGGCAGACCGCACACTGC +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGRWQKG*RQTAHC
Trigger: GCAGTGTGCGGTCTGCCTGCAGCCTTTCTGCCACCT...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGTGCCACCACGAGCCCTaGCCAGCGCTCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGCHHEP*PALTRR
Trigger: CCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCA...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGCGCGTCCTGGGACCTaGCTCCAGCCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSARPGT*LQPWAW
Trigger: CCAAGCCCAGGGCTGGAGGCAGGTCCCAGGACGCGC...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAACTTCAGGGAGCCGGCTaGAGCTGCCTCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKLQGAG*SCLRAS
Trigger: GCTGGCCCTGAGGCAGCTGCAGCCGGCTCCCTGAAG...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGCACCCGGCTCCGTCCTaGTGCTGGTCAGCGCGCGGA +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRHPAPS*CWSARG
Trigger: TCCGCGCGCTGACCAGCAGCAGGACGGAGCCGGGTG...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCCTCTTGTCTGGATGCTaGATGAGGTATGCTTCCACG +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPLLSGC*MRYAST
Trigger: CGTGGAAGCATACCTCATCCAGCATCCAGACAAGAG...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCTCGGGTGCTGGGCAGTaGGGAGGCTGCGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVSGAGQ*GGCAAC
Trigger: GCAGGCGGCGCAGCCTCCCCACTGCCCAGCACCCGA...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGCTCGCCCTCGGGTGCTaGGCAGTGGGGAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPALALGC*AVGRLR
Trigger: GCGCAGCCTCCCCACTGCCCAGCACCCGAGGGCGAG...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTCGCCCTCGGGTGCTaGGCAGTGGGGAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASLALGC*AVGRLR
Trigger: GCGCAGCCTCCCCACTGCCCAGCACCCGAGGGCGAG...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCGGCCTGTGGGGCTCCTaGCTCGCCCTCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASGLWGS*LALGCW
Trigger: CCAGCACCCGAGGGCGAGCCAGGAGCCCCACAGGCC...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTAGAAACACTCCCCGCTaGAGAGCCACGAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRARNTPR*RATRLS
Trigger: CGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCT...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR CCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCGGCCCCCGGGGCTCTaGGGAGGGTCTCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPRPPGL*GGSHSE
Trigger: CTCTGAGTGAGACCCTCCCCAGAGCCCCGGGGGCCG...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCGGGAGCGGCGCGTCCTaGGACCTGCCTCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVGSGAS*DLPPAL
Trigger: CAGGGCTGGAGGCAGGTCCCAGGACGCGCCGCTCCC...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCCCAGCCCACTTCATTaGCGAATGCCAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGPSPLH*RMPASP
Trigger: AGGGGAGGCTGGCATTCGCCAATGAAGTGGGCTGGG...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCTGGGTGGGATGGCTaGGTCTTGAGGACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRAAGWDG*VLRTRK
Trigger: CTTCCTCGTCCTCAAGACCCAGCCATCCCACCCAGC...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCCCCGGCTCTCACACCTaGGCCCGACCACTCCCATCC +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPPGSHT*ARPLPS
Trigger: GGATGGGAGTGGTCGGGCCCAGGTGTGAGAGCCGGG...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGGGTGAAGGAACGTGCTaGGGAGCAGGGGAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGGEGTC*GAGERV
Trigger: CACCCTCTCCCCTGCTCCCCAGCACGTTCCTTCACC...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCAGGTCCTGGCAGATaGTGCATGTCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRAGPGR*CMSASP
Trigger: AGGAGACGCTGACATGCATCATCTGCCAGGACCTGC...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCAGCATTGGCAGAATaGAGAGACCTGAGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAAPALAE*RDLSRF
Trigger: AAACCTGCTCAGGTCTCTTCATTCTGCCAATGCTGG...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCGCCACACCCCTGGGGTaGAGGCCGTGTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPATPLG*RPCGAG
Trigger: CCCAGCACCACACGGCCTTCACCCCAGGGGTGTGGC...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCGAACCCGGAACCGGCTaGGCCGCCGCCGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVEPGTG*AAAAVK
Trigger: CTTGACAGCGGCGGCGGCGCAGCCGGTTCCGGGTTC...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCGCGGCGGCGACTGCTTaGCTTCCTCGGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASAAATA*LPRAAP
Trigger: TGGAGCGGCCCGAGGAAGGCAAGCAGTCGCCGCCGC...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTTTCCTCAGGAGGACGTaGGGCTCGCCCTCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPFLRRT*GSPSSA
Trigger: CGCGGAGGAGGGCGAGCCGCACGTCCTCCTGAGGAA...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCGACGGACGTGGAGGGTaGATCCCCCAGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLDGRGG*IPQGLW
Trigger: CCACAGGCCCTGGGGGATGCACCCTCCACGTCCGTC...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTAGCAGCCGGTCCGGGTaGAGCCCCAGTACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPSSRSG*SPSTGG
Trigger: GCCACCTGTACTGGGGCTGCACCCGGACCGGCTGCT...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCAGCAGCCGGTCCGGGTaGAGCCCCAGTACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTSSRSG*SPSTGG
Trigger: GCCACCTGTACTGGGGCTGCACCCGGACCGGCTGCT...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCACCTGTCGGAGACCCTaGGTCCCTTCCCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPTCRRP*VPSLRG
Trigger: CCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGT...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCGCGCGTCCTGGGACCTaGCTCCAGCCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFARPGT*LQPWAW
Trigger: CCAAGCCCAGGGCTGGAGGCAGGTCCCAGGACGCGC...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCACCGGCTCCGTCCTGCTaGTGGTCAGCGCGCGGATCT +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSPAPSC*WSARGS
Trigger: AGATCCGCGCGCTGACCAGCAGCAGGACGGAGCCGG...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGGAGTGCAGTGGTaGGATCTCGGTTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRAAGVQW*DLGSLQ
Trigger: TTGCAGTGAACCGAGATCGCACCACTGCACTCCCGC...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGCTGGCTGGAGGCCCTTaGTCCCTCTGCAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRLAGGP*SLCKAH
Trigger: ATGTGCTTTGCAGAGGGAGCAAGGGCCTCCAGCCAG...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGGAAGCGGATGTTGGGTaGTCAGCCATGCCCCACACT +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGEADVG*SAMPHT
Trigger: AGTGTGGGGCATGGCTGAGCACCCAACATCCGCTTC...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCTGTTCCACTGGTGCTaGTATCTTCCAGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAALFHWC*YLPVSP
Trigger: AGGTGACACTGGAAGATACCAGCACCAGTGGAACAG...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTCCTCCATCTTGTCTaGCTTCCCAGCCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGLLHLV*LPSRCS
Trigger: AGAGCAGCGGCTGGGAAGCCAGACAAGATGGAGGAG...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCCTCTCCGGTCGGGCATaGGCTGGAAGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPLSGRA*AGSSRC
Trigger: GCACCTGCTGCTTCCAGCCCATGCCCGACCGGAGAG...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CTCACGGAAGCTGCGCAGGCCACAGCAGTAACACAGAACGGTGTCTCCCGTGACCGGCCCCCGGGGCTCTaGGGAGGGTCTCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: LTEAAQATAVTQNGVSRDRPPGL*GGSHSE
Trigger: CTCTGAGTGAGACCCTCCCCAGAGCCCCGGGGGCCG...GTCACGGGAGACACCGTTCTGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000544093.5
CDS-3UTR CCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCTGGGGAGACGGTCTGTaGGGCCAGCGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTWGDGL*GQRAAA
Trigger: TGCAGCTGCCCGCTGGCCCCACAGACCGTCTCCCCA...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCCCTGGCTTGGAGCCTaGGCAGCACACGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPPWLGA*AAHGGV
Trigger: CACCCCTCCGTGTGCTGCCCAGGCTCCAAGCCAGGG...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCACCCGGCTCTCACACCTaGGCCCGACCACTCCCATCC +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSPGSHT*ARPLPS
Trigger: GGATGGGAGTGGTCGGGCCCAGGTGTGAGAGCCGGG...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGAAAACGGAGCCCACGTaGAGGCAGAGGGCGGGCACG +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGKTEPT*RQRAGT
Trigger: CGTGCCCGCCCTCTGCCTCCACGTGGGCTCCGTTTT...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCGCTCCGTCCTGCTGCTaGTCAGCGCGCGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPAPSCC*SARGSA
Trigger: TGCAGATCCGCGCGCTGACCAGCAGCAGGACGGAGC...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGGCGGGACGGGGACATaGCTCAGCCCACCACGGAGT +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTGGTGT*LSPPRS
Trigger: ACTCCGTGGTGGGCTGAGCCATGTCCCCGTCCCGCC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCTCTTCCAGTGTCACCTaGCCTGATTTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPSSSVT*PDFSST
Trigger: AGTGGATGAAAAATCAGGTCAGGTGACACTGGAAGA...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGGGCTCCAAATCCTCCTaGTCCTGGGGTTCCAACGAC +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGGSKSS*SWGSND
Trigger: GTCGTTGGAACCCCAGGATCAGGAGGATTTGGAGCC...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGTCCCTCAGGGGGCTGTaGAAACACCTTGACGTGCTT +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGSLRGL*KHLDVL
Trigger: AAGCACGTCAAGGTGTTTTCACAGCCCCCTGAGGGA...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR TCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCTTCGTCTCTGCTGCTaGTGCCACCACGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGLRLCC*CHHEPC
Trigger: GCAGGGCTCGTGGTGGCATCAGCAGCAGAGACGAAG...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR TCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGAGCCTCCACACTGGATaGACAGGTTGTGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGSLHTG*TGCGFP
Trigger: TGGGAAGCCACAACCTGTTCATCCAGTGTGGAGGCT...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGGACAACCGTGAAAAGTaGGCGACAGAGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGDNREK*ATEEGA
Trigger: CGCCCCTTCCTCTGTCGCTCACTTTTCACGGTTGTC...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCGAAGAGAAGATGACGTaGGAACTCAAGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAAEEKMT*ELKEML
Trigger: CAGCATCTCCTTGAGTTCTCACGTCATCTTCTCTTC...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGAGCAGGGGAGAGGGTaGAGCGGATGTTGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGEQGRG*SGCWVL
Trigger: GAGCACCCAACATCCGCTTCACCCTCTCCCCTGCTC...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTGGACAGCCAGCAGGATaGCTCCTGGGGTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPGQPAG*LLGLGL
Trigger: CAGGCCCAACCCCAGGAGTCATCCTGCTGGCTGTCC...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGTTTCAGGCCGATGGTTaGGGGAGGACTTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRFQADG*GRTSQE
Trigger: CTCCTGAGAAGTCCTCCCTCAACCATCGGCCTGAAA...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCCTCAAAGCACACCTaGGTGGCGGGCGACGACGGA +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPSSKHT*VAGDDG
Trigger: TCCGTCGTCGCCCGCCACTCAGGTGTGCTTTGAGGA...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432561.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGTGTGCGACCAACAACTaGCCGTTCAGGTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRCATNN*PFRSRS
Trigger: GGACCTTGACCTGAACGGGCAGTTGTTGGTCGCACA...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTAAACTCACGCAGTCGTaGAGCAGGTCCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRAKLTQS*SRSWQM
Trigger: CATCTGCCAGGACCTGCTGCACGACTGCGTGAGTTT...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCGACGGACGTGGAGGGTaGATCCCCCAGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVDGRGG*IPQGLW
Trigger: CCACAGGCCCTGGGGGATGCACCCTCCACGTCCGTC...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCACGTAATCCTGGACTaGTGTCGTCAGGCTGACGGA +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGHVILD*CRQADG
Trigger: TCCGTCAGCCTGACGACAGCAGTCCAGGATTACGTG...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCGCGACACGCGGGTCCTaGTCGCGCTCCGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SRNVLPILIGQLTEAAQAATRGS*SRSALR
Trigger: CCGGAGAGCGGAGCGCGAGCAGGACCCGCGTGTCGC...GGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR GCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGAGCAGCCGGTCCGGGTaGAGCCCCAGTACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPASSRSG*SPSTGG
Trigger: GCCACCTGTACTGGGGCTGCACCCGGACCGGCTGCT...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTGCCACCACGAGCCCTaGCCAGCGCTCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPACHHEP*PALTRR
Trigger: CCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCA...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCAGCTGCAGCCCTaGCCTGGGTTTGTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSGQLQP*PGFVPR
Trigger: CCTTGGGACAAACCCAGGGCAGGGCTGCAGCTGCCC...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTGTGAAGGCCGTGTGGTaGTGGGAGCAGCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPVKAVW*WEQPLD
Trigger: GTCCAGGGGCTGCTCCCAGCACCACACGGCCTTCAC...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCAGGGAGCCGGCTaGAGCTGCCTCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASLQGAG*SCLRAS
Trigger: GCTGGCCCTGAGGCAGCTGCAGCCGGCTCCCTGAAG...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGCTTCTCTACACGGCTaGAGCCGCCCTCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGASLHG*SRPQKA
Trigger: CGCCTTCTGAGGGCGGCTGCAGCCGTGTAGAGAAGC...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCAGGCTGTGCTCTGCATaGGGCCCTCCGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTRLCSA*GPPSSG
Trigger: CCCTGAGGACGGAGGGCCGCATGCAGAGCACAGCCT...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGTCGTGCAGCAGGTCCTaGCAGATGATGCATGTCAGC +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRSCSRS*QMMHVS
Trigger: GCTGACATGCATCATCTGCCAGGACCTGCTGCACGA...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GTAATCAGACAGCAGAAACACTCCCCGCTGGAGAGCCACGAGGCTCTCGGTCAATCGGGTGCTGGGCAGTaGGGAGGCTGCGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: VIRQQKHSPLESHEALGQSGAGQ*GGCAAC
Trigger: GCAGGCGGCGCAGCCTCCCCACTGCCCAGCACCCGA...TTGACCGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCTGCTGTCTGATTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR CCA 90 bp CTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCACAGCAGTAACAGGCCTGTGGGGCTCCTaGCTCGCCCTCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPILIGQLTEAAQATAVTGLWGS*LALGCW
Trigger: CCAGCACCCGAGGGCGAGCCAGGAGCCCCACAGGCC...TGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR CCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCCTGCCTCCCTCGCATaGGGAAGTGAGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPPASLA*GSEAAP
Trigger: TGGGGCTGCCTCACTTCCCCATGCGAGGGAGGCAGG...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCCTCCAGAAAGCCTGTaGACGACCCACGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGPPESL*TTHAAT
Trigger: GGTGGCTGCGTGGGTCGTCCACAGGCTTTCTGGAGG...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCGCTGGGAGCAGCCCCTaGACCCCGGCTCTCACACCT +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPAGSSP*TPALTP
