RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHD8 (Homo sapiens)

Ensembl gene IDs: ENSG00000100888

Ensembl transcript IDs: ENST00000430710.8, ENST00000553283.1, ENST00000553622.5, ENST00000553651.2, ENST00000553870.2, ENST00000554384.1, ENST00000555301.1, ENST00000555935.2, ENST00000555962.6, ENST00000556833.1, ENST00000557329.1, ENST00000557364.6, ENST00000557727.1, ENST00000642518.1, ENST00000642914.1, ENST00000643048.1, ENST00000643469.1, ENST00000645140.1, ENST00000645206.1, ENST00000645929.1, ENST00000646063.1, ENST00000646340.1, ENST00000646558.1, ENST00000646647.2

Found 1779 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCCGAAGCCTAGCTGTTAGGGCAGAGCCCGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACCTGGGCTTCATCTCCATCAATCACT +
Preference number: 1 (lower is better)
Translates to: RRSLAVRAEPGGQNK*PGCWVTWASSPSIT
Trigger: AGTGATTGATGGAGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCCTAACAGCTAGGCTTCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR TCA 90 bp ATGGCCTGGCTGTTGGGTCACCTGGGCTTCATCTCCATCAATCACTaGGATCTCCTCATCCATCATCATCAAGGGATCACCCTCATCATC +
Preference number: 1 (lower is better)
Translates to: MAWLLGHLGFISINH*DLLIHHHQGITLII
Trigger: GATGATGAGGGTGATCCCTTGATGATGATGGATGAGGAGATCTCAGTGATTGATGGAGATGAAGCCCAGGTGACCCAACAGCCAGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR TCA 90 bp GACTTGTCAGCCTCACTGTCCCACCAAGTTGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCATATGTCAATCTCACTGGCAATCGCA +
Preference number: 1 (lower is better)
Translates to: DLSASLSHQVVGTSS*STTGNHMSISLAIA
Trigger: TGCGATTGCCAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCTGACAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 90 bp TCCAATGAGCAGCGACTTGTCAGCCTCACTGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCACTACTGGGAACCATATGTCAATCTC +
Preference number: 1 (lower is better)
Translates to: SNEQRLVSLTVPPSC*NLQLIHYWEPYVNL
Trigger: GAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCTGACAAGTCGCTGCTCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 90 bp CAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTCACAATCTTTATCAAAGTCAACCCC +
Preference number: 1 (lower is better)
Translates to: QGITLIILVLWGTLE*FIFRIFTIFIKVNP
Trigger: GGGGTTGACTTTGATAAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCACCTCCTGGAGTCCTaGACTTCCCCACATCTCCCC +
Preference number: 2 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVHLLES*TSPHLP
Trigger: GGGGAGATGTGGGGAAGTCCAGGACTCCAGGAGGTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCACCTCCTGGAGTCCTaGACTTCCCCACATCTCCCC +
Preference number: 2 (lower is better)
Translates to: QRLGPALHSLWLMEVTREHLLES*TSPHLP
Trigger: GGGGAGATGTGGGGAAGTCCAGGACTCCAGGAGGTG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTCCCCACATCTCCCCTaGCCCTCCCACGTTTCCATA +
Preference number: 2 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESPHLP*PSHVSI
Trigger: TATGGAAACGTGGGAGGGGCAGGGGAGATGTGGGGA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGTGAGCACACCAGCTaGTCTAGTCTCCTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGEHTS*SSLLSF
Trigger: GAAGGAAAGGAGACTAGAGCAGCTGGTGTGCTCACC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAAGGGCCAGAGTAAATaGAAATACAGCAGCCGCCCA +
Preference number: 2 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVKGQSK*KYSSRP
Trigger: TGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCTT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR TCA 90 bp GCAATTTCTTTCAGCTTGAAGGCTGCTTCACAACGCCGCCTTCGCCGGTCCCCAGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCAT +
Preference number: 2 (lower is better)
Translates to: AISFSLKAASQRRLRRSPVGTSS*STTGNH
Trigger: ATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAAC...TGGGGACCGGCGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGGTGAGCACACCAGCTaGTCTAGTCTCCTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTGEHTS*SSLLSF
Trigger: GAAGGAAAGGAGACTAGAGCAGCTGGTGTGCTCACC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGTGAGCACACCAGCTaGTCTAGTCTCCTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGEHTS*SSLLSF
Trigger: GAAGGAAAGGAGACTAGAGCAGCTGGTGTGCTCACC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTCCTTTTCACCTCCTaGAGTCCTGGACTTCCCCAC +
Preference number: 2 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFLFTS*SPGLPH
Trigger: GTGGGGAAGTCCAGGACTCCAGGAGGTGAAAAGGAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTCCTTTTCACCTCCTaGAGTCCTGGACTTCCCCAC +
Preference number: 2 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFLFTS*SPGLPH
Trigger: GTGGGGAAGTCCAGGACTCCAGGAGGTGAAAAGGAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR CCA 90 bp GGGCAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCAGTTGATCCACTACTaGGAACCATATGTCAATCTC +
Preference number: 2 (lower is better)
Translates to: GQSPEARINGLAVGSPGLQLIHY*EPYVNL
Trigger: GAGATTGACATATGGTTCCCAGTAGTGGATCAACTG...AAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAAGGGCCAGAGTAAATaGAAATACAGCAGCCGCCCA +
Preference number: 2 (lower is better)
Translates to: QRLGPALHSLWLMEVTREKGQSK*KYSSRP
Trigger: TGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCTT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR-3UTR CCA 90 bp CAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCATTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTC +
Preference number: 2 (lower is better)
Translates to: QSPEARINGLAVGSPGLHWGTLE*FIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCA...ATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CCA 90 bp CAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCATCTGGGTCTGCCCTCATaGTATTATATTTCTCATAGC +
Preference number: 2 (lower is better)
Translates to: QSPEARINGLAVGSPGLHLGLPS*YYISHS
Trigger: GCTATGAGAAATATAATACCATGAGGGCAGACCCAG...ATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CAA 90 bp CGACTTGTCAGCCTCACTGTCCCACCAAGTTGTTGGAACCTCCAGTaGATCCACTACTGGGAACCATATGTCAATCTCACTGGCAATCGC +
Preference number: 2 (lower is better)
Translates to: RLVSLTVPPSCWNLQ*IHYWEPYVNLTGNR
Trigger: GCGATTGCCAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCTGACAAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR GCA 90 bp CATCATCAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGCACTCGATGTTCTGCTaGAATTGCTTTGTCATCTGG +
Preference number: 2 (lower is better)
Translates to: HHQGITLIILVLWGTLEWHSMFC*NCFVIW
Trigger: CCAGATGACAAAGCAATTGCAGCAGAACATCGAGTG...CCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CCA 90 bp GCCTTCGCCGGTCCCCACGTTCTGCAGCCTCTATCTTCATTTGTTCTCTCTTGTAACACCTTTTCTGCTTaGTCTCCAATAACCTCCTGC +
Preference number: 2 (lower is better)
