RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHERP (Homo sapiens)

Ensembl gene IDs: ENSG00000085872

Ensembl transcript IDs: ENST00000198939.6, ENST00000544299.5, ENST00000546361.7, ENST00000546538.1, ENST00000551747.1, ENST00000597261.1, ENST00000600432.1

Found 630 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGTGGCTGCAGCGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTaGCCTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCT +
Preference number: 1 (lower is better)
Translates to: LVAAAPPGVVCGWHP*PPRHGARRSHWACA
Trigger: AGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCGCTGCAGCCACCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 90 bp AGGAAAACGAGCCTGGGGCCCTGGTGGCTGCAGCGCCTCCTGGTGTaGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGC +
Preference number: 1 (lower is better)
Translates to: RKTSLGPWWLQRLLV*FVGGTRALHAMEHG
Trigger: GCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCGCTGCAGCCACCAGGGCCCCAGGCTCGTTTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 90 bp GTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTaGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCA +
Preference number: 1 (lower is better)
Translates to: VEGAGWGRAPCSGWD*AVAHASRCRVLPSA
Trigger: TGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 90 bp GATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATaGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCA +
Preference number: 1 (lower is better)
Translates to: DGVEGAGWGRAPCSG*DWAVAHASRCRVLP
Trigger: TGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR GCA 90 bp GGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTaGAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCA +
Preference number: 1 (lower is better)
Translates to: GLGRRTRQPVQGSSK*KTQAGDATGTDSEA
Trigger: TGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 90 bp GGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTTCCCACTaGGCATGCGCTGGTCTTCCTTCTCTTCCTGTGGCTCTCCACAAG +
Preference number: 1 (lower is better)
Translates to: GWHPCPPRHGARRSH*ACAGLPSLPVALHK
Trigger: CTTGTGGAGAGCCACAGGAAGAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 90 bp GCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATaGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCT +
Preference number: 1 (lower is better)
Translates to: ASWCGLWVAPVPSTP*STAFPLGMRWSSFS
Trigger: AGAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR GCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTaGAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGG +
Preference number: 1 (lower is better)
Translates to: APCSGWDWAVAHASR*RVLPSAKLKQGTRR
Trigger: CCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR GCA 90 bp CACCCGTGCCCTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATaGGCTGGTCTTCCTTCTCTTCCTGTGGCTCTCCACAAGTGGAGA +
Preference number: 1 (lower is better)
Translates to: HPCPPRHGARRSHWA*AGLPSLPVALHKWR
Trigger: TCTCCACTTGTGGAGAGCCACAGGAAGAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCACGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 90 bp GTGCCCTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTaGTCTTCCTTCTCTTCCTGTGGCTCTCCACAAGTGGAGACGGTG +
Preference number: 1 (lower is better)
Translates to: VPSTPWSTAFPLGMR*SSFSSCGSPQVETV
Trigger: CACCGTCTCCACTTGTGGAGAGCCACAGGAAGAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR TCA 90 bp AAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTaGAGTGTCTTAGGCTGGTTTCCTGTTAGAATCTTGTTTCCCAGA +
Preference number: 1 (lower is better)
Translates to: KQGTRRAQTPRQRST*SVLGWFPVRILFPR
Trigger: TCTGGGAAACAAGATTCTAACAGGAAACCAGCCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR TCA 90 bp CCTTCTCTTCCTGTGGCTCTCCACAAGTGGAGACGGTGTAAGAACTaGGCTGTCACTGCAATCTTCCTCTGCCAGTCAGCCAGGAAGGTC +
Preference number: 1 (lower is better)
Translates to: PSLPVALHKWRRCKN*AVTAIFLCQSARKV
Trigger: GACCTTCCTGGCTGACTGGCAGAGGAAGATTGCAGTGACAGCTCAGTTCTTACACCGTCTCCACTTGTGGAGAGCCACAGGAAGAGAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 90 bp AAAAATGTTTCTGTACAAATGAATGGAATTGCACCAGGCTGCCCATaGACACCAGGTGTGGCCGATTCCCAACGGTCACCCACCAGCTTC +
Preference number: 1 (lower is better)
Translates to: KNVSVQMNGIAPGCP*TPGVADSQRSPTSF
Trigger: GAAGCTGGTGGGTGACCGTTGGGAATCGGCCACACCTGGTGTCCATGGGCAGCCTGGTGCAATTCCATTCATTTGTACAGAAACATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR GCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCTGTGGGTGGCACCCGTaGCCTCCACGCCATGGAGCA +
Preference number: 2 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRCGWHP*PPRHGA
Trigger: TGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACA...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCGTGCCCTCCACGCCATaGAGCACGGCGTTCCCACTG +
Preference number: 2 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRVPSTP*STAFPL
Trigger: CAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCAC...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCTGGGGTGCCGGCTCTaGCTCAGGCCAACCCTTCCT +
Preference number: 2 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRLGCRL*LRPTLP
Trigger: AGGAAGGGTTGGCCTGAGCCAGAGCCGGCACCCCAG...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR GCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTTGTGGGTGGCACCCGTaGCCTCCACGCCATGGAGCA +
Preference number: 2 (lower is better)
Translates to: APCSGWDWAVAHASRCRVCGWHP*PPRHGA
Trigger: TGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACA...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACGGCTGCAGCGCCTCCTaGTGTGGTTTGTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: KALAGVGLHALDGTGPSHGCSAS*CGLWVA
Trigger: TGCCACCCACAAACCACACCAGGAGGCGCTGCAGCC...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCAGCGCCTCCTGGTGTaGTTTGTGGGTGGCACCCGT +
Preference number: 2 (lower is better)
Translates to: APCSGWDWAVAHASRCRVQRLLV*FVGGTR
Trigger: ACGGGTGCCACCCACAAACCACACCAGGAGGCGCTG...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAGTGCCCTCCACGCCATaGAGCACGGCGTTCCCACTG +
Preference number: 2 (lower is better)
Translates to: RGQSWHWASALSLHSRGEVPSTP*STAFPL
Trigger: CAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCAC...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTTCCTGGTGTGGTTTGTaGGTGGCACCCGTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: QAGDATGTDSEAALNLKCSWCGL*VAPVPS
Trigger: GGAGGGCACGGGTGCCACCCACAAACCACACCAGGA...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR TCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCGAGGAGGCTTCAATCTaGCTTAGGGCAGATGCACAT +
Preference number: 2 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTREEASI*LRADAH
Trigger: ATGTGCATCTGCCCTAAGTCAGATTGAAGCCTCCTC...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR GCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTCAGGCCAACCCTTCCTaGACATGCTCCTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSQANPS*TCSSWS
Trigger: GCTCCAGGAGGAGCATGTGCAGGAAGGGTTGGCCTG...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTCCACTGGGCATGCGCTaGTCTTCCTTCTCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRPLGMR*SSFSSC
Trigger: ACAGGAAGAGAAGGAAGACCAGCGCATGCCCAGTGG...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGGCACGGCGTTCCCACTaGGCATGCGCTGGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: KTQAGDATGTDSEAALNLARRSH*ACAGLP
Trigger: AGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGC...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGCACGGCGTTCCCACTaGGCATGCGCTGGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPARRSH*ACAGLP
Trigger: AGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGC...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGTGTGGTTTGTGGGTaGCACCCGTGCCCTCCACGC +
Preference number: 2 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRGVVCG*HPCPPR
Trigger: GCGTGGAGGGCACGGGTGCCACCCACAAACCACACC...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGTCCTGGTGTGGTTTGTaGGTGGCACCCGTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATSWCGL*VAPVPS
Trigger: GGAGGGCACGGGTGCCACCCACAAACCACACCAGGA...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTCAGCGCCTCCTGGTGTaGTTTGTGGGTGGCACCCGT +
Preference number: 2 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPQRLLV*FVGGTR
Trigger: ACGGGTGCCACCCACAAACCACACCAGGAGGCGCTG...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTATCCGCGGGCAGTCATaGCACTGGGCTTCGGCTTTG +
Preference number: 2 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSIRGQS*HWASAL
Trigger: CAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGAT...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR GCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAAACCCTTCCTGCACATaGTCCTCCTGGAGCCTAGGA +
Preference number: 2 (lower is better)
Translates to: RGQSWHWASALSLHSRGENPSCT*SSWSLG
Trigger: TCCTAGGCTCCAGGAGGAGCATGTGCAGGAAGGGTT...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTTTCCTTCTCTTCCTGTaGCTCTCCACAAGTGGAGAC +
Preference number: 2 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRFLLFL*LSTSGD
Trigger: GTCTCCACTTGTGGAGAGCCACAGGAAGAGAAGGAA...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGTGTGGTTTGTGGGTaGCACCCGTGCCCTCCACGC +
Preference number: 2 (lower is better)
Translates to: NEMMEWKALAGVGLHALDGVVCG*HPCPPR
Trigger: GCGTGGAGGGCACGGGTGCCACCCACAAACCACACC...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCTGCAGCGCCTCCTaGTGTGGTTTGTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRGCSAS*CGLWVA
Trigger: TGCCACCCACAAACCACACCAGGAGGCGCTGCAGCC...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATCTGGGGTGCCGGCTCTaGCTCAGGCCAACCCTTCCT +
Preference number: 2 (lower is better)
Translates to: NEMMEWKALAGVGLHALDLGCRL*LRPTLP
Trigger: AGGAAGGGTTGGCCTGAGCCAGAGCCGGCACCCCAG...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCAGGTCAGGGCCGGTaGGTGCGGGGAGCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVPGQGR*VRGAGG
Trigger: TCCTCCAGCTCCCCGCACCCACCGGCCCTGACCTGG...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR TCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGGAGGAGGCTTCAATCTaGCTTAGGGCAGATGCACAT +
Preference number: 2 (lower is better)
Translates to: GDATGTDSEAALNLKCLREEASI*LRADAH
Trigger: ATGTGCATCTGCCCTAAGTCAGATTGAAGCCTCCTC...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR GCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGGAACTGAGCTGTCACTaGAATCTTCCTCTGCCAGTC +
Preference number: 2 (lower is better)
Translates to: GDATGTDSEAALNLKCLRELSCH*NLPLPV
Trigger: GACTGGCAGAGGAAGATTGCAGTGACAGCTCAGTTC...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGGTTTCAGAATCTCACTaGGCCTCCTCTCAGGTCAGT +
Preference number: 2 (lower is better)
Translates to: GDATGTDSEAALNLKCLRVSESH*ASSQVS
Trigger: ACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAAC...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTTTCCTTCTCTTCCTGTaGCTCTCCACAAGTGGAGAC +
Preference number: 2 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPFLLFL*LSTSGD
Trigger: GTCTCCACTTGTGGAGAGCCACAGGAAGAGAAGGAA...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTACATCCATCCCTTCGTaGCTGAAGAATTTACTCGGG +
Preference number: 2 (lower is better)
Translates to: QAGDATGTDSEAALNLKCTSIPS*LKNLLG
Trigger: CCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGT...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGCAGTCATGGCACTaGGCTTCGGCTTTGTCCCTA +
Preference number: 2 (lower is better)
Translates to: NEMMEWKALAGVGLHALDGQSWH*ASALSL
Trigger: TAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCC...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR TCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATAGACGGTGTAAGAACTaGGCTGTCACTGCAATCTTC +
Preference number: 2 (lower is better)
Translates to: NEMMEWKALAGVGLHALDRRCKN*AVTAIF
Trigger: GAAGATTGCAGTGACAGCTCAGTTCTTACACCGTCT...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR GCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGAACTGAGCTGTCACTaGAATCTTCCTCTGCCAGTC +
Preference number: 2 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTELSCH*NLPLPV
Trigger: GACTGGCAGAGGAAGATTGCAGTGACAGCTCAGTTC...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTGCTGGAGGAAGGAGCTaGGGTGCCGGCTCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: FEELGFRISLGLLSGQYSAGGRS*GAGSGS
Trigger: TGAGCCAGAGCCGGCACCCCAGCTCCTTCCTCCAGC...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTAAAGGAAAACGAGCCTaGGGCCCTGGTGGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: FEELGFRISLGLLSGQYSKGKRA*GPGGCS
Trigger: GCTGCAGCCACCAGGGCCCCAGGCTCGTTTTCCTTT...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGCCAGGTCAGGGCCGGTaGGTGCGGGGAGCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: ISTYTTKITELRASTPSKPGQGR*VRGAGG
Trigger: TCCTCCAGCTCCCCGCACCCACCGGCCCTGACCTGG...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR TCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTACCATCCCTTCGTGGCTaGAGAATTTACTCGGGCGGA +
Preference number: 2 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLPSLRG*RIYSGG
Trigger: TCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGG...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR TCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGAGACGGTGTAAGAACTaGGCTGTCACTGCAATCTTC +
Preference number: 2 (lower is better)
Translates to: ISTYTTKITELRASTPSKRRCKN*AVTAIF
Trigger: GAAGATTGCAGTGACAGCTCAGTTCTTACACCGTCT...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 72 bp AGCCTGGGGCCCTGGTGGCTGCAGCGCCTCCTGGTGTaGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATG +
Preference number: 3 (lower is better)
Translates to: SLGPWWLQRLLV*FVGGTRALHAM
Trigger: CATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCGCTGCAGCCACCAGGGCCCCAGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 72 bp AGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTaGATGGGACTGGGCCGTCGCACACGCCAGCCGGTG +
Preference number: 3 (lower is better)
Translates to: SGRRWLGSGSML*MGLGRRTRQPV
Trigger: CACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CAA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACGCCTCCTGGTGTGGTTaGTGGGTGGCACCCGTGCCC +
Preference number: 3 (lower is better)
Translates to: KALAGVGLHALDGTGPSHASWCG*WVAPVP
Trigger: GGGCACGGGTGCCACCCACAAACCACACCAGGAGGC...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR GCA 72 bp GCAGCGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTaGCCTCCACGCCATGGAGCACGGCGTTCCCACTGG +
Preference number: 3 (lower is better)
Translates to: AAPPGVVCGWHP*PPRHGARRSHW
Trigger: CCAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR GCA 72 bp GATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATaGTCTGGATGGGACTGGGCCGTCGCACACGCCAGC +
Preference number: 3 (lower is better)
Translates to: DGVEGAGWGRAP*SGWDWAVAHAS
Trigger: GCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 72 bp GCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTaGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTT +
Preference number: 3 (lower is better)
Translates to: AGWGRAPCSGWD*AVAHASRCRVL
Trigger: AAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CAA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCCTCCTGGTGTGGTTaGTGGGTGGCACCCGTGCCC +
Preference number: 3 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSASWCG*WVAPVP
Trigger: GGGCACGGGTGCCACCCACAAACCACACCAGGAGGC...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR GCA 72 bp GCTGGGGTGCCGGCTCTGGCTCAGGCCAACCCTTCCTaGACATGCTCCTCCTGGAGCCTAGGAGGAGGCTTC +
Preference number: 3 (lower is better)
Translates to: AGVPALAQANPS*TCSSWSLGGGF
Trigger: GAAGCCTCCTCCTAGGCTCCAGGAGGAGCATGTGCAGGAAGGGTTGGCCTGAGCCAGAGCCGGCACCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 72 bp TGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATaGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: CGLWVAPVPSTP*STAFPLGMRWS
Trigger: AGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 72 bp CCGTGCCCTCCACGCCATGGAGCACGGCGTTCCCACTaGGCATGCGCTGGTCTTCCTTCTCTTCCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: PCPPRHGARRSH*ACAGLPSLPVA
Trigger: AGCCACAGGAAGAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CAA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTCACTGGGCTTCGGCTTaGTCCCTACACAGCCGAGGG +
Preference number: 3 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSHWASA*SLHSRG
Trigger: CCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTG...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR GCA 72 bp CGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTaGAAAACTCAAGCAGGGGACGCGACGGGCACAGAC +
Preference number: 3 (lower is better)
Translates to: RRTRQPVQGSSK*KTQAGDATGTD
Trigger: GTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR GCA 72 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTaGAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGG +
Preference number: 3 (lower is better)
Translates to: SGWDWAVAHASR*RVLPSAKLKQG
Trigger: CCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR TCA 72 bp CCTGTGGCTCTCCACAAGTGGAGACGGTGTAAGAACTaGGCTGTCACTGCAATCTTCCTCTGCCAGTCAGCC +
Preference number: 3 (lower is better)
Translates to: PVALHKWRRCKN*AVTAIFLCQSA
Trigger: GGCTGACTGGCAGAGGAAGATTGCAGTGACAGCTCAGTTCTTACACCGTCTCCACTTGTGGAGAGCCACAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR TCA 72 bp ACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTaGAGTGTCTTAGGCTGGTTTCCTGTTAGAATCTTG +
Preference number: 3 (lower is better)
Translates to: TRRAQTPRQRST*SVLGWFPVRIL
Trigger: CAAGATTCTAACAGGAAACCAGCCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 72 bp TGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTaGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAA +
Preference number: 3 (lower is better)
Translates to: CFCFSIRGQSWH*ASALSLHSRGE
Trigger: TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CAA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTAGGGTCTTGTGTTTTTaGCTTCGCTATAAAGGAAAA +
Preference number: 3 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSRVLCF*LRYKGK
Trigger: TTTTCCTTTATAGCGAAGCAAAAAACACAAGACCCT...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR-3UTR CAA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAAGGGTCTTGTGTTTTTaGCTTCGCTATAAAGGAAAA +
Preference number: 3 (lower is better)
Translates to: RGQSWHWASALSLHSRGERVLCF*LRYKGK
Trigger: TTTTCCTTTATAGCGAAGCAAAAAACACAAGACCCT...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR CCA 72 bp GTTTTGTGTTTCTGTTTTTCAATCCGCGGGCAGTCATaGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGA +
Preference number: 3 (lower is better)
Translates to: VLCFCFSIRGQS*HWASALSLHSR
Trigger: TCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACACAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
3UTR GCA 72 bp AATGTTTCTGTACAAATGAATGGAATTGCACCAGGCTaGCCATGGACACCAGGTGTGGCCGATTCCCAACGG +
Preference number: 3 (lower is better)
Translates to: NVSVQMNGIAPG*PWTPGVADSQR
Trigger: CCGTTGGGAATCGGCCACACCTGGTGTCCATGGGCAGCCTGGTGCAATTCCATTCATTTGTACAGAAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGGGCGCGTCGCGCTaGCCGTTCCAGCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRQGASR*PFQPGS
Trigger: TGACCCCGGCTGGAACGGCCAGCGCGACGCGCCCTG...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACCTGCATGCGGAAGGGTaGCTCGCGCTGGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHLHAEG*LALAPA
Trigger: GGCGGGGGCCAGCGCGAGCCACCCTTCCGCATGCAG...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCGAGCAGCTCCCCTCCTaGCCTCCCCTCCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTREQLPS*PPLPSG
Trigger: CCCCGAAGGGAGGGGAGGCCAGGAGGGGAGCTGCTC...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCCGGGGGCCGGCAGCTaGAGGATCCTGGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVPGAGS*RILDPS
Trigger: GGAGGGGTCCAGGATCCTGCAGCTGCCGGCCCCCGG...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCGTAGGGTGGCTGCTCTaGCGGCTGCTGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRVGWLL*RLLLAP
Trigger: TGGGGCCAGCAGCAGCCGCCAGAGCAGCCACCCTAC...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCGCTGGGCCAGGCTGGTaGCAAACTCCTCGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRAGPGW*QTPRAA
Trigger: CGCAGCACGAGGAGTTTGTCACCAGCCTGGCCCAGC...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCCGCTCGAAGGGGTaGCGTGGCGGGAAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHGRSKG*RGGKSS
Trigger: GGACGACTTCCCGCCACGGCACCCCTTCGAGCGGCC...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACGTAGGGTGGCTGCTCTaGCGGCTGCTGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHVGWLL*RLLLAP
Trigger: TGGGGCCAGCAGCAGCCGCCAGAGCAGCCACCCTAC...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGGCTGCTCGTGCTaGCTGTTCCAGGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHGGCSC*LFQGPS
Trigger: CGAGGGCCCCTGGAACAGCCAGCACGAGCAGCCGCC...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTGACCGGGACCGCGACTaGGACCGGGAGCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRDRDRD*DRERLL
Trigger: CAGAAGCCGCTCCCGGTCCCAGTCGCGGTCCCGGTC...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACCAGAGGAAGGCGGGGTaGGGCTCCTGGACCGTGACC +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHQRKAG*GSWTVT
Trigger: GGTCACGGTCCAGGAGCCCCACCCCGCCTTCCTCTG...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTGAGCAGCTCCCCTCCTaGCCTCCCCTCCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARREQLPS*PPLPSG
Trigger: CCCCGAAGGGAGGGGAGGCCAGGAGGGGAGCTGCTC...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTGTGCCCCATCAGCCGTaGTGCGGTTCCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRVPHQP*CGSGGG
Trigger: GCCACCTCCGGAACCGCATCACGGCTGATGGGGCAC...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCTGCTGCTGCTGCTGCTaGTGGGCCAGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRCCCCC*WARLVT
Trigger: TGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCA...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACTTGAACTGCGGGTGCTaGTGGTGGGGCGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHLNCGC*WWGGKG
Trigger: GCCCTTCCCGCCCCACCAGCAGCACCCGCAGTTCAA...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCTGGTTGAACTGCGGGTaGTGCTGGTGGGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRWLNCG*CWWGGK
Trigger: CTTCCCGCCCCACCAGCAGCACCCGCAGTTCAACCA...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTTGCTGCTCCACCGCGTaGGCCACGGCCGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVCCSTA*ATAAVT
Trigger: AGTGACAGCGGCCGTGGCCCACGCGGTGGAGCAGCA...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCGCCAGCTGCACCGGCTaGACCACTGAGGAGTACTCG +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRASCTG*TTEEYS
Trigger: CGAGTACTCCTCAGTGGTCCAGCCGGTGCAGCTGGC...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCGTGGTTGATGTGGGGTaGGCCCTGTCGCCGCATGTG +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRVVDVG*ALSPHV
Trigger: CACATGCGGCGACAGGGCCCACCCCACATCAACCAC...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACTGCTTGCGCTGGCTGTaGGGGAGAGACTTTCCGCGC +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHCLRWL*GRDFPR
Trigger: GCGCGGAAAGTCTCTCCCTCACAGCCAGCGCAAGCA...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000198939.6
CDS-3UTR TCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGTGCGGAGGCTGGTTaGACTGCGGGTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHGAEAG*TAGAAG
Trigger: ACCAGCAGCACCCGCAGTTCAACCAGCCTCCGCACC...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGCCGGGGGCCGGCAGCTaGAGGATCCTGGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLPGAGS*RILDPS
Trigger: GGAGGGGTCCAGGATCCTGCAGCTGCCGGCCCCCGG...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTCAGGGCGGCTGCTCGTaGTGGCTGTTCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSQGGCS*WLFQGP
Trigger: GGGCCCCTGGAACAGCCAGCACGAGCAGCCGCCCTG...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTAAGTGTGGGGGCCGCTaGATGCGGAAGGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVKCGGR*MRKGGS
Trigger: CGAGCCACCCTTCCGCATGCAGCGGCCCCCACACTT...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGGGCCGCTCGAAGGGGTaGCGTGGCGGGAAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRGRSKG*RGGKSS
Trigger: GGACGACTTCCCGCCACGGCACCCCTTCGAGCGGCC...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAGCGGCATCTCCATaGCTCCGGCCGCGGGGAACG +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSAAASP*LRPRGT
Trigger: CGTTCCCCGCGGCCGGAGCCATGGAGATGCCGCTGC...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGGCAGCGGCATCTCCATaGCTCCGGCCGCGGGGAACG +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRAAASP*LRPRGT
Trigger: CGTTCCCCGCGGCCGGAGCCATGGAGATGCCGCTGC...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAGCAGGGGTGGCATGGTaGCGGCTGGCTCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGEAGVAW*RLAPAP
Trigger: CGGAGCTGGAGCCAGCCGCCACCATGCCACCCCTGC...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGAGCTCGTCCATGGATaGCGCGCCCTGGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRELVHG*RALGRR
Trigger: CCGCCGGCCCAGGGCGCGCCATCCATGGACGAGCTC...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCTCTGGCGGCTGCTGCTaGCCCCAAGGAGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLSGGCC*PQGATG
Trigger: CCCCGTGGCTCCTTGGGGCCAGCAGCAGCCGCCAGA...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTTCTGGCGGCTGCTGCTaGCCCCAAGGAGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: QAGDATGTDSEAALNLKCSGGCC*PQGATG
Trigger: CCCCGTGGCTCCTTGGGGCCAGCAGCAGCCGCCAGA...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCGGCGGCTGCTCGTGCTaGCTGTTCCAGGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLGGCSC*LFQGPS
Trigger: CGAGGGCCCCTGGAACAGCCAGCACGAGCAGCCGCC...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTGGGGTGCCGGCTCTaGCTCAGGCCAACCCTTCCT +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVLGCRL*LRPTLP
Trigger: AGGAAGGGTTGGCCTGAGCCAGAGCCGGCACCCCAG...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTCCAGGTCAGGGCCGGTaGGTGCGGGGAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSPGQGR*VRGAGG
Trigger: TCCTCCAGCTCCCCGCACCCACCGGCCCTGACCTGG...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTTGGAGTGGAAGGCGCTaGCTGGGGTCGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVWSGRR*LGSGSM
Trigger: CATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCA...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGTGCCCCATCAGCCGTaGTGCGGTTCCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSVPHQP*CGSGGG
Trigger: GCCACCTCCGGAACCGCATCACGGCTGATGGGGCAC...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAAGGGTGGCCTGGTACTaGCCAAGCCCCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGERVAWY*PSPRAG
Trigger: CCCAGCCCTGGGGCTTGGTCAGTACCAGGCCACCCT...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCAGGGTGGCCTGGTACTaGCCAAGCCCCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLRVAWY*PSPRAG
Trigger: CCCAGCCCTGGGGCTTGGTCAGTACCAGGCCACCCT...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTGTGGAGGCGTGGCCTTaGCTTCAGCCTCCATCTGCG +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRVEAWP*LQPPSA
Trigger: CGCAGATGGAGGCTGAAGTCAAGGCCACGCCTCCAC...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACAAGGCGGGTGCTCGTTaGTGCCAGGATGAGGCATGC +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHKAGAR*CQDEAC
Trigger: GCATGCCTCATCCTGGCATCAACGAGCACCCGCCTT...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGCGCACCGAGGCCGCCTaGGCCGCTCCAGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRRTEAA*AAPAHL
Trigger: AAGATGGGCTGGAGCGGCTCAGGCGGCCTCGGTGCG...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCAAGTGCTGCTCCTGCTaGTGGAGGTTCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRKCCSC*WRFHWL
Trigger: GAGCCAGTGGAACCTCCAGCAGCAGGAGCAGCACTT...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTACGGCCGCTGTCACTTaGTCCTGTCTGAGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRTAAVT*SCLSAS
Trigger: GCTGGCGCTCAGACAGGAGCAAGTGACAGCGGCCGT...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACAGCTTCTGCATCTGCTaGTCCACCGCGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHSFCIC*STAWAT
Trigger: CGTGGCCCACGCGGTGGAGCAGCAGATGCAGAAGCT...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCTCCCGGGCCTGCTTaGGCTGGCTGTGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSAPGPA*AGCEGE
Trigger: CTCTCCCTCACAGCCAGCGCAAGCAGGCCCGGGAGC...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000198939.6
CDS-3UTR GCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTTGCTGCTGCTGCTGCTaGTGGGCCAGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRCCCCC*WARLVT
Trigger: TGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCA...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCACTTCAGCCTCCATCTaGGGCATCTGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRTSASI*GIWSCC
Trigger: GCAGCAGCTCCAGATGCCGCAGATGGAGGCTGAAGT...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACGCTGCTCGCCCCACATaGCCTCATGGCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHAARPT*PHGCCS
Trigger: GGAACAACAGCCATGAGGGCATGTGGGGCGAGCAGC...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTCCGGGGTCACCGCGCTaGTCGCCCCACATGCCCTCA +
Preference number: 4 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPPGSPR*SPHMPS
Trigger: TGAGGGCATGTGGGGCGAGCAGCGCGGTGACCCCGG...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGCCGCCCCAGGGCGGCTaGTCGTGCTGGCTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATPPQGG*SCWLFQ
Trigger: CTGGAACAGCCAGCACGAGCAGCCGCCCTGGGGCGG...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCTCCCGGGCCTGCTTaGGCTGGCAGTGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSAPGPA*AGSGAA
Trigger: TGCTGCACCACTGCCAGCGCAAGCAGGCCCGGGAGC...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546361.7
CDS-3UTR CCA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTTGGCATGGTGGCGGCTaGCTCCAGCTCCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QAGDATGTDSEAALNLKCWHGGG*LQLRGL
Trigger: CAGACCCCGGAGCTGGAGCCAGCCGCCACCATGCCA...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGCAGCTGCAGGATCCTaGACCCCTCCTGGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHAAAGS*TPPGAS
Trigger: CGAAGCTCCAGGAGGGGTCCAGGATCCTGCAGCTGC...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAACTGCGGGTGCTGCTaGTGGGGCGGGAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLNCGCC*WGGKGP
Trigger: GGGGCCCTTCCCGCCCCACCAGCAGCACCCGCAGTT...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACCTCGAAGGGGTGCCGTaGCGGGAAGTCGTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHLEGVP*REVVLH
Trigger: ATGCAGGACGACTTCCCGCCACGGCACCCCTTCGAG...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTCCGAAGTCAGGGTGCTaGGGTCCAGCCCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSPKSGC*GPAQGG
Trigger: CCCGCCTTGGGCTGGACCCCAGCACCCTGACTTCGG...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTAGCCTTCACTGTTCCTaGGCCTGTCGTGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRSLHCS*ACRGTG
Trigger: CCCCGTCCCACGACAGGCCCAGGAACAGTGAAGGCT...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCACCGGGAGCGGCTTCTaGAGGAGCGCGACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLTGSGF*RSATCS
Trigger: GGAGCAGGTCGCGCTCCTCCAGAAGCCGCTCCCGGT...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTACTGGCTCTGCTGGATaGGCTCGTCCATGGATGGCG +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVTGSAG*ARPWMA
Trigger: CGCCATCCATGGACGAGCTCATCCAGCAGAGCCAGT...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACTCCAGCTCCGGGGTCTaGTGCTTGCAGATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHSSSGV*CLQMSC
Trigger: GCAGCTCATCTGCAAGCAGCAGACCCCGGAGCTGGA...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACAAGTGCTGCTCCTGCTaGTGGAGGTTCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHKCCSC*WRFHWL
Trigger: GAGCCAGTGGAACCTCCAGCAGCAGGAGCAGCACTT...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACAGGGTCTGGATCTGCTaGTGGAAGGCCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHRVWIC*WKASCT
Trigger: GGTGCAGCTGGCCTTCCAGCAGCAGATCCAGACCCT...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGTGCTCTGGCGGCTGCTaGTGGCCCCAAGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATCSGGC*WPQGAT
Trigger: CGTGGCTCCTTGGGGCCAGCAGCAGCCGCCAGAGCA...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGCTGCTCGCCCCACATaGCCTCATGGCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHAARPT*PHGCCS
Trigger: GGAACAACAGCCATGAGGGCATGTGGGGCGAGCAGC...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGCAGGGCGGCTGCTCGTaGTGGCTGTTCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRQGGCS*WLFQGP
Trigger: GGGCCCCTGGAACAGCCAGCACGAGCAGCCGCCCTG...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGTGGGGGCCGCTGCATaGGGAAGGGTGGCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRVGAAA*GRVARA
Trigger: AGCGCGAGCCACCCTTCCGCATGCAGCGGCCCCCAC...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAAAGTGTGGGGGCCGCTaGATGCGGAAGGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGEKCGGR*MRKGGS
Trigger: CGAGCCACCCTTCCGCATGCAGCGGCCCCCACACTT...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGCACACGCCAGCCGGTaGAGGGTTCTTCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHAHASR*RVLPSA
Trigger: TGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGC...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAGCAGCTCCCGGGCCTaGTTGCGCTGGCAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLSSSRA*LRWQWC
Trigger: GCACCACTGCCAGCGCAAGCAGGCCCGGGAGCTGCT...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCTTGCGAGCCACGAACTaGGCGAGCTTGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRLRATN*ASLSMT
Trigger: TGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAA...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGTGGCAGGGGTGGCATaGTGGCGGCTGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATVAGVA*WRLAPA
Trigger: AGCTGGAGCCAGCCGCCACCATGCCACCCCTGCCAC...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACTGCTGGAGGTTCCACTaGCTCTGCTGGATGAGCTCG +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHCWRFH*LCWMSS
Trigger: CGAGCTCATCCAGCAGAGCCAGTGGAACCTCCAGCA...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTTGCTGCTGCTGCTGCTaGGCCAGGCTGGTGACAAAC +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRCCCCC*ARLVTN
Trigger: GTTTGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCA...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAGGGTGGAGCAGGCGGTaGAGGCGTGGCCTTGACTTC +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGEGWSRR*RRGLDF
Trigger: GAAGTCAAGGCCACGCCTCCACCGCCTGCTCCACCC...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCGGGTGGAGCAGGCGGTaGAGGCGTGGCCTTGACTTC +
Preference number: 4 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLGWSRR*RRGLDF
Trigger: GAAGTCAAGGCCACGCCTCCACCGCCTGCTCCACCC...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTTTGCTGTCATCAGGCTaGGTGGTGGGCGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVLLSSG*VVGGMA
Trigger: TGCCATCCCGCCCACCACCCAGCCTGATGACAGCAA...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACAGGGGGCTTGTTTGGTaGGATCTGGTCGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHRGLVW*DLVVWP
Trigger: GGGCCACACGACCAGATCCCACCAAACAAGCCCCCT...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGTGGTGCGGGTAGGGTaGCTGCTCTGGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRVVRVG*LLWRLL
Trigger: CAGCAGCCGCCAGAGCAGCCACCCTACCCGCACCAC...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGCAGGCGGCGTCGGGCTaGTTGTTCCAGGGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRQAASG*LFQGAS
Trigger: CGACGCGCCCTGGAACAACCAGCCCGACGCCGCCTG...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTTGGGGGTGCGGAGGCTaGTTGAACTGCGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QAGDATGTDSEAALNLKCWGCGG*LNCGCC
Trigger: GCAGCACCCGCAGTTCAACCAGCCTCCGCACCCCCA...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGCCGAAGTCAGGGTGCTaGGGTCCAGCCCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRPKSGC*GPAQGG
Trigger: CCCGCCTTGGGCTGGACCCCAGCACCCTGACTTCGG...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCCTGTCGCCGCATGTGTaGGGGCTGCCCGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLLSPHV*GLPVEA
Trigger: GGCTTCAACGGGCAGCCCCCACACATGCGGCGACAG...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTCCGGCGTCTTCTTCCTaGGGAGTACGACTTGGACCG +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRPASSS*GVRLGP
Trigger: CGGTCCAAGTCGTACTCCCCAGGAAGAAGACGCCGG...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGGTGTGGTTTGTGGGTaGCACCCGTGCCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSGVVCG*HPCPPR
Trigger: GCGTGGAGGGCACGGGTGCCACCCACAAACCACACC...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTGTGGAAGGCGCTGGCTaGGGTCGGGCTCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: QAGDATGTDSEAALNLKCVEGAG*GRAPCS
Trigger: AGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCAC...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTTGGAGTGGAAGGCGCTaGCTGGGGTCGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: QAGDATGTDSEAALNLKCWSGRR*LGSGSM
Trigger: CATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCA...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACGGGACTTGGCATTGCTaGACATCCAGTTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHGTWHC*TSSSSR
Trigger: CCGGGAAGAACTGGATGTTCAGCAATGCCAAGTCCC...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGCTGGGCCAGGCTGGTaGCAAACTCCTCGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRAGPGW*QTPRAA
Trigger: CGCAGCACGAGGAGTTTGTCACCAGCCTGGCCCAGC...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCCAAGGAGCCACGGGGTaGGGCTGGTCAAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLQGATG*GWSNQG
Trigger: CCCTTGGTTTGACCAGCCTCACCCCGTGGCTCCTTG...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGGGCGGGAAGCGGTTaGAGTTGTGGGGGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRGAGSG*SCGGAE
Trigger: CTCCGCACCCCCACAACTTCAACCGCTTCCCGCCCC...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAGTCGTCCTGCATaGAGCGGGGCGGGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRGSRPA*SGAGSG
Trigger: ACCGCTTCCCGCCCCGCTTCATGCAGGACGACTTCC...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAATCGTTGATGCCAGGATaGGGCATGCGGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGESLMPG*GMRWPG
Trigger: CCCTGGCCACCGCATGCCTCATCCTGGCATCAACGA...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGGGCTCCTGGACCGTaGCCGGCGTCTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRGAPGP*PASSSW
Trigger: CCAGGAAGAAGACGCCGGTCACGGTCCAGGAGCCCC...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAACTGAGCGCCAGCAAGTaGTGCTCCTGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGELSASK*CSCCWR
Trigger: CCTCCAGCAGCAGGAGCAGCACTTGCTGGCGCTCAG...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTACGGCCGCTGTCACTTaGTCCTGTCTGAGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSTAAVT*SCLSAS
Trigger: GCTGGCGCTCAGACAGGAGCAAGTGACAGCGGCCGT...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAATGGTTGAACTGCGGGTaGTGCTGGTGGGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGEWLNCG*CWWGGK
Trigger: CTTCCCGCCCCACCAGCAGCACCCGCAGTTCAACCA...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGCGGGAAGTCGTCCTaGATGAAGCGGGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRGGKSS*MKRGGK
Trigger: CTTCCCGCCCCGCTTCATGCAGGACGACTTCCCGCC...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGAATTGCACCAGGCTaGCCATGGACACCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHGIAPG*PWTPGV
Trigger: CACACCTGGTGTCCATGGGCAGCCTGGTGCAATTCC...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGTGGCAGGGGTGGCATaGTGGCGGCTGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRVAGVA*WRLAPA
Trigger: AGCTGGAGCCAGCCGCCACCATGCCACCCCTGCCAC...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGTGCTGCTCCACCGCGTaGGCCACGGCCGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRCCSTA*ATAAVT
Trigger: AGTGACAGCGGCCGTGGCCCACGCGGTGGAGCAGCA...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTCCACGGCCAAGAAGCTaGTGCAGTAGATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRPRPRS*CSRWAP
Trigger: TGGTGCCCATCTACTGCACCAGCTTCTTGGCCGTGG...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGTGTCATCAGGCTGGGTaGTGGGCGGGATGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRCHQAG*WAGWQG
Trigger: CCCCTGCCATCCCGCCCACCACCCAGCCTGATGACA...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAATTGTTTGGTGGGATCTaGTCGTGTGGCCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGELFGGI*SCGPGP
Trigger: GGGCCCCGGGCCACACGACCAGATCCCACCAAACAA...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGTGGTGCGGGTAGGGTaGCTGCTCTGGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRVVRVG*LLWRLL
Trigger: CAGCAGCCGCCAGAGCAGCCACCCTACCCGCACCAC...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGCAGGGGCCCTCGAACTaGCTGTTCCAGGCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRQGPSN*LFQAAS
Trigger: CGACGCCGCCTGGAACAGCCAGTTCGAGGGCCCCTG...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAATCATCGTGGTTGATGTaGGGTGGGCCCTGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGESSWLM*GGPCRR
Trigger: GCGGCGACAGGGCCCACCCCACATCAACCACGATGA...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCGAAGTAGGGCACATTaGGGACCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVRSRAH*GPGWGH
Trigger: ATGACCCCAGCCTGGTCCCCAATGTGCCCTACTTCG...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACAACGCCCTCGACTCTTaGATCTGCTCCGAGACCTCG +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHNALDS*ICSETS
Trigger: CGAGGTCTCGGAGCAGATCCAAGAGTCGAGGGCGTT...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGACCGGGACCGCGACTaGGACCGGGAGCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRDRDRD*DRERLL
Trigger: CAGAAGCCGCTCCCGGTCCCAGTCGCGGTCCCGGTC...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACCCCTTGATGGGGTCCTaGATCCCTTGCTCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHPLMGS*IPCSFA
Trigger: TGCGAAGGAGCAAGGGATCCAGGACCCCATCAAGGG...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACCCACTGGGCATGCGCTaGTCTTCCTTCTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHPLGMR*SSFSSC
Trigger: ACAGGAAGAGAAGGAAGACCAGCGCATGCCCAGTGG...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCACGGCGTTCCCACTaGGCATGCGCTGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSARRSH*ACAGLP
Trigger: AGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGC...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTGGCTGCAGCGCCTCCTaGTGTGGTTTGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QAGDATGTDSEAALNLKCGCSAS*CGLWVA
Trigger: TGCCACCCACAAACCACACCAGGAGGCGCTGCAGCC...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGGCTCCATGCTCTGGATaGGACTGGGCCGTCGCACAC +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRAPCSG*DWAVAH
Trigger: GTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGTCGGGCTCCATGCTCTaGATGGGACTGGGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRSGSML*MGLGRR
Trigger: GCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGA...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACTGGAGCTTCGTACTCTaGAGAGCCAGGCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHWSFVL*RARHLD
Trigger: ATCCAGATGCCTGGCTCTTCAGAGTACGAAGCTCCA...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGTCGTTGATGCCAGGATaGGGCATGCGGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATSLMPG*GMRWPG
Trigger: CCCTGGCCACCGCATGCCTCATCCTGGCATCAACGA...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCCGCACCGAGGCCGCCTaGGCCGCTCCAGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVRTEAA*AAPAHL
Trigger: AAGATGGGCTGGAGCGGCTCAGGCGGCCTCGGTGCG...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCCTTCATGCGGGCGATaGAGGAGTAGCTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVPSCGR*RSSSCS
Trigger: GGAACAAGAGCTACTCCTTCATCGCCCGCATGAAGG...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACAGGCAGCGCTCAACCTaGAGTGTCTTAGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHRQRST*SVLGWF
Trigger: AAACCAGCCTAAGACACTTCAGGTTGAGCGCTGCCT...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCCAGATGAGCTGCTGCTaGTCCAGCGCCAGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLQMSCC*SSASLH
Trigger: GTGCAAGCTGGCGCTGGAGCAGCAGCAGCTCATCTG...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCTCCAGCTCCGGGGTCTaGTGCTTGCAGATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLSSSGV*CLQMSC
Trigger: GCAGCTCATCTGCAAGCAGCAGACCCCGGAGCTGGA...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAAGAAGCTTCTGCATCTaGTGCTCCACCGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGERSFCI*CSTAWA
Trigger: GGCCCACGCGGTGGAGCAGCAGATGCAGAAGCTTCT...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGGCCATCAGCTCACAGTaGGGCGGGGACTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRAISSQ*GGDLAL
Trigger: CAATGCCAAGTCCCCGCCGCACTGTGAGCTGATGGC...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGCCGCAGCTCGAAGTGTaGCCCATCAGCCGTGATGCG +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLPQLEV*PISRDA
Trigger: CGCATCACGGCTGATGGGGCACACTTCGAGCTGCGG...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTTTTTTCTCCCAGAGCTaGAGGAGCCGGGCGATCTTC +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRFFSQS*RSRAIF
Trigger: GAAGATCGCCCGGCTCCTGCAGCTCTGGGAGAAAAA...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGTGTTGCTGCTGCTGCTaGTGCTGGGCCAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLCCCCC*CWARLV
Trigger: CACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACA...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGATGCTCTGGCGGCTGCTaGTGGCCCCAAGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRCSGGC*WPQGAT
Trigger: CGTGGCTCCTTGGGGCCAGCAGCAGCCGCCAGAGCA...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATCCGGGGTCACCGCGCTaGTCGCCCCACATGCCCTCA +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDPGSPR*SPHMPS
Trigger: TGAGGGCATGTGGGGCGAGCAGCGCGGTGACCCCGG...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGGTAGAAGGCCTCCACTaGAGCCAGCAGCCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRVEGLH*SQQPLA
Trigger: AGCGAGAGGCTGCTGGCTGCAGTGGAGGCCTTCTAC...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTGCACACGCCAGCCGGTaGAGGGTTCTTCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: QAGDATGTDSEAALNLKCAHASR*RVLPSA
Trigger: TGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGC...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGTGGGGTCGGGCTCCATaGTCTGGATGGGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRWGRAP*SGWDWA
Trigger: GGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCA...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGATGGCATGGTGGCGGCTaGCTCCAGCTCCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRWHGGG*LQLRGL
Trigger: CAGACCCCGGAGCTGGAGCCAGCCGCCACCATGCCA...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGATGCGGTTCCGGAGGTaGCCGGCCATCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLMRFRR*PAISSQ
Trigger: CTGTGAGCTGATGGCCGGCCACCTCCGGAACCGCAT...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGGCCAGCTGCACCGGCTaGACCACTGAGGAGTACTCG +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLASCTG*TTEEYS
Trigger: CGAGTACTCCTCAGTGGTCCAGCCGGTGCAGCTGGC...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTAGCCAGGCATCTGGATaGGAGGCTTGCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVSQASG*EACCHQ
Trigger: CTGATGACAGCAAGCCTCCCATCCAGATGCCTGGCT...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGAGGCTGGGGTCATCGTaGTTGATGTGGGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATRLGSS*LMWGGP
Trigger: GGGCCCACCCCACATCAACCACGATGACCCCAGCCT...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTTGGAGGATCTTGAGTTaGAGCGGGAGGAAGAACGCC +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVWRILS*SGRKNA
Trigger: GGCGTTCTTCCTCCCGCTCCAACTCAAGATCCTCCA...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGCGCGGCTCCCGGCATaGGCGCCTACTTACACTCGT +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRARLPA*APTYTR
Trigger: ACGAGTGTAAGTAGGCGCCCATGCCGGGAGCCGCGC...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGATCCGCGGGCAGTCATaGCACTGGGCTTCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRIRGQS*HWASAL
Trigger: CAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGAT...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGCACCAGGCTGCCCATaGACACCAGGTGTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATAPGCP*TPGVAD
Trigger: ATCGGCCACACCTGGTGTCCATGGGCAGCCTGGTGC...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGTGGTGCACGTGTCGATaGTGGGCTGCAGGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRWCTCR*WAAGGC
Trigger: ACAACCTCCTGCAGCCCATCATCGACACGTGCACCA...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACTGGAGCTTCGTACTCTaGAGAGCCAGGCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHWSFVL*RARHLD
Trigger: ATCCAGATGCCTGGCTCTTCAGAGTACGAAGCTCCA...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCGGGGCGGGAAGCGGTTaGAGTTGTGGGGGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVGAGSG*SCGGAE
Trigger: CTCCGCACCCCCACAACTTCAACCGCTTCCCGCCCC...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACAGACTTGGAGGATCTTaGGTTGGAGCGGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHRLGGS*VGAGGR
Trigger: TCTTCCTCCCGCTCCAACTCAAGATCCTCCAAGTCT...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTTTGCAGATGAGCTGCTaGTGCTCCAGCGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSLQMSC*CSSASL
Trigger: CAAGCTGGCGCTGGAGCAGCAGCAGCTCATCTGCAA...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGTTGCAGATGAGCTGCTaGTGCTCCAGCGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRLQMSC*CSSASL
Trigger: CAAGCTGGCGCTGGAGCAGCAGCAGCTCATCTGCAA...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGAGCTCCGGGGTCTGCTaGTTGCAGATGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATSSGVC*LQMSCC
Trigger: GCAGCAGCTCATCTGCAAGCAGCAGACCCCGGAGCT...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGCTGAGCGCCAGCAAGTaGTGCTCCTGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRLSASK*CSCCWR
Trigger: CCTCCAGCAGCAGGAGCAGCACTTGCTGGCGCTCAG...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGAGAAGCTTCTGCATCTaGTGCTCCACCGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATRSFCI*CSTAWA
Trigger: GGCCCACGCGGTGGAGCAGCAGATGCAGAAGCTTCT...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGGCCATCAGCTCACAGTaGGGCGGGGACTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLAISSQ*GGDLAL
Trigger: CAATGCCAAGTCCCCGCCGCACTGTGAGCTGATGGC...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGCGGGCGATCTTCTGCTaGTTGTCTTCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLRAIFC*LSSSTA
Trigger: GGCCGTGGAGGAAGACAAGCAGCAGAAGATCGCCCG...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTACAAACTCCTCGTGCTaGGTCTTGAGGGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRTNSSC*VLRVWI
Trigger: GATCCAGACCCTCAAGACGCAGCACGAGGAGTTTGT...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGTGCGGCATCTGGAGCTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATCGIWS*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCA...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGTCTGGATGGGAGGCTTaGTGTCATCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRSGWEA*CHQAGW
Trigger: CCACCCAGCCTGATGACAGCAAGCCTCCCATCCAGA...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGAGGCTGGTTGAACTaGGGGTGCTGCTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRGGWLN*GCCWWG
Trigger: GCCCCACCAGCAGCACCCGCAGTTCAACCAGCCTCC...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGTGCCAGGATGAGGCATaGGGTGGCCAGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRCQDEA*GGQGGG
Trigger: ACCACCACCCTGGCCACCGCATGCCTCATCCTGGCA...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCGGGCCGAAGTCAGGGTaGTGGGGTCCAGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVGPKSG*WGPAQG
Trigger: GCCTTGGGCTGGACCCCAGCACCCTGACTTCGGCCC...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACTTCCACTGGCTCTGCTaGATGAGCTCGTCCATGGAT +
Preference number: 4 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHFHWLC*MSSSMD
Trigger: ATCCATGGACGAGCTCATCCAGCAGAGCCAGTGGAA...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGTCTTCCCGGCCGAGATaGCGTCCTTGGTGCACGTGT +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRSSRPR*RPWCTC
Trigger: ACACGTGCACCAAGGACGCCATCTCGGCCGGGAAGA...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGCGCGTCAGGGCCCAGTaGTGCAGCACGTCATTGATC +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATRVRAQ*CSTSLI
Trigger: GATCAATGACGTGCTGCACCACTGGGCCCTGACGCG...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000198939.6
CDS-3UTR CCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTTGCGTCTTGAGGGTCTaGATCTGCTGCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSCVLRV*ICCWKA
Trigger: GGCCTTCCAGCAGCAGATCCAGACCCTCAAGACGCA...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAACCAAGGGGGCTTGTTTaGTGGGATCTGGTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGEPRGLV*WDLVVW
Trigger: CCACACGACCAGATCCCACCAAACAAGCCCCCTTGG...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCTGCATGCGGAAGGGTaGCTCGCGCTGGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVLHAEG*LALAPA
Trigger: GGCGGGGGCCAGCGCGAGCCACCCTTCCGCATGCAG...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTAAGCGGTTGAAGTTGTaGGGGTGCGGAGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QAGDATGTDSEAALNLKCKRLKL*GCGGWL
Trigger: CAACCAGCCTCCGCACCCCCACAACTTCAACCGCTT...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGCTCGAAGGGGTGCCGTaGCGGGAAGTCGTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRLEGVP*REVVLH
Trigger: ATGCAGGACGACTTCCCGCCACGGCACCCCTTCGAG...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCGGGGTGGGGCTCCTaGACCGTGACCGGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTAGWGS*TVTGVF
Trigger: GAAGACGCCGGTCACGGTCCAGGAGCCCCACCCCGC...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGTGCCCTCCACGCCATaGAGCACGGCGTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRVPSTP*STAFPL
Trigger: CAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCAC...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCACATCCATCCCTTCGTaGCTGAAGAATTTACTCGGG +
Preference number: 4 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRTSIPS*LKNLLG
Trigger: CCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGT...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGGGGCAGTCATGGCACTaGGCTTCGGCTTTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRGQSWH*ASALSL
Trigger: TAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCC...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTAATGAAATGATGGAGTaGAAGGCGCTGGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVNEMME*KALAGV
Trigger: GACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGACGGGCCTGCTTGCGCTaGCAGTGGTGCAGCACGTCA +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRRACLR*QWCSTS
Trigger: TGACGTGCTGCACCACTGCCAGCGCAAGCAGGCCCG...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546361.7
CDS-3UTR TCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGCACCGGCTGGACCACTaGGGAGTACTCGTTGATGAG +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRHRLDH*GVLVDE
Trigger: CTCATCAACGAGTACTCCTCAGTGGTCCAGCCGGTG...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGACGTCCCCGCCCTTaGTGGGGTCCTGGATCCCTT +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDGRPRP*WGPGSL
Trigger: AAGGGATCCAGGACCCCATCAAGGGCGGGGACGTCC...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCCATCCCTTCGTGGCTaGAGAATTTACTCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: QAGDATGTDSEAALNLKCPSLRG*RIYSGG
Trigger: TCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGG...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGAGCTCCGGGGTCTGCTaGTTGCAGATGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRSSGVC*LQMSCC
Trigger: GCAGCAGCTCATCTGCAAGCAGCAGACCCCGGAGCT...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGAGGTTCCACTGGCTCTaGTGGATGAGCTCGTCCATG +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRRFHWL*WMSSSM
Trigger: CATGGACGAGCTCATCCAGCAGAGCCAGTGGAACCT...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGATGCTGGAAGGCCAGCTaGACCGGCTGGACCACTGAG +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRCWKAS*TGWTTE
Trigger: CTCAGTGGTCCAGCCGGTGCAGCTGGCCTTCCAGCA...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTTTGAGGGTCTGGATCTaGTGCTGGAAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPLRVWI*CWKASC
Trigger: GCAGCTGGCCTTCCAGCAGCAGATCCAGACCCTCAA...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGACTTCAGCCTCCATCTaGGGCATCTGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLTSASI*GIWSCC
Trigger: GCAGCAGCTCCAGATGCCGCAGATGGAGGCTGAAGT...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGTCTGGATGGGAGGCTTaGTGTCATCAGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRSGWEA*CHQAGW
Trigger: CCACCCAGCCTGATGACAGCAAGCCTCCCATCCAGA...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGAGGCTGGTTGAACTaGGGGTGCTGCTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDGGWLN*GCCWWG
Trigger: GCCCCACCAGCAGCACCCGCAGTTCAACCAGCCTCC...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGCAGGCCAACCCTTCCTaGACATGCTCCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRQANPS*TCSSWS
Trigger: GCTCCAGGAGGAGCATGTGCAGGAAGGGTTGGCCTG...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTTTGCGAGCCACGAACTaGGCGAGCTTGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSLRATN*ASLSMT
Trigger: TGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAA...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCGCAGGGGTGGCATGGTaGCGGCTGGCTCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVAGVAW*RLAPAP
Trigger: CGGAGCTGGAGCCAGCCGCCACCATGCCACCCCTGC...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGTGCGTCTTGAGGGTCTaGATCTGCTGCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATCVLRV*ICCWKA
Trigger: GGCCTTCCAGCAGCAGATCCAGACCCTCAAGACGCA...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTTCCATCTGCGGCATCTaGAGCTGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPSICGI*SCCCCC
Trigger: ACAGCAGCAGCAGCAGCTCCAGATGCCGCAGATGGA...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATTGTCATCAGGCTGGGTaGTGGGCGGGATGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDCHQAG*WAGWQG
Trigger: CCCCTGCCATCCCGCCCACCACCCAGCCTGATGACA...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACACAGAGGAAGGCGGGGTaGGGCTCCTGGACCGTGACC +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTQRKAG*GSWTVT
Trigger: GGTCACGGTCCAGGAGCCCCACCCCGCCTTCCTCTG...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCCCCACGCCTTTATACTaGTCCCACTTATCCCGGACG +
Preference number: 4 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLPTPLY*SHLSRT
Trigger: CGTCCGGGATAAGTGGGACCAGTATAAAGGCGTGGG...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGCTGGAGGAAGGAGCTaGGGTGCCGGCTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDAGGRS*GAGSGS
Trigger: TGAGCCAGAGCCGGCACCCCAGCTCCTTCCTCCAGC...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATTGCTCTGGATGGGACTaGGCCGTCGCACACGCCAGC +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDCSGWD*AVAHAS
Trigger: GCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCA...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGCATGGACACCAGGTGTaGCCGATTCCCAACGGTCAC +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRHGHQV*PIPNGH
Trigger: GTGACCGTTGGGAATCGGCCACACCTGGTGTCCATG...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGGCGAGCTTGTCGATaGCATTTCGAAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATGRACR*HFEAPG
Trigger: ACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCC...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAAAGGCGGGTGCTCGTTaGTGCCAGGATGAGGCATGC +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRKAGAR*CQDEAC
Trigger: GCATGCCTCATCCTGGCATCAACGAGCACCCGCCTT...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATTGGGGTCATCGTGGTTaGTGTGGGGTGGGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDWGHRG*CGVGPV
Trigger: GACAGGGCCCACCCCACATCAACCACGATGACCCCA...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAAGACTTGGAGGATCTTaGGTTGGAGCGGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGERLGGS*VGAGGR
Trigger: TCTTCCTCCCGCTCCAACTCAAGATCCTCCAAGTCT...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGCCTTCATGCGGGCGATaGAGGAGTAGCTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRPSCGR*RSSSCS
Trigger: GGAACAAGAGCTACTCCTTCATCGCCCGCATGAAGG...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTAGACGGTGTAAGAACTaGGCTGTCACTGCAATCTTC +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVRRCKN*AVTAIF
Trigger: GAAGATTGCAGTGACAGCTCAGTTCTTACACCGTCT...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGCTCCCTTCGGGGGTGTaGAATGAAATGATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRLPSGV*NEMMEW
Trigger: CCACTCCATCATTTCATTTCACACCCCCGAAGGGAG...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGACAAACTCGGGCCCATTaGGAGCCACGAACTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRQTRAH*EPRTGR
Trigger: TCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTTTG...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGTTTTTCTCCCAGAGCTaGAGGAGCCGGGCGATCTTC +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRFFSQS*RSRAIF
Trigger: GAAGATCGCCCGGCTCCTGCAGCTCTGGGAGAAAAA...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGTTGAGGGTCTGGATCTaGTGCTGGAAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRLRVWI*CWKASC
Trigger: GCAGCTGGCCTTCCAGCAGCAGATCCAGACCCTCAA...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTAGTAGCTCTTGTTCCTaGGGTAGTTCTCATAGGGGT +
Preference number: 4 (lower is better)
Translates to: APCSGWDWAVAHASRCRVSSSCS*GSSHRG
Trigger: ACCCCTATGAGAACTACCGCAGGAACAAGAGCTACT...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACATGTGGGTGGCACCCGTaGCCTCCACGCCATGGAGCA +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTCGWHP*PPRHGA
Trigger: TGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACA...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTAACCCTTCCTGCACATaGTCCTCCTGGAGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPNPSCT*SSWSLG
Trigger: TCCTAGGCTCCAGGAGGAGCATGTGCAGGAAGGGTT...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCATGCGGTTCCGGAGGTaGCCGGCCATCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVMRFRR*PAISSQ
Trigger: CTGTGAGCTGATGGCCGGCCACCTCCGGAACCGCAT...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATTTGTTTGGTGGGATCTaGTCGTGTGGCCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDLFGGI*SCGPGP
Trigger: GGGCCCCGGGCCACACGACCAGATCCCACCAAACAA...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAACAGGGCGCGTCGCGCTaGCCGTTCCAGCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEEQGASR*PFQPGS
Trigger: TGACCCCGGCTGGAACGGCCAGCGCGACGCGCCCTG...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCGTGGTTGATGTGGGGTaGGCCCTGTCGCCGCATGTG +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVVVDVG*ALSPHV
Trigger: CACATGCGGCGACAGGGCCCACCCCACATCAACCAC...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATAGCCTTCACTGTTCCTaGGCCTGTCGTGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDSLHCS*ACRGTG
Trigger: CCCCGTCCCACGACAGGCCCAGGAACAGTGAAGGCT...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGGTGTGGTTTGTGGGTaGCACCCGTGCCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTGVVCG*HPCPPR
Trigger: GCGTGGAGGGCACGGGTGCCACCCACAAACCACACC...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCTCCTGGTGTGGTTTGTaGGTGGCACCCGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVSWCGL*VAPVPS
Trigger: GGAGGGCACGGGTGCCACCCACAAACCACACCAGGA...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCGGCTGCAGCGCCTCCTaGTGTGGTTTGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVGCSAS*CGLWVA
Trigger: TGCCACCCACAAACCACACCAGGAGGCGCTGCAGCC...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACATCGGGCTCCATGCTCTaGATGGGACTGGGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTSGSML*MGLGRR
Trigger: GCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGA...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACTTCTGTACAAATGAATaGAATTGCACCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KALAGVGLHALDGTGPSHFCTNE*NCTRLP
Trigger: GGGCAGCCTGGTGCAATTCCATTCATTTGTACAGAA...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGGCGAGCTTGTCGATaGCATTTCGAAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRGRACR*HFEAPG
Trigger: ACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCC...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGATCACTTGCTCCTGTCTaGGCGCCAGCAAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRSLAPV*APASAA
Trigger: AGCAGCACTTGCTGGCGCTCAGACAGGAGCAAGTGA...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGGACTTGGCATTGCTaGACATCCAGTTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRGTWHC*TSSSSR
Trigger: CCGGGAAGAACTGGATGTTCAGCAATGCCAAGTCCC...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGGGCTCTGTAGCTGCTaGATGATGGAGTCATCGAAG +
Preference number: 4 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPGLCSC*MMESSK
Trigger: CTTCGATGACTCCATCATTCAGCAGCTACAGAGCCC...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTAAAGGCTTGTACTCGTaGTCTTCCAGCTTCACGAGG +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSKGLYS*SSSFTR
Trigger: CCTCGTGAAGCTGGAAGATCACGAGTACAAGCCTTT...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCGGACGTCCCCGCCCTTaGTGGGGTCCTGGATCCCTT +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVGRPRP*WGPGSL
Trigger: AAGGGATCCAGGACCCCATCAAGGGCGGGGACGTCC...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGAGGAGGCTTCAATCTaGCTTAGGGCAGATGCACAT +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSEEASI*LRADAH
Trigger: ATGTGCATCTGCCCTAAGTCAGATTGAAGCCTCCTC...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAGGCAGCGCTCAACCTaGAGTGTCTTAGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLRQRST*SVLGWF
Trigger: AAACCAGCCTAAGACACTTCAGGTTGAGCGCTGCCT...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATCAAACTCGGGCCCATTaGGAGCCACGAACTGGGCGA +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDQTRAH*EPRTGR
Trigger: TCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTTTG...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCCGGGCGATCTTCTGCTaGTTGTCTTCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVRAIFC*LSSSTA
Trigger: GGCCGTGGAGGAAGACAAGCAGCAGAAGATCGCCCG...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTACAAACTCCTCGTGCTaGGTCTTGAGGGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPTNSSC*VLRVWI
Trigger: GATCCAGACCCTCAAGACGCAGCACGAGGAGTTTGT...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAACCGCCCCAGGGCGGCTaGTCGTGCTGGCTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEEPPQGG*SCWLFQ
Trigger: CTGGAACAGCCAGCACGAGCAGCCGCCCTGGGGCGG...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGACTCGACTCTTGGATCTaGTCCGAGACCTCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRLDSWI*SETSRV
Trigger: GACCCTCGAGGTCTCGGAGCAGATCCAAGAGTCGAG...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGTTGCGCTGGCAGTGGTaGAGCACGTCATTGATCAGG +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRLRWQW*STSLIR
Trigger: CCTGATCAATGACGTGCTGCACCACTGCCAGCGCAA...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546361.7
CDS-3UTR CCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGTTCCACTGGCTCTGCTaGATGAGCTCGTCCATGGAT +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLFHWLC*MSSSMD
Trigger: ATCCATGGACGAGCTCATCCAGCAGAGCCAGTGGAA...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCTCGTTCATGTCTAGCTaGGTCTCCTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLSFMSS*VSSRSF
Trigger: GAAGCTTCTGGAGGAGACCCAGCTAGACATGAACGA...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATTGCTGCTGCTGCTGCTaGGCCAGGCTGGTGACAAAC +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDCCCCC*ARLVTN
Trigger: GTTTGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCA...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGACGAAGTAGGGCACATTaGGGACCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRRSRAH*GPGWGH
Trigger: ATGACCCCAGCCTGGTCCCCAATGTGCCCTACTTCG...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAAACGCCCTCGACTCTTaGATCTGCTCCGAGACCTCG +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRNALDS*ICSETS
Trigger: CGAGGTCTCGGAGCAGATCCAAGAGTCGAGGGCGTT...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGACCCTTGATGGGGTCCTaGATCCCTTGCTCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRPLMGS*IPCSFA
Trigger: TGCGAAGGAGCAAGGGATCCAGGACCCCATCAAGGG...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAATTCCTTCTCTTCCTGTaGCTCTCCACAAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGEFLLFL*LSTSGD
Trigger: GTCTCCACTTGTGGAGAGCCACAGGAAGAGAAGGAA...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGTTCCTTCTCTTCCTGTaGCTCTCCACAAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRFLLFL*LSTSGD
Trigger: GTCTCCACTTGTGGAGAGCCACAGGAAGAGAAGGAA...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACACAGCGCCTCCTGGTGTaGTTTGTGGGTGGCACCCGT +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTQRLLV*FVGGTR
Trigger: ACGGGTGCCACCCACAAACCACACCAGGAGGCGCTG...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCTGGGGTGCCGGCTCTaGCTCAGGCCAACCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVLGCRL*LRPTLP
Trigger: AGGAAGGGTTGGCCTGAGCCAGAGCCGGCACCCCAG...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCGCTGGAGGAAGGAGCTaGGGTGCCGGCTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVAGGRS*GAGSGS
Trigger: TGAGCCAGAGCCGGCACCCCAGCTCCTTCCTCCAGC...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCATCCGCGGGCAGTCATaGCACTGGGCTTCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVIRGQS*HWASAL
Trigger: CAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGAT...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGTTTCAGAATCTCACTaGGCCTCCTCTCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSVSESH*ASSQVS
Trigger: ACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAAC...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCTGCTCTGGATGGGACTaGGCCGTCGCACACGCCAGC +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVCSGWD*AVAHAS
Trigger: GCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCA...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGAATGAAATGATGGAGTaGAAGGCGCTGGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRNEMME*KALAGV
Trigger: GACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGACATGGACACCAGGTGTaGCCGATTCCCAACGGTCAC +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRHGHQV*PIPNGH
Trigger: GTGACCGTTGGGAATCGGCCACACCTGGTGTCCATG...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGTCTGTAGCTGCTGAATaGTGGAGTCATCGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GDATGTDSEAALNLKCLRSVAAE*WSHRSS
Trigger: GCTACTTCGATGACTCCATCATTCAGCAGCTACAGA...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACACCTCGTGCTGCGTCTTaGGGGTCTGGATCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTPRAAS*GSGSAA
Trigger: AGCAGCAGATCCAGACCCTCAAGACGCAGCACGAGG...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGTTCGGGGGTGTGAAATaGAATGATGGAGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KTQAGDATGTDSEAALNLFGGVK*NDGVEG
Trigger: GCCTTCCACTCCATCATTTCATTTCACACCCCCGAA...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGTGACAAACTCCTCGTaGTGCGTCTTGAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRVTNSS*CVLRVW
Trigger: CCAGACCCTCAAGACGCAGCACGAGGAGTTTGTCAC...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGAACTGAGCTGTCACTaGAATCTTCCTCTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRELSCH*NLPLPV
Trigger: GACTGGCAGAGGAAGATTGCAGTGACAGCTCAGTTC...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGCAGGGTTCTTCCAAGTaGAAAACTCAAGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRQGSSK*KTQAGD
Trigger: GTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTG...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTTCGTTCATGTCTAGCTaGGTCTCCTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPSFMSS*VSSRSF
Trigger: GAAGCTTCTGGAGGAGACCCAGCTAGACATGAACGA...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACATTGCTGTCATCAGGCTaGGTGGTGGGCGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTLLSSG*VVGGMA
Trigger: TGCCATCCCGCCCACCACCCAGCCTGATGACAGCAA...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGAAGAGCCAGGCATCTaGATGGGAGGCTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLREEPGI*MGGLLS
Trigger: TGACAGCAAGCCTCCCATCCAGATGCCTGGCTCTTC...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATCCAAGGGGGCTTGTTTaGTGGGATCTGGTCGTGTGG +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDPRGLV*WDLVVW
Trigger: CCACACGACCAGATCCCACCAAACAAGCCCCCTTGG...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCTCATCGTGGTTGATGTaGGGTGGGCCCTGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVSSWLM*GGPCRR
Trigger: GCGGCGACAGGGCCCACCCCACATCAACCACGATGA...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCAGGCTGGGGTCATCGTaGTTGATGTGGGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVRLGSS*LMWGGP
Trigger: GGGCCCACCCCACATCAACCACGATGACCCCAGCCT...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAACATCCATCCCTTCGTaGCTGAAGAATTTACTCGGG +
Preference number: 4 (lower is better)
Translates to: RGQSWHWASALSLHSRGETSIPS*LKNLLG
Trigger: CCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGT...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCGGGCAGTCATGGCACTaGGCTTCGGCTTTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVGQSWH*ASALSL
Trigger: TAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCC...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACACACCGGCTGGACCACTaGGGAGTACTCGTTGATGAG +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTHRLDH*GVLVDE
Trigger: CTCATCAACGAGTACTCCTCAGTGGTCCAGCCGGTG...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAAGGTGCGGAGGCTGGTTaGACTGCGGGTGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEEGAEAG*TAGAAG
Trigger: ACCAGCAGCACCCGCAGTTCAACCAGCCTCCGCACC...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGACTCCCTTCGGGGGTGTaGAATGAAATGATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRLPSGV*NEMMEW
Trigger: CCACTCCATCATTTCATTTCACACCCCCGAAGGGAG...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAAGCAAGTGCTGCTCCTaGTGCTGGAGGTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTSKCCS*CWRFHW
Trigger: CCAGTGGAACCTCCAGCAGCAGGAGCAGCACTTGCT...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAAGCCGGGCGATCTTCTaGTGCTTGTCTTCCTCCACG +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTSRAIF*CLSSST
Trigger: CGTGGAGGAAGACAAGCAGCAGAAGATCGCCCGGCT...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTGAACTGCGGGTGCTaGTGGTGGGGCGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEELNCGC*WWGGKG
Trigger: GCCCTTCCCGCCCCACCAGCAGCACCCGCAGTTCAA...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGAAGAGCCAGGCATCTaGATGGGAGGCTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDEEPGI*MGGLLS
Trigger: TGACAGCAAGCCTCCCATCCAGATGCCTGGCTCTTC...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAACTGTCGCCGCATGTGTaGGGGCTGCCCGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEELSPHV*GLPVEA
Trigger: GGCTTCAACGGGCAGCCCCCACACATGCGGCGACAG...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCTGCTTGCGCTGGCAGTaGTGCAGCACGTCATTGATC +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVCLRWQ*CSTSLI
Trigger: GATCAATGACGTGCTGCACCACTGCCAGCGCAAGCA...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546361.7
CDS-3UTR TCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAAGTGGAGGCGTGGCCTTaGCTTCAGCCTCCATCTGCG +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEEVEAWP*LQPPSA
Trigger: CGCAGATGGAGGCTGAAGTCAAGGCCACGCCTCCAC...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGAGGAGGCTTCAATCTaGCTTAGGGCAGATGCACAT +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLREEASI*LRADAH
Trigger: ATGTGCATCTGCCCTAAGTCAGATTGAAGCCTCCTC...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTTTGGGGTTGTCCTTCTaGTTCTCCATAGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPLGLSF*FSIVIF
Trigger: GAAGATGACTATGGAGAAGCAGAAGGACAACCCCAA...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAAGGTTCCACTGGCTCTaGTGGATGAGCTCGTCCATG +
Preference number: 4 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTRFHWL*WMSSSM
Trigger: CATGGACGAGCTCATCCAGCAGAGCCAGTGGAACCT...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAAAGCTTCTGCATCTGCTaGTCCACCGCGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEESFCIC*STAWAT
Trigger: CGTGGCCCACGCGGTGGAGCAGCAGATGCAGAAGCT...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCGTGTCGATGATGGGCTaGAGGAGGTTGTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVVSMMG*RRLSNS
Trigger: CGAGTTTGACAACCTCCTGCAGCCCATCATCGACAC...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCGTCAGGGCCCAGTGGTaGAGCACGTCATTGATCAGG +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVVRAQW*STSLIR
Trigger: CCTGATCAATGACGTGCTGCACCACTGGGCCCTGAC...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000198939.6
CDS-3UTR GCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATGCCAGGATGAGGCATaGGGTGGCCAGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEECQDEA*GGQGGG
Trigger: ACCACCACCCTGGCCACCGCATGCCTCATCCTGGCA...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTGGGCTGTGGCAGGGGTaGCATGGTGGCGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSGLWQG*HGGGWL
Trigger: GAGCCAGCCGCCACCATGCCACCCCTGCCACAGCCC...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCTGCTGGAGGTTCCACTaGCTCTGCTGGATGAGCTCG +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVCWRFH*LCWMSS
Trigger: CGAGCTCATCCAGCAGAGCCAGTGGAACCTCCAGCA...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTGCGGGGTGGGGCTCCTaGACCGTGACCGGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSAGWGS*TVTGVF
Trigger: GAAGACGCCGGTCACGGTCCAGGAGCCCCACCCCGC...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAACAGCGCCTCCTGGTGTaGTTTGTGGGTGGCACCCGT +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEEQRLLV*FVGGTR
Trigger: ACGGGTGCCACCCACAAACCACACCAGGAGGCGCTG...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAACCTCGTGCTGCGTCTTaGGGGTCTGGATCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEEPRAAS*GSGSAA
Trigger: AGCAGCAGATCCAGACCCTCAAGACGCAGCACGAGG...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTGGGGCTCCTGGACCGTaGCCGGCGTCTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSGAPGP*PASSSW
Trigger: CCAGGAAGAAGACGCCGGTCACGGTCCAGGAGCCCC...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATTTCGGGGGTGTGAAATaGAATGATGGAGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDFGGVK*NDGVEG
Trigger: GCCTTCCACTCCATCATTTCATTTCACACCCCCGAA...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGCTCCAGCGCCAGCTTaGACTTGTAGTAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDAPAPA*TCSNCR
Trigger: TCTACAGTTACTACAAGTGCAAGCTGGCGCTGGAGC...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAACAGATGAGCTGCTGCTaGTCCAGCGCCAGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEEQMSCC*SSASLH
Trigger: GTGCAAGCTGGCGCTGGAGCAGCAGCAGCTCATCTG...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAAAGGGTCTGGATCTGCTaGTGGAAGGCCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEERVWIC*WKASCT
Trigger: GGTGCAGCTGGCCTTCCAGCAGCAGATCCAGACCCT...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAAGTAGAAGGCCTCCACTaGAGCCAGCAGCCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEEVEGLH*SQQPLA
Trigger: AGCGAGAGGCTGCTGGCTGCAGTGGAGGCCTTCTAC...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAAGTAGCTCTTGTTCCTaGGGTAGTTCTCATAGGGGT +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRSSSCS*GSSHRG
Trigger: ACCCCTATGAGAACTACCGCAGGAACAAGAGCTACT...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTAGGGCTGTGGCAGGGGTaGCATGGTGGCGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLGLWQG*HGGGWL
Trigger: GAGCCAGCCGCCACCATGCCACCCCTGCCACAGCCC...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATCTTCCCGGCCGAGATaGCGTCCTTGGTGCACGTGT +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEESSRPR*RPWCTC
Trigger: ACACGTGCACCAAGGACGCCATCTCGGCCGGGAAGA...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTAAACTGCGGGTGCTGCTaGTGGGGCGGGAAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLNCGCC*WGGKGP
Trigger: GGGGCCCTTCCCGCCCCACCAGCAGCACCCGCAGTT...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AATGAAATGATGGAGTGGAAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATACGAGCCTGAAGACTTaGAGGATCTTGAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: NEMMEWKALAGVGLHALDTSLKT*RILSWS
Trigger: GCTCCAACTCAAGATCCTCCAAGTCTTCAGGCTCGT...ATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCACTCCATCATTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCCACGCCTTTATACTaGTCCCACTTATCCCGGACG +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVPTPLY*SHLSRT
Trigger: CGTCCGGGATAAGTGGGACCAGTATAAAGGCGTGGG...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCACTGGGCATGCGCTaGTCTTCCTTCTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVPLGMR*SSFSSC
Trigger: ACAGGAAGAGAAGGAAGACCAGCGCATGCCCAGTGG...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTGGAAGTCGTCCTGCATaGAGCGGGGCGGGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSGSRPA*SGAGSG
Trigger: ACCGCTTCCCGCCCCGCTTCATGCAGGACGACTTCC...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGTTCATCACGTTGGGTTaGAAAGTTGGAAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRFITLG*KVGRFC
Trigger: GCAAAATCTTCCAACTTTTCAACCCAACGTGATGAA...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAAAGCAAGTGCTGCTCCTaGTGCTGGAGGTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEESKCCS*CWRFHW
Trigger: CCAGTGGAACCTCCAGCAGCAGGAGCAGCACTTGCT...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTGGGTCCTGGATCCCTTaGTCCTTCGCACCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSGSWIP*SFAPRP
Trigger: CGGCCTCGGTGCGAAGGAGCAAGGGATCCAGGACCC...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTGTGGGTGGCACCCGTaGCCTCCACGCCATGGAGCA +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSCGWHP*PPRHGA
Trigger: TGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACA...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAAGGAATTGCACCAGGCTaGCCATGGACACCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEEGIAPG*PWTPGV
Trigger: CACACCTGGTGTCCATGGGCAGCCTGGTGCAATTCC...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTACAGGGGCCCTCGAACTaGCTGTTCCAGGCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLQGPSN*LFQAAS
Trigger: CGACGCCGCCTGGAACAGCCAGTTCGAGGGCCCCTG...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTAACCGGGAGCGGCTTCTaGAGGAGCGCGACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLTGSGF*RSATCS
Trigger: GGAGCAGGTCGCGCTCCTCCAGAAGCCGCTCCCGGT...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTGTGGAAGGCGCTGGCTaGGGTCGGGCTCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSVEGAG*GRAPCS
Trigger: AGAGCATGGAGCCCGACCCCAGCCAGCGCCTTCCAC...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGATTCTGTACAAATGAATaGAATTGCACCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRFCTNE*NCTRLP
Trigger: GGGCAGCCTGGTGCAATTCCATTCATTTGTACAGAA...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCAAAGGCTTGTACTCGTaGTCTTCCAGCTTCACGAGG +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVKGLYS*SSSFTR
Trigger: CCTCGTGAAGCTGGAAGATCACGAGTACAAGCCTTT...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGATGTTTCTGTACAAATaGATGGAATTGCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRMFLYK*MELHQA
Trigger: AGCCTGGTGCAATTCCATTCATTTGTACAGAAACAT...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCTTGGGGTTGTCCTTCTaGTTCTCCATAGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVLGLSF*FSIVIF
Trigger: GAAGATGACTATGGAGAAGCAGAAGGACAACCCCAA...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTGCTGGAAGGCCAGCTaGACCGGCTGGACCACTGAG +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSCWKAS*TGWTTE
Trigger: CTCAGTGGTCCAGCCGGTGCAGCTGGCCTTCCAGCA...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAAGTGACAAACTCCTCGTaGTGCGTCTTGAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEEVTNSS*CVLRVW
Trigger: CCAGACCCTCAAGACGCAGCACGAGGAGTTTGTCAC...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTAGGCGGGAAGTCGTCCTaGATGAAGCGGGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLGGKSS*MKRGGK
Trigger: CTTCCCGCCCCGCTTCATGCAGGACGACTTCCCGCC...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTAGGGTCCTGGATCCCTTaGTCCTTCGCACCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLGSWIP*SFAPRP
Trigger: CGGCCTCGGTGCGAAGGAGCAAGGGATCCAGGACCC...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGAAAGAAACGAGAATTTaGGGTTGTCCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRKETRI*GCPSAS
Trigger: AGAAGCAGAAGGACAACCCCAAATTCTCGTTTCTTT...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAAAGCCAGGCATCTGGATaGGAGGCTTGCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEESQASG*EACCHQ
Trigger: CTGATGACAGCAAGCCTCCCATCCAGATGCCTGGCT...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTATGGGGGTGCGGAGGCTaGTTGAACTGCGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLWGCGG*LNCGCC
Trigger: GCAGCACCCGCAGTTCAACCAGCCTCCGCACCCCCA...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTGCACGGCGTTCCCACTaGGCATGCGCTGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSARRSH*ACAGLP
Trigger: AGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGC...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTGCACCAGGCTGCCCATaGACACCAGGTGTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSAPGCP*TPGVAD
Trigger: ATCGGCCACACCTGGTGTCCATGGGCAGCCTGGTGC...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTATGGGGTCATCGTGGTTaGTGTGGGGTGGGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLWGHRG*CGVGPV
Trigger: GACAGGGCCCACCCCACATCAACCACGATGACCCCA...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCAGACGGTGTAAGAACTaGGCTGTCACTGCAATCTTC +
Preference number: 4 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVRRCKN*AVTAIF
Trigger: GAAGATTGCAGTGACAGCTCAGTTCTTACACCGTCT...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTATGTTGCTGCTGCTGCTaGTGCTGGGCCAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLCCCCC*CWARLV
Trigger: CACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACA...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTGCGGCATCTGGAGCTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSCGIWS*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCA...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGGTGGGGGCCGCTGCATaGGGAAGGGTGGCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKVGAAA*GRVARA
Trigger: AGCGCGAGCCACCCTTCCGCATGCAGCGGCCCCCAC...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGCAGGCGGCGTCGGGCTaGTTGTTCCAGGGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKQAASG*LFQGAS
Trigger: CGACGCGCCCTGGAACAACCAGCCCGACGCCGCCTG...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTCCGGCGTCTTCTTCCTaGGGAGTACGACTTGGACCG +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSPASSS*GVRLGP
Trigger: CGGTCCAAGTCGTACTCCCCAGGAAGAAGACGCCGG...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCACTTGCTCCTGTCTaGGCGCCAGCAAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSSLAPV*APASAA
Trigger: AGCAGCACTTGCTGGCGCTCAGACAGGAGCAAGTGA...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTGGTGCACGTGTCGATaGTGGGCTGCAGGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSWCTCR*WAAGGC
Trigger: ACAACCTCCTGCAGCCCATCATCGACACGTGCACCA...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCTTCATCACGTTGGGTTaGAAAGTTGGAAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVFITLG*KVGRFC
Trigger: GCAAAATCTTCCAACTTTTCAACCCAACGTGATGAA...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTAGCCGGGCGATCTTCTaGTGCTTGTCTTCCTCCACG +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSSRAIF*CLSSST
Trigger: CGTGGAGGAAGACAAGCAGCAGAAGATCGCCCGGCT...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGGGGCCGAAGTCAGGGTaGTGGGGTCCAGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKGPKSG*WGPAQG
Trigger: GCCTTGGGCTGGACCCCAGCACCCTGACTTCGGCCC...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTCTCGACTCTTGGATCTaGTCCGAGACCTCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSLDSWI*SETSRV
Trigger: GACCCTCGAGGTCTCGGAGCAGATCCAAGAGTCGAG...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCCATCTGCGGCATCTaGAGCTGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSSICGI*SCCCCC
Trigger: ACAGCAGCAGCAGCAGCTCCAGATGCCGCAGATGGA...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTAAAAGGAAAACGAGCCTaGGGCCCTGGTGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLKGKRA*GPGGCS
Trigger: GCTGCAGCCACCAGGGCCCCAGGCTCGTTTTCCTTT...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTCCATCCCTTCGTGGCTaGAGAATTTACTCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSPSLRG*RIYSGG
Trigger: TCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGG...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTACGGCCAAGAAGCTGGTaGAGTAGATGGGCACCACGA +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLRPRSW*SRWAPR
Trigger: TCGTGGTGCCCATCTACTGCACCAGCTTCTTGGCCG...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTAACCCTTCCTGCACATaGTCCTCCTGGAGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSNPSCT*SSWSLG
Trigger: TCCTAGGCTCCAGGAGGAGCATGTGCAGGAAGGGTT...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTACCACGGCCAAGAAGCTaGTGCAGTAGATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLPRPRS*CSRWAP
Trigger: TGGTGCCCATCTACTGCACCAGCTTCTTGGCCGTGG...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGGCGCGGCTCCCGGCATaGGCGCCTACTTACACTCGT +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKARLPA*APTYTR
Trigger: ACGAGTGTAAGTAGGCGCCCATGCCGGGAGCCGCGC...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGGTGCCCTCCACGCCATaGAGCACGGCGTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKVPSTP*STAFPL
Trigger: CAGTGGGAACGCCGTGCTCCATGGCGTGGAGGGCAC...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGCAAGGAGCCACGGGGTaGGGCTGGTCAAACCAAGGG +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKQGATG*GWSNQG
Trigger: CCCTTGGTTTGACCAGCCTCACCCCGTGGCTCCTTG...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTGTGTCGATGATGGGCTaGAGGAGGTTGTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSVSMMG*RRLSNS
Trigger: CGAGTTTGACAACCTCCTGCAGCCCATCATCGACAC...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGCCGCAGCTCGAAGTGTaGCCCATCAGCCGTGATGCG +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKPQLEV*PISRDA
Trigger: CGCATCACGGCTGATGGGGCACACTTCGAGCTGCGG...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGGCAGCTGCAGGATCCTaGACCCCTCCTGGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKAAAGS*TPPGAS
Trigger: CGAAGCTCCAGGAGGGGTCCAGGATCCTGCAGCTGC...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGGCTCCATGCTCTGGATaGGACTGGGCCGTCGCACAC +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKAPCSG*DWAVAH
Trigger: GTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTGAACTGAGCTGTCACTaGAATCTTCCTCTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSELSCH*NLPLPV
Trigger: GACTGGCAGAGGAAGATTGCAGTGACAGCTCAGTTC...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGCAGGCCAACCCTTCCTaGACATGCTCCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKQANPS*TCSSWS
Trigger: GCTCCAGGAGGAGCATGTGCAGGAAGGGTTGGCCTG...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTCAGGGTTCTTCCAAGTaGAAAACTCAAGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSQGSSK*KTQAGD
Trigger: GTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTG...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGAGGGGGCTTGTTTGGTaGGATCTGGTCGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKRGLVW*DLVVWP
Trigger: GGGCCACACGACCAGATCCCACCAAACAAGCCCCCT...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR GCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGCGGCCAAGAAGCTGGTaGAGTAGATGGGCACCACGA +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKRPRSW*SRWAPR
Trigger: TCGTGGTGCCCATCTACTGCACCAGCTTCTTGGCCG...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTAACGAGCCTGAAGACTTaGAGGATCTTGAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLTSLKT*RILSWS
Trigger: GCTCCAACTCAAGATCCTCCAAGTCTTCAGGCTCGT...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGTGGAGGATCTTGAGTTaGAGCGGGAGGAAGAACGCC +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKWRILS*SGRKNA
Trigger: GGCGTTCTTCCTCCCGCTCCAACTCAAGATCCTCCA...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGGGGCTCTGTAGCTGCTaGATGATGGAGTCATCGAAG +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKGLCSC*MMESSK
Trigger: CTTCGATGACTCCATCATTCAGCAGCTACAGAGCCC...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTATGTTTCTGTACAAATaGATGGAATTGCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: FEELGFRISLGLLSGQYSMFLYK*MELHQA
Trigger: AGCCTGGTGCAATTCCATTCATTTGTACAGAAACAT...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR TCA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGTCTGTAGCTGCTGAATaGTGGAGTCATCGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ISTYTTKITELRASTPSKSVAAE*WSHRSS
Trigger: GCTACTTCGATGACTCCATCATTCAGCAGCTACAGA...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 90 bp CTGTTCCAGGCGGCGTCGGGCTGGTTGTTCCAGGGCGCGTCGCGCTaGCCGTTCCAGCCGGGGTCACCGCGCTGCTCGCCCCACATGCCC +
Preference number: 5 (lower is better)
Translates to: LFQAASGWLFQGASR*PFQPGSPRCSPHMP
Trigger: GGGCATGTGGGGCGAGCAGCGCGGTGACCCCGGCTGGAACGGCCAGCGCGACGCGCCCTGGAACAACCAGCCCGACGCCGCCTGGAACAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS-3UTR CAA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGCGGCGTCGGGCTGGTaGTTCCAGGGCGCGTCGCGC +
Preference number: 5 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHAASGW*FQGASR
Trigger: GCGCGACGCGCCCTGGAACAACCAGCCCGACGCCGC...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS TCA 90 bp TTCTGCAGGGCGGCCAGCAGCTCCCGGGCCTGCTTGCGCTGGCTGTaGGGGAGAGACTTTCCGCGCGTCAGGGCCCAGTGGTGCAGCACG +
Preference number: 5 (lower is better)
Translates to: FCRAASSSRACLRWL*GRDFPRVRAQWCST
Trigger: CGTGCTGCACCACTGGGCCCTGACGCGCGGAAAGTCTCTCCCTCACAGCCAGCGCAAGCAGGCCCGGGAGCTGCTGGCCGCCCTGCAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000198939.6
CDS GCA 90 bp GCACCACGACCTTCTGCAGGGCGGCCAGCAGCTCCCGGGCCTGCTTaGGCTGGCTGTGAGGGAGAGACTTTCCGCGCGTCAGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: APRPSAGRPAAPGPA*AGCEGETFRASGPS
Trigger: ACTGGGCCCTGACGCGCGGAAAGTCTCTCCCTCACAGCCAGCGCAAGCAGGCCCGGGAGCTGCTGGCCGCCCTGCAGAAGGTCGTGGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000198939.6
CDS CCA 90 bp CGGCCACCCAGGAGGGTTGAGGAGGAGCGCGAGGAAGTGGCGCTCTaGGCACGGGGTGGCGGCGCTCACCAGTGGTGCAGCACGTCATTG +
Preference number: 5 (lower is better)
Translates to: RPPRRVEEEREEVAL*ARGGGAHQWCSTSL
Trigger: CAATGACGTGCTGCACCACTGGTGAGCGCCGCCACCCCGTGCCCAGAGCGCCACTTCCTCGCGCTCCTCCTCAACCCTCCTGGGTGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS-3UTR CAA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACGGGTGCGGAGGCTGGTaGAACTGCGGGTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KALAGVGLHALDGTGPSHGCGGW*NCGCCW
Trigger: CCAGCAGCACCCGCAGTTCAACCAGCCTCCGCACCC...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS TCA 90 bp GGCCGAAGTCAGGGTGCTGGGGTCCAGCCCAAGGCGGGTGCTCGTTaGTGCCAGGATGAGGCATGCGGTGGCCAGGGTGGTGGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: GRSQGAGVQPKAGAR*CQDEACGGQGGGEG
Trigger: CCCCTCACCACCACCCTGGCCACCGCATGCCTCATCCTGGCATCAACGAGCACCCGCCTTGGGCTGGACCCCAGCACCCTGACTTCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS CCA 90 bp TCTTCCTCTGCCAGTCAGCCAGGAAGGTCCCACAGCCGGCACCGCTaGCCACCGGCGCGGCTCCCGGCATGGGCGCCTACTTACACTCGT +
Preference number: 5 (lower is better)
Translates to: SSSASQPGRSHSRHR*PPARLPAWAPTYTR
Trigger: ACGAGTGTAAGTAGGCGCCCATGCCGGGAGCCGCGCCGGTGGCCAGCGGTGCCGGCTGTGGGACCTTCCTGGCTGACTGGCAGAGGAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000597261.1
CDS-3UTR CAA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCTCAAACTCGGGCCCATaGCGAGCCACGAACTGGGCG +
Preference number: 5 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRSNSGP*RATNWA
Trigger: CGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTTTGA...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACGGTGGAGGCGTGGCCTaGACTTCAGCCTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: KALAGVGLHALDGTGPSHGGGVA*TSASIC
Trigger: GCAGATGGAGGCTGAAGTCAAGGCCACGCCTCCACC...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp GCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTGGGAAGCGGTTGAAGTaGTGGGGGTGCGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: APCSGWDWAVAHASRCRVGKRLK*WGCGGW
Trigger: CCAGCCTCCGCACCCCCACAACTTCAACCGCTTCCC...AACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS TCA 90 bp AGCCCGGACTGGAATCCGAGAAAGGAAGCGCTCGATGGGACGGCCTaGGTGCCGGAGGGGACTCACGCTGCTGCTGCTCCAGCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: SPDWNPRKEALDGTA*VPEGTHAAAAPAPA
Trigger: AGCTGGCGCTGGAGCAGCAGCAGCGTGAGTCCCCTCCGGCACTCAGGCCGTCCCATCGAGCGCTTCCTTTCTCGGATTCCAGTCCGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS GCA 90 bp CACTTATCCCGGACGTCCCCGCCCTTGATGGGGTCCTGGATCCCTTaGTCCTTCGCACCGAGGCCGCCTGAGCCGCTCCAGCCCATCTTC +
Preference number: 5 (lower is better)
Translates to: HLSRTSPPLMGSWIP*SFAPRPPEPLQPIF
Trigger: GAAGATGGGCTGGAGCGGCTCAGGCGGCCTCGGTGCGAAGGAGCAAGGGATCCAGGACCCCATCAAGGGCGGGGACGTCCGGGATAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000597261.1
CDS CCA 90 bp CGCAGCTCGAAGTGTGCCCCATCAGCCGTGATGCGGTTCCGGAGGTaGCCGGCCATCAGCTCACAGTGCGGCGGGGACTTGGCATTGCTG +
Preference number: 5 (lower is better)
Translates to: RSSKCAPSAVMRFRR*PAISSQCGGDLALL
Trigger: CAGCAATGCCAAGTCCCCGCCGCACTGTGAGCTGATGGCCGGCCACCTCCGGAACCGCATCACGGCTGATGGGGCACACTTCGAGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS CCA 90 bp GGCGGTGGAGGCGTGGCCTTGACTTCAGCCTCCATCTGCGGCATCTaGAGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GGGGVALTSASICGI*SCCCCCCCCCCCWA
Trigger: GGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCAGATGGAGGCTGAAGTCAAGGCCACGCCTCCACCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 90 bp TACTGGTCCCACTTATCCCGGACGTCCCCGCCCTTGATGGGGTCCTaGATCCCTTGCTCCTTCGCACCGAGGCCGCCTGAGCCGCTCCAG +
Preference number: 5 (lower is better)
Translates to: YWSHLSRTSPPLMGS*IPCSFAPRPPEPLQ
Trigger: CTGGAGCGGCTCAGGCGGCCTCGGTGCGAAGGAGCAAGGGATCCAGGACCCCATCAAGGGCGGGGACGTCCGGGATAAGTGGGACCAGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000597261.1
CDS-3UTR CAA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTTCCGGGGTCTGCTGCTaGCAGATGAGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRSGVCC*QMSCCC
Trigger: GCAGCAGCAGCTCATCTGCAAGCAGCAGACCCCGGA...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACGCCGAGATGGCGTCCTaGGTGCACGTGTCGATGATG +
Preference number: 5 (lower is better)
Translates to: KALAGVGLHALDGTGPSHAEMAS*VHVSMM
Trigger: CATCATCGACACGTGCACCAAGGACGCCATCTCGGC...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGCGGCGTCGGGCTGGTaGTTCCAGGGCGCGTCGCGC +
Preference number: 5 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRAASGW*FQGASR
Trigger: GCGCGACGCGCCCTGGAACAACCAGCCCGACGCCGC...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTCGGGGCGGGAAGCGGTaGAAGTTGTGGGGGTGCGGA +
Preference number: 5 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSRGGKR*KLWGCG
Trigger: TCCGCACCCCCACAACTTCAACCGCTTCCCGCCCCG...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGGCCTCCTGGTGTGGTTaGTGGGTGGCACCCGTGCCC +
Preference number: 5 (lower is better)
Translates to: GDATGTDSEAALNLKCLRASWCG*WVAPVP
Trigger: GGGCACGGGTGCCACCCACAAACCACACCAGGAGGC...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 90 bp GGCGTGGCCTTGACTTCAGCCTCCATCTGCGGCATCTGGAGCTGCTaGTGCTGCTGTTGCTGCTGCTGCTGCTGCTGGGCCAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GVALTSASICGIWSC*CCCCCCCCCWARLV
Trigger: CACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCAGATGGAGGCTGAAGTCAAGGCCACGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 90 bp GGAGGCGTGGCCTTGACTTCAGCCTCCATCTGCGGCATCTGGAGCTaGTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GGVALTSASICGIWS*CCCCCCCCCCWARL
Trigger: CAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCAGATGGAGGCTGAAGTCAAGGCCACGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 90 bp GGTGGAGCAGGCGGTGGAGGCGTGGCCTTGACTTCAGCCTCCATCTaGGGCATCTGGAGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GGAGGGGVALTSASI*GIWSCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCAGATGGAGGCTGAAGTCAAGGCCACGCCTCCACCGCCTGCTCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACACGCAGCGCGACCTTGACCTaGAGTACGAGCCTGAAGACT +
Preference number: 5 (lower is better)
Translates to: RWLGSGSMLWMGLGRRTRSATLT*STSLKT
Trigger: AGTCTTCAGGCTCGTACTCAAGGTCAAGGTCGCGCT...GCGTGTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGCCTCCTGGTGTGGTTaGTGGGTGGCACCCGTGCCC +
Preference number: 5 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATASWCG*WVAPVP
Trigger: GGGCACGGGTGCCACCCACAAACCACACCAGGAGGC...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS TCA 90 bp GGTGGCCGGCCATCAGCTCACAGTGCGGCGGGGACTTGGCATTGCTaGACATCCAGTTCTTCCCGGCCGAGATGGCGTCCTTGGTGCACG +
Preference number: 5 (lower is better)
Translates to: GGRPSAHSAAGTWHC*TSSSSRPRWRPWCT
Trigger: CGTGCACCAAGGACGCCATCTCGGCCGGGAAGAACTGGATGTTCAGCAATGCCAAGTCCCCGCCGCACTGTGAGCTGATGGCCGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS TCA 90 bp CCACGCCTTTATACTGGTCCCACTTATCCCGGACGTCCCCGCCCTTaGTGGGGTCCTGGATCCCTTGCTCCTTCGCACCGAGGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: PRLYTGPTYPGRPRP*WGPGSLAPSHRGRL
Trigger: CAGGCGGCCTCGGTGCGAAGGAGCAAGGGATCCAGGACCCCATCAAGGGCGGGGACGTCCGGGATAAGTGGGACCAGTATAAAGGCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000597261.1
CDS GCA 90 bp TCAGCCGTGATGCGGTTCCGGAGGTGGCCGGCCATCAGCTCACAGTaGGGCGGGGACTTGGCATTGCTGAACATCCAGTTCTTCCCGGCC +
Preference number: 5 (lower is better)
Translates to: SAVMRFRRWPAISSQ*GGDLALLNIQFFPA
Trigger: GGCCGGGAAGAACTGGATGTTCAGCAATGCCAAGTCCCCGCCGCACTGTGAGCTGATGGCCGGCCACCTCCGGAACCGCATCACGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS CCA 90 bp TCTGCTGCTTGTCTTCCTCCACGGCCAAGAAGCTGGTGCAGTAGATaGGCACCACGACCTTCTGCAGGGCGGCCAGCAGCTCCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: SAACLPPRPRSWCSR*APRPSAGRPAAPGP
Trigger: AGGCCCGGGAGCTGCTGGCCGCCCTGCAGAAGGTCGTGGTGCCCATCTACTGCACCAGCTTCTTGGCCGTGGAGGAAGACAAGCAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 90 bp TTTGTGGCAGAGCCCGGACTGGAATCCGAGAAAGGAAGCGCTCGATaGGACGGCCTGAGTGCCGGAGGGGACTCACGCTGCTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FVAEPGLESEKGSAR*DGLSAGGDSRCCCS
Trigger: GGAGCAGCAGCAGCGTGAGTCCCCTCCGGCACTCAGGCCGTCCCATCGAGCGCTTCCTTTCTCGGATTCCAGTCCGGGCTCTGCCACAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS-3UTR CAA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTGGTGGAGGCGTGGCCTaGACTTCAGCCTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: QAGDATGTDSEAALNLKCGGGVA*TSASIC
Trigger: GCAGATGGAGGCTGAAGTCAAGGCCACGCCTCCACC...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACTTGGAGGATCTTGAGTaGGAGCGGGAGGAAGAACGC +
Preference number: 5 (lower is better)
Translates to: KALAGVGLHALDGTGPSHLEDLE*EREEER
Trigger: GCGTTCTTCCTCCCGCTCCAACTCAAGATCCTCCAA...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCCACTGGGCTTCGGCTTaGTCCCTACACAGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLHWASA*SLHSRG
Trigger: CCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTG...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp GGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAAGCTCCCGGGCCTGCTaGCGCTGGCAGTGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: GFFQVQNSSRGRDGHRLRSSRAC*RWQWCS
Trigger: GCTGCACCACTGCCAGCGCAAGCAGGCCCGGGAGCT...TCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546361.7
CDS GCA 90 bp TGCGGCATCTGGAGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTaGTGGGCCAGGCTGGTGACAAACTCCTCGTGCTGCGTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: CGIWSCCCCCCCCCC*WARLVTNSSCCVLR
Trigger: CCTCAAGACGCAGCACGAGGAGTTTGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 90 bp TCCATCTGCGGCATCTGGAGCTGCTGCTGCTGCTGTTGCTGCTGCTaGTGCTGCTGGGCCAGGCTGGTGACAAACTCCTCGTGCTGCGTC +
Preference number: 5 (lower is better)
Translates to: SICGIWSCCCCCCCC*CCWARLVTNSSCCV
Trigger: GACGCAGCACGAGGAGTTTGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCAGATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 90 bp GCCGGGCGATCTTCTGCTGCTTGTCTTCCTCCACGGCCAAGAAGCTaGTGCAGTAGATGGGCACCACGACCTTCTGCAGGGCGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: AGRSSAACLPPRPRS*CSRWAPRPSAGRPA
Trigger: TGCTGGCCGCCCTGCAGAAGGTCGTGGTGCCCATCTACTGCACCAGCTTCTTGGCCGTGGAGGAAGACAAGCAGCAGAAGATCGCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 90 bp GGCATCTGGAGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTaGGCCAGGCTGGTGACAAACTCCTCGTGCTGCGTCTTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: GIWSCCCCCCCCCCC*ARLVTNSSCCVLRV
Trigger: GACCCTCAAGACGCAGCACGAGGAGTTTGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 90 bp GGACCCCTCCTGGAGCTTCGTACTCTGAAGAGCCAGGCATCTGGATaGGAGGCTTGCTGTCATCAGGCTGGGTGGTGGGCGGGATGGCAG +
Preference number: 5 (lower is better)
Translates to: GPLLELRTLKSQASG*EACCHQAGWWAGWQ
Trigger: CTGCCATCCCGCCCACCACCCAGCCTGATGACAGCAAGCCTCCCATCCAGATGCCTGGCTCTTCAGAGTACGAAGCTCCAGGAGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 90 bp CACGAACTGGGCGAGCTTGTCGATGACATTTCGAAGCTCCTGGTCTaGAGGACGGAGAAAAGGCCACGCGGGGCGTCAGCGAGGACCGCC +
Preference number: 5 (lower is better)
Translates to: HELGELVDDISKLLV*RTEKRPRGASARTA
Trigger: GGCGGTCCTCGCTGACGCCCCGCGTGGCCTTTTCTCCGTCCTCCAGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS-3UTR CAA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAACAGTGCGGCGGGGACTaGGCATTGCTGAACATCCAG +
Preference number: 5 (lower is better)
Translates to: RGQSWHWASALSLHSRGEQCGGD*ALLNIQ
Trigger: CTGGATGTTCAGCAATGCCAAGTCCCCGCCGCACTG...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGGAAGCGGTTGAAGTaGTGGGGGTGCGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRGKRLK*WGCGGW
Trigger: CCAGCCTCCGCACCCCCACAACTTCAACCGCTTCCC...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGCTGGGGTCATCGTGGTaGATGTGGGGTGGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATLGSSW*MWGGPC
Trigger: ACAGGGCCCACCCCACATCAACCACGATGACCCCAG...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp GGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTCTTAGGGAACGCCCTCGACTCTaGGATCTGCTCCGAGACCTC +
Preference number: 5 (lower is better)
Translates to: GDATGTDSEAALNLKCLRERPRL*DLLRDL
Trigger: GAGGTCTCGGAGCAGATCCAAGAGTCGAGGGCGTTC...CCTAAGACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS TCA 90 bp GCCGGCAGCTGCAGGATCCTGGACCCCTCCTGGAGCTTCGTACTCTaGAGAGCCAGGCATCTGGATGGGAGGCTTGCTGTCATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: AGSCRILDPSWSFVL*RARHLDGRLAVIRL
Trigger: CAGCCTGATGACAGCAAGCCTCCCATCCAGATGCCTGGCTCTTCAGAGTACGAAGCTCCAGGAGGGGTCCAGGATCCTGCAGCTGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 90 bp GCCGCTGTCACTTGCTCCTGTCTGAGCGCCAGCAAGTGCTGCTCCTaGTGCTGGAGGTTCCACTGGCTCTGCTGGATGAGCTCGTCCATG +
Preference number: 5 (lower is better)
Translates to: AAVTCSCLSASKCCS*CWRFHWLCWMSSSM
Trigger: CATGGACGAGCTCATCCAGCAGAGCCAGTGGAACCTCCAGCAGCAGGAGCAGCACTTGCTGGCGCTCAGACAGGAGCAAGTGACAGCGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS GCA 90 bp CACGTCATTGATCAGGTAGATGAGGTGCAGCCGCAGCTCGAAGTGTaGCCCATCAGCCGTGATGCGGTTCCGGAGGTGGCCGGCCATCAG +
Preference number: 5 (lower is better)
Translates to: HVIDQVDEVQPQLEV*PISRDAVPEVAGHQ
Trigger: CTGATGGCCGGCCACCTCCGGAACCGCATCACGGCTGATGGGGCACACTTCGAGCTGCGGCTGCACCTCATCTACCTGATCAATGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS GCA 90 bp GGGCGATCTTCTGCTGCTTGTCTTCCTCCACGGCCAAGAAGCTGGTaGAGTAGATGGGCACCACGACCTTCTGCAGGGCGGCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: GRSSAACLPPRPRSW*SRWAPRPSAGRPAA
Trigger: AGCTGCTGGCCGCCCTGCAGAAGGTCGTGGTGCCCATCTACTGCACCAGCTTCTTGGCCGTGGAGGAAGACAAGCAGCAGAAGATCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 90 bp TCGTGCTGCGTCTTGAGGGTCTGGATCTGCTGCTGGAAGGCCAGCTaGACCGGCTGGACCACTGAGGAGTACTCGTTGATGAGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SCCVLRVWICCWKAS*TGWTTEEYSLMRVA
Trigger: GGCCACCCTCATCAACGAGTACTCCTCAGTGGTCCAGCCGGTGCAGCTGGCCTTCCAGCAGCAGATCCAGACCCTCAAGACGCAGCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 90 bp ATCTGCGGCATCTGGAGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTaGTGCTGGGCCAGGCTGGTGACAAACTCCTCGTGCTGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: ICGIWSCCCCCCCCC*CWARLVTNSSCCVL
Trigger: CAAGACGCAGCACGAGGAGTTTGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 90 bp TCCTGGACCCCTCCTGGAGCTTCGTACTCTGAAGAGCCAGGCATCTaGATGGGAGGCTTGCTGTCATCAGGCTGGGTGGTGGGCGGGATG +
Preference number: 5 (lower is better)
Translates to: SWTPPGASYSEEPGI*MGGLLSSGWVVGGM
Trigger: CATCCCGCCCACCACCCAGCCTGATGACAGCAAGCCTCCCATCCAGATGCCTGGCTCTTCAGAGTACGAAGCTCCAGGAGGGGTCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 90 bp CGAGCCACGAACTGGGCGAGCTTGTCGATGACATTTCGAAGCTCCTaGTCTGGAGGACGGAGAAAAGGCCACGCGGGGCGTCAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: RATNWASLSMTFRSS*SGGRRKGHAGRQRG
Trigger: TCCTCGCTGACGCCCCGCGTGGCCTTTTCTCCGTCCTCCAGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS CCA 90 bp GTTCTCCATTACAGTGGCACCCAGCAGCCGCTCTGTGCAGGGCCGTaGGAACAGCGGAACAGGGATCGTGTGGACCGAGCTGCTCCACTT +
Preference number: 5 (lower is better)
Translates to: VLHYSGTQQPLCAGP*EQRNRDRVDRAAPL
Trigger: AAGTGGAGCAGCTCGGTCCACACGATCCCTGTTCCGCTGTTCCCACGGCCCTGCACAGAGCGGCTGCTGGGTGCCACTGTAATGGAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CCA 90 bp CCAGAGTTACCAGCGCAGCACTTAAGACAGGATCTTACGGCGGGGTaGGGCTCCTGGACCGTGACCGGCGTCTTCTTCCTGGGGAGTACG +
Preference number: 5 (lower is better)
Translates to: PELPAQHLRQDLTAG*GSWTVTGVFFLGST
Trigger: CGTACTCCCCAGGAAGAAGACGCCGGTCACGGTCCAGGAGCCCCACCCCGCCGTAAGATCCTGTCTTAAGTGCTGCGCTGGTAACTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600432.1
CDS-3UTR CAA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGTCCGGGGTCTGCTGCTaGCAGATGAGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRSGVCC*QMSCCC
Trigger: GCAGCAGCAGCTCATCTGCAAGCAGCAGACCCCGGA...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCATCTGGATGGGAGGCTaGCTGTCATCAGGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLIWMGG*LSSGWV
Trigger: CACCCAGCCTGATGACAGCAAGCCTCCCATCCAGAT...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGCTGGGGTCATCGTGGTaGATGTGGGGTGGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRLGSSW*MWGGPC
Trigger: ACAGGGCCCACCCCACATCAACCACGATGACCCCAG...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACGGCGTAAGACTTGGAGGATCTaGAGTTGGAGCGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PGVVCGWHPCPPRHGARRKTWRI*SWSGRK
Trigger: CTTCCTCCCGCTCCAACTCAAGATCCTCCAAGTCTT...ACGCCGTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS TCA 90 bp GTGACGAGGGCAGGAGACAGACACAGAGGCCAAGGAGGCCGTGGCTaGGAAGGCAACAAGGAGACGCCAAGAAGCTGCCCCATGAGAGGA +
Preference number: 5 (lower is better)
Translates to: VTRAGDRHRGQGGRG*EGNKETPRSCPMRG
Trigger: TCCTCTCATGGGGCAGCTTCTTGGCGTCTCCTTGTTGCCTTCTCAGCCACGGCCTCCTTGGCCTCTGTGTCTGTCTCCTGCCCTCGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS GCA 90 bp TCGTTCATGTCTAGCTGGGTCTCCTCCAGAAGCTTCTGCATCTGCTaGTCCACCGCGTGGGCCACGGCCGCTGTCACTTGCTCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: SFMSSWVSSRSFCIC*STAWATAAVTCSCL
Trigger: CAGACAGGAGCAAGTGACAGCGGCCGTGGCCCACGCGGTGGAGCAGCAGATGCAGAAGCTTCTGGAGGAGACCCAGCTAGACATGAACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS GCA 90 bp AAACCTCGTTGTTCTCCATTACAGTGGCACCCAGCAGCCGCTCTGTaGAGGGCCGTGGGAACAGCGGAACAGGGATCGTGTGGACCGAGC +
Preference number: 5 (lower is better)
Translates to: KPRCSPLQWHPAAAL*RAVGTAEQGSCGPS
Trigger: GCTCGGTCCACACGATCCCTGTTCCGCTGTTCCCACGGCCCTGCACAGAGCGGCTGCTGGGTGCCACTGTAATGGAGAACAACGAGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CCA 90 bp GTCACTTGCTCCTGTCTGAGCGCCAGCAAGTGCTGCTCCTGCTGCTaGAGGTTCCACTGGCTCTGCTGGATGAGCTCGTCCATGGATGGC +
Preference number: 5 (lower is better)
Translates to: VTCSCLSASKCCSCC*RFHWLCWMSSSMDG
Trigger: GCCATCCATGGACGAGCTCATCCAGCAGAGCCAGTGGAACCTCCAGCAGCAGGAGCAGCACTTGCTGGCGCTCAGACAGGAGCAAGTGAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS-3UTR CAA 90 bp AATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGCGATCTTCTGCTGCTaGTCTTCCTCCACGGCCAAG +
Preference number: 5 (lower is better)
Translates to: NPRAVMALGFGFVPTQPRAIFCC*SSSTAK
Trigger: CTTGGCCGTGGAGGAAGACAAGCAGCAGAAGATCGC...CCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGCGATCTTCTGCTGCTaGTCTTCCTCCACGGCCAAG +
Preference number: 5 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPAIFCC*SSSTAK
Trigger: CTTGGCCGTGGAGGAAGACAAGCAGCAGAAGATCGC...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGATCTGGATGGGAGGCTaGCTGTCATCAGGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATIWMGG*LSSGWV
Trigger: CACCCAGCCTGATGACAGCAAGCCTCCCATCCAGAT...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGACCAAGGGGGCTTGTTaGGTGGGATCTGGTCGTGTG +
Preference number: 5 (lower is better)
Translates to: KTQAGDATGTDSEAALNLTKGAC*VGSGRV
Trigger: CACACGACCAGATCCCACCAAACAAGCCCCCTTGGT...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTTCAAACCAAGGGGGCTaGTTTGGTGGGATCTGGTCG +
Preference number: 5 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSSNQGG*FGGIWS
Trigger: CGACCAGATCCCACCAAACAAGCCCCCTTGGTTTGA...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGAAGTGTGCCGGGCCCGCATTTTaGCTCGGAAGAACTCATAGA +
Preference number: 5 (lower is better)
Translates to: QAGDATGTDSEAALNLKCAGPAF*LGRTHR
Trigger: TCTATGAGTTCTTCCGAGCAAAAATGCGGGCCCGGC...ACACTTCAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCGCCGGGCCCGCATTTTaGCTCGGAAGAACTCATAGA +
Preference number: 5 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLAGPAF*LGRTHR
Trigger: TCTATGAGTTCTTCCGAGCAAAAATGCGGGCCCGGC...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGAGCAGGAGCGCGACCTaGACCTTGAGTACGAGCCTG +
Preference number: 5 (lower is better)
Translates to: PSHTPAGAGFFQVQNSSRSRSAT*TLSTSL
Trigger: CAGGCTCGTACTCAAGGTCAAGGTCGCGCTCCTGCT...CCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACACGGACGTCCCCGCCCTaGATGGGGTCCTGGATCCCT +
Preference number: 5 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTRTSPP*MGSWIP
Trigger: AGGGATCCAGGACCCCATCAAGGGCGGGGACGTCCG...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 90 bp AACTCGTTCATGTCTAGCTGGGTCTCCTCCAGAAGCTTCTGCATCTaGTGCTCCACCGCGTGGGCCACGGCCGCTGTCACTTGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: NSFMSSWVSSRSFCI*CSTAWATAAVTCSC
Trigger: ACAGGAGCAAGTGACAGCGGCCGTGGCCCACGCGGTGGAGCAGCAGATGCAGAAGCTTCTGGAGGAGACCCAGCTAGACATGAACGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS-3UTR CAA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTTCAAACCAAGGGGGCTaGTTTGGTGGGATCTGGTCG +
Preference number: 5 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPSNQGG*FGGIWS
Trigger: CGACCAGATCCCACCAAACAAGCCCCCTTGGTTTGA...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp AAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTGTTGGAGGATCTTGAGTaGGAGCGGGAGGAAGAACGC +
Preference number: 5 (lower is better)
Translates to: KTQAGDATGTDSEAALNLLEDLE*EREEER
Trigger: GCGTTCTTCCTCCCGCTCCAACTCAAGATCCTCCAA...CAGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCGGACGTCCCCGCCCTaGATGGGGTCCTGGATCCCT +
Preference number: 5 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVRTSPP*MGSWIP
Trigger: AGGGATCCAGGACCCCATCAAGGGCGGGGACGTCCG...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS TCA 90 bp CAAACTCGGGCCCATTGCGAGCCACGAACTGGGCGAGCTTGTCGATaGCATTTCGAAGCTCCTGGTCTGGAGGACGGAGAAAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: QTRAHCEPRTGRACR*HFEAPGLEDGEKAT
Trigger: CGTGGCCTTTTCTCCGTCCTCCAGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS GCA 90 bp TTCCCGGCCGAGATGGCGTCCTTGGTGCACGTGTCGATGATGGGCTaGAGGAGGTTGTCAAACTCGTTCATGTCTAGCTGGGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FPAEMASLVHVSMMG*RRLSNSFMSSWVSS
Trigger: GGAGGAGACCCAGCTAGACATGAACGAGTTTGACAACCTCCTGCAGCCCATCATCGACACGTGCACCAAGGACGCCATCTCGGCCGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS GCA 90 bp ATCTTGAGTTGGAGCGGGAGGAAGAACGCCCTCGACTCTTGGATCTaGTCCGAGACCTCGAGGGTCCGCTGTTCCTCTTCTCCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: ILSWSGRKNALDSWI*SETSRVRCSSSPGL
Trigger: AAGGCCAGGAGAAGAGGAACAGCGGACCCTCGAGGTCTCGGAGCAGATCCAAGAGTCGAGGGCGTTCTTCCTCCCGCTCCAACTCAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000600432.1
CDS GCA 90 bp AGGAGGGTCCTGATGGCTGAGCAAAGTCAGGTGACCGCGTGTGTGTaGGTGCAAATCAGTGACGAGGGCAGGAGACAGACACAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: RRVLMAEQSQVTACV*VQISDEGRRQTQRP
Trigger: TGGCCTCTGTGTCTGTCTCCTGCCCTCGTCACTGATTTGCACGCACACACACGCGGTCACCTGACTTTGCTCAGCCATCAGGACCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS CCA 90 bp TGGAGGATCTTGAGTTGGAGCGGGAGGAAGAACGCCCTCGACTCTTaGATCTGCTCCGAGACCTCGAGGGTCCGCTGTTCCTCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: WRILSWSGRKNALDS*ICSETSRVRCSSSP
Trigger: AGGAGAAGAGGAACAGCGGACCCTCGAGGTCTCGGAGCAGATCCAAGAGTCGAGGGCGTTCTTCCTCCCGCTCCAACTCAAGATCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000600432.1
CDS CCA 90 bp GGGAGCAGGAGCGCGACCTTGACCTTGAGTACGAGCCTGAAGACTTaGAGGATCTTGAGTTGGAGCGGGAGGAAGAACGCCCTCGACTCT +
Preference number: 5 (lower is better)
Translates to: GSRSATLTLSTSLKT*RILSWSGRKNALDS
Trigger: AGAGTCGAGGGCGTTCTTCCTCCCGCTCCAACTCAAGATCCTCCAAGTCTTCAGGCTCGTACTCAAGGTCAAGGTCGCGCTCCTGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000600432.1
CDS CCA 90 bp ATGCACAAAACCTTGCTGGACCCACAGGGAGACGGCAAAGGGGGCTaGACAGTGCCTGTCCCATGGACTCCCATCCGGCCTCTATCACTT +
Preference number: 5 (lower is better)
Translates to: MHKTLLDPQGDGKGG*TVPVPWTPIRPLSL
Trigger: AAGTGATAGAGGCCGGATGGGAGTCCATGGGACAGGCACTGTCCAGCCCCCTTTGCCGTCTCCCTGTGGGTCCAGCAAGGTTTTGTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS-3UTR CAA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTACGAACTGGGCGAGCTaGTCGATGACATTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPTNWAS*SMTFRS
Trigger: GCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGT...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp GTGTTTCTGTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCACGGCCGCTGTCACTaGCTCCTGTCTGAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: VFLFFNPRAVMALGFGFVHGRCH*LLSERQ
Trigger: CTGGCGCTCAGACAGGAGCAAGTGACAGCGGCCGTG...GACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAACAGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTATGGGCTGCAGGAGGTaGTCAAACTCGTTCATGTCT +
Preference number: 5 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSMGCRR*SNSFMS
Trigger: AGACATGAACGAGTTTGACAACCTCCTGCAGCCCAT...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCGCCGAGATGGCGTCCTaGGTGCACGTGTCGATGATG +
Preference number: 5 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVAEMAS*VHVSMM
Trigger: CATCATCGACACGTGCACCAAGGACGCCATCTCGGC...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CAAAACTCAAGCAGGGGACGCGACGGGCACAGACTCCGAGGCAGCGCTCAACCTAAGACTTGGAGGATCTaGAGTTGGAGCGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: QNSSRGRDGHRLRGSAQPKTWRI*SWSGRK
Trigger: CTTCCTCCCGCTCCAACTCAAGATCCTCCAAGTCTT...AGGTTGAGCGCTGCCTCGGAGTCTGTGCCCGTCGCGTCCCCTGCTTGAGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS TCA 90 bp TCCAGTTCTTCCCGGCCGAGATGGCGTCCTTGGTGCACGTGTCGATaGTGGGCTGCAGGAGGTTGTCAAACTCGTTCATGTCTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: SSSSRPRWRPWCTCR*WAAGGCQTRSCLAG
Trigger: CCCAGCTAGACATGAACGAGTTTGACAACCTCCTGCAGCCCATCATCGACACGTGCACCAAGGACGCCATCTCGGCCGGGAAGAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS-3UTR CAA 90 bp GGCAGATGCACATCCATCCCTTCGTGGCTGAAGAATTTACTCGGGCGGAGGGTCACCAAGGGGGCTTGTTaGGTGGGATCTGGTCGTGTG +
Preference number: 5 (lower is better)
Translates to: GRCTSIPSWLKNLLGRRVTKGAC*VGSGRV
Trigger: CACACGACCAGATCCCACCAAACAAGCCCCCTTGGT...GACCCTCCGCCCGAGTAAATTCTTCAGCCACGAAGGGATGGATGTGCATCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CGCCAGCCGGTGCAGGGTTCTTCCAAGTGCAAAACTCAAGCAGGGGACGCGACGTACGAGCCTGAAGACTaGGAGGATCTTGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: RQPVQGSSKCKTQAGDATYEPED*EDLELE
Trigger: CTCCAACTCAAGATCCTCCAAGTCTTCAGGCTCGTA...CGTCGCGTCCCCTGCTTGAGTTTTGCACTTGGAAGAACCCTGCACCGGCTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS TCA 90 bp CCTGGTACTGACCAAGCCCCAGGGCTGGGCTCTGTAGCTGCTGAATaGTGGAGTCATCGAAGTAGCCGTTTTTCTCCCAGAGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: PGTDQAPGLGSVAAE*WSHRSSRFSPRAAG
Trigger: TCCTGCAGCTCTGGGAGAAAAACGGCTACTTCGATGACTCCATCATTCAGCAGCTACAGAGCCCAGCCCTGGGGCTTGGTCAGTACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS TCA 90 bp GCATGGGCGCCTACTTACACTCGTCCCTGGCCTTCATGCGGGCGATaGAGGAGTAGCTCTTGTTCCTGCGGTAGTTCTCATAGGGGTCAT +
Preference number: 5 (lower is better)
Translates to: AWAPTYTRPWPSCGR*RSSSCSCGSSHRGH
Trigger: ATGACCCCTATGAGAACTACCGCAGGAACAAGAGCTACTCCTTCATCGCCCGCATGAAGGCCAGGGACGAGTGTAAGTAGGCGCCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000597261.1
CDS CCA 90 bp ACCCCACGCTCAGCATTGAGAGCAGGACACCTCCAACCCAGATGGTaGTTAGAAAGCAGACCCCAGTTACTGCCTCAGGCTTCGCCAAGT +
Preference number: 5 (lower is better)
Translates to: TPRSALRAGHLQPRW*LESRPQLLPQASPS
Trigger: ACTTGGCGAAGCCTGAGGCAGTAACTGGGGTCTGCTTTCTAACCACCATCTGGGTTGGAGGTGTCCTGCTCTCAATGCTGAGCGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600432.1
CDS-3UTR CAA 90 bp CGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAGCCGAGGGGAAAACGAGAATTTGGGGTaGTCCTTCTGCTTCTCCATA +
Preference number: 5 (lower is better)
Translates to: RGQSWHWASALSLHSRGENENLG*SFCFSI
Trigger: TATGGAGAAGCAGAAGGACAACCCCAAATTCTCGTT...TTCCCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp TCTGGATGGGACTGGGCCGTCGCACACGCCAGCCGGTGCAGGGTTCTTCCAAGTAACGAGAATTTGGGGTaGTCCTTCTGCTTCTCCATA +
Preference number: 5 (lower is better)
Translates to: SGWDWAVAHASRCRVLPSNENLG*SFCFSI
Trigger: TATGGAGAAGCAGAAGGACAACCCCAAATTCTCGTT...ACTTGGAAGAACCCTGCACCGGCTGGCGTGTGCGACGGCCCAGTCCCATCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp AGGCTTCAATCTGACTTAGGGCAGATGCACATCCATCCCTTCGTGGCTGAAGAACACGGCCGCTGTCACTaGCTCCTGTCTGAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: RLQSDLGQMHIHPFVAEEHGRCH*LLSERQ
Trigger: CTGGCGCTCAGACAGGAGCAAGTGACAGCGGCCGTG...TTCTTCAGCCACGAAGGGATGGATGTGCATCTGCCCTAAGTCAGATTGAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp AAGGCGCTGGCTGGGGTCGGGCTCCATGCTCTGGATGGGACTGGGCCGTCGCACCGTTGGGTTGAAAAGTaGGAAGATTTTGCATCTTAT +
Preference number: 5 (lower is better)
Translates to: KALAGVGLHALDGTGPSHRWVEK*EDFASY
Trigger: ATAAGATGCAAAATCTTCCAACTTTTCAACCCAACG...GTGCGACGGCCCAGTCCCATCCAGAGCATGGAGCCCGACCCCAGCCAGCGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 90 bp TCCATAGTCATCTTCTCAAACTCGGGCCCATTGCGAGCCACGAACTaGGCGAGCTTGTCGATGACATTTCGAAGCTCCTGGTCATCGGGG +
Preference number: 5 (lower is better)
Translates to: SIVIFSNSGPLRATN*ASLSMTFRSSWSSG
Trigger: CCCCGATGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTTTGAGAAGATGACTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000551747.1
CDS-3UTR CAA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAACTGAGGAGTACTCGTaGATGAGGGTGGCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTTEEYS*MRVAWY
Trigger: GTACCAGGCCACCCTCATCAACGAGTACTCCTCAGT...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CGCCTCCTGGTGTGGTTTGTGGGTGGCACCCGTGCCCTCCACGCCATGGAGCACATTCATCACGTTGGGTaGAAAAGTTGGAAGATTTTG +
Preference number: 5 (lower is better)
Translates to: RLLVWFVGGTRALHAMEHIHHVG*KSWKIL
Trigger: CAAAATCTTCCAACTTTTCAACCCAACGTGATGAAT...GTGCTCCATGGCGTGGAGGGCACGGGTGCCACCCACAAACCACACCAGGAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 90 bp TGCAGGGCCGTGGGAACAGCGGAACAGGGATCGTGTGGACCGAGCTaGTCCACTTCAAAGAATAAACGACCCGAAAGAAAGAGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: CRAVGTAEQGSCGPS*STSKNKRPERKRFV
Trigger: CACAAACCTCTTTCTTTCGGGTCGTTTATTCTTTGAAGTGGAGCAGCTCGGTCCACACGATCCCTGTTCCGCTGTTCCCACGGCCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CCA 90 bp TCCATAGTCATCTTCTCAAACTCGGGCCCATTGCGAGCCACGAACTaGGCGAGCTTGTCGATGACATTTCGAAGCTCCTGGTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: SIVIFSNSGPLRATN*ASLSMTFRSSWSGG
Trigger: TCCTCCAGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTTTGAGAAGATGACTATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS-3UTR CAA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTCGGGGCGGGAAGCGGTaGAAGTTGTGGGGGTGCGGA +
Preference number: 5 (lower is better)
Translates to: FEELGFRISLGLLSGQYSRGGKR*KLWGCG
Trigger: TCCGCACCCCCACAACTTCAACCGCTTCCCGCCCCG...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 90 bp GCTGCTCCACTTCAAAGAATAAACGACCCGAAAGAAAGAGGTTTGTaGCAGAGCCCGGACTGGAATCCGAGAAAGGAAGCGCTCGATGGG +
Preference number: 5 (lower is better)
Translates to: AAPLQRINDPKERGL*QSPDWNPRKEALDG
Trigger: CCCATCGAGCGCTTCCTTTCTCGGATTCCAGTCCGGGCTCTGCCACAAACCTCTTTCTTTCGGGTCGTTTATTCTTTGAAGTGGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS-3UTR CAA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTAGGGTGCGGAGGCTGGTaGAACTGCGGGTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLGCGGW*NCGCCW
Trigger: CCAGCAGCACCCGCAGTTCAACCAGCCTCCGCACCC...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp CTCCACGCCATGGAGCACGGCGTTCCCACTGGGCATGCGCTGGTCTTCCTTCTCCGTTGGGTTGAAAAGTaGGAAGATTTTGCATCTTAT +
Preference number: 5 (lower is better)
Translates to: LHAMEHGVPTGHALVFLLRWVEK*EDFASY
Trigger: ATAAGATGCAAAATCTTCCAACTTTTCAACCCAACG...GAGAAGGAAGACCAGCGCATGCCCAGTGGGAACGCCGTGCTCCATGGCGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 90 bp AATCTAGAGACGGGGTTGGGTACTGAACGTGACAGATGTGATACCTaGCCTGAGCAGCCGCACCACCTGGTGACTATCCATTATTCAAAG +
Preference number: 5 (lower is better)
Translates to: NLETGLGTERDRCDT*PEQPHHLVTIHYSK
Trigger: CTTTGAATAATGGATAGTCACCAGGTGGTGCGGCTGCTCAGGGCAGGTATCACATCTGTCACGTTCAGTACCCAACCCCGTCTCTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS-3UTR CAA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTCAGTGCGGCGGGGACTaGGCATTGCTGAACATCCAG +
Preference number: 5 (lower is better)
Translates to: FEELGFRISLGLLSGQYSQCGGD*ALLNIQ
Trigger: CTGGATGTTCAGCAATGCCAAGTCCCCGCCGCACTG...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTAAGCAGGAGCGCGACCTaGACCTTGAGTACGAGCCTG +
Preference number: 5 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLSRSAT*TLSTSL
Trigger: CAGGCTCGTACTCAAGGTCAAGGTCGCGCTCCTGCT...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTACTGAGGAGTACTCGTaGATGAGGGTGGCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: FEELGFRISLGLLSGQYSTEEYS*MRVAWY
Trigger: GTACCAGGCCACCCTCATCAACGAGTACTCCTCAGT...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 90 bp GCAGCCGCACCACCTGGTGACTATCCATTATTCAAAGGCCAGCTCTaGTTCCTAACTTTAAACTTCTTTAGAGCAGGACTGGAATCCTGT +
Preference number: 5 (lower is better)
Translates to: AAAPPGDYPLFKGQL*FLTLNFFRAGLESC
Trigger: ACAGGATTCCAGTCCTGCTCTAAAGAAGTTTAAAGTTAGGAAGCAGAGCTGGCCTTTGAATAATGGATAGTCACCAGGTGGTGCGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS-3UTR CAA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTAAGCGCGACCTTGACCTaGAGTACGAGCCTGAAGACT +
Preference number: 5 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLSATLT*STSLKT
Trigger: AGTCTTCAGGCTCGTACTCAAGGTCAAGGTCGCGCT...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGCACTGGGCTTCGGCTTaGTCCCTACACAGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: ISTYTTKITELRASTPSKHWASA*SLHSRG
Trigger: CCCTCGGCTGTGTAGGGACAAAGCCGAAGCCCAGTG...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp GTTTTTCAATCCGCGGGCAGTCATGGCACTGGGCTTCGGCTTTGTCCCTACACAATTCATCACGTTGGGTaGAAAAGTTGGAAGATTTTG +
Preference number: 5 (lower is better)
Translates to: VFQSAGSHGTGLRLCPYTIHHVG*KSWKIL
Trigger: CAAAATCTTCCAACTTTTCAACCCAACGTGATGAAT...TGTGTAGGGACAAAGCCGAAGCCCAGTGCCATGACTGCCCGCGGATTGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp ATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTTCTTTCTAACGAACTGGGCGAGCTaGTCGATGACATTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: IRFQNLTGPPLRSVFFFLTNWAS*SMTFRS
Trigger: GCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGT...TAGAAAGAAGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTATGGGCTGCAGGAGGTaGTCAAACTCGTTCATGTCT +
Preference number: 5 (lower is better)
Translates to: FEELGFRISLGLLSGQYSMGCRR*SNSFMS
Trigger: AGACATGAACGAGTTTGACAACCTCCTGCAGCCCAT...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp ATATCAACTTATACAACTAAAATAACTGAACTAAGGGCCAGTACGCCTTCGAAGTACGAGCCTGAAGACTaGGAGGATCTTGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: ISTYTTKITELRASTPSKYEPED*EDLELE
Trigger: CTCCAACTCAAGATCCTCCAAGTCTTCAGGCTCGTA...CTTCGAAGGCGTACTGGCCCTTAGTTCAGTTATTTTAGTTGTATAAGTTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS-3UTR CAA 90 bp TTCGAAGAATTAGGTTTCAGAATCTCACTGGGCCTCCTCTCAGGTCAGTATTCTAGGGTCTTGTGTTTTTaGCTTCGCTATAAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: FEELGFRISLGLLSGQYSRVLCF*LRYKGK
Trigger: TTTTCCTTTATAGCGAAGCAAAAAACACAAGACCCT...AGAATACTGACCTGAGAGGAGGCCCAGTGAGATTCTGAAACCTAATTCTTCGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 72 bp GCGGCGTCGGGCTGGTTGTTCCAGGGCGCGTCGCGCTaGCCGTTCCAGCCGGGGTCACCGCGCTGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: AASGWLFQGASR*PFQPGSPRCSP
Trigger: GGGCGAGCAGCGCGGTGACCCCGGCTGGAACGGCCAGCGCGACGCGCCCTGGAACAACCAGCCCGACGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS CAA 90 bp TTCCAGGGGCCCTCGAACTGGCTGTTCCAGGCGGCGTCGGGCTGGTaGTTCCAGGGCGCGTCGCGCTGGCCGTTCCAGCCGGGGTCACCG +
Preference number: 6 (lower is better)
Translates to: FQGPSNWLFQAASGW*FQGASRWPFQPGSP
Trigger: CGGTGACCCCGGCTGGAACGGCCAGCGCGACGCGCCCTGGAACAACCAGCCCGACGCCGCCTGGAACAGCCAGTTCGAGGGCCCCTGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS TCA 72 bp GCGGCCAGCAGCTCCCGGGCCTGCTTGCGCTGGCTGTaGGGGAGAGACTTTCCGCGCGTCAGGGCCCAGTGG +
Preference number: 6 (lower is better)
Translates to: AASSSRACLRWL*GRDFPRVRAQW
Trigger: CCACTGGGCCCTGACGCGCGGAAAGTCTCTCCCTCACAGCCAGCGCAAGCAGGCCCGGGAGCTGCTGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000198939.6
CDS CCA 72 bp GGGCCCTCGAACTGGCTGTTCCAGGCGGCGTCGGGCTaGTTGTTCCAGGGCGCGTCGCGCTGGCCGTTCCAG +
Preference number: 6 (lower is better)
Translates to: GPSNWLFQAASG*LFQGASRWPFQ
Trigger: CTGGAACGGCCAGCGCGACGCGCCCTGGAACAACCAGCCCGACGCCGCCTGGAACAGCCAGTTCGAGGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS CAA 72 bp CCCTCGAACTGGCTGTTCCAGGCGGCGTCGGGCTGGTaGTTCCAGGGCGCGTCGCGCTGGCCGTTCCAGCCG +
Preference number: 6 (lower is better)
Translates to: PSNWLFQAASGW*FQGASRWPFQP
Trigger: CGGCTGGAACGGCCAGCGCGACGCGCCCTGGAACAACCAGCCCGACGCCGCCTGGAACAGCCAGTTCGAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS GCA 72 bp GCGTCGCGCTGGCCGTTCCAGCCGGGGTCACCGCGCTaGTCGCCCCACATGCCCTCATGGCTGTTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: ASRWPFQPGSPR*SPHMPSWLLFQ
Trigger: CTGGAACAACAGCCATGAGGGCATGTGGGGCGAGCAGCGCGGTGACCCCGGCTGGAACGGCCAGCGCGACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS GCA 72 bp CGGACGTCCCCGCCCTTGATGGGGTCCTGGATCCCTTaGTCCTTCGCACCGAGGCCGCCTGAGCCGCTCCAG +
Preference number: 6 (lower is better)
Translates to: RTSPPLMGSWIP*SFAPRPPEPLQ
Trigger: CTGGAGCGGCTCAGGCGGCCTCGGTGCGAAGGAGCAAGGGATCCAGGACCCCATCAAGGGCGGGGACGTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000597261.1
CDS CCA 72 bp AGGAGGGTTGAGGAGGAGCGCGAGGAAGTGGCGCTCTaGGCACGGGGTGGCGGCGCTCACCAGTGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: RRVEEEREEVAL*ARGGGAHQWCS
Trigger: GCTGCACCACTGGTGAGCGCCGCCACCCCGTGCCCAGAGCGCCACTTCCTCGCGCTCCTCCTCAACCCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS TCA 72 bp GGTGCAGCCGCAGCTCGAAGTGTGCCCCATCAGCCGTaGTGCGGTTCCGGAGGTGGCCGGCCATCAGCTCAC +
Preference number: 6 (lower is better)
Translates to: GAAAARSVPHQP*CGSGGGRPSAH
Trigger: GTGAGCTGATGGCCGGCCACCTCCGGAACCGCATCACGGCTGATGGGGCACACTTCGAGCTGCGGCTGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS TCA 72 bp CAGGGTGCTGGGGTCCAGCCCAAGGCGGGTGCTCGTTaGTGCCAGGATGAGGCATGCGGTGGCCAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: QGAGVQPKAGAR*CQDEACGGQGG
Trigger: ACCACCCTGGCCACCGCATGCCTCATCCTGGCATCAACGAGCACCCGCCTTGGGCTGGACCCCAGCACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS GCA 72 bp GGCCGCTCGAAGGGGTGCCGTGGCGGGAAGTCGTCCTaGATGAAGCGGGGCGGGAAGCGGTTGAAGTTGTGG +
Preference number: 6 (lower is better)
Translates to: GRSKGCRGGKSS*MKRGGKRLKLW
Trigger: CCACAACTTCAACCGCTTCCCGCCCCGCTTCATGCAGGACGACTTCCCGCCACGGCACCCCTTCGAGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS CCA 72 bp GGCGGGAAGCGGTTGAAGTTGTGGGGGTGCGGAGGCTaGTTGAACTGCGGGTGCTGCTGGTGGGGCGGGAAG +
Preference number: 6 (lower is better)
Translates to: GGKRLKLWGCGG*LNCGCCWWGGK
Trigger: CTTCCCGCCCCACCAGCAGCACCCGCAGTTCAACCAGCCTCCGCACCCCCACAACTTCAACCGCTTCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS CCA 72 bp GGAGGAGCGCGAGGAAGTGGCGCTCTGGGCACGGGGTaGCGGCGCTCACCAGTGGTGCAGCACGTCATTGAT +
Preference number: 6 (lower is better)
Translates to: GGARGSGALGTG*RRSPVVQHVID
Trigger: ATCAATGACGTGCTGCACCACTGGTGAGCGCCGCCACCCCGTGCCCAGAGCGCCACTTCCTCGCGCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS CAA 72 bp AAGCTACCGACCGGAGCAAGCGGCCACCCAGGAGGGTaGAGGAGGAGCGCGAGGAAGTGGCGCTCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: KLPTGASGHPGG*RRSARKWRSGH
Trigger: GTGCCCAGAGCGCCACTTCCTCGCGCTCCTCCTCAACCCTCCTGGGTGGCCGCTTGCTCCGGTCGGTAGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS CAA 90 bp GGCGGGAAGTCGTCCTGCATGAAGCGGGGCGGGAAGCGGTTGAAGTaGTGGGGGTGCGGAGGCTGGTTGAACTGCGGGTGCTGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: GGKSSCMKRGGKRLK*WGCGGWLNCGCCWW
Trigger: CCACCAGCAGCACCCGCAGTTCAACCAGCCTCCGCACCCCCACAACTTCAACCGCTTCCCGCCCCGCTTCATGCAGGACGACTTCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS CAA 90 bp TGCCGTGGCGGGAAGTCGTCCTGCATGAAGCGGGGCGGGAAGCGGTaGAAGTTGTGGGGGTGCGGAGGCTGGTTGAACTGCGGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: CRGGKSSCMKRGGKR*KLWGCGGWLNCGCC
Trigger: GCAGCACCCGCAGTTCAACCAGCCTCCGCACCCCCACAACTTCAACCGCTTCCCGCCCCGCTTCATGCAGGACGACTTCCCGCCACGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS GCA 72 bp ATCCGAGAAAGGAAGCGCTCGATGGGACGGCCTGAGTaGCGGAGGGGACTCACGCTGCTGCTGCTCCAGCGC +
Preference number: 6 (lower is better)
Translates to: IRERKRSMGRPE*RRGLTLLLLQR
Trigger: GCGCTGGAGCAGCAGCAGCGTGAGTCCCCTCCGGCACTCAGGCCGTCCCATCGAGCGCTTCCTTTCTCGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CCA 72 bp AAGTGTGCCCCATCAGCCGTGATGCGGTTCCGGAGGTaGCCGGCCATCAGCTCACAGTGCGGCGGGGACTTG +
Preference number: 6 (lower is better)
Translates to: KCAPSAVMRFRR*PAISSQCGGDL
Trigger: CAAGTCCCCGCCGCACTGTGAGCTGATGGCCGGCCACCTCCGGAACCGCATCACGGCTGATGGGGCACACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS CCA 72 bp CACTTATCCCGGACGTCCCCGCCCTTGATGGGGTCCTaGATCCCTTGCTCCTTCGCACCGAGGCCGCCTGAG +
Preference number: 6 (lower is better)
Translates to: HLSRTSPPLMGS*IPCSFAPRPPE
Trigger: CTCAGGCGGCCTCGGTGCGAAGGAGCAAGGGATCCAGGACCCCATCAAGGGCGGGGACGTCCGGGATAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000597261.1
CDS CCA 72 bp GAGCCCGGACTGGAATCCGAGAAAGGAAGCGCTCGATaGGACGGCCTGAGTGCCGGAGGGGACTCACGCTGC +
Preference number: 6 (lower is better)
Translates to: EPGLESEKGSAR*DGLSAGGDSRC
Trigger: GCAGCGTGAGTCCCCTCCGGCACTCAGGCCGTCCCATCGAGCGCTTCCTTTCTCGGATTCCAGTCCGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CAA 90 bp CGGTTCCGGAGGTGGCCGGCCATCAGCTCACAGTGCGGCGGGGACTaGGCATTGCTGAACATCCAGTTCTTCCCGGCCGAGATGGCGTCC +
Preference number: 6 (lower is better)
Translates to: RFRRWPAISSQCGGD*ALLNIQFFPAEMAS
Trigger: GGACGCCATCTCGGCCGGGAAGAACTGGATGTTCAGCAATGCCAAGTCCCCGCCGCACTGTGAGCTGATGGCCGGCCACCTCCGGAACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS CCA 72 bp TCCTGCATGAAGCGGGGCGGGAAGCGGTTGAAGTTGTaGGGGTGCGGAGGCTGGTTGAACTGCGGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: SCMKRGGKRLKL*GCGGWLNCGCC
Trigger: GCAGCACCCGCAGTTCAACCAGCCTCCGCACCCCCACAACTTCAACCGCTTCCCGCCCCGCTTCATGCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS CAA 72 bp CTCCATCTGCGGCATCTGGAGCTGCTGCTGCTGCTGTaGCTGCTGCTGCTGCTGCTGGGCCAGGCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: LHLRHLELLLLL*LLLLLLGQAGD
Trigger: GTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCAGATGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CAA 72 bp TCGTCCTGCATGAAGCGGGGCGGGAAGCGGTTGAAGTaGTGGGGGTGCGGAGGCTGGTTGAACTGCGGGTGC +
Preference number: 6 (lower is better)
Translates to: SSCMKRGGKRLK*WGCGGWLNCGC
Trigger: GCACCCGCAGTTCAACCAGCCTCCGCACCCCCACAACTTCAACCGCTTCCCGCCCCGCTTCATGCAGGACGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
CDS CAA 90 bp CCCACGCCTTTATACTGGTCCCACTTATCCCGGACGTCCCCGCCCTaGATGGGGTCCTGGATCCCTTGCTCCTTCGCACCGAGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: PTPLYWSHLSRTSPP*MGSWIPCSFAPRPP
Trigger: AGGCGGCCTCGGTGCGAAGGAGCAAGGGATCCAGGACCCCATCAAGGGCGGGGACGTCCGGGATAAGTGGGACCAGTATAAAGGCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000597261.1
CDS TCA 72 bp TGGAATCCGAGAAAGGAAGCGCTCGATGGGACGGCCTaGGTGCCGGAGGGGACTCACGCTGCTGCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: WNPRKEALDGTA*VPEGTHAAAAP
Trigger: TGGAGCAGCAGCAGCGTGAGTCCCCTCCGGCACTCAGGCCGTCCCATCGAGCGCTTCCTTTCTCGGATTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS GCA 72 bp GATCAGGTAGATGAGGTGCAGCCGCAGCTCGAAGTGTaGCCCATCAGCCGTGATGCGGTTCCGGAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: DQVDEVQPQLEV*PISRDAVPEVA
Trigger: GGCCACCTCCGGAACCGCATCACGGCTGATGGGGCACACTTCGAGCTGCGGCTGCACCTCATCTACCTGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS GCA 72 bp GGCATCTGGAGCTGCTGCTGCTGCTGTTGCTGCTGCTaGTGCTGCTGGGCCAGGCTGGTGACAAACTCCTCG +
Preference number: 6 (lower is better)
Translates to: GIWSCCCCCCCC*CCWARLVTNSS
Trigger: CGAGGAGTTTGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 72 bp TGCGGCATCTGGAGCTGCTGCTGCTGCTGTTGCTGCTaGTGCTGCTGCTGGGCCAGGCTGGTGACAAACTCC +
Preference number: 6 (lower is better)
Translates to: CGIWSCCCCCCC*CCCWARLVTNS
Trigger: GGAGTTTGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 72 bp TCCATCTGCGGCATCTGGAGCTGCTGCTGCTGCTGTTaGTGCTGCTGCTGCTGCTGGGCCAGGCTGGTGACA +
Preference number: 6 (lower is better)
Translates to: SICGIWSCCCCC*CCCCCWARLVT
Trigger: TGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCAGATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 72 bp CCAGCGCAGCACTTAAGACAGGATCTTACGGCGGGGTaGGGCTCCTGGACCGTGACCGGCGTCTTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: PAQHLRQDLTAG*GSWTVTGVFFL
Trigger: CAGGAAGAAGACGCCGGTCACGGTCCAGGAGCCCCACCCCGCCGTAAGATCCTGTCTTAAGTGCTGCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600432.1
CDS CAA 72 bp AGGTGGCCGGCCATCAGCTCACAGTGCGGCGGGGACTaGGCATTGCTGAACATCCAGTTCTTCCCGGCCGAG +
Preference number: 6 (lower is better)
Translates to: RWPAISSQCGGD*ALLNIQFFPAE
Trigger: CTCGGCCGGGAAGAACTGGATGTTCAGCAATGCCAAGTCCCCGCCGCACTGTGAGCTGATGGCCGGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS GCA 72 bp ATGTCTAGCTGGGTCTCCTCCAGAAGCTTCTGCATCTaGTGCTCCACCGCGTGGGCCACGGCCGCTGTCACT +
Preference number: 6 (lower is better)
Translates to: MSSWVSSRSFCI*CSTAWATAAVT
Trigger: AGTGACAGCGGCCGTGGCCCACGCGGTGGAGCAGCAGATGCAGAAGCTTCTGGAGGAGACCCAGCTAGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS GCA 72 bp ATGCGGTTCCGGAGGTGGCCGGCCATCAGCTCACAGTaGGGCGGGGACTTGGCATTGCTGAACATCCAGTTC +
Preference number: 6 (lower is better)
Translates to: MRFRRWPAISSQ*GGDLALLNIQF
Trigger: GAACTGGATGTTCAGCAATGCCAAGTCCCCGCCGCACTGTGAGCTGATGGCCGGCCACCTCCGGAACCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS GCA 72 bp TGCTGCTGGGCCAGGCTGGTGACAAACTCCTCGTGCTaGGTCTTGAGGGTCTGGATCTGCTGCTGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: CCWARLVTNSSC*VLRVWICCWKA
Trigger: GGCCTTCCAGCAGCAGATCCAGACCCTCAAGACGCAGCACGAGGAGTTTGTCACCAGCCTGGCCCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 72 bp ATCTGGAGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTaGTGCTGGGCCAGGCTGGTGACAAACTCCTCGTGC +
Preference number: 6 (lower is better)
Translates to: IWSCCCCCCCCC*CWARLVTNSSC
Trigger: GCACGAGGAGTTTGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 72 bp ATCTGCGGCATCTGGAGCTGCTGCTGCTGCTGTTGCTaGTGCTGCTGCTGCTGGGCCAGGCTGGTGACAAAC +
Preference number: 6 (lower is better)
Translates to: ICGIWSCCCCCC*CCCCWARLVTN
Trigger: GTTTGTCACCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 72 bp TTGACTTCAGCCTCCATCTGCGGCATCTGGAGCTGCTaGTGCTGCTGTTGCTGCTGCTGCTGCTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LTSASICGIWSC*CCCCCCCCCWA
Trigger: GGCCCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCTCCAGATGCCGCAGATGGAGGCTGAAGTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 72 bp CGTACTCTGAAGAGCCAGGCATCTGGATGGGAGGCTTaGTGTCATCAGGCTGGGTGGTGGGCGGGATGGCAG +
Preference number: 6 (lower is better)
Translates to: RTLKSQASGWEA*CHQAGWWAGWQ
Trigger: CTGCCATCCCGCCCACCACCCAGCCTGATGACAGCAAGCCTCCCATCCAGATGCCTGGCTCTTCAGAGTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 72 bp TCCTGTCTGAGCGCCAGCAAGTGCTGCTCCTGCTGCTaGAGGTTCCACTGGCTCTGCTGGATGAGCTCGTCC +
Preference number: 6 (lower is better)
Translates to: SCLSASKCCSCC*RFHWLCWMSSS
Trigger: GGACGAGCTCATCCAGCAGAGCCAGTGGAACCTCCAGCAGCAGGAGCAGCACTTGCTGGCGCTCAGACAGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS CCA 72 bp TGTCTTCCTCCACGGCCAAGAAGCTGGTGCAGTAGATaGGCACCACGACCTTCTGCAGGGCGGCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: CLPPRPRSWCSR*APRPSAGRPAA
Trigger: AGCTGCTGGCCGCCCTGCAGAAGGTCGTGGTGCCCATCTACTGCACCAGCTTCTTGGCCGTGGAGGAAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 72 bp GGCGAGCTTGTCGATGACATTTCGAAGCTCCTGGTCTaGAGGACGGAGAAAAGGCCACGCGGGGCGTCAGCG +
Preference number: 6 (lower is better)
Translates to: GELVDDISKLLV*RTEKRPRGASA
Trigger: CGCTGACGCCCCGCGTGGCCTTTTCTCCGTCCTCCAGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS TCA 72 bp CCATCAGCTCACAGTGCGGCGGGGACTTGGCATTGCTaGACATCCAGTTCTTCCCGGCCGAGATGGCGTCCT +
Preference number: 6 (lower is better)
Translates to: PSAHSAAGTWHC*TSSSSRPRWRP
Trigger: AGGACGCCATCTCGGCCGGGAAGAACTGGATGTTCAGCAATGCCAAGTCCCCGCCGCACTGTGAGCTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS TCA 72 bp TATACTGGTCCCACTTATCCCGGACGTCCCCGCCCTTaGTGGGGTCCTGGATCCCTTGCTCCTTCGCACCGA +
Preference number: 6 (lower is better)
Translates to: YTGPTYPGRPRP*WGPGSLAPSHR
Trigger: TCGGTGCGAAGGAGCAAGGGATCCAGGACCCCATCAAGGGCGGGGACGTCCGGGATAAGTGGGACCAGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000597261.1
CDS TCA 72 bp GTTACTGCCTCAGGCTTCGCCAAGTGGCTACTGTGGTaGAGGGTGAGGGGTGCCACTGTCCCCGGGCTAATG +
Preference number: 6 (lower is better)
Translates to: VTASGFAKWLLW*RVRGATVPGLM
Trigger: CATTAGCCCGGGGACAGTGGCACCCCTCACCCTTCACCACAGTAGCCACTTGGCGAAGCCTGAGGCAGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600432.1
CDS GCA 72 bp TCTGCTGCTTGTCTTCCTCCACGGCCAAGAAGCTGGTaGAGTAGATGGGCACCACGACCTTCTGCAGGGCGG +
Preference number: 6 (lower is better)
Translates to: SAACLPPRPRSW*SRWAPRPSAGR
Trigger: CCGCCCTGCAGAAGGTCGTGGTGCCCATCTACTGCACCAGCTTCTTGGCCGTGGAGGAAGACAAGCAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 72 bp TTCTCCCAGAGCTGCAGGAGCCGGGCGATCTTCTGCTaGTTGTCTTCCTCCACGGCCAAGAAGCTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: FSQSCRSRAIFC*LSSSTAKKLVQ
Trigger: CTGCACCAGCTTCTTGGCCGTGGAGGAAGACAAGCAGCAGAAGATCGCCCGGCTCCTGCAGCTCTGGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS GCA 72 bp TGGAGCGGGAGGAAGAACGCCCTCGACTCTTGGATCTaGTCCGAGACCTCGAGGGTCCGCTGTTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: WSGRKNALDSWI*SETSRVRCSSS
Trigger: AGAAGAGGAACAGCGGACCCTCGAGGTCTCGGAGCAGATCCAAGAGTCGAGGGCGTTCTTCCTCCCGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000600432.1
CDS GCA 72 bp TGTTCTCCATTACAGTGGCACCCAGCAGCCGCTCTGTaGAGGGCCGTGGGAACAGCGGAACAGGGATCGTGT +
Preference number: 6 (lower is better)
Translates to: CSPLQWHPAAAL*RAVGTAEQGSC
Trigger: ACACGATCCCTGTTCCGCTGTTCCCACGGCCCTGCACAGAGCGGCTGCTGGGTGCCACTGTAATGGAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CCA 72 bp CTGGAGCTTCGTACTCTGAAGAGCCAGGCATCTGGATaGGAGGCTTGCTGTCATCAGGCTGGGTGGTGGGCG +
Preference number: 6 (lower is better)
Translates to: LELRTLKSQASG*EACCHQAGWWA
Trigger: CGCCCACCACCCAGCCTGATGACAGCAAGCCTCCCATCCAGATGCCTGGCTCTTCAGAGTACGAAGCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CAA 72 bp TCGTACTCTGAAGAGCCAGGCATCTGGATGGGAGGCTaGCTGTCATCAGGCTGGGTGGTGGGCGGGATGGCA +
Preference number: 6 (lower is better)
Translates to: SYSEEPGIWMGG*LSSGWVVGGMA
Trigger: TGCCATCCCGCCCACCACCCAGCCTGATGACAGCAAGCCTCCCATCCAGATGCCTGGCTCTTCAGAGTACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CAA 72 bp CTTGAGTTGGAGCGGGAGGAAGAACGCCCTCGACTCTaGGATCTGCTCCGAGACCTCGAGGGTCCGCTGTTC +
Preference number: 6 (lower is better)
Translates to: LELEREEERPRL*DLLRDLEGPLF
Trigger: GAACAGCGGACCCTCGAGGTCTCGGAGCAGATCCAAGAGTCGAGGGCGTTCTTCCTCCCGCTCCAACTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000600432.1
CDS CAA 72 bp TTATACTGGTCCCACTTATCCCGGACGTCCCCGCCCTaGATGGGGTCCTGGATCCCTTGCTCCTTCGCACCG +
Preference number: 6 (lower is better)
Translates to: LYWSHLSRTSPP*MGSWIPCSFAP
Trigger: CGGTGCGAAGGAGCAAGGGATCCAGGACCCCATCAAGGGCGGGGACGTCCGGGATAAGTGGGACCAGTATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000597261.1
CDS GCA 72 bp GTCTTGAGGGTCTGGATCTGCTGCTGGAAGGCCAGCTaGACCGGCTGGACCACTGAGGAGTACTCGTTGATG +
Preference number: 6 (lower is better)
Translates to: VLRVWICCWKAS*TGWTTEEYSLM
Trigger: CATCAACGAGTACTCCTCAGTGGTCCAGCCGGTGCAGCTGGCCTTCCAGCAGCAGATCCAGACCCTCAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 72 bp CCTCCTGGAGCTTCGTACTCTGAAGAGCCAGGCATCTaGATGGGAGGCTTGCTGTCATCAGGCTGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: PPGASYSEEPGI*MGGLLSSGWVV
Trigger: CACCACCCAGCCTGATGACAGCAAGCCTCCCATCCAGATGCCTGGCTCTTCAGAGTACGAAGCTCCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CCA 72 bp AACTGGGCGAGCTTGTCGATGACATTTCGAAGCTCCTaGTCTGGAGGACGGAGAAAAGGCCACGCGGGGCGT +
Preference number: 6 (lower is better)
Translates to: NWASLSMTFRSS*SGGRRKGHAGR
Trigger: ACGCCCCGCGTGGCCTTTTCTCCGTCCTCCAGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS CCA 72 bp GACCCGAAAGAAAGAGGTTTGTGGCAGAGCCCGGACTaGAATCCGAGAAAGGAAGCGCTCGATGGGACGGCC +
Preference number: 6 (lower is better)
Translates to: DPKERGLWQSPD*NPRKEALDGTA
Trigger: GGCCGTCCCATCGAGCGCTTCCTTTCTCGGATTCCAGTCCGGGCTCTGCCACAAACCTCTTTCTTTCGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CAA 72 bp AACTCGGGCCCATTGCGAGCCACGAACTGGGCGAGCTaGTCGATGACATTTCGAAGCTCCTGGTCATCGGGG +
Preference number: 6 (lower is better)
Translates to: NSGPLRATNWAS*SMTFRSSWSSG
Trigger: CCCCGATGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000551747.1
CDS CAA 72 bp CTGAACATCCAGTTCTTCCCGGCCGAGATGGCGTCCTaGGTGCACGTGTCGATGATGGGCTGCAGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: LNIQFFPAEMAS*VHVSMMGCRRL
Trigger: CAACCTCCTGCAGCCCATCATCGACACGTGCACCAAGGACGCCATCTCGGCCGGGAAGAACTGGATGTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS CAA 90 bp TTGGAGGATCTTGAGTTGGAGCGGGAGGAAGAACGCCCTCGACTCTaGGATCTGCTCCGAGACCTCGAGGGTCCGCTGTTCCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LEDLELEREEERPRL*DLLRDLEGPLFLFS
Trigger: GGAGAAGAGGAACAGCGGACCCTCGAGGTCTCGGAGCAGATCCAAGAGTCGAGGGCGTTCTTCCTCCCGCTCCAACTCAAGATCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000600432.1
CDS CAA 90 bp ATCTGGAGCGGGAGTAGGAACGGGAGCAGGAGCGCGACCTTGACCTaGAGTACGAGCCTGAAGACTTGGAGGATCTTGAGTTGGAGCGGG +
Preference number: 6 (lower is better)
Translates to: IWSGSRNGSRSATLT*STSLKTWRILSWSG
Trigger: CCCGCTCCAACTCAAGATCCTCCAAGTCTTCAGGCTCGTACTCAAGGTCAAGGTCGCGCTCCTGCTCCCGTTCCTACTCCCGCTCCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000600432.1
CDS TCA 72 bp TCCCGGCCGAGATGGCGTCCTTGGTGCACGTGTCGATaGTGGGCTGCAGGAGGTTGTCAAACTCGTTCATGT +
Preference number: 6 (lower is better)
Translates to: SRPRWRPWCTCR*WAAGGCQTRSC
Trigger: ACATGAACGAGTTTGACAACCTCCTGCAGCCCATCATCGACACGTGCACCAAGGACGCCATCTCGGCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS TCA 72 bp GCCCATTGCGAGCCACGAACTGGGCGAGCTTGTCGATaGCATTTCGAAGCTCCTGGTCTGGAGGACGGAGAA +
Preference number: 6 (lower is better)
Translates to: AHCEPRTGRACR*HFEAPGLEDGE
Trigger: TTCTCCGTCCTCCAGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS CCA 72 bp TCTTCTGCTGCTTGTCTTCCTCCACGGCCAAGAAGCTaGTGCAGTAGATGGGCACCACGACCTTCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: SSAACLPPRPRS*CSRWAPRPSAG
Trigger: CCCTGCAGAAGGTCGTGGTGCCCATCTACTGCACCAGCTTCTTGGCCGTGGAGGAAGACAAGCAGCAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS CAA 72 bp AACTCGGGCCCATTGCGAGCCACGAACTGGGCGAGCTaGTCGATGACATTTCGAAGCTCCTGGTCTGGAGGA +
Preference number: 6 (lower is better)
Translates to: NSGPLRATNWAS*SMTFRSSWSGG
Trigger: TCCTCCAGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS CAA 72 bp CCCAGTGACCCTGTAGAAGGAAATACCCACCCAACCTaGGGGAGGGTGGAGACAGCAACAGTGGGAAGGGTG +
Preference number: 6 (lower is better)
Translates to: PSDPVEGNTHPT*GRVETATVGRV
Trigger: CACCCTTCCCACTGTTGCTGTCTCCACCCTCCCCAAGGTTGGGTGGGTATTTCCTTCTACAGGGTCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS CAA 90 bp AGCGCGACCTTGACCTTGAGTACGAGCCTGAAGACTTGGAGGATCTaGAGTTGGAGCGGGAGGAAGAACGCCCTCGACTCTTGGATCTGC +
Preference number: 6 (lower is better)
Translates to: SATLTLSTSLKTWRI*SWSGRKNALDSWIC
Trigger: GCAGATCCAAGAGTCGAGGGCGTTCTTCCTCCCGCTCCAACTCAAGATCCTCCAAGTCTTCAGGCTCGTACTCAAGGTCAAGGTCGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000600432.1
CDS GCA 72 bp CTGATGGCTGAGCAAAGTCAGGTGACCGCGTGTGTGTaGGTGCAAATCAGTGACGAGGGCAGGAGACAGACA +
Preference number: 6 (lower is better)
Translates to: LMAEQSQVTACV*VQISDEGRRQT
Trigger: TGTCTGTCTCCTGCCCTCGTCACTGATTTGCACGCACACACACGCGGTCACCTGACTTTGCTCAGCCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS GCA 72 bp ACGGGGTTGGGTACTGAACGTGACAGATGTGATACCTaGCCTGAGCAGCCGCACCACCTGGTGACTATCCAT +
Preference number: 6 (lower is better)
Translates to: TGLGTERDRCDT*PEQPHHLVTIH
Trigger: ATGGATAGTCACCAGGTGGTGCGGCTGCTCAGGGCAGGTATCACATCTGTCACGTTCAGTACCCAACCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CCA 72 bp AGCGCGACCTTGACCTTGAGTACGAGCCTGAAGACTTaGAGGATCTTGAGTTGGAGCGGGAGGAAGAACGCC +
Preference number: 6 (lower is better)
Translates to: SATLTLSTSLKT*RILSWSGRKNA
Trigger: GGCGTTCTTCCTCCCGCTCCAACTCAAGATCCTCCAAGTCTTCAGGCTCGTACTCAAGGTCAAGGTCGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000600432.1
CDS CAA 72 bp GGGAGTAGGAACGGGAGCAGGAGCGCGACCTTGACCTaGAGTACGAGCCTGAAGACTTGGAGGATCTTGAGT +
Preference number: 6 (lower is better)
Translates to: GSRNGSRSATLT*STSLKTWRILS
Trigger: ACTCAAGATCCTCCAAGTCTTCAGGCTCGTACTCAAGGTCAAGGTCGCGCTCCTGCTCCCGTTCCTACTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000600432.1
CDS CAA 90 bp GAGATGGCGTCCTTGGTGCACGTGTCGATGATGGGCTGCAGGAGGTaGTCAAACTCGTTCATGTCTAGCTGGGTCTCCTCCAGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: EMASLVHVSMMGCRR*SNSFMSSWVSSRSF
Trigger: GAAGCTTCTGGAGGAGACCCAGCTAGACATGAACGAGTTTGACAACCTCCTGCAGCCCATCATCGACACGTGCACCAAGGACGCCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS TCA 72 bp GACCAAGCCCCAGGGCTGGGCTCTGTAGCTGCTGAATaGTGGAGTCATCGAAGTAGCCGTTTTTCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: DQAPGLGSVAAE*WSHRSSRFSPR
Trigger: TCTGGGAGAAAAACGGCTACTTCGATGACTCCATCATTCAGCAGCTACAGAGCCCAGCCCTGGGGCTTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198939.6
ENST00000546361.7
CDS TCA 72 bp CAGCATCTGATGGCCTTTGTTCTCTTCTCCGAGCCTTaGGTCAGGGATGGGAGGCGCCGAATTAGAACCCAG +
Preference number: 6 (lower is better)
Translates to: QHLMAFVLFSEP*VRDGRRRIRTQ
Trigger: CTGGGTTCTAATTCGGCGCCTCCCATCCCTGACTCAAGGCTCGGAGAAGAGAACAAAGGCCATCAGATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000544299.5
ENST00000546361.7
ENST00000597261.1
CDS GCA 72 bp GATTTCTGCTGCAGGCATCTGAAATGCACAAAACCTTaGTGGACCCACAGGGAGACGGCAAAGGGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: DFCCRHLKCTKP*WTHRETAKGAG
Trigger: TCCAGCCCCCTTTGCCGTCTCCCTGTGGGTCCAGCAAGGTTTTGTGCATTTCAGATGCCTGCAGCAGAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CCA 72 bp ATCTTCTCAAACTCGGGCCCATTGCGAGCCACGAACTaGGCGAGCTTGTCGATGACATTTCGAAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: IFSNSGPLRATN*ASLSMTFRSSW
Trigger: CCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTTTGAGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
ENST00000551747.1
CDS CAA 72 bp TCCTTGGTGCACGTGTCGATGATGGGCTGCAGGAGGTaGTCAAACTCGTTCATGTCTAGCTGGGTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SLVHVSMMGCRR*SNSFMSSWVSS
Trigger: GGAGGAGACCCAGCTAGACATGAACGAGTTTGACAACCTCCTGCAGCCCATCATCGACACGTGCACCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
CDS CAA 90 bp ATCTTCTCAAACTCGGGCCCATTGCGAGCCACGAACTGGGCGAGCTaGTCGATGACATTTCGAAGCTCCTGGTCTGGAGGACGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: IFSNSGPLRATNWAS*SMTFRSSWSGGRRK
Trigger: TTTTCTCCGTCCTCCAGACCAGGAGCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTTTGAGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546538.1
CDS CCA 72 bp TCAGCATTGAGAGCAGGACACCTCCAACCCAGATGGTaGTTAGAAAGCAGACCCCAGTTACTGCCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: SALRAGHLQPRW*LESRPQLLPQA
Trigger: AGCCTGAGGCAGTAACTGGGGTCTGCTTTCTAACCACCATCTGGGTTGGAGGTGTCCTGCTCTCAATGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600432.1
CDS CAA 72 bp TGCTTCTCCATAGTCATCTTCTCAAACTCGGGCCCATaGCGAGCCACGAACTGGGCGAGCTTGTCGATGACA +
Preference number: 6 (lower is better)
Translates to: CFSIVIFSNSGP*RATNWASLSMT
Trigger: TGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTTTGAGAAGATGACTATGGAGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
ENST00000551747.1
CDS TCA 72 bp GGGACTTTCAAACCAAGCCAGCATCTTCCTGTAGACTaGAGACGGGAGGCTCTTCCCTCATCAGCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: GTFKPSQHLPVD*RREALPSSASA
Trigger: AGCAGAAGCTGATGAGGGAAGAGCCTCCCGTCTTCAGTCTACAGGAAGATGCTGGCTTGGTTTGAAAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544299.5
CDS GCA 72 bp GTGGGAACAGCGGAACAGGGATCGTGTGGACCGAGCTaGTCCACTTCAAAGAATAAACGACCCGAAAGAAAG +
Preference number: 6 (lower is better)
Translates to: VGTAEQGSCGPS*STSKNKRPERK
Trigger: CTTTCTTTCGGGTCGTTTATTCTTTGAAGTGGAGCAGCTCGGTCCACACGATCCCTGTTCCGCTGTTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CAA 90 bp TTGTCCTTCTGCTTCTCCATAGTCATCTTCTCAAACTCGGGCCCATaGCGAGCCACGAACTGGGCGAGCTTGTCGATGACATTTCGAAGC +
Preference number: 6 (lower is better)
Translates to: LSFCFSIVIFSNSGP*RATNWASLSMTFRS
Trigger: GCTTCGAAATGTCATCGACAAGCTCGCCCAGTTCGTGGCTCGCAATGGGCCCGAGTTTGAGAAGATGACTATGGAGAAGCAGAAGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000198939.6
ENST00000546361.7
ENST00000546538.1
ENST00000551747.1
CDS CAA 90 bp CGAGCTGCTCCACTTCAAAGAATAAACGACCCGAAAGAAAGAGGTTaGTGGCAGAGCCCGGACTGGAATCCGAGAAAGGAAGCGCTCGAT +
Preference number: 6 (lower is better)
Translates to: RAAPLQRINDPKERG*WQSPDWNPRKEALD
Trigger: ATCGAGCGCTTCCTTTCTCGGATTCCAGTCCGGGCTCTGCCACAAACCTCTTTCTTTCGGGTCGTTTATTCTTTGAAGTGGAGCAGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CCA 72 bp CTTCAAAGAATAAACGACCCGAAAGAAAGAGGTTTGTaGCAGAGCCCGGACTGGAATCCGAGAAAGGAAGCG +
Preference number: 6 (lower is better)
Translates to: LQRINDPKERGL*QSPDWNPRKEA
Trigger: CGCTTCCTTTCTCGGATTCCAGTCCGGGCTCTGCCACAAACCTCTTTCTTTCGGGTCGTTTATTCTTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CAA 90 bp CCTGGCAAACTCCTAGTTATTCATTTAAACAATCTAGAGACGGGGTaGGGTACTGAACGTGACAGATGTGATACCTGCCCTGAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: PGKLLVIHLNNLETG*GTERDRCDTCPEQP
Trigger: CGGCTGCTCAGGGCAGGTATCACATCTGTCACGTTCAGTACCCAACCCCGTCTCTAGATTGTTTAAATGAATAACTAGGAGTTTGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CAA 72 bp CCACTTCAAAGAATAAACGACCCGAAAGAAAGAGGTTaGTGGCAGAGCCCGGACTGGAATCCGAGAAAGGAA +
Preference number: 6 (lower is better)
Translates to: PLQRINDPKERG*WQSPDWNPRKE
Trigger: TTCCTTTCTCGGATTCCAGTCCGGGCTCTGCCACAAACCTCTTTCTTTCGGGTCGTTTATTCTTTGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS GCA 72 bp CCACCTGGTGACTATCCATTATTCAAAGGCCAGCTCTaGTTCCTAACTTTAAACTTCTTTAGAGCAGGACTG +
Preference number: 6 (lower is better)
Translates to: PPGDYPLFKGQL*FLTLNFFRAGL
Trigger: CAGTCCTGCTCTAAAGAAGTTTAAAGTTAGGAAGCAGAGCTGGCCTTTGAATAATGGATAGTCACCAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551747.1
CDS CAA 72 bp CTCCTAGTTATTCATTTAAACAATCTAGAGACGGGGTaGGGTACTGAACGTGACAGATGTGATACCTGCCCT +
Preference number: 6 (lower is better)
Translates to: LLVIHLNNLETG*GTERDRCDTCP
Trigger: AGGGCAGGTATCACATCTGTCACGTTCAGTACCCAACCCCGTCTCTAGATTGTTTAAATGAATAACTAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551747.1