Trigger: AGGTGTGAGAGCCGGGGTCCAGGGGCTGCTCCCAGC...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCGGGGTGAAGGCCGTGTaGTGCTGGGAGCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVGVKAV*CWEQPL
Trigger: CAGGGGCTGCTCCCAGCACCACACGGCCTTCACCCC...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAGCTGCCTCTCTGCCTTaGCCACACCCCTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKAASLP*PHPWGE
Trigger: TTCACCCCAGGGGTGTGGCCAAGGCAGAGAGGCAGC...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCTTCCACGAGGTTGTTaGGGATGTGGTTTTTACAGA +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAALPRGC*GCGFYR
Trigger: TCTGTAAAAACCACATCCTCAACAACCTCGTGGAAG...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTCCAGCAGGTCCTCTaGACTCCCTTCTTCATCAGA +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGLQQVL*TPFFIR
Trigger: TCTGATGAAGAAGGGAGTTCAGAGGACCTGCTGGAG...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTTGGCTGGCTAATGTCTaGGGACTCACTGTCAACGTC +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRAWLANV*GLTVNV
Trigger: GACGTTGACAGTGAGTCCTCAGACATTAGCCAGCCA...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GAAGCTGCGCAGGCCACAGCAGTAACACAGAACGGTGTCTCCCGTGACTCTGTACAGACCGCACACTGCTaGGGGGCGACACGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: EAAQATAVTQNGVSRDSVQTAHC*GATRGS
Trigger: GGACCCGCGTGTCGCCCCTCAGCAGTGTGCGGTCTG...TACAGAGTCACGGGAGACACCGTTCTGTGTTACTGCTGTGGCCTGCGCAGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000544093.5
CDS-3UTR TCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCCTTCGTCTCTGCTGCTaGTGCCACCACGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLLRLCC*CHHEPC
Trigger: GCAGGGCTCGTGGTGGCATCAGCAGCAGAGACGAAG...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR TCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCCTTCGTCTCTGCTGCTaGTGCCACCACGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTLRLCC*CHHEPC
Trigger: GCAGGGCTCGTGGTGGCATCAGCAGCAGAGACGAAG...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR TCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCGCATGGGGAAGTaGGGCAGCCCCAGACACGAG +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFPRMGK*GSPRHE
Trigger: CTCGTGTCTGGGGCTGCCTCACTTCCCCATGCGAGG...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCTTCCTCAGGAGGACGTaGGGCTCGCCCTCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAFLRRT*GSPSSA
Trigger: CGCGGAGGAGGGCGAGCCGCACGTCCTCCTGAGGAA...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGTGGCTTCCCAGCCGCTaGTCTGACGTCCTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRWLPSR*SDVLVD
Trigger: GTCCACGAGGACGTCAGAGCAGCGGCTGGGAAGCCA...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCTGGCTTCCCAGCCGCTaGTCTGACGTCCTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLWLPSR*SDVLVD
Trigger: GTCCACGAGGACGTCAGAGCAGCGGCTGGGAAGCCA...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCTGTCAAACCTCTGGTTaGCAGGTAATTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPCQTSG*QVILQD
Trigger: ATCCTGAAGAATTACCTGGCAACCAGAGGTTTGACA...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTTGCCACCACGAGCCCTaGCCAGCGCTCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRCHHEP*PALTRR
Trigger: CCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCA...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGTCTCAGCCCCACCCTTaGACAAACTCAGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGSQPHP*TNSGSL
Trigger: CAGAGACCCTGAGTTTGTGCAAGGGTGGGGCTGAGA...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGGGGCAGCTGCAGCCCTaGCCTGGGTTTGTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPAGQLQP*PGFVPR
Trigger: CCTTGGGACAAACCCAGGGCAGGGCTGCAGCTGCCC...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCCGCAGATGAGGAGTaGGTGGGGAGACGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRAADEE*VGRRSV
Trigger: CACAGACCGTCTCCCCACGCACTCCTCATCTGCGGC...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGCCTTCCAAACTCAGCTaGCTCTCTGCCTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGPSKLS*LSALAT
Trigger: TGTGGCCAAGGCAGAGAGGCAGCTGAGTTTGGAAGG...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAGCGCAGGAGCTAGCGTaGATGCCAAAACGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKAQELA*MPKRSP
Trigger: TGGGCTCCGTTTTGGCATGCACGCTAGCTCCTGCGC...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGAGGGGCGCCTGTTTGTaGCGCGGGAAAGATTTCAAG +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGRGACL*RGKDFK
Trigger: CTTGAAATCTTTCCCGCGGCACAAACAGGCGCCCCT...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCGGAACGCTCTCGCCCTaGAGGAGAAGGCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLGTLSP*RRRLRG
Trigger: TCCACGGAGCCTTCTCCTGCAGGGCGAGAGCGTTCC...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432561.6
ENST00000450056.7
CDS-3UTR CCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGTCCTCGTGGACGGTTTaGGCATTTCTACGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGSSWTV*AFLRGC
Trigger: ACAACCGCGTAGAAATGCCCAAACCGTCCACGAGGA...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCCGGTCGGGCATGGGCTaGAAGCAGCAGGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVRSGMG*KQQVHR
Trigger: CCTGTGCACCTGCTGCTTCCAGCCCATGCCCGACCG...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGCTCTCCGGTCGGGCATaGGCTGGAAGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPALSGRA*AGSSRC
Trigger: GCACCTGCTGCTTCCAGCCCATGCCCGACCGGAGAG...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCAAAACGGAGCCCACGTaGAGGCAGAGGGCGGGCACG +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASKTEPT*RQRAGT
Trigger: CGTGCCCGCCCTCTGCCTCCACGTGGGCTCCGTTTT...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCCCTGCCCTCCTCTCCTaGCTGGAGGCCCTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAPALLS*LEALAP
Trigger: GGGAGCAAGGGCCTCCAGCCAGGAGAGGAGGGCAGG...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCTCCCAGCCGCTGCTCTaGCGTCCTCGTGGACGGTTT +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVSQPLL*RPRGRF
Trigger: AAACCGTCCACGAGGACGTCAGAGCAGCGGCTGGGA...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCGCAGGTCCTGGCAGATaGTGCATGTCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPAGPGR*CMSASP
Trigger: AGGAGACGCTGACATGCATCATCTGCCAGGACCTGC...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCCTGCTGTCGTCAGGCTaGCGGACGTGGAGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVLLSSG*RTWRVH
Trigger: ATGCACCCTCCACGTCCGTCAGCCTGACGACAGCAG...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTGCTGTCGTCAGGCTaGCGGACGTGGAGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASLLSSG*RTWRVH
Trigger: ATGCACCCTCCACGTCCGTCAGCCTGACGACAGCAG...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAAGGGCCCGGGCAGCATaGGGGAGCGGCGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLRARAA*GSGASW
Trigger: CCAGGACGCGCCGCTCCCTCATGCTGCCCGGGCCCT...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCAGGGCCCGGGCAGCATaGGGGAGCGGCGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIRARAA*GSGASW
Trigger: CCAGGACGCGCCGCTCCCTCATGCTGCCCGGGCCCT...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGGTTCACCTAGAACCTaGGGCCCCCTTCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTGSPRT*GPLPWL
Trigger: AAGCCAGGGAAGGGGGCCTCAGGTTCTAGGTGAACC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCCCCACTACTTATTTCTCATaGTTATATGCTGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: DATTSPAQRSPGGRAAAPTTYFS*LYAGCL
Trigger: CAGGCAGCCAGCATATAATCATGAGAAATAAGTAGT...GGGGGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGGTGATTAAGATAAAATaGGGCCACTGGTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGVIKIK*GHWCGP
Trigger: GGGCCCACACCAGTGGCCTCATTTTATCTTAATCAC...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGTATGTGGCCTTCTGTaGCGCCTTTTCACTTGCATG +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRVCGLL*RLFTCM
Trigger: CATGCAAGTGAAAAGGCGTCACAGAAGGCCACATAC...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGATACAGGCTTGAGGTaGTGGATACCCCAGTTACTG +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRADTGLR*WIPQLL
Trigger: CAGTAACTGGGGTATCCATCACCTCAAGCCTGTATC...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTCAGAGACCAGTTTATTaGTGGGGAAGGAAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRAQRPVY*WGRKGR
Trigger: GCGACCTTTCCTTCCCCAGCAATAAACTGGTCTCTG...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCGCCGCGCAGAACGTGTaGATGCAGGGCTGCAAACTC +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLAAQNV*MQGCKL
Trigger: GAGTTTGCAGCCCTGCATGCACACGTTCTGCGCGGC...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGCCGCGCAGAACGTGTaGATGCAGGGCTGCAAACTC +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTAAQNV*MQGCKL
Trigger: GAGTTTGCAGCCCTGCATGCACACGTTCTGCGCGGC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGCGACTCTTGTCTGGATaGTGGATGAGGTATGCTTCC +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRRLLSG*WMRYAS
Trigger: GGAAGCATACCTCATCCAGCATCCAGACAAGAGTCG...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTGCTGGAAGCAGCAGGTaGACAGGGCGTGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPAGSSR*TGRGFL
Trigger: AAGGAAGCCACGCCCTGTGCACCTGCTGCTTCCAGC...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGCTGGAAGCAGCAGGTaGACAGGGCGTGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTAGSSR*TGRGFL
Trigger: AAGGAAGCCACGCCCTGTGCACCTGCTGCTTCCAGC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAAGGTGGCAGAAAGGCTaGAGGCAGACCGCACACTGC +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSRWQKG*RQTAHC
Trigger: GCAGTGTGCGGTCTGCCTGCAGCCTTTCTGCCACCT...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCAGCAGCCGGTCCGGGTaGAGCCCCAGTACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFSSRSG*SPSTGG
Trigger: GCCACCTGTACTGGGGCTGCACCCGGACCGGCTGCT...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TCAGACAGCAGAAACACTCCCCGCTGGAGAGCCACGAGGCTCTCGGTCAACATGACCTGTCGGAGACCCTaGGTCCCTTCCCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SDSRNTPRWRATRLSVNMTCRRP*VPSLRG
Trigger: CCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGT...CATGTTGACCGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCTGCTGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp ATCAGACAGCAGAAACACTCCCCGCTGGAGAGCCACGAGGCTCTCGGTCAACATTGCCACCACGAGCCCTaGCCAGCGCTCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IRQQKHSPLESHEALGQHCHHEP*PALTRR
Trigger: CCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCA...ATGTTGACCGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCTGCTGTCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000544093.5
CDS-3UTR GCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCACAAAAGAGCAAAACTaGCCCTCTCGGCGGGACGGC +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPTKEQN*PSRRDG
Trigger: GCCGTCCCGCCGAGAGGGGCAGTTTTGCTCTTTTGT...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCAGGCGGAAGCCAAGGTaGCCCTCAGGCTCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVRRKPR*PSGSVG
Trigger: CCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGCCT...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCAGGCGGAAGCCAAGGTaGCCCTCAGGCTCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFRRKPR*PSGSVG
Trigger: CCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGCCT...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCACTCTGCATGGGGCCTaGCTCCCTCGCATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASTLHGA*LPRMGK
Trigger: CTTCCCCATGCGAGGGAGGCAGGCCCCATGCAGAGT...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGCGCTGGGAGGATAACTaGCCTGCTCCCAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPARWEDN*PAPKAS
Trigger: GGAGGCCTTGGGAGCAGGGCAGTTATCCTCCCAGCG...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCCGCTGGGAGGATAACTaGCCTGCTCCCAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPRWEDN*PAPKAS
Trigger: GGAGGCCTTGGGAGCAGGGCAGTTATCCTCCCAGCG...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCCACCCGAGGAGTAACTaGCCTGATCTCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTHPRSN*PDLPAS
Trigger: GGAGGCAGGGAGATCAGGGCAGTTACTCCTCGGGTG...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGAGTTCACGGCCACCTaGTTCCATAAAACACAGCTC +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRAEFTAT*FHKTQL
Trigger: GAGCTGTGTTTTATGGAAGCAGGTGGCCGTGAACTC...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACAGCCGGTCAGTTTTaGTGGGTGGGATGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKTAGQF*WVGWLG
Trigger: ACCCAGCCATCCCACCCAGCAAAACTGACCGGCTGT...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCGTCAGCGCGCGGATCTaGAGGGCTAGGCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPVSARI*RARLCS
Trigger: AGAGCACAGCCTAGCCCTGCAGATCCGCGCGCTGAC...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCAGGGGTCATACATaGTGGGCCTTCAAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGGRGHT*WAFKGH
Trigger: ATGGCCCTTGAAGGCCCAGCATGTATGACCCCTGCC...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGTCAGTGATCAGTAGATaGTGCCCTGGGGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRSVISR*CPGAKH
Trigger: ATGTTTGGCCCCAGGGCAGCATCTACTGATCACTGA...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGTCTCACAAATGCATaGTCCCAGCACAGCGCACGG +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGGLTNA*SQHSAR
Trigger: CCGTGCGCTGTGCTGGGAGCATGCATTTGTGAGACC...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCCTCAGCCTCCCAAAGTaGTGGGAGTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPLSLPK*WEYRRE
Trigger: CTCACGCCTGTACTCCCAGCACTTTGGGAGGCTGAG...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCTCAGCCTCCCAAAGTaGTGGGAGTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGLSLPK*WEYRRE
Trigger: CTCACGCCTGTACTCCCAGCACTTTGGGAGGCTGAG...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAGAAGCGGATGTTGGGTaGTCAGCCATGCCCCACACT +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKEADVG*SAMPHT
Trigger: AGTGTGGGGCATGGCTGAGCACCCAACATCCGCTTC...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCAGGAAAGCACTGTCTaGCCGACACTGAGGATAAAC +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGQESTV*PTLRIN
Trigger: GTTTATCCTCAGTGTCGGGCAGACAGTGCTTTCCTG...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544093.5
CDS-3UTR CCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCTCGTCTCCGCCCGATaGTCCACTCCCGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFLVSAR*STPASS
Trigger: TGAGGAAGCGGGAGTGGACCATCGGGCGGAGACGAG...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCCTCCTCCATCTTGTCTaGCTTCCCAGCCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPLLHLV*LPSRCS
Trigger: AGAGCAGCGGCTGGGAAGCCAGACAAGATGGAGGAG...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAACTCCTCCATCTTGTCTaGCTTCCCAGCCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKLLHLV*LPSRCS
Trigger: AGAGCAGCGGCTGGGAAGCCAGACAAGATGGAGGAG...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGCTCTTGTCTGGATGCTaGATGAGGTATGCTTCCACG +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRLLSGC*MRYAST
Trigger: CGTGGAAGCATACCTCATCCAGCATCCAGACAAGAG...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTCTTGTCTGGATGCTaGATGAGGTATGCTTCCACG +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGLLSGC*MRYAST
Trigger: CGTGGAAGCATACCTCATCCAGCATCCAGACAAGAG...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGTCGGGTGCTGGGCAGTaGGGAGGCTGCGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRSGAGQ*GGCAAC
