RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHD8 (Homo sapiens)

Ensembl gene IDs: ENSG00000100888

Ensembl transcript IDs: ENST00000430710.8, ENST00000553283.1, ENST00000553622.5, ENST00000553651.2, ENST00000553870.2, ENST00000554384.1, ENST00000555301.1, ENST00000555935.2, ENST00000555962.6, ENST00000556833.1, ENST00000557329.1, ENST00000557364.6, ENST00000557727.1, ENST00000642518.1, ENST00000642914.1, ENST00000643048.1, ENST00000643469.1, ENST00000645140.1, ENST00000645206.1, ENST00000645929.1, ENST00000646063.1, ENST00000646340.1, ENST00000646558.1, ENST00000646647.2

Found 1779 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCCGAAGCCTAGCTGTTAGGGCAGAGCCCGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACCTGGGCTTCATCTCCATCAATCACT +
Preference number: 1 (lower is better)
Translates to: RRSLAVRAEPGGQNK*PGCWVTWASSPSIT
Trigger: AGTGATTGATGGAGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCCTAACAGCTAGGCTTCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR TCA 90 bp ATGGCCTGGCTGTTGGGTCACCTGGGCTTCATCTCCATCAATCACTaGGATCTCCTCATCCATCATCATCAAGGGATCACCCTCATCATC +
Preference number: 1 (lower is better)
Translates to: MAWLLGHLGFISINH*DLLIHHHQGITLII
Trigger: GATGATGAGGGTGATCCCTTGATGATGATGGATGAGGAGATCTCAGTGATTGATGGAGATGAAGCCCAGGTGACCCAACAGCCAGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR TCA 90 bp GACTTGTCAGCCTCACTGTCCCACCAAGTTGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCATATGTCAATCTCACTGGCAATCGCA +
Preference number: 1 (lower is better)
Translates to: DLSASLSHQVVGTSS*STTGNHMSISLAIA
Trigger: TGCGATTGCCAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCTGACAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 90 bp TCCAATGAGCAGCGACTTGTCAGCCTCACTGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCACTACTGGGAACCATATGTCAATCTC +
Preference number: 1 (lower is better)
Translates to: SNEQRLVSLTVPPSC*NLQLIHYWEPYVNL
Trigger: GAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCTGACAAGTCGCTGCTCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 90 bp CAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTCACAATCTTTATCAAAGTCAACCCC +
Preference number: 1 (lower is better)
Translates to: QGITLIILVLWGTLE*FIFRIFTIFIKVNP
Trigger: GGGGTTGACTTTGATAAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCACCTCCTGGAGTCCTaGACTTCCCCACATCTCCCC +
Preference number: 2 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVHLLES*TSPHLP
Trigger: GGGGAGATGTGGGGAAGTCCAGGACTCCAGGAGGTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCACCTCCTGGAGTCCTaGACTTCCCCACATCTCCCC +
Preference number: 2 (lower is better)
Translates to: QRLGPALHSLWLMEVTREHLLES*TSPHLP
Trigger: GGGGAGATGTGGGGAAGTCCAGGACTCCAGGAGGTG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTCCCCACATCTCCCCTaGCCCTCCCACGTTTCCATA +
Preference number: 2 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESPHLP*PSHVSI
Trigger: TATGGAAACGTGGGAGGGGCAGGGGAGATGTGGGGA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGTGAGCACACCAGCTaGTCTAGTCTCCTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGEHTS*SSLLSF
Trigger: GAAGGAAAGGAGACTAGAGCAGCTGGTGTGCTCACC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAAGGGCCAGAGTAAATaGAAATACAGCAGCCGCCCA +
Preference number: 2 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVKGQSK*KYSSRP
Trigger: TGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCTT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR TCA 90 bp GCAATTTCTTTCAGCTTGAAGGCTGCTTCACAACGCCGCCTTCGCCGGTCCCCAGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCAT +
Preference number: 2 (lower is better)
Translates to: AISFSLKAASQRRLRRSPVGTSS*STTGNH
Trigger: ATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAAC...TGGGGACCGGCGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGGTGAGCACACCAGCTaGTCTAGTCTCCTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTGEHTS*SSLLSF
Trigger: GAAGGAAAGGAGACTAGAGCAGCTGGTGTGCTCACC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGTGAGCACACCAGCTaGTCTAGTCTCCTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGEHTS*SSLLSF
Trigger: GAAGGAAAGGAGACTAGAGCAGCTGGTGTGCTCACC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTCCTTTTCACCTCCTaGAGTCCTGGACTTCCCCAC +
Preference number: 2 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFLFTS*SPGLPH
Trigger: GTGGGGAAGTCCAGGACTCCAGGAGGTGAAAAGGAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTCCTTTTCACCTCCTaGAGTCCTGGACTTCCCCAC +
Preference number: 2 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFLFTS*SPGLPH
Trigger: GTGGGGAAGTCCAGGACTCCAGGAGGTGAAAAGGAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR CCA 90 bp GGGCAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCAGTTGATCCACTACTaGGAACCATATGTCAATCTC +
Preference number: 2 (lower is better)
Translates to: GQSPEARINGLAVGSPGLQLIHY*EPYVNL
Trigger: GAGATTGACATATGGTTCCCAGTAGTGGATCAACTG...AAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAAGGGCCAGAGTAAATaGAAATACAGCAGCCGCCCA +
Preference number: 2 (lower is better)
Translates to: QRLGPALHSLWLMEVTREKGQSK*KYSSRP
Trigger: TGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCTT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR CCA 90 bp CAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCATTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTC +
Preference number: 2 (lower is better)
Translates to: QSPEARINGLAVGSPGLHWGTLE*FIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCA...ATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CCA 90 bp CAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCATCTGGGTCTGCCCTCATaGTATTATATTTCTCATAGC +
Preference number: 2 (lower is better)
Translates to: QSPEARINGLAVGSPGLHLGLPS*YYISHS
Trigger: GCTATGAGAAATATAATACCATGAGGGCAGACCCAG...ATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CAA 90 bp CGACTTGTCAGCCTCACTGTCCCACCAAGTTGTTGGAACCTCCAGTaGATCCACTACTGGGAACCATATGTCAATCTCACTGGCAATCGC +
Preference number: 2 (lower is better)
Translates to: RLVSLTVPPSCWNLQ*IHYWEPYVNLTGNR
Trigger: GCGATTGCCAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCTGACAAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR GCA 90 bp CATCATCAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGCACTCGATGTTCTGCTaGAATTGCTTTGTCATCTGG +
Preference number: 2 (lower is better)
Translates to: HHQGITLIILVLWGTLEWHSMFC*NCFVIW
Trigger: CCAGATGACAAAGCAATTGCAGCAGAACATCGAGTG...CCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CCA 90 bp GCCTTCGCCGGTCCCCACGTTCTGCAGCCTCTATCTTCATTTGTTCTCTCTTGTAACACCTTTTCTGCTTaGTCTCCAATAACCTCCTGC +
Preference number: 2 (lower is better)
Translates to: AFAGPHVLQPLSSFVLSCNTFSA*SPITSC
Trigger: GCAGGAGGTTATTGGAGACCAAGCAGAAAAGGTGTT...ACAAGAGAGAACAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGGCGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGGATTTCATCATGTTaGCCAGGCTTAGAGTCTCTT +
Preference number: 2 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGISSC*PGLESL
Trigger: AAGAGACTCTAAGCCTGGGCAACATGATGAAATCCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
3UTR-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCAATCCTCTCATAATTaGGAGCAATCAGGTACATTT +
Preference number: 2 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEQSSHN*EQSGTF
Trigger: AAATGTACCTGATTGCTCCCAATTATGAGAGGATTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR CAA 90 bp ATGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTGCAATTGCTTaGTCATCTGGTCGGCCAGCCTTTTCTAGGAAACATAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: MSEKLSNTRCSAAIA*SSGRPAFSRKHKAG
Trigger: CCCAGCCTTATGTTTCCTAGAAAAGGCTGGCCGACCAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CCA 90 bp TCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGGATCTTCACAAGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 2 (lower is better)
Translates to: SSWSFGGPWSGLYSGSSQVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...TTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CAA 90 bp CTACTATGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTGCAATaGCTTTGTCATCTGGTCGGCCAGCCTTTTCTAGGAAACATAAGG +
Preference number: 2 (lower is better)
Translates to: LLCQRSYPTLDVLLQ*LCHLVGQPFLGNIR
Trigger: CCTTATGTTTCCTAGAAAAGGCTGGCCGACCAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACATAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR GCA 90 bp AAGTTGTTGGAACCTCCAGTTGATCCACTACTGGGAACCATATGTCAATCTCACTTTCCGGATCCAATCTaGCTTATGGATATCAAAAGT +
Preference number: 2 (lower is better)
Translates to: KLLEPPVDPLLGTICQSHFPDPI*LMDIKS
Trigger: ACTTTTGATATCCATAAGGCAGATTGGATCCGGAAA...GTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CAA 90 bp TACCTTGTTACACTGATGTTTCAAGTGCTTCTTATAACTTTCATCTaGGAACAAAGTGTCAGGGTTATATTTCCGGATCCAATCTGCCTT +
Preference number: 2 (lower is better)
Translates to: YLVTLMFQVLLITFI*EQSVRVIFPDPICL
Trigger: AAGGCAGATTGGATCCGGAAATATAACCCTGACACTTTGTTCCAAGATGAAAGTTATAAGAAGCACTTGAAACATCAGTGTAACAAGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR GCA 72 bp TTTCTCCCGCCGTGCAATTTCTTTCAGCTTGAAGGCTaGTTCACAACGCCGCCTTCGCCGGTCCCCACGTTC +
Preference number: 3 (lower is better)
Translates to: FLPPCNFFQLEG*FTTPPSPVPTF
Trigger: GAACGTGGGGACCGGCGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGCACGGCGGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp CTAGCTGTTAGGGCAGAGCCCGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACCTGGGCTTCATCTCCA +
Preference number: 3 (lower is better)
Translates to: LAVRAEPGGQNK*PGCWVTWASSP
Trigger: TGGAGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCCTAACAGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp GCAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCTCCATCAATCACTGAG +
Preference number: 3 (lower is better)
Translates to: AEPGGQNKWPGC*VTWASSPSITE
Trigger: CTCAGTGATTGATGGAGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CAA 90 bp CCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCATCTCCATCACTGTCCCACCAAGTaGTTGGAACCTCCAGTTGAT +
Preference number: 3 (lower is better)
Translates to: PEARINGLAVGSPGLHLHHCPTK*LEPPVD
Trigger: ATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTG...ATGGAGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp CAGCGACTTGTCAGCCTCACTGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCACTACTGGGAACCATAT +
Preference number: 3 (lower is better)
Translates to: QRLVSLTVPPSC*NLQLIHYWEPY
Trigger: ATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCTGACAAGTCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR TCA 72 bp GCCTCACTGTCCCACCAAGTTGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCATATGTCAATCTCACTG +
Preference number: 3 (lower is better)
Translates to: ASLSHQVVGTSS*STTGNHMSISL
Trigger: CAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp CCACCAAGTTGTTGGAACCTCCAGTTGATCCACTACTaGGAACCATATGTCAATCTCACTGGCAATCGCACC +
Preference number: 3 (lower is better)
Translates to: PPSCWNLQLIHY*EPYVNLTGNRT
Trigger: GGTGCGATTGCCAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CAA 90 bp CAACCCCTTCTACTATGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTGCAATGTTGGAACCTCCAGTaGATCCACTACTGGGAACCA +
Preference number: 3 (lower is better)
Translates to: QPLLLCQRSYPTLDVLLQCWNLQ*IHYWEP
Trigger: TGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACA...TTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACATAGTAGAAGGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CAA 90 bp ATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGGATCTTCACATGTCCCACCAAGTTGTaGGAACCTCCAGTTGATCCA +
Preference number: 3 (lower is better)
Translates to: IILVLWGTLEWFIFRIFTCPTKL*EPPVDP
Trigger: TGGATCAACTGGAGGTTCCAACAACTTGGTGGGACA...TGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp CATCATCAAGGGATCACCCTCATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTTATATTCAGGATCTTC +
Preference number: 3 (lower is better)
Translates to: HHQGITLIILVL*GTLEWFIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CAA 90 bp TCATCAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTCTTATAACTTTCATCTaGGAACAAAGTGTCAGGGTT +
Preference number: 3 (lower is better)
Translates to: SSRDHPHHLGPLGDLGVVLITFI*EQSVRV
Trigger: AACCCTGACACTTTGTTCCAAGATGAAAGTTATAAG...AACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR GCA 72 bp TATGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTaGAATTGCTTTGTCATCTGGTCGGCCAGCCTTTTC +
Preference number: 3 (lower is better)
Translates to: YVREVIQHSMFC*NCFVIWSASLF
Trigger: GAAAAGGCTGGCCGACCAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR GCA 72 bp TACTATGTCAGAGAAGTTATCCAACACTCGATGTTCTaGTGCAATTGCTTTGTCATCTGGTCGGCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: YYVREVIQHSMF*CNCFVIWSASL
Trigger: AAGGCTGGCCGACCAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACATAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp GGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTaGAGTGGTTTATATTCAGGATCTTCACAATCTTTA +
Preference number: 3 (lower is better)
Translates to: GSPSSSWSFGGP*SGLYSGSSQSL
Trigger: TAAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp ACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTCACAATCTTTATCAAA +
Preference number: 3 (lower is better)
Translates to: TLIILVLWGTLE*FIFRIFTIFIK
Trigger: TTTGATAAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCCTGCAGTGGCTGTaGGGGGCCGGTTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLLQWL*GAGSPL
Trigger: GAGGGGCGAACCGGCCCCCCACAGCCACTGCAGGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000430710.8
ENST00000557364.6
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGCGGTAGTCACTGGTaGAGAGGGGTAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGGSHW*RGVARG
Trigger: GCCCCTGGCTACCCCTCTTCACCAGTGACTACCGCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCCTGCAGTGGCTGTaGGGGGCCGGTTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELLQWL*GAGSPL
Trigger: GAGGGGCGAACCGGCCCCCCACAGCCACTGCAGGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000430710.8
ENST00000557364.6
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGGCTGCCGCTGTGCTaGCTGCAGATGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGLPLC*LQMLPP
Trigger: AGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGGCTGCCGCTGTGCTaGCTGCAGATGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGLPLC*LQMLPP
Trigger: AGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCGGCGAAGTTTGGTaGACTGGGCTGCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLGEVW*TGLPLC
Trigger: GCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGCGGTAGTCACTGGTaGAGAGGGGTAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGGSHW*RGVARG
Trigger: GCCCCTGGCTACCCCTCTTCACCAGTGACTACCGCC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGCGGTAGTCACTGGTaGAGAGGGGTAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGGSHW*RGVARG
Trigger: GCCCCTGGCTACCCCTCTTCACCAGTGACTACCGCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTGCCACCAGGGGCTaGGCTGTGCTGGTGATACCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPATRG*AVLVIP
Trigger: AGGTATCACCAGCACAGCTCAGCCCCTGGTGGCAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGGGTGGAGGGTGGCTaGTGGGGCTGTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMWVEGG*WGCGCD
Trigger: ATCGCAGCCACAGCCCCAGCAGCCACCCTCCACCCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGGTGGAGGGTGGCTaGTGGGGCTGTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWVEGG*WGCGCD
Trigger: ATCGCAGCCACAGCCCCAGCAGCCACCCTCCACCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTGGGTGGAGGGTGGCTaGTGGGGCTGTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTWVEGG*WGCGCD
Trigger: ATCGCAGCCACAGCCCCAGCAGCCACCCTCCACCCA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGCCAGGAACAGGCTCTaGCAGAGGCTAGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEARNRL*QRLGPA
Trigger: CGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCTGGC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGCCAGGAACAGGCTCTaGCAGAGGCTAGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTARNRL*QRLGPA
Trigger: CGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCTGGC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGCTGGAGGACCAGCTaGTTTACTGGTCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGWRTS*FTGRLG
Trigger: GCCCAGCCGACCAGTAAAGCAGCTGGTCCTCCAGCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTGGAGGGTGGCTGCTaGGGCTGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVEGGC*GCGCDD
Trigger: ATCATCGCAGCCACAGCCCCAGCAGCCACCCTCCAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCGCCTTCCTCCTCTaGCCGAACGCTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLAFLL*PNAGQL
Trigger: GAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGGTTGGTCGGCTCCTaGCCACCACCTCGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGLVGS*PPPRAL
Trigger: TAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGGTTGGTCGGCTCCTaGCCACCACCTCGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGLVGS*PPPRAL
Trigger: TAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCAGTGGGGGCCCTGTaGCCCCAGGGTTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSVGAL*PQGFQQ
Trigger: CTGCTGGAAACCCTGGGGCCACAGGGCCCCCACTGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCAGTGGGGGCCCTGTaGCCCCAGGGTTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSVGAL*PQGFQQ
Trigger: CTGCTGGAAACCCTGGGGCCACAGGGCCCCCACTGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTCGGCGAAGTTTGGTaGACTGGGCTGCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLGEVW*TGLPLC
Trigger: GCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCGGCGAAGTTTGGTaGACTGGGCTGCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLGEVW*TGLPLC
Trigger: GCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTCGGCGAAGTTTGGTaGACTGGGCTGCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLGEVW*TGLPLC
Trigger: GCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGCGGTAGTCACTGGTaGAGAGGGGTAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGGSHW*RGVARG
Trigger: GCCCCTGGCTACCCCTCTTCACCAGTGACTACCGCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCTTAGGGGCTGACTaGGGTGGCTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGILGAD*GGCPPA
Trigger: TGCTGGAGGGCAGCCACCTCAGTCAGCCCCTAAGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTGCCACCAGGGGCTaGGCTGTGCTGGTGATACCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPATRG*AVLVIP