Translates to: AFAGPHVLQPLSSFVLSCNTFSA*SPITSC
Trigger: GCAGGAGGTTATTGGAGACCAAGCAGAAAAGGTGTT...ACAAGAGAGAACAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGGCGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGGATTTCATCATGTTaGCCAGGCTTAGAGTCTCTT +
Preference number: 2 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGISSC*PGLESL
Trigger: AAGAGACTCTAAGCCTGGGCAACATGATGAAATCCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
3UTR-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCAATCCTCTCATAATTaGGAGCAATCAGGTACATTT +
Preference number: 2 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEQSSHN*EQSGTF
Trigger: AAATGTACCTGATTGCTCCCAATTATGAGAGGATTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR CAA 90 bp ATGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTGCAATTGCTTaGTCATCTGGTCGGCCAGCCTTTTCTAGGAAACATAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: MSEKLSNTRCSAAIA*SSGRPAFSRKHKAG
Trigger: CCCAGCCTTATGTTTCCTAGAAAAGGCTGGCCGACCAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CCA 90 bp TCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGGATCTTCACAAGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 2 (lower is better)
Translates to: SSWSFGGPWSGLYSGSSQVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...TTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CAA 90 bp CTACTATGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTGCAATaGCTTTGTCATCTGGTCGGCCAGCCTTTTCTAGGAAACATAAGG +
Preference number: 2 (lower is better)
Translates to: LLCQRSYPTLDVLLQ*LCHLVGQPFLGNIR
Trigger: CCTTATGTTTCCTAGAAAAGGCTGGCCGACCAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACATAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR GCA 90 bp AAGTTGTTGGAACCTCCAGTTGATCCACTACTGGGAACCATATGTCAATCTCACTTTCCGGATCCAATCTaGCTTATGGATATCAAAAGT +
Preference number: 2 (lower is better)
Translates to: KLLEPPVDPLLGTICQSHFPDPI*LMDIKS
Trigger: ACTTTTGATATCCATAAGGCAGATTGGATCCGGAAA...GTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CAA 90 bp TACCTTGTTACACTGATGTTTCAAGTGCTTCTTATAACTTTCATCTaGGAACAAAGTGTCAGGGTTATATTTCCGGATCCAATCTGCCTT +
Preference number: 2 (lower is better)
Translates to: YLVTLMFQVLLITFI*EQSVRVIFPDPICL
Trigger: AAGGCAGATTGGATCCGGAAATATAACCCTGACACTTTGTTCCAAGATGAAAGTTATAAGAAGCACTTGAAACATCAGTGTAACAAGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR GCA 72 bp TTTCTCCCGCCGTGCAATTTCTTTCAGCTTGAAGGCTaGTTCACAACGCCGCCTTCGCCGGTCCCCACGTTC +
Preference number: 3 (lower is better)
Translates to: FLPPCNFFQLEG*FTTPPSPVPTF
Trigger: GAACGTGGGGACCGGCGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGCACGGCGGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp CTAGCTGTTAGGGCAGAGCCCGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACCTGGGCTTCATCTCCA +
Preference number: 3 (lower is better)
Translates to: LAVRAEPGGQNK*PGCWVTWASSP
Trigger: TGGAGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCCTAACAGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp GCAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCTCCATCAATCACTGAG +
Preference number: 3 (lower is better)
Translates to: AEPGGQNKWPGC*VTWASSPSITE
Trigger: CTCAGTGATTGATGGAGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CAA 90 bp CCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCATCTCCATCACTGTCCCACCAAGTaGTTGGAACCTCCAGTTGAT +
Preference number: 3 (lower is better)
Translates to: PEARINGLAVGSPGLHLHHCPTK*LEPPVD
Trigger: ATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTG...ATGGAGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp CAGCGACTTGTCAGCCTCACTGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCACTACTGGGAACCATAT +
Preference number: 3 (lower is better)
Translates to: QRLVSLTVPPSC*NLQLIHYWEPY
Trigger: ATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCTGACAAGTCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR TCA 72 bp GCCTCACTGTCCCACCAAGTTGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCATATGTCAATCTCACTG +
Preference number: 3 (lower is better)
Translates to: ASLSHQVVGTSS*STTGNHMSISL
Trigger: CAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp CCACCAAGTTGTTGGAACCTCCAGTTGATCCACTACTaGGAACCATATGTCAATCTCACTGGCAATCGCACC +
Preference number: 3 (lower is better)
Translates to: PPSCWNLQLIHY*EPYVNLTGNRT
Trigger: GGTGCGATTGCCAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CAA 90 bp CAACCCCTTCTACTATGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTGCAATGTTGGAACCTCCAGTaGATCCACTACTGGGAACCA +
Preference number: 3 (lower is better)
Translates to: QPLLLCQRSYPTLDVLLQCWNLQ*IHYWEP
Trigger: TGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACA...TTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACATAGTAGAAGGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CAA 90 bp ATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGGATCTTCACATGTCCCACCAAGTTGTaGGAACCTCCAGTTGATCCA +
Preference number: 3 (lower is better)
Translates to: IILVLWGTLEWFIFRIFTCPTKL*EPPVDP
Trigger: TGGATCAACTGGAGGTTCCAACAACTTGGTGGGACA...TGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp CATCATCAAGGGATCACCCTCATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTTATATTCAGGATCTTC +
Preference number: 3 (lower is better)
Translates to: HHQGITLIILVL*GTLEWFIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR-3UTR CAA 90 bp TCATCAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTCTTATAACTTTCATCTaGGAACAAAGTGTCAGGGTT +
Preference number: 3 (lower is better)
Translates to: SSRDHPHHLGPLGDLGVVLITFI*EQSVRV
Trigger: AACCCTGACACTTTGTTCCAAGATGAAAGTTATAAG...AACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR GCA 72 bp TATGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTaGAATTGCTTTGTCATCTGGTCGGCCAGCCTTTTC +
Preference number: 3 (lower is better)
Translates to: YVREVIQHSMFC*NCFVIWSASLF
Trigger: GAAAAGGCTGGCCGACCAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR GCA 72 bp TACTATGTCAGAGAAGTTATCCAACACTCGATGTTCTaGTGCAATTGCTTTGTCATCTGGTCGGCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: YYVREVIQHSMF*CNCFVIWSASL
Trigger: AAGGCTGGCCGACCAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACATAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp GGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTaGAGTGGTTTATATTCAGGATCTTCACAATCTTTA +
Preference number: 3 (lower is better)
Translates to: GSPSSSWSFGGP*SGLYSGSSQSL
Trigger: TAAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CCA 72 bp ACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTCACAATCTTTATCAAA +
Preference number: 3 (lower is better)
Translates to: TLIILVLWGTLE*FIFRIFTIFIK