Trigger: GCAGGCGGCGCAGCCTCCCCACTGCCCAGCACCCGA...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCTCCATGTCAAACCTCTaGTTGCCAGGTAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAASMSNL*LPGNSS
Trigger: TGAAGAATTACCTGGCAACCAGAGGTTTGACATGGA...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAAGAAACACTCCCCGCTaGAGAGCCACGAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSRNTPR*RATRLS
Trigger: CGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCT...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR CCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAGGCTCCTTACCACGCTaGGAGGATAACTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKGSLPR*EDNCPA
Trigger: AGCAGGGCAGTTATCCTCCCAGCGTGGTAAGGAGCC...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCCAGAGAGGCCTCACTaGGGTGGACGGGTTCACCTA +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPPERPH*GGRVHL
Trigger: TAGGTGAACCCGTCCACCCCAGTGAGGCCTCTCTGG...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCGCTCCGTCCTGCTGCTaGTCAGCGCGCGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAAPSCC*SARGSA
Trigger: TGCAGATCCGCGCGCTGACCAGCAGCAGGACGGAGC...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAAGCACTAGGCGTTTCTaGAGGTGGCTCCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKSTRRF*RWLPRR
Trigger: TCTTCGGGGGAGCCACCTCCAGAAACGCCTAGTGCT...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGAGCACTAGGCGTTTCTaGAGGTGGCTCCCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGSTRRF*RWLPRR
Trigger: TCTTCGGGGGAGCCACCTCCAGAAACGCCTAGTGCT...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCGCTGGTTCCTTCTGGTaGCCCTGCAGGGAGATCTGT +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPAGSFW*PCREIC
Trigger: ACAGATCTCCCTGCAGGGCCACCAGAAGGAACCAGC...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGAATCCCAGCACTGTaGGAGGTAGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSGIPAL*EVEAGR
Trigger: TCTGCCCGCCTCTACCTCCCACAGTGCTGGGATTCC...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCGGAGTTGCTGGGCGTaGCGGCTTACGCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFRSCWA*RLTPGI
Trigger: GATTCCAGGCGTAAGCCGCCACGCCCAGCAACTCCG...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGAAGAGGCCGAGGCTGTaGGGAAGAGGTCTGACGTCG +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRKRPRL*GRGLTS
Trigger: CGACGTCAGACCTCTTCCCCACAGCCTCGGCCTCTT...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432561.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCCAGGAGAAGGCTCCGTaGAAGAGGCCGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPQEKAP*KRPRLW
Trigger: CCACAGCCTCGGCCTCTTCCACGGAGCCTTCTCCTG...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432561.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCCCCCAGACCCACAACTaGAGGAACGCTCTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVPQTHN*RNALAL
Trigger: CAGGGCGAGAGCGTTCCTCCAGTTGTGGGTCTGGGG...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000432561.6
ENST00000450056.7
CDS-3UTR TCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGTCTGTCTGGGAGAGCTaGGGCAAAGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGSVWES*GKAGDF
Trigger: GAAGTCTCCAGCTTTGCCTCAGCTCTCCCAGACAGA...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTGGCTCCAAATCCTCCTaGTCCTGGGGTTCCAACGAC +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPGSKSS*SWGSND
Trigger: GTCGTTGGAACCCCAGGATCAGGAGGATTTGGAGCC...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGCTTCACCTCCAGTGCTaGAAGCTGCTCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRLHLQC*KLLRAS
Trigger: AGAGGCCCTGAGCAGCTTTCAGCACTGGAGGTGAAG...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR TCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCGGTTCACCTAGAACCTaGGGCCCCCTTCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPGSPRT*GPLPWL
Trigger: AAGCCAGGGAAGGGGGCCTCAGGTTCTAGGTGAACC...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGGAAAGTAGTGCGTCCTaGGCACTCATCACCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGESSAS*ALITFV
Trigger: AACAAAGGTGATGAGTGCTCAGGACGCACTACTTTC...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAAAGCAGAGGAACACCTaGGGGGCTCCAGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSKQRNT*GAPGEA
Trigger: TGCTTCTCCTGGAGCCCCTCAGGTGTTCCTCTGCTT...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGACAACCGTGAAAAGTaGGCGACAGAGGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRDNREK*ATEEGA
Trigger: CGCCCCTTCCTCTGTCGCTCACTTTTCACGGTTGTC...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCCAACCACAGCACCTCTaGGACAGACTGGACCCTTCC +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTQPQHL*DRLDPS
Trigger: GGAAGGGTCCAGTCTGTCTCAGAGGTGCTGTGGTTG...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTAGAGCTACAGGGTaGAGGAACGTGCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFPRATG*RNVLGS
Trigger: GCTCCCCAGCACGTTCCTTCACCCTGTAGCTCTAGG...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCGCCACAAGAAGCCCCTaGAGAGAAGCCTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPATRSP*REAWGT
Trigger: AGTGCCCCAGGCTTCTCTTCAGGGGCTTCTTGTGGC...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCAGGTGGAGGCTGCAGTaGGCTGACATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFRWRLQ*ADIAPL
Trigger: CAGTGGCGCAATGTCAGCTCACTGCAGCCTCCACCT...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGCGCAGAACGTGTGCATaGAGGGCTGCAAACTCACGC +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRRRTCA*RAANSR
Trigger: GCGTGAGTTTGCAGCCCTGCATGCACACGTTCTGCG...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCGCCGCGCAGAACGTGTaGATGCAGGGCTGCAAACTC +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASAAQNV*MQGCKL
Trigger: GAGTTTGCAGCCCTGCATGCACACGTTCTGCGCGGC...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTATGCTGGATGAGGTATaGTTCCACGAGGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRAMLDEV*FHEVVE
Trigger: CTCAACAACCTCGTGGAAGCATACCTCATCCAGCAT...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAACACGTAATCCTGGACTaGTGTCGTCAGGCTGACGGA +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKHVILD*CRQADG
Trigger: TCCGTCAGCCTGACGACAGCAGTCCAGGATTACGTG...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAACAAAAGAGCAAAACTaGCCCTCTCGGCGGGACGGC +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSTKEQN*PSRRDG
Trigger: GCCGTCCCGCCGAGAGGGGCAGTTTTGCTCTTTTGT...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGCCTCTCCCTCACCCCTaGACCAACTCAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRPLPHP*TNSRLP
Trigger: GGGAAGTCTTGAGTTGGTGCAGGGGTGAGGGAGAGG...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCAGAGGCTCTCTGAGCTaGCTGCCCTTCCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFRGSLS*LPFLDR
Trigger: CCTGTCCAGGAAGGGCAGGCAGCTCAGAGAGCCTCT...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCACCCGAGGAGTAACTaGCCTGATCTCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFHPRSN*PDLPAS
Trigger: GGAGGCAGGGAGATCAGGGCAGTTACTCCTCGGGTG...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCTTCCCTTCCCAGTaGAGGGCTCCCGGCAACCTA +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPASFPSQ*RAPGNL
Trigger: TAGGTTGCCGGGAGCCCTGCACTGGGAAGGGAAGGA...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCTGCAGGGCTAGGCTGTaGTCTGCATGCGGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFCRARL*SACGPP
Trigger: CGGAGGGCCGCATGCAGAGCACAGCCTAGCCCTGCA...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCGGCCCTTGCTCCCTCTaGAAAGCACATCCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASGPCSL*KAHPSH
Trigger: GTGGGAGGGATGTGCTTTGCAGAGGGAGCAAGGGCC...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCTGCTTCGACAGCCTaGCCTCCTCTCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPASASTA*PPLLAG
Trigger: TCCAGCCAGGAGAGGAGGGCAGGCTGTCGAAGCAGA...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGATCTGTTTTCTTTTCTaGTTCGACAGCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRICFLF*FDSLPS
Trigger: GGAGGGCAGGCTGTCGAAGCAGAAAAGAAAACAGAT...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCCTGACATTGCGCCACTaGCCTCCAGCCCTGACAACA +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLLTLRH*PPALTT
Trigger: TGTTGTCAGGGCTGGAGGGCAGTGGCGCAATGTCAG...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGACAAAGCCTCCACACTaGATGAACAGGTTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGTKPPH*MNRLWL
Trigger: AAGCCACAACCTGTTCATCCAGTGTGGAGGCTTTGT...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTACAAAGCCTCCACACTaGATGAACAGGTTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRATKPPH*MNRLWL
Trigger: AAGCCACAACCTGTTCATCCAGTGTGGAGGCTTTGT...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGCCGGTCAGTTTTGCTaGGTGGGATGGCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSAGQFC*VGWLGL
Trigger: AAGACCCAGCCATCCCACCCAGCAAAACTGACCGGC...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGCCAGGAAGAAGCAGTaGGATCTGCAGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSARKKQ*DLQQHQ
Trigger: CTGGTGCTGCTGCAGATCCCACTGCTTCTTCCTGGC...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCGAGGCCTCACTGGGGTaGACGGGTTCACCTAGAACC +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFEASLG*TGSPRT
Trigger: GGTTCTAGGTGAACCCGTCCACCCCAGTGAGGCCTC...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAATATATGCTGGCTGCCTaGTGCAGCACTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKYMLAA*CSTVLV
Trigger: CACCAGCACAGTGCTGCACCAGGCAGCCAGCATATA...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTATTCAAGGCCAGCACTaGGCAGGGCGGGTCTCACAA +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPIQGQH*AGRVSQ
Trigger: TTGTGAGACCCGCCCTGCCCAGTGCTGGCCTTGAAT...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGCTGGTTCCTTCTGGTaGCCCTGCAGGGAGATCTGT +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTAGSFW*PCREIC
Trigger: ACAGATCTCCCTGCAGGGCCACCAGAAGGAACCAGC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAGCCGGGCGTACGTGGTaGGCCTGGGGTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLAGRTW*AWGPHW
Trigger: CCAGTGGGGACCCCAGGCCCACCACGTACGCCCGGC...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TCAGCTCACGGAAGCTGCGCAGGCCACAGCAGTAACACAGAACGGTGTCTCCCGGCAGGTCCTGGCAGATaGTGCATGTCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SAHGSCAGHSSNTERCLPAGPGR*CMSASP
Trigger: AGGAGACGCTGACATGCATCATCTGCCAGGACCTGC...CGGGAGACACCGTTCTGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR TCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAATGTCTGGATGCTGGATaGGGTATGCTTCCACGAGGT +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKCLDAG*GMLPRG
Trigger: ACCTCGTGGAAGCATACCTCATCCAGCATCCAGACA...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGGCTGCAGCATGTCTTaGGTGATTTTATTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRAGCSMS*VILFLA
Trigger: TGCCAGAAATAAAATCACTCAAGACATGCTGCAGCC...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCAGAAAAAGACCGCCTaGCTTTGGGCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGQKKTA*LWAAAC
Trigger: ACATGCTGCAGCCCAAAGTCAGGCGGTCTTTTTCTG...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTCACTGTCAACGTCTaGCAGCTCCAGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASLTVNV*QLQQVL
Trigger: GAGGACCTGCTGGAGCTGTCAGACGTTGACAGTGAG...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
CDS-3UTR TCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCGAACGGTGTCTCCCGTaGCTCTGTAATCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPERCLP*LCNQTA
Trigger: TGCTGTCTGATTACAGAGTCACGGGAGACACCGTTC...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR TCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGCTTCACCTCCAGTGCTaGAAGCTGCTCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPALHLQC*KLLRAS
Trigger: AGAGGCCCTGAGCAGCTTTCAGCACTGGAGGTGAAG...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR TCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGAGCCTCCACACTGGATaGACAGGTTGTGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRSLHTG*TGCGFP
Trigger: TGGGAAGCCACAACCTGTTCATCCAGTGTGGAGGCT...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCAGGTGCAGCTGGTCCTaGGGAAAGACCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFRCSWS*GKTSIL
Trigger: GAGGATGCTGGTCTTTCCTCAGGACCAGCTGCACCT...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCAGGTGCAGCTGGTCCTaGGGAAAGACCAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPRCSWS*GKTSIL
Trigger: GAGGATGCTGGTCTTTCCTCAGGACCAGCTGCACCT...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTGGGATGGCTGGGTCTTaGGGACGAGGAAGTACAGAA +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPGMAGS*GRGSTE
Trigger: TTCTGTACTTCCTCGTCCTCAAGACCCAGCCATCCC...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCCCAGGACCTCAGAGGTaGCTGTATCTGCAGACATGG +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLPGPQR*LYLQTW
Trigger: CCATGTCTGCAGATACAGTCACCTCTGAGGTCCTGG...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTGCGGCCAACAAGCATAGAAGGTaGCAGAAAGAGTCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: ADATTSPAQRSPGGRAAANKHRR*QKESRK
Trigger: TTTTCTTGACTCTTTCTGTCACCTTCTATGCTTGTT...GGCCGCAGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGCCCTGCACCTGCACCTaGGGTATCTTTGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPAPCTCT*GIFGPM
Trigger: CATGGGACCAAAGATACCTCAGGTGCAGGTGCAGGG...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432561.6
CDS-3UTR GCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCTGCGGCGGCGGCGACTaGTTGCCTTCCTCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFCGGGD*LPSSGR
Trigger: GCGGCCCGAGGAAGGCAAGCAGTCGCCGCCGCCGCA...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCGGAGACTTCATCACTTaGCACAGAGGGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPGDFIT*HRGTTS
Trigger: GGAAGTGGTCCCTCTGTGGCAAGTGATGAAGTCTCC...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCTGTGCGACCAACAACTaGCCGTTCAGGTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLCATNN*PFRSRS
Trigger: GGACCTTGACCTGAACGGGCAGTTGTTGGTCGCACA...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GTCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGCTCAGGGCCTCTGGATaGTTAGTTTTTGAACCTTGT +
Preference number: 4 (lower is better)
Translates to: VSAADATTSPAQRSPGGRLRASG*LVFEPC
Trigger: ACAAGGTTCAAAAACTAAGCATCCAGAGGCCCTGAG...CCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTTCCAGTGCTGAAAGCTaGTCAGGGCCTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPSSAES*SGPLDA
Trigger: AGCATCCAGAGGCCCTGAGCAGCTTTCAGCACTGGA...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGTCCAGTGCTGAAAGCTaGTCAGGGCCTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRSSAES*SGPLDA
Trigger: AGCATCCAGAGGCCCTGAGCAGCTTTCAGCACTGGA...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp GCGGAAGCCAAGGTGCCCCTCAGGCTCTGTAGGGTCTTGGAGGAAGGGCCCGGGCAAACTCAGGGTCTCTaGATTGTGGCTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: AEAKVPLRLCRVLEEGPGQTQGL*IVASSG
Trigger: ACCAGAAGAAGCCACAATGCAGAGACCCTGAGTTTG...CCCGGGCCCTTCCTCCAAGACCCTACAGAGCCTGAGGGGCACCTTGGCTTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCCCTCTCCCTCACCCCTaGACCAACTCAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVPLPHP*TNSRLP
Trigger: GGGAAGTCTTGAGTTGGTGCAGGGGTGAGGGAGAGG...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCGTCAGCGCGCGGATCTaGAGGGCTAGGCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFVSARI*RARLCS
Trigger: AGAGCACAGCCTAGCCCTGCAGATCCGCGCGCTGAC...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCAGGTAACAGGCAGGTaGGGTAAACTAACTAGAAAG +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGQVTGR*GKLTRK
Trigger: CTTTCTAGTTAGTTTACCGCACCTGCCTGTTACCTG...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAAGGGGCGCCTGTTTGTaGCGCGGGAAAGATTTCAAG +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSRGACL*RGKDFK
Trigger: CTTGAAATCTTTCCCGCGGCACAAACAGGCGCCCCT...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGAGAGGGGCTACCATCTaGATGGGGCCGTCATTCATA +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGRGATI*MGPSFI
Trigger: TATGAATGACGGCCCCATGCAGATGGTAGCCCCTCT...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCGGAACGCTCTCGCCCTaGAGGAGAAGGCTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFGTLSP*RRRLRG
Trigger: TCCACGGAGCCTTCTCCTGCAGGGCGAGAGCGTTCC...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450056.7
CDS-3UTR CCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCCTCCTCCATCTTGTCTaGCTTCCCAGCCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPLLHLV*LPSRCS
Trigger: AGAGCAGCGGCTGGGAAGCCAGACAAGATGGAGGAG...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CTCGTAGCTGTTGTTGTTCAGCACGCCGTCCAGACACTTGTCACCCAGGTTGAGCTCTCCGGTCGGGCATaGGCTGGAAGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LVAVVVQHAVQTLVTQVELSGRA*AGSSRC
Trigger: GCACCTGCTGCTTCCAGCCCATGCCCGACCGGAGAG...CTCAACCTGGGTGACAAGTGTCTGGACGGCGTGCTGAACAACAACAGCTACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR CCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCGGATGTTACGGCCACTaGCAACTCGGAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPGCYGH*QLGSRN
Trigger: ATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACATCC...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR CCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAAGGAGCGACTAACTTaGCGGCCACGTCGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLKERLT*RPRRGL
Trigger: TAACCCTCGACGTGGCCGCCAAGTTAGTCGCTCCTT...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTGCTGGGTGGGATGGCTaGGTCTTGAGGACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRAGWDG*VLRTRK
Trigger: CTTCCTCGTCCTCAAGACCCAGCCATCCCACCCAGC...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCGCCAGGAAGAAGCAGTaGGATCTGCAGCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVARKKQ*DLQQHQ
Trigger: CTGGTGCTGCTGCAGATCCCACTGCTTCTTCCTGGC...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGTGGGGAGACGGTCTGTaGGGCCAGCGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRWGDGL*GQRAAA
Trigger: TGCAGCTGCCCGCTGGCCCCACAGACCGTCTCCCCA...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGCCCCCTTCCCTGGCTTaGAGCCTGGGCAGCACACGG +
Preference number: 4 (lower is better)
Translates to: PSGQQLELSVCHRDLELQPPSLA*SLGSTR
Trigger: CCGTGTGCTGCCCAGGCTCCAAGCCAGGGAAGGGGG...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCCCAGAGAGGCCTCACTaGGGTGGACGGGTTCACCTA +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAPERPH*GGRVHL
Trigger: TAGGTGAACCCGTCCACCCCAGTGAGGCCTCTCTGG...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGAAGGCCGTGTGGTGCTaGGAGCAGCCCCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: PSGQQLELSVCHRDLELQKAVWC*EQPLDP
Trigger: GGGGTCCAGGGGCTGCTCCCAGCACCACACGGCCTT...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCATCCAGCGGCCCAAGTaGACCCACATTCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVIQRPK*THIQGQ
Trigger: CTGGCCTTGAATGTGGGTCCACTTGGGCCGCTGGAT...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCCTGGGGTCCCCACTaGAAACAGCTCTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRAWGPH*KQLSLT
Trigger: TGTCAAAGAGAGCTGTTTCCAGTGGGGACCCCAGGC...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTGGCTCCAAATCCTCCTaGTCCTGGGGTTCCAACGAC +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRGSKSS*SWGSND
Trigger: GTCGTTGGAACCCCAGGATCAGGAGGATTTGGAGCC...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTTGTCTGGATGCTGGATaGGGTATGCTTCCACGAGGT +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPCLDAG*GMLPRG
Trigger: ACCTCGTGGAAGCATACCTCATCCAGCATCCAGACA...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCACAGAAAAAGACCGCCTaGCTTTGGGCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSQKKTA*LWAAAC
Trigger: ACATGCTGCAGCCCAAAGTCAGGCGGTCTTTTTCTG...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCCAGAAAAAGACCGCCTaGCTTTGGGCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLQKKTA*LWAAAC
Trigger: ACATGCTGCAGCCCAAAGTCAGGCGGTCTTTTTCTG...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCCTCCAGCAGGTCCTCTaGACTCCCTTCTTCATCAGA +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTLQQVL*TPFFIR
Trigger: TCTGATGAAGAAGGGAGTTCAGAGGACCTGCTGGAG...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
CDS-3UTR TCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCTCACTGTCAACGTCTaGCAGCTCCAGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRLTVNV*QLQQVL
Trigger: GAGGACCTGCTGGAGCTGTCAGACGTTGACAGTGAG...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCTGGCTGGCTAATGTCTaGGGACTCACTGTCAACGTC +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTWLANV*GLTVNV
Trigger: GACGTTGACAGTGAGTCCTCAGACATTAGCCAGCCA...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCAGACCGCACACTGCTaGGGGGCGACACGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFQTAHC*GATRGS
Trigger: GGACCCGCGTGTCGCCCCTCAGCAGTGTGCGGTCTG...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCGAACGGTGTCTCCCGTaGCTCTGTAATCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLERCLP*LCNQTA
Trigger: TGCTGTCTGATTACAGAGTCACGGGAGACACCGTTC...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR TCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCTCCCTCAGGGGGCTGTaGAAACACCTTGACGTGCTT +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASSLRGL*KHLDVL
Trigger: AAGCACGTCAAGGTGTTTTCACAGCCCCCTGAGGGA...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR TCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTCCCTCAGGGGGCTGTaGAAACACCTTGACGTGCTT +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPSLRGL*KHLDVL
Trigger: AAGCACGTCAAGGTGTTTTCACAGCCCCCTGAGGGA...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR TCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCCAGAATGAAGAGACCTaGGCAGGTTTCACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPQNEET*AGFTGV
Trigger: GACTCCTGTGAAACCTGCTCAGGTCTCTTCATTCTG...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTTGCAGTCAGAAGCTATaGCAGAGGCCATCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPCSQKL*QRPSQR
Trigger: TCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCA...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGCTGAGGGGCTGTTTGTaGGAATTAGCTGGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRLRGCL*ELAGSV
Trigger: CACCGAACCAGCTAATTCTCACAAACAGCCCCTCAG...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTGGAGGGGCTGGTACCTaGGGGGCTGTTTGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRGGAGT*GAVCEN
Trigger: ATTCTCACAAACAGCCCCTCAGGTACCAGCCCCTCC...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCAGGAACCGGCCCCGCTaGCACCCTGATCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFRNRPR*HPDLRV
Trigger: AACTCTGAGATCAGGGTGTCAGCGGGGCCGGTTCCT...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAGTGGCGTGCGAGCTTTaGTGGCAGAGTGTTACAATA +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKVACEL*WQSVTI
Trigger: TATTGTAACACTCTGCCATCAAAGCTCGCACGCCAC...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTTTCAGGCCGATGGTTaGGGGAGGACTTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPAFQADG*GRTSQE
Trigger: CTCCTGAGAAGTCCTCCCTCAACCATCGGCCTGAAA...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAACAGAGACCAGTTTATTaGTGGGGAAGGAAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKQRPVY*WGRKGR
Trigger: GCGACCTTTCCTTCCCCAGCAATAAACTGGTCTCTG...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCTGTGCGACCAACAACTaGCCGTTCAGGTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFCATNN*PFRSRS
Trigger: GGACCTTGACCTGAACGGGCAGTTGTTGGTCGCACA...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTGTGCGACCAACAACTaGCCGTTCAGGTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPCATNN*PFRSRS
Trigger: GGACCTTGACCTGAACGGGCAGTTGTTGGTCGCACA...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAATTTCTACGCGGTTGTaGGACCAACAACTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKISTRL*DQQLPV
Trigger: AACGGGCAGTTGTTGGTCGCACAACCGCGTAGAAAT...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCGTAGCTGTTGTTGTTCAGCACGCCGTCCAGACACTTGTCACCCAGGTTGAGTGGCTTCCCAGCCGCTaGTCTGACGTCCTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: LVAVVVQHAVQTLVTQVEWLPSR*SDVLVD
Trigger: GTCCACGAGGACGTCAGAGCAGCGGCTGGGAAGCCA...CTCAACCTGGGTGACAAGTGTCTGGACGGCGTGCTGAACAACAACAGCTACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR GCA 90 bp CTCACGGAAGCTGCGCAGGCCACAGCAGTAACACAGAACGGTGTCTCCCGTGACAAACTCACGCAGTCGTaGAGCAGGTCCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: LTEAAQATAVTQNGVSRDKLTQS*SRSWQM
Trigger: CATCTGCCAGGACCTGCTGCACGACTGCGTGAGTTT...GTCACGGGAGACACCGTTCTGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR GCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGAAACTCACGCAGTCGTaGAGCAGGTCCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPAKLTQS*SRSWQM
Trigger: CATCTGCCAGGACCTGCTGCACGACTGCGTGAGTTT...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GTTGTTCAGCACGCCGTCCAGACACTTGTCACCCAGGTTGAGCTCTGCCGAGATGCCGCGCAGAACGTGTaGATGCAGGGCTGCAAACTC +
Preference number: 4 (lower is better)
Translates to: VVQHAVQTLVTQVELCRDAAQNV*MQGCKL
Trigger: GAGTTTGCAGCCCTGCATGCACACGTTCTGCGCGGC...ATCTCGGCAGAGCTCAACCTGGGTGACAAGTGTCTGGACGGCGTGCTGAACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR GCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAACGACTCTTGTCTGGATaGTGGATGAGGTATGCTTCC +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKRLLSG*WMRYAS
Trigger: GGAAGCATACCTCATCCAGCATCCAGACAAGAGTCG...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCACGTAATCCTGGACTaGTGTCGTCAGGCTGACGGA +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASHVILD*CRQADG
Trigger: TCCGTCAGCCTGACGACAGCAGTCCAGGATTACGTG...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp TCCCGTGACTCTGTAATCAGACAGCAGAAACACTCCCCGCTGGAGAGCCACGAGGCTGGAAGCAGCAGGTaGACAGGGCGTGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SRDSVIRQQKHSPLESHEAGSSR*TGRGFL
Trigger: AAGGAAGCCACGCCCTGTGCACCTGCTGCTTCCAGC...CTCGTGGCTCTCCAGCGGGGAGTGTTTCTGCTGTCTGATTACAGAGTCACGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR GCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCAGCAGCCGGTCCGGGTaGAGCCCCAGTACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRISSRSG*SPSTGG
Trigger: GCCACCTGTACTGGGGCTGCACCCGGACCGGCTGCT...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CACTGGCAACTCGGAAGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGACCTGTCGGAGACCCTaGGTCCCTTCCCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: HWQLGSRNVLPILIGQLTTCRRP*VPSLRG
Trigger: CCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGT...CGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCTTCCGAGTTGCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTACAGCCGGTCAGTTTTaGTGGGTGGGATGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRTAGQF*WVGWLG
Trigger: ACCCAGCCATCCCACCCAGCAAAACTGACCGGCTGT...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGAGGCTGTGCTCTGCATaGGGCCCTCCGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PSGQQLELSVCHRDLELQRLCSA*GPPSSG
Trigger: CCCTGAGGACGGAGGGCCGCATGCAGAGCACAGCCT...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGACAAGGAGGACCAATaGACGCACAGATCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSDKEDQ*THRSGR
Trigger: TCTCCCAGATCTGTGCGTGCATTGGTCCTCCTTGTC...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTAGAGGGGCTACCATCTaGATGGGGCCGTCATTCATA +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPRGATI*MGPSFI
Trigger: TATGAATGACGGCCCCATGCAGATGGTAGCCCCTCT...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCACGGAAGCTGCGCAGGCCACAGCAGTAACACAGAACGGTGTCTCCCGTGACACCCAGGTTGAGCTCTaGCGAGATGAAGGGGCAATG +
Preference number: 4 (lower is better)
Translates to: LTEAAQATAVTQNGVSRDTQVEL*RDEGAM
Trigger: CATTGCCCCTTCATCTCGGCAGAGCTCAACCTGGGT...GTCACGGGAGACACCGTTCTGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR CCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAGAGCTGAGGCAAAGCTaGAGACTTCATCACTTGCCA +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKELRQS*RLHHLP
Trigger: TGGCAAGTGATGAAGTCTCCAGCTTTGCCTCAGCTC...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCTCCTCGTGGACGGTTTaGGCATTTCTACGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLSSWTV*AFLRGC
Trigger: ACAACCGCGTAGAAATGCCCAAACCGTCCACGAGGA...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGCTCTGACGTCCTCGTaGACGGTTTGGGCATTTCTA +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSALTSS*TVWAFL
Trigger: TAGAAATGCCCAAACCGTCCACGAGGACGTCAGAGC...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCGCTCTGACGTCCTCGTaGACGGTTTGGGCATTTCTA +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLALTSS*TVWAFL
Trigger: TAGAAATGCCCAAACCGTCCACGAGGACGTCAGAGC...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTCGTGCAGCAGGTCCTaGCAGATGATGCATGTCAGC +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPSCSRS*QMMHVS
Trigger: GCTGACATGCATCATCTGCCAGGACCTGCTGCACGA...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCCTCTTGTCTGGATGCTaGATGAGGTATGCTTCCACG +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPLLSGC*MRYAST
Trigger: CGTGGAAGCATACCTCATCCAGCATCCAGACAAGAG...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCACTGCGACTCTTGTCTaGATGCTGGATGAGGTATGC +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPTATLV*MLDEVC
Trigger: GCATACCTCATCCAGCATCCAGACAAGAGTCGCAGT...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCACAGAAACACTCCCCGCTaGAGAGCCACGAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: QECSADTDRSAHGSCAGHRNTPR*RATRLS
Trigger: CGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCT...GTGGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
CDS-3UTR CCA 90 bp AGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCAGAAACACTCCCCGCTaGAGAGCCACGAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SRNVLPILIGQLTEAAQARNTPR*RATRLS
Trigger: CGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCT...GGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
CDS-3UTR CCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTGGATGTTACGGCCACTaGCAACTCGGAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPGCYGH*QLGSRN
Trigger: ATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACATCC...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR CCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCAAGGAGCGACTAACTTaGCGGCCACGTCGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPKERLT*RPRRGL
Trigger: TAACCCTCGACGTGGCCGCCAAGTTAGTCGCTCCTT...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGCCTTGGCCACACCCCTaGGGTGAAGGCCGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGPWPHP*GEGRVV
Trigger: CACCACACGGCCTTCACCCCAGGGGTGTGGCCAAGG...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCTATATGCTGGCTGCCTaGTGCAGCACTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVYMLAA*CSTVLV
Trigger: CACCAGCACAGTGCTGCACCAGGCAGCCAGCATATA...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCGGCGGGACGGGGACATaGCTCAGCCCACCACGGAGT +
Preference number: 4 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIGGTGT*LSPPRS
Trigger: ACTCCGTGGTGGGCTGAGCCATGTCCCCGTCCCGCC...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCGCCTGGGGTCCCCACTaGAAACAGCTCTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVAWGPH*KQLSLT
Trigger: TGTCAAAGAGAGCTGTTTCCAGTGGGGACCCCAGGC...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGGCCGGGCGTACGTGGTaGGCCTGGGGTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRAGRTW*AWGPHW
Trigger: CCAGTGGGGACCCCAGGCCCACCACGTACGCCCGGC...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGAATCATGCAGGTACTaGTGGGAACAGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSESCRY*WEQCPR
Trigger: CCTGGGACACTGTTCCCACCAGTACCTGCATGATTC...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCAAGAGGCCGAGGCTGTaGGGAAGAGGTCTGACGTCG +
Preference number: 4 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFKRPRL*GRGLTS
Trigger: CGACGTCAGACCTCTTCCCCACAGCCTCGGCCTCTT...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450056.7
CDS-3UTR TCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTACTACAATTCTACAGTaGTCTCCAGAGACCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRATTILQ*SPETSL
Trigger: TAAACTGGTCTCTGGAGATCACTGTAGAATTGTAGT...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCGCAGGTCCTGGCAGATaGTGCATGTCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFAGPGR*CMSASP
Trigger: AGGAGACGCTGACATGCATCATCTGCCAGGACCTGC...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCTCCAGCAGGTCCTCTaGACTCCCTTCTTCATCAGA +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFLQQVL*TPFFIR
Trigger: TCTGATGAAGAAGGGAGTTCAGAGGACCTGCTGGAG...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
CDS-3UTR TCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCCTCCAGCAGGTCCTCTaGACTCCCTTCTTCATCAGA +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPLQQVL*TPFFIR
Trigger: TCTGATGAAGAAGGGAGTTCAGAGGACCTGCTGGAG...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
CDS-3UTR TCA 90 bp AGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCCTCACTGTCAACGTCTaGCAGCTCCAGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SRNVLPILIGQLTEAAQALTVNV*QLQQVL
Trigger: GAGGACCTGCTGGAGCTGTCAGACGTTGACAGTGAG...GGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000535527.5
CDS-3UTR TCA 90 bp GATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCACAGCAGTAACACAGAACTGCTGTCGTCAGGCTaGCGGACGTGGAGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: DTDRSAHGSCAGHSSNTELLSSG*RTWRVH
Trigger: ATGCACCCTCCACGTCCGTCAGCCTGACGACAGCAG...TTCTGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR TCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTTCCCTCAGGGGGCTGTaGAAACACCTTGACGTGCTT +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRSLRGL*KHLDVL
Trigger: AAGCACGTCAAGGTGTTTTCACAGCCCCCTGAGGGA...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR TCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCCAGCAGGTGACAGAGTaGCCATCACTAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAQQVTE*PSLAVR
Trigger: CCTCACTGCTAGTGATGGTCACTCTGTCACCTGCTG...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCCTTCTGGTGCTCAGCTaGAGACAAAGCCTCCACACT +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVLLVLS*RQSLHT
Trigger: AGTGTGGAGGCTTTGTCTTCAGCTGAGCACCAGAAG...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCACATGAAAAGACGGAATaGGTTCACGGCCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSHEKTE*VHGHLL
Trigger: AAGCAGGTGGCCGTGAACTCATTCCGTCTTTTCATG...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCATGAAAAGACGGAATaGGTTCACGGCCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPHEKTE*VHGHLL
Trigger: AAGCAGGTGGCCGTGAACTCATTCCGTCTTTTCATG...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGACTACTTATTTCTCATaGTTATATGCTGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGTTYFS*LYAGCL
Trigger: CAGGCAGCCAGCATATAATCATGAGAAATAAGTAGT...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTGAGGGGCTGTTTGTaGGAATTAGCTGGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASLRGCL*ELAGSV
Trigger: CACCGAACCAGCTAATTCTCACAAACAGCCCCTCAG...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGAGTGTCTGCTCTGTGTaGGGAACTTTAAGACCCCAC +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRSVCSV*GTLRPH
Trigger: GTGGGGTCTTAAAGTTCCTCACACAGAGCAGACACT...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCCCTGCACCTGCACCTaGGGTATCAAAGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASPCTCT*GIKGFL
Trigger: CAAGAATCCTTTGATACCTCAGGTGCAGGTGCAGGG...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGAGACCAGTTTATTaGTGGGGAAGGAAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPQRPVY*WGRKGR
Trigger: GCGACCTTTCCTTCCCCAGCAATAAACTGGTCTCTG...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCGGAGACTTCATCACTTaGCACAGAGGGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPGDFIT*HRGTTS
Trigger: GGAAGTGGTCCCTCTGTGGCAAGTGATGAAGTCTCC...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAATTTCTACGCGGTTGTaGGACCAACAACTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSISTRL*DQQLPV
Trigger: AACGGGCAGTTGTTGGTCGCACAACCGCGTAGAAAT...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGATGCTGGATGAGGTATaGTTCCACGAGGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGMLDEV*FHEVVE
Trigger: CTCAACAACCTCGTGGAAGCATACCTCATCCAGCAT...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCGACTCTTGTCTGGATaGTGGATGAGGTATGCTTCC +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPRLLSG*WMRYAS
Trigger: GGAAGCATACCTCATCCAGCATCCAGACAAGAGTCG...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCGCACATCTTCTTCACTaGGACTCTTGTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPAHLLH*DSCLDA
Trigger: AGCATCCAGACAAGAGTCGCAGTGAAGAAGATGTGC...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTTCCAGTGCTGAAAGCTaGTCAGGGCCTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRSSAES*SGPLDA
Trigger: AGCATCCAGAGGCCCTGAGCAGCTTTCAGCACTGGA...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCGTGAAGGCCGTGTGGTaGTGGGAGCAGCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIVKAVW*WEQPLD
Trigger: GTCCAGGGGCTGCTCCCAGCACCACACGGCCTTCAC...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCTGCAGGGCTAGGCTGTaGTCTGCATGCGGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRICRARL*SACGPP
Trigger: CGGAGGGCCGCATGCAGAGCACAGCCTAGCCCTGCA...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGTTCCTTCCACAGACATaGACGACCAAGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRFLPQT*TTKCLL
Trigger: GAGCAGACACTTGGTCGTGCATGTCTGTGGAAGGAA...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCGGTCTCACAAATGCATaGTCCCAGCACAGCGCACGG +
Preference number: 4 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFGLTNA*SQHSAR
Trigger: CCGTGCGCTGTGCTGGGAGCATGCATTTGTGAGACC...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGATCTGTTTTCTTTTCTaGTTCGACAGCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGICFLF*FDSLPS
Trigger: GGAGGGCAGGCTGTCGAAGCAGAAAAGAAAACAGAT...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGCTCGTCTCCGCCCGATaGTCCACTCCCGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRLVSAR*STPASS
Trigger: TGAGGAAGCGGGAGTGGACCATCGGGCGGAGACGAG...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGAGCTGAGGCAAAGCTaGAGACTTCATCACTTGCCA +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTELRQS*RLHHLP
Trigger: TGGCAAGTGATGAAGTCTCCAGCTTTGCCTCAGCTC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCGCTCTGACGTCCTCGTaGACGGTTTGGGCATTTCTA +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFALTSS*TVWAFL
Trigger: TAGAAATGCCCAAACCGTCCACGAGGACGTCAGAGC...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp TTACGGCCACTGGCAACTCGGAAGCAGGAATGTTCTGCCGATACTGATAGGTCACGGTCGGGCATGGGCTaGAAGCAGCAGGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LRPLATRKQECSADTDRSRSGMG*KQQVHR
Trigger: CCTGTGCACCTGCTGCTTCCAGCCCATGCCCGACCG...TGACCTATCAGTATCGGCAGAACATTCCTGCTTCCGAGTTGCCAGTGGCCGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR CCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGGGATGTTACGGCCACTaGCAACTCGGAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPAGCYGH*QLGSRN
Trigger: ATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACATCC...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR CCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGATAGATAAAATGCTGTaGTTTTCCCAGCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGIDKML*FSQQQD
Trigger: ATCCTGCTGCTGGGAAAACCACAGCATTTTATCTAT...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCTCTGCCCAGACTTCCTaGCTGCAGTCAGAAGCTATG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVSAQTS*LQSEAM
Trigger: CATAGCTTCTGACTGCAGCCAGGAAGTCTGGGCAGA...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCTCTGCCCAGACTTCCTaGCTGCAGTCAGAAGCTATG +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASSAQTS*LQSEAM
Trigger: CATAGCTTCTGACTGCAGCCAGGAAGTCTGGGCAGA...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGGCTGCCTCTCTGCCTTaGCCACACCCCTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGAASLP*PHPWGE
Trigger: TTCACCCCAGGGGTGTGGCCAAGGCAGAGAGGCAGC...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCCCCATCAAGCCAGGCTaGAGGGACGATCTACTTTCC +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAPIKPG*RDDLLS
Trigger: GGAAAGTAGATCGTCCCTCCAGCCTGGCTTGATGGG...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCGATAGTGACAGGTGCTaGGGGGAAACTAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVDSDRC*GETRLA
Trigger: AGCCAGTCTAGTTTCCCCCCAGCACCTGTCACTATC...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCCACGGCACTCACTCCTaGTCTGACTGGCCTTCAACA +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAHGTHS*SDWPST
Trigger: TGTTGAAGGCCAGTCAGACCAGGAGTGAGTGCCGTG...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGGGTGAAGGAACGTGCTaGGGAGCAGGGGAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PSGQQLELSVCHRDLELQGEGTC*GAGERV
Trigger: CACCCTCTCCCCTGCTCCCCAGCACGTTCCTTCACC...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGGAATCATGCAGGTACTaGTGGGAACAGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPAESCRY*WEQCPR
Trigger: CCTGGGACACTGTTCCCACCAGTACCTGCATGATTC...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCGAGATCCTCCTGTTTTaGCCTCCCAAACTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASEILLF*PPKLLG
Trigger: TCCCAGCAGTTTGGGAGGCCAAAACAGGAGGATCTC...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR TCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGTCTTCCAGTGTCACCTaGCCTGATTTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGSSSVT*PDFSST
Trigger: AGTGGATGAAAAATCAGGTCAGGTGACACTGGAAGA...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp ATCAGACAGCAGAAACACTCCCCGCTGGAGAGCCACGAGGCTCTCGGTCAACATTCTGTCTGGGAGAGCTaGGGCAAAGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: IRQQKHSPLESHEALGQHSVWES*GKAGDF
Trigger: GAAGTCTCCAGCTTTGCCTCAGCTCTCCCAGACAGA...ATGTTGACCGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCTGCTGTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR TCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTACTGCTGTCGTCAGGCTaGCGGACGTGGAGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLLLSSG*RTWRVH
Trigger: ATGCACCCTCCACGTCCGTCAGCCTGACGACAGCAG...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTAATCAGACAGCAGAAACACTCCCCGCTGGAGAGCCACGAGGCTCTCGGTCAATCCCTCAGGGGGCTGTaGAAACACCTTGACGTGCTT +
Preference number: 4 (lower is better)
Translates to: VIRQQKHSPLESHEALGQSLRGL*KHLDVL
Trigger: AAGCACGTCAAGGTGTTTTCACAGCCCCCTGAGGGA...TTGACCGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCTGCTGTCTGATTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
CDS-3UTR TCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCAGAATGAAGAGACCTaGGCAGGTTTCACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASQNEET*AGFTGV
Trigger: GACTCCTGTGAAACCTGCTCAGGTCTCTTCATTCTG...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCTGGGAAGGGGAAGAGTaGGTATCAACCGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASWEGEE*VSTDLS
Trigger: AGAGAGATCGGTTGATACTCACTCTTCCCCTTCCCA...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAACATGGAACACGTCATaGATTTGGGTGTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSTWNTS*IWVSCL
Trigger: CAGGCATGACACCCAAATTCATGACGTGTTCCATGT...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGCTCGGAAGTCCAAAATaGAGGGGCAGGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGLGSPK*RGRQGW
Trigger: CCAGCCCTGCCTGCCCCTTCATTTTGGACTTCCGAG...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCGAAAATAAAACTGGGTaGAGCGTTCGAGCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVENKTG*SVRARG
Trigger: CCCTCTCGCTCGAACGCTTCACCCAGTTTTATTTTC...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCATTTCTACGCGGTTGTaGGACCAACAACTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFISTRL*DQQLPV
Trigger: AACGGGCAGTTGTTGGTCGCACAACCGCGTAGAAAT...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTGCACATCTTCTTCACTaGGACTCTTGTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPAHLLH*DSCLDA
Trigger: AGCATCCAGACAAGAGTCGCAGTGAAGAAGATGTGC...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCTGGCATCCATACTTTaGACATCTTCTTCACTGCGA +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGLASIL*TSSSLR
Trigger: TCGCAGTGAAGAAGATGTGCAAAGTATGGATGCCAG...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGGCTGGAAGCAGCAGGTaGACAGGGCGTGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PSGQQLELSVCHRDLELQAGSSR*TGRGFL
Trigger: AAGGAAGCCACGCCCTGTGCACCTGCTGCTTCCAGC...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAACTCAGGGCCTCTGGATaGTTAGTTTTTGAACCTTGT +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKLRASG*LVFEPC
Trigger: ACAAGGTTCAAAAACTAAGCATCCAGAGGCCCTGAG...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGCCAGGAGGTGGAGGCTaGAGTGAGCTGACATTGCGC +
Preference number: 4 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGPGGGG*SELTLR
Trigger: GCGCAATGTCAGCTCACTGCAGCCTCCACCTCCTGG...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGCCAGGAGGTGGAGGCTaGAGTGAGCTGACATTGCGC +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRPGGGG*SELTLR
Trigger: GCGCAATGTCAGCTCACTGCAGCCTCCACCTCCTGG...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp AGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCAGGTGGCAGAAAGGCTaGAGGCAGACCGCACCTAAT +
Preference number: 4 (lower is better)
Translates to: SRNVLPILIGQLTEAAQARWQKG*RQTAPN
Trigger: ATTAGGTGCGGTCTGCCTGCAGCCTTTCTGCCACCT...GGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535527.5
CDS-3UTR CCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTACTCGTCTCCGCCCGATaGTCCACTCCCGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLLVSAR*STPASS
Trigger: TGAGGAAGCGGGAGTGGACCATCGGGCGGAGACGAG...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCCTGTTCCACTGGTGCTaGTATCTTCCAGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPLFHWC*YLPVSP
Trigger: AGGTGACACTGGAAGATACCAGCACCAGTGGAACAG...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCGAGCTGAGGCAAAGCTaGAGACTTCATCACTTGCCA +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVELRQS*RLHHLP
Trigger: TGGCAAGTGATGAAGTCTCCAGCTTTGCCTCAGCTC...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGAGGTTGTTGAGGATGTaGTTTTTACAGATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGRLLRM*FLQIRS
Trigger: GGAGCGGATCTGTAAAAACCACATCCTCAACAACCT...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCAGGTTGTTGAGGATGTaGTTTTTACAGATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPRLLRM*FLQIRS
Trigger: GGAGCGGATCTGTAAAAACCACATCCTCAACAACCT...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCACTGCGACTCTTGTCTaGATGCTGGATGAGGTATGC +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFTATLV*MLDEVC
Trigger: GCATACCTCATCCAGCATCCAGACAAGAGTCGCAGT...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCACTGCGACTCTTGTCTaGATGCTGGATGAGGTATGC +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPTATLV*MLDEVC
Trigger: GCATACCTCATCCAGCATCCAGACAAGAGTCGCAGT...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCGGATGTTACGGCCACTaGCAACTCGGAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAGCYGH*QLGSRN
Trigger: ATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACATCC...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TCAGACAGCAGAAACACTCCCCGCTGGAGAGCCACGAGGCTCTCGGTCAACATGGGATGTTACGGCCACTaGCAACTCGGAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SDSRNTPRWRATRLSVNMGCYGH*QLGSRN
Trigger: ATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACATCC...CATGTTGACCGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCTGCTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
CDS-3UTR CCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTAAATCCTCTTCACAGTaGGCCAGGAGTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPKSSSQ*ARSWTS
Trigger: AGAAGTCCAACTCCTGGCCCACTGTGAAGAGGATTT...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTACTGCCAGCCCGAAGCTaGGGGGCTGTCACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLLPARS*GAVTRK
Trigger: TTTCCTGGTGACAGCCCCCCAGCTTCGGGCTGGCAG...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCCTGCCAGCCCGAAGCTaGGGGGCTGTCACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRILPARS*GAVTRK
Trigger: TTTCCTGGTGACAGCCCCCCAGCTTCGGGCTGGCAG...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGGGAATCCCAGCACTGTaGGAGGTAGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGGIPAL*EVEAGR
Trigger: TCTGCCCGCCTCTACCTCCCACAGTGCTGGGATTCC...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGGGCTACCATCTGCATaGGGCCGTCATTCATATTTA +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTGLPSA*GRHSYL
Trigger: TAAATATGAATGACGGCCCCATGCAGATGGTAGCCC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCCAAAGCACACCTGAGTaGCGGGCGACGACGGAGGGA +
Preference number: 4 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIQSTPE*RATTEG
Trigger: TCCCTCCGTCGTCGCCCGCCACTCAGGTGTGCTTTG...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450056.7
CDS-3UTR TCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCTGTCTGGATGCTGGATaGGGTATGCTTCCACGAGGT +
Preference number: 4 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFCLDAG*GMLPRG
Trigger: ACCTCGTGGAAGCATACCTCATCCAGCATCCAGACA...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCGGCTGCAGCATGTCTTaGGTGATTTTATTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTGCSMS*VILFLA
Trigger: TGCCAGAAATAAAATCACTCAAGACATGCTGCAGCC...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGCTGCAGCATGTCTTaGGTGATTTTATTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRGCSMS*VILFLA
Trigger: TGCCAGAAATAAAATCACTCAAGACATGCTGCAGCC...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCGGAGGAGGGTTGGCCTaGATCCCTCAGTCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFGGGLA*IPQSVL
Trigger: TAAAACAGACTGAGGGATTCAGGCCAACCCTCCTCC...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGGAAGAGAAGATGACGTaGGAACTCAAGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPAEEKMT*ELKEML
Trigger: CAGCATCTCCTTGAGTTCTCACGTCATCTTCTCTTC...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTGTAAAGGGCATGTCTaGTTCTTAACAACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: APQKSHPRAPVGDPASLPCKGHV*FLTTFS
Trigger: GCTGAAGGTTGTTAAGAAGCAGACATGCCCTTTACA...GGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp TCTCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGTCTTGTGTCATGCCTTaGTTTTCACTTAAAGATTCA +
Preference number: 4 (lower is better)
Translates to: SLLLMPPRALPSAHQEGGSCVMP*FSLKDS
Trigger: TGAATCTTTAAGTGAAAAGCAAGGCATGACACAAGA...CCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCACAGCAGTAACACAGAACGCAGAACGTGTGCATaGAGGGCTGCAAACTCACGC +
Preference number: 4 (lower is better)
Translates to: DTDRSAHGSCAGHSSNTERRTCA*RAANSR
Trigger: GCGTGAGTTTGCAGCCCTGCATGCACACGTTCTGCG...TTCTGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR GCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCATGCTGGATGAGGTATaGTTCCACGAGGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPMLDEV*FHEVVE
Trigger: CTCAACAACCTCGTGGAAGCATACCTCATCCAGCAT...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCATGCTGGATGAGGTATaGTTCCACGAGGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASMLDEV*FHEVVE
Trigger: CTCAACAACCTCGTGGAAGCATACCTCATCCAGCAT...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AGCACGCCGTCCAGACACTTGTCACCCAGGTTGAGCTCTGCCGAGATGAAGGGGGCACATCTTCTTCACTaGGACTCTTGTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: STPSRHLSPRLSSAEMKGAHLLH*DSCLDA
Trigger: AGCATCCAGACAAGAGTCGCAGTGAAGAAGATGTGC...CCCCTTCATCTCGGCAGAGCTCAACCTGGGTGACAAGTGTCTGGACGGCGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR GCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCAGGTGGCAGAAAGGCTaGAGGCAGACCGCACACTGC +
Preference number: 4 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIRWQKG*RQTAHC
Trigger: GCAGTGTGCGGTCTGCCTGCAGCCTTTCTGCCACCT...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TCAGGATGTCTGACTCGTAGCTGTTGTTGTTCAGCACGCCGTCCAGACACTTGTAGGTGGCAGAAAGGCTaGAGGCAGACCGCACACTGC +
Preference number: 4 (lower is better)
Translates to: SGCLTRSCCCSARRPDTCRWQKG*RQTAHC
Trigger: GCAGTGTGCGGTCTGCCTGCAGCCTTTCTGCCACCT...ACAAGTGTCTGGACGGCGTGCTGAACAACAACAGCTACGAGTCAGACATCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR GCA 90 bp GACGGGATGTTACGGCCACTGGCAACTCGGAAGCAGGAATGTTCTGCCGATACTTCCAGTGCTGAAAGCTaGTCAGGGCCTCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: DGMLRPLATRKQECSADTSSAES*SGPLDA
Trigger: AGCATCCAGAGGCCCTGAGCAGCTTTCAGCACTGGA...AGTATCGGCAGAACATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACATCCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGACAAAAGAGCAAAACTaGCCCTCTCGGCGGGACGGC +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRTKEQN*PSRRDG
Trigger: GCCGTCCCGCCGAGAGGGGCAGTTTTGCTCTTTTGT...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCACAGCAGTAACACAGAAACAAAAGAGCAAAACTaGCCCTCTCGGCGGGACGGC +
Preference number: 4 (lower is better)
Translates to: DTDRSAHGSCAGHSSNTETKEQN*PSRRDG
Trigger: GCCGTCCCGCCGAGAGGGGCAGTTTTGCTCTTTTGT...TTCTGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000544093.5
CDS-3UTR GCA 90 bp TCTGCTGCTGATGCCACCACGAGCCCTGCCCAGCGCTCACCAGGAGGGCGGGCTCTAAAAACAGACTTCTaGTTTAACTGTAGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: SAADATTSPAQRSPGGRALKTDF*FNCSFG
Trigger: TCCGAAACTACAGTTAAAGCAGAAGTCTGTTTTTAG...AGCCCGCCCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCATCAGCAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000544093.5
CDS-3UTR GCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCTGTGGCTTCTTCTGGTaGTCAGCTGAAGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREACGFFW*SAEDKA
Trigger: GGCTTTGTCTTCAGCTGAGCACCAGAAGAAGCCACA...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGAGAAGCAGTGGGATCTaGAGCAGCACCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PSGQQLELSVCHRDLELQRSSGI*SSTRLS
Trigger: GGACAGCCTGGTGCTGCTGCAGATCCCACTGCTTCT...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCTTCCTTCCACAGACATaGACGACCAAGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAFLPQT*TTKCLL
Trigger: GAGCAGACACTTGGTCGTGCATGTCTGTGGAAGGAA...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGTTGGGTGCTCAGCCATaGCCCACACTCCACCTCCAA +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRLGAQP*PTLHLQ
Trigger: TTGGAGGTGGAGTGTGGGGCATGGCTGAGCACCCAA...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTAGAGCTGAGTGTCTaGCACAGAGACCTAGAGCTA +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPLELSV*HRDLEL
Trigger: TAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAA...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCAGAAGGATCCTTCTTaGATTCACTCCCTATCCCCT +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASQKDPS*IHSLSP
Trigger: AGGGGATAGGGAGTGAATGCAAGAAGGATCCTTCTG...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCACAGCAGTTCCTCGTGGACGGTTTaGGCATTTCTACGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: CSADTDRSAHGSCAGHSSSSWTV*AFLRGC
Trigger: ACAACCGCGTAGAAATGCCCAAACCGTCCACGAGGA...ACTGCTGTGGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR CCA 90 bp GTAATCAGACAGCAGAAACACTCCCCGCTGGAGAGCCACGAGGCTCTCGGTCAAGCTCTGACGTCCTCGTaGACGGTTTGGGCATTTCTA +
Preference number: 4 (lower is better)
Translates to: VIRQQKHSPLESHEALGQALTSS*TVWAFL
Trigger: TAGAAATGCCCAAACCGTCCACGAGGACGTCAGAGC...TTGACCGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCTGCTGTCTGATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR CCA 90 bp TGCTTGTCTCTGTATTTTAAAAACACGCTCTCTTCACCTCCAGTGCTGAAAGCTGGCCTGTGGGGCTCCTaGCTCGCCCTCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLSLYFKNTLSSPPVLKAGLWGS*LALGCW
Trigger: CCAGCACCCGAGGGCGAGCCAGGAGCCCCACAGGCC...AGCTTTCAGCACTGGAGGTGAAGAGAGCGTGTTTTTAAAATACAGAGACAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CCACAAGCTAATCCAGGATCCTCCCCTCATCTCAAGGTCCTTAATTCCACCATACGGTCGGGCATGGGCTaGAAGCAGCAGGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: PQANPGSSPHLKVLNSTIRSGMG*KQQVHR
Trigger: CCTGTGCACCTGCTGCTTCCAGCCCATGCCCGACCG...TATGGTGGAATTAAGGACCTTGAGATGAGGGGAGGATCCTGGATTAGCTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCTGCAAACTCCCCTTTTaGCTTCATCCATGCACAAAC +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLCKLPF*LHPCTN
Trigger: GTTTGTGCATGGATGAAGCCAAAAGGGGAGTTTGCA...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGAAATCCTCTTCACAGTaGGCCAGGAGTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPAKSSSQ*ARSWTS
Trigger: AGAAGTCCAACTCCTGGCCCACTGTGAAGAGGATTT...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGGCCGGTCAGTTTTGCTaGGTGGGATGGCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PSGQQLELSVCHRDLELQAGQFC*VGWLGL
Trigger: AAGACCCAGCCATCCCACCCAGCAAAACTGACCGGC...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCACAAATAAACAACAGTaGGCAGACAGGCAAGATCCC +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTTNKQQ*ADRQDP
Trigger: GGGATCTTGCCTGTCTGCCCACTGTTGTTTATTTGT...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCATGGTATCCAGCATGTaGGGTTTGCCAAACAACAAC +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLMVSSM*GLPNNN
Trigger: GTTGTTGTTTGGCAAACCCCACATGCTGGATACCAT...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCACCACGGAGTGTCAATaGTATCCAGCATGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREATTECQ*YPACGV
Trigger: AACCCCACATGCTGGATACCATTGACACTCCGTGGT...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGCACCTGAGGTATCTTTaGTCCCATGGAACACATTTT +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGHLRYL*SHGTHF
Trigger: AAAATGTGTTCCATGGGACCAAAGATACCTCAGGTG...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432561.6
3UTR CAA 72 bp TTGTTCAGCACGCCGTCCAGACACTTGTCACCCAGGTaGAGCTCTGCCGAGATGAAGGGGCAATGTTACCTG +
Preference number: 4 (lower is better)
Translates to: LFSTPSRHLSPR*SSAEMKGQCYL
Trigger: CAGGTAACATTGCCCCTTCATCTCGGCAGAGCTCAACCTGGGTGACAAGTGTCTGGACGGCGTGCTGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR TCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTGTACACCAAGTAGATaGCATCCCCAGTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPACTPSR*HPQSVK
Trigger: CTTTACAGACTGGGGATGTCATCTACTTGGTGTACA...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCTGTACACCAAGTAGATaGCATCCCCAGTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVCTPSR*HPQSVK
Trigger: CTTTACAGACTGGGGATGTCATCTACTTGGTGTACA...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCTGTACACCAAGTAGATaGCATCCCCAGTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFCTPSR*HPQSVK
Trigger: CTTTACAGACTGGGGATGTCATCTACTTGGTGTACA...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGTCTGTCTGGGAGAGCTaGGGCAAAGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGSVWES*GKAGDF
Trigger: GAAGTCTCCAGCTTTGCCTCAGCTCTCCCAGACAGA...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TCAGGATGTCTGACTCGTAGCTGTTGTTGTTCAGCACGCCGTCCAGACACTTGTGGCTCCAAATCCTCCTaGTCCTGGGGTTCCAACGAC +
Preference number: 4 (lower is better)
Translates to: SGCLTRSCCCSARRPDTCGSKSS*SWGSND
Trigger: GTCGTTGGAACCCCAGGATCAGGAGGATTTGGAGCC...ACAAGTGTCTGGACGGCGTGCTGAACAACAACAGCTACGAGTCAGACATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR TCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCGCAGGTCCTGGCAGATaGTGCATGTCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRIAGPGR*CMSASP
Trigger: AGGAGACGCTGACATGCATCATCTGCCAGGACCTGC...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCACGAGGTTGTTaGGGATGTGGTTTTTACAGA +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASLPRGC*GCGFYR
Trigger: TCTGTAAAAACCACATCCTCAACAACCTCGTGGAAG...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCGGCTGCAGCATGTCTTaGGTGATTTTATTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASGCSMS*VILFLA
Trigger: TGCCAGAAATAAAATCACTCAAGACATGCTGCAGCC...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGGGCTGCAGCATGTCTTaGGTGATTTTATTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPAGCSMS*VILFLA
Trigger: TGCCAGAAATAAAATCACTCAAGACATGCTGCAGCC...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTACTCACTGTCAACGTCTaGCAGCTCCAGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLLTVNV*QLQQVL
Trigger: GAGGACCTGCTGGAGCTGTCAGACGTTGACAGTGAG...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CTCGGAAGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGTGGCTGGCTAATGTCTaGGGACTCACTGTCAACGTC +
Preference number: 4 (lower is better)
Translates to: LGSRNVLPILIGQLTEAAWLANV*GLTVNV
Trigger: GACGTTGACAGTGAGTCCTCAGACATTAGCCAGCCA...CGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCTTCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR TCA 90 bp GACGGGATGTTACGGCCACTGGCAACTCGGAAGCAGGAATGTTCTGCCGATACTGAACGGTGTCTCCCGTaGCTCTGTAATCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: DGMLRPLATRKQECSADTERCLP*LCNQTA
Trigger: TGCTGTCTGATTACAGAGTCACGGGAGACACCGTTC...AGTATCGGCAGAACATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACATCCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
CDS-3UTR TCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCACATGGAACACGTCATaGATTTGGGTGTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREATWNTS*IWVSCL
Trigger: CAGGCATGACACCCAAATTCATGACGTGTTCCATGT...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTAGACTGGACCCTTCCTaGAAACAAAAACCAAACGGG +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRRLDPS*KQKPNG
Trigger: CCCGTTTGGTTTTTGTTTTCAGGAAGGGTCCAGTCT...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TGCTTGTCTCTGTATTTTAAAAACACGCTCTCTTCACCTCCAGTGCTGAAAGCTGAACCCGGAACCGGCTaGGCCGCCGCCGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: CLSLYFKNTLSSPPVLKAEPGTG*AAAAVK
Trigger: CTTGACAGCGGCGGCGGCGCAGCCGGTTCCGGGTTC...AGCTTTCAGCACTGGAGGTGAAGAGAGCGTGTTTTTAAAATACAGAGACAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CTTATGCTCCCTTCTCCTGAAACAATGTTTTTGATAAACTTGCCCTTCTCCCTTAGCCGTCCCCAGGGCTaGGGCGGCGGCGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: LMLPSPETMFLINLPFSLSRPQG*GGGDCL
Trigger: CAAGCAGTCGCCGCCGCCGCAGCCCTGGGGACGGCT...AAGGGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGGAGAAGGGAGCATAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCGCCGCGCAGAACGTGTaGATGCAGGGCTGCAAACTC +
Preference number: 4 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFAAQNV*MQGCKL
Trigger: GAGTTTGCAGCCCTGCATGCACACGTTCTGCGCGGC...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCACAGCCGACTCTTGTCTGGATaGTGGATGAGGTATGCTTCC +
Preference number: 4 (lower is better)
Translates to: ECSADTDRSAHGSCAGHSRLLSG*WMRYAS
Trigger: GGAAGCATACCTCATCCAGCATCCAGACAAGAGTCG...GCTGTGGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR GCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCCTGGCATCCATACTTTaGACATCTTCTTCACTGCGA +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPLASIL*TSSSLR
Trigger: TCGCAGTGAAGAAGATGTGCAAAGTATGGATGCCAG...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCTGGCATCCATACTTTaGACATCTTCTTCACTGCGA +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFLASIL*TSSSLR
Trigger: TCGCAGTGAAGAAGATGTGCAAAGTATGGATGCCAG...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGCACGTAATCCTGGACTaGTGTCGTCAGGCTGACGGA +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRHVILD*CRQADG
Trigger: TCCGTCAGCCTGACGACAGCAGTCCAGGATTACGTG...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTTGTCAAACCTCTGGTTaGCAGGTAATTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPCQTSG*QVILQD
Trigger: ATCCTGAAGAATTACCTGGCAACCAGAGGTTTGACA...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
CDS-3UTR GCA 90 bp TGTTACGGCCACTGGCAACTCGGAAGCAGGAATGTTCTGCCGATACTGATAGGTACAAAAGAGCAAAACTaGCCCTCTCGGCGGGACGGC +
Preference number: 4 (lower is better)
Translates to: CYGHWQLGSRNVLPILIGTKEQN*PSRRDG
Trigger: GCCGTCCCGCCGAGAGGGGCAGTTTTGCTCTTTTGT...ACCTATCAGTATCGGCAGAACATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000544093.5
CDS-3UTR GCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGTCTCAGCCCCACCCTTaGACAAACTCAGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRSQPHP*TNSGSL
Trigger: CAGAGACCCTGAGTTTGTGCAAGGGTGGGGCTGAGA...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTATCACCAGGAAACCCTTaGTGGCGGAAGCCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLSPGNP*WRKPLP
Trigger: TGGAAGGGGCTTCCGCCAGCAAGGGTTTCCTGGTGA...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTACTGGCTGGAGGCCCTTaGTCCCTCTGCAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLLAGGP*SLCKAH
Trigger: ATGTGCTTTGCAGAGGGAGCAAGGGCCTCCAGCCAG...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCGTTACCTCAGAAGGATCCTGACATTGCGCCACTaGCCTCCAGCCCTGACAACA +
Preference number: 4 (lower is better)
Translates to: CTHHSNPVSGYFRYLRRILTLRH*PPALTT
Trigger: TGTTGTCAGGGCTGGAGGGCAGTGGCGCAATGTCAG...GATCCTTCTGAGGTAACGGAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CACTGGCAACTCGGAAGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGTCGTGCAGCAGGTCCTaGCAGATGATGCATGTCAGC +
Preference number: 4 (lower is better)
Translates to: HWQLGSRNVLPILIGQLTSCSRS*QMMHVS
Trigger: GCTGACATGCATCATCTGCCAGGACCTGCTGCACGA...CGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCTTCCGAGTTGCCAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR CCA 90 bp GAGGGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGAGGTTGTTGAGGATGTaGTTTTTACAGATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: EGKAPQKSHPRAPVGDPARLLRM*FLQIRS
Trigger: GGAGCGGATCTGTAAAAACCACATCCTCAACAACCT...CGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp ACTTTCCTCCACAAATACAGATTGCTGCTTCTCAGTTTCTATCAAGAGCAAGACCTCGCCCTCGGGTGCTaGGCAGTGGGGAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: TFLHKYRLLLLSFYQEQDLALGC*AVGRLR
Trigger: GCGCAGCCTCCCCACTGCCCAGCACCCGAGGGCGAG...GTCTTGCTCTTGATAGAAACTGAGAAGCAGCAATCTGTATTTGTGGAGGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp ATGCTCCCTTCTCCTGAAACAATGTTTTTGATAAACTTGCCCTTCTCCCTTGAAGGCCTGTGGGGCTCCTaGCTCGCCCTCGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: MLPSPETMFLINLPFSLEGLWGS*LALGCW
Trigger: CCAGCACCCGAGGGCGAGCCAGGAGCCCCACAGGCC...TTCAAGGGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGGAGAAGGGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGTCCATGTCAAACCTCTaGTTGCCAGGTAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRSMSNL*LPGNSS
Trigger: TGAAGAATTACCTGGCAACCAGAGGTTTGACATGGA...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
ENST00000535527.5
CDS-3UTR CCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCAGAAACACTCCCCGCTaGAGAGCCACGAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFRNTPR*RATRLS
Trigger: CGAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCT...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CTCGGAAGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGGGATGTTACGGCCACTaGCAACTCGGAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LGSRNVLPILIGQLTEAAGCYGH*QLGSRN
Trigger: ATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACATCC...CGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCTTCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
CDS-3UTR CCA 90 bp ACTTTCCTCCACAAATACAGATTGCTGCTTCTCAGTTTCTATCAAGAGCAAGACGGGAGCGGCGCGTCCTaGGACCTGCCTCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TFLHKYRLLLLSFYQEQDGSGAS*DLPPAL
Trigger: CAGGGCTGGAGGCAGGTCCCAGGACGCGCCGCTCCC...GTCTTGCTCTTGATAGAAACTGAGAAGCAGCAATCTGTATTTGTGGAGGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCATTGTGGCTTCTTCTaGTGCTCAGCTGAAGACAAA +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFHCGFF*CSAEDK
Trigger: TTTGTCTTCAGCTGAGCACCAGAAGAAGCCACAATG...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGAACAGCCTTTGTAGCTaGCCTAGGGAGGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRNSLCS*PREEGW
Trigger: CCAACCCTCCTCCCTAGGCCAGCTACAAAGGCTGTT...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCATGGTATCCAGCATGTaGGGTTTGCCAAACAACAAC +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASMVSSM*GLPNNN
Trigger: GTTGTTGTTTGGCAAACCCCACATGCTGGATACCAT...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCTCCATGTCAAACCTCTaGTTGCCAGGTAATTCTGTT +
Preference number: 4 (lower is better)
Translates to: STEESPQSTCRRPCVPSLSMSNL*LPGNSV
Trigger: AACAGAATTACCTGGCAACCAGAGGTTTGACATGGA...GAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544093.5
CDS-3UTR TCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGACTACAATTCTACAGTaGTCTCCAGAGACCAGTTTA +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRTTILQ*SPETSL
Trigger: TAAACTGGTCTCTGGAGATCACTGTAGAATTGTAGT...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCTTCCACGAGGTTGTTaGGGATGTGGTTTTTACAGA +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRLPRGC*GCGFYR
Trigger: TCTGTAAAAACCACATCCTCAACAACCTCGTGGAAG...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp AGAATATGCAAAAGAGAGGACTTTCCTCCACAAATACAGATTGCTGCTTCTCAGGCCACACCCCTGGGGTaGAGGCCGTGTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RICKREDFPPQIQIAASQATPLG*RPCGAG
Trigger: CCCAGCACCACACGGCCTTCACCCCAGGGGTGTGGC...CTGAGAAGCAGCAATCTGTATTTGTGGAGGAAAGTCCTCTCTTTTGCATATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCGGAAACAGCTCTCTTTaGCAACATGAATCTGGGATG +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREAGNSSL*QHESGM
Trigger: CATCCCAGATTCATGTTGTCAAAGAGAGCTGTTTCC...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ACTTTCCTCCACAAATACAGATTGCTGCTTCTCAGTTTCTATCAAGAGCAAGACGAACCCGGAACCGGCTaGGCCGCCGCCGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: TFLHKYRLLLLSFYQEQDEPGTG*AAAAVK
Trigger: CTTGACAGCGGCGGCGGCGCAGCCGGTTCCGGGTTC...GTCTTGCTCTTGATAGAAACTGAGAAGCAGCAATCTGTATTTGTGGAGGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp ACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAAGGATTCTTGTGTCATaGCTTGCTTTTCACTTAAAG +
Preference number: 4 (lower is better)
Translates to: TPEHLSETLRPFPQGAVKRILVS*LAFHLK
Trigger: CTTTAAGTGAAAAGCAAGGCATGACACAAGAATCCT...TTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCCTGGCATCCATACTTTaGACATCTTCTTCACTGCGA +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREALASIL*TSSSLR
Trigger: TCGCAGTGAAGAAGATGTGCAAAGTATGGATGCCAG...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CAACATGTTTTTCCATGTCAAACCTCTGGTTGCCAGGTAATTCTTCAGGATGTCAGCAGCCGGTCCGGGTaGAGCCCCAGTACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QHVFPCQTSGCQVILQDVSSRSG*SPSTGG
Trigger: GCCACCTGTACTGGGGCTGCACCCGGACCGGCTGCT...GACATCCTGAAGAATTACCTGGCAACCAGAGGTTTGACATGGAAAAACATGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000535527.5
CDS-3UTR GCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCCTCAGGGCCTCTGGATaGTTAGTTTTTGAACCTTGT +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREALRASG*LVFEPC
Trigger: ACAAGGTTCAAAAACTAAGCATCCAGAGGCCCTGAG...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGGGCGGGTCTCACAAATaGATGCTCCCAGCACAGCGC +
Preference number: 4 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRGGSHK*MLPAQR
Trigger: GCGCTGTGCTGGGAGCATGCATTTGTGAGACCCGCC...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CTCGGAAGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCTGTTCCACTGGTGCTaGTATCTTCCAGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: LGSRNVLPILIGQLTEAALFHWC*YLPVSP
Trigger: AGGTGACACTGGAAGATACCAGCACCAGTGGAACAG...CGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCTTCCGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR CCA 90 bp GACGGGATGTTACGGCCACTGGCAACTCGGAAGCAGGAATGTTCTGCCGATACTGAGCTGAGGCAAAGCTaGAGACTTCATCACTTGCCA +
Preference number: 4 (lower is better)
Translates to: DGMLRPLATRKQECSADTELRQS*RLHHLP
Trigger: TGGCAAGTGATGAAGTCTCCAGCTTTGCCTCAGCTC...AGTATCGGCAGAACATTCCTGCTTCCGAGTTGCCAGTGGCCGTAACATCCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR CCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGTCCTCGTGGACGGTTTaGGCATTTCTACGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRSSWTV*AFLRGC
Trigger: ACAACCGCGTAGAAATGCCCAAACCGTCCACGAGGA...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTAGGTTGTTGAGGATGTaGTTTTTACAGATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRRLLRM*FLQIRS
Trigger: GGAGCGGATCTGTAAAAACCACATCCTCAACAACCT...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTATAGATAAAATGCTGTaGTTTTCCCAGCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LHRRVTPEHLSETLRPFPIDKML*FSQQQD
Trigger: ATCCTGCTGCTGGGAAAACCACAGCATTTTATCTAT...AGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp CCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCACCACCCCAAATGCAGTaGCTTAAACAACTACTTATT +
Preference number: 4 (lower is better)
Translates to: PQKSHPRAPVGDPASLPSPPQMQ*LKQLLI
Trigger: AATAAGTAGTTGTTTAAGCCACTGCATTTGGGGTGG...TGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGAGGGGTCATACATGCTaGGCCTTCAAGGGCCATGAT +
Preference number: 4 (lower is better)
Translates to: PSGQQLELSVCHRDLELQRGHTC*AFKGHD
Trigger: ATCATGGCCCTTGAAGGCCCAGCATGTATGACCCCT...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCCTCTGCAAAGCACATCCCTCCCACCTCTTCTCTGTCACCAAGCCTCCTCTTCCGTTCAGTAGCCAACTaGTCAGTGATCAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: PSAKHIPPTSSLSPSLLFRSVAN*SVISRC
Trigger: GCATCTACTGATCACTGACCAGTTGGCTACTGAACG...GAAGAGGAGGCTTGGTGACAGAGAAGAGGTGGGAGGGATGTGCTTTGCAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTACCTCTGAGACAGACTaGACCCTTCCTGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRTSETD*TLPENK
Trigger: TTTGTTTTCAGGAAGGGTCCAGTCTGTCTCAGAGGT...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCACCTCTGAGACAGACTaGACCCTTCCTGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREATSETD*TLPENK
Trigger: TTTGTTTTCAGGAAGGGTCCAGTCTGTCTCAGAGGT...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AAGCAGGAATGTTCTGCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCATGAGCCACCGTGCCTaGCCTGAATATCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: KQECSADTDRSAHGSCAGMSHRA*PEYQHS
Trigger: AGAATGCTGATATTCAGGCCAGGCACGGTGGCTCAT...GCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGCAGAACATTCCTGCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
3UTR CAA 72 bp CGCTGCACGATACTCCAGTGTCTGGATACACCCATTTaGTCTGTCCATGCATCAGCTGATGGACCCACTGAG +
Preference number: 4 (lower is better)
Translates to: RCTILQCLDTPI*SVHASADGPTE
Trigger: CTCAGTGGGTCCATCAGCTGATGCATGGACAGACAAAATGGGTGTATCCAGACACTGGAGTATCGTGCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCACTACAATTCTACAGTaGTCTCCAGAGACCAGTTTA +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFTTILQ*SPETSL
Trigger: TAAACTGGTCTCTGGAGATCACTGTAGAATTGTAGT...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp GACTCTGTAATCAGACAGCAGAAACACTCCCCGCTGGAGAGCCACGAGGCTCTCTCTTCCAGTGTCACCTaGCCTGATTTTTCATCCACT +
Preference number: 4 (lower is better)
Translates to: DSVIRQQKHSPLESHEALSSSVT*PDFSST
Trigger: AGTGGATGAAAAATCAGGTCAGGTGACACTGGAAGA...GAGAGCCTCGTGGCTCTCCAGCGGGGAGTGTTTCTGCTGTCTGATTACAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR TCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTATGTCTGGATGCTGGATaGGGTATGCTTCCACGAGGT +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLCLDAG*GMLPRG
Trigger: ACCTCGTGGAAGCATACCTCATCCAGCATCCAGACA...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AGGGCCATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGGCTGACCCCCGCTTCTaGGGGGCACCAGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: RAMIWLSLLCNKPPQMQWADPRF*GAPGST
Trigger: TGTGCTCCCTGGTGCCCCTCAGAAGCGGGGGTCAGC...CCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp ACTTTCCTCCACAAATACAGATTGCTGCTTCTCAGTTTCTATCAAGAGCAAGACGCTGACCCCCGCTTCTaGGGGGCACCAGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: TFLHKYRLLLLSFYQEQDADPRF*GAPGST
Trigger: TGTGCTCCCTGGTGCCCCTCAGAAGCGGGGGTCAGC...GTCTTGCTCTTGATAGAAACTGAGAAGCAGCAATCTGTATTTGTGGAGGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGAATCATATACTAAGTTaGTGGCACAGTGTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRNHILS*WHSVGK
Trigger: TTTTCCCACACTGTGCCATCAACTTAGTATATGATT...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp ACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGCCAGTTACTGGGAGTTaGTCATTATACATTGTATGT +
Preference number: 4 (lower is better)
Translates to: TEESPQSTCRRPCVPSLRPVTGS*SLYIVC
Trigger: ACATACAATGTATAATGATCAACTCCCAGTAACTGG...CCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTTCCTCAAAGCACACCTaGGTGGCGGGCGACGACGGA +
Preference number: 4 (lower is better)
Translates to: VISRCCPGAKHFRQINNSSSKHT*VAGDDG
Trigger: TCCGTCGTCGCCCGCCACTCAGGTGTGCTTTGAGGA...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGTCTTGTGTCATGCCTTaGTTTTCACTTAAAGATTCA +
Preference number: 4 (lower is better)
Translates to: QKSHPRAPVGDPASLPSGSCVMP*FSLKDS
Trigger: TGAATCTTTAAGTGAAAAGCAAGGCATGACACAAGA...CCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAGGAGACTTCATCACTTaGCACAGAGGGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLGDFIT*HRGTTS
Trigger: GGAAGTGGTCCCTCTGTGGCAAGTGATGAAGTCTCC...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGCGACTCTTGTCTGGATaGTGGATGAGGTATGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRRLLSG*WMRYAS
Trigger: GGAAGCATACCTCATCCAGCATCCAGACAAGAGTCG...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ATAGGTCAGCTCACGGAAGCTGCGCAGGCCACAGCAGTAACACAGAACGGTGTCCTCAGGGCCTCTGGATaGTTAGTTTTTGAACCTTGT +
Preference number: 4 (lower is better)
Translates to: IGQLTEAAQATAVTQNGVLRASG*LVFEPC
Trigger: ACAAGGTTCAAAAACTAAGCATCCAGAGGCCCTGAG...GACACCGTTCTGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAGCTGACCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315585.11
ENST00000535527.5
ENST00000544093.5
CDS-3UTR GCA 90 bp ACATGTTTTTCCATGTCAAACCTCTGGTTGCCAGGTAATTCTTCAGGATGTCTGACCTGTCGGAGACCCTaGGTCCCTTCCCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TCFSMSNLWLPGNSSGCLTCRRP*VPSLRG
Trigger: CCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGT...CAGACATCCTGAAGAATTACCTGGCAACCAGAGGTTTGACATGGAAAAACATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000535527.5
CDS-3UTR GCA 90 bp AGGGCCTCTGGATGCTTAGTTTTTGAACCTTGTCTGTTCACAGATATGATTGAATGCCACCACGAGCCCTaGCCAGCGCTCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RASGCLVFEPCLFTDMIECHHEP*PALTRR
Trigger: CCTCCTGGTGAGCGCTGGGCAGGGCTCGTGGTGGCA...TTCAATCATATCTGTGAACAGACAAGGTTCAAAAACTAAGCATCCAGAGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000544093.5
CDS-3UTR GCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTACTCGGAGCTCACTCTaGATGGGGCCTGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VISRCCPGAKHFRQINNSTRSSL*MGPASL
Trigger: GAGGGAGGCAGGCCCCATGCAGAGTGAGCTCCGAGT...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGCACTTCATTGGCGAATaGCAGCCTCCCCTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRHFIGE*QPPLSA
Trigger: GGCTGAGAGGGGAGGCTGGCATTCGCCAATGAAGTG...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCATAGATAAAATGCTGTaGTTTTCCCAGCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: VKLHRRVTPEHLSETLRPIDKML*FSQQQD
Trigger: ATCCTGCTGCTGGGAAAACCACAGCATTTTATCTAT...GGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR CCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAAGGGTCTCTGCATTGTaGCTTCTTCTGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLRVSAL*LLLVLS
Trigger: GCTGAGCACCAGAAGAAGCCACAATGCAGAGACCCT...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCACAAGCTAATCCAGGATCCTCCCCTCATCTCAAGGTCCTTAATTCCACCATAGGCTCCTTACCACGCTaGGAGGATAACTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PQANPGSSPHLKVLNSTIGSLPR*EDNCPA
Trigger: AGCAGGGCAGTTATCCTCCCAGCGTGGTAAGGAGCC...TATGGTGGAATTAAGGACCTTGAGATGAGGGGAGGATCCTGGATTAGCTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp ACTTTCCTCCACAAATACAGATTGCTGCTTCTCAGTTTCTATCAAGAGCAAGACCCCCCTTCCCTGGCTTaGAGCCTGGGCAGCACACGG +
Preference number: 4 (lower is better)
Translates to: TFLHKYRLLLLSFYQEQDPPSLA*SLGSTR
Trigger: CCGTGTGCTGCCCAGGCTCCAAGCCAGGGAAGGGGG...GTCTTGCTCTTGATAGAAACTGAGAAGCAGCAATCTGTATTTGTGGAGGAAAGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AGGGCCATGATATGGTTATCATTACTATGTAATAAACCACCCCAAATGCAGTGGGGGGTGAAGGCCGTGTaGTGCTGGGAGCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RAMIWLSLLCNKPPQMQWGVKAV*CWEQPL
Trigger: CAGGGGCTGCTCCCAGCACCACACGGCCTTCACCCC...CCACTGCATTTGGGGTGGTTTATTACATAGTAATGATAACCATATCATGGCCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AGTAAATGTGCAGAGCTGTGCACCCATCACTCCAACCCAGTTTCCGGATACTTCCCCATCAAGCCAGGCTaGAGGGACGATCTACTTTCC +
Preference number: 4 (lower is better)
Translates to: SKCAELCTHHSNPVSGYFPIKPG*RDDLLS
Trigger: GGAAAGTAGATCGTCCCTCCAGCCTGGCTTGATGGG...GAAGTATCCGGAAACTGGGTTGGAGTGATGGGTGCACAGCTCTGCACATTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp AAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCACCCCAAATGCAGTaGCTTAAACAACTACTTATT +
Preference number: 4 (lower is better)
Translates to: KLHRRVTPEHLSETLRPFPPQMQ*LKQLLI
Trigger: AATAAGTAGTTGTTTAAGCCACTGCATTTGGGGTGG...GAAGGGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AGAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTACTACAATTCTACAGTaGTCTCCAGAGACCAGTTTA +
Preference number: 4 (lower is better)
Translates to: RAKLPLSAGRPHVTERLRTTILQ*SPETSL
Trigger: TAAACTGGTCTCTGGAGATCACTGTAGAATTGTAGT...ACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGTCTGTCTGGGAGAGCTaGGGCAAAGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRSVWES*GKAGDF
Trigger: GAAGTCTCCAGCTTTGCCTCAGCTCTCCCAGACAGA...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp TGCTTGTCTCTGTATTTTAAAAACACGCTCTCTTCACCTCCAGTGCTGAAAGCTTCCCAGCCGCTGCTCTaGCGTCCTCGTGGACGGTTT +
Preference number: 4 (lower is better)
Translates to: CLSLYFKNTLSSPPVLKASQPLL*RPRGRF
Trigger: AAACCGTCCACGAGGACGTCAGAGCAGCGGCTGGGA...AGCTTTCAGCACTGGAGGTGAAGAGAGCGTGTTTTTAAAATACAGAGACAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7
CDS-3UTR TCA 90 bp ATGCTCCCTTCTCCTGAAACAATGTTTTTGATAAACTTGCCCTTCTCCCTTGAACCTCGCATGGGGAAGTaGGGCAGCCCCAGACACGAG +
Preference number: 4 (lower is better)
Translates to: MLPSPETMFLINLPFSLEPRMGK*GSPRHE
Trigger: CTCGTGTCTGGGGCTGCCTCACTTCCCCATGCGAGG...TTCAAGGGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGGAGAAGGGAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGCAGCAGGTGACAGAGTaGCCATCACTAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRQQVTE*PSLAVR
Trigger: CCTCACTGCTAGTGATGGTCACTCTGTCACCTGCTG...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGGGGATGGCTGGGTCTTaGGGACGAGGAAGTACAGAA +
Preference number: 4 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRGMAGS*GRGSTE
Trigger: TTCTGTACTTCCTCGTCCTCAAGACCCAGCCATCCC...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp ACTTTCCTCCACAAATACAGATTGCTGCTTCTCAGTTTCTATCAAGAGCAAGACGATCTCCTGACCTCGTaGTCCGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TFLHKYRLLLLSFYQEQDDLLTS*SARLSL
Trigger: GAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATC...GTCTTGCTCTTGATAGAAACTGAGAAGCAGCAATCTGTATTTGTGGAGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTGGCCATGCCATCTTCTaGCAGTGGAGAGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VISRCCPGAKHFRQINNSGHAIF*QWRGQV
Trigger: GACCTGCCCTCTCCACTGTCAGAAGATGGCATGGCC...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GAGCAAAACTGCCCCTCTCGGCGGGACGGCCGCATGTTACAGAAAGGCTTCGTCAATCATATACTAAGTTaGTGGCACAGTGTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: EQNCPSRRDGRMLQKGFVNHILS*WHSVGK
Trigger: TTTTCCCACACTGTGCCATCAACTTAGTATATGATT...GACGAAGCCTTTCTGTAACATGCGGCCGTCCCGCCGAGAGGGGCAGTTTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GCCGATACTGATAGGTCAGCTCACGGAAGCTGCGCAGGCCACAGCAGTAACACATGTAAAGGGCATGTCTaGTTCTTAACAACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ADTDRSAHGSCAGHSSNTCKGHV*FLTTFS
Trigger: GCTGAAGGTTGTTAAGAAGCAGACATGCCCTTTACA...TGTGTTACTGCTGTGGCCTGCGCAGCTTCCGTGAGCTGACCTATCAGTATCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR GCA 90 bp AGAGCACCTGTCGGAGACCCTGCGTCCCTTCCCTCAGGGGGCTGTGAAAACACCTCTTGTGTCATGCCTTaGTTTTCACTTAAAGATTCA +
Preference number: 4 (lower is better)
Translates to: RAPVGDPASLPSGGCENTSCVMP*FSLKDS
Trigger: TGAATCTTTAAGTGAAAAGCAAGGCATGACACAAGA...GGTGTTTTCACAGCCCCCTGAGGGAAGGGACGCAGGGTCTCCGACAGGTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000450056.7
CDS-3UTR GCA 90 bp GGTAAAGCTCCACAGAAGAGTCACCCCAGAGCACCTGTCGGAGACCCTGCGTCCAGGATTCTTGTGTCATaGCTTGCTTTTCACTTAAAG +
Preference number: 4 (lower is better)
Translates to: GKAPQKSHPRAPVGDPASRILVS*LAFHLK
Trigger: CTTTAAGTGAAAAGCAAGGCATGACACAAGAATCCT...GGACGCAGGGTCTCCGACAGGTGCTCTGGGGTGACTCTTCTGTGGAGCTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000450056.7
CDS-3UTR GCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAATTTCTACGCGGTTGTaGGACCAACAACTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLISTRL*DQQLPV
Trigger: AACGGGCAGTTGTTGGTCGCACAACCGCGTAGAAAT...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTAGAGTTCACGGCCACCTaGTTCCATAAAACACAGCTC +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLEFTAT*FHKTQL
Trigger: GAGCTGTGTTTTATGGAAGCAGGTGGCCGTGAACTC...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GGGGGTCCCTGCTTTGGTCCAGTTTCATGTTTGTGTGTGGATACCTTCAGAGGGTGTTTTAAGCCAATCTaGCCAGACTTCCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GGPCFGPVSCLCVDTFRGCFKPI*PDFLAA
Trigger: TGCAGCCAGGAAGTCTGGGCAGATTGGCTTAAAACA...CCCTCTGAAGGTATCCACACACAAACATGAAACTGGACCAAAGCAGGGACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp AGCGAGAGGGGCTACCATCTGCATGGGGCCGTCATTCATATTTATCGTAGCCTATCAGTGATCAGTAGATaGTGCCCTGGGGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: SERGYHLHGAVIHIYRSLSVISR*CPGAKH
Trigger: ATGTTTGGCCCCAGGGCAGCATCTACTGATCACTGA...TAGGCTACGATAAATATGAATGACGGCCCCATGCAGATGGTAGCCCCTCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTGGCGGGTCTCACAAATaGATGCTCCCAGCACAGCGC +
Preference number: 4 (lower is better)
Translates to: VISRCCPGAKHFRQINNSGGSHK*MLPAQR
Trigger: GCGCTGTGCTGGGAGCATGCATTTGTGAGACCCGCC...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTGGCCCTTGCTCCCTCTaGAAAGCACATCCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VISRCCPGAKHFRQINNSGPCSL*KAHPSH
Trigger: GTGGGAGGGATGTGCTTTGCAGAGGGAGCAAGGGCC...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCATCAGGTCAGCAGTTAGAGCTGAGTGTCTGCCACAGAGACCTAGAGCTACAGCAGAAGGATCCTTCTTaGATTCACTCCCTATCCCCT +
Preference number: 4 (lower is better)
Translates to: PSGQQLELSVCHRDLELQQKDPS*IHSLSP
Trigger: AGGGGATAGGGAGTGAATGCAAGAAGGATCCTTCTG...CTGTAGCTCTAGGTCTCTGTGGCAGACACTCAGCTCTAACTGCTGACCTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGAGACCAGTTTATTGCTaGGGAAGGAAAGGTCGCAAC +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRRPVYC*GRKGRN
Trigger: GTTGCGACCTTTCCTTCCCCAGCAATAAACTGGTCT...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp TCCCGTGACTCTGTAATCAGACAGCAGAAACACTCCCCGCTGGAGAGCCACGAGTCCATGTCAAACCTCTaGTTGCCAGGTAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: SRDSVIRQQKHSPLESHESMSNL*LPGNSS
Trigger: TGAAGAATTACCTGGCAACCAGAGGTTTGACATGGA...CTCGTGGCTCTCCAGCGGGGAGTGTTTCTGCTGTCTGATTACAGAGTCACGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315585.11
ENST00000535527.5
CDS-3UTR CCA 90 bp CTTATGCTCCCTTCTCCTGAAACAATGTTTTTGATAAACTTGCCCTTCTCCCTTCCTGCCTCCCTCGCATaGGGAAGTGAGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LMLPSPETMFLINLPFSLPASLA*GSEAAP
Trigger: TGGGGCTGCCTCACTTCCCCATGCGAGGGAGGCAGG...AAGGGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGGAGAAGGGAGCATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp GGGCTGTTTGTGAGAATTAGCTGGTTCGGTGGAGAAGCAGAGGAACACCTGAGGCGTTCAGTAGCCAACTaGTCAGTGATCAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: GLFVRISWFGGEAEEHLRRSVAN*SVISRC
Trigger: GCATCTACTGATCACTGACCAGTTGGCTACTGAACG...CCTCAGGTGTTCCTCTGCTTCTCCACCGAACCAGCTAATTCTCACAAACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CAGAGTGTTACAATATGTTCAAGCCCTAAATCCCAGGACCTCAGAGGTGACTGTATTCAAGGCCAGCACTaGGCAGGGCGGGTCTCACAA +
Preference number: 4 (lower is better)
Translates to: QSVTICSSPKSQDLRGDCIQGQH*AGRVSQ
Trigger: TTGTGAGACCCGCCCTGCCCAGTGCTGGCCTTGAAT...ACAGTCACCTCTGAGGTCCTGGGATTTAGGGCTTGAACATATTGTAACACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CTTATGCTCCCTTCTCCTGAAACAATGTTTTTGATAAACTTGCCCTTCTCCCTTAGGGGCAGGCAGGGCTaGTTCCTTCTGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LMLPSPETMFLINLPFSLRGRQG*FLLVAL
Trigger: CAGGGCCACCAGAAGGAACCAGCCCTGCCTGCCCCT...AAGGGAGAAGGGCAAGTTTATCAAAAACATTGTTTCAGGAGAAGGGAGCATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR CCA 90 bp CCACAAGCTAATCCAGGATCCTCCCCTCATCTCAAGGTCCTTAATTCCACCATAAACGGGATGAGTGTGTaGGGGGTAGTGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PQANPGSSPHLKVLNSTINGMSV*GVVSFL
Trigger: CAGGAAGCTCACTACCCCCCACACACTCATCCCGTT...TATGGTGGAATTAAGGACCTTGAGATGAGGGGAGGATCCTGGATTAGCTTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp AGGGCCTCTGGATGCTTAGTTTTTGAACCTTGTCTGTTCACAGATATGATTGAATCCCAGCCGCTGCTCTaGCGTCCTCGTGGACGGTTT +
Preference number: 4 (lower is better)
Translates to: RASGCLVFEPCLFTDMIESQPLL*RPRGRF
Trigger: AAACCGTCCACGAGGACGTCAGAGCAGCGGCTGGGA...TTCAATCATATCTGTGAACAGACAAGGTTCAAAAACTAAGCATCCAGAGGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315585.11
CDS-3UTR TCA 90 bp ATTCCACCATATCTGCAAAGCCCCTTTTACGGTGCAAGGCAACATCATCACAGGGGAGGAGGGTTGGCCTaGATCCCTCAGTCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: IPPYLQSPFYGARQHHHRGGGLA*IPQSVL
Trigger: TAAAACAGACTGAGGGATTCAGGCCAACCCTCCTCC...CCTGTGATGATGTTGCCTTGCACCGTAAAAGGGGCTTTGCAGATATGGTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp CAGAGTGTTACAATATGTTCAAGCCCTAAATCCCAGGACCTCAGAGGTGACTGTCCAGGACCTCAGAGGTaGCTGTATCTGCAGACATGG +
Preference number: 4 (lower is better)
Translates to: QSVTICSSPKSQDLRGDCPGPQR*LYLQTW
Trigger: CCATGTCTGCAGATACAGTCACCTCTGAGGTCCTGG...ACAGTCACCTCTGAGGTCCTGGGATTTAGGGCTTGAACATATTGTAACACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp GTGATCAGTAGATGCTGCCCTGGGGCCAAACATTTCAGACAAATAAACAACAGTCAACCACAGCACCTCTaGGACAGACTGGACCCTTCC +
Preference number: 4 (lower is better)
Translates to: VISRCCPGAKHFRQINNSQPQHL*DRLDPS
Trigger: GGAAGGGTCCAGTCTGTCTCAGAGGTGCTGTGGTTG...ACTGTTGTTTATTTGTCTGAAATGTTTGGCCCCAGGGCAGCATCTACTGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR TCA 90 bp ACTTTCCTCCACAAATACAGATTGCTGCTTCTCAGTTTCTATCAAGAGCAAGACGAGCAGGGGAGAGGGTaGAGCGGATGTTGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: TFLHKYRLLLLSFYQEQDEQGRG*SGCWVL
Trigger: GAGCACCCAACATCCGCTTCACCCTCTCCCCTGCTC...GTCTTGCTCTTGATAGAAACTGAGAAGCAGCAATCTGTATTTGTGGAGGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CCAGACTTCCTGGCTGCAGTCAGAAGCTATGACAGAGGCCATCCCAGAGAGGCCAGGATTCTTGTGTCATaGCTTGCTTTTCACTTAAAG +
Preference number: 4 (lower is better)
Translates to: PDFLAAVRSYDRGHPREARILVS*LAFHLK
Trigger: CTTTAAGTGAAAAGCAAGGCATGACACAAGAATCCT...GGCCTCTCTGGGATGGCCTCTGTCATAGCTTCTGACTGCAGCCAGGAAGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp AGAATATGCAAAAGAGAGGACTTTCCTCCACAAATACAGATTGCTGCTTCTCAGTGGCTTCCCAGCCGCTaGTCTGACGTCCTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: RICKREDFPPQIQIAASQWLPSR*SDVLVD
Trigger: GTCCACGAGGACGTCAGAGCAGCGGCTGGGAAGCCA...CTGAGAAGCAGCAATCTGTATTTGTGGAGGAAAGTCCTCTCTTTTGCATATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266880.11
ENST00000443047.6
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAGTGTTACAATATGTTCAAGCCCTAAATCCCAGGACCTCAGAGGTGACTGTAAACTCACGCAGTCGTaGAGCAGGTCCTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: QSVTICSSPKSQDLRGDCKLTQS*SRSWQM
Trigger: CATCTGCCAGGACCTGCTGCACGACTGCGTGAGTTT...ACAGTCACCTCTGAGGTCCTGGGATTTAGGGCTTGAACATATTGTAACACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp CAGAGTGTTACAATATGTTCAAGCCCTAAATCCCAGGACCTCAGAGGTGACTGTCACGTAATCCTGGACTaGTGTCGTCAGGCTGACGGA +
Preference number: 4 (lower is better)
Translates to: QSVTICSSPKSQDLRGDCHVILD*CRQADG
Trigger: TCCGTCAGCCTGACGACAGCAGTCCAGGATTACGTG...ACAGTCACCTCTGAGGTCCTGGGATTTAGGGCTTGAACATATTGTAACACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266880.11
ENST00000450056.7
CDS-3UTR GCA 90 bp TGCTTGTCTCTGTATTTTAAAAACACGCTCTCTTCACCTCCAGTGCTGAAAGCTGCTGGAAGCAGCAGGTaGACAGGGCGTGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CLSLYFKNTLSSPPVLKAAGSSR*TGRGFL
Trigger: AAGGAAGCCACGCCCTGTGCACCTGCTGCTTCCAGC...AGCTTTCAGCACTGGAGGTGAAGAGAGCGTGTTTTTAAAATACAGAGACAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266880.11
ENST00000315585.11
ENST00000432561.6
ENST00000443047.6
ENST00000450056.7