Trigger: AGGTATCACCAGCACAGCTCAGCCCCTGGTGGCAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCTGCCACCAGGGGCTaGGCTGTGCTGGTGATACCT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPATRG*AVLVIP
Trigger: AGGTATCACCAGCACAGCTCAGCCCCTGGTGGCAGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGCTGGACAATGCGCTaGACAGCAGCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGWTMR*TAAWFP
Trigger: TGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGGTGGAGGGTGGCTaGTGGGGCTGTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWVEGG*WGCGCD
Trigger: ATCGCAGCCACAGCCCCAGCAGCCACCCTCCACCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTRGMF*SPRARA
Trigger: AGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVTRGMF*SPRARA
Trigger: AGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGGTTCATCTCCAGCTaGTGGGGGAAGGCGGCATAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGFISS*WGKAAY
Trigger: GTATGCCGCCTTCCCCCAGCAGCTGGAGATGAACCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGCTGGGCTGGACAATaGGCTGAACAGCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGWAGQ*AEQQPG
Trigger: ACCAGGCTGCTGTTCAGCGCATTGTCCAGCCCAGCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGCTGGAGGACCAGCTaGTTTACTGGTCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGWRTS*FTGRLG
Trigger: GCCCAGCCGACCAGTAAAGCAGCTGGTCCTCCAGCC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTGGAGGGTGGCTGCTaGGGCTGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVEGGC*GCGCDD
Trigger: ATCATCGCAGCCACAGCCCCAGCAGCCACCCTCCAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTGGAGGGTGGCTGCTaGGGCTGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVEGGC*GCGCDD
Trigger: ATCATCGCAGCCACAGCCCCAGCAGCCACCCTCCAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTCGCCTTCCTCCTCTaGCCGAACGCTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLAFLL*PNAGQL
Trigger: GAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTCGCCTTCCTCCTCTaGCCGAACGCTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELAFLL*PNAGQL
Trigger: GAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTCGCCTTCCTCCTCTaGCCGAACGCTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELAFLL*PNAGQL
Trigger: GAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTTTGGCTCACCCCATaGCGGGCTGCCCCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVWLTP*RAAPLR
Trigger: TCTAAGAGGGGCAGCCCGCCATGGGGTGAGCCAAAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCCAGACTGGGGACCTaGGTAGCTGTCTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSRLGT*VAVSSG
Trigger: ACCCGAGGAGACAGCTACCCAGGTCCCCAGTCTGGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTGGTCGGCTCCTaGCCACCACCTCGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGLVGS*PPPRAL
Trigger: TAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCCCTCCAGCACTACTaGAGGAGACAGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVALQHY*RRQLWQ
Trigger: CTGCCACAGCTGTCTCCTCCAGTAGTGCTGGAGGGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCAGTGGGGGCCCTGTaGCCCCAGGGTTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESVGAL*PQGFQQ
Trigger: CTGCTGGAAACCCTGGGGCCACAGGGCCCCCACTGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCTGGAGGACCAGGGTaGTGCGTTTCGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVAGGPG*CVSIHP
Trigger: AGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCTGGAGGACCAGGGTaGTGCGTTTCGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAGGPG*CVSIHP
Trigger: AGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGGCATTCTTGGCTTaGGTCAGGGCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWAFLA*VRAASW
Trigger: CCAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGGGCATTCTTGGCTTaGGTCAGGGCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREWAFLA*VRAASW
Trigger: CCAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGTATGCGCCTGGGATaGGGCGTCCCCGTGAATCTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVCMRLG*GVPVNL
Trigger: AAGATTCACGGGGACGCCTCATCCCAGGCGCATACA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTCTGCCCAATTCGATaGCATCGTGCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLCPIR*HRAWAC
Trigger: GCAGGCCCAGGCACGATGTCATCGAATTGGGCAGAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCTGCCCAATTCGATaGCATCGTGCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLCPIR*HRAWAC
Trigger: GCAGGCCCAGGCACGATGTCATCGAATTGGGCAGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCAGGACCAGGAGGCTaGCACAATGCCAGCCGATCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSGPGG*HNASRS
Trigger: AGATCGGCTGGCATTGTGTCAGCCTCCTGGTCCTGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGGAGTAGAGCAGCGTaGCAAGGATGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVWSRAA*QGWSWC
Trigger: GCACCAGCTCCATCCTTGTCACGCTGCTCTACTCCA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTCATCCTCCAGTTTaGCTGGTGGAACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPHPPV*LVEHSG
Trigger: CCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGAAGGCCACTTCCCTaGGAGTACAGCCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRRPLP*EYSLAD
Trigger: GTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGGCTGCCGCTGTGCTaGCTGCAGATGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGLPLC*LQMLPP
Trigger: AGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCGGCGAAGTTTGGTaGACTGGGCTGCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELGEVW*TGLPLC
Trigger: GCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATCTTAGGGGCTGACTaGGGTGGCTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLILGAD*GGCPPA
Trigger: TGCTGGAGGGCAGCCACCTCAGTCAGCCCCTAAGAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATCTTAGGGGCTGACTaGGGTGGCTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTILGAD*GGCPPA
Trigger: TGCTGGAGGGCAGCCACCTCAGTCAGCCCCTAAGAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAACAATCTTAGGGGCTaGCTGAGGTGGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGNNLRG*LRWLPS
Trigger: GGAGGGCAGCCACCTCAGTCAGCCCCTAAGATTGTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGCTGGACAATGCGCTaGACAGCAGCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGWTMR*TAAWFP
Trigger: TGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGCTGGACAATGCGCTaGACAGCAGCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGWTMR*TAAWFP
Trigger: TGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMTRGMF*SPRARA
Trigger: AGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTRGMF*SPRARA
Trigger: AGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGATGACGGTCATGTCTaGGGGAGCGTGGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDDGHV*GSVAAH
Trigger: ATGAGCGGCCACGCTCCCGCAGACATGACCGTCATC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGATGACGGTCATGTCTaGGGGAGCGTGGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDDGHV*GSVAAH
Trigger: ATGAGCGGCCACGCTCCCGCAGACATGACCGTCATC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGATGACGGTCATGTCTaGGGGAGCGTGGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTDDGHV*GSVAAH
Trigger: ATGAGCGGCCACGCTCCCGCAGACATGACCGTCATC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTCATCTCCAGCTaGTGGGGGAAGGCGGCATAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGFISS*WGKAAY
Trigger: GTATGCCGCCTTCCCCCAGCAGCTGGAGATGAACCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGCCGCTGTGCTGACTaGAGATGCTTCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCRCAD*RCFLLC
Trigger: GCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCCCCACATCTCCCCTaGCCCTCCCACGTTTCCATA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSPHLP*PSHVSI
Trigger: TATGGAAACGTGGGAGGGGCAGGGGAGATGTGGGGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCCACCATTGGCTGTaGCTGCCACCAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFHHWL*LPPGAE
Trigger: CTCAGCCCCTGGTGGCAGGCACAGCCAATGGTGGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTCCACCATTGGCTGTaGCTGCCACCAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREFHHWL*LPPGAE
Trigger: CTCAGCCCCTGGTGGCAGGCACAGCCAATGGTGGAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGCTGGGCTGGACAATaGGCTGAACAGCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGWAGQ*AEQQPG
Trigger: ACCAGGCTGCTGTTCAGCGCATTGTCCAGCCCAGCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGAGGTCAGTGTAACTaGAGGCTTCAGTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRGQCN*RLQWGP
Trigger: GGGCCCCCACTGAAGCCTGCAGTTACACTGACCTCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACATGCCGATGTCCTTaGGGACCTCCAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVTCRCP*GPPDCG
Trigger: GCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACATGCCGATGTCCTTaGGGACCTCCAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTCRCP*GPPDCG
Trigger: GCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCCCTTGGGCATTCTTaGCTTGAGTCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVALGHS*LESGLP
Trigger: TGGCAGCCCTGACTCAAGCCAAGAATGCCCAAGGGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTGGAGGGTGGCTGCTaGGGCTGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVEGGC*GCGCDD
Trigger: ATCATCGCAGCCACAGCCCCAGCAGCCACCCTCCAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGAAGAGCCAGCCTGTaGCTGCAGTACCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGRASL*LQYHLD
Trigger: GTCAAGGTGGTACTGCAGCCACAGGCTGGCTCTTCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTTTGGCTCACCCCATaGCGGGCTGCCCCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVWLTP*RAAPLR
Trigger: TCTAAGAGGGGCAGCCCGCCATGGGGTGAGCCAAAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCCAGACTGGGGACCTaGGTAGCTGTCTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSRLGT*VAVSSG
Trigger: ACCCGAGGAGACAGCTACCCAGGTCCCCAGTCTGGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCCAGACTGGGGACCTaGGTAGCTGTCTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSRLGT*VAVSSG
Trigger: ACCCGAGGAGACAGCTACCCAGGTCCCCAGTCTGGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGGTTGGTCGGCTCCTaGCCACCACCTCGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGLVGS*PPPRAL
Trigger: TAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATAGTCTTGTGGGGTTaGTCGGCTCCTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIVLWG*SAPGHH
Trigger: GTGGTGGCCAGGAGCCGACCAACCCCACAAGACTAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATAGTCTTGTGGGGTTaGTCGGCTCCTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVIVLWG*SAPGHH
Trigger: GTGGTGGCCAGGAGCCGACCAACCCCACAAGACTAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCACCTCCTGGAGTCCTaGACTTCCCCACATCTCCCC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTHLLES*TSPHLP
Trigger: GGGGAGATGTGGGGAAGTCCAGGACTCCAGGAGGTG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGAGTCCAGAGAGCTTaGCAGTCCAAGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGVQRA*QSKGFL
Trigger: GAGGAAGCCCTTGGACTGCCAAGCTCTCTGGACTCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTCTGTAAGACAGGTTaGGCTGGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVCKTG*AGCSWL
Trigger: CAGCCAGGAGCAGCCAGCCCAACCTGTCTTACAGAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCCCTCCAGCACTACTaGAGGAGACAGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLALQHY*RRQLWQ
Trigger: CTGCCACAGCTGTCTCCTCCAGTAGTGCTGGAGGGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGCTGGAGGACCAGGGTaGTGCGTTTCGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEAGGPG*CVSIHP
Trigger: AGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGGCATTCTTGGCTTaGGTCAGGGCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWAFLA*VRAASW
Trigger: CCAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGGCTGTGGCTGCGATaGTGGTGGTTGTGGTACAAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGLWLR*WWLWYN
Trigger: ATTGTACCACAACCACCATCATCGCAGCCACAGCCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTGGTCCCATTATCTaGGCCTGCTGTACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPGPII*ACCTED
Trigger: GTCCTCTGTACAGCAGGCTCAGATAATGGGACCAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGACAGTGGGGCAATaGCCAAGAAGGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWTVGQ*PRRDHG
Trigger: TCCATGGTCCCTTCTTGGTCATTGCCCCACTGTCCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGGACAGTGGGGCAATaGCCAAGAAGGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVWTVGQ*PRRDHG
Trigger: TCCATGGTCCCTTCTTGGTCATTGCCCCACTGTCCA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGTATGCGCCTGGGATaGGGCGTCCCCGTGAATCTT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRECMRLG*GVPVNL
Trigger: AAGATTCACGGGGACGCCTCATCCCAGGCGCATACA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTATGCGCCTGGGATaGGGCGTCCCCGTGAATCTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCMRLG*GVPVNL
Trigger: AAGATTCACGGGGACGCCTCATCCCAGGCGCATACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAACCAGTTTGCCGGCTaGACGAACCATGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTNQFAG*TNHGLQ
Trigger: CTGCAGGCCATGGTTCGTTCAGCCGGCAAACTGGTT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAACCAGTTTGCCGGCTaGACGAACCATGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLNQFAG*TNHGLQ
Trigger: CTGCAGGCCATGGTTCGTTCAGCCGGCAAACTGGTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAACCAGTTTGCCGGCTaGACGAACCATGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRENQFAG*TNHGLQ
Trigger: CTGCAGGCCATGGTTCGTTCAGCCGGCAAACTGGTT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGAAGACAAAGCGGTCTaGGTCAGGCTTGCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVEDKAV*VRLAEA
Trigger: CGCTTCAGCAAGCCTGACTCAGACCGCTTTGTCTTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAAGACAAAGCGGTCTaGGTCAGGCTTGCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEDKAV*VRLAEA
Trigger: CGCTTCAGCAAGCCTGACTCAGACCGCTTTGTCTTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCTGCCCAATTCGATaGCATCGTGCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELCPIR*HRAWAC
Trigger: GCAGGCCCAGGCACGATGTCATCGAATTGGGCAGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTGCTTCACAACGCCGCCTTCGCCGGTCCCCACGTTCTGCAGCCTCTATCTCAATTTCTTTCAGCTTaGAGGCTGCTTCACAACGCC +
Preference number: 4 (lower is better)
Translates to: RLLHNAAFAGPHVLQPLSQFLSA*RLLHNA
Trigger: GGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTG...AGATAGAGGCTGCAGAACGTGGGGACCGGCGAAGGCGGCGTTGTGAAGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACGGTAGAGAGTCCGTaGGGCTCTCTCCTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTVESP*GSLLSD
Trigger: ATCACTGAGGAGAGAGCCTCACGGACTCTCTACCGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCAGGACCAGGAGGCTaGCACAATGCCAGCCGATCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSGPGG*HNASRS
Trigger: AGATCGGCTGGCATTGTGTCAGCCTCCTGGTCCTGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTCAGGACCAGGAGGCTaGCACAATGCCAGCCGATCT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESGPGG*HNASRS
Trigger: AGATCGGCTGGCATTGTGTCAGCCTCCTGGTCCTGA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGGAGTAGAGCAGCGTaGCAAGGATGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMWSRAA*QGWSWC
Trigger: GCACCAGCTCCATCCTTGTCACGCTGCTCTACTCCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGAGTAGAGCAGCGTaGCAAGGATGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWSRAA*QGWSWC
Trigger: GCACCAGCTCCATCCTTGTCACGCTGCTCTACTCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTGGAGTAGAGCAGCGTaGCAAGGATGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTWSRAA*QGWSWC
Trigger: GCACCAGCTCCATCCTTGTCACGCTGCTCTACTCCA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCTCATCCTCCAGTTTaGCTGGTGGAACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPHPPV*LVEHSG
Trigger: CCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTCATCCTCCAGTTTaGCTGGTGGAACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPHPPV*LVEHSG
Trigger: CCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCTCATCCTCCAGTTTaGCTGGTGGAACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPHPPV*LVEHSG
Trigger: CCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGAAGGCCACTTCCCTaGGAGTACAGCCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTRRPLP*EYSLAD
Trigger: GTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGAAGGCCACTTCCCTaGGAGTACAGCCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRRPLP*EYSLAD
Trigger: GTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTTTCCAGCAGGAGCTaGACCCTTAACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVSSRS*TLNWLE
Trigger: CTCCAGCCAGTTAAGGGTTCAGCTCCTGCTGGAAAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCCCTAGCACAACATaGCGATGTCCTTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLPSTT*RCPWGP
Trigger: AGGTCCCCAAGGACATCGGCATGTTGTGCTAGGGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACTACCTTGGCAGGCTaGCCTTGGGCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTTLAG*PWAFLA
Trigger: AGCCAAGAATGCCCAAGGGCAGCCTGCCAAGGTAGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTACCTTGGCAGGCTaGCCTTGGGCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVTTLAG*PWAFLA
Trigger: AGCCAAGAATGCCCAAGGGCAGCCTGCCAAGGTAGT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGGGTGGAGGGTGGCTaGTGGGGCTGTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTWVEGG*WGCGCD
Trigger: ATCGCAGCCACAGCCCCAGCAGCCACCCTCCACCCA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGAGCCAGCCTGTGGCTaGAGTACCACCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTEPACG*STTLTG
Trigger: ACCAGTCAAGGTGGTACTGCAGCCACAGGCTGGCTC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGAGCCAGCCTGTGGCTaGAGTACCACCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLEPACG*STTLTG
Trigger: ACCAGTCAAGGTGGTACTGCAGCCACAGGCTGGCTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGAGCCAGCCTGTGGCTaGAGTACCACCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREEPACG*STTLTG
Trigger: ACCAGTCAAGGTGGTACTGCAGCCACAGGCTGGCTC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAGCGTCAAACTTGTATaGGCCTGGGATGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSVKLV*AWDEAS
Trigger: GGACGCCTCATCCCAGGCGCATACAAGTTTGACGCT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGCGTCAAACTTGTATaGGCCTGGGATGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSVKLV*AWDEAS
Trigger: GGACGCCTCATCCCAGGCGCATACAAGTTTGACGCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCCGAAAGCAGTCAGTaGGCCCATAGGCATGATGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPESSQ*AHRHDD
Trigger: GTCATCATGCCTATGGGCGCACTGACTGCTTTCGGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGGTTCATCTCCAGCTaGTGGGGGAAGGCGGCATAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGFISS*WGKAAY
Trigger: GTATGCCGCCTTCCCCCAGCAGCTGGAGATGAACCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCAGTGGTGAGGCAGTaGGTGAGGTATACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAVVRQ*VRYTAG
Trigger: ACCAGCAGTATACCTCACGCACTGCCTCACCACTGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCAGTGGTGAGGCAGTaGGTGAGGTATACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVAVVRQ*VRYTAG
Trigger: ACCAGCAGTATACCTCACGCACTGCCTCACCACTGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTCACTCTCATCAGTaGTGGAGCTGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPHSHQ*WSWSWM
Trigger: CATCCAGCTCCAGCTCCAGCACTGATGAGAGTGAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCTCACTCTCATCAGTaGTGGAGCTGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPHSHQ*WSWSWM
Trigger: CATCCAGCTCCAGCTCCAGCACTGATGAGAGTGAGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGCCGCTGTGCTGACTaGAGATGCTTCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMCRCAD*RCFLLC
Trigger: GCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTGCCGCTGTGCTGACTaGAGATGCTTCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMECRCAD*RCFLLC
Trigger: GCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFGELG*RCADCR
Trigger: TCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCATCCTCCTCAGGTTaGAGTGGTGGCAACCGCAAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSSSSG*SGGNRK
Trigger: CTTGCGGTTGCCACCACTGCAACCTGAGGAGGATGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAAGCAATGGGGCCCATaGTGGGGCTTCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGKQWGP*WGFSHQ
Trigger: CTGATGACTGAAGCCCCAGCATGGGCCCCATTGCTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAAGCAATGGGGCCCATaGTGGGGCTTCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVKQWGP*WGFSHQ
Trigger: CTGATGACTGAAGCCCCAGCATGGGCCCCATTGCTT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCCCCACATCTCCCCTaGCCCTCCCACGTTTCCATA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSPHLP*PSHVSI
Trigger: TATGGAAACGTGGGAGGGGCAGGGGAGATGTGGGGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTCCCCACATCTCCCCTaGCCCTCCCACGTTTCCATA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESPHLP*PSHVSI
Trigger: TATGGAAACGTGGGAGGGGCAGGGGAGATGTGGGGA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTCCACCATTGGCTGTaGCTGCCACCAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFHHWL*LPPGAE
Trigger: CTCAGCCCCTGGTGGCAGGCACAGCCAATGGTGGAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACATGCCGATGTCCTTaGGGACCTCCAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTCRCP*GPPDCG
Trigger: GCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGTCAGGGCTGCCAGCTaGTTGCCCTGTAACACTATC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVVRAAS*LPCNTI
Trigger: GATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGAC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTCAGGGCTGCCAGCTaGTTGCCCTGTAACACTATC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVRAAS*LPCNTI
Trigger: GATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCCCTTGGGCATTCTTaGCTTGAGTCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLALGHS*LESGLP
Trigger: TGGCAGCCCTGACTCAAGCCAAGAATGCCCAAGGGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGCCCTTGGGCATTCTTaGCTTGAGTCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMALGHS*LESGLP
Trigger: TGGCAGCCCTGACTCAAGCCAAGAATGCCCAAGGGC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGGAAGAGCCAGCCTGTaGCTGCAGTACCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREGRASL*LQYHLD
Trigger: GTCAAGGTGGTACTGCAGCCACAGGCTGGCTCTTCC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGAAGAGCCAGCCTGTaGCTGCAGTACCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGRASL*LQYHLD
Trigger: GTCAAGGTGGTACTGCAGCCACAGGCTGGCTCTTCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGAAGAGCCAGCCTGTaGCTGCAGTACCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGRASL*LQYHLD
Trigger: GTCAAGGTGGTACTGCAGCCACAGGCTGGCTCTTCC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCACGGGCTCTCGCAATaGCCTCTGCTACAATCCGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHGLSQ*PLLQSD
Trigger: ATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPLAER*ATRPHL
Trigger: TAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATGTCTGCGGGAGCGTaGCCGCTCATCATCCTCACT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLMSAGA*PLIILT
Trigger: AGTGAGGATGATGAGCGGCCACGCTCCCGCAGACAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATGTCTGCGGGAGCGTaGCCGCTCATCATCCTCACT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTMSAGA*PLIILT
Trigger: AGTGAGGATGATGAGCGGCCACGCTCCCGCAGACAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGGQNK*PGCWVT
Trigger: GGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVRKRSQ*NCMVSG
Trigger: CCCTGACACCATGCAGTTCCATTGGGATCGCTTCCG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRKRSQ*NCMVSG
Trigger: CCCTGACACCATGCAGTTCCATTGGGATCGCTTCCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGAAGGCGGCATACTTaGCGGCACATGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGRRHT*RHMATK
Trigger: CTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGAAGGCGGCATACTTaGCGGCACATGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGRRHT*RHMATK
Trigger: CTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGGAAGGCGGCATACTTaGCGGCACATGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREGRRHT*RHMATK
Trigger: CTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAGGCTCCCACCATTTaGGCAATTCAGGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQAPTI*AIQDQE
Trigger: CTCCTGGTCCTGAATTGCCCAAATGGTGGGAGCCTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATGTTGCAGTCTGTTTaGCTCACCCCATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVMLQSV*LTPWRA
Trigger: AGCCCGCCATGGGGTGAGCCAAACAGACTGCAACAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCCAGACTGGGGACCTaGGTAGCTGTCTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESRLGT*VAVSSG
Trigger: ACCCGAGGAGACAGCTACCCAGGTCCCCAGTCTGGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATAGTCTTGTGGGGTTaGTCGGCTCCTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEIVLWG*SAPGHH
Trigger: GTGGTGGCCAGGAGCCGACCAACCCCACAAGACTAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATAGTCTTGTGGGGTTaGTCGGCTCCTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLIVLWG*SAPGHH
Trigger: GTGGTGGCCAGGAGCCGACCAACCCCACAAGACTAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCATCTCATAGTCTTGTaGGGTTGGTCGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVHLIVL*GWSAPG
Trigger: GCCAGGAGCCGACCAACCCCACAAGACTATGAGATG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCACTCTCATCAGTGCTaGAGCTGGAGCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHSHQC*SWSWMR
Trigger: CCTCATCCAGCTCCAGCTCCAGCACTGATGAGAGTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTGAGAGTACAGCCTaGCAGACGAGGTCAATACGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPESTA*QTRSIR
Trigger: CCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGAAGTTTGGTGAACTaGGCTGCCGCTGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRSLVN*AAAVLT
Trigger: AGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCATCTTAGAAAGGTCTaGTCGCATCCTACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHLRKV*SHPTGP
Trigger: CGGGCCCGTAGGATGCGACCAGACCTTTCTAAGATG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGGGGCTCTCAAGCCTaGATGGTGATGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRGSQA*MVMVVM
Trigger: CATCACCACCATCACCATCCAGGCTTGAGAGCCCCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCAGGTTGCAGTGGTaGCAACCGCAAGGTAGTACC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLRLQW*QPQGST
Trigger: GGTACTACCTTGCGGTTGCCACCACTGCAACCTGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTCAGGTTGCAGTGGTaGCAACCGCAAGGTAGTACC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLRLQW*QPQGST
Trigger: GGTACTACCTTGCGGTTGCCACCACTGCAACCTGAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCCTCAGGTTGCAGTaGTGGCAACCGCAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLLRLQ*WQPQGS
Trigger: ACTACCTTGCGGTTGCCACCACTGCAACCTGAGGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTCCTCAGGTTGCAGTaGTGGCAACCGCAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLLRLQ*WQPQGS
Trigger: ACTACCTTGCGGTTGCCACCACTGCAACCTGAGGAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAATGGGGCCCATGCTaGGGCTTCAGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQWGPC*GFSHQH
Trigger: ATGCTGATGACTGAAGCCCCAGCATGGGCCCCATTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGAGTCCAGAGAGCTTaGCAGTCCAAGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGVQRA*QSKGFL
Trigger: GAGGAAGCCCTTGGACTGCCAAGCTCTCTGGACTCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGGAGCTGTTTCCTCTaGTGGAGGGACCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGSCFL*WRDQFT
Trigger: AGTGAACTGGTCCCTCCACCAGAGGAAACAGCTCCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGGAGCTGTTTCCTCTaGTGGAGGGACCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGSCFL*WRDQFT
Trigger: AGTGAACTGGTCCCTCCACCAGAGGAAACAGCTCCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGGCTGCTCCTGGCTaGCAGGCTGAGTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLAAPG*QAEWYN
Trigger: ATTATACCACTCAGCCTGCCAGCCAGGAGCAGCCAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTCTGTAAGACAGGTTaGGCTGGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVCKTG*AGCSWL
Trigger: CAGCCAGGAGCAGCCAGCCCAACCTGTCTTACAGAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCCCTCCAGCACTACTaGAGGAGACAGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEALQHY*RRQLWQ
Trigger: CTGCCACAGCTGTCTCCTCCAGTAGTGCTGGAGGGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGTTCCCAGGGACCTTaGCGGCCAACACTGTATTAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGSQGP*RPTLYY
Trigger: GTAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCTTTACTGGTCGGCTaGGCTGGACAATGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGALLVG*AGQCAE
Trigger: TTCAGCGCATTGTCCAGCCCAGCCGACCAGTAAAGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGACCAGCTGCTTTACTaGTCGGCTGGGCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDQLLY*SAGLDN
Trigger: ATTGTCCAGCCCAGCCGACCAGTAAAGCAGCTGGTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTCAGTGGGGGCCCTGTaGCCCCAGGGTTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSVGAL*PQGFQQ
Trigger: CTGCTGGAAACCCTGGGGCCACAGGGCCCCCACTGA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCTGGAGGACCAGGGTaGTGCGTTTCGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEAGGPG*CVSIHP
Trigger: AGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGGGCTGTGGCTGCGATaGTGGTGGTTGTGGTACAAT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTGLWLR*WWLWYN
Trigger: ATTGTACCACAACCACCATCATCGCAGCCACAGCCC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGTGGCTGCGATaGTGGTGGTTGTGGTACAAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGLWLR*WWLWYN
Trigger: ATTGTACCACAACCACCATCATCGCAGCCACAGCCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCTGGTCCCATTATCTaGGCCTGCTGTACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPGPII*ACCTED
Trigger: GTCCTCTGTACAGCAGGCTCAGATAATGGGACCAGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTGGTCCCATTATCTaGGCCTGCTGTACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPGPII*ACCTED
Trigger: GTCCTCTGTACAGCAGGCTCAGATAATGGGACCAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGGACAGTGGGGCAATaGCCAAGAAGGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMWTVGQ*PRRDHG
Trigger: TCCATGGTCCCTTCTTGGTCATTGCCCCACTGTCCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGAAGACAAAGCGGTCTaGGTCAGGCTTGCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTEDKAV*VRLAEA
Trigger: CGCTTCAGCAAGCCTGACTCAGACCGCTTTGTCTTC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGAAGACAAAGCGGTCTaGGTCAGGCTTGCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEEDKAV*VRLAEA
Trigger: CGCTTCAGCAAGCCTGACTCAGACCGCTTTGTCTTC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ATCATCAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTCTCTGCCCAATTCGATaGCATCGTGCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: IIKGSPSSSWSFGGPWSGLCPIR*HRAWAC
Trigger: GCAGGCCCAGGCACGATGTCATCGAATTGGGCAGAG...ACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGACGGTAGAGAGTCCGTaGGGCTCTCTCCTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMETVESP*GSLLSD
Trigger: ATCACTGAGGAGAGAGCCTCACGGACTCTCTACCGT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGAGTAGAGCAGCGTaGCAAGGATGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWSRAA*QGWSWC
Trigger: GCACCAGCTCCATCCTTGTCACGCTGCTCTACTCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGCTGTCTCCTCGGGTaGCTTTTCAACAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSCLLG*LFNRSI
Trigger: GATGCTCCTGTTGAAAAGTCACCCGAGGAGACAGCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGAAGGCCACTTCCCTaGGAGTACAGCCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERRPLP*EYSLAD
Trigger: GTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAAGTGGCACTGCTGTaGCCCAAAGATGACACAGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEVALL*PKDDTD
Trigger: GTCTGTGTCATCTTTGGGTCACAGCAGTGCCACTTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCATCCTGGTTCATCTaGTCCAAGGAGTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPSWFI*SKESRE
Trigger: CTCTCTGGACTCCTTGGATCAGATGAACCAGGATGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAACAATCTTAGGGGCTaGCTGAGGTGGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNENNLRG*LRWLPS
Trigger: GGAGGGCAGCCACCTCAGTCAGCCCCTAAGATTGTT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCATCGAACAGATCCATaGTGGGGTCTGCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHRTDP*WGLPSW
Trigger: CCAAGATGGCAGACCCCATCATGGATCTGTTCGATG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTGATACCTTGGGCCTaGATTTGTGCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVIPWA*ICATWA
Trigger: TGCCCATGTGGCACAAATTCAGGCCCAAGGTATCAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCTGAGCTGTGCTGGTaGTACCTTGGGCCTGAATTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAELCW*YLGPEF
Trigger: AAATTCAGGCCCAAGGTATCACCAGCACAGCTCAGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCTGCCACCAGGGGCTaGGCTGTGCTGGTGATACCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPATRG*AVLVIP
Trigger: AGGTATCACCAGCACAGCTCAGCCCCTGGTGGCAGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTTTCCAGCAGGAGCTaGACCCTTAACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVSSRS*TLNWLE
Trigger: CTCCAGCCAGTTAAGGGTTCAGCTCCTGCTGGAAAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTTTCCAGCAGGAGCTaGACCCTTAACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVSSRS*TLNWLE
Trigger: CTCCAGCCAGTTAAGGGTTCAGCTCCTGCTGGAAAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCCCTAGCACAACATaGCGATGTCCTTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLPSTT*RCPWGP
Trigger: AGGTCCCCAAGGACATCGGCATGTTGTGCTAGGGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACTACCTTGGCAGGCTaGCCTTGGGCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTTLAG*PWAFLA
Trigger: AGCCAAGAATGCCCAAGGGCAGCCTGCCAAGGTAGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTACTACCTTGGCAGGCTaGCCTTGGGCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTTTLAG*PWAFLA
Trigger: AGCCAAGAATGCCCAAGGGCAGCCTGCCAAGGTAGT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGTGGCTGCTGCACCTaGAGCTGGATAGTTACTACC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVCGCCT*SWIVTT
Trigger: GGTAGTAACTATCCAGCTGCAGGTGCAGCAGCCACA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTGGCTGCTGCACCTaGAGCTGGATAGTTACTACC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCGCCT*SWIVTT
Trigger: GGTAGTAACTATCCAGCTGCAGGTGCAGCAGCCACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTTCTTCCAGGCACTTaGCTGCGGACGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVFLPGT*LRTIHP
Trigger: AGGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTTGAATCATCTGCCTaGTGGCCAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVESSA*WPDCHG
Trigger: ACCATGGCAGTCTGGCCAGCAGGCAGATGATTCAAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCCGAAAGCAGTCAGTaGGCCCATAGGCATGATGAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPESSQ*AHRHDD
Trigger: GTCATCATGCCTATGGGCGCACTGACTGCTTTCGGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCCGAAAGCAGTCAGTaGGCCCATAGGCATGATGAC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPESSQ*AHRHDD
Trigger: GTCATCATGCCTATGGGCGCACTGACTGCTTTCGGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCGGTCCCCACGTTCTaGAGCCTCTATCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPVPTF*SLYLHL
Trigger: CAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCGGTCCCCACGTTCTaGAGCCTCTATCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPVPTF*SLYLHL
Trigger: CAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTTCAGCTTGAAGGCTaGTTCACAACGCCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVFQLEG*FTTPPS
Trigger: CGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTTCAGCTTGAAGGCTaGTTCACAACGCCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFQLEG*FTTPPS
Trigger: CGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGAAGCTCCCCATCATaGCGAACAGGCTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRSSPS*RTGSHH
Trigger: ATGGTGGGAGCCTGTTCGGCATGATGGGGAGCTTCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAGAAGCTCCCCATCATaGCGAACAGGCTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRSSPS*RTGSHH
Trigger: ATGGTGGGAGCCTGTTCGGCATGATGGGGAGCTTCT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAAGGATGGAGCTGGTaGTCCTGCTTGATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQGWSW*SCLMVL
Trigger: CAGAACCATCAAGCAGGAGCACCAGCTCCATCCTTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEVYCW*SSGVEQ
Trigger: CTGCTCTACTCCACTGCTGCACCAGCAGTATACCTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTGCGTGAGGTATACTaGTGGTGCAGCAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVREVY*WCSSGV
Trigger: TACTCCACTGCTGCACCAGCAGTATACCTCACGCAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGCAGTGGTGAGGCAGTaGGTGAGGTATACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREAVVRQ*VRYTAG
Trigger: ACCAGCAGTATACCTCACGCACTGCCTCACCACTGC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCAGTGGTGAGGCAGTaGGTGAGGTATACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLAVVRQ*VRYTAG
Trigger: ACCAGCAGTATACCTCACGCACTGCCTCACCACTGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCTCACTCTCATCAGTaGTGGAGCTGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPHSHQ*WSWSWM
Trigger: CATCCAGCTCCAGCTCCAGCACTGATGAGAGTGAGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCTCACTCTCATCAGTaGTGGAGCTGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPHSHQ*WSWSWM
Trigger: CATCCAGCTCCAGCTCCAGCACTGATGAGAGTGAGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVCADCR*FLLCHG
Trigger: TCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCADCR*FLLCHG
Trigger: TCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGCCGCTGTGCTGACTaGAGATGCTTCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECRCAD*RCFLLC
Trigger: GCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFGELG*RCADCR
Trigger: TCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMFGELG*RCADCR
Trigger: TCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFGELG*RCADCR
Trigger: TCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTGCTGCTCTCTGGTaGAATAGGCCCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLAALW*NRPWQN
Trigger: GTTTTGCCAGGGCCTATTGCACCAGAGAGCAGCAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCAGTGCTTCCACCCTaGATGAGGGCCATCATCTTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPVLPP*MRAIIL
Trigger: TAAGATGATGGCCCTCATGCAGGGTGGAAGCACTGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGTGATGAAGCATGGTaGTGGAGTCTACATGAGGGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGDEAW*WSLHEG
Trigger: CCCCTCATGTAGACTCCAGCACCATGCTTCATCACC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGTGATGAAGCATGGTaGTGGAGTCTACATGAGGGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGDEAW*WSLHEG
Trigger: CCCCTCATGTAGACTCCAGCACCATGCTTCATCACC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCATCCTCCTCAGGTTaGAGTGGTGGCAACCGCAAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSSSSG*SGGNRK
Trigger: CTTGCGGTTGCCACCACTGCAACCTGAGGAGGATGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAAGCAATGGGGCCCATaGTGGGGCTTCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEKQWGP*WGFSHQ
Trigger: CTGATGACTGAAGCCCCAGCATGGGCCCCATTGCTT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAAGCAATGGGGCCCATaGTGGGGCTTCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLKQWGP*WGFSHQ
Trigger: CTGATGACTGAAGCCCCAGCATGGGCCCCATTGCTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCCCCACATCTCCCCTaGCCCTCCCACGTTTCCATA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESPHLP*PSHVSI
Trigger: TATGGAAACGTGGGAGGGGCAGGGGAGATGTGGGGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGTGAGCACACCAGCTaGTCTAGTCTCCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGEHTS*SSLLSF
Trigger: GAAGGAAAGGAGACTAGAGCAGCTGGTGTGCTCACC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTGGGCCTGAATTTGTaGCACATGGGCACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLGLNL*HMGTSD
Trigger: GTCACTGGTGCCCATGTGGCACAAATTCAGGCCCAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGCTGGAGGACCAGCTaGTTTACTGGTCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGWRTS*FTGRLG
Trigger: GCCCAGCCGACCAGTAAAGCAGCTGGTCCTCCAGCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGAGGTCAGTGTAACTaGAGGCTTCAGTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERGQCN*RLQWGP
Trigger: GGGCCCCCACTGAAGCCTGCAGTTACACTGACCTCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAACATGCCGATGTCCTTaGGGACCTCCAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNETCRCP*GPPDCG
Trigger: GCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTCAGGGCTGCCAGCTaGTTGCCCTGTAACACTATC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVRAAS*LPCNTI
Trigger: GATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCCCTTGGGCATTCTTaGCTTGAGTCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEALGHS*LESGLP
Trigger: TGGCAGCCCTGACTCAAGCCAAGAATGCCCAAGGGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTGGAGGGTGGCTGCTaGGGCTGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVEGGC*GCGCDD
Trigger: ATCATCGCAGCCACAGCCCCAGCAGCCACCCTCCAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCACGGGCTCTCGCAATaGCCTCTGCTACAATCCGAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHGLSQ*PLLQSD
Trigger: ATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCACGGGCTCTCGCAATaGCCTCTGCTACAATCCGAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEHGLSQ*PLLQSD
Trigger: ATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPLAER*ATRPHL
Trigger: TAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTPLAER*ATRPHL
Trigger: TAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTCGCCTTCCTCCTCTaGCCGAACGCTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLAFLL*PNAGQL
Trigger: GAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGGCTGAACGAACCATaGCCTGCAGGTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRLNEP*PAGESH
Trigger: ATGACTTTCACCTGCAGGCCATGGTTCGTTCAGCCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCGGCTGAACGAACCATaGCCTGCAGGTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVRLNEP*PAGESH
Trigger: ATGACTTTCACCTGCAGGCCATGGTTCGTTCAGCCG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATGTCTGCGGGAGCGTaGCCGCTCATCATCCTCACT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEMSAGA*PLIILT
Trigger: AGTGAGGATGATGAGCGGCCACGCTCCCGCAGACAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCCTTTGGGGGACCTTaGAGTGGTTTATATTCAGGA +
Preference number: 4 (lower is better)
Translates to: RAEPGGQNKWPGCWVTWASFGGP*SGLYSG
Trigger: TCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGA...AGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCACCCTCATCATCTTaGTCCTTTGGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSPSSS*SFGGPW
Trigger: CCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGCTGTTGGGTCACCTaGGCTTCATCTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGCWVT*ASSPSI
Trigger: GATTGATGGAGATGAAGCCCAGGTGACCCAACAGCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGCTGTTGGGTCACCTaGGCTTCATCTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGCWVT*ASSPSI
Trigger: GATTGATGGAGATGAAGCCCAGGTGACCCAACAGCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVKWPGC*VTWASS
Trigger: AGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGKWPGC*VTWASS
Trigger: AGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTGGQNK*PGCWVT
Trigger: GGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRKRSQ*NCMVSG
Trigger: CCCTGACACCATGCAGTTCCATTGGGATCGCTTCCG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRKRSQ*NCMVSG
Trigger: CCCTGACACCATGCAGTTCCATTGGGATCGCTTCCG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCAGGCTCCCACCATTTaGGCAATTCAGGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREQAPTI*AIQDQE
Trigger: CTCCTGGTCCTGAATTGCCCAAATGGTGGGAGCCTG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCAGGCTCCCACCATTTaGGCAATTCAGGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLQAPTI*AIQDQE
Trigger: CTCCTGGTCCTGAATTGCCCAAATGGTGGGAGCCTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATGTTGCAGTCTGTTTaGCTCACCCCATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLMLQSV*LTPWRA
Trigger: AGCCCGCCATGGGGTGAGCCAAACAGACTGCAACAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATGTTGCAGTCTGTTTaGCTCACCCCATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEMLQSV*LTPWRA
Trigger: AGCCCGCCATGGGGTGAGCCAAACAGACTGCAACAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGTGAGGTATACTGCTaGTGCAGCAGTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGREVYC*CSSGVE
Trigger: CTCTACTCCACTGCTGCACCAGCAGTATACCTCACG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCGTGAGGTATACTGCTaGTGCAGCAGTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVREVYC*CSSGVE
Trigger: CTCTACTCCACTGCTGCACCAGCAGTATACCTCACG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCATCTCATAGTCTTGTaGGGTTGGTCGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTHLIVL*GWSAPG
Trigger: GCCAGGAGCCGACCAACCCCACAAGACTATGAGATG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCATCTCATAGTCTTGTaGGGTTGGTCGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHLIVL*GWSAPG
Trigger: GCCAGGAGCCGACCAACCCCACAAGACTATGAGATG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCATCTCATAGTCTTGTaGGGTTGGTCGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREHLIVL*GWSAPG
Trigger: GCCAGGAGCCGACCAACCCCACAAGACTATGAGATG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTCCAGTTTGACTGGTaGAACACTCCGGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLQFDW*NTPGNQ
Trigger: CTGGTTTCCCGGAGTGTTCCACCAGTCAAACTGGAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCACTCTCATCAGTGCTaGAGCTGGAGCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHSHQC*SWSWMR
Trigger: CCTCATCCAGCTCCAGCTCCAGCACTGATGAGAGTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCACTCTCATCAGTGCTaGAGCTGGAGCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTHSHQC*SWSWMR
Trigger: CCTCATCCAGCTCCAGCTCCAGCACTGATGAGAGTG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCAGGACACGATCCTTaGGCCACTCAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSGHDP*ATQRLF
Trigger: AAAGAGCCTCTGAGTGGCCCAAGGATCGTGTCCTGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCTGAGAGTACAGCCTaGCAGACGAGGTCAATACGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPESTA*QTRSIR
Trigger: CCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTGAGAGTACAGCCTaGCAGACGAGGTCAATACGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPESTA*QTRSIR
Trigger: CCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTGTTACCATTTCCTaGCTCCTACGGCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPVTIS*LLRLEG
Trigger: GCCTTCTAGCCGTAGGAGCCAGGAAATGGTAACAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCGTGGTGTGGGGACTaGAGAGTCACCATATTCTCC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSWCGD*RVTIFS
Trigger: GGAGAATATGGTGACTCTCCAGTCCCCACACCACGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGCACTACTACTTCGTaGTGTGGGGACTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCTTTS*CGDWRV
Trigger: GACTCTCCAGTCCCCACACCACGAAGTAGTAGTGCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCGAAGTTTGGTGAACTaGGCTGCCGCTGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERSLVN*AAAVLT
Trigger: AGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCGAAGTTTGGTGAACTaGGCTGCCGCTGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRSLVN*AAAVLT
Trigger: AGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGGTGCAATAGGCCCTaGCAAAACCCGGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVWCNRP*QNPVEH
Trigger: GTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGTGCAATAGGCCCTaGCAAAACCCGGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWCNRP*QNPVEH
Trigger: GTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLLAAL*CNRPWQ
Trigger: TTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLLAAL*CNRPWQ
Trigger: TTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCATCTTAGAAAGGTCTaGTCGCATCCTACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMHLRKV*SHPTGP
Trigger: CGGGCCCGTAGGATGCGACCAGACCTTTCTAAGATG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCATCTTAGAAAGGTCTaGTCGCATCCTACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHLRKV*SHPTGP
Trigger: CGGGCCCGTAGGATGCGACCAGACCTTTCTAAGATG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCATCTTAGAAAGGTCTaGTCGCATCCTACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREHLRKV*SHPTGP
Trigger: CGGGCCCGTAGGATGCGACCAGACCTTTCTAAGATG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAGGGGCTCTCAAGCCTaGATGGTGATGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERGSQA*MVMVVM
Trigger: CATCACCACCATCACCATCCAGGCTTGAGAGCCCCT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGGGGCTCTCAAGCCTaGATGGTGATGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRGSQA*MVMVVM
Trigger: CATCACCACCATCACCATCCAGGCTTGAGAGCCCCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAGGGGCTCTCAAGCCTaGATGGTGATGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMERGSQA*MVMVVM
Trigger: CATCACCACCATCACCATCCAGGCTTGAGAGCCCCT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCAGGTTGCAGTGGTaGCAACCGCAAGGTAGTACC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLRLQW*QPQGST
Trigger: GGTACTACCTTGCGGTTGCCACCACTGCAACCTGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTCCTCAGGTTGCAGTaGTGGCAACCGCAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLLRLQ*WQPQGS
Trigger: ACTACCTTGCGGTTGCCACCACTGCAACCTGAGGAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCCTCAGGTTGCAGTaGTGGCAACCGCAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLLRLQ*WQPQGS
Trigger: ACTACCTTGCGGTTGCCACCACTGCAACCTGAGGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCAATGGGGCCCATGCTaGGGCTTCAGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMQWGPC*GFSHQH
Trigger: ATGCTGATGACTGAAGCCCCAGCATGGGCCCCATTG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCAATGGGGCCCATGCTaGGGCTTCAGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLQWGPC*GFSHQH
Trigger: ATGCTGATGACTGAAGCCCCAGCATGGGCCCCATTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCAATGGGGCCCATGCTaGGGCTTCAGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEQWGPC*GFSHQH
Trigger: ATGCTGATGACTGAAGCCCCAGCATGGGCCCCATTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTCCTTTTCACCTCCTaGAGTCCTGGACTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFLFTS*SPGLPH
Trigger: GTGGGGAAGTCCAGGACTCCAGGAGGTGAAAAGGAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTCCTTTTCACCTCCTaGAGTCCTGGACTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVFLFTS*SPGLPH
Trigger: GTGGGGAAGTCCAGGACTCCAGGAGGTGAAAAGGAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGCTGTTTCCTCTGGTaGAGGGACCAGTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSCFLW*RDQFTC
Trigger: GCAAGTGAACTGGTCCCTCCACCAGAGGAAACAGCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGCTGTTTCCTCTaGTGGAGGGACCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGSCFL*WRDQFT
Trigger: AGTGAACTGGTCCCTCCACCAGAGGAAACAGCTCCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTGGCTGCTCCTGGCTaGCAGGCTGAGTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLAAPG*QAEWYN
Trigger: ATTATACCACTCAGCCTGCCAGCCAGGAGCAGCCAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGTTCCCAGGGACCTTaGCGGCCAACACTGTATTAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGSQGP*RPTLYY
Trigger: GTAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGACCAGCTGCTTTACTaGTCGGCTGGGCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDQLLY*SAGLDN
Trigger: ATTGTCCAGCCCAGCCGACCAGTAAAGCAGCTGGTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGGGCATTCTTGGCTTaGGTCAGGGCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTWAFLA*VRAASW
Trigger: CCAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCTGGTCCCATTATCTaGGCCTGCTGTACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPGPII*ACCTED
Trigger: GTCCTCTGTACAGCAGGCTCAGATAATGGGACCAGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTCATCTTCTCGAGGTaGCTGTGCAGGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFIFSR*LCRHDF
Trigger: GAAGTCATGCCTGCACAGTCACCTCGAGAAGATGAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGACGATTCACCCTTTTaGGTTCTGGGTGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVDDSPF*VLGALT
Trigger: AGTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGACAGTGGGGCAATaGCCAAGAAGGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWTVGQ*PRRDHG
Trigger: TCCATGGTCCCTTCTTGGTCATTGCCCCACTGTCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGATGAGGCGTCCCCGTaGATCTTTGCAGTACATTTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDEASP*IFAVHF
Trigger: GAAATGTACTGCAAAGATTCACGGGGACGCCTCATC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCAATGGTGTTCCTGTaGGTAGCACCTTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVAMVFL*VAPCVP
Trigger: TGGAACACAAGGTGCTACTCACAGGAACACCATTGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCAATGGTGTTCCTGTaGGTAGCACCTTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAMVFL*VAPCVP
Trigger: TGGAACACAAGGTGCTACTCACAGGAACACCATTGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTAGGCATGTTGGTATaGCCTGCCCCTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLGMLV*PAPLER
Trigger: CCTTTCCAAAGGGGCAGGTCATACCAACATGCCTAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAAGACAAAGCGGTCTaGGTCAGGCTTGCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEDKAV*VRLAEA
Trigger: CGCTTCAGCAAGCCTGACTCAGACCGCTTTGTCTTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGACCACTCATGGATTaGAGCACAGCCTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRPLMD*STALSN
Trigger: GTTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVGTSS*STTGNH
Trigger: ATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAACGGTAGAGAGTCCGTaGGGCTCTCTCCTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNETVESP*GSLLSD
Trigger: ATCACTGAGGAGAGAGCCTCACGGACTCTCTACCGT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGCTGTCTCCTCGGGTaGCTTTTCAACAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSCLLG*LFNRSI
Trigger: GATGCTCCTGTTGAAAAGTCACCCGAGGAGACAGCT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRSTSR*LGSSMH
Trigger: GTGCATGGAAGAGCCTAATCACCTTGATGTGGACCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGGCAAAACCCGGTTaGACACCGTTTCAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLAKPG*TPFQCD
Trigger: ATCACACTGAAACGGTGTTCAACCGGGTTTTGCCAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGAAGTGGCACTGCTGTaGCCCAAAGATGACACAGAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLEVALL*PKDDTD
Trigger: GTCTGTGTCATCTTTGGGTCACAGCAGTGCCACTTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAAGTGGCACTGCTGTaGCCCAAAGATGACACAGAC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMEVALL*PKDDTD