Trigger: TTTGATAAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCCTGCAGTGGCTGTaGGGGGCCGGTTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLLQWL*GAGSPL
Trigger: GAGGGGCGAACCGGCCCCCCACAGCCACTGCAGGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000430710.8
ENST00000557364.6
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGCGGTAGTCACTGGTaGAGAGGGGTAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGGSHW*RGVARG
Trigger: GCCCCTGGCTACCCCTCTTCACCAGTGACTACCGCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCCTGCAGTGGCTGTaGGGGGCCGGTTCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELLQWL*GAGSPL
Trigger: GAGGGGCGAACCGGCCCCCCACAGCCACTGCAGGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000430710.8
ENST00000557364.6
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGGCTGCCGCTGTGCTaGCTGCAGATGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGLPLC*LQMLPP
Trigger: AGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGGCTGCCGCTGTGCTaGCTGCAGATGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGLPLC*LQMLPP
Trigger: AGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCGGCGAAGTTTGGTaGACTGGGCTGCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLGEVW*TGLPLC
Trigger: GCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGCGGTAGTCACTGGTaGAGAGGGGTAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGGSHW*RGVARG
Trigger: GCCCCTGGCTACCCCTCTTCACCAGTGACTACCGCC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGCGGTAGTCACTGGTaGAGAGGGGTAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGGSHW*RGVARG
Trigger: GCCCCTGGCTACCCCTCTTCACCAGTGACTACCGCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTGCCACCAGGGGCTaGGCTGTGCTGGTGATACCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPATRG*AVLVIP
Trigger: AGGTATCACCAGCACAGCTCAGCCCCTGGTGGCAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGGGTGGAGGGTGGCTaGTGGGGCTGTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMWVEGG*WGCGCD
Trigger: ATCGCAGCCACAGCCCCAGCAGCCACCCTCCACCCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGGTGGAGGGTGGCTaGTGGGGCTGTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWVEGG*WGCGCD
Trigger: ATCGCAGCCACAGCCCCAGCAGCCACCCTCCACCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTGGGTGGAGGGTGGCTaGTGGGGCTGTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTWVEGG*WGCGCD
Trigger: ATCGCAGCCACAGCCCCAGCAGCCACCCTCCACCCA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGCCAGGAACAGGCTCTaGCAGAGGCTAGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEARNRL*QRLGPA
Trigger: CGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCTGGC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGCCAGGAACAGGCTCTaGCAGAGGCTAGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTARNRL*QRLGPA
Trigger: CGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCTGGC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGCTGGAGGACCAGCTaGTTTACTGGTCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGWRTS*FTGRLG
Trigger: GCCCAGCCGACCAGTAAAGCAGCTGGTCCTCCAGCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTGGAGGGTGGCTGCTaGGGCTGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVEGGC*GCGCDD
Trigger: ATCATCGCAGCCACAGCCCCAGCAGCCACCCTCCAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCGCCTTCCTCCTCTaGCCGAACGCTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLAFLL*PNAGQL
Trigger: GAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGGTTGGTCGGCTCCTaGCCACCACCTCGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGLVGS*PPPRAL
Trigger: TAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGGTTGGTCGGCTCCTaGCCACCACCTCGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGLVGS*PPPRAL
Trigger: TAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCAGTGGGGGCCCTGTaGCCCCAGGGTTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSVGAL*PQGFQQ
Trigger: CTGCTGGAAACCCTGGGGCCACAGGGCCCCCACTGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCAGTGGGGGCCCTGTaGCCCCAGGGTTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSVGAL*PQGFQQ
Trigger: CTGCTGGAAACCCTGGGGCCACAGGGCCCCCACTGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTCGGCGAAGTTTGGTaGACTGGGCTGCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLGEVW*TGLPLC
Trigger: GCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCGGCGAAGTTTGGTaGACTGGGCTGCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLGEVW*TGLPLC
Trigger: GCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTCGGCGAAGTTTGGTaGACTGGGCTGCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLGEVW*TGLPLC
Trigger: GCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGCGGTAGTCACTGGTaGAGAGGGGTAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGGSHW*RGVARG
Trigger: GCCCCTGGCTACCCCTCTTCACCAGTGACTACCGCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCTTAGGGGCTGACTaGGGTGGCTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGILGAD*GGCPPA
Trigger: TGCTGGAGGGCAGCCACCTCAGTCAGCCCCTAAGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTGCCACCAGGGGCTaGGCTGTGCTGGTGATACCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPATRG*AVLVIP
Trigger: AGGTATCACCAGCACAGCTCAGCCCCTGGTGGCAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCTGCCACCAGGGGCTaGGCTGTGCTGGTGATACCT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPATRG*AVLVIP
Trigger: AGGTATCACCAGCACAGCTCAGCCCCTGGTGGCAGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGCTGGACAATGCGCTaGACAGCAGCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGWTMR*TAAWFP
Trigger: TGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGGTGGAGGGTGGCTaGTGGGGCTGTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWVEGG*WGCGCD
Trigger: ATCGCAGCCACAGCCCCAGCAGCCACCCTCCACCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTRGMF*SPRARA
Trigger: AGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVTRGMF*SPRARA
Trigger: AGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGGTTCATCTCCAGCTaGTGGGGGAAGGCGGCATAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGFISS*WGKAAY
Trigger: GTATGCCGCCTTCCCCCAGCAGCTGGAGATGAACCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGCTGGGCTGGACAATaGGCTGAACAGCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGWAGQ*AEQQPG
Trigger: ACCAGGCTGCTGTTCAGCGCATTGTCCAGCCCAGCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGCTGGAGGACCAGCTaGTTTACTGGTCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGWRTS*FTGRLG
Trigger: GCCCAGCCGACCAGTAAAGCAGCTGGTCCTCCAGCC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTGGAGGGTGGCTGCTaGGGCTGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVEGGC*GCGCDD
Trigger: ATCATCGCAGCCACAGCCCCAGCAGCCACCCTCCAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTGGAGGGTGGCTGCTaGGGCTGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVEGGC*GCGCDD
Trigger: ATCATCGCAGCCACAGCCCCAGCAGCCACCCTCCAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTCGCCTTCCTCCTCTaGCCGAACGCTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLAFLL*PNAGQL
Trigger: GAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTCGCCTTCCTCCTCTaGCCGAACGCTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELAFLL*PNAGQL
Trigger: GAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTCGCCTTCCTCCTCTaGCCGAACGCTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELAFLL*PNAGQL
Trigger: GAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTTTGGCTCACCCCATaGCGGGCTGCCCCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVWLTP*RAAPLR
Trigger: TCTAAGAGGGGCAGCCCGCCATGGGGTGAGCCAAAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCCAGACTGGGGACCTaGGTAGCTGTCTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSRLGT*VAVSSG
Trigger: ACCCGAGGAGACAGCTACCCAGGTCCCCAGTCTGGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTGGTCGGCTCCTaGCCACCACCTCGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGLVGS*PPPRAL
Trigger: TAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCCCTCCAGCACTACTaGAGGAGACAGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVALQHY*RRQLWQ
Trigger: CTGCCACAGCTGTCTCCTCCAGTAGTGCTGGAGGGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCAGTGGGGGCCCTGTaGCCCCAGGGTTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESVGAL*PQGFQQ
Trigger: CTGCTGGAAACCCTGGGGCCACAGGGCCCCCACTGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCTGGAGGACCAGGGTaGTGCGTTTCGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVAGGPG*CVSIHP
Trigger: AGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCTGGAGGACCAGGGTaGTGCGTTTCGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAGGPG*CVSIHP
Trigger: AGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGGCATTCTTGGCTTaGGTCAGGGCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWAFLA*VRAASW
Trigger: CCAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGGGCATTCTTGGCTTaGGTCAGGGCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREWAFLA*VRAASW
Trigger: CCAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGTATGCGCCTGGGATaGGGCGTCCCCGTGAATCTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVCMRLG*GVPVNL
Trigger: AAGATTCACGGGGACGCCTCATCCCAGGCGCATACA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTCTGCCCAATTCGATaGCATCGTGCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLCPIR*HRAWAC
Trigger: GCAGGCCCAGGCACGATGTCATCGAATTGGGCAGAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCTGCCCAATTCGATaGCATCGTGCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLCPIR*HRAWAC
Trigger: GCAGGCCCAGGCACGATGTCATCGAATTGGGCAGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCAGGACCAGGAGGCTaGCACAATGCCAGCCGATCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSGPGG*HNASRS
Trigger: AGATCGGCTGGCATTGTGTCAGCCTCCTGGTCCTGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGGAGTAGAGCAGCGTaGCAAGGATGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVWSRAA*QGWSWC
Trigger: GCACCAGCTCCATCCTTGTCACGCTGCTCTACTCCA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTCATCCTCCAGTTTaGCTGGTGGAACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPHPPV*LVEHSG
Trigger: CCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGAAGGCCACTTCCCTaGGAGTACAGCCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRRPLP*EYSLAD
Trigger: GTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGGCTGCCGCTGTGCTaGCTGCAGATGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGLPLC*LQMLPP
Trigger: AGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCGGCGAAGTTTGGTaGACTGGGCTGCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELGEVW*TGLPLC
Trigger: GCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATCTTAGGGGCTGACTaGGGTGGCTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLILGAD*GGCPPA
Trigger: TGCTGGAGGGCAGCCACCTCAGTCAGCCCCTAAGAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATCTTAGGGGCTGACTaGGGTGGCTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTILGAD*GGCPPA
Trigger: TGCTGGAGGGCAGCCACCTCAGTCAGCCCCTAAGAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAACAATCTTAGGGGCTaGCTGAGGTGGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGNNLRG*LRWLPS
Trigger: GGAGGGCAGCCACCTCAGTCAGCCCCTAAGATTGTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGCTGGACAATGCGCTaGACAGCAGCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGWTMR*TAAWFP
Trigger: TGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGCTGGACAATGCGCTaGACAGCAGCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGWTMR*TAAWFP
Trigger: TGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMTRGMF*SPRARA
Trigger: AGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTRGMF*SPRARA
Trigger: AGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGATGACGGTCATGTCTaGGGGAGCGTGGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDDGHV*GSVAAH
Trigger: ATGAGCGGCCACGCTCCCGCAGACATGACCGTCATC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGATGACGGTCATGTCTaGGGGAGCGTGGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDDGHV*GSVAAH
Trigger: ATGAGCGGCCACGCTCCCGCAGACATGACCGTCATC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGATGACGGTCATGTCTaGGGGAGCGTGGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTDDGHV*GSVAAH
Trigger: ATGAGCGGCCACGCTCCCGCAGACATGACCGTCATC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTCATCTCCAGCTaGTGGGGGAAGGCGGCATAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGFISS*WGKAAY
Trigger: GTATGCCGCCTTCCCCCAGCAGCTGGAGATGAACCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGCCGCTGTGCTGACTaGAGATGCTTCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCRCAD*RCFLLC
Trigger: GCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCCCCACATCTCCCCTaGCCCTCCCACGTTTCCATA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSPHLP*PSHVSI
Trigger: TATGGAAACGTGGGAGGGGCAGGGGAGATGTGGGGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCCACCATTGGCTGTaGCTGCCACCAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFHHWL*LPPGAE
Trigger: CTCAGCCCCTGGTGGCAGGCACAGCCAATGGTGGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTCCACCATTGGCTGTaGCTGCCACCAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREFHHWL*LPPGAE
Trigger: CTCAGCCCCTGGTGGCAGGCACAGCCAATGGTGGAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGCTGGGCTGGACAATaGGCTGAACAGCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGWAGQ*AEQQPG
Trigger: ACCAGGCTGCTGTTCAGCGCATTGTCCAGCCCAGCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGAGGTCAGTGTAACTaGAGGCTTCAGTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRGQCN*RLQWGP
Trigger: GGGCCCCCACTGAAGCCTGCAGTTACACTGACCTCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACATGCCGATGTCCTTaGGGACCTCCAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVTCRCP*GPPDCG
Trigger: GCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACATGCCGATGTCCTTaGGGACCTCCAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTCRCP*GPPDCG
Trigger: GCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCCCTTGGGCATTCTTaGCTTGAGTCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVALGHS*LESGLP
Trigger: TGGCAGCCCTGACTCAAGCCAAGAATGCCCAAGGGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTGGAGGGTGGCTGCTaGGGCTGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVEGGC*GCGCDD
Trigger: ATCATCGCAGCCACAGCCCCAGCAGCCACCCTCCAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGAAGAGCCAGCCTGTaGCTGCAGTACCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGRASL*LQYHLD
Trigger: GTCAAGGTGGTACTGCAGCCACAGGCTGGCTCTTCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTTTGGCTCACCCCATaGCGGGCTGCCCCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVWLTP*RAAPLR
Trigger: TCTAAGAGGGGCAGCCCGCCATGGGGTGAGCCAAAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCCAGACTGGGGACCTaGGTAGCTGTCTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSRLGT*VAVSSG
Trigger: ACCCGAGGAGACAGCTACCCAGGTCCCCAGTCTGGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCCAGACTGGGGACCTaGGTAGCTGTCTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSRLGT*VAVSSG
Trigger: ACCCGAGGAGACAGCTACCCAGGTCCCCAGTCTGGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGGTTGGTCGGCTCCTaGCCACCACCTCGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGLVGS*PPPRAL
Trigger: TAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATAGTCTTGTGGGGTTaGTCGGCTCCTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIVLWG*SAPGHH
Trigger: GTGGTGGCCAGGAGCCGACCAACCCCACAAGACTAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATAGTCTTGTGGGGTTaGTCGGCTCCTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVIVLWG*SAPGHH
Trigger: GTGGTGGCCAGGAGCCGACCAACCCCACAAGACTAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCACCTCCTGGAGTCCTaGACTTCCCCACATCTCCCC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTHLLES*TSPHLP
Trigger: GGGGAGATGTGGGGAAGTCCAGGACTCCAGGAGGTG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGAGTCCAGAGAGCTTaGCAGTCCAAGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGVQRA*QSKGFL
Trigger: GAGGAAGCCCTTGGACTGCCAAGCTCTCTGGACTCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTCTGTAAGACAGGTTaGGCTGGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVCKTG*AGCSWL
Trigger: CAGCCAGGAGCAGCCAGCCCAACCTGTCTTACAGAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCCCTCCAGCACTACTaGAGGAGACAGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLALQHY*RRQLWQ
Trigger: CTGCCACAGCTGTCTCCTCCAGTAGTGCTGGAGGGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGCTGGAGGACCAGGGTaGTGCGTTTCGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEAGGPG*CVSIHP
Trigger: AGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGGCATTCTTGGCTTaGGTCAGGGCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWAFLA*VRAASW
Trigger: CCAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGGCTGTGGCTGCGATaGTGGTGGTTGTGGTACAAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGLWLR*WWLWYN
Trigger: ATTGTACCACAACCACCATCATCGCAGCCACAGCCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTGGTCCCATTATCTaGGCCTGCTGTACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPGPII*ACCTED
Trigger: GTCCTCTGTACAGCAGGCTCAGATAATGGGACCAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGACAGTGGGGCAATaGCCAAGAAGGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWTVGQ*PRRDHG
Trigger: TCCATGGTCCCTTCTTGGTCATTGCCCCACTGTCCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGGACAGTGGGGCAATaGCCAAGAAGGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVWTVGQ*PRRDHG
Trigger: TCCATGGTCCCTTCTTGGTCATTGCCCCACTGTCCA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGTATGCGCCTGGGATaGGGCGTCCCCGTGAATCTT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRECMRLG*GVPVNL
Trigger: AAGATTCACGGGGACGCCTCATCCCAGGCGCATACA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTATGCGCCTGGGATaGGGCGTCCCCGTGAATCTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCMRLG*GVPVNL
Trigger: AAGATTCACGGGGACGCCTCATCCCAGGCGCATACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAACCAGTTTGCCGGCTaGACGAACCATGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTNQFAG*TNHGLQ
Trigger: CTGCAGGCCATGGTTCGTTCAGCCGGCAAACTGGTT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAACCAGTTTGCCGGCTaGACGAACCATGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLNQFAG*TNHGLQ
Trigger: CTGCAGGCCATGGTTCGTTCAGCCGGCAAACTGGTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAACCAGTTTGCCGGCTaGACGAACCATGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRENQFAG*TNHGLQ
Trigger: CTGCAGGCCATGGTTCGTTCAGCCGGCAAACTGGTT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGAAGACAAAGCGGTCTaGGTCAGGCTTGCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVEDKAV*VRLAEA
Trigger: CGCTTCAGCAAGCCTGACTCAGACCGCTTTGTCTTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAAGACAAAGCGGTCTaGGTCAGGCTTGCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEDKAV*VRLAEA
Trigger: CGCTTCAGCAAGCCTGACTCAGACCGCTTTGTCTTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCTGCCCAATTCGATaGCATCGTGCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELCPIR*HRAWAC
Trigger: GCAGGCCCAGGCACGATGTCATCGAATTGGGCAGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTGCTTCACAACGCCGCCTTCGCCGGTCCCCACGTTCTGCAGCCTCTATCTCAATTTCTTTCAGCTTaGAGGCTGCTTCACAACGCC +
Preference number: 4 (lower is better)
Translates to: RLLHNAAFAGPHVLQPLSQFLSA*RLLHNA
Trigger: GGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTG...AGATAGAGGCTGCAGAACGTGGGGACCGGCGAAGGCGGCGTTGTGAAGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACGGTAGAGAGTCCGTaGGGCTCTCTCCTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTVESP*GSLLSD
Trigger: ATCACTGAGGAGAGAGCCTCACGGACTCTCTACCGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCAGGACCAGGAGGCTaGCACAATGCCAGCCGATCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSGPGG*HNASRS
Trigger: AGATCGGCTGGCATTGTGTCAGCCTCCTGGTCCTGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTCAGGACCAGGAGGCTaGCACAATGCCAGCCGATCT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESGPGG*HNASRS
Trigger: AGATCGGCTGGCATTGTGTCAGCCTCCTGGTCCTGA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGGAGTAGAGCAGCGTaGCAAGGATGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMWSRAA*QGWSWC
Trigger: GCACCAGCTCCATCCTTGTCACGCTGCTCTACTCCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGAGTAGAGCAGCGTaGCAAGGATGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWSRAA*QGWSWC
Trigger: GCACCAGCTCCATCCTTGTCACGCTGCTCTACTCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTGGAGTAGAGCAGCGTaGCAAGGATGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTWSRAA*QGWSWC
Trigger: GCACCAGCTCCATCCTTGTCACGCTGCTCTACTCCA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCTCATCCTCCAGTTTaGCTGGTGGAACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPHPPV*LVEHSG
Trigger: CCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTCATCCTCCAGTTTaGCTGGTGGAACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPHPPV*LVEHSG
Trigger: CCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCTCATCCTCCAGTTTaGCTGGTGGAACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPHPPV*LVEHSG
Trigger: CCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGAAGGCCACTTCCCTaGGAGTACAGCCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTRRPLP*EYSLAD
Trigger: GTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGAAGGCCACTTCCCTaGGAGTACAGCCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRRPLP*EYSLAD
Trigger: GTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTTTCCAGCAGGAGCTaGACCCTTAACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVSSRS*TLNWLE
Trigger: CTCCAGCCAGTTAAGGGTTCAGCTCCTGCTGGAAAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCCCTAGCACAACATaGCGATGTCCTTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLPSTT*RCPWGP
Trigger: AGGTCCCCAAGGACATCGGCATGTTGTGCTAGGGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACTACCTTGGCAGGCTaGCCTTGGGCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTTLAG*PWAFLA
Trigger: AGCCAAGAATGCCCAAGGGCAGCCTGCCAAGGTAGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTACCTTGGCAGGCTaGCCTTGGGCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVTTLAG*PWAFLA
Trigger: AGCCAAGAATGCCCAAGGGCAGCCTGCCAAGGTAGT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGGGTGGAGGGTGGCTaGTGGGGCTGTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTWVEGG*WGCGCD
Trigger: ATCGCAGCCACAGCCCCAGCAGCCACCCTCCACCCA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGAGCCAGCCTGTGGCTaGAGTACCACCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTEPACG*STTLTG
Trigger: ACCAGTCAAGGTGGTACTGCAGCCACAGGCTGGCTC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGAGCCAGCCTGTGGCTaGAGTACCACCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLEPACG*STTLTG
Trigger: ACCAGTCAAGGTGGTACTGCAGCCACAGGCTGGCTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGAGCCAGCCTGTGGCTaGAGTACCACCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREEPACG*STTLTG
Trigger: ACCAGTCAAGGTGGTACTGCAGCCACAGGCTGGCTC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAGCGTCAAACTTGTATaGGCCTGGGATGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSVKLV*AWDEAS
Trigger: GGACGCCTCATCCCAGGCGCATACAAGTTTGACGCT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGCGTCAAACTTGTATaGGCCTGGGATGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSVKLV*AWDEAS
Trigger: GGACGCCTCATCCCAGGCGCATACAAGTTTGACGCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCCGAAAGCAGTCAGTaGGCCCATAGGCATGATGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPESSQ*AHRHDD
Trigger: GTCATCATGCCTATGGGCGCACTGACTGCTTTCGGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGGTTCATCTCCAGCTaGTGGGGGAAGGCGGCATAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGFISS*WGKAAY
Trigger: GTATGCCGCCTTCCCCCAGCAGCTGGAGATGAACCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCAGTGGTGAGGCAGTaGGTGAGGTATACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAVVRQ*VRYTAG
Trigger: ACCAGCAGTATACCTCACGCACTGCCTCACCACTGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCAGTGGTGAGGCAGTaGGTGAGGTATACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVAVVRQ*VRYTAG
Trigger: ACCAGCAGTATACCTCACGCACTGCCTCACCACTGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTCACTCTCATCAGTaGTGGAGCTGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPHSHQ*WSWSWM
Trigger: CATCCAGCTCCAGCTCCAGCACTGATGAGAGTGAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCTCACTCTCATCAGTaGTGGAGCTGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPHSHQ*WSWSWM
Trigger: CATCCAGCTCCAGCTCCAGCACTGATGAGAGTGAGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGCCGCTGTGCTGACTaGAGATGCTTCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMCRCAD*RCFLLC
Trigger: GCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTGCCGCTGTGCTGACTaGAGATGCTTCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMECRCAD*RCFLLC
Trigger: GCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFGELG*RCADCR
Trigger: TCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCATCCTCCTCAGGTTaGAGTGGTGGCAACCGCAAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSSSSG*SGGNRK
Trigger: CTTGCGGTTGCCACCACTGCAACCTGAGGAGGATGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAAGCAATGGGGCCCATaGTGGGGCTTCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGKQWGP*WGFSHQ
Trigger: CTGATGACTGAAGCCCCAGCATGGGCCCCATTGCTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAAGCAATGGGGCCCATaGTGGGGCTTCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVKQWGP*WGFSHQ
Trigger: CTGATGACTGAAGCCCCAGCATGGGCCCCATTGCTT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCCCCACATCTCCCCTaGCCCTCCCACGTTTCCATA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSPHLP*PSHVSI
Trigger: TATGGAAACGTGGGAGGGGCAGGGGAGATGTGGGGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTCCCCACATCTCCCCTaGCCCTCCCACGTTTCCATA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESPHLP*PSHVSI
Trigger: TATGGAAACGTGGGAGGGGCAGGGGAGATGTGGGGA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTCCACCATTGGCTGTaGCTGCCACCAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFHHWL*LPPGAE
Trigger: CTCAGCCCCTGGTGGCAGGCACAGCCAATGGTGGAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACATGCCGATGTCCTTaGGGACCTCCAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTCRCP*GPPDCG
Trigger: GCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGTCAGGGCTGCCAGCTaGTTGCCCTGTAACACTATC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVVRAAS*LPCNTI
Trigger: GATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGAC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTCAGGGCTGCCAGCTaGTTGCCCTGTAACACTATC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVRAAS*LPCNTI
Trigger: GATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCCCTTGGGCATTCTTaGCTTGAGTCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLALGHS*LESGLP
Trigger: TGGCAGCCCTGACTCAAGCCAAGAATGCCCAAGGGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGCCCTTGGGCATTCTTaGCTTGAGTCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMALGHS*LESGLP
Trigger: TGGCAGCCCTGACTCAAGCCAAGAATGCCCAAGGGC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGGAAGAGCCAGCCTGTaGCTGCAGTACCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREGRASL*LQYHLD
Trigger: GTCAAGGTGGTACTGCAGCCACAGGCTGGCTCTTCC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGAAGAGCCAGCCTGTaGCTGCAGTACCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGRASL*LQYHLD
Trigger: GTCAAGGTGGTACTGCAGCCACAGGCTGGCTCTTCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGAAGAGCCAGCCTGTaGCTGCAGTACCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGRASL*LQYHLD
Trigger: GTCAAGGTGGTACTGCAGCCACAGGCTGGCTCTTCC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCACGGGCTCTCGCAATaGCCTCTGCTACAATCCGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHGLSQ*PLLQSD
Trigger: ATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPLAER*ATRPHL
Trigger: TAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATGTCTGCGGGAGCGTaGCCGCTCATCATCCTCACT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLMSAGA*PLIILT
Trigger: AGTGAGGATGATGAGCGGCCACGCTCCCGCAGACAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATGTCTGCGGGAGCGTaGCCGCTCATCATCCTCACT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTMSAGA*PLIILT
Trigger: AGTGAGGATGATGAGCGGCCACGCTCCCGCAGACAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGGQNK*PGCWVT
Trigger: GGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVRKRSQ*NCMVSG
Trigger: CCCTGACACCATGCAGTTCCATTGGGATCGCTTCCG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRKRSQ*NCMVSG
Trigger: CCCTGACACCATGCAGTTCCATTGGGATCGCTTCCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGAAGGCGGCATACTTaGCGGCACATGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGRRHT*RHMATK
Trigger: CTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGAAGGCGGCATACTTaGCGGCACATGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGRRHT*RHMATK
Trigger: CTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGGAAGGCGGCATACTTaGCGGCACATGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREGRRHT*RHMATK
Trigger: CTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAGGCTCCCACCATTTaGGCAATTCAGGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQAPTI*AIQDQE
Trigger: CTCCTGGTCCTGAATTGCCCAAATGGTGGGAGCCTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATGTTGCAGTCTGTTTaGCTCACCCCATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVMLQSV*LTPWRA
Trigger: AGCCCGCCATGGGGTGAGCCAAACAGACTGCAACAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCCAGACTGGGGACCTaGGTAGCTGTCTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESRLGT*VAVSSG
Trigger: ACCCGAGGAGACAGCTACCCAGGTCCCCAGTCTGGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATAGTCTTGTGGGGTTaGTCGGCTCCTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEIVLWG*SAPGHH
Trigger: GTGGTGGCCAGGAGCCGACCAACCCCACAAGACTAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATAGTCTTGTGGGGTTaGTCGGCTCCTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLIVLWG*SAPGHH
Trigger: GTGGTGGCCAGGAGCCGACCAACCCCACAAGACTAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCATCTCATAGTCTTGTaGGGTTGGTCGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVHLIVL*GWSAPG
Trigger: GCCAGGAGCCGACCAACCCCACAAGACTATGAGATG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCACTCTCATCAGTGCTaGAGCTGGAGCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHSHQC*SWSWMR
Trigger: CCTCATCCAGCTCCAGCTCCAGCACTGATGAGAGTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTGAGAGTACAGCCTaGCAGACGAGGTCAATACGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPESTA*QTRSIR
Trigger: CCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGAAGTTTGGTGAACTaGGCTGCCGCTGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRSLVN*AAAVLT
Trigger: AGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCATCTTAGAAAGGTCTaGTCGCATCCTACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHLRKV*SHPTGP
Trigger: CGGGCCCGTAGGATGCGACCAGACCTTTCTAAGATG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGGGGCTCTCAAGCCTaGATGGTGATGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRGSQA*MVMVVM
Trigger: CATCACCACCATCACCATCCAGGCTTGAGAGCCCCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCAGGTTGCAGTGGTaGCAACCGCAAGGTAGTACC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLRLQW*QPQGST
Trigger: GGTACTACCTTGCGGTTGCCACCACTGCAACCTGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTCAGGTTGCAGTGGTaGCAACCGCAAGGTAGTACC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLRLQW*QPQGST
Trigger: GGTACTACCTTGCGGTTGCCACCACTGCAACCTGAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCCTCAGGTTGCAGTaGTGGCAACCGCAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLLRLQ*WQPQGS
Trigger: ACTACCTTGCGGTTGCCACCACTGCAACCTGAGGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTCCTCAGGTTGCAGTaGTGGCAACCGCAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLLRLQ*WQPQGS
Trigger: ACTACCTTGCGGTTGCCACCACTGCAACCTGAGGAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAATGGGGCCCATGCTaGGGCTTCAGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQWGPC*GFSHQH
Trigger: ATGCTGATGACTGAAGCCCCAGCATGGGCCCCATTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGAGTCCAGAGAGCTTaGCAGTCCAAGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGVQRA*QSKGFL
Trigger: GAGGAAGCCCTTGGACTGCCAAGCTCTCTGGACTCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGGAGCTGTTTCCTCTaGTGGAGGGACCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGSCFL*WRDQFT
Trigger: AGTGAACTGGTCCCTCCACCAGAGGAAACAGCTCCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGGAGCTGTTTCCTCTaGTGGAGGGACCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGSCFL*WRDQFT
Trigger: AGTGAACTGGTCCCTCCACCAGAGGAAACAGCTCCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGGCTGCTCCTGGCTaGCAGGCTGAGTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLAAPG*QAEWYN
Trigger: ATTATACCACTCAGCCTGCCAGCCAGGAGCAGCCAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTCTGTAAGACAGGTTaGGCTGGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVCKTG*AGCSWL
Trigger: CAGCCAGGAGCAGCCAGCCCAACCTGTCTTACAGAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCCCTCCAGCACTACTaGAGGAGACAGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEALQHY*RRQLWQ
Trigger: CTGCCACAGCTGTCTCCTCCAGTAGTGCTGGAGGGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGTTCCCAGGGACCTTaGCGGCCAACACTGTATTAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGSQGP*RPTLYY
Trigger: GTAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCTTTACTGGTCGGCTaGGCTGGACAATGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGALLVG*AGQCAE
Trigger: TTCAGCGCATTGTCCAGCCCAGCCGACCAGTAAAGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGACCAGCTGCTTTACTaGTCGGCTGGGCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDQLLY*SAGLDN
Trigger: ATTGTCCAGCCCAGCCGACCAGTAAAGCAGCTGGTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTCAGTGGGGGCCCTGTaGCCCCAGGGTTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSVGAL*PQGFQQ
Trigger: CTGCTGGAAACCCTGGGGCCACAGGGCCCCCACTGA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCTGGAGGACCAGGGTaGTGCGTTTCGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEAGGPG*CVSIHP
Trigger: AGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGGGCTGTGGCTGCGATaGTGGTGGTTGTGGTACAAT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTGLWLR*WWLWYN
Trigger: ATTGTACCACAACCACCATCATCGCAGCCACAGCCC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGTGGCTGCGATaGTGGTGGTTGTGGTACAAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGLWLR*WWLWYN
Trigger: ATTGTACCACAACCACCATCATCGCAGCCACAGCCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCTGGTCCCATTATCTaGGCCTGCTGTACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPGPII*ACCTED
Trigger: GTCCTCTGTACAGCAGGCTCAGATAATGGGACCAGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTGGTCCCATTATCTaGGCCTGCTGTACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPGPII*ACCTED
Trigger: GTCCTCTGTACAGCAGGCTCAGATAATGGGACCAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGGACAGTGGGGCAATaGCCAAGAAGGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMWTVGQ*PRRDHG
Trigger: TCCATGGTCCCTTCTTGGTCATTGCCCCACTGTCCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGAAGACAAAGCGGTCTaGGTCAGGCTTGCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTEDKAV*VRLAEA
Trigger: CGCTTCAGCAAGCCTGACTCAGACCGCTTTGTCTTC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGAAGACAAAGCGGTCTaGGTCAGGCTTGCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEEDKAV*VRLAEA
Trigger: CGCTTCAGCAAGCCTGACTCAGACCGCTTTGTCTTC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ATCATCAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTCTCTGCCCAATTCGATaGCATCGTGCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: IIKGSPSSSWSFGGPWSGLCPIR*HRAWAC
Trigger: GCAGGCCCAGGCACGATGTCATCGAATTGGGCAGAG...ACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGACGGTAGAGAGTCCGTaGGGCTCTCTCCTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMETVESP*GSLLSD
Trigger: ATCACTGAGGAGAGAGCCTCACGGACTCTCTACCGT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGAGTAGAGCAGCGTaGCAAGGATGGAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWSRAA*QGWSWC
Trigger: GCACCAGCTCCATCCTTGTCACGCTGCTCTACTCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGCTGTCTCCTCGGGTaGCTTTTCAACAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSCLLG*LFNRSI
Trigger: GATGCTCCTGTTGAAAAGTCACCCGAGGAGACAGCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGAAGGCCACTTCCCTaGGAGTACAGCCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERRPLP*EYSLAD
Trigger: GTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAAGTGGCACTGCTGTaGCCCAAAGATGACACAGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEVALL*PKDDTD
Trigger: GTCTGTGTCATCTTTGGGTCACAGCAGTGCCACTTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCATCCTGGTTCATCTaGTCCAAGGAGTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPSWFI*SKESRE
Trigger: CTCTCTGGACTCCTTGGATCAGATGAACCAGGATGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAACAATCTTAGGGGCTaGCTGAGGTGGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNENNLRG*LRWLPS
Trigger: GGAGGGCAGCCACCTCAGTCAGCCCCTAAGATTGTT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCATCGAACAGATCCATaGTGGGGTCTGCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHRTDP*WGLPSW
Trigger: CCAAGATGGCAGACCCCATCATGGATCTGTTCGATG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTGATACCTTGGGCCTaGATTTGTGCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVIPWA*ICATWA
Trigger: TGCCCATGTGGCACAAATTCAGGCCCAAGGTATCAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCTGAGCTGTGCTGGTaGTACCTTGGGCCTGAATTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAELCW*YLGPEF
Trigger: AAATTCAGGCCCAAGGTATCACCAGCACAGCTCAGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCTGCCACCAGGGGCTaGGCTGTGCTGGTGATACCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPATRG*AVLVIP
Trigger: AGGTATCACCAGCACAGCTCAGCCCCTGGTGGCAGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTTTCCAGCAGGAGCTaGACCCTTAACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVSSRS*TLNWLE
Trigger: CTCCAGCCAGTTAAGGGTTCAGCTCCTGCTGGAAAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTTTCCAGCAGGAGCTaGACCCTTAACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVSSRS*TLNWLE
Trigger: CTCCAGCCAGTTAAGGGTTCAGCTCCTGCTGGAAAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCCCTAGCACAACATaGCGATGTCCTTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLPSTT*RCPWGP
Trigger: AGGTCCCCAAGGACATCGGCATGTTGTGCTAGGGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACTACCTTGGCAGGCTaGCCTTGGGCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTTLAG*PWAFLA
Trigger: AGCCAAGAATGCCCAAGGGCAGCCTGCCAAGGTAGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTACTACCTTGGCAGGCTaGCCTTGGGCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTTTLAG*PWAFLA
Trigger: AGCCAAGAATGCCCAAGGGCAGCCTGCCAAGGTAGT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGTGGCTGCTGCACCTaGAGCTGGATAGTTACTACC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVCGCCT*SWIVTT
Trigger: GGTAGTAACTATCCAGCTGCAGGTGCAGCAGCCACA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTGGCTGCTGCACCTaGAGCTGGATAGTTACTACC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCGCCT*SWIVTT
Trigger: GGTAGTAACTATCCAGCTGCAGGTGCAGCAGCCACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTTCTTCCAGGCACTTaGCTGCGGACGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVFLPGT*LRTIHP
Trigger: AGGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTTGAATCATCTGCCTaGTGGCCAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVESSA*WPDCHG
Trigger: ACCATGGCAGTCTGGCCAGCAGGCAGATGATTCAAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCCGAAAGCAGTCAGTaGGCCCATAGGCATGATGAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPESSQ*AHRHDD
Trigger: GTCATCATGCCTATGGGCGCACTGACTGCTTