RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHDH (Homo sapiens)

Ensembl gene IDs: ENSG00000016391

Ensembl transcript IDs: ENST00000315251.11, ENST00000467802.1, ENST00000481668.5

Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGCCCCGAGACCCAGGTGACTGATGGCCATGGACTGCTGCTGTaGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCC +
Preference number: 1 (lower is better)
Translates to: GSPETQVTDGHGLLL*GRWGPSVGEISLLA
Trigger: GGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAGCAGCAGTCCATGGCCATCAGTCACCTGGGTCTCGGGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp AGCAGGAAAGCTGCACGAGGCCCTCCAAGTTACGGGGCTGGCACCTaGACTCCTGTTTCTGCACTCTTGCAGGCAGCCCCGAGACCCAGG +
Preference number: 1 (lower is better)
Translates to: SRKAARGPPSYGAGT*TPVSALLQAAPRPR
Trigger: CCTGGGTCTCGGGGCTGCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGGCCTCGTGCAGCTTTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp ACGCTCCAGCAGGAAAGCTGCACGAGGCCCTCCAAGTTACGGGGCTaGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCAGCCCCGAG +
Preference number: 1 (lower is better)
Translates to: TLQQESCTRPSKLRG*HLNSCFCTLAGSPE
Trigger: CTCGGGGCTGCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGGCCTCGTGCAGCTTTCCTGCTGGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp TGGGCTGTGAGGGCCACGTTACCTCTCGGTGCAGTCTCACCTGTGTaGGATGGGACCAGGGGCACCACTTGCTTTCCTGCTGACCCTGCT +
Preference number: 1 (lower is better)
Translates to: WAVRATLPLGAVSPV*DGTRGTTCFPADPA
Trigger: AGCAGGGTCAGCAGGAAAGCAAGTGGTGCCCCTGGTCCCATCTCACACAGGTGAGACTGCACCGAGAGGTAACGTGGCCCTCACAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 90 bp ACGAGGCCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTaGACTCTTGCAGGCAGCCCCGAGACCCAGGTGACTGATGGCCAT +
Preference number: 1 (lower is better)
Translates to: TRPSKLRGWHLNSCF*TLAGSPETQVTDGH
Trigger: ATGGCCATCAGTCACCTGGGTCTCGGGGCTGCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGGCCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp AAGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTaGATCCACACACGCTCCAGCAGGAAAGCTGCACGAGGCCCTCCA +
Preference number: 1 (lower is better)
Translates to: KGQHSHGWSRTIPCP*IHTRSSRKAARGPP
Trigger: TGGAGGGCCTCGTGCAGCTTTCCTGCTGGAGCGTGTGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp CCTACGAAGTTTCAGAATTGGGCGAAGGCCAGGCGTGGTGGGCTGTaGGGGCCACGTTACCTCTCGGTGCAGTCTCACCTGTGTGAGATG +
Preference number: 1 (lower is better)
Translates to: PTKFQNWAKARRGGL*GPRYLSVQSHLCEM
Trigger: CATCTCACACAGGTGAGACTGCACCGAGAGGTAACGTGGCCCTCACAGCCCACCACGCCTGGCCTTCGCCCAATTCTGAAACTTCGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 90 bp TGTGACTTACTGCCTCAGCTAAAGCTTGCAGCTCAAGAAGGAGGATaGCCCTTCCTTCGCGAACCCTCCGTGGGTCTGGCAGGCACCCAG +
Preference number: 1 (lower is better)
Translates to: CDLLPQLKLAAQEGG*PFLREPSVGLAGTQ
Trigger: CTGGGTGCCTGCCAGACCCACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGCTGAGGCAGTAAGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp GCTCTATCCTACGAAGTTTCAGAATTGGGCGAAGGCCAGGCGTGGTaGGCTGTGAGGGCCACGTTACCTCTCGGTGCAGTCTCACCTGTG +
Preference number: 1 (lower is better)
Translates to: ALSYEVSELGEGQAW*AVRATLPLGAVSPV
Trigger: CACAGGTGAGACTGCACCGAGAGGTAACGTGGCCCTCACAGCCCACCACGCCTGGCCTTCGCCCAATTCTGAAACTTCGTAGGATAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp CCAGCTCTATCCTACGAAGTTTCAGAATTGGGCGAAGGCCAGGCGTaGTGGGCTGTGAGGGCCACGTTACCTCTCGGTGCAGTCTCACCT +
Preference number: 1 (lower is better)
Translates to: PALSYEVSELGEGQA*WAVRATLPLGAVSP
Trigger: AGGTGAGACTGCACCGAGAGGTAACGTGGCCCTCACAGCCCACCACGCCTGGCCTTCGCCCAATTCTGAAACTTCGTAGGATAGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp CCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAATaGAAGACTCCCTTCATGGCAGGGGAACGCTCAGGTTCTGGACAT +
Preference number: 1 (lower is better)
Translates to: PMLASSGDSLSSWGE*KTPFMAGERSGSGH
Trigger: ATGTCCAGAACCTGAGCGTTCCCCTGCCATGAAGGGAGTCTTTCATTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 90 bp GTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTaGCAGATGCTCTTGGCTCCCACACAGCCCACCCCTATCCCCTAT +
Preference number: 1 (lower is better)
Translates to: VPTTPASGTHHLQSG*QMLLAPTQPTPIPY
Trigger: ATAGGGGATAGGGGTGGGCTGTGTGGGAGCCAAGAGCATCTGGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp GAGACCCAGGTGACTGATGGCCATGGACTGCTGCTGTGGGGCAGGTaGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTAGAA +
Preference number: 1 (lower is better)
Translates to: ETQVTDGHGLLLWGR*GPSVGEISLLAGLE
Trigger: TTCTAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAGCAGCAGTCCATGGCCATCAGTCACCTGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp CCTGGCCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTaGCCCAGTGGAGCCCCAGTTACCTGCCTCACTCTGAGAGTGAAA +
Preference number: 1 (lower is better)
Translates to: PGPGLIRTRATTLSE*PSGAPVTCLTLRVK
Trigger: TTTCACTCTCAGAGTGAGGCAGGTAACTGGGGCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp TGCCATATCCATACCTGTTCCAGAGAAGAAGGGTCAGCACAGTCATaGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACACACGCTC +
Preference number: 1 (lower is better)
Translates to: CHIHTCSREEGSAQS*LVQDYPLPLNPHTL
Trigger: GAGCGTGTGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCTTCTTCTCTGGAACAGGTATGGATATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp ACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTaGATCTCGCTTCACCATGTGGCACTTTCCAGCTCTATCCTACGA +
Preference number: 1 (lower is better)
Translates to: TISAQPMDSDIHPDS*ISLHHVALSSSILR
Trigger: TCGTAGGATAGAGCTGGAAAGTGCCACATGGTGAAGCGAGATCCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp CCAGTGAGAGCCTCCGACAGGGCAGGTACTGTGCCAGGGCAGCTCTaGAATTATGGATATTCTTATCCTCCTGGTTCCTTCGGTGCCAAT +
Preference number: 1 (lower is better)
Translates to: PVRASDRAGTVPGQL*NYGYSYPPGSFGAN
Trigger: ATTGGCACCGAAGGAACCAGGAGGATAAGAATATCCATAATTTCAGAGCTGCCCTGGCACAGTACCTGCCCTGTCGGAGGCTCTCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 90 bp ATTTCACCGTCAACTGGCAGCGAGAACCTCACTAAGAACCATCTCTaGTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGATCTC +
Preference number: 1 (lower is better)
Translates to: ISPSTGSENLTKNHL*SAYGLRHPPRQLDL
Trigger: GAGATCCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAGTGAGGTTCTCGCTGCCAGTTGACGGTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp GCCACCAGACTGAACCCACCATGGTCTCAGACACTGACACACCCATaGGACACAGAGATGGTAGAACTAAGTGACTGTCACCCTGCCATA +
Preference number: 1 (lower is better)
Translates to: ATRLNPPWSQTLTHP*DTEMVELSDCHPAI
Trigger: TATGGCAGGGTGACAGTCACTTAGTTCTACCATCTCTGTGTCCCATGGGTGTGTCAGTGTCTGAGACCATGGTGGGTTCAGTCTGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp TTGTCCTCTGGGGACTGGTGGTGCTGCTTAAGAAATAAGGGGTGCTaGGGACAGAGGAGCAACGTGGTGATCTATAGGATTGGAGTGTCG +
Preference number: 1 (lower is better)
Translates to: LSSGDWWCCLRNKGC*GQRSNVVIYRIGVS
Trigger: CGACACTCCAATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTATTTCTTAAGCAGCACCACCAGTCCCCAGAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp ACAGGCTTCTGCAATAGGTCAGGGCTCCTGAGAGCACTGGGCACATaGACAGCGCATTCTGTTGTGCTCTTTGAGCCATTTTTGCAAAGC +
Preference number: 1 (lower is better)
Translates to: TGFCNRSGLLRALGT*TAHSVVLFEPFLQS
Trigger: GCTTTGCAAAAATGGCTCAAAGAGCACAACAGAATGCGCTGTCCATGTGCCCAGTGCTCTCAGGAGCCCTGACCTATTGCAGAAGCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp TGGACTCCGACATCCACCCAGACAGCTGGATCTCGCTTCACCATGTaGCACTTTCCAGCTCTATCCTACGAAGTTTCAGAATTGGGCGAA +
Preference number: 1 (lower is better)
Translates to: WTPTSTQTAGSRFTM*HFPALSYEVSELGE
Trigger: TTCGCCCAATTCTGAAACTTCGTAGGATAGAGCTGGAAAGTGCCACATGGTGAAGCGAGATCCAGCTGTCTGGGTGGATGTCGGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp ACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTACTGTGTaGCTTACTGCCTCAGCTAAAGCTTGCAGCTCAAGAAGGAGGATG +
Preference number: 1 (lower is better)
Translates to: TLGTYVPAQAELTTV*LTASAKACSSRRRM
Trigger: CATCCTCCTTCTTGAGCTGCAAGCTTTAGCTGAGGCAGTAAGTCACACAGTAGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp TGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTaGAGCCCCAGTTACCTGCCTCACTCTGAGAGTGAAATTAGGCAG +
Preference number: 1 (lower is better)
Translates to: WFNKNQSHNPLRVTQ*SPSYLPHSESEIRQ
Trigger: CTGCCTAATTTCACTCTCAGAGTGAGGCAGGTAACTGGGGCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp TCAGACACTGACACACCCATGGGACACAGAGATGGTAGAACTAAGTaGCTGTCACCCTGCCATATCCATACCTGTTCCAGAGAAGAAGGG +
Preference number: 1 (lower is better)
Translates to: SDTDTPMGHRDGRTK*LSPCHIHTCSREEG
Trigger: CCCTTCTTCTCTGGAACAGGTATGGATATGGCAGGGTGACAGTCACTTAGTTCTACCATCTCTGTGTCCCATGGGTGTGTCAGTGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 90 bp TTCGCTACAAGCAGAAAGACTAGATGTTTGGGTGCCTACAACTCCTaGTTCAGGAACTCACCATCTCCAGTCAGGCTGCCAGATGCTCTT +
Preference number: 1 (lower is better)
Translates to: FATSRKTRCLGAYNS*FRNSPSPVRLPDAL
Trigger: AAGAGCATCTGGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAACATCTAGTCTTTCTGCTTGTAGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp CTACACCACTGTCAACATTATCCTGGACTCTGTGTCTCTCTCTGTTaGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGAC +
Preference number: 1 (lower is better)
Translates to: LHHCQHYPGLCVSLC*VLWHHIRPKLPDQD
Trigger: GTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACCCAACAGAGAGAGACACAGAGTCCAGGATAATGTTGACAGTGGTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 90 bp TTCTTTCACACAGGGGCATTTCTACAGCCACAGGGTGCATGGCTGTaGTTAACTGTGTTTTCCATCCTAGTCTGTTCCTGTGGACGTCTA +
Preference number: 1 (lower is better)
Translates to: FFHTGAFLQPQGAWL*LTVFSILVCSCGRL
Trigger: TAGACGTCCACAGGAACAGACTAGGATGGAAAACACAGTTAAGCACAGCCATGCACCCTGTGGCTGTAGAAATGCCCCTGTGTGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 90 bp TGTCAACATTATCCTGGACTCTGTGTCTCTCTCTGTTGGGTCTTGTaGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAGTGT +
Preference number: 1 (lower is better)
Translates to: CQHYPGLCVSLCWVL*HHIRPKLPDQDPKC
Trigger: ACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACCCAACAGAGAGAGACACAGAGTCCAGGATAATGTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp TATGAGAGAGTCCTTTCTCGGGCTAGCTGCTTCAGTAGGAATCAGTaGTCTGGTACGTGGGGTTTGCTCTTGGTTTCTGCATTTCTTGGT +
Preference number: 1 (lower is better)
Translates to: YERVLSRASCFSRNQ*SGTWGLLLVSAFLG
Trigger: ACCAAGAAATGCAGAAACCAAGAGCAAACCCCACGTACCAGATCACTGATTCCTACTGAAGCAGCTAGCCCGAGAAAGGACTCTCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp CAGTACTTGTCTCATTTCCCAAGACTTTATCCAATTCTCAGCCACTaGGTAGGGTACCACCTGGGTCCTAGTGTGCTAGATAGTTTCAGG +
Preference number: 1 (lower is better)
Translates to: QYLSHFPRLYPILSH*VGYHLGPSVLDSFR
Trigger: CCTGAAACTATCTAGCACACTAGGACCCAGGTGGTACCCTACTCAGTGGCTGAGAATTGGATAAAGTCTTGGGAAATGAGACAAGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp AACATGGCTAAGTATTTGAGAGTGAAAGAAGGGCCTGGGTGCAATTaGGCAGCATCACCAATGGGCTCCTCTTACCATATGACGTTTTGC +
Preference number: 1 (lower is better)
Translates to: NMAKYLRVKEGPGCN*AASPMGSSYHMTFC
Trigger: GCAAAACGTCATATGGTAAGAGGAGCCCATTGGTGATGCTGCTCAATTGCACCCAGGCCCTTCTTTCACTCTCAAATACTTAGCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 90 bp AAACTGCTGTACTGTATGTTCTCTTTGAGGGCTTTTATATGCAATTaGATGAGGGCTGAAGTTTTCATTAGAATGCACTCACACTCTGAC +
Preference number: 1 (lower is better)
Translates to: KLLYCMFSLRAFICN*MRAEVFIRMHSHSD
Trigger: GTCAGAGTGTGAGTGCATTCTAATGAAAACTTCAGCCCTCATTCAATTGCATATAAAAGCCCTCAAAGAGAACATACAGTACAGCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCGCCCCGAGACCCAGGTaGCTGATGGCCATGGACTGC +
Preference number: 2 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLAPRPR*LMAMDC
Trigger: GCAGTCCATGGCCATCAGTCACCTGGGTCTCGGGGC...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGCTGTGCTGGCCCTCTTaGCTTATCAGGGGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLLCWPS*LIRGLP
Trigger: GGGAAGCCCCCTGATAAGCCAAGAGGGCCAGCACAG...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTAACCCTCCGTGGGTCTaGCAGGCACCCAGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTNPPWV*QAPSLC
Trigger: ACAGAGGCTGGGTGCCTGCCAGACCCACGGAGGGTT...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGGCACCCAGCCTCTGTaGATGGCCTGGGAAGGAACC +
Preference number: 2 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSGTQPL*MAWEGT
Trigger: GGTTCCTTCCCAGGCCATGCACAGAGGCTGGGTGCC...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCATGGCCATGGACTGCTaGTGTGGGGCAGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSMAMDC*CGAGGD
Trigger: GTCCCCACCTGCCCCACAGCAGCAGTCCATGGCCAT...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCTTCGCGAACCCTCCGTaGGTCTGGCAGGCACCCAGC +
Preference number: 2 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSFANPP*VWQAPS
Trigger: GCTGGGTGCCTGCCAGACCCACGGAGGGTTCGCGAA...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCCGAGACCCAGGTGACTaGTGGCCATGGACTGCTGCT +
Preference number: 2 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSRDPGD*WPWTAA
Trigger: AGCAGCAGTCCATGGCCATCAGTCACCTGGGTCTCG...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACATACGGGGCTGGCACCTaGACTCCTGTTTCTGCACTC +
Preference number: 2 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTYGAGT*TPVSAL
Trigger: GAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTA...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGCCTGTGAGGGCAGCCTaGGCCACTAAACAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWPVRAA*ATKQVQ
Trigger: CTGGACCTGTTTAGTGGCTCAGGCTGCCCTCACAGG...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAATGGGATGGCTCAGGCTaGCAAGTCATTTCCCAAGAC +
Preference number: 2 (lower is better)
Translates to: PFSPMLASSGDSLSSWGEWDGSG*QVISQD
Trigger: GTCTTGGGAAATGACTTGGCAGCCTGAGCCATCCCA...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAATCCAAGTTACGGGGCTaGCACCTGAACTCCTGTTTC +
Preference number: 2 (lower is better)
Translates to: PFSPMLASSGDSLSSWGESKLRG*HLNSCF
Trigger: GAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGA...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGTGGGAGCAAGGGCTGTaGTGGCCCTCTTGGCTTATC +
Preference number: 2 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWWEQGL*WPSWLI
Trigger: GATAAGCCAAGAGGGCCAGCACAGCCCTTGCTCCCA...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTCTGGGAAGGAACCACTaGCCTGGGTTAGAGAATGCC +
Preference number: 2 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRLGRNH*PGLENA
Trigger: GGCATTCTCTAACCCAGGGCAGTGGTTCCTTCCCAG...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCCTCCAGCAGGAAAGCTaGACGAGGCCCTCCAAGTTA +
Preference number: 2 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLLQQES*TRPSKL
Trigger: TAACTTGGAGGGCCTCGTGCAGCTTTCCTGCTGGAG...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTTCTCAGGCTGAATGCTaGCCTTCCCCAAATGGCCCA +
Preference number: 2 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRSQAEC*PSPNGP
Trigger: TGGGCCATTTGGGGAAGGCCAGCATTCAGCCTGAGA...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTACATCTCAGGCTGAATaGTGGCCTTCCCCAAATGGC +
Preference number: 2 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRTSQAE*WPSPNG
Trigger: GCCATTTGGGGAAGGCCAGCATTCAGCCTGAGATGT...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCTGCCTTTCTCCCCCATaGTGGCTTCCTCAGGTGACA +
Preference number: 2 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSCLSPP*WLPQVT
Trigger: TGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGGCA...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCATCAGGGGGCTTCCCTaGTCATCCTCCAGCAGCAAC +
Preference number: 2 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSIRGLP*SSSSSN
Trigger: GTTGCTGCTGGAGGATGACCAGGGAAGCCCCCTGAT...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 90 bp CATATCCATACCTGTTCCAGAGAAGAAGGGTCAGCACAGTCATGGTaGGTCCAGGACTATCCCCTGCCCCTGAATCCACACACGCTCCAG +
Preference number: 2 (lower is better)
Translates to: HIHTCSREEGSAQSW*VQDYPLPLNPHTLQ
Trigger: CTGGAGCGTGTGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCTTCTTCTCTGGAACAGGTATGGATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGGAGCCCCAGTTACCTaGCTCACTCTGAGAGTGAAA +
Preference number: 2 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSGAPVT*LTLRVK
Trigger: TTTCACTCTCAGAGTGAGGCAGGTAACTGGGGCTCC...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCCCCACAGGGAAAGGCTaGGGAAAAGGAGCTGGATTC +
Preference number: 2 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSPTGKG*GKGAGF
Trigger: GAATCCAGCTCCTTTTCCCCAGCCTTTCCCTGTGGG...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCTGTGCCAGCCCAGGCTaGACTAACTACTGTGTGACT +
Preference number: 2 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSCASPG*TNYCVT
Trigger: AGTCACACAGTAGTTAGTTCAGCCTGGGCTGGCACA...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAGGAGCTGGATTCACTaGCCAGTACTTGTCTCATTT +
Preference number: 2 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLRSWIH*PVLVSF
Trigger: AAATGAGACAAGTACTGGGCAGTGAATCCAGCTCCT...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACAGTTTCCACGCAACAATaGTTTTCTTCCCAGCCCTTG +
Preference number: 2 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTVSTQQ*FSSQPL
Trigger: CAAGGGCTGGGAAGAAAAGCATTGTTGCGTGGAAAC...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGTATTCCATCAGGAGCTaGCTTCTACTAGTGCAGCGG +
Preference number: 2 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWYSIRS*LLLVQR
Trigger: CCGCTGCACTAGTAGAAGGCAGCTCCTGATGGAATA...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGCAGCCACAGGGTGCATaGCTGTGCTTAACTGTGTTT +
Preference number: 2 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWQPQGA*LCLTVF
Trigger: AAACACAGTTAAGCACAGCCATGCACCCTGTGGCTG...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGAGTGAAAGAAGGGCCTaGGTGCAATTGAGCAGCATC +
Preference number: 2 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWSERRA*VQLSSI
Trigger: GATGCTGCTCAATTGCACCCAGGCCCTTCTTTCACT...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAGCTGGCTTCCTCAGGTaGCAGCCTCTCCTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAAGFLR*QPLLLG
Trigger: CCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGC...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTCCCTGGGTTAGAGAATaGCACGTGAACACAAGAAAA +
Preference number: 2 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRPWVRE*HVNTRK
Trigger: TTTTCTTGTGTTCACGTGGCATTCTCTAACCCAGGG...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAAGCAGGTCCAGCTGGCTaGTCTGCCCCTTGGGTATCC +
Preference number: 2 (lower is better)
Translates to: GKSSMILILYLWIHHGLQAGPAG*SAPWVS
Trigger: GGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGC...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGCAGCGCATTCTGTTGTaGTCTTTGAGCCATTTTTGC +
Preference number: 2 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWQRILL*SLSHFC
Trigger: GCAAAAATGGCTCAAAGAGCACAACAGAATGCGCTG...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAGCTGCCAGATGCTCTTaGCTCCCACACAGCCCACCC +
Preference number: 2 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAAARCS*LPHSPP
Trigger: GGGTGGGCTGTGTGGGAGCCAAGAGCATCTGGCAGC...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAGAAGGCCAGGCGTGGTaGGCTGTGAGGGCCACGTTA +
Preference number: 2 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAEGQAW*AVRATL
Trigger: TAACGTGGCCCTCACAGCCCACCACGCCTGGCCTTC...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 90 bp GAGATGATGCCTGCAACCTTCGCTACAAGCAGAAAGACTAGATGTTaGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTC +
Preference number: 2 (lower is better)
Translates to: EMMPATFATSRKTRC*GAYNSCFRNSPSPV
Trigger: GACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAACATCTAGTCTTTCTGCTTGTAGCGAAGGTTGCAGGCATCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 90 bp CACTGTCAACATTATCCTGGACTCTGTGTCTCTCTCTGTTGGGTCTaGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGACCCTAAG +
Preference number: 2 (lower is better)
Translates to: HCQHYPGLCVSLCWV*WHHIRPKLPDQDPK
Trigger: CTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACCCAACAGAGAGAGACACAGAGTCCAGGATAATGTTGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 90 bp GCTACACCACTGTCAACATTATCCTGGACTCTGTGTCTCTCTCTGTaGGGTCTTGTGGCATCACATCAGGCCAAAATTGCCAGACCAGGA +
Preference number: 2 (lower is better)
Translates to: ATPLSTLSWTLCLSL*GLVASHQAKIARPG
Trigger: TCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACCCAACAGAGAGAGACACAGAGTCCAGGATAATGTTGACAGTGGTGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGTTAGAGAATGCCACGTaGACACAAGAAAAAGGATGC +
Preference number: 2 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWLENAT*TQEKGC
Trigger: GCATCCTTTTTCTTGTGTTCACGTGGCATTCTCTAA...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCATCTCAGTTCAAATGTaGGTGACTGGATCACTTTAT +
Preference number: 2 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGISVQM*VTGSLY
Trigger: ATAAAGTGATCCAGTCACTCACATTTGAACTGAGAT...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCTTTATGGCCAAATTGTaGGATTGTGTAGAACATGGC +
Preference number: 2 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLFMAKL*DCVEHG
Trigger: GCCATGTTCTACACAATCGCACAATTTGGCCATAAA...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 90 bp TGTGTCTCTCTCTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATaGCCAGACCAGGACCCTAAGTGTCTGATAGAGGCGATGATCTTT +
Preference number: 2 (lower is better)
Translates to: CVSLCWVLWHHIRPK*PDQDPKCLIEAMIF
Trigger: AAAGATCATCGCCTCTATCAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACCCAACAGAGAGAGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACCAATTCTCAGCCACTaGGTAGGGTACCACCTGGGT +
Preference number: 2 (lower is better)
Translates to: GKSSMILILYLWIHHGLQPILSH*VGYHLG
Trigger: ACCCAGGTGGTACCCTACTCAGTGGCTGAGAATTGG...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGCTGGAGTGCAGTGGTaGCATCAGGGTTCACAGGAG +
Preference number: 2 (lower is better)
Translates to: SLECTHTLTVRPDENPLLAGVQW*HQGSQE
Trigger: CTCCTGTGAACCCTGATGGCACCACTGCACTCCAGC...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAAATCCTTGTCCACTGCTaGGATGGCTCAGGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: GKSSMILILYLWIHHGLQILVHC*DGSGCQ
Trigger: TTGGCAGCCTGAGCCATCCCAGCAGTGGACAAGGAT...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTATCAAATGTGAGTGACTaGATCACTTTATTGAATGGT +
Preference number: 2 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLSNVSD*ITLLNG
Trigger: ACCATTCAATAAAGTGATCCAGTCACTCACATTTGA...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAAGAAAGACTCCCTTCATaGCAGGGGAACGCTCAGGTT +
Preference number: 2 (lower is better)
Translates to: GKSSMILILYLWIHHGLQERLPS*QGNAQV
Trigger: AACCTGAGCGTTCCCCTGCCATGAAGGGAGTCTTTC...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAAGGAACATCTCAGGCTaGATGCTGGCCTTCCCCAAA +
Preference number: 2 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAARNISG*MLAFPK
Trigger: TTTGGGGAAGGCCAGCATTCAGCCTGAGATGTTCCT...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGTTCCCAAGACCAGTATaGGAGAGTCCTTTCTCGGGC +
Preference number: 2 (lower is better)
Translates to: SLECTHTLTVRPDENPLLFPRPV*ESPFSG
Trigger: GCCCGAGAAAGGACTCTCTCATACTGGTCTTGGGAA...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTCATGGTCTCAGACACTaGCACACCCATGGGACACAG +
Preference number: 2 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCHGLRH*HTHGTQ
Trigger: CTGTGTCCCATGGGTGTGTCAGTGTCTGAGACCATG...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCATACAGGTGTGAGCCCTaGACCTGGCCCTGGTTTAAT +
Preference number: 2 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAYRCEP*TWPWFN
Trigger: ATTAAACCAGGGCCAGGTGCAGGGCTCACACCTGTA...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTGGTACTGCAAGCTTTTaGCCAAGGGGCCCAATTCCC +
Preference number: 2 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCGTASF*PRGPIP
Trigger: GGGAATTGGGCCCCTTGGCCAAAAGCTTGCAGTACC...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGTTTCTTTTCCTCTCCTaGGGACTAGGAGGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: SLECTHTLTVRPDENPLLFLFLS*GLGGQE
Trigger: CTCCTGCCCTCCTAGTCCCCAGGAGAGGAAAAGAAA...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTTTTCTTCCCAGCCCTTaGCGGTGGATGTGGATGTCT +
Preference number: 2 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCFLPSP*RWMWMS
Trigger: AGACATCCACATCCACCGTCAAGGGCTGGGAAGAAA...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAATTAAAAGGAGAGGTGTaGTGGGTTTCTTCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: GKSSMILILYLWIHHGLQLKGEV*WVSSCC
Trigger: GCAGCAGGAAGAAACCCATCACACCTCTCCTTTTAA...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGCTGGGGAAAAGGAGCTaGATTCACTGCCCAGTACTT +
Preference number: 2 (lower is better)
Translates to: SLECTHTLTVRPDENPLLLGKRS*IHCPVL
Trigger: AAGTACTGGGCAGTGAATCCAGCTCCTTTTCCCCAG...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAATTGTCCTCTGGGGACTaGTGGTGCTGCTTAAGAAAT +
Preference number: 2 (lower is better)
Translates to: GKSSMILILYLWIHHGLQLSSGD*WCCLRN
Trigger: ATTTCTTAAGCAGCACCACCAGTCCCCAGAGGACAA...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCATGTCCACTGCTGGGATaGCTCAGGCTGCCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWACPLLG*LRLPSH
Trigger: ATGACTTGGCAGCCTGAGCCATCCCAGCAGTGGACA...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGGAACGCTCAGGTTCTaGACATGTGACACTTACCAT +
Preference number: 2 (lower is better)
Translates to: SLECTHTLTVRPDENPLLGTLRF*TCDTYH
Trigger: ATGGTAAGTGTCACATGTCCAGAACCTGAGCGTTCC...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR TCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAAAAATGCATAGGTGGATaGGATATAGCTGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: GKSSMILILYLWIHHGLQKCIGG*DIAALV
Trigger: GACAAGAGCAGCTATATCTCATCCACCTATGCATTT...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR GCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAAGGTGTGTACCACCATaGCCAGCTAATTGTTTTCCA +
Preference number: 2 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAARCVPP*PANCFP
Trigger: TGGAAAACAATTAGCTGGGCATGGTGGTACACACCT...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAACGAAGTTTCAGAATTaGGCGAAGGCCAGGCGTGGT +
Preference number: 2 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWATKFQN*AKARRG
Trigger: ACCACGCCTGGCCTTCGCCCAATTCTGAAACTTCGT...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAGTGGATGTGGATGTCTaGAAAAATCCAAGTGCATTT +
Preference number: 2 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAVDVDV*KNPSAF
Trigger: AAATGCACTTGGATTTTTCCAGACATCCACATCCAC...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCATCCTCTGGGGACTGGTaGTGCTGCTTAAGAAATAAG +
Preference number: 2 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWASSGDW*CCLRNK
Trigger: CTTATTTCTTAAGCAGCACCACCAGTCCCCAGAGGA...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 72 bp CTGCACTCTTGCAGGCAGCCCCGAGACCCAGGTGACTaGTGGCCATGGACTGCTGCTGTGGGGCAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: LHSCRQPRDPGD*WPWTAAVGQVG
Trigger: CCCCACCTGCCCCACAGCAGCAGTCCATGGCCATCAGTCACCTGGGTCTCGGGGCTGCCTGCAAGAGTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 72 bp GCTGCACGAGGCCCTCCAAGTTACGGGGCTGGCACCTaGACTCCTGTTTCTGCACTCTTGCAGGCAGCCCCG +
Preference number: 3 (lower is better)
Translates to: AARGPPSYGAGT*TPVSALLQAAP
Trigger: CGGGGCTGCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGGCCTCGTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp CTGCCCCTGAATCCACACACGCTCCAGCAGGAAAGCTaGACGAGGCCCTCCAAGTTACGGGGCTGGCACCTG +
Preference number: 3 (lower is better)
Translates to: LPLNPHTLQQES*TRPSKLRGWHL
Trigger: CAGGTGCCAGCCCCGTAACTTGGAGGGCCTCGTGCAGCTTTCCTGCTGGAGCGTGTGTGGATTCAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAACCTGTTTCTGCACTCTaGCAGGCAGCCCCGAGACCC +
Preference number: 3 (lower is better)
Translates to: PFSPMLASSGDSLSSWGEPVSAL*QAAPRP
Trigger: GGGTCTCGGGGCTGCCTGCAAGAGTGCAGAAACAGG...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 72 bp GTTTCTGCACTCTTGCAGGCAGCCCCGAGACCCAGGTaGCTGATGGCCATGGACTGCTGCTGTGGGGCAGGT +
Preference number: 3 (lower is better)
Translates to: VSALLQAAPRPR*LMAMDCCCGAG
Trigger: ACCTGCCCCACAGCAGCAGTCCATGGCCATCAGTCACCTGGGTCTCGGGGCTGCCTGCAAGAGTGCAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCGCTGTGCTGGCCCTCTaGGCTTATCAGGGGGCTTCC +
Preference number: 3 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLAVLAL*AYQGAS
Trigger: GGAAGCCCCCTGATAAGCCAAGAGGGCCAGCACAGC...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp CTGCCTCAGCTAAAGCTTGCAGCTCAAGAAGGAGGATaGCCCTTCCTTCGCGAACCCTCCGTGGGTCTGGCA +
Preference number: 3 (lower is better)
Translates to: LPQLKLAAQEGG*PFLREPSVGLA
Trigger: TGCCAGACCCACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGCTGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp TCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTaGACTCTTGCAGGCAGCCCCGAGACCCAGGTGACT +
Preference number: 3 (lower is better)
Translates to: SKLRGWHLNSCF*TLAGSPETQVT
Trigger: AGTCACCTGGGTCTCGGGGCTGCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp CTTCAGGAACTCACCATCTCCAGTCAGGCTGCCAGATaGTCTTGGCTCCCACACAGCCCACCCCTATCCCCT +
Preference number: 3 (lower is better)
Translates to: LQELTISSQAAR*SWLPHSPPLSP
Trigger: AGGGGATAGGGGTGGGCTGTGTGGGAGCCAAGAGCATCTGGCAGCCTGACTGGAGATGGTGAGTTCCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp ACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTaGCAGATGCTCTTGGCTCCCACACAGCCCACCCCT +
Preference number: 3 (lower is better)
Translates to: TPASGTHHLQSG*QMLLAPTQPTP
Trigger: AGGGGTGGGCTGTGTGGGAGCCAAGAGCATCTGGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp GTGACTGATGGCCATGGACTGCTGCTGTGGGGCAGGTaGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCC +
Preference number: 3 (lower is better)
Translates to: VTDGHGLLLWGR*GPSVGEISLLA
Trigger: GGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAGCAGCAGTCCATGGCCATCAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp CAGGAAAGCTGCACGAGGCCCTCCAAGTTACGGGGCTaGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGC +
Preference number: 3 (lower is better)
Translates to: QESCTRPSKLRG*HLNSCFCTLAG
Trigger: GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGGCCTCGTGCAGCTTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp TCCTACGAAGTTTCAGAATTGGGCGAAGGCCAGGCGTaGTGGGCTGTGAGGGCCACGTTACCTCTCGGTGCA +
Preference number: 3 (lower is better)
Translates to: SYEVSELGEGQA*WAVRATLPLGA
Trigger: TGCACCGAGAGGTAACGTGGCCCTCACAGCCCACCACGCCTGGCCTTCGCCCAATTCTGAAACTTCGTAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 72 bp CACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTaGATCCACACACGCTCCAGCAGGAAAGCTGCACGA +
Preference number: 3 (lower is better)
Translates to: HSHGWSRTIPCP*IHTRSSRKAAR
Trigger: TCGTGCAGCTTTCCTGCTGGAGCGTGTGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 72 bp GCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAATaGAAGACTCCCTTCATGGCAGGGGAACGCTCAGGT +
Preference number: 3 (lower is better)
Translates to: ASSGDSLSSWGE*KTPFMAGERSG
Trigger: ACCTGAGCGTTCCCCTGCCATGAAGGGAGTCTTTCATTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp GCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTaGATCTCGCTTCACCATGTGGCACTTTCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: AQPMDSDIHPDS*ISLHHVALSSS
Trigger: AGAGCTGGAAAGTGCCACATGGTGAAGCGAGATCCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 72 bp GCTTCAACACAGGCTTCTGCAATAGGTCAGGGCTCCTaGGAGCACTGGGCACATGGACAGCGCATTCTGTTG +
Preference number: 3 (lower is better)
Translates to: ASTQASAIGQGS*EHWAHGQRILL
Trigger: CAACAGAATGCGCTGTCCATGTGCCCAGTGCTCTCAGGAGCCCTGACCTATTGCAGAAGCCTGTGTTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp TGGCCTGGGAAGGAACCACTGCCCTGGGTTAGAGAATaGCACGTGAACACAAGAAAAAGGATGCGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: WPGKEPLPWVRE*HVNTRKRMRQE
Trigger: CTCCTGCCGCATCCTTTTTCTTGTGTTCACGTGGCATTCTCTAACCCAGGGCAGTGGTTCCTTCCCAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp AAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTaGAGCCCCAGTTACCTGCCTCACTCTGAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: KNQSHNPLRVTQ*SPSYLPHSESE
Trigger: TTCACTCTCAGAGTGAGGCAGGTAACTGGGGCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp TCAACTGGCAGCGAGAACCTCACTAAGAACCATCTCTaGTCAGCCTATGGACTCCGACATCCACCCAGACAG +
Preference number: 3 (lower is better)
Translates to: STGSENLTKNHL*SAYGLRHPPRQ
Trigger: CTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAGTGAGGTTCTCGCTGCCAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp CATACCTGTTCCAGAGAAGAAGGGTCAGCACAGTCATaGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCA +
Preference number: 3 (lower is better)
Translates to: HTCSREEGSAQS*LVQDYPLPLNP
Trigger: TGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCTTCTTCTCTGGAACAGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp TGCAATAGGTCAGGGCTCCTGAGAGCACTGGGCACATaGACAGCGCATTCTGTTGTGCTCTTTGAGCCATTT +
Preference number: 3 (lower is better)
Translates to: CNRSGLLRALGT*TAHSVVLFEPF
Trigger: AAATGGCTCAAAGAGCACAACAGAATGCGCTGTCCATGTGCCCAGTGCTCTCAGGAGCCCTGACCTATTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp GGGGACTGGTGGTGCTGCTTAAGAAATAAGGGGTGCTaGGGACAGAGGAGCAACGTGGTGATCTATAGGATT +
Preference number: 3 (lower is better)
Translates to: GDWWCCLRNKGC*GQRSNVVIYRI
Trigger: AATCCTATAGATCACCACGTTGCTCCTCTGTCCCCAGCACCCCTTATTTCTTAAGCAGCACCACCAGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCTGGAGCAGTTTCACCTaGTGTACTTCTCAGCATCGT +
Preference number: 3 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSWSSFT*CTSQHR
Trigger: ACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCA...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 72 bp GTCCTTTCTCGGGCTAGCTGCTTCAGTAGGAATCAGTaGTCTGGTACGTGGGGTTTGCTCTTGGTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: VLSRASCFSRNQ*SGTWGLLLVSA
Trigger: TGCAGAAACCAAGAGCAAACCCCACGTACCAGATCACTGATTCCTACTGAAGCAGCTAGCCCGAGAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp TTAACCATCCTTGTCCACTGCTGGGATGGCTCAGGCTaGCAAGTCATTTCCCAAGACCAGTATGAGAGAGTC +
Preference number: 3 (lower is better)
Translates to: LTILVHCWDGSG*QVISQDQYERV
Trigger: GACTCTCTCATACTGGTCTTGGGAAATGACTTGGCAGCCTGAGCCATCCCAGCAGTGGACAAGGATGGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp AGCAGAAAGACTAGATGTTTGGGTGCCTACAACTCCTaGTTCAGGAACTCACCATCTCCAGTCAGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: SRKTRCLGAYNS*FRNSPSPVRLP
Trigger: TGGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAACATCTAGTCTTTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp TATCCTGGACTCTGTGTCTCTCTCTGTTGGGTCTTGTaGCATCACATCAGGCCAAAATTGCCAGACCAGGAC +
Preference number: 3 (lower is better)
Translates to: YPGLCVSLCWVL*HHIRPKLPDQD
Trigger: GTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACCCAACAGAGAGAGACACAGAGTCCAGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 72 bp GACACACCCATGGGACACAGAGATGGTAGAACTAAGTaGCTGTCACCCTGCCATATCCATACCTGTTCCAGA +
Preference number: 3 (lower is better)
Translates to: DTPMGHRDGRTK*LSPCHIHTCSR
Trigger: TCTGGAACAGGTATGGATATGGCAGGGTGACAGTCACTTAGTTCTACCATCTCTGTGTCCCATGGGTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp ACAGGGGCATTTCTACAGCCACAGGGTGCATGGCTGTaGTTAACTGTGTTTTCCATCCTAGTCTGTTCCTGT +
Preference number: 3 (lower is better)
Translates to: TGAFLQPQGAWL*LTVFSILVCSC
Trigger: ACAGGAACAGACTAGGATGGAAAACACAGTTAAGCACAGCCATGCACCCTGTGGCTGTAGAAATGCCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp GTAAGTGAATTACAGAGCAGGTCCAGCTGGCTGCTCTaGCCCTTGGGTATCCATAGTTACGGTTTTCTCTGT +
Preference number: 3 (lower is better)
Translates to: VSELQSRSSWLL*PLGIHSYGFLC
Trigger: ACAGAGAAAACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTCACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp ACATCCACCCAGACAGCTGGATCTCGCTTCACCATGTaGCACTTTCCAGCTCTATCCTACGAAGTTTCAGAA +
Preference number: 3 (lower is better)
Translates to: TSTQTAGSRFTM*HFPALSYEVSE
Trigger: TTCTGAAACTTCGTAGGATAGAGCTGGAAAGTGCCACATGGTGAAGCGAGATCCAGCTGTCTGGGTGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 72 bp ACTTATGTGCCAGCCCAGGCTGAACTAACTACTGTGTaGCTTACTGCCTCAGCTAAAGCTTGCAGCTCAAGA +
Preference number: 3 (lower is better)
Translates to: TYVPAQAELTTV*LTASAKACSSR
Trigger: TCTTGAGCTGCAAGCTTTAGCTGAGGCAGTAAGTCACACAGTAGTTAGTTCAGCCTGGGCTGGCACATAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 72 bp AGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCCTTaGCGGTGGATGTGGATGTCTGGAAAAATCCAAGTG +
Preference number: 3 (lower is better)
Translates to: RFPRNNAFLPSP*RWMWMSGKIQV
Trigger: CACTTGGATTTTTCCAGACATCCACATCCACCGTCAAGGGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGAGGTACTGCAAGCTTTaGGCCAAGGGGCCCAATTCC +
Preference number: 3 (lower is better)
Translates to: SLECTHTLTVRPDENPLLRYCKL*AKGPNS
Trigger: GGAATTGGGCCCCTTGGCCAAAAGCTTGCAGTACCT...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGCACATCAGGCCAAAATaGCCAGACCAGGACCCTAAG +
Preference number: 3 (lower is better)
Translates to: SLECTHTLTVRPDENPLLHIRPK*PDQDPK
Trigger: CTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTG...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR TCA 72 bp TCTCATTTCCCAAGACTTTATCCAATTCTCAGCCACTaGGTAGGGTACCACCTGGGTCCTAGTGTGCTAGAT +
Preference number: 3 (lower is better)
Translates to: SHFPRLYPILSH*VGYHLGPSVLD
Trigger: ATCTAGCACACTAGGACCCAGGTGGTACCCTACTCAGTGGCTGAGAATTGGATAAAGTCTTGGGAAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp TTTCTTTCACACAGGGGCATTTCTACAGCCACAGGGTaGATGGCTGTGCTTAACTGTGTTTTCCATCCTAGT +
Preference number: 3 (lower is better)
Translates to: FLSHRGISTATG*MAVLNCVFHPS
Trigger: ACTAGGATGGAAAACACAGTTAAGCACAGCCATGCACCCTGTGGCTGTAGAAATGCCCCTGTGTGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGCTGTGTCTCTCTCTGTaGGGTCTTGTGGCATCACAT +
Preference number: 3 (lower is better)
Translates to: SLECTHTLTVRPDENPLLLCLSL*GLVASH
Trigger: ATGTGATGCCACAAGACCCAACAGAGAGAGACACAG...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAATTCACTGCCCAGTACTaGTCTCATTTCCCAAGACTT +
Preference number: 3 (lower is better)
Translates to: GKSSMILILYLWIHHGLQFTAQY*SHFPRL
Trigger: AAGTCTTGGGAAATGAGACAAGTACTGGGCAGTGAA...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCATACGAAGTTTCAGAATaGGGCGAAGGCCAGGCGTGG +
Preference number: 3 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAYEVSE*GEGQAW
Trigger: CCACGCCTGGCCTTCGCCCAATTCTGAAACTTCGTA...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR GCA 72 bp GGACAGCGCATTCTGTTGTGCTCTTTGAGCCATTTTTaGAAAGCACGTTTCTCTGTTTTTAGGTACTGCAAG +
Preference number: 3 (lower is better)
Translates to: GQRILLCSLSHF*KARFSVFRYCK
Trigger: CTTGCAGTACCTAAAAACAGAGAAACGTGCTTTGCAAAAATGGCTCAAAGAGCACAACAGAATGCGCTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp TCTGTCAACAGAATTAGGCCGACTGTCAGGTTACCTTaGCAGGGATTCCCTGCAATCAAAAAGATAGATGAT +
Preference number: 3 (lower is better)
Translates to: SVNRIRPTVRLP*QGFPAIKKIDD
Trigger: ATCATCTATCTTTTTGATTGCAGGGAATCCCTGCCAAGGTAACCTGACAGTCGGCCTAATTCTGTTGACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CCA 72 bp TTGGGCAAGAGTTCCATGATTTTGATACTGTACCTTTaGATCCACCATGGGTTGCAACTGTCTTTGGTTTTG +
Preference number: 3 (lower is better)
Translates to: LGKSSMILILYL*IHHGLQLSLVL
Trigger: CAAAACCAAAGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAAAAAGTTGTACTGTTTaGATAGGCAGCTGGCTGGTT +
Preference number: 3 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAKSCTV*IGSWLV
Trigger: AACCAGCCAGCTGCCTATCAAAACAGTACAACTTTT...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTAACATGGCTAAGTATTaGAGAGTGAAAGAAGGGCCT +
Preference number: 3 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCNMAKY*RVKEGP
Trigger: AGGCCCTTCTTTCACTCTCAAATACTTAGCCATGTT...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAGACTCCAGGGATGTTTaGTTGAAAATGTTATTTCTC +
Preference number: 3 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAADSRDV*LKMLFL
Trigger: GAGAAATAACATTTTCAACAAAACATCCCTGGAGTC...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCACATTTCCTAGAAAAGTaGTACTGTTTTGATAGGCAG +
Preference number: 3 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAHFLEK*YCFDRQ
Trigger: CTGCCTATCAAAACAGTACAACTTTTCTAGGAAATG...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR-3UTR CAA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAGGAGAAATAAGTCTCTaGGCCGGTTTAGAATTTTCT +
Preference number: 3 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAGEISL*AGLEFS
Trigger: AGAAAATTCTAAACCGGCCAAGAGACTTATTTCTCC...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCCGGCGGGGTCCTCCGTaGGCCTCCCAGCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLRRGPP*ASQPAR
Trigger: GCGTGCTGGCTGGGAGGCTCACGGAGGACCCCGCCG...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACACACTGCATGCACGTGTaGGCGGGGGTAGGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTHCMHV*AGVGAR
Trigger: GCGCGCGCCTACCCCCGCGCACACGTGCATGCAGTG...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAACGTGGCCCTGCGCCTTaGGGAAGTAGGGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PFSPMLASSGDSLSSWGERGPAP*GSRAGS
Trigger: ACTGCCTGCCCTACTTCCGCAAGGCGCAGGGCCACG...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAAAGGGCCGCGGGCATGTaGATCTTCCACGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PFSPMLASSGDSLSSWGERAAGM*IFHESR
Trigger: GCGGCTCTCGTGGAAGATCCACATGCCCGCGGCCCT...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTAGGCGAAGGCCAGGCGTaGTGGGCTGTGAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLGEGQA*WAVRAT
Trigger: CGTGGCCCTCACAGCCCACCACGCCTGGCCTTCGCC...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAGGCGTGGTGGGCTGTaGGGGCCACGTTACCTCTCG +
Preference number: 4 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLRRGGL*GPRYLS
Trigger: CGAGAGGTAACGTGGCCCTCACAGCCCACCACGCCT...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp AGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGGGTCTGGCAGGGCTGTCATTTGCCAGTaGGAGCCTCCGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSRRRMPLPSRTLRGSGRAVICQ*EPPTGQ
Trigger: CTGCCCTGTCGGAGGCTCTCACTGGCAAATGACAGC...CCTGCCAGACCCACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGGCGGGTGGTTGGTCTTaGCCCGGGACACCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWAGGWS*PGTPAA
Trigger: CGCTGCGGGTGTCCCGGGGCAAGACCAACCACCCGC...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCGCCAGCCCACACTCGTaGCCCGCATGGGCCCCACAT +
Preference number: 4 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLASPHS*PAWAPH
Trigger: ATGTGGGGCCCATGCGGGGCACGAGTGTGGGCTGGC...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAAGGCACCCAGCCTCTGTaGATGGCCTGGGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: PFSPMLASSGDSLSSWGEGTQPL*MAWEGT
Trigger: GGTTCCTTCCCAGGCCATGCACAGAGGCTGGGTGCC...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAAGCAGGTCCAGCTGGCTaGTCTGCCCCTTGGGTATCC +
Preference number: 4 (lower is better)
Translates to: PFSPMLASSGDSLSSWGEAGPAG*SAPWVS
Trigger: GGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGC...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCTCTCAGAGCCTGCGCTaGCCAGGGCCCGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAASQSLR*PGPGHP
Trigger: TGGGTGCCCGGGCCCTGGCCAGCGCAGGCTCTGAGA...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp AGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGGGTCTGGCAGGGTGGGATCGGAGGGCTaGCCCATCTTACAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: SSRRRMPLPSRTLRGSGRVGSEG*PILQVH
Trigger: GTGCACCTGTAAGATGGGCCAGCCCTCCGATCCCAC...CCTGCCAGACCCACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTTCCACGAGAGCCGCTTaGTCCCCGCGAGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTSTRAA*SPRARP
Trigger: AGGACGTGCTCGCGGGGAGCAAGCGGCTCTCGTGGA...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCCCAGACGCGGCCGCGTaGCCAGTACAGCACGCGGCC +
Preference number: 4 (lower is better)
Translates to: SGPSIAAGFHATMLFFPAPDAAA*PVQHAA
Trigger: GGCCGCGTGCTGTACTGGCCACGCGGCCGCGTCTGG...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACAGATCCACCACGGCAGTaGGATCGGAGGGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTDPPRQ*DRRAGP
Trigger: TGGGCCAGCCCTCCGATCCCACTGCCGTGGTGGATC...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGGAAGGCCAGGCGTGGTaGGCTGTGAGGGCCACGTTA +
Preference number: 4 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLEGQAW*AVRATL
Trigger: TAACGTGGCCCTCACAGCCCACCACGCCTGGCCTTC...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGAGGGCGGGTGCAGCTaGTGCACCTGGCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSEGGCS*CTWLTA
Trigger: TGCAGTGAGCCAGGTGCATCAGCTGCACCCGCCCTC...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGCGAGACCCAGGTGACTaGTGGCCATGGACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLRDPGD*WPWTAA
Trigger: AGCAGCAGTCCATGGCCATCAGTCACCTGGGTCTCG...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCCTCAGGGATGTCCTGTaGGGGCAGCCTGAGCCACTA +
Preference number: 4 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGLRDVL*GQPEPL
Trigger: TAGTGGCTCAGGCTGCCCTCACAGGACATCCCTGAG...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAATCCAGGAATGCGCAGTaGAGCGGGTGGTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PFSPMLASSGDSLSSWGESRNAQ*SGWLVL
Trigger: CAAGACCAACCACCCGCTGCACTGCGCATTCCTGGA...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTGGCCCATCTTACAGGTaGACGAGGGGTGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTGPSYR*TRGGRR
Trigger: GCGCCTACCACCCCTCGTGCACCTGTAAGATGGGCC...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCAGCCGGCCTGCTGCGTaGCCTCCAGGAATGCGCAGT +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAASRPAA*PPGMRS
Trigger: ACTGCGCATTCCTGGAGGCCACGCAGCAGGCCGGCT...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCGGTGCGGCTCAGTGCTaGGTGCAGGTAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAAGAAQC*VQVGTG
Trigger: GCCTGTGCCTACCTGCACCCAGCACTGAGCCGCACC...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTCGTAGACCATGGCATTaGGGGATGAGGAGCCACCCC +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTRRPWH*GMRSHP
Trigger: GGGGTGGCTCCTCATCCCTCAATGCCATGGTCTACG...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp AGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGGGTCTGGCAGGTCCTCCTGGGGTGAATaGAAGACTCCCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: SSRRRMPLPSRTLRGSGRSSWGE*KTPFMA
Trigger: TGCCATGAAGGGAGTCTTTCATTCACCCCAGGAGGA...CCTGCCAGACCCACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCGCTGGCTTCCTCAGGTaGCAGCCTCTCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSAGFLR*QPLLLG
Trigger: CCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGC...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCCAGCCGAAGCCCTCCTaGTGGAAGCCATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGQPKPS*WKPFMS
Trigger: GGACATGAATGGCTTCCAGCAGGAGGGCTTCGGCTG...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACAGTTGGTGCGGCTCAGTaGTGGGTGCAGGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTVGAAQ*WVQVGT
Trigger: TGTGCCTACCTGCACCCAGCACTGAGCCGCACCAAC...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCCGCCCACTGCACGGGTaGCCTCAAATAGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAARPLHG*PQIAPC
Trigger: GCAGGGTGCTATTTGAGGGCACCCGTGCAGTGGGCG...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCTGGGAGCAAGGGCTGTaGTGGCCCTCTTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGWEQGL*WPSWLI
Trigger: GATAAGCCAAGAGGGCCAGCACAGCCCTTGCTCCCA...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGACCATCCTTGTCCACTaGTGGGATGGCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLTILVH*WDGSGC
Trigger: GCAGCCTGAGCCATCCCAGCAGTGGACAAGGATGGT...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTTCTCTGCGTCCGGAATaGGGACGCAGCAGTTCCGAC +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTSLRPE*GRSSSD
Trigger: GTCGGAACTGCTGCGTCCCCATTCCGGACGCAGAGA...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAAGGCTGGATCACAGGGTaGTCTTGGGGATTGGCACTT +
Preference number: 4 (lower is better)
Translates to: PFSPMLASSGDSLSSWGEGWITG*SWGLAL
Trigger: AAGTGCCAATCCCCAAGACCACCCTGTGATCCAGCC...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCGGGTGGCCAGCGTCCTaGGCTTGTAGACAGGGACAT +
Preference number: 4 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLGWPAS*ACRQGH
Trigger: ATGTCCCTGTCTACAAGCCCAGGACGCTGGCCACCC...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTATGTCTTAGCGCTGGGTaGCCAGCGTCCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLCLSAG*PASWAC
Trigger: ACAAGCCCAGGACGCTGGCCACCCAGCGCTAAGACA...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTCTGTGCTGGCCCTCTTaGCTTATCAGGGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRLCWPS*LIRGLP
Trigger: GGGAAGCCCCCTGATAAGCCAAGAGGGCCAGCACAG...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTAGGCTCTGGCCATTCTTaGCATACTCCACGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLGSGHS*HTPRPL
Trigger: CAGTGGGCGTGGAGTATGTCAAGAATGGCCAGAGCC...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCGCAGCTGTGGAGAGTTaGTGGCACCTCCACTCAGAA +
Preference number: 4 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGAAVES*WHLHSE
Trigger: TTCTGAGTGGAGGTGCCATCAACTCTCCACAGCTGC...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGCAGGGGCTTCTGTGCTaGATGGAGGGTGATAGGGCG +
Preference number: 4 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWQGLLC*MEGDRA
Trigger: CGCCCTATCACCCTCCATTCAGCACAGAAGCCCCTG...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCGCCACTCCAGACCAATaGAGACCTTCCGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAAATPDQ*RPSAGA
Trigger: AGCCCCTGCGGAAGGTCTGCATTGGTCTGGAGTGGC...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTCTGTTTCTGCACTCTTaGAGGCAGCCCCGAGACCCA +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRLFLHS*RQPRDP
Trigger: TGGGTCTCGGGGCTGCCTGCAAGAGTGCAGAAACAG...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAACTCAGCCTTGCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PFSPMLASSGDSLSSWGELSLAK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGCAAGGCTGAG...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTACCAGGGGCACCACTTaGTTTCCTGCTGACCCTGCT +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRTRGTT*FPADPA
Trigger: AGCAGGGTCAGCAGGAAAGCAAGTGGTGCCCCTGGT...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAAGAATCACCTCCTTGCTaGCATAAGCCCTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PFSPMLASSGDSLSSWGEESPPC*HKPCGS
Trigger: AGAGCCACAGGGCTTATGCCAGCAAGGAGGTGATTC...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTTGGTCTTGCAGGTTCTaGCCAACCCCAGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTWSCRF*PTPGRW
Trigger: CCACCTACCTGGGGTTGGCCAGAACCTGCAAGACCA...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGGCTTCTGTGCTGAATaGAGGGTGATAGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRGFCAE*RVIGRV
Trigger: CACCCGCCCTATCACCCTCCATTCAGCACAGAAGCC...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGGGCAGGAAATGGAACTaGATGTCCGGGTGGGGGACC +
Preference number: 4 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWGRKWN*MSGWGT
Trigger: GGTCCCCCACCCGGACATCCAGTTCCATTTCCTGCC...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGTGGGATGGCAGGAAATaGAACTGGATGTCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLWDGRK*NWMSGW
Trigger: CCACCCGGACATCCAGTTCCATTTCCTGCCATCCCA...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCCACTCGTGCCCCGCATaGGCCCCACATGTACCTGGT +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSHSCPA*APHVPG
Trigger: ACCAGGTACATGTGGGGCCCATGCGGGGCACGAGTG...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp AGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGGGTCTGGCAGGATCACAGGGTGGTCTTaGGGATTGGCACTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SSRRRMPLPSRTLRGSGRITGWS*GLALLS
Trigger: ACTGAGAAGTGCCAATCCCCAAGACCACCCTGTGAT...CCTGCCAGACCCACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 72 bp TGGCACTTTCCAGCTCTATCCTACGAAGTTTCAGAATaGGGCGAAGGCCAGGCGTGGTGGGCTGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: WHFPALSYEVSE*GEGQAWWAVRA
Trigger: GGCCCTCACAGCCCACCACGCCTGGCCTTCGCCCAATTCTGAAACTTCGTAGGATAGAGCTGGAAAGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCTGGCACTTCTCAGTTTaGGCCAGCCCACACTCGTGC +
Preference number: 4 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSWHFSV*ASPHSC
Trigger: GCACGAGTGTGGGCTGGCTCAAACTGAGAAGTGCCA...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTACCAATTCTCAGCCACTaGGTAGGGTACCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLPILSH*VGYHLG
Trigger: ACCCAGGTGGTACCCTACTCAGTGGCTGAGAATTGG...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCATACAGCCACCAGACTaGACCCACCATGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGIQPPD*THHGLR
Trigger: TCTGAGACCATGGTGGGTTCAGTCTGGTGGCTGTAT...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCCCTCTCCTCCTGGGGTaGATGAAAGACTCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGPLLLG*MKDSLH
Trigger: ATGAAGGGAGTCTTTCATTCACCCCAGGAGGAGAGG...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTAGTCAGCTGCCTTCTCTaGGATCATGATTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLVSCLL*DHDCGG
Trigger: GCCCCCACAATCATGATCGCAGAGAAGGCAGCTGAC...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCCTGGGAAGGAACCACTaGCCTGGGTTAGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLLGRNH*PGLENA
Trigger: GGCATTCTCTAACCCAGGGCAGTGGTTCCTTCCCAG...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTCTCCAGCAGGAAAGCTaGACGAGGCCCTCCAAGTTA +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTLQQES*TRPSKL
Trigger: TAACTTGGAGGGCCTCGTGCAGCTTTCCTGCTGGAG...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTTGCCTTTCTCCCCCATaGTGGCTTCCTCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRCLSPP*WLPQVT
Trigger: TGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGGCA...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCCCACTTTGTAGCAAGTaGCTTTCTCCCCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGPLCSK*LSPPCW
Trigger: CCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGG...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGCCGAAGCCCTCCTGCTaGAAGCCATTCATGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWPKPSC*KPFMSS
Trigger: CGAGGACATGAATGGCTTCCAGCAGGAGGGCTTCGG...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAACTGTTGACAAGTAGTTaGGCTGGATCACAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PFSPMLASSGDSLSSWGELLTSS*AGSQGG
Trigger: ACCACCCTGTGATCCAGCCCAACTACTTGTCAACAG...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTACCCACAGGGAAAGGCTaGGGAAAAGGAGCTGGATTC +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLPTGKG*GKGAGF
Trigger: GAATCCAGCTCCTTTTCCCCAGCCTTTCCCTGTGGG...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGCTCAGAGTGACCCAGTaGAGCCCCAGTTACCTGCCT +
Preference number: 4 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWLRVTQ*SPSYLP
Trigger: AGGCAGGTAACTGGGGCTCCACTGGGTCACTCTGAG...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTATGTCCACTGCTGGGATaGCTCAGGCTGCCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLCPLLG*LRLPSH
Trigger: ATGACTTGGCAGCCTGAGCCATCCCAGCAGTGGACA...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTATCCTTGTCCACTGCTaGGATGGCTCAGGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTILVHC*DGSGCQ
Trigger: TTGGCAGCCTGAGCCATCCCAGCAGTGGACAAGGAT...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGAAACCACTTCTGAGTaGCGGGACATGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRETTSE*RDMVGW
Trigger: CCACCCAACCATGTCCCGCCACTCAGAAGTGGTTTC...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTAATGAGGAGCAGGCCTaGGCCCTGGTTCCAACATCA +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTNEEQA*ALVPTS
Trigger: TGATGTTGGAACCAGGGCCCAGGCCTGCTCCTCATT...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTATCCACGGAGGGGAATaGGATGACTCACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRIHGGE*DDSLLP
Trigger: AGGGAGAAGTGAGTCATCTCATTCCCCTCCGTGGAT...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGGATGCCCAGTTTCTTaGGGTCATCAGCATTCCCGA +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRGCPVS*GHQHSR
Trigger: TCGGGAATGCTGATGACCTCAAGAAACTGGGCATCC...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTAGGAACATCTCAGGCTaGATGCTGGCCTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRRNISG*MLAFPK
Trigger: TTTGGGGAAGGCCAGCATTCAGCCTGAGATGTTCCT...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTATGTGCCAGCCCAGGCTaGACTAACTACTGTGTGACT +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLCASPG*TNYCVT
Trigger: AGTCACACAGTAGTTAGTTCAGCCTGGGCTGGCACA...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAAGCCCCGCGCGCTCTCTaGGTCCGGAATGGGGACGCA +
Preference number: 4 (lower is better)
Translates to: GKSSMILILYLWIHHGLQAPRAL*VRNGDA
Trigger: TGCGTCCCCATTCCGGACGCAGAGAGCGCGCGGGGC...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGCCTCAAATAGCACCCTaGTCACAAGCGTCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWPQIAP*SQASRP
Trigger: AGGCCGAGACGCTTGTGAGCAGGGTGCTATTTGAGG...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTGATAGGGCGGGTGCATaGCTGCTGAATGTAGATCTC +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTDRAGA*LLNVDL
Trigger: GAGATCTACATTCAGCAGGCATGCACCCGCCCTATC...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTATACAGGTGTGAGCCCTaGACCTGGCCCTGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLYRCEP*TWPWFN
Trigger: ATTAAACCAGGGCCAGGTGCAGGGCTCACACCTGTA...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp AGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGGGTCTGGCAGGTCTGTTTTTAGGTACTaGAAGCTTTTGGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: SSRRRMPLPSRTLRGSGRSVFRY*KLLAKG
Trigger: CCCCTTGGCCAAAAGCTTGCAGTACCTAAAAACAGA...CCTGCCAGACCCACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCAGTCAGGCTGCCAGATaGTCTTGGCTCCCACACAGC +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSSQAAR*SWLPHS
Trigger: GCTGTGTGGGAGCCAAGAGCATCTGGCAGCCTGACT...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGTCACCCAGGGTGGAGTaGAGTGGTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWSPRVE*SGAILA
Trigger: AGCCAAGATTGCACCACTGCACTCCACCCTGGGTGA...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCATGTGGCTTCCTGGCTaGAGCTCTTTCCCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAAMWLPG*SSFPRN
Trigger: GTTCCGAGGGAAAGAGCTCCAGCCAGGAAGCCACAT...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGCTGAATGTGGCTTCCTaGCTGGAGCTCTTTCCCTCG +
Preference number: 4 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWLNVAS*LELFPS
Trigger: CGAGGGAAAGAGCTCCAGCCAGGAAGCCACATTCAG...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGCTGGGGAAAAGGAGCTaGATTCACTGCCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLLGKRS*IHCPVL
Trigger: AAGTACTGGGCAGTGAATCCAGCTCCTTTTCCCCAG...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCTGTGAGCCCTGCACCTaGCCCTGGTTTAATAAGAAC +
Preference number: 4 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGCEPCT*PWFNKN
Trigger: GTTCTTATTAAACCAGGGCCAGGTGCAGGGCTCACA...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTTCCAAGTTACGGGGCTaGCACCTGAACTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTSKLRG*HLNSCF
Trigger: GAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGA...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCGGGTCAGCACAGTCATaGTTGGTCCAGGACTATCCC +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAAGSAQS*LVQDYP
Trigger: GGGATAGTCCTGGACCAACCATGACTGTGCTGACCC...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCCTTTCTCCCCCATGCTaGCTTCCTCAGGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSLSPPC*LPQVTA
Trigger: GGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAG...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTAGAGCACTGGGCACATaGACAGCGCATTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRRALGT*TAHSVV
Trigger: CACAACAGAATGCGCTGTCCATGTGCCCAGTGCTCT...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCACGAAGTTTCAGAATTaGGCGAAGGCCAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLTKFQN*AKARRG
Trigger: ACCACGCCTGGCCTTCGCCCAATTCTGAAACTTCGT...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTGGCTGCTCTGCCCCTTaGGTATCCATAGTTACGGTT +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTGCSAP*VSIVTV
Trigger: AACCGTAACTATGGATACCCAAGGGGCAGAGCAGCC...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCTGGCTCCCTCCCCTGTaGATTTCCAGAGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: SGPSIAAGFHATMLFFPAWLPPL*ISRATP
Trigger: TGGAGTGGCTCTGGAAATTCACAGGGGAGGGAGCCA...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCTTCCCAAGACCAGTATaGGAGAGTCCTTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAAFPRPV*ESPFSG
Trigger: GCCCGAGAAAGGACTCTCTCATACTGGTCTTGGGAA...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp AGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGGGTCTGGCAGGCAGGTTCTGGACATGTaGCACTTACCATCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SSRRRMPLPSRTLRGSGRQVLDM*HLPSFL
Trigger: AAGAAAAGATGGTAAGTGTCACATGTCCAGAACCTG...CCTGCCAGACCCACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCATCTCCAGGTGGTCTTaGAGGTTCTGGCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSISRWS*RFWPTP
Trigger: TGGGGTTGGCCAGAACCTGCAAGACCACCTGGAGAT...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCTCCCAGAGTGCAGGCTaGCCCTTGATAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAASQSAG*PLIMSA
Trigger: AGCTGACATTATCAAGGGGCAGCCTGCACTCTGGGA...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCGCTCAAGAAGGAGGATaGCCCTTCCTTCGCGAACCC +
Preference number: 4 (lower is better)
Translates to: SGPSIAAGFHATMLFFPAAQEGG*PFLREP
Trigger: GGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGC...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCGGAGCCCCAGTTACCTaGCTCACTCTGAGAGTGAAA +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAAGAPVT*LTLRVK
Trigger: TTTCACTCTCAGAGTGAGGCAGGTAACTGGGGCTCC...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGCTGGTACGTGGGGTTTaGTCTTGGTTTCTGCATTTC +
Preference number: 4 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLLVRGV*SWFLHF
Trigger: GAAATGCAGAAACCAAGAGCAAACCCCACGTACCAG...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCTGGGATGGCTCAGGCTaGCAAGTCATTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAAWDGSG*QVISQD
Trigger: GTCTTGGGAAATGACTTGGCAGCCTGAGCCATCCCA...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCTGGGTTTCTTCCTGCTaGCTCTCTCGAAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGWVSSC*LSRRFF
Trigger: GAAAAACCTTCGAGAGAGGCAGCAGGAAGAAACCCA...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACATATTCCATCAGGAGCTaGCTTCTACTAGTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTYSIRS*LLLVQR
Trigger: CCGCTGCACTAGTAGAAGGCAGCTCCTGATGGAATA...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTGGTGCCTACAACTCCTaGTTCAGGAACTCACCATCT +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTGAYNS*FRNSPS
Trigger: AGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACC...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCACTGGCGCCCAGCTCGTaGCCCTGCGCCTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAALAPSS*PCALRK
Trigger: CTTCCGCAAGGCGCAGGGCCACGAGCTGGGCGCCAG...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAAGCGCAGTGCAGCGGGTaGTTGGTCTTGCCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: GKSSMILILYLWIHHGLQAQCSG*LVLPRD
Trigger: GTCCCGGGGCAAGACCAACCACCCGCTGCACTGCGC...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTCACCGTTTGCCTTCATaGATGGTCATGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRHRLPS*MVMSIQ
Trigger: CTGGATGGACATGACCATCCATGAAGGCAAACGGTG...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACACCGTGGTCAATCACTTaGGATGGCAGGAAATGGAAC +
Preference number: 4 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTPWSIT*DGRKWN
Trigger: GTTCCATTTCCTGCCATCCCAAGTGATTGACCACGG...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCTCTCAACAGGGACACTaGGGACTTATGTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSSQQGH*GLMCQP
Trigger: GGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGA...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCCCCTGCACCTGGCCCTaGTTTAATAAGAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAAPCTWP*FNKNQS
Trigger: GCTCTGGTTCTTATTAAACCAGGGCCAGGTGCAGGG...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTCAGCCACAGGGTGCATaGCTGTGCTTAACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTQPQGA*LCLTVF
Trigger: AAACACAGTTAAGCACAGCCATGCACCCTGTGGCTG...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCGATCCGAGCAAAGCCTaGAATCCCCCAATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAADPSKA*NPPISS
Trigger: GGAGGAAATTGGGGGATTCCAGGCTTTGCTCGGATC...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTAGACTGAACCCACCATaGTCTCAGACACTGACACAC +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRRLNPP*SQTLTH
Trigger: GTGTGTCAGTGTCTGAGACCATGGTGGGTTCAGTCT...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTAGTGAAAGAAGGGCCTaGGTGCAATTGAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRSERRA*VQLSSI
Trigger: GATGCTGCTCAATTGCACCCAGGCCCTTCTTTCACT...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 72 bp TTATACTTGGGAGTGCTCCTTGCACAGAGCTGTCATTaGCCAGTGAGAGCCTCCGACAGGGCAGGTACTGTG +
Preference number: 4 (lower is better)
Translates to: LYLGVLLAQSCH*PVRASDRAGTV
Trigger: CACAGTACCTGCCCTGTCGGAGGCTCTCACTGGCAAATGACAGCTCTGTGCAAGGAGCACTCCCAAGTATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 72 bp GAATTACAGAGCAGGTCCAGCTGGCTGCTCTGCCCCTaGGGTATCCATAGTTACGGTTTTCTCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ELQSRSSWLLCP*GIHSYGFLCGP
Trigger: TGGGCCACAGAGAAAACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTGTAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCCTAGTCCAAGTCCTCTaGTCCACGGAGGGGAATGAG +
Preference number: 4 (lower is better)
Translates to: SGPSIAAGFHATMLFFPALVQVL*STEGNE
Trigger: CTCATTCCCCTCCGTGGATCAGAGGACTTGGACTAG...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAATCTCGGCCTCGGCCTTaGGGTTGGTGCGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GKSSMILILYLWIHHGLQSRPRP*GWCGSV
Trigger: CACTGAGCCGCACCAACCTCAAGGCCGAGGCCGAGA...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTAGAGGAGCAACGTGGTaGTCTATAGGATTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRRGATW*SIGLEC
Trigger: ACACTCCAATCCTATAGATCACCACGTTGCTCCTCT...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCTCAGAATCACCTCCTTaGTGGCATAAGCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSSESPP*WHKPCG
Trigger: GCCACAGGGCTTATGCCAGCAAGGAGGTGATTCTGA...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCCGTGGAGATGATGCCTaGAACCTTCGCTACAAGCAG +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSRGDDA*NLRYKQ
Trigger: CTGCTTGTAGCGAAGGTTGCAGGCATCATCTCCACG...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACAACATCAGGCCAAAATTaGCAGACCAGGACCCTAAGT +
Preference number: 4 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTTSGQN*QTRTLS
Trigger: ACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGT...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAATTCGCGAACCCTCCGTaGGTCTGGCAGGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: GKSSMILILYLWIHHGLQFANPP*VWQAPS
Trigger: GCTGGGTGCCTGCCAGACCCACGGAGGGTTCGCGAA...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGTCTCGCTTCACCATGTaGCACTTTCCAGCTCTATCC +
Preference number: 4 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWSRFTM*HFPALS
Trigger: GGATAGAGCTGGAAAGTGCCACATGGTGAAGCGAGA...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACATCCTCTGGGGACTGGTaGTGCTGCTTAAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTSSGDW*CCLRNK
Trigger: CTTATTTCTTAAGCAGCACCACCAGTCCCCAGAGGA...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCTTGTCCTCTGGGGACTaGTGGTGCTGCTTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLLSSGD*WCCLRN
Trigger: ATTTCTTAAGCAGCACCACCAGTCCCCAGAGGACAA...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 72 bp CTCTGTTGGGTCTTGTGGCATCACATCAGGCCAAAATaGCCAGACCAGGACCCTAAGTGTCTGATAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LCWVLWHHIRPK*PDQDPKCLIEA
Trigger: CGCCTCTATCAGACACTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTGATGCCACAAGACCCAACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCCCTCACATCCAGAAGTaGCAGGATACGGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: SGPSIAAGFHATMLFFPAPHIQK*QDTVHS
Trigger: AGAGTGCACCGTATCCTGTCACTTCTGGATGTGAGG...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTCAAAAATTTCTCTGGTaGGCTTCACACACAGACGGA +
Preference number: 4 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRQKFLW*ASHTDG
Trigger: TCCGTCTGTGTGTGAAGCTCACCAGAGAAATTTTTG...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp AGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGGGTCTGGCAGGATCTCAGTTCAAATGTaGGTGACTGGATCACTTTAT +
Preference number: 4 (lower is better)
Translates to: SSRRRMPLPSRTLRGSGRISVQM*VTGSLY
Trigger: ATAAAGTGATCCAGTCACTCACATTTGAACTGAGAT...CCTGCCAGACCCACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCTTTCTTCCCAGCCCTTaGCGGTGGATGTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: SGPSIAAGFHATMLFFPAFLPSP*RWMWMS
Trigger: AGACATCCACATCCACCGTCAAGGGCTGGGAAGAAA...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCTTGAATTCGTGGAGATaGTGCCTGCAACCTTCGCTA +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAALNSWR*CLQPSL
Trigger: TAGCGAAGGTTGCAGGCATCATCTCCACGAATTCAA...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAACAAGAAGAATCTATTTaGATTCGTGGAGATGATGCC +
Preference number: 4 (lower is better)
Translates to: PFSPMLASSGDSLSSWGEQEESI*IRGDDA
Trigger: GGCATCATCTCCACGAATTCAAATAGATTCTTCTTG...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACATGTAAATGGCAGCTATaGTTTCACCGTCAACTGGCA +
Preference number: 4 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTCKWQL*FHRQLA
Trigger: TGCCAGTTGACGGTGAAATCATAGCTGCCATTTACA...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTAATGCACTCACACTCTaGCTGTACGTCCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTNALTL*LYVLMK
Trigger: TTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATT...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCGTAGGAGACACCACATaGTTCTATCTAGTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLVGDTT*FYLVQV
Trigger: GACTTGGACTAGATAGAAGCATGTGGTGTCTCCTAC...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCATCTTTGTCCCAGAGTaGAGGCTGCCCCTTGATAAT +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAAIFVPE*RLPLDN
Trigger: ATTATCAAGGGGCAGCCTGCACTCTGGGACAAAGAT...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCAGGAGCTGGATTCACTaGCCAGTACTTGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLRSWIH*PVLVSF
Trigger: AAATGAGACAAGTACTGGGCAGTGAATCCAGCTCCT...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCCCCTGGGTTAGAGAATaGCACGTGAACACAAGAAAA +
Preference number: 4 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLPWVRE*HVNTRK
Trigger: TTTTCTTGTGTTCACGTGGCATTCTCTAACCCAGGG...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCAGGTGTGTACCACCATaGCCAGCTAATTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLRCVPP*PANCFP
Trigger: TGGAAAACAATTAGCTGGGCATGGTGGTACACACCT...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCCAGCGCATTCTGTTGTaGTCTTTGAGCCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLQRILL*SLSHFC
Trigger: GCAAAAATGGCTCAAAGAGCACAACAGAATGCGCTG...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAGCCGCGAGGCTAGCTaGGCTCCAGCGGAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWASREAS*APAEAR
Trigger: GCGCGCCTCCGCTGGAGCCCAGCTAGCCTCGCGGCT...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTTGTCGTCGCACAGGTTaGCCACCAGGGCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCCRRTG*PPGPRA
Trigger: TGCCCGCGGCCCTGGTGGCCAACCTGTGCGACGACA...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAAACTGGATGTCCGGGTaGGGGACCCCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAANWMSG*GTPGWL
Trigger: CAGCCAGCCTGGGGTCCCCCACCCGGACATCCAGTT...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACTGCTGTGGGGCAGGTaGGGACCCTCCGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GKSSMILILYLWIHHGLQLLWGR*GPSVGE
Trigger: TTCTCCTACGGAGGGTCCCCACCTGCCCCACAGCAG...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGCCTCATTCCTGTTTATaGCCAAATTGTGCGATTGTG +
Preference number: 4 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLPHSCL*PNCAIV
Trigger: CACAATCGCACAATTTGGCCATAAACAGGAATGAGG...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCCTGAGTGGCGGGACATaGTTGGGTGGAGAAGAATCT +
Preference number: 4 (lower is better)
Translates to: SGPSIAAGFHATMLFFPALSGGT*LGGEES
Trigger: AGATTCTTCTCCACCCAACCATGTCCCGCCACTCAG...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCGCAGAAATGCATAGGTaGATGAGATATAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGAEMHR*MRYSCS
Trigger: AGAGCAGCTATATCTCATCCACCTATGCATTTCTGC...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCACATTCATGTCCTCGGTaGGCGGGTAGCCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAHSCPR*AGSRPA
Trigger: AGCAGGCCGGCTACCCGCTCACCGAGGACATGAATG...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCTTAAAAGGAGAGGTGTaGTGGGTTTCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSLKGEV*WVSSCC
Trigger: GCAGCAGGAAGAAACCCATCACACCTCTCCTTTTAA...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCGATGGTAGAACTAAGTaGCTGTCACCCTGCCATATC +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSDGRTK*LSPCHI
Trigger: GATATGGCAGGGTGACAGTCACTTAGTTCTACCATC...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAAAGAGCCCCGACTCCCTaGTTAGCCCACCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: GKSSMILILYLWIHHGLQRAPTP*LAHPNS
Trigger: TGAGTTGGGGTGGGCTAATCAGGGAGTCGGGGCTCT...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTAAAATGCATAGGTGGATaGGATATAGCTGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLKCIGG*DIAALV
Trigger: GACAAGAGCAGCTATATCTCATCCACCTATGCATTT...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGAACTAACTTTGGTTTTGTTTGTTTaGCTTGAACCACCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PLSTGTLGTYVPAQAELTLVLFV*LEPPSG
Trigger: ACCAGAGGGTGGTTCAAGTCAAACAAACAAAACCAA...AGTTAGTTCAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAATGGCCATGGACTGCTaGTGTGGGGCAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAMAMDC*CGAGGD
Trigger: GTCCCCACCTGCCCCACAGCAGCAGTCCATGGCCAT...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCTTTTATACTTGGGAGTaGTCCTTGCACAGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAAFYTWE*SLHRAV
Trigger: GACAGCTCTGTGCAAGGAGCACTCCCAAGTATAAAA...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGGATCCACCATGGGTTaGAACTGTCTTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSGSTMG*NCLWFC
Trigger: ACAAAACCAAAGACAGTTGCAACCCATGGTGGATCC...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTAGTGCAGCGGGTGGTTaGTCTTGCCCCGGGACACCC +
Preference number: 4 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCSAAGG*SCPGTP
Trigger: GGGTGTCCCGGGGCAAGACCAACCACCCGCTGCACT...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTAAGCCTCCTGCTGGGTaGGGACCCGCCCGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCKPPAG*GPARGQ
Trigger: TTGACCACGGGCGGGTCCCCACCCAGCAGGAGGCTT...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGGTGGATGTGGATGTCTaGAAAAATCCAAGTGCATTT +
Preference number: 4 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLVDVDV*KNPSAF
Trigger: AAATGCACTTGGATTTTTCCAGACATCCACATCCAC...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGCTGCCAGATGCTCTTaGCTCCCACACAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: SLECTHTLTVRPDENPLLAARCS*LPHSPP
Trigger: GGGTGGGCTGTGTGGGAGCCAAGAGCATCTGGCAGC...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGATATTCTTATCCTCCTaGTTCCTTCGGTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWIFLSS*FLRCQW
Trigger: CCATTGGCACCGAAGGAACCAGGAGGATAAGAATAT...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCACTGTCAGGTTACCTTaGCAGGGATTCCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: SGPSIAAGFHATMLFFPATVRLP*QGFPAI
Trigger: GATTGCAGGGAATCCCTGCCAAGGTAACCTGACAGT...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTATTGATACTGTACCTTTaGATCCACCATGGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLLILYL*IHHGLQ
Trigger: TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAA...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCGTTTCCACGCAACAATaGTTTTCTTCCCAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SGPSIAAGFHATMLFFPAVSTQQ*FSSQPL
Trigger: CAAGGGCTGGGAAGAAAAGCATTGTTGCGTGGAAAC...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTGTGGGGACCCGCCCGTaGTCAATCACTTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCVGTRP*SITWDG
Trigger: GCCATCCCAAGTGATTGACCACGGGCGGGTCCCCAC...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAAGCTGCTCTTGTCCTCTaGGGACTGGTGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GKSSMILILYLWIHHGLQAALVL*GLVVLL
Trigger: AAGCAGCACCACCAGTCCCCAGAGGACAAGAGCAGC...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTCAGAGCAGGTCCAGCTaGCTGCTCTGCCCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCQSRSS*LLCPLG
Trigger: ACCCAAGGGGCAGAGCAGCCAGCTGGACCTGCTCTG...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 72 bp GGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTaGGCCGGTTTAGAATTTTCTTTCTTGACCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GRWGPSVGEISL*AGLEFSFLTLS
Trigger: AGAGAGGGTCAAGAAAGAAAATTCTAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGCAGGCTGGCTGCGGATaGACCCACCTGTTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLECTHTLTVRPDENPLLQAGCG*THLFPD
Trigger: ATCTGGAAACAGGTGGGTTCATCCGCAGCCAGCCTG...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCAATATCAGTTTCTGTTaGCAAGTAGTTGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSNISFC*QVVGLD
Trigger: ATCCAGCCCAACTACTTGTCAACAGAAACTGATATT...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTAGGCATCGACGACCCTaGGGTTTTCCACCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCRHRRP*GFPPRG
Trigger: TCCTCGGGGTGGAAAACCTCAGGGTCGTCGATGCCT...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCTTAGAGAATGCCACGTaGACACAAGAAAAAGGATGC +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSLENAT*TQEKGC
Trigger: GCATCCTTTTTCTTGTGTTCACGTGGCATTCTCTAA...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTACAGTTCAAATGTGAGTaGCTGGATCACTTTATTGAA +
Preference number: 4 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLQFKCE*LDHFIE
Trigger: TTCAATAAAGTGATCCAGTCACTCACATTTGAACTG...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAGCCCCGAGACCCAGGTaGCTGATGGCCATGGACTGC +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAAPRPR*LMAMDC
Trigger: GCAGTCCATGGCCATCAGTCACCTGGGTCTCGGGGC...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACAGCTTTTATATGCAATTaGATGAGGGCTGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTAFICN*MRAEVF
Trigger: GAAAACTTCAGCCCTCATTCAATTGCATATAAAAGC...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCCTTGATAATGTCAGCTaGCTTCTCTGCGATCATGAT +
Preference number: 4 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSLDNVS*LLCDHD
Trigger: ATCATGATCGCAGAGAAGGCAGCTGACATTATCAAG...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCTCAAATGTGAGTGACTaGATCACTTTATTGAATGGT +
Preference number: 4 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGSNVSD*ITLLNG
Trigger: ACCATTCAATAAAGTGATCCAGTCACTCACATTTGA...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGCTCACCTGTGTGAGATaGGACCAGGGGCACCACTTG +
Preference number: 4 (lower is better)
Translates to: SLECTHTLTVRPDENPLLLTCVR*DQGHHL
Trigger: CAAGTGGTGCCCCTGGTCCCATCTCACACAGGTGAG...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 72 bp CAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCCTaGACGGTGGATGTGGATGTCTGGAAAAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: QVSTQQCFSSQP*TVDVDVWKNPS
Trigger: ACTTGGATTTTTCCAGACATCCACATCCACCGTCAAGGGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCACCTTCTCTGCGATCATaGTTGTGGGGGCGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAPSLRS*LWGRSG
Trigger: ACCTGAACGCCCCCACAATCATGATCGCAGAGAAGG...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGCATGGTCTCAGACACTaGCACACCCATGGGACACAG +
Preference number: 4 (lower is better)
Translates to: SLECTHTLTVRPDENPLLHGLRH*HTHGTQ
Trigger: CTGTGTCCCATGGGTGTGTCAGTGTCTGAGACCATG...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAATGCACCTGGCTCACTaGATGCACGTGTGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAMHLAH*MHVCAG
Trigger: CCCCGCGCACACGTGCATGCAGTGAGCCAGGTGCAT...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCACCGAGGACCCTTGTCTaGGGATCCACCACGGCAGTG +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAPRTLV*GSTTAV
Trigger: CACTGCCGTGGTGGATCCGCAGACAAGGGTCCTCGG...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAAACATCTCAGGCTGAATaGTGGCCTTCCCCAAATGGC +
Preference number: 4 (lower is better)
Translates to: GKSSMILILYLWIHHGLQTSQAE*WPSPNG
Trigger: GCCATTTGGGGAAGGCCAGCATTCAGCCTGAGATGT...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAGAGCATGAGCAGCTGTaGAGAGTTGATGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAEHEQL*RVDGTS
Trigger: GGAGGTGCCATCAACTCTCCACAGCTGCTCATGCTC...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAACCCTCCGTGGGTCTaGCAGGCACCCAGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWANPPWV*QAPSLC
Trigger: ACAGAGGCTGGGTGCCTGCCAGACCCACGGAGGGTT...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCACTTGGGAGTGCTCCTTaGACAGAGCTGTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAALGSAP*TELSFA
Trigger: GGCAAATGACAGCTCTGTGCAAGGAGCACTCCCAAG...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCAAGTTTTCATTAGAATaGACTCACACTCTGACTGTA +
Preference number: 4 (lower is better)
Translates to: FGCLQLLLQELTISSQAAKFSLE*THTLTV
Trigger: TACAGTCAGAGTGTGAGTGCATTCTAATGAAAACTT...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTTCCAGCTGGCTGCTCTaGCCCTTGGGTATCCATAGT +
Preference number: 4 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCSSWLL*PLGIHS
Trigger: ACTATGGATACCCAAGGGGCAGAGCAGCCAGCTGGA...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGAAAGACTCCCTTCATaGCAGGGGAACGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: SLECTHTLTVRPDENPLLERLPS*QGNAQV
Trigger: AACCTGAGCGTTCCCCTGCCATGAAGGGAGTCTTTC...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCATACGGGGCTGGCACCTaGACTCCTGTTTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAYGAGT*TPVSAL
Trigger: GAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTA...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCACATCTCCAGTCAGGCTaGCAGATGCTCTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAHLQSG*QMLLAP
Trigger: GGGAGCCAAGAGCATCTGGCAGCCTGACTGGAGATG...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAATCAGGGGGCTTCCCTaGTCATCCTCCAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAIRGLP*SSSSSN
Trigger: GTTGCTGCTGGAGGATGACCAGGGAAGCCCCCTGAT...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAAGGAACGCTCAGGTTCTaGACATGTGACACTTACCAT +
Preference number: 4 (lower is better)
Translates to: GKSSMILILYLWIHHGLQGTLRF*TCDTYH
Trigger: ATGGTAAGTGTCACATGTCCAGAACCTGAGCGTTCC...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGGTGGCGGGACATGGTTaGGTGGAGAAGAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: SLECTHTLTVRPDENPLLVAGHG*VEKNLF
Trigger: AAACAGATTCTTCTCCACCCAACCATGTCCCGCCAC...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTATCCACCCAGACAGCTaGATCTCGCTTCACCATGTG +
Preference number: 4 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCIHPDS*ISLHHV
Trigger: CACATGGTGAAGCGAGATCCAGCTGTCTGGGTGGAT...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTAGAAATAAGGGGTGCTaGGGACAGAGGAGCAACGTG +
Preference number: 4 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCRNKGC*GQRSNV
Trigger: CACGTTGCTCCTCTGTCCCCAGCACCCCTTATTTCT...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAGGCGCTGTCGGCTTTTaGCCGCACAAAGGCATCTAT +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAGAVGF*PHKGIY
Trigger: ATAGATGCCTTTGTGCGGGCAAAAGCCGACAGCGCC...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGACTAAGAACCATCTCTaGTCAGCCTATGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: SLECTHTLTVRPDENPLLTKNHL*SAYGLR
Trigger: TCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAGT...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCATCTCAGGCTGAATGCTaGCCTTCCCCAAATGGCCCA +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWASQAEC*PSPNGP
Trigger: TGGGCCATTTGGGGAAGGCCAGCATTCAGCCTGAGA...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCATCTCTGCTCAGCCTATaGACTCCGACATCCACCCAG +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWASLLSL*TPTSTQ
Trigger: CTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGA...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAACAGGGCAGGTACTGTaGCAGGGCAGCTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWATGQVL*QGSSEI
Trigger: AATTTCAGAGCTGCCCTGGCACAGTACCTGCCCTGT...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAGTTTGCCTTCATGGATaGTCATGTCCATCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAVCLHG*SCPSSR
Trigger: TCGGCTGGATGGACATGACCATCCATGAAGGCAAAC...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTGTCAATCACTTGGGATaGCAGGAAATGGAACTGGAT +
Preference number: 4 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCVNHLG*QEMELD
Trigger: ATCCAGTTCCATTTCCTGCCATCCCAAGTGATTGAC...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGTCAGTACTTACAAACTaGCATTCTTACAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SLECTHTLTVRPDENPLLSVLTN*HSYRLH
Trigger: GTGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGA...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 72 bp TTTGGGCAAGAGTTCCATGATTTTGATACTGTACCTTaGGATCCACCATGGGTTGCAACTGTCTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FGQEFHDFDTVP*DPPWVATVFGF
Trigger: AAAACCAAAGACAGTTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 72 bp TTTGCAGTCTTTTCTTTGGGCAAGAGTTCCATGATTTaGATACTGTACCTTTGGATCCACCATGGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: FAVFSLGKSSMI*ILYLWIHHGLQ
Trigger: TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCATTTATGGCCAAATTGTaGGATTGTGTAGAACATGGC +
Preference number: 4 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAFMAKL*DCVEHG
Trigger: GCCATGTTCTACACAATCGCACAATTTGGCCATAAA...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACATCGTAAGTGTCTTTaGCAATTGCATTTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: GKSSMILILYLWIHHGLQHRKCL*QLHFLE
Trigger: TTCTAGGAAATGCAATTGGCAAAGACACTTACGATG...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCACTCTGTTGGGTCTTGTaGCATCACATCAGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWALCWVL*HHIRPK
Trigger: TTTTGGCCTGATGTGATGCCACAAGACCCAACAGAG...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAGCAGCTCTGAAATTATaGATATTCTTATCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAAALKL*IFLSSW
Trigger: CCAGGAGGATAAGAATATCCATAATTTCAGAGCTGC...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR TCA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAAACACCACTTTGTTATaGAGACCTTACAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAANTTLL*RPYKPL
Trigger: AAGAGGTTTGTAAGGTCTTCATAACAAAGTGGTGTT...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR GCA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGTCTTTGAGCCATTTTTaGAAAGCACGTTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SLECTHTLTVRPDENPLLSLSHF*KARFSV
Trigger: AACAGAGAAACGTGCTTTGCAAAAATGGCTCAAAGA...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAAATGAAAACCCACTTTTaGATAATTAGAACCGTCAAG +
Preference number: 4 (lower is better)
Translates to: GKSSMILILYLWIHHGLQMKTHF*IIRTVK
Trigger: CTTGACGGTTCTAATTATCCAAAAGTGGGTTTTCAT...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTGATCTGATGTTAAGTTaGCTTATCAGTAGAAGCATG +
Preference number: 4 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCDLMLS*LISRSM
Trigger: CATGCTTCTACTGATAAGCCAACTTAACATCAGATC...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
3UTR CAA 72 bp TTGTGTACTTCTCAGCATCGTAAGTGTCTTTGCCAATaGCATTTCCTAGAAAAGTTGTACTGTTTTGATAGG +
Preference number: 4 (lower is better)
Translates to: LCTSQHRKCLCQ*HFLEKLYCFDR
Trigger: CCTATCAAAACAGTACAACTTTTCTAGGAAATGCAATTGGCAAAGACACTTACGATGCTGAGAAGTACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CCA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAATAATTTTTATACTTaGGAGTGCTCCTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWANNFYT*ECSLHR
Trigger: TCTGTGCAAGGAGCACTCCCAAGTATAAAAATTATT...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 90 bp TGCCCCGGGACACCCGCAGCGGGCCATCGGCGCCCCGGTACCGGCTaGCGCCCAGCTCGTGGCCCTGCGCCTTGCGGAAGTAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: CPGTPAAGHRRPGTG*RPARGPAPCGSRAG
Trigger: GCCTGCCCTACTTCCGCAAGGCGCAGGGCCACGAGCTGGGCGCCAGCCGGTACCGGGGCGCCGATGGCCCGCTGCGGGTGTCCCGGGGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 90 bp CGAGGGCGGGTGCAGCTGATGCACCTGGCTCACTGCATGCACGTGTaGGCGGGGGTAGGCGCGCGCCGCGGCGGCCCGTGCTCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: RGRVQLMHLAHCMHV*AGVGARRGGPCSAS
Trigger: GCTGGCGGAGCACGGGCCGCCGCGGCGCGCGCCTACCCCCGCGCACACGTGCATGCAGTGAGCCAGGTGCATCAGCTGCACCCGCCCTCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 90 bp TTTAACCGGCGGCGCCGGCGCCCCGCGCGCTCTCTGCGTCCGGAATaGGGACGCAGCAGTTCCGACCCGGTCGGCCCCGGAGCCGCGAGG +
Preference number: 5 (lower is better)
Translates to: FNRRRRRPARSLRPE*GRSSSDPVGPGAAR
Trigger: CCTCGCGGCTCCGGGGCCGACCGGGTCGGAACTGCTGCGTCCCCATTCCGGACGCAGAGAGCGCGCGGGGCGCCGGCGCCGCCGGTTAAA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 90 bp GCTGCGTGGCCTCCAGGAATGCGCAGTGCAGCGGGTGGTTGGTCTTaGCCCGGGACACCCGCAGCGGGCCATCGGCGCCCCGGTACCGGC +
Preference number: 5 (lower is better)
Translates to: AAWPPGMRSAAGGWS*PGTPAAGHRRPGTG
Trigger: GCCGGTACCGGGGCGCCGATGGCCCGCTGCGGGTGTCCCGGGGCAAGACCAACCACCCGCTGCACTGCGCATTCCTGGAGGCCACGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 90 bp CGGCCTGCTGCGTGGCCTCCAGGAATGCGCAGTGCAGCGGGTGGTTaGTCTTGCCCCGGGACACCCGCAGCGGGCCATCGGCGCCCCGGT +
Preference number: 5 (lower is better)
Translates to: RPAAWPPGMRSAAGG*SCPGTPAAGHRRPG
Trigger: ACCGGGGCGCCGATGGCCCGCTGCGGGTGTCCCGGGGCAAGACCAACCACCCGCTGCACTGCGCATTCCTGGAGGCCACGCAGCAGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 90 bp TGGCCACCAGGGCCGCGGGCATGTGGATCTTCCACGAGAGCCGCTTaGTCCCCGCGAGCACGTCCTTGGGCCCGGCCTCCAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: WPPGPRACGSSTRAA*SPRARPWARPPAAA
Trigger: TGCTGCTGCTGGAGGCCGGGCCCAAGGACGTGCTCGCGGGGAGCAAGCGGCTCTCGTGGAAGATCCACATGCCCGCGGCCCTGGTGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315251.11
ENST00000467802.1
ENST00000481668.5
CDS GCA 90 bp GTCCTCGGTGAGCGGGTAGCCGGCCTGCTGCGTGGCCTCCAGGAATaGGCAGTGCAGCGGGTGGTTGGTCTTGCCCCGGGACACCCGCAG +
Preference number: 5 (lower is better)
Translates to: VLGERVAGLLRGLQE*AVQRVVGLAPGHPQ
Trigger: CTGCGGGTGTCCCGGGGCAAGACCAACCACCCGCTGCACTGCGCATTCCTGGAGGCCACGCAGCAGGCCGGCTACCCGCTCACCGAGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 90 bp CCACCACCACATAGCTGTACTCGTCCCGGCTCTCAGAGCCTGCGCTaGCCAGGGCCCGGGCACCCAGGGATTGCTGCTGCCCCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: PPPHSCTRPGSQSLR*PGPGHPGIAAAPGL
Trigger: GAGCCCTGGGGCAGCAGCAATCCCTGGGTGCCCGGGCCCTGGCCAGCGCAGGCTCTGAGAGCCGGGACGAGTACAGCTATGTGGTGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315251.11
ENST00000467802.1
ENST00000481668.5
CDS TCA 90 bp GTAGTCCTCGGCGTGCCCACGGACGTAGACCATGGCATTGAGGGATaGGGAGCCACCCCAGACGCGGCCGCGTGGCCAGTACAGCACGCG +
Preference number: 5 (lower is better)
Translates to: VVLGVPTDVDHGIEG*GATPDAAAWPVQHA
Trigger: CGCGTGCTGTACTGGCCACGCGGCCGCGTCTGGGGTGGCTCCTCATCCCTCAATGCCATGGTCTACGTCCGTGGGCACGCCGAGGACTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315251.11
ENST00000481668.5
CDS TCA 90 bp AGCGCTCGTAGTCCTCGGCGTGCCCACGGACGTAGACCATGGCATTaGGGGATGAGGAGCCACCCCAGACGCGGCCGCGTGGCCAGTACA +
Preference number: 5 (lower is better)
Translates to: SARSPRRAHGRRPWH*GMRSHPRRGRVAST
Trigger: TGTACTGGCCACGCGGCCGCGTCTGGGGTGGCTCCTCATCCCTCAATGCCATGGTCTACGTCCGTGGGCACGCCGAGGACTACGAGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315251.11
ENST00000481668.5
CDS GCA 90 bp GCTCACAAGCGTCTCGGCCTCGGCCTTGAGGTTGGTGCGGCTCAGTaGTGGGTGCAGGTAGGCACAGGCCGCGCTCCACCGTTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: AHKRLGLGLEVGAAQ*WVQVGTGRAPPFAF
Trigger: GAAGGCAAACGGTGGAGCGCGGCCTGTGCCTACCTGCACCCAGCACTGAGCCGCACCAACCTCAAGGCCGAGGCCGAGACGCTTGTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 90 bp GGATACGGTGCACTCTGTGACCGGGGCTGGCCTACACACTCTTTGTaGTTGTCCGGGGCGACTCGGCCGAGAGCCCGACAGTCGGGACCG +
Preference number: 5 (lower is better)
Translates to: GYGALCDRGWPTHSL*LSGATRPRARQSGP
Trigger: CGGTCCCGACTGTCGGGCTCTCGGCCGAGTCGCCCCGGACAATCACAAAGAGTGTGTAGGCCAGCCCCGGTCACAGAGTGCACCGTATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 90 bp CCATCCAGCCGAAGCCCTCCTGCTGGAAGCCATTCATGTCCTCGGTaGGCGGGTAGCCGGCCTGCTGCGTGGCCTCCAGGAATGCGCAGT +
Preference number: 5 (lower is better)
Translates to: PSSRSPPAGSHSCPR*AGSRPAAWPPGMRS
Trigger: ACTGCGCATTCCTGGAGGCCACGCAGCAGGCCGGCTACCCGCTCACCGAGGACATGAATGGCTTCCAGCAGGAGGGCTTCGGCTGGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 90 bp TTGTACCTGTCGTCGCACAGGTTGGCCACCAGGGCCGCGGGCATGTaGATCTTCCACGAGAGCCGCTTGCTCCCCGCGAGCACGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LYLSSHRLATRAAGM*IFHESRLLPASTSL
Trigger: CAAGGACGTGCTCGCGGGGAGCAAGCGGCTCTCGTGGAAGATCCACATGCCCGCGGCCCTGGTGGCCAACCTGTGCGACGACAGGTACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315251.11
ENST00000467802.1
ENST00000481668.5
CDS CCA 90 bp CACAAGCGTCTCGGCCTCGGCCTTGAGGTTGGTGCGGCTCAGTGCTaGGTGCAGGTAGGCACAGGCCGCGCTCCACCGTTTGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: HKRLGLGLEVGAAQC*VQVGTGRAPPFAFM
Trigger: CATGAAGGCAAACGGTGGAGCGCGGCCTGTGCCTACCTGCACCCAGCACTGAGCCGCACCAACCTCAAGGCCGAGGCCGAGACGCTTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp AGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGGGTCTGGCAGGTTCCACGAGAGCCGCTaGCTCCCCGCGAGCACGTCC +
Preference number: 5 (lower is better)
Translates to: SSRRRMPLPSRTLRGSGRFHESR*LPASTS
Trigger: GGACGTGCTCGCGGGGAGCAAGCGGCTCTCGTGGAA...CCTGCCAGACCCACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 90 bp TGCCCTCAAATAGCACCCTGCTCACAAGCGTCTCGGCCTCGGCCTTaGGGTTGGTGCGGCTCAGTGCTGGGTGCAGGTAGGCACAGGCCG +
Preference number: 5 (lower is better)
Translates to: CPQIAPCSQASRPRP*GWCGSVLGAGRHRP
Trigger: CGGCCTGTGCCTACCTGCACCCAGCACTGAGCCGCACCAACCTCAAGGCCGAGGCCGAGACGCTTGTGAGCAGGGTGCTATTTGAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 90 bp GATCCACCACGGCAGTGGGATCGGAGGGCTGGCCCATCTTACAGGTaGACGAGGGGTGGTAGGCGCTGTCGGCTTTTGCCCGCACAAAGG +
Preference number: 5 (lower is better)
Translates to: DPPRQWDRRAGPSYR*TRGGRRCRLLPAQR
Trigger: CCTTTGTGCGGGCAAAAGCCGACAGCGCCTACCACCCCTCGTGCACCTGTAAGATGGGCCAGCCCTCCGATCCCACTGCCGTGGTGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGCCCGCGAGCACGTCCTaGGGCCCGGCCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWPASTS*GPASSS
Trigger: GCTGCTGGAGGCCGGGCCCAAGGACGTGCTCGCGGG...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 90 bp GAGGCATCGACGACCCTGAGGTTTTCCACCCCGAGGACCCTTGTCTaGGGATCCACCACGGCAGTGGGATCGGAGGGCTGGCCCATCTTA +
Preference number: 5 (lower is better)
Translates to: EASTTLRFSTPRTLV*GSTTAVGSEGWPIL
Trigger: TAAGATGGGCCAGCCCTCCGATCCCACTGCCGTGGTGGATCCGCAGACAAGGGTCCTCGGGGTGGAAAACCTCAGGGTCGTCGATGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 90 bp GCACCTCTGTGTGGTAGCACCAGTTGTACCTGTCGTCGCACAGGTTaGCCACCAGGGCCGCGGGCATGTGGATCTTCCACGAGAGCCGCT +
Preference number: 5 (lower is better)
Translates to: APLCGSTSCTCRRTG*PPGPRACGSSTRAA
Trigger: AGCGGCTCTCGTGGAAGATCCACATGCCCGCGGCCCTGGTGGCCAACCTGTGCGACGACAGGTACAACTGGTGCTACCACACAGAGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315251.11
ENST00000467802.1
ENST00000481668.5
CDS CCA 90 bp GAGCAAGGGCTGTGCTGGCCCTCTTGGCTTATCAGGGGGCTTCCCTaGTCATCCTCCAGCAGCAACTGTCTTAGCGCTGGGTGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: EQGLCWPSWLIRGLP*SSSSSNCLSAGWPA
Trigger: CGCTGGCCACCCAGCGCTAAGACAGTTGCTGCTGGAGGATGACCAGGGAAGCCCCCTGATAAGCCAAGAGGGCCAGCACAGCCCTTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCAGCGGGTGGTTGGTCTaGCCCCGGGACACCCGCAGC +
Preference number: 5 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLSGWLV*PRDTRS
Trigger: GCTGCGGGTGTCCCGGGGCAAGACCAACCACCCGCT...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCCTGTCGTCGCACAGGTaGGCCACCAGGGCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSLSSHR*ATRAAG
Trigger: GCCCGCGGCCCTGGTGGCCAACCTGTGCGACGACAG...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTCAGTGCAGCGGGTGGTaGGTCTTGCCCCGGGACACC +
Preference number: 5 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRQCSGW*VLPRDT
Trigger: GGTGTCCCGGGGCAAGACCAACCACCCGCTGCACTG...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACAGCCTCGGCCTTGAGGTaGGTGCGGCTCAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTASALR*VRLSAG
Trigger: CCCAGCACTGAGCCGCACCAACCTCAAGGCCGAGGC...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCGTGGGGGCGTTCAGGTaGCCGCTGACCATGCTAGGC +
Preference number: 5 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGVGAFR*PLTMLG
Trigger: GCCTAGCATGGTCAGCGGCAACCTGAACGCCCCCAC...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAAGCTGTGCTGGCCCTCTaGGCTTATCAGGGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: PFSPMLASSGDSLSSWGEAVLAL*AYQGAS
Trigger: GGAAGCCCCCTGATAAGCCAAGAGGGCCAGCACAGC...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCCCACCCCGAGGACCCTaGTCTGCGGATCCACCACGG +
Preference number: 5 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSPPRGP*SADPPR
Trigger: CCGTGGTGGATCCGCAGACAAGGGTCCTCGGGGTGG...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 90 bp TCATCCTCCAGCAGCAACTGTCTTAGCGCTGGGTGGCCAGCGTCCTaGGCTTGTAGACAGGGACATCTTTGTCCCAGAGTGCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SSSSSNCLSAGWPAS*ACRQGHLCPRVQAA
Trigger: GGCAGCCTGCACTCTGGGACAAAGATGTCCCTGTCTACAAGCCCAGGACGCTGGCCACCCAGCGCTAAGACAGTTGCTGCTGGAGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 90 bp GGGCTTCCCTGGTCATCCTCCAGCAGCAACTGTCTTAGCGCTGGGTaGCCAGCGTCCTGGGCTTGTAGACAGGGACATCTTTGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: GLPWSSSSSNCLSAG*PASWACRQGHLCPR
Trigger: TCTGGGACAAAGATGTCCCTGTCTACAAGCCCAGGACGCTGGCCACCCAGCGCTAAGACAGTTGCTGCTGGAGGATGACCAGGGAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCGATCTCCAGGTGGTCTaGCAGGTTCTGGCCAACCCC +
Preference number: 5 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGDLQVV*QVLANP
Trigger: GGGGTTGGCCAGAACCTGCAAGACCACCTGGAGATC...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 90 bp TGGTCAATCACTTGGGATGGCAGGAAATGGAACTGGATGTCCGGGTaGGGGACCCCAGGCTGGCTGCGGATGAACCCACCTGTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: WSITWDGRKWNWMSG*GTPGWLRMNPPVSR
Trigger: TCTGGAAACAGGTGGGTTCATCCGCAGCCAGCCTGGGGTCCCCCACCCGGACATCCAGTTCCATTTCCTGCCATCCCAAGTGATTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACAGCCGCGCTCCACCGTTaGCCTTCATGGATGGTCATG +
Preference number: 5 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTAALHR*PSWMVM
Trigger: CATGACCATCCATGAAGGCAAACGGTGGAGCGCGGC...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCGTCTCGGCCTCGGCCTaGAGGTTGGTGCGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSVSASA*RLVRLS
Trigger: ACTGAGCCGCACCAACCTCAAGGCCGAGGCCGAGAC...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAAGGGTGGTCTTGGGGATaGGCACTTCTCAGTTTGAGC +
Preference number: 5 (lower is better)
Translates to: PFSPMLASSGDSLSSWGEGWSWG*ALLSLS
Trigger: GCTCAAACTGAGAAGTGCCAATCCCCAAGACCACCC...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 90 bp CACTTCTCCCTCACATCCAGAAGTGACAGGATACGGTGCACTCTGTaGCCGGGGCTGGCCTACACACTCTTTGTGATTGTCCGGGGCGAC +
Preference number: 5 (lower is better)
Translates to: HFSLTSRSDRIRCTL*PGLAYTLFVIVRGD
Trigger: GTCGCCCCGGACAATCACAAAGAGTGTGTAGGCCAGCCCCGGTCACAGAGTGCACCGTATCCTGTCACTTCTGGATGTGAGGGAGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 90 bp GAGCCACTCCAGACCAATGCAGACCTTCCGCAGGGGCTTCTGTGCTaGATGGAGGGTGATAGGGCGGGTGCATGCCTGCTGAATGTAGAT +
Preference number: 5 (lower is better)
Translates to: EPLQTNADLPQGLLC*MEGDRAGACLLNVD
Trigger: ATCTACATTCAGCAGGCATGCACCCGCCCTATCACCCTCCATTCAGCACAGAAGCCCCTGCGGAAGGTCTGCATTGGTCTGGAGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 90 bp GTCCCAGAGTGCAGGCTGCCCCTTGATAATGTCAGCTGCCTTCTCTaGGATCATGATTGTGGGGGCGTTCAGGTTGCCGCTGACCATGCT +
Preference number: 5 (lower is better)
Translates to: VPECRLPLDNVSCLL*DHDCGGVQVAADHA
Trigger: AGCATGGTCAGCGGCAACCTGAACGCCCCCACAATCATGATCGCAGAGAAGGCAGCTGACATTATCAAGGGGCAGCCTGCACTCTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCTGGCTCTGGCCATTCTaGACATACTCCACGCCCACT +
Preference number: 5 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGWLWPF*TYSTPT
Trigger: AGTGGGCGTGGAGTATGTCAAGAATGGCCAGAGCCA...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGGGGATGCCCAGTTTCTaGAGGTCATCAGCATTCCCG +
Preference number: 5 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLGMPSF*RSSAFP
Trigger: CGGGAATGCTGATGACCTCAAGAAACTGGGCATCCC...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACAGCACAGAGCTGTCATTaGCCAGTGAGAGCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTAQSCH*PVRASD
Trigger: GTCGGAGGCTCTCACTGGCAAATGACAGCTCTGTGC...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCCTCCAAGTTACGGGGCTGGCACCTGAACTCCTGTTTCTGCACTCTTGCAGGCTGGCTGCTCTGCCCCTaGGGTATCCATAGTTACGGT +
Preference number: 5 (lower is better)
Translates to: PSKLRGWHLNSCFCTLAGWLLCP*GIHSYG
Trigger: ACCGTAACTATGGATACCCAAGGGGCAGAGCAGCCA...GCCTGCAAGAGTGCAGAAACAGGAGTTCAGGTGCCAGCCCCGTAACTTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 90 bp CACTTCTCCCTCACATCCAGAAGTGACAGGATACGGTGCACTCTGTaGCCGGGGCTGGCCTACACACTCTTTGTGATTGTCTCCGCACCC +
Preference number: 5 (lower is better)
Translates to: HFSLTSRSDRIRCTL*PGLAYTLFVIVSAP
Trigger: GGGTGCGGAGACAATCACAAAGAGTGTGTAGGCCAGCCCCGGTCACAGAGTGCACCGTATCCTGTCACTTCTGGATGTGAGGGAGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481668.5
CDS GCA 90 bp GGCCAGCGTCCTGGGCTTGTAGACAGGGACATCTTTGTCCCAGAGTaGAGGCTGCCCCTTGATAATGTCAGCTGCCTTCTCTGCGATCAT +
Preference number: 5 (lower is better)
Translates to: GQRPGLVDRDIFVPE*RLPLDNVSCLLCDH
Trigger: ATGATCGCAGAGAAGGCAGCTGACATTATCAAGGGGCAGCCTGCACTCTGGGACAAAGATGTCCCTGTCTACAAGCCCAGGACGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp AGGGTCAGCACAGTCATGGTTGGTCCAGGACTATCCCCTGCCCCTGAATCCACATCTCAGAAAACTAACTaGTGGCTGTCGGACGCCCCC +
Preference number: 5 (lower is better)
Translates to: RVSTVMVGPGLSPAPESTSQKTN*WLSDAP
Trigger: GGGGGCGTCCGACAGCCACAAGTTAGTTTTCTGAGA...TGTGGATTCAGGGGCAGGGGATAGTCCTGGACCAACCATGACTGTGCTGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCCCTGTTTCTGCACTCTaGCAGGCAGCCCCGAGACCC +
Preference number: 5 (lower is better)
Translates to: SGPSIAAGFHATMLFFPAPVSAL*QAAPRP
Trigger: GGGTCTCGGGGCTGCCTGCAAGAGTGCAGAAACAGG...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 90 bp GGCGCTGTCGGCTTTTGCCCGCACAAAGGCATCTATCTCTTTATCTaGCTGAATGTGGCTTCCTGGCTGGAGCTCTTTCCCTCGGAACGG +
Preference number: 5 (lower is better)
Translates to: GAVGFCPHKGIYLFI*LNVASWLELFPSER
Trigger: CCGTTCCGAGGGAAAGAGCTCCAGCCAGGAAGCCACATTCAGTCAGATAAAGAGATAGATGCCTTTGTGCGGGCAAAAGCCGACAGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 90 bp GACATCTTTGTCCCAGAGTGCAGGCTGCCCCTTGATAATGTCAGCTaGCTTCTCTGCGATCATGATTGTGGGGGCGTTCAGGTTGCCGCT +
Preference number: 5 (lower is better)
Translates to: DIFVPECRLPLDNVS*LLCDHDCGGVQVAA
Trigger: AGCGGCAACCTGAACGCCCCCACAATCATGATCGCAGAGAAGGCAGCTGACATTATCAAGGGGCAGCCTGCACTCTGGGACAAAGATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAAACGTGGGGTTTGCTCTaGGTTTCTGCATTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: PFSPMLASSGDSLSSWGETWGLL*VSAFLG
Trigger: ACCAAGAAATGCAGAAACCAAGAGCAAACCCCACGT...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCTACGAAGTTTCAGAATaGGGCGAAGGCCAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSYEVSE*GEGQAW
Trigger: CCACGCCTGGCCTTCGCCCAATTCTGAAACTTCGTA...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 90 bp CTGTCGGCTTTTGCCCGCACAAAGGCATCTATCTCTTTATCTGACTaGATGTGGCTTCCTGGCTGGAGCTCTTTCCCTCGGAACGGAGCC +
Preference number: 5 (lower is better)
Translates to: LSAFARTKASISLSD*MWLPGWSSFPRNGA
Trigger: GGCTCCGTTCCGAGGGAAAGAGCTCCAGCCAGGAAGCCACATTCAGTCAGATAAAGAGATAGATGCCTTTGTGCGGGCAAAAGCCGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 90 bp GGATACGGTGCACTCTGTGACCGGGGCTGGCCTACACACTCTTTGTaGTTGTGGAATGAACGCATGTTAGTGAATGGCTGCCTGCTCGCT +
Preference number: 5 (lower is better)
Translates to: GYGALCDRGWPTHSL*LWNERMLVNGCLLA
Trigger: AGCGAGCAGGCAGCCATTCACTAACATGCGTTCATTCCACAATCACAAAGAGTGTGTAGGCCAGCCCCGGTCACAGAGTGCACCGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467802.1
CDS GCA 90 bp TCCTGGCTGGAGCTCTTTCCCTCGGAACGGAGCCAGGGCTTCCTGTaGAAAAATTTCTCTGGTGAGCTTCACACACAGACGGAAATCCTC +
Preference number: 5 (lower is better)
Translates to: SWLELFPSERSQGFL*KNFSGELHTQTEIL
Trigger: GAGGATTTCCGTCTGTGTGTGAAGCTCACCAGAGAAATTTTTGCACAGGAAGCCCTGGCTCCGTTCCGAGGGAAAGAGCTCCAGCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCTTGGCACTTCTCAGTTaGAGCCAGCCCACACTCGTG +
Preference number: 5 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSLALLS*SQPTLV
Trigger: CACGAGTGTGGGCTGGCTCAAACTGAGAAGTGCCAA...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCGATCACAGGGTGGTCTaGGGGATTGGCACTTCTCAG +
Preference number: 5 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSDHRVV*GIGTSQ
Trigger: CTGAGAAGTGCCAATCCCCAAGACCACCCTGTGATC...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCGACTGTCAGGTTACCTaGGCAGGGATTCCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: FGCLQLLLQELTISSQAADCQVT*AGIPCN
Trigger: ATTGCAGGGAATCCCTGCCAAGGTAACCTGACAGTC...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCTCTGGTACGTGGGGTTaGCTCTTGGTTTCTGCATTT +
Preference number: 5 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLSGTWG*LLVSAF
Trigger: AAATGCAGAAACCAAGAGCAAACCCCACGTACCAGA...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp AGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTGGGTCTGGCAGGCTGTTTATGGCCAAATaGTGCGATTGTGTAGAACAT +
Preference number: 5 (lower is better)
Translates to: SSRRRMPLPSRTLRGSGRLFMAK*CDCVEH
Trigger: ATGTTCTACACAATCGCACAATTTGGCCATAAACAG...CCTGCCAGACCCACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCTCTCTCTGTTGGGTCTaGTGGCATCACATCAGGCCA +
Preference number: 5 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSSLCWV*WHHIRP
Trigger: TGGCCTGATGTGATGCCACAAGACCCAACAGAGAGA...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CTGTGGGGCAGGTGGGGACCCTCCGTAGGAGAAATAAGTCTCTTGGCCGGTTTATTCACTGCCCAGTACTaGTCTCATTTCCCAAGACTT +
Preference number: 5 (lower is better)
Translates to: LWGRWGPSVGEISLLAGLFTAQY*SHFPRL
Trigger: AAGTCTTGGGAAATGAGACAAGTACTGGGCAGTGAA...TAAACCGGCCAAGAGACTTATTTCTCCTACGGAGGGTCCCCACCTGCCCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCGGCCAAATTGTGCGATaGTGTAGAACATGGCTAAGT +
Preference number: 5 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLGQIVR*CRTWLS
Trigger: ACTTAGCCATGTTCTACACAATCGCACAATTTGGCC...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp GCTAAAGCTTGCAGCTCAAGAAGGAGGATGCCCCTTCCTTCGCGAACCCTCCGTAACATGGCTAAGTATTaGAGAGTGAAAGAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: AKACSSRRRMPLPSRTLRNMAKY*RVKEGP
Trigger: AGGCCCTTCTTTCACTCTCAAATACTTAGCCATGTT...ACGGAGGGTTCGCGAAGGAAGGGGCATCCTCCTTCTTGAGCTGCAAGCTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCTTTCTCCCCCATGCTGGCTTCCTCAGGTGACAGCCTCTCCTCCTGGGGTGAAGACTCCAGGGATGTTTaGTTGAAAATGTTATTTCTC +
Preference number: 5 (lower is better)
Translates to: PFSPMLASSGDSLSSWGEDSRDV*LKMLFL
Trigger: GAGAAATAACATTTTCAACAAAACATCCCTGGAGTC...TTCACCCCAGGAGGAGAGGCTGTCACCTGAGGAAGCCAGCATGGGGGAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TTTGGGTGCCTACAACTCCTGCTTCAGGAACTCACCATCTCCAGTCAGGCTGCCTTTGATACTGTACCTTaGGATCCACCATGGGTTGCA +
Preference number: 5 (lower is better)
Translates to: FGCLQLLLQELTISSQAAFDTVP*DPPWVA
Trigger: TGCAACCCATGGTGGATCCAAAGGTACAGTATCAAA...GGCAGCCTGACTGGAGATGGTGAGTTCCTGAAGCAGGAGTTGTAGGCACCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp GCAACTTTCCCCTCTCAACAGGGACACTGGGGACTTATGTGCCAGCCCAGGCTGATACCAGATGACTATTaGCAGTCTTTTCTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: ATFPSQQGHWGLMCQPRLIPDDY*QSFLWA
Trigger: TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTAT...CAGCCTGGGCTGGCACATAAGTCCCCAGTGTCCCTGTTGAGAGGGGAAAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCTGGATCCACCATGGGTaGCAACTGTCTTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: SGPSIAAGFHATMLFFPAWIHHG*QLSLVL
Trigger: CAAAACCAAAGACAGTTGCAACCCATGGTGGATCCA...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 90 bp TCCCTCGGAACGGAGCCAGGGCTTCCTGTGCAAAAATTTCTCTGGTaGGCTTCACACACAGACGGAAATCCTCAATATCAGTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SLGTEPGLPVQKFLW*ASHTDGNPQYQFLL
Trigger: CAACAGAAACTGATATTGAGGATTTCCGTCTGTGTGTGAAGCTCACCAGAGAAATTTTTGCACAGGAAGCCCTGGCTCCGTTCCGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TATCCTCCTGGTTCCTTCGGTGCCAATGGTAACCTAATACCAGCCGCAGGGAGCGGAGAAATAAGTCTCTaGGCCGGTTTAGAATTTTCT +
Preference number: 5 (lower is better)
Translates to: YPPGSFGANGNLIPAAGSGEISL*AGLEFS
Trigger: AGAAAATTCTAAACCGGCCAAGAGACTTATTTCTCC...GCTCCCTGCGGCTGGTATTAGGTTACCATTGGCACCGAAGGAACCAGGAGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CTCTGTGCACCCCACTTTGTAGCAAGTGCCTTTCTCCCCCATGCTGGCTTCCTCAAGTGTCTTTGCCAATaGCATTTCCTAGAAAAGTTG +
Preference number: 5 (lower is better)
Translates to: LCAPHFVASAFLPHAGFLKCLCQ*HFLEKL
Trigger: CAACTTTTCTAGGAAATGCAATTGGCAAAGACACTT...GAGGAAGCCAGCATGGGGGAGAAAGGCACTTGCTACAAAGTGGGGTGCACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CTAAGAACCATCTCTGCTCAGCCTATGGACTCCGACATCCACCCAGACAGCTGGTTTTGTTTGTTTGACTaGAACCACCCTCTGGTAAGT +
Preference number: 5 (lower is better)
Translates to: LRTISAQPMDSDIHPDSWFCLFD*NHPLVS
Trigger: ACTTACCAGAGGGTGGTTCAAGTCAAACAAACAAAA...CCAGCTGTCTGGGTGGATGTCGGAGTCCATAGGCTGAGCAGAGATGGTTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTAGGCGCTGTCGGCTTTaGCCCGCACAAAGGCATCTA +
Preference number: 5 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCRRCRL*PAQRHL
Trigger: TAGATGCCTTTGTGCGGGCAAAAGCCGACAGCGCCT...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGAGTGCAGGCTGCCCCTaGATAATGTCAGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SLECTHTLTVRPDENPLLSAGCP*IMSAAF
Trigger: GAAGGCAGCTGACATTATCAAGGGGCAGCCTGCACT...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGCCCGTGGTCAATCACTaGGGATGGCAGGAAATGGAA +
Preference number: 5 (lower is better)
Translates to: SLECTHTLTVRPDENPLLPVVNH*GWQEME
Trigger: TTCCATTTCCTGCCATCCCAAGTGATTGACCACGGG...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTAGGTACTGCAAGCTTTaGGCCAAGGGGCCCAATTCC +
Preference number: 5 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCRYCKL*AKGPNS
Trigger: GGAATTGGGCCCCTTGGCCAAAAGCTTGCAGTACCT...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp CCCTGGTTTAATAAGAACCAGAGCCACAACCCTCTCAGAGTGACCCAGTGGAGCCATTTCCTAGAAAAGTaGTACTGTTTTGATAGGCAG +
Preference number: 5 (lower is better)
Translates to: PWFNKNQSHNPLRVTQWSHFLEK*YCFDRQ
Trigger: CTGCCTATCAAAACAGTACAACTTTTCTAGGAAATG...GCTCCACTGGGTCACTCTGAGAGGGTTGTGGCTCTGGTTCTTATTAAACCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TCATTAGAATGCACTCACACTCTGACTGTACGTCCTGATGAAAACCCACTTTTGACTTGGGAGTGCTCCTaGCACAGAGCTGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: SLECTHTLTVRPDENPLLTWECS*HRAVIC
Trigger: GCAAATGACAGCTCTGTGCAAGGAGCACTCCCAAGT...CAAAAGTGGGTTTTCATCAGGACGTACAGTCAGAGTGTGAGTGCATTCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TCTGGGCCTAGTATAGCTGCAGGTTTCCACGCAACAATGCTTTTCTTCCCAGCCGTACAAATCGTATTGTaGCCTTTTACAAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: SGPSIAAGFHATMLFFPAVQIVL*PFTKLL
Trigger: CAGCAGTTTTGTAAAAGGCAACAATACGATTTGTAC...GGCTGGGAAGAAAAGCATTGTTGCGTGGAAACCTGCAGCTATACTAGGCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp GCGATGATCTTTTCCAAAGTCAGTACTTACAAACTGGCATTCTTACAGGCTGCAGGACAGCGCATTCTGTaGTGCTCTTTGAGCCATTTT +
Preference number: 5 (lower is better)
Translates to: AMIFSKVSTYKLAFLQAAGQRIL*CSLSHF
Trigger: AAAATGGCTCAAAGAGCACAACAGAATGCGCTGTCC...TGCAGCCTGTAAGAATGCCAGTTTGTAAGTACTGACTTTGGAAAAGATCATCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTCACCCAGGGTGTTTTTaGCATCGCTGGTGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCHPGCF*HRWCRN
Trigger: ATTTCTGCACCAGCGATGCAAAAAACACCCTGGGTG...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAACAATATCAGTTTCTGTaGACAAGTAGTTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: GKSSMILILYLWIHHGLQQYQFL*TSSWAG
Trigger: TCCAGCCCAACTACTTGTCAACAGAAACTGATATTG...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCACACATCAGGCCAAAATaGCCAGACCAGGACCCTAAG +
Preference number: 5 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAHIRPK*PDQDPK
Trigger: CTTAGGGTCCTGGTCTGGCAATTTTGGCCTGATGTG...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCACTGTGTCTCTCTCTGTaGGGTCTTGTGGCATCACAT +
Preference number: 5 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWALCLSL*GLVASH
Trigger: ATGTGATGCCACAAGACCCAACAGAGAGAGACACAG...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp GGCAAGAGTTCCATGATTTTGATACTGTACCTTTGGATCCACCATGGGTTGCAATTTGCAGTCTTTTCTTaGGGCAAGAGTTCCATGATT +
Preference number: 5 (lower is better)
Translates to: GKSSMILILYLWIHHGLQFAVFS*GKSSMI
Trigger: AATCATGGAACTCTTGCCCAAAGAAAAGACTGCAAA...TTGCAACCCATGGTGGATCCAAAGGTACAGTATCAAAATCATGGAACTCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp ATCATCTTTCCACAAGATATACCAGATGACTATTTGCAGTCTTTTCTTTGGGCAAAAAGTTGTACTGTTTaGATAGGCAGCTGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: IIFPQDIPDDYLQSFLWAKSCTV*IGSWLV
Trigger: AACCAGCCAGCTGCCTATCAAAACAGTACAACTTTT...TGCCCAAAGAAAAGACTGCAAATAGTCATCTGGTATATCTTGTGGAAAGATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS-3UTR CAA 90 bp TATGAGAAAAACTGGAGCAGTTTCACCTTGTGTACTTCTCAGCATCGTAAGTGTAAGAGTTCCATGATTTaGATACTGTACCTTTGGATC +
Preference number: 5 (lower is better)
Translates to: YEKNWSSFTLCTSQHRKCKSSMI*ILYLWI
Trigger: GATCCAAAGGTACAGTATCAAAATCATGGAACTCTT...ACACTTACGATGCTGAGAAGTACACAAGGTGAAACTGCTCCAGTTTTTCTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 72 bp CGGCGCCGGCGCCCCGCGCGCTCTCTGCGTCCGGAATaGGGACGCAGCAGTTCCGACCCGGTCGGCCCCGGA +
Preference number: 6 (lower is better)
Translates to: RRRRPARSLRPE*GRSSSDPVGPG
Trigger: TCCGGGGCCGACCGGGTCGGAACTGCTGCGTCCCCATTCCGGACGCAGAGAGCGCGCGGGGCGCCGGCGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 72 bp CCTGCGCTGGCCAGGGCCCGGGCACCCAGGGATTGCTaGTGCCCCAGGGCTCCCCGTGCCAGGGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: PALARARAPRDC*CPRAPRARAPG
Trigger: GCCTGGAGCCCTGGCACGGGGAGCCCTGGGGCAGCAGCAATCCCTGGGTGCCCGGGCCCTGGCCAGCGCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315251.11
ENST00000467802.1
ENST00000481668.5
CDS CAA 90 bp CCGGCCTGCTGCGTGGCCTCCAGGAATGCGCAGTGCAGCGGGTGGTaGGTCTTGCCCCGGGACACCCGCAGCGGGCCATCGGCGCCCCGG +
Preference number: 6 (lower is better)
Translates to: PACCVASRNAQCSGW*VLPRDTRSGPSAPR
Trigger: CCGGGGCGCCGATGGCCCGCTGCGGGTGTCCCGGGGCAAGACCAACCACCCGCTGCACTGCGCATTCCTGGAGGCCACGCAGCAGGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 72 bp GCCCGAGGGCGGGTGCAGCTGATGCACCTGGCTCACTaGATGCACGTGTGCGCGGGGGTAGGCGCGCGCCGC +
Preference number: 6 (lower is better)
Translates to: ARGRVQLMHLAH*MHVCAGVGARR
Trigger: GCGGCGCGCGCCTACCCCCGCGCACACGTGCATGCAGTGAGCCAGGTGCATCAGCTGCACCCGCCCTCGGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 72 bp ACTTTAACCGGCGGCGCCGGCGCCCCGCGCGCTCTCTaGGTCCGGAATGGGGACGCAGCAGTTCCGACCCGG +
Preference number: 6 (lower is better)
Translates to: TLTGGAGAPRAL*VRNGDAAVPTR
Trigger: CCGGGTCGGAACTGCTGCGTCCCCATTCCGGACGCAGAGAGCGCGCGGGGCGCCGGCGCCGCCGGTTAAAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 72 bp CCTCCAGGAATGCGCAGTGCAGCGGGTGGTTGGTCTTaGCCCGGGACACCCGCAGCGGGCCATCGGCGCCCC +
Preference number: 6 (lower is better)
Translates to: PPGMRSAAGGWS*PGTPAAGHRRP
Trigger: GGGGCGCCGATGGCCCGCTGCGGGTGTCCCGGGGCAAGACCAACCACCCGCTGCACTGCGCATTCCTGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CAA 72 bp GCCTCCAGGAATGCGCAGTGCAGCGGGTGGTTGGTCTaGCCCCGGGACACCCGCAGCGGGCCATCGGCGCCC +
Preference number: 6 (lower is better)
Translates to: ASRNAQCSGWLV*PRDTRSGPSAP
Trigger: GGGCGCCGATGGCCCGCTGCGGGTGTCCCGGGGCAAGACCAACCACCCGCTGCACTGCGCATTCCTGGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CAA 90 bp TGCTGCGTGGCCTCCAGGAATGCGCAGTGCAGCGGGTGGTTGGTCTaGCCCCGGGACACCCGCAGCGGGCCATCGGCGCCCCGGTACCGG +
Preference number: 6 (lower is better)
Translates to: CCVASRNAQCSGWLV*PRDTRSGPSAPRYR
Trigger: CCGGTACCGGGGCGCCGATGGCCCGCTGCGGGTGTCCCGGGGCAAGACCAACCACCCGCTGCACTGCGCATTCCTGGAGGCCACGCAGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 72 bp GGGCCGCGGGCATGTGGATCTTCCACGAGAGCCGCTTaGTCCCCGCGAGCACGTCCTTGGGCCCGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: GPRACGSSTRAA*SPRARPWARPP
Trigger: TGGAGGCCGGGCCCAAGGACGTGCTCGCGGGGAGCAAGCGGCTCTCGTGGAAGATCCACATGCCCGCGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315251.11
ENST00000467802.1
ENST00000481668.5
CDS CCA 72 bp GCGTGGCCTCCAGGAATGCGCAGTGCAGCGGGTGGTTaGTCTTGCCCCGGGACACCCGCAGCGGGCCATCGG +
Preference number: 6 (lower is better)
Translates to: AWPPGMRSAAGG*SCPGTPAAGHR
Trigger: CCGATGGCCCGCTGCGGGTGTCCCGGGGCAAGACCAACCACCCGCTGCACTGCGCATTCCTGGAGGCCACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CAA 90 bp TTGGCCACCAGGGCCGCGGGCATGTGGATCTTCCACGAGAGCCGCTaGCTCCCCGCGAGCACGTCCTTGGGCCCGGCCTCCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LATRAAGMWIFHESR*LPASTSLGPASSSS
Trigger: GCTGCTGCTGGAGGCCGGGCCCAAGGACGTGCTCGCGGGGAGCAAGCGGCTCTCGTGGAAGATCCACATGCCCGCGGCCCTGGTGGCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315251.11
ENST00000467802.1
ENST00000481668.5
CDS GCA 72 bp GAGCGGGTAGCCGGCCTGCTGCGTGGCCTCCAGGAATaGGCAGTGCAGCGGGTGGTTGGTCTTGCCCCGGGA +
Preference number: 6 (lower is better)
Translates to: ERVAGLLRGLQE*AVQRVVGLAPG
Trigger: TCCCGGGGCAAGACCAACCACCCGCTGCACTGCGCATTCCTGGAGGCCACGCAGCAGGCCGGCTACCCGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 72 bp TGCTGCGTGGCCTCCAGGAATGCGCAGTGCAGCGGGTaGTTGGTCTTGCCCCGGGACACCCGCAGCGGGCCA +
Preference number: 6 (lower is better)
Translates to: CCVASRNAQCSG*LVLPRDTRSGP
Trigger: TGGCCCGCTGCGGGTGTCCCGGGGCAAGACCAACCACCCGCTGCACTGCGCATTCCTGGAGGCCACGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CAA 72 bp TGCGTGGCCTCCAGGAATGCGCAGTGCAGCGGGTGGTaGGTCTTGCCCCGGGACACCCGCAGCGGGCCATCG +
Preference number: 6 (lower is better)
Translates to: CVASRNAQCSGW*VLPRDTRSGPS
Trigger: CGATGGCCCGCTGCGGGTGTCCCGGGGCAAGACCAACCACCCGCTGCACTGCGCATTCCTGGAGGCCACGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 72 bp CATAGCTGTACTCGTCCCGGCTCTCAGAGCCTGCGCTaGCCAGGGCCCGGGCACCCAGGGATTGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: HSCTRPGSQSLR*PGPGHPGIAAA
Trigger: GGCAGCAGCAATCCCTGGGTGCCCGGGCCCTGGCCAGCGCAGGCTCTGAGAGCCGGGACGAGTACAGCTATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315251.11
ENST00000467802.1
ENST00000481668.5
CDS TCA 72 bp GGCGTGCCCACGGACGTAGACCATGGCATTGAGGGATaGGGAGCCACCCCAGACGCGGCCGCGTGGCCAGTA +
Preference number: 6 (lower is better)
Translates to: GVPTDVDHGIEG*GATPDAAAWPV
Trigger: TACTGGCCACGCGGCCGCGTCTGGGGTGGCTCCTCATCCCTCAATGCCATGGTCTACGTCCGTGGGCACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315251.11
ENST00000481668.5
CDS TCA 72 bp AGTCCTCGGCGTGCCCACGGACGTAGACCATGGCATTaGGGGATGAGGAGCCACCCCAGACGCGGCCGCGTG +
Preference number: 6 (lower is better)
Translates to: SPRRAHGRRPWH*GMRSHPRRGRV
Trigger: CACGCGGCCGCGTCTGGGGTGGCTCCTCATCCCTCAATGCCATGGTCTACGTCCGTGGGCACGCCGAGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315251.11
ENST00000481668.5
CDS CCA 72 bp CTCGGCCTCGGCCTTGAGGTTGGTGCGGCTCAGTGCTaGGTGCAGGTAGGCACAGGCCGCGCTCCACCGTTT +
Preference number: 6 (lower is better)
Translates to: LGLGLEVGAAQC*VQVGTGRAPPF
Trigger: AAACGGTGGAGCGCGGCCTGTGCCTACCTGCACCCAGCACTGAGCCGCACCAACCTCAAGGCCGAGGCCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 72 bp CGGCAGTGGGATCGGAGGGCTGGCCCATCTTACAGGTaGACGAGGGGTGGTAGGCGCTGTCGGCTTTTGCCC +
Preference number: 6 (lower is better)
Translates to: RQWDRRAGPSYR*TRGGRRCRLLP
Trigger: GGGCAAAAGCCGACAGCGCCTACCACCCCTCGTGCACCTGTAAGATGGGCCAGCCCTCCGATCCCACTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 72 bp CCCCGAGGACCCTTGTCTGCGGATCCACCACGGCAGTaGGATCGGAGGGCTGGCCCATCTTACAGGTGCACG +
Preference number: 6 (lower is better)
Translates to: PRGPLSADPPRQ*DRRAGPSYRCT
Trigger: CGTGCACCTGTAAGATGGGCCAGCCCTCCGATCCCACTGCCGTGGTGGATCCGCAGACAAGGGTCCTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 72 bp GCACTCTGTGACCGGGGCTGGCCTACACACTCTTTGTaGTTGTCCGGGGCGACTCGGCCGAGAGCCCGACAG +
Preference number: 6 (lower is better)
Translates to: ALCDRGWPTHSL*LSGATRPRARQ
Trigger: CTGTCGGGCTCTCGGCCGAGTCGCCCCGGACAATCACAAAGAGTGTGTAGGCCAGCCCCGGTCACAGAGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 72 bp ACGACCCTGAGGTTTTCCACCCCGAGGACCCTTGTCTaGGGATCCACCACGGCAGTGGGATCGGAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: TTLRFSTPRTLV*GSTTAVGSEGW
Trigger: CCAGCCCTCCGATCCCACTGCCGTGGTGGATCCGCAGACAAGGGTCCTCGGGGTGGAAAACCTCAGGGTCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CAA 90 bp CTGGTAAGCCTCCTGCTGGGTGGGGACCCGCCCGTGGTCAATCACTaGGGATGGCAGGAAATGGAACTGGATGTCCGGGTGGGGGACCCC +
Preference number: 6 (lower is better)
Translates to: LVSLLLGGDPPVVNH*GWQEMELDVRVGDP
Trigger: GGGGTCCCCCACCCGGACATCCAGTTCCATTTCCTGCCATCCCAAGTGATTGACCACGGGCGGGTCCCCACCCAGCAGGAGGCTTACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 72 bp CTGGGTGGGGACCCGCCCGTGGTCAATCACTTGGGATaGCAGGAAATGGAACTGGATGTCCGGGTGGGGGAC +
Preference number: 6 (lower is better)
Translates to: LGGDPPVVNHLG*QEMELDVRVGD
Trigger: GTCCCCCACCCGGACATCCAGTTCCATTTCCTGCCATCCCAAGTGATTGACCACGGGCGGGTCCCCACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 72 bp TGGGCCCCACATGTACCTGGTAAGCCTCCTGCTGGGTaGGGACCCGCCCGTGGTCAATCACTTGGGATGGCA +
Preference number: 6 (lower is better)
Translates to: WAPHVPGKPPAG*GPARGQSLGMA
Trigger: TGCCATCCCAAGTGATTGACCACGGGCGGGTCCCCACCCAGCAGGAGGCTTACCAGGTACATGTGGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 72 bp TGTGGTAGCACCAGTTGTACCTGTCGTCGCACAGGTTaGCCACCAGGGCCGCGGGCATGTGGATCTTCCACG +
Preference number: 6 (lower is better)
Translates to: CGSTSCTCRRTG*PPGPRACGSST
Trigger: CGTGGAAGATCCACATGCCCGCGGCCCTGGTGGCCAACCTGTGCGACGACAGGTACAACTGGTGCTACCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315251.11
ENST00000467802.1
ENST00000481668.5
CDS CCA 72 bp TCCTGCTGGGTGGGGACCCGCCCGTGGTCAATCACTTaGGATGGCAGGAAATGGAACTGGATGTCCGGGTGG +
Preference number: 6 (lower is better)
Translates to: SCWVGTRPWSIT*DGRKWNWMSGW
Trigger: CCACCCGGACATCCAGTTCCATTTCCTGCCATCCCAAGTGATTGACCACGGGCGGGTCCCCACCCAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CAA 72 bp CTCCTGCTGGGTGGGGACCCGCCCGTGGTCAATCACTaGGGATGGCAGGAAATGGAACTGGATGTCCGGGTG +
Preference number: 6 (lower is better)
Translates to: LLLGGDPPVVNH*GWQEMELDVRV
Trigger: CACCCGGACATCCAGTTCCATTTCCTGCCATCCCAAGTGATTGACCACGGGCGGGTCCCCACCCAGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CAA 72 bp ATCACAGGGTGGTCTTGGGGATTGGCACTTCTCAGTTaGAGCCAGCCCACACTCGTGCCCCGCATGGGCCCC +
Preference number: 6 (lower is better)
Translates to: ITGWSWGLALLS*SQPTLVPRMGP
Trigger: GGGGCCCATGCGGGGCACGAGTGTGGGCTGGCTCAAACTGAGAAGTGCCAATCCCCAAGACCACCCTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 72 bp CAGACCAATGCAGACCTTCCGCAGGGGCTTCTGTGCTaGATGGAGGGTGATAGGGCGGGTGCATGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: QTNADLPQGLLC*MEGDRAGACLL
Trigger: CAGCAGGCATGCACCCGCCCTATCACCCTCCATTCAGCACAGAAGCCCCTGCGGAAGGTCTGCATTGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 72 bp CCAGGCTGGCTGCGGATGAACCCACCTGTTTCCAGATaGGCAGTGGCTCCCTCCCCTGTGAATTTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: PGWLRMNPPVSR*AVAPSPVNFQS
Trigger: GCTCTGGAAATTCACAGGGGAGGGAGCCACTGCCCATCTGGAAACAGGTGGGTTCATCCGCAGCCAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 72 bp CCTTGCTGGCATAAGCCCTGTGGCTCTGGCCATTCTTaGCATACTCCACGCCCACTGCACGGGTGCCCTCAA +
Preference number: 6 (lower is better)
Translates to: PCWHKPCGSGHS*HTPRPLHGCPQ
Trigger: TTGAGGGCACCCGTGCAGTGGGCGTGGAGTATGTCAAGAATGGCCAGAGCCACAGGGCTTATGCCAGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CAA 90 bp ATGTCAGCTGCCTTCTCTGCGATCATGATTGTGGGGGCGTTCAGGTaGCCGCTGACCATGCTAGGCATGATGGAGGCATCGACGACCCTG +
Preference number: 6 (lower is better)
Translates to: MSAAFSAIMIVGAFR*PLTMLGMMEASTTL
Trigger: CAGGGTCGTCGATGCCTCCATCATGCCTAGCATGGTCAGCGGCAACCTGAACGCCCCCACAATCATGATCGCAGAGAAGGCAGCTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 72 bp AGCAGCAACTGTCTTAGCGCTGGGTGGCCAGCGTCCTaGGCTTGTAGACAGGGACATCTTTGTCCCAGAGTG +
Preference number: 6 (lower is better)
Translates to: SSNCLSAGWPAS*ACRQGHLCPRV
Trigger: CACTCTGGGACAAAGATGTCCCTGTCTACAAGCCCAGGACGCTGGCCACCCAGCGCTAAGACAGTTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CCA 72 bp TGGTCATCCTCCAGCAGCAACTGTCTTAGCGCTGGGTaGCCAGCGTCCTGGGCTTGTAGACAGGGACATCTT +
Preference number: 6 (lower is better)
Translates to: WSSSSSNCLSAG*PASWACRQGHL
Trigger: AAGATGTCCCTGTCTACAAGCCCAGGACGCTGGCCACCCAGCGCTAAGACAGTTGCTGCTGGAGGATGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CAA 72 bp GCCTTCTCTGCGATCATGATTGTGGGGGCGTTCAGGTaGCCGCTGACCATGCTAGGCATGATGGAGGCATCG +
Preference number: 6 (lower is better)
Translates to: AFSAIMIVGAFR*PLTMLGMMEAS
Trigger: CGATGCCTCCATCATGCCTAGCATGGTCAGCGGCAACCTGAACGCCCCCACAATCATGATCGCAGAGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 72 bp GCACTCTGTGACCGGGGCTGGCCTACACACTCTTTGTaGTTGTCTCCGCACCCTGGTTGTCTCAAAGCCTGT +
Preference number: 6 (lower is better)
Translates to: ALCDRGWPTHSL*LSPHPGCLKAC
Trigger: ACAGGCTTTGAGACAACCAGGGTGCGGAGACAATCACAAAGAGTGTGTAGGCCAGCCCCGGTCACAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481668.5
CDS GCA 72 bp TGCAGGCTGCCCCTTGATAATGTCAGCTGCCTTCTCTaGGATCATGATTGTGGGGGCGTTCAGGTTGCCGCT +
Preference number: 6 (lower is better)
Translates to: CRLPLDNVSCLL*DHDCGGVQVAA
Trigger: AGCGGCAACCTGAACGCCCCCACAATCATGATCGCAGAGAAGGCAGCTGACATTATCAAGGGGCAGCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 72 bp GTCCCAGAGTGCAGGCTGCCCCTTGATAATGTCAGCTaGCTTCTCTGCGATCATGATTGTGGGGGCGTTCAG +
Preference number: 6 (lower is better)
Translates to: VPECRLPLDNVS*LLCDHDCGGVQ
Trigger: CTGAACGCCCCCACAATCATGATCGCAGAGAAGGCAGCTGACATTATCAAGGGGCAGCCTGCACTCTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CAA 90 bp GGCCCATCTTACAGGTGCACGAGGGGTGGTAGGCGCTGTCGGCTTTaGCCCGCACAAAGGCATCTATCTCTTTATCTGACTGAATGTGGC +
Preference number: 6 (lower is better)
Translates to: GPSYRCTRGGRRCRL*PAQRHLSLYLTECG
Trigger: GCCACATTCAGTCAGATAAAGAGATAGATGCCTTTGTGCGGGCAAAAGCCGACAGCGCCTACCACCCCTCGTGCACCTGTAAGATGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS GCA 72 bp CCTGGGCTTGTAGACAGGGACATCTTTGTCCCAGAGTaGAGGCTGCCCCTTGATAATGTCAGCTGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: PGLVDRDIFVPE*RLPLDNVSCLL
Trigger: GAGAAGGCAGCTGACATTATCAAGGGGCAGCCTGCACTCTGGGACAAAGATGTCCCTGTCTACAAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 72 bp CTCACATCCAGAAGTGACAGGATACGGTGCACTCTGTaGCCGGGGCTGGCCTACACACTCTTTGTGATTGTC +
Preference number: 6 (lower is better)
Translates to: LTSRSDRIRCTL*PGLAYTLFVIV
Trigger: GACAATCACAAAGAGTGTGTAGGCCAGCCCCGGTCACAGAGTGCACCGTATCCTGTCACTTCTGGATGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315251.11
ENST00000481668.5
CDS TCA 72 bp CTCACATCCAGAAGTGACAGGATACGGTGCACTCTGTaGCCGGGGCTGGCCTACACACTCTTTGTGATTGTG +
Preference number: 6 (lower is better)
Translates to: LTSRSDRIRCTL*PGLAYTLFVIV
Trigger: CACAATCACAAAGAGTGTGTAGGCCAGCCCCGGTCACAGAGTGCACCGTATCCTGTCACTTCTGGATGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467802.1
CDS CAA 72 bp TACAGGTGCACGAGGGGTGGTAGGCGCTGTCGGCTTTaGCCCGCACAAAGGCATCTATCTCTTTATCTGACT +
Preference number: 6 (lower is better)
Translates to: YRCTRGGRRCRL*PAQRHLSLYLT
Trigger: AGTCAGATAAAGAGATAGATGCCTTTGTGCGGGCAAAAGCCGACAGCGCCTACCACCCCTCGTGCACCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS TCA 72 bp GCACTCTGTGACCGGGGCTGGCCTACACACTCTTTGTaGTTGTGGAATGAACGCATGTTAGTGAATGGCTGC +
Preference number: 6 (lower is better)
Translates to: ALCDRGWPTHSL*LWNERMLVNGC
Trigger: GCAGCCATTCACTAACATGCGTTCATTCCACAATCACAAAGAGTGTGTAGGCCAGCCCCGGTCACAGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467802.1
CDS TCA 72 bp TTTGCCCGCACAAAGGCATCTATCTCTTTATCTGACTaGATGTGGCTTCCTGGCTGGAGCTCTTTCCCTCGG +
Preference number: 6 (lower is better)
Translates to: FARTKASISLSD*MWLPGWSSFPR
Trigger: CCGAGGGAAAGAGCTCCAGCCAGGAAGCCACATTCAGTCAGATAAAGAGATAGATGCCTTTGTGCGGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315251.11
CDS CAA 72 bp ACAGGGACATCTTTGTCCCAGAGTGCAGGCTGCCCCTaGATAATGTCAGCTGCCTTCTCTGCGATCATGATT +
Preference number: 6 (lower is better)
Translates to: TGTSLSQSAGCP*IMSAAFSAIMI
Trigger: AATCATGATCGCAGAGAAGGCAGCTGACATTATCAAGGGGCAGCCTGCACTCTGGGACAAAGATGTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315251.11