Trigger: GTCTGTGTCATCTTTGGGTCACAGCAGTGCCACTTC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGAAGGTAACAGTTCCTaGCCCTCCAGCTGTATCCAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEEGNSS*PSSCIH
Trigger: GTGGATACAGCTGGAGGGTCAGGAACTGTTACCTTC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGAAGGTAACAGTTCCTaGCCCTCCAGCTGTATCCAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTEGNSS*PSSCIH
Trigger: GTGGATACAGCTGGAGGGTCAGGAACTGTTACCTTC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCATCCTGGTTCATCTaGTCCAAGGAGTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPSWFI*SKESRE
Trigger: CTCTCTGGACTCCTTGGATCAGATGAACCAGGATGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCATCTTAGGGGCTGACTaGGGTGGCTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTILGAD*GGCPPA
Trigger: TGCTGGAGGGCAGCCACCTCAGTCAGCCCCTAAGAT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTGATACCTTGGGCCTaGATTTGTGCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVIPWA*ICATWA
Trigger: TGCCCATGTGGCACAAATTCAGGCCCAAGGTATCAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCTGAGCTGTGCTGGTaGTACCTTGGGCCTGAATTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLAELCW*YLGPEF
Trigger: AAATTCAGGCCCAAGGTATCACCAGCACAGCTCAGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGCTGAGCTGTGCTGGTaGTACCTTGGGCCTGAATTT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMAELCW*YLGPEF
Trigger: AAATTCAGGCCCAAGGTATCACCAGCACAGCTCAGC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGCTGGACAATGCGCTaGACAGCAGCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGWTMR*TAAWFP
Trigger: TGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCCCTAGCACAACATaGCGATGTCCTTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELPSTT*RCPWGP
Trigger: AGGTCCCCAAGGACATCGGCATGTTGTGCTAGGGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGTGGCTGCTGCACCTaGAGCTGGATAGTTACTACC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRECGCCT*SWIVTT
Trigger: GGTAGTAACTATCCAGCTGCAGGTGCAGCAGCCACA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTGGCTGCTGCACCTaGAGCTGGATAGTTACTACC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCGCCT*SWIVTT
Trigger: GGTAGTAACTATCCAGCTGCAGGTGCAGCAGCCACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTTTGCTGTGGCTGCTaGACCTGCAGCTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVFCCGC*TCSWIV
Trigger: AACTATCCAGCTGCAGGTGCAGCAGCCACAGCAAAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTTRGMF*SPRARA
Trigger: AGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAGCACTCTTCTTCCTaGGTTTCTTCTCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQHSSS*VSSRLP
Trigger: AGGAAGGCGAGAAGAAACGCAGGAAGAAGAGTGCTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCAGCACTCTTCTTCCTaGGTTTCTTCTCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVQHSSS*VSSRLP
Trigger: AGGAAGGCGAGAAGAAACGCAGGAAGAAGAGTGCTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCGCCATCTGGTTCTTaGACTGGTTCAGGGAGGATA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSPSGS*TGSGRI
Trigger: TATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTCCAGGCACTTGCCTaGGGACGATTCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFQALA*GRFTLL
Trigger: CAAAAGGGTGAATCGTCCGCAGGCAAGTGCCTGGAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCCAGGCACTTGCCTaGGGACGATTCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFQALA*GRFTLL
Trigger: CAAAAGGGTGAATCGTCCGCAGGCAAGTGCCTGGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTCCAGGCACTTGCCTaGGGACGATTCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFQALA*GRFTLL
Trigger: CAAAAGGGTGAATCGTCCGCAGGCAAGTGCCTGGAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTTCTTCCAGGCACTTaGCTGCGGACGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFLPGT*LRTIHP
Trigger: AGGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTTCTTCCAGGCACTTaGCTGCGGACGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFLPGT*LRTIHP
Trigger: AGGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTTCTTCCAGGCACTTaGCTGCGGACGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREFLPGT*LRTIHP
Trigger: AGGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGTTGAATCATCTGCCTaGTGGCCAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMVESSA*WPDCHG
Trigger: ACCATGGCAGTCTGGCCAGCAGGCAGATGATTCAAC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTTGAATCATCTGCCTaGTGGCCAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVESSA*WPDCHG
Trigger: ACCATGGCAGTCTGGCCAGCAGGCAGATGATTCAAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTTGAATCATCTGCCTaGTGGCCAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEVESSA*WPDCHG
Trigger: ACCATGGCAGTCTGGCCAGCAGGCAGATGATTCAAC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAATTCGATGACATCGTaGCTGGGCCTGCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVNSMTS*LGLQVI
Trigger: AATGACCTGCAGGCCCAGGCACGATGTCATCGAATT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCCGAAAGCAGTCAGTaGGCCCATAGGCATGATGAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPESSQ*AHRHDD
Trigger: GTCATCATGCCTATGGGCGCACTGACTGCTTTCGGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCGGTCCCCACGTTCTaGAGCCTCTATCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPVPTF*SLYLHL
Trigger: CAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCGGTCCCCACGTTCTaGAGCCTCTATCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPVPTF*SLYLHL
Trigger: CAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCGGTCCCCACGTTCTaGAGCCTCTATCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPVPTF*SLYLHL
Trigger: CAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTAGTCGAGCAAAAGTaGGGAAGCGATCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLVEQK*GSDPNG
Trigger: TCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTAGTCGAGCAAAAGTaGGGAAGCGATCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLVEQK*GSDPNG
Trigger: TCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAGGAGGCTGACACAATaGCAGCCGATCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVRRLTQ*QPIFQK
Trigger: CTTTTGGAAGATCGGCTGGCATTGTGTCAGCCTCCT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGAAGCTCCCCATCATaGCGAACAGGCTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERSSPS*RTGSHH
Trigger: ATGGTGGGAGCCTGTTCGGCATGATGGGGAGCTTCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCAAGGATGGAGCTGGTaGTCCTGCTTGATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLQGWSW*SCLMVL
Trigger: CAGAACCATCAAGCAGGAGCACCAGCTCCATCCTTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCAAGGATGGAGCTGGTaGTCCTGCTTGATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMQGWSW*SCLMVL
Trigger: CAGAACCATCAAGCAGGAGCACCAGCTCCATCCTTG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTEVYCW*SSGVEQ
Trigger: CTGCTCTACTCCACTGCTGCACCAGCAGTATACCTC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLEVYCW*SSGVEQ
Trigger: CTGCTCTACTCCACTGCTGCACCAGCAGTATACCTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREEVYCW*SSGVEQ
Trigger: CTGCTCTACTCCACTGCTGCACCAGCAGTATACCTC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTGCGTGAGGTATACTaGTGGTGCAGCAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVREVY*WCSSGV
Trigger: TACTCCACTGCTGCACCAGCAGTATACCTCACGCAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGTGCGTGAGGTATACTaGTGGTGCAGCAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMVREVY*WCSSGV
Trigger: TACTCCACTGCTGCACCAGCAGTATACCTCACGCAC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCAGTGGTGAGGCAGTaGGTGAGGTATACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEAVVRQ*VRYTAG
Trigger: ACCAGCAGTATACCTCACGCACTGCCTCACCACTGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGGCCACCACCTCGTaGTCTAGCTTTAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLATTS*SSFKVR
Trigger: TCTGACTTTAAAGCTAGAGCACGAGGTGGTGGCCAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCTCACTCTCATCAGTaGTGGAGCTGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPHSHQ*WSWSWM
Trigger: CATCCAGCTCCAGCTCCAGCACTGATGAGAGTGAGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTCTAGCAAGTGGTTaGCTGGCCCCAAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCLASG*LAPKFL
Trigger: GAGGAATTTTGGGGCCAGGCAACCACTTGCTAGACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLCHGS*TTTSWC
Trigger: ACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCADCR*FLLCHG
Trigger: TCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRECADCR*FLLCHG
Trigger: TCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMCADCR*FLLCHG
Trigger: TCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFGELG*RCADCR
Trigger: TCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTTGCTGCTCTCTGGTaGAATAGGCCCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELAALW*NRPWQN
Trigger: GTTTTGCCAGGGCCTATTGCACCAGAGAGCAGCAAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTGCTGCTCTCTGGTaGAATAGGCCCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLAALW*NRPWQN
Trigger: GTTTTGCCAGGGCCTATTGCACCAGAGAGCAGCAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCAGTGCTTCCACCCTaGATGAGGGCCATCATCTTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPVLPP*MRAIIL
Trigger: TAAGATGATGGCCCTCATGCAGGGTGGAAGCACTGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCAGTGCTTCCACCCTaGATGAGGGCCATCATCTTA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPVLPP*MRAIIL
Trigger: TAAGATGATGGCCCTCATGCAGGGTGGAAGCACTGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGGTGATGAAGCATGGTaGTGGAGTCTACATGAGGGG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTGDEAW*WSLHEG
Trigger: CCCCTCATGTAGACTCCAGCACCATGCTTCATCACC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGTGATGAAGCATGGTaGTGGAGTCTACATGAGGGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGDEAW*WSLHEG
Trigger: CCCCTCATGTAGACTCCAGCACCATGCTTCATCACC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAAGCAATGGGGCCCATaGTGGGGCTTCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEKQWGP*WGFSHQ
Trigger: CTGATGACTGAAGCCCCAGCATGGGCCCCATTGCTT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTCCACCATTGGCTGTaGCTGCCACCAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTFHHWL*LPPGAE
Trigger: CTCAGCCCCTGGTGGCAGGCACAGCCAATGGTGGAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGCTGGGCTGGACAATaGGCTGAACAGCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGWAGQ*AEQQPG
Trigger: ACCAGGCTGCTGTTCAGCGCATTGTCCAGCCCAGCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTCTTCAGAGGAAGATaGTGGAACTCCTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVFRGR*WNSCSG
Trigger: GCCACTGCAGGAGTTCCACCATCTTCCTCTGAAGAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430710.8
ENST00000557364.6
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTCAGGGCTGCCAGCTaGTTGCCCTGTAACACTATC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVRAAS*LPCNTI
Trigger: GATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACACGGGCTCTCGCAATaGCCTCTGCTACAATCCGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEHGLSQ*PLLQSD
Trigger: ATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPLAER*ATRPHL
Trigger: TAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIWFLH*FREDRL
Trigger: GAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCAAAGTCTCGCCATCTaGTTCTTGCACTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVQSLAI*FLHWFR
Trigger: CCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCGGCTGAACGAACCATaGCCTGCAGGTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERLNEP*PAGESH
Trigger: ATGACTTTCACCTGCAGGCCATGGTTCGTTCAGCCG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCGGCTGAACGAACCATaGCCTGCAGGTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRLNEP*PAGESH
Trigger: ATGACTTTCACCTGCAGGCCATGGTTCGTTCAGCCG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAATGGCCCGACAAATaGTCTCCACATCTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEWPDK*SPHLVQ
Trigger: CTGAACGAGATGTGGAGACCATTTGTCGGGCCATTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGACAGTACACGAGAATaGCCCGACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDSTRE*PDKWSP
Trigger: TGGAGACCATTTGTCGGGCCATTCTCGTGTACTGTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGACAGTACACGAGAATaGCCCGACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVDSTRE*PDKWSP
Trigger: TGGAGACCATTTGTCGGGCCATTCTCGTGTACTGTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCACCCTCATCATCTTaGTCCTTTGGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSPSSS*SFGGPW
Trigger: CCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCACCCTCATCATCTTaGTCCTTTGGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSPSSS*SFGGPW
Trigger: CCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCACCCTCATCATCTTaGTCCTTTGGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSPSSS*SFGGPW
Trigger: CCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGCTGTTGGGTCACCTaGGCTTCATCTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGCWVT*ASSPSI
Trigger: GATTGATGGAGATGAAGCCCAGGTGACCCAACAGCC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGCTGTTGGGTCACCTaGGCTTCATCTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGCWVT*ASSPSI
Trigger: GATTGATGGAGATGAAGCCCAGGTGACCCAACAGCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGGCTGTTGGGTCACCTaGGCTTCATCTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREGCWVT*ASSPSI
Trigger: GATTGATGGAGATGAAGCCCAGGTGACCCAACAGCC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLKWPGC*VTWASS
Trigger: AGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTKWPGC*VTWASS
Trigger: AGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGGQNK*PGCWVT
Trigger: GGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERKRSQ*NCMVSG
Trigger: CCCTGACACCATGCAGTTCCATTGGGATCGCTTCCG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATACTTGGCGGCACATaGCCACAAAGCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGILGGT*PQSHGS
Trigger: ACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATGTTGCAGTCTGTTTaGCTCACCCCATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEMLQSV*LTPWRA
Trigger: AGCCCGCCATGGGGTGAGCCAAACAGACTGCAACAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCGTGAGGTATACTGCTaGTGCAGCAGTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTREVYC*CSSGVE
Trigger: CTCTACTCCACTGCTGCACCAGCAGTATACCTCACG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCCAGTTTGACTGGTaGAACACTCCGGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLQFDW*NTPGNQ
Trigger: CTGGTTTCCCGGAGTGTTCCACCAGTCAAACTGGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCAGGACACGATCCTTaGGCCACTCAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSGHDP*ATQRLF
Trigger: AAAGAGCCTCTGAGTGGCCCAAGGATCGTGTCCTGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCTGAGAGTACAGCCTaGCAGACGAGGTCAATACGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPESTA*QTRSIR
Trigger: CCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTGTTACCATTTCCTaGCTCCTACGGCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPVTIS*LLRLEG
Trigger: GCCTTCTAGCCGTAGGAGCCAGGAAATGGTAACAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCCTGTTACCATTTCCTaGCTCCTACGGCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTPVTIS*LLRLEG
Trigger: GCCTTCTAGCCGTAGGAGCCAGGAAATGGTAACAGG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGACTGTCTAGCAAGTaGTTGCCTGGCCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGLSSK*LPGPKI
Trigger: AATTTTGGGGCCAGGCAACCACTTGCTAGACAGTCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCGTGGTGTGGGGACTaGAGAGTCACCATATTCTCC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSWCGD*RVTIFS
Trigger: GGAGAATATGGTGACTCTCCAGTCCCCACACCACGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCGTGGTGTGGGGACTaGAGAGTCACCATATTCTCC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSWCGD*RVTIFS
Trigger: GGAGAATATGGTGACTCTCCAGTCCCCACACCACGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTCGTGGTGTGGGGACTaGAGAGTCACCATATTCTCC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESWCGD*RVTIFS
Trigger: GGAGAATATGGTGACTCTCCAGTCCCCACACCACGA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTACTACTTCGTGGTGTaGGGACTGGAGAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGYYFVV*GLESHH
Trigger: ATGGTGACTCTCCAGTCCCCACACCACGAAGTAGTA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGCACTACTACTTCGTaGTGTGGGGACTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRECTTTS*CGDWRV
Trigger: GACTCTCCAGTCCCCACACCACGAAGTAGTAGTGCA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTTCCTCCTCTGCCATaGAAGCTGCACTACTACTTC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLPPLP*KLHYYF
Trigger: GAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTCCTCCTCTGCCATaGAAGCTGCACTACTACTTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLPPLP*KLHYYF
Trigger: GAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGAAGTTTGGTGAACTaGGCTGCCGCTGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERSLVN*AAAVLT
Trigger: AGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGTGCAATAGGCCCTaGCAAAACCCGGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWCNRP*QNPVEH
Trigger: GTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTGGTGCAATAGGCCCTaGCAAAACCCGGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTWCNRP*QNPVEH
Trigger: GTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLLAAL*CNRPWQ
Trigger: TTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELLAAL*CNRPWQ
Trigger: TTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLLAAL*CNRPWQ
Trigger: TTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCAAAGATGCAGAAGTaGCACTGCTGTGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAKMQK*HCCDPK
Trigger: CTTTGGGTCACAGCAGTGCCACTTCTGCATCTTTGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGATGAAGCATGGTGCTaGAGTCTACATGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDEAWC*SLHEGM
Trigger: CATCCCCTCATGTAGACTCCAGCACCATGCTTCATC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGATGAAGCATGGTGCTaGAGTCTACATGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVDEAWC*SLHEGM
Trigger: CATCCCCTCATGTAGACTCCAGCACCATGCTTCATC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGTGGTGATGAAGCATaGTGCTGGAGTCTACATGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGGDEA*CWSLHE
Trigger: CTCATGTAGACTCCAGCACCATGCTTCATCACCACC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGGGGCTCTCAAGCCTaGATGGTGATGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERGSQA*MVMVVM
Trigger: CATCACCACCATCACCATCCAGGCTTGAGAGCCCCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCAGGTTGCAGTGGTaGCAACCGCAAGGTAGTACC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELRLQW*QPQGST
Trigger: GGTACTACCTTGCGGTTGCCACCACTGCAACCTGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCATTTCAGAGGAAGATGGTaGAACTCCTGCTCATACTGC +
Preference number: 4 (lower is better)
Translates to: QSPEARINGLAVGSPGLHFRGRW*NSCSYC
Trigger: GCAGTATGAGCAGGAGTTCCACCATCTTCCTCTGAA...ATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGCTGTTTCCTCTGGTaGAGGGACCAGTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSCFLW*RDQFTC
Trigger: GCAAGTGAACTGGTCCCTCCACCAGAGGAAACAGCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAGCTGTTTCCTCTGGTaGAGGGACCAGTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESCFLW*RDQFTC
Trigger: GCAAGTGAACTGGTCCCTCCACCAGAGGAAACAGCT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGCTCAGGATCTCCTaGCTCTTGGAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWLRIS*LLETCK
Trigger: TTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATGAAAGGATTCCCTTaGCTCAGGATCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGMKGFP*LRISWL
Trigger: GAGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATGAAAGGATTCCCTTaGCTCAGGATCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVMKGFP*LRISWL
Trigger: GAGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCCCTCCAGCACTACTaGAGGAGACAGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTALQHY*RRQLWQ
Trigger: CTGCCACAGCTGTCTCCTCCAGTAGTGCTGGAGGGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGGGTCTGCCATCTTaGGAAAGTAATGGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWGLPS*ESNGGY
Trigger: GTACCCTCCATTACTTTCCCAAGATGGCAGACCCCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGTTCCCAGGGACCTTaGCGGCCAACACTGTATTAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGSQGP*RPTLYY
Trigger: GTAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGACCAGCTGCTTTACTaGTCGGCTGGGCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEDQLLY*SAGLDN
Trigger: ATTGTCCAGCCCAGCCGACCAGTAAAGCAGCTGGTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAACCCTTAACTGGCTaGAGGACCAGCTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEPLTG*RTSCFT
Trigger: AGTAAAGCAGCTGGTCCTCCAGCCAGTTAAGGGTTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGAACCCTTAACTGGCTaGAGGACCAGCTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVEPLTG*RTSCFT
Trigger: AGTAAAGCAGCTGGTCCTCCAGCCAGTTAAGGGTTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTCCTGTGCAAGTCCTaGTACTTCCTTTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELLCKS*YFLSRQ
Trigger: CTGCCTGGAAAGGAAGTACCAGGACTTGCACAGGAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTCCTGTGCAAGTCCTaGTACTTCCTTTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLLCKS*YFLSRQ
Trigger: CTGCCTGGAAAGGAAGTACCAGGACTTGCACAGGAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCTGGAGGACCAGGGTaGTGCGTTTCGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTAGGPG*CVSIHP
Trigger: AGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCTGCAGTACCACCTTaGCTGGTACTGAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAAVPP*LVLKVF
Trigger: AAAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCTGCAGTACCACCTTaGCTGGTACTGAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVAAVPP*LVLKVF
Trigger: AAAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTCATCTTCTCGAGGTaGCTGTGCAGGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFIFSR*LCRHDF
Trigger: GAAGTCATGCCTGCACAGTCACCTCGAGAAGATGAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCATCTTCTCGAGGTaGCTGTGCAGGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFIFSR*LCRHDF
Trigger: GAAGTCATGCCTGCACAGTCACCTCGAGAAGATGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTCATCTTCTCGAGGTaGCTGTGCAGGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFIFSR*LCRHDF
Trigger: GAAGTCATGCCTGCACAGTCACCTCGAGAAGATGAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTTAACTTGGCGGTTTaGGCGTCTCTTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLNLAV*ASLLNA
Trigger: AGCATTCAGAAGAGACGCTCAAACCGCCAAGTTAAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGACGATTCACCCTTTTaGGTTCTGGGTGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDDSPF*VLGALT
Trigger: AGTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGACGATTCACCCTTTTaGGTTCTGGGTGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREDDSPF*VLGALT
Trigger: AGTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGATGAGGCGTCCCCGTaGATCTTTGCAGTACATTTC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDEASP*IFAVHF
Trigger: GAAATGTACTGCAAAGATTCACGGGGACGCCTCATC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGATGAGGCGTCCCCGTaGATCTTTGCAGTACATTTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDEASP*IFAVHF
Trigger: GAAATGTACTGCAAAGATTCACGGGGACGCCTCATC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGTATGCGCCTGGGATaGGGCGTCCCCGTGAATCTT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTCMRLG*GVPVNL
Trigger: AAGATTCACGGGGACGCCTCATCCCAGGCGCATACA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGCAATGGTGTTCCTGTaGGTAGCACCTTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEAMVFL*VAPCVP
Trigger: TGGAACACAAGGTGCTACTCACAGGAACACCATTGC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATGGCCTGTAGCTTTTaGACCTGTTCCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGMACSF*TCSSVL
Trigger: CAAGACAGAGGAACAGGTTCAAAAGCTACAGGCCAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATGGCCTGTAGCTTTTaGACCTGTTCCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVMACSF*TCSSVL
Trigger: CAAGACAGAGGAACAGGTTCAAAAGCTACAGGCCAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTTAGGCATGTTGGTATaGCCTGCCCCTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLGMLV*PAPLER
Trigger: CCTTTCCAAAGGGGCAGGTCATACCAACATGCCTAA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTAGGCATGTTGGTATaGCCTGCCCCTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELGMLV*PAPLER
Trigger: CCTTTCCAAAGGGGCAGGTCATACCAACATGCCTAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCGACCACTCATGGATTaGAGCACAGCCTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMERPLMD*STALSN
Trigger: GTTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCGACCACTCATGGATTaGAGCACAGCCTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRPLMD*STALSN
Trigger: GTTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCGACCACTCATGGATTaGAGCACAGCCTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERPLMD*STALSN
Trigger: GTTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCATCATCTTCCTCCATaGTGGCTGCATATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHHLPP*WLHMLL
Trigger: AAGGAGCATATGCAGCCATCATGGAGGAAGATGATG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREVGTSS*STTGNH
Trigger: ATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAAC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVGTSS*STTGNH
Trigger: ATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEVGTSS*STTGNH
Trigger: ATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAAC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAATTTCTTTCAGCTTaGAGGCTGCTTCACAACGCC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQFLSA*RLLHNA
Trigger: GGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCAATTTCTTTCAGCTTaGAGGCTGCTTCACAACGCC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVQFLSA*RLLHNA
Trigger: GGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRSTSR*LGSSMH
Trigger: GTGCATGGAAGAGCCTAATCACCTTGATGTGGACCT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRSTSR*LGSSMH
Trigger: GTGCATGGAAGAGCCTAATCACCTTGATGTGGACCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMERSTSR*LGSSMH
Trigger: GTGCATGGAAGAGCCTAATCACCTTGATGTGGACCT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACAGCAAACTCTGGATaGCCCTGTAACCACATCTCC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTANSG*PCNHIS
Trigger: GGAGATGTGGTTACAGGGTCATCCAGAGTTTGCTGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTGGCAAAACCCGGTTaGACACCGTTTCAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLAKPG*TPFQCD
Trigger: ATCACACTGAAACGGTGTTCAACCGGGTTTTGCCAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAAGTGGCACTGCTGTaGCCCAAAGATGACACAGAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEVALL*PKDDTD
Trigger: GTCTGTGTCATCTTTGGGTCACAGCAGTGCCACTTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATCTTCACTGGAGTCTaGGTTAGCTGGCATCATAGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVIFTGV*VSWHHR
Trigger: CCTATGATGCCAGCTAACTCAGACTCCAGTGAAGAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCTTCACTGGAGTCTaGGTTAGCTGGCATCATAGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIFTGV*VSWHHR
Trigger: CCTATGATGCCAGCTAACTCAGACTCCAGTGAAGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAAGGGCCAGAGTAAATaGAAATACAGCAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTKGQSK*KYSSRP
Trigger: TGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCTT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAAGGGCCAGAGTAAATaGAAATACAGCAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMKGQSK*KYSSRP
Trigger: TGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCTT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAAGGTAACAGTTCCTaGCCCTCCAGCTGTATCCAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEGNSS*PSSCIH
Trigger: GTGGATACAGCTGGAGGGTCAGGAACTGTTACCTTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCATCCTGGTTCATCTaGTCCAAGGAGTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPSWFI*SKESRE
Trigger: CTCTCTGGACTCCTTGGATCAGATGAACCAGGATGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGACTTGCAAAAGTCCTaGTGTTGGCGTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDLQKS*CWRRCL
Trigger: CAGACATCGACGCCAACATCAGGACTTTTGCAAGTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGACTTGCAAAAGTCCTaGTGTTGGCGTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDLQKS*CWRRCL
Trigger: CAGACATCGACGCCAACATCAGGACTTTTGCAAGTC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAACAATCTTAGGGGCTaGCTGAGGTGGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTNNLRG*LRWLPS
Trigger: GGAGGGCAGCCACCTCAGTCAGCCCCTAAGATTGTT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACATCGAACAGATCCATaGTGGGGTCTGCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEHRTDP*WGLPSW
Trigger: CCAAGATGGCAGACCCCATCATGGATCTGTTCGATG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGTGGCTGCTGCACCTaGAGCTGGATAGTTACTACC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECGCCT*SWIVTT
Trigger: GGTAGTAACTATCCAGCTGCAGGTGCAGCAGCCACA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTTTGCTGTGGCTGCTaGACCTGCAGCTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFCCGC*TCSWIV
Trigger: AACTATCCAGCTGCAGGTGCAGCAGCCACAGCAAAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGAGCCAGCCTGTGGCTaGAGTACCACCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTEPACG*STTLTG
Trigger: ACCAGTCAAGGTGGTACTGCAGCCACAGGCTGGCTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTCTGGTGTTCCAATCTaGGGTTTTCCTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSGVPI*GFPPFL
Trigger: CAGGAATGGAGGAAAACCGCAGATTGGAACACCAGA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCTGGTGTTCCAATCTaGGGTTTTCCTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSGVPI*GFPPFL
Trigger: CAGGAATGGAGGAAAACCGCAGATTGGAACACCAGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCAGCACTCTTCTTCCTaGGTTTCTTCTCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREQHSSS*VSSRLP
Trigger: AGGAAGGCGAGAAGAAACGCAGGAAGAAGAGTGCTG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCGCCATCTGGTTCTTaGACTGGTTCAGGGAGGATA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSPSGS*TGSGRI
Trigger: TATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTCGCCATCTGGTTCTTaGACTGGTTCAGGGAGGATA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESPSGS*TGSGRI
Trigger: TATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTTTAGCTCCCATGTaGTATCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLLAPM*YPHRAE
Trigger: CTCTGCCCTATGAGGATAGCACATGGGAGCTAAAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTCCAGGCACTTGCCTaGGGACGATTCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFQALA*GRFTLL
Trigger: CAAAAGGGTGAATCGTCCGCAGGCAAGTGCCTGGAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTCTTCCAGGCACTTaGCTGCGGACGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFLPGT*LRTIHP
Trigger: AGGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTTGAATCATCTGCCTaGTGGCCAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVESSA*WPDCHG
Trigger: ACCATGGCAGTCTGGCCAGCAGGCAGATGATTCAAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTTCCAGGTCCATGTaGTTGAGACTATCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCSRSM*LRLSSS
Trigger: GCTGCTTGATAGTCTCAAGCACATGGACCTGGAACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAATTCGATGACATCGTaGCTGGGCCTGCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLNSMTS*LGLQVI
Trigger: AATGACCTGCAGGCCCAGGCACGATGTCATCGAATT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAATTCGATGACATCGTaGCTGGGCCTGCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMNSMTS*LGLQVI
Trigger: AATGACCTGCAGGCCCAGGCACGATGTCATCGAATT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCATATACCAGGAGATaGTTTTCCACCCGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPYTRR*FSTRKQ
Trigger: CTGCTTTCGGGTGGAAAAGCATCTCCTGGTATATGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCATATACCAGGAGATaGTTTTCCACCCGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPYTRR*FSTRKQ
Trigger: CTGCTTTCGGGTGGAAAAGCATCTCCTGGTATATGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCTTCGCCGGTCCCCACGTTCTGCAGCCTCTATCTTCATTTGTTCTCTCTTGTTTTCAGCTTGAAGGCTaGTTCACAACGCCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: AFAGPHVLQPLSSFVLSCFQLEG*FTTPPS
Trigger: CGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAA...ACAAGAGAGAACAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGGCGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTCAGCTTGAAGGCTaGTTCACAACGCCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFQLEG*FTTPPS
Trigger: CGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGATCCCAATGGAACTaGATGGTGTCAGGGTCATAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRSQWN*MVSGSY
Trigger: ATATGACCCTGACACCATGCAGTTCCATTGGGATCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTAGTCGAGCAAAAGTaGGGAAGCGATCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLVEQK*GSDPNG
Trigger: TCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTAGTCGAGCAAAAGTaGGGAAGCGATCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELVEQK*GSDPNG
Trigger: TCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTAGTCGAGCAAAAGTaGGGAAGCGATCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELVEQK*GSDPNG
Trigger: TCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAGGAGGCTGACACAATaGCAGCCGATCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRRLTQ*QPIFQK
Trigger: CTTTTGGAAGATCGGCTGGCATTGTGTCAGCCTCCT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGGAGGCTGACACAATaGCAGCCGATCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRRLTQ*QPIFQK
Trigger: CTTTTGGAAGATCGGCTGGCATTGTGTCAGCCTCCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAGAAGTCTGGGTCCTaGATGATGTTGCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEKSGS*MMLQSV
Trigger: AACAGACTGCAACATCATGCAGGACCCAGACTTCTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGAGAAGTCTGGGTCCTaGATGATGTTGCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVEKSGS*MMLQSV
Trigger: AACAGACTGCAACATCATGCAGGACCCAGACTTCTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEVYCW*SSGVEQ
Trigger: CTGCTCTACTCCACTGCTGCACCAGCAGTATACCTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTGCGTGAGGTATACTaGTGGTGCAGCAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVREVY*WCSSGV
Trigger: TACTCCACTGCTGCACCAGCAGTATACCTCACGCAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTGGCCACCACCTCGTaGTCTAGCTTTAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLATTS*SSFKVR
Trigger: TCTGACTTTAAAGCTAGAGCACGAGGTGGTGGCCAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTGGCCACCACCTCGTaGTCTAGCTTTAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELATTS*SSFKVR
Trigger: TCTGACTTTAAAGCTAGAGCACGAGGTGGTGGCCAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGCTCTTTGTCTTTCCTaGAGTAGCAGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREALCLS*SSRSSG
Trigger: CCCTGAGCTTCTGCTACTGCAGGAAAGACAAAGAGC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCTCTTTGTCTTTCCTaGAGTAGCAGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLALCLS*SSRSSG
Trigger: CCCTGAGCTTCTGCTACTGCAGGAAAGACAAAGAGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGCTCTTTGTCTTTCCTaGAGTAGCAGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEALCLS*SSRSSG
Trigger: CCCTGAGCTTCTGCTACTGCAGGAAAGACAAAGAGC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGTCTAGCAAGTGGTTaGCTGGCCCCAAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMCLASG*LAPKFL
Trigger: GAGGAATTTTGGGGCCAGGCAACCACTTGCTAGACA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTCTAGCAAGTGGTTaGCTGGCCCCAAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCLASG*LAPKFL
Trigger: GAGGAATTTTGGGGCCAGGCAACCACTTGCTAGACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELCHGS*TTTSWC
Trigger: ACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLCHGS*TTTSWC
Trigger: ACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELCHGS*TTTSWC
Trigger: ACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLCHGS*TTTSWC
Trigger: ACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTTGCTGCTCTCTGGTaGAATAGGCCCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELAALW*NRPWQN
Trigger: GTTTTGCCAGGGCCTATTGCACCAGAGAGCAGCAAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCAGTGCTTCCACCCTaGATGAGGGCCATCATCTTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPVLPP*MRAIIL
Trigger: TAAGATGATGGCCCTCATGCAGGGTGGAAGCACTGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATGCAGAAGTGGCACTaGTGTGACCCAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVMQKWH*CDPKMT
Trigger: TGTCATCTTTGGGTCACAGCAGTGCCACTTCTGCAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATGCAGAAGTGGCACTaGTGTGACCCAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGMQKWH*CDPKMT
Trigger: TGTCATCTTTGGGTCACAGCAGTGCCACTTCTGCAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGCTCTTGGAGACTTaGAAAAGTCCTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWLLET*KSPDVG
Trigger: GCCAACATCAGGACTTTTGCAAGTCTCCAAGAGCCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGAGGTCAGTGTAACTaGAGGCTTCAGTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRGQCN*RLQWGP
Trigger: GGGCCCCCACTGAAGCCTGCAGTTACACTGACCTCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTCTTCAGAGGAAGATaGTGGAACTCCTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVFRGR*WNSCSG
Trigger: GCCACTGCAGGAGTTCCACCATCTTCCTCTGAAGAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430710.8
ENST00000557364.6
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTCATGGAGCAAGATaGCTACGTCTTCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLHGAR*LRLQRK
Trigger: CTTCCTCTGAAGACGTAGCCATCTTGCTCCATGAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCACATGCCGATGTCCTTaGGGACCTCCAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTTCRCP*GPPDCG
Trigger: GCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCCCTTGGGCATTCTTaGCTTGAGTCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTALGHS*LESGLP
Trigger: TGGCAGCCCTGACTCAAGCCAAGAATGCCCAAGGGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGCTGCACCTGCAGCTaGATAGTTACTACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMCCTCS*IVTTLA
Trigger: TGCCAAGGTAGTAACTATCCAGCTGCAGGTGCAGCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGCTGCACCTGCAGCTaGATAGTTACTACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCCTCS*IVTTLA
Trigger: TGCCAAGGTAGTAACTATCCAGCTGCAGGTGCAGCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTGCTGCACCTGCAGCTaGATAGTTACTACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMECCTCS*IVTTLA
Trigger: TGCCAAGGTAGTAACTATCCAGCTGCAGGTGCAGCA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGAAGAGCCAGCCTGTaGCTGCAGTACCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGRASL*LQYHLD
Trigger: GTCAAGGTGGTACTGCAGCCACAGGCTGGCTCTTCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLIWFLH*FREDRL
Trigger: GAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREIWFLH*FREDRL
Trigger: GAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTIWFLH*FREDRL
Trigger: GAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCAAAGTCTCGCCATCTaGTTCTTGCACTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEQSLAI*FLHWFR
Trigger: CCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCACAAAGAACTGCATaGAAGGCAAAGTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPQRTA*KAKSRH
Trigger: ATGGCGAGACTTTGCCTTCCATGCAGTTCTTTGTGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCACAAAGAACTGCATaGAAGGCAAAGTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPQRTA*KAKSRH
Trigger: ATGGCGAGACTTTGCCTTCCATGCAGTTCTTTGTGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGTAATTGTGGACAGTaGGGCAATGACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSNCGQ*GNDQEG
Trigger: CCCTTCTTGGTCATTGCCCCACTGTCCACAATTACT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGGCTGAACGAACCATaGCCTGCAGGTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERLNEP*PAGESH
Trigger: ATGACTTTCACCTGCAGGCCATGGTTCGTTCAGCCG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAATGGCCCGACAAATaGTCTCCACATCTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMEWPDK*SPHLVQ
Trigger: CTGAACGAGATGTGGAGACCATTTGTCGGGCCATTC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGAATGGCCCGACAAATaGTCTCCACATCTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEEWPDK*SPHLVQ
Trigger: CTGAACGAGATGTGGAGACCATTTGTCGGGCCATTC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGACAGTACACGAGAATaGCCCGACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDSTRE*PDKWSP
Trigger: TGGAGACCATTTGTCGGGCCATTCTCGTGTACTGTC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGACAGTACACGAGAATaGCCCGACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDSTRE*PDKWSP
Trigger: TGGAGACCATTTGTCGGGCCATTCTCGTGTACTGTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIILVL*GTLEWF
Trigger: AAACCACTCCAAGGTCCCCCAAAGGACCAAGATGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVIILVL*GTLEWF
Trigger: AAACCACTCCAAGGTCCCCCAAAGGACCAAGATGAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATACTTGGCGGCACATaGCCACAAAGCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEILGGT*PQSHGS
Trigger: ACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATACTTGGCGGCACATaGCCACAAAGCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLILGGT*PQSHGS
Trigger: ACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGATACTTGGCGGCACATaGCCACAAAGCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREILGGT*PQSHGS
Trigger: ACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTAT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGATACTTGGCGGCACATaGCCACAAAGCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMILGGT*PQSHGS
Trigger: ACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTAT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGTGAGGTATACTGCTaGTGCAGCAGTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEREVYC*CSSGVE
Trigger: CTCTACTCCACTGCTGCACCAGCAGTATACCTCACG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCCAGTTTGACTGGTaGAACACTCCGGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELQFDW*NTPGNQ
Trigger: CTGGTTTCCCGGAGTGTTCCACCAGTCAAACTGGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATCCTCCAGTTTGACTaGTGGAACACTCCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEILQFD*WNTPGN
Trigger: GTTTCCCGGAGTGTTCCACCAGTCAAACTGGAGGAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGCTTTGAGCGGGACTaGTCAGTTAGCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSFERD*SVSFSS
Trigger: GGAAGAGAAGCTAACTGACCAGTCCCGCTCAAAGCT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGCTTTGAGCGGGACTaGTCAGTTAGCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSFERD*SVSFSS
Trigger: GGAAGAGAAGCTAACTGACCAGTCCCGCTCAAAGCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTTGGGAATCCATCTTaGGACATAGTGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFGNPS*DIVRDR
Trigger: CCTGTCCCTCACTATGTCCCAAGATGGATTCCCAAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCAGGACACGATCCTTaGGCCACTCAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESGHDP*ATQRLF
Trigger: AAAGAGCCTCTGAGTGGCCCAAGGATCGTGTCCTGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCTGTTACCATTTCCTaGCTCCTACGGCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPVTIS*LLRLEG
Trigger: GCCTTCTAGCCGTAGGAGCCAGGAAATGGTAACAGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGACTGTCTAGCAAGTaGTTGCCTGGCCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGLSSK*LPGPKI
Trigger: AATTTTGGGGCCAGGCAACCACTTGCTAGACAGTCC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGACTGTCTAGCAAGTaGTTGCCTGGCCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGLSSK*LPGPKI
Trigger: AATTTTGGGGCCAGGCAACCACTTGCTAGACAGTCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGACTGTCTAGCAAGTaGTTGCCTGGCCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGLSSK*LPGPKI
Trigger: AATTTTGGGGCCAGGCAACCACTTGCTAGACAGTCC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTACTACTTCGTGGTGTaGGGACTGGAGAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMYYFVV*GLESHH
Trigger: ATGGTGACTCTCCAGTCCCCACACCACGAAGTAGTA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTACTACTTCGTGGTGTaGGGACTGGAGAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEYYFVV*GLESHH
Trigger: ATGGTGACTCTCCAGTCCCCACACCACGAAGTAGTA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGCACTACTACTTCGTaGTGTGGGGACTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECTTTS*CGDWRV
Trigger: GACTCTCCAGTCCCCACACCACGAAGTAGTAGTGCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTCCTCCTCTGCCATaGAAGCTGCACTACTACTTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLPPLP*KLHYYF
Trigger: GAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTTCCTCCTCTGCCATaGAAGCTGCACTACTACTTC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELPPLP*KLHYYF
Trigger: GAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGTGCAATAGGCCCTaGCAAAACCCGGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWCNRP*QNPVEH
Trigger: GTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGCAAAGATGCAGAAGTaGCACTGCTGTGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREAKMQK*HCCDPK
Trigger: CTTTGGGTCACAGCAGTGCCACTTCTGCATCTTTGC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGCAAAGATGCAGAAGTaGCACTGCTGTGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTAKMQK*HCCDPK
Trigger: CTTTGGGTCACAGCAGTGCCACTTCTGCATCTTTGC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGATGAAGCATGGTGCTaGAGTCTACATGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDEAWC*SLHEGM
Trigger: CATCCCCTCATGTAGACTCCAGCACCATGCTTCATC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGATGAAGCATGGTGCTaGAGTCTACATGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEDEAWC*SLHEGM
Trigger: CATCCCCTCATGTAGACTCCAGCACCATGCTTCATC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGTGGTGATGAAGCATaGTGCTGGAGTCTACATGAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGGDEA*CWSLHE
Trigger: CTCATGTAGACTCCAGCACCATGCTTCATCACCACC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGTGGTGATGAAGCATaGTGCTGGAGTCTACATGAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGGDEA*CWSLHE
Trigger: CTCATGTAGACTCCAGCACCATGCTTCATCACCACC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTCTTCAGAGGAAGATaGTGGAACTCCTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVFRGR*WNSCSY
Trigger: GTATGAGCAGGAGTTCCACCATCTTCCTCTGAAGAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643469.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGAGTCCAGAGAGCTTaGCAGTCCAAGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGVQRA*QSKGFL
Trigger: GAGGAAGCCCTTGGACTGCCAAGCTCTCTGGACTCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTTGGAAAGTTCTGTaGGAGCTGTTTCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLWKVL*ELFPLV
Trigger: CACCAGAGGAAACAGCTCCCACAGAACTTTCCAAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTTTGGAAAGTTCTGTaGGAGCTGTTTCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLWKVL*ELFPLV
Trigger: CACCAGAGGAAACAGCTCCCACAGAACTTTCCAAAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAGCTGTGGATTCTTTaGAAAGTTCTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGELWIL*KVLWEL
Trigger: CAGCTCCCACAGAACTTTCCAAAGAATCCACAGCTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGAGCTGTGGATTCTTTaGAAAGTTCTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVELWIL*KVLWEL
Trigger: CAGCTCCCACAGAACTTTCCAAAGAATCCACAGCTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAAGGTTATGGATTCTaGAGCTGGAGCTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQGYGF*SWSCGF
Trigger: GAATCCACAGCTCCAGCTCCAGAATCCATAACCTTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTCTGTAAGACAGGTTaGGCTGGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVCKTG*AGCSWL
Trigger: CAGCCAGGAGCAGCCAGCCCAACCTGTCTTACAGAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGCTCAGGATCTCCTaGCTCTTGGAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWLRIS*LLETCK
Trigger: TTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTGGCTCAGGATCTCCTaGCTCTTGGAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEWLRIS*LLETCK
Trigger: TTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGGGTCTGCCATCTTaGGAAAGTAATGGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWGLPS*ESNGGY
Trigger: GTACCCTCCATTACTTTCCCAAGATGGCAGACCCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGGGGTCTGCCATCTTaGGAAAGTAATGGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMWGLPS*ESNGGY
Trigger: GTACCCTCCATTACTTTCCCAAGATGGCAGACCCCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCGTTTCGATTCACCCTaGGTAGGTGTAGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRFDSP*VGVEVS
Trigger: ACTGACCTCTACACCTACCCAGGGTGAATCGAAACG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCGTTTCGATTCACCCTaGGTAGGTGTAGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRFDSP*VGVEVS
Trigger: ACTGACCTCTACACCTACCCAGGGTGAATCGAAACG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
3UTR CAA 72 bp GCAGCGACTTGTCAGCCTCACTGTCCCACCAAGTTGTaGGAACCTCCAGTTGATCCACTACTGGGAACCATA +
Preference number: 4 (lower is better)
Translates to: AATCQPHCPTKL*EPPVDPLLGTI
Trigger: TATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCTGACAAGTCGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CAA 72 bp TCGCCGGTCCCCACGTTCTGCAGCCTCTATCTTCATTaGTTCTCTCTTGTAGCTGCGCTGATACGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: SPVPTFCSLYLH*FSLVAALIRCY
Trigger: GTAACAGCGTATCAGCGCAGCTACAAGAGAGAACAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGGCTGTGGCTGCGATaGTGGTGGTTGTGGTACAAT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGLWLR*WWLWYN
Trigger: ATTGTACCACAACCACCATCATCGCAGCCACAGCCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCTGGTCCCATTATCTaGGCCTGCTGTACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPGPII*ACCTED
Trigger: GTCCTCTGTACAGCAGGCTCAGATAATGGGACCAGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGCTGCAGTACCACCTTaGCTGGTACTGAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREAAVPP*LVLKVF
Trigger: AAAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTTAACTTGGCGGTTTaGGCGTCTCTTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLNLAV*ASLLNA
Trigger: AGCATTCAGAAGAGACGCTCAAACCGCCAAGTTAAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTAACTTGGCGGTTTaGGCGTCTCTTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLNLAV*ASLLNA
Trigger: AGCATTCAGAAGAGACGCTCAAACCGCCAAGTTAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCTGGGTGCCTTGACTaGATCCGTTTAAATTCTCGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSGCLD*IRLNSR
Trigger: TCGAGAATTTAAACGGATTCAGTCAAGGCACCCAGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTCTGGGTGCCTTGACTaGATCCGTTTAAATTCTCGA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSGCLD*IRLNSR
Trigger: TCGAGAATTTAAACGGATTCAGTCAAGGCACCCAGA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGACGATTCACCCTTTTaGGTTCTGGGTGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEDDSPF*VLGALT
Trigger: AGTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGGACAGTGGGGCAATaGCCAAGAAGGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTWTVGQ*PRRDHG
Trigger: TCCATGGTCCCTTCTTGGTCATTGCCCCACTGTCCA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGATGAGGCGTCCCCGTaGATCTTTGCAGTACATTTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEDEASP*IFAVHF
Trigger: GAAATGTACTGCAAAGATTCACGGGGACGCCTCATC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCAATGGTGTTCCTGTaGGTAGCACCTTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEAMVFL*VAPCVP
Trigger: TGGAACACAAGGTGCTACTCACAGGAACACCATTGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGATCCCCAAAGTCCTTaGGAAACTCTGATTCTGAGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEDPQSP*ETLILR
Trigger: CCTCAGAATCAGAGTTTCTCAAGGACTTTGGGGATC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGATCCCCAAAGTCCTTaGGAAACTCTGATTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDPQSP*ETLILR
Trigger: CCTCAGAATCAGAGTTTCTCAAGGACTTTGGGGATC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGATCCCCAAAGTCCTTaGGAAACTCTGATTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDPQSP*ETLILR
Trigger: CCTCAGAATCAGAGTTTCTCAAGGACTTTGGGGATC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATGGCCTGTAGCTTTTaGACCTGTTCCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEMACSF*TCSSVL
Trigger: CAAGACAGAGGAACAGGTTCAAAAGCTACAGGCCAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATGGCCTGTAGCTTTTaGACCTGTTCCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTMACSF*TCSSVL
Trigger: CAAGACAGAGGAACAGGTTCAAAAGCTACAGGCCAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTAGGCATGTTGGTATaGCCTGCCCCTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELGMLV*PAPLER
Trigger: CCTTTCCAAAGGGGCAGGTCATACCAACATGCCTAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCATCATCTTCCTCCATaGTGGCTGCATATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREHHLPP*WLHMLL
Trigger: AAGGAGCATATGCAGCCATCATGGAGGAAGATGATG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGCTTGAAGCGTCCATaGGATAAAATATCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRLKRP*DKISRH
Trigger: ATGGCGAGATATTTTATCTCATGGACGCTTCAAGCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAGTCATACGTCGCTTaGAGCGTCCATGAGATAAAA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQSYVA*SVHEIK
Trigger: TTTTATCTCATGGACGCTTCAAGCGACGTATGACTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GGGCAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTAGTACCTTGTTACACTaGTGTTTCAAGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: GQSPEARINGLAVGSPGLSTLLH*CFKCFL
Trigger: TAAGAAGCACTTGAAACATCAGTGTAACAAGGTACT...AAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCAATTTCTTTCAGCTTaGAGGCTGCTTCACAACGCC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTQFLSA*RLLHNA
Trigger: GGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCAATTTCTTTCAGCTTaGAGGCTGCTTCACAACGCC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLQFLSA*RLLHNA
Trigger: GGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERSTSR*LGSSMH
Trigger: GTGCATGGAAGAGCCTAATCACCTTGATGTGGACCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAACAGCAAACTCTGGATaGCCCTGTAACCACATCTCC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNETANSG*PCNHIS
Trigger: GGAGATGTGGTTACAGGGTCATCCAGAGTTTGCTGT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTGGCAAAACCCGGTTaGACACCGTTTCAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELAKPG*TPFQCD
Trigger: ATCACACTGAAACGGTGTTCAACCGGGTTTTGCCAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATCTTCACTGGAGTCTaGGTTAGCTGGCATCATAGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLIFTGV*VSWHHR
Trigger: CCTATGATGCCAGCTAACTCAGACTCCAGTGAAGAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATCTTCACTGGAGTCTaGGTTAGCTGGCATCATAGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEIFTGV*VSWHHR
Trigger: CCTATGATGCCAGCTAACTCAGACTCCAGTGAAGAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAAGGGCCAGAGTAAATaGAAATACAGCAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEKGQSK*KYSSRP
Trigger: TGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCTT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCATGTCAGATTGTCCTaGCCTTCATGGAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHVRLS*PSWSKM
Trigger: CATCTTGCTCCATGAAGGTCAGGACAATCTGACATG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCATGTCAGATTGTCCTaGCCTTCATGGAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMHVRLS*PSWSKM
Trigger: CATCTTGCTCCATGAAGGTCAGGACAATCTGACATG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTTTCCAGCAGGAGCTaGACCCTTAACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVSSRS*TLNWLE
Trigger: CTCCAGCCAGTTAAGGGTTCAGCTCCTGCTGGAAAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTCCCTAGCACAACATaGCGATGTCCTTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLPSTT*RCPWGP
Trigger: AGGTCCCCAAGGACATCGGCATGTTGTGCTAGGGAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCTGTAACACTATCTTaGCTGGTAGACTCCCTAGCA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPVTLS*LVDSLA
Trigger: TGCTAGGGAGTCTACCAGGCAAGATAGTGTTACAGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCACTACCTTGGCAGGCTaGCCTTGGGCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTTTLAG*PWAFLA
Trigger: AGCCAAGAATGCCCAAGGGCAGCCTGCCAAGGTAGT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTTGCTGTGGCTGCTaGACCTGCAGCTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFCCGC*TCSWIV
Trigger: AACTATCCAGCTGCAGGTGCAGCAGCCACAGCAAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCTGGTGTTCCAATCTaGGGTTTTCCTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSGVPI*GFPPFL
Trigger: CAGGAATGGAGGAAAACCGCAGATTGGAACACCAGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCTGGTGTTCCAATCTaGGGTTTTCCTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSGVPI*GFPPFL
Trigger: CAGGAATGGAGGAAAACCGCAGATTGGAACACCAGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTCTCGCAATGGCCTCTaGTACAATCCGATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSRNGL*YNPICF
Trigger: AAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCGCCATCTGGTTCTTaGACTGGTTCAGGGAGGATA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESPSGS*TGSGRI
Trigger: TATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTCTCCACAAAGAACTaGATGGAAGGCAAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVFSTKN*MEGKVS
Trigger: CGAGACTTTGCCTTCCATGCAGTTCTTTGTGGAGAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTTTTAGCTCCCATGTaGTATCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLLAPM*YPHRAE
Trigger: CTCTGCCCTATGAGGATAGCACATGGGAGCTAAAAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTTTAGCTCCCATGTaGTATCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLLAPM*YPHRAE
Trigger: CTCTGCCCTATGAGGATAGCACATGGGAGCTAAAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTCTCATCAGCCAGGATaGAGTTCTGCCTGTTATACC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESHQPG*SSACYT
Trigger: GGTATAACAGGCAGAACTGCATCCTGGCTGATGAGA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCTCATCAGCCAGGATaGAGTTCTGCCTGTTATACC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSHQPG*SSACYT
Trigger: GGTATAACAGGCAGAACTGCATCCTGGCTGATGAGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCTCATCAGCCAGGATaGAGTTCTGCCTGTTATACC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSHQPG*SSACYT
Trigger: GGTATAACAGGCAGAACTGCATCCTGGCTGATGAGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGCGTCAAACTTGTATaGGCCTGGGATGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSVKLV*AWDEAS
Trigger: GGACGCCTCATCCCAGGCGCATACAAGTTTGACGCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGTTCCAGGTCCATGTaGTTGAGACTATCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMCSRSM*LRLSSS
Trigger: GCTGCTTGATAGTCTCAAGCACATGGACCTGGAACA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTTCCAGGTCCATGTaGTTGAGACTATCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCSRSM*LRLSSS
Trigger: GCTGCTTGATAGTCTCAAGCACATGGACCTGGAACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGTTCCAGGTCCATGTaGTTGAGACTATCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRECSRSM*LRLSSS
Trigger: GCTGCTTGATAGTCTCAAGCACATGGACCTGGAACA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTGTTCCAGGTCCATGTaGTTGAGACTATCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTCSRSM*LRLSSS
Trigger: GCTGCTTGATAGTCTCAAGCACATGGACCTGGAACA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAATTCGATGACATCGTaGCTGGGCCTGCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNENSMTS*LGLQVI
Trigger: AATGACCTGCAGGCCCAGGCACGATGTCATCGAATT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAGAAGCAACAAAGCTTaGCTTAGCAAAGGTGGAACC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVRSNKA*LSKGGT
Trigger: GGTTCCACCTTTGCTAAGGCAAGCTTTGTTGCTTCT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGAAGCAACAAAGCTTaGCTTAGCAAAGGTGGAACC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRSNKA*LSKGGT
Trigger: GGTTCCACCTTTGCTAAGGCAAGCTTTGTTGCTTCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCATATACCAGGAGATaGTTTTCCACCCGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPYTRR*FSTRKQ
Trigger: CTGCTTTCGGGTGGAAAAGCATCTCCTGGTATATGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCACTCGATGTTCTGCTaGAATTGCTTTGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVHSMFC*NCFVIW
Trigger: CCAGATGACAAAGCAATTGCAGCAGAACATCGAGTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTTCTCTCTTGTAGCTaGGCTGATACGCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVLSCS*ADTLLL
Trigger: TAGTAACAGCGTATCAGCGCAGCTACAAGAGAGAAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCGATCCCAATGGAACTaGATGGTGTCAGGGTCATAT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTRSQWN*MVSGSY
Trigger: ATATGACCCTGACACCATGCAGTTCCATTGGGATCG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGGAGGCTGACACAATaGCAGCCGATCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERRLTQ*QPIFQK
Trigger: CTTTTGGAAGATCGGCTGGCATTGTGTCAGCCTCCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGAGAAGTCTGGGTCCTaGATGATGTTGCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLEKSGS*MMLQSV
Trigger: AACAGACTGCAACATCATGCAGGACCCAGACTTCTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGAGAAGTCTGGGTCCTaGATGATGTTGCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEEKSGS*MMLQSV
Trigger: AACAGACTGCAACATCATGCAGGACCCAGACTTCTC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGAGCTGGTGCTCCTaGTTGATGGTTCTGCATATA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWSWCS*LMVLHI
Trigger: TATATGCAGAACCATCAAGCAGGAGCACCAGCTCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGGAGCTGGTGCTCCTaGTTGATGGTTCTGCATATA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMWSWCS*LMVLHI
Trigger: TATATGCAGAACCATCAAGCAGGAGCACCAGCTCCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTGGAGCTGGTGCTCCTaGTTGATGGTTCTGCATATA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEWSWCS*LMVLHI
Trigger: TATATGCAGAACCATCAAGCAGGAGCACCAGCTCCA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTGGCCACCACCTCGTaGTCTAGCTTTAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELATTS*SSFKVR
Trigger: TCTGACTTTAAAGCTAGAGCACGAGGTGGTGGCCAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAAGATGGTGACAGCTTaGTCAAGTCCAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEKMVTA*SSPAQS
Trigger: ACTCTGAGCTGGACTTGAGCAAGCTGTCACCATCTT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAAGATGGTGACAGCTTaGTCAAGTCCAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLKMVTA*SSPAQS
Trigger: ACTCTGAGCTGGACTTGAGCAAGCTGTCACCATCTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGTCTAGCAAGTGGTTaGCTGGCCCCAAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECLASG*LAPKFL
Trigger: GAGGAATTTTGGGGCCAGGCAACCACTTGCTAGACA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCCACTTCTGTTTTCTaGGATCCTCCATATACGCTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGATSVF*DPPYTL
Trigger: TAGCGTATATGGAGGATCGCAGAAAACAGAAGTGGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGTTGGAACGTGTTATaGAGAGATAGAGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVCWNVL*RDRDPV
Trigger: CACTGGGTCTCTATCTCTGCATAACACGTTCCAACA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTTGGAACGTGTTATaGAGAGATAGAGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCWNVL*RDRDPV
Trigger: CACTGGGTCTCTATCTCTGCATAACACGTTCCAACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACTGTAGGCCACTACTaGTGTGTTGGAACGTGTTAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTVGHY*CVGTCY
Trigger: ATAACACGTTCCAACACAGCAGTAGTGGCCTACAGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTAGGCCACTACTaGTGTGTTGGAACGTGTTAT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVTVGHY*CVGTCY
Trigger: ATAACACGTTCCAACACAGCAGTAGTGGCCTACAGT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGATGCAGAAGTGGCACTaGTGTGACCCAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREMQKWH*CDPKMT
Trigger: TGTCATCTTTGGGTCACAGCAGTGCCACTTCTGCAT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTGGCTCTTGGAGACTTaGAAAAGTCCTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTWLLET*KSPDVG
Trigger: GCCAACATCAGGACTTTTGCAAGTCTCCAAGAGCCA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAGGCAAGAAACAAGTaGATGTCAGATTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEARNK*MSDCPD
Trigger: GTCAGGACAATCTGACATGCACTTGTTTCTTGCCTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCCATGATGGGGTCTaGCATCTTGGGAAAGTAATG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIHDGV*HLGKVM
Trigger: CATTACTTTCCCAAGATGGCAGACCCCATCATGGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTGATCTCGGCTCACTaGAACCTCTGCCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVISAH*NLCLLG
Trigger: ACCCAGAAGGCAGAGGTTGCAGTGAGCCGAGATCAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCGATTCACCCTTCATaGAGCAAGATGGCTACGTCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSIHPS*SKMATS
Trigger: AGACGTAGCCATCTTGCTCCATGAAGGGTGAATCGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430710.8
ENST00000645929.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTCAGGGCTGCCAGCTaGTTGCCCTGTAACACTATC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVRAAS*LPCNTI
Trigger: GATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGCTGCACCTGCAGCTaGATAGTTACTACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECCTCS*IVTTLA
Trigger: TGCCAAGGTAGTAACTATCCAGCTGCAGGTGCAGCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCACGGGCTCTCGCAATaGCCTCTGCTACAATCCGAT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTHGLSQ*PLLQSD
Trigger: ATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPLAER*ATRPHL
Trigger: TAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEIWFLH*FREDRL
Trigger: GAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACAAAGTCTCGCCATCTaGTTCTTGCACTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEQSLAI*FLHWFR
Trigger: CCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCACCTCTACGTAGTCTaGATTAAAGGGCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVHLYVV*IKGLFI
Trigger: GATGAAGAGCCCTTTAATCCAGACTACGTAGAGGTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAGTAATTGTGGACAGTaGGGCAATGACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESNCGQ*GNDQEG
Trigger: CCCTTCTTGGTCATTGCCCCACTGTCCACAATTACT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGTAATTGTGGACAGTaGGGCAATGACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSNCGQ*GNDQEG
Trigger: CCCTTCTTGGTCATTGCCCCACTGTCCACAATTACT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAGTAATTGTGGACAGTaGGGCAATGACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSNCGQ*GNDQEG
Trigger: CCCTTCTTGGTCATTGCCCCACTGTCCACAATTACT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGGCCAGACTGCCATaGTACACAATAGTGTTCATT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLARLP*YTIVFI
Trigger: AATGAACACTATTGTGTACCATGGCAGTCTGGCCAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTGATGAGATATGGGTaGTTGCAGCACTTGCGCAAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLMRYG*LQHLRN
Trigger: GTTGCGCAAGTGCTGCAACCACCCATATCTCATCAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTGATGAGATATGGGTaGTTGCAGCACTTGCGCAAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLMRYG*LQHLRN
Trigger: GTTGCGCAAGTGCTGCAACCACCCATATCTCATCAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGACCATTGATGAGATATaGGTGGTTGCAGCACTTGCG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMETIDEI*VVAALA
Trigger: CGCAAGTGCTGCAACCACCCATATCTCATCAATGGT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACCATTGATGAGATATaGGTGGTTGCAGCACTTGCG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTIDEI*VVAALA
Trigger: CGCAAGTGCTGCAACCACCCATATCTCATCAATGGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAATGGCCCGACAAATaGTCTCCACATCTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEWPDK*SPHLVQ
Trigger: CTGAACGAGATGTGGAGACCATTTGTCGGGCCATTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTGCCATTTTCAGCTaGGCTAATCAAGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLAIFS*ANQVPD
Trigger: ATCTGGGACTTGATTAGCCCAGCTGAAAATGGCAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAACACCTTTTCTGCTTaGTCTCCAATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGNTFSA*SPITSC
Trigger: GCAGGAGGTTATTGGAGACCAAGCAGAAAAGGTGTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATATGTCAATCTCACTaGCAATCGCACCCCCTAACA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGICQSH*QSHPLT
Trigger: TGTTAGGGGGTGCGATTGCCAGTGAGATTGACATAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATATGTCAATCTCACTaGCAATCGCACCCCCTAACA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVICQSH*QSHPLT
Trigger: TGTTAGGGGGTGCGATTGCCAGTGAGATTGACATAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCTTCGCCGGTCCCCACGTTCTGCAGCCTCTATCTTCATTTGTTCTCTCTTGTGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: AFAGPHVLQPLSSFVLSCVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...ACAAGAGAGAACAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGGCGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWGTLE*FIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTCCTTTGGGGGACCTTaGAGTGGTTTATATTCAGGA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSFGGP*SGLYSG
Trigger: TCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCCTTTGGGGGACCTTaGAGTGGTTTATATTCAGGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSFGGP*SGLYSG
Trigger: TCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEIILVL*GTLEWF
Trigger: AAACCACTCCAAGGTCCCCCAAAGGACCAAGATGAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TCATCAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SSRDHPHHLGPLGDLGVVKWPGC*VTWASS
Trigger: AGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTT...AACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCCAATGGAACTGCATaGTGTCAGGGTCATATTCCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPNGTA*CQGHIP
Trigger: TGGAATATGACCCTGACACCATGCAGTTCCATTGGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCCAATGGAACTGCATaGTGTCAGGGTCATATTCCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPNGTA*CQGHIP
Trigger: TGGAATATGACCCTGACACCATGCAGTTCCATTGGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATGGCCACAAAGCCATaGAAGTACTTGGTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGMATKP*KYLVRL
Trigger: AAGCCTTACCAAGTACTTCCATGGCTTTGTGGCCAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATCCTCCAGTTTGACTaGTGGAACACTCCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEILQFD*WNTPGN
Trigger: GTTTCCCGGAGTGTTCCACCAGTCAAACTGGAGGAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGCTTTGAGCGGGACTaGTCAGTTAGCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESFERD*SVSFSS
Trigger: GGAAGAGAAGCTAACTGACCAGTCCCGCTCAAAGCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTTGGGAATCCATCTTaGGACATAGTGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREFGNPS*DIVRDR
Trigger: CCTGTCCCTCACTATGTCCCAAGATGGATTCCCAAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTTGGGAATCCATCTTaGGACATAGTGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFGNPS*DIVRDR
Trigger: CCTGTCCCTCACTATGTCCCAAGATGGATTCCCAAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATACTACTTCGTGGTGTaGGGACTGGAGAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEYYFVV*GLESHH
Trigger: ATGGTGACTCTCCAGTCCCCACACCACGAAGTAGTA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTTCCTCCTCTGCCATaGAAGCTGCACTACTACTTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELPPLP*KLHYYF
Trigger: GAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCACTACTGCTGTGTTaGAACGTGTTATGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPLLLC*NVLCRD
Trigger: ATCTCTGCATAACACGTTCCAACACAGCAGTAGTGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGTGGTGATGAAGCATaGTGCTGGAGTCTACATGAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGGDEA*CWSLHE
Trigger: CTCATGTAGACTCCAGCACCATGCTTCATCACCACC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGCGCTACATAGTCTGTaGTTAATGGAGGTGACTAGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREALHSL*LMEVTR
Trigger: CCTAGTCACCTCCATTAACCACAGACTATGTAGCGC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGCGCTACATAGTCTGTaGTTAATGGAGGTGACTAGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEALHSL*LMEVTR
Trigger: CCTAGTCACCTCCATTAACCACAGACTATGTAGCGC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCAGAGGAAGATGGTaGAACTCCTGCTCATACTGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFRGRW*NSCSYC
Trigger: GCAGTATGAGCAGGAGTTCCACCATCTTCCTCTGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643469.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGGAGCTGTTTCCTCTaGTGGAGGGACCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGSCFL*WRDQFT
Trigger: AGTGAACTGGTCCCTCCACCAGAGGAAACAGCTCCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGAGCTGTGGATTCTTTaGAAAGTTCTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLELWIL*KVLWEL
Trigger: CAGCTCCCACAGAACTTTCCAAAGAATCCACAGCTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTGGAGCTGGAGCTGTaGATTCTTTGGAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLELEL*ILWKVL
Trigger: CAGAACTTTCCAAAGAATCCACAGCTCCAGCTCCAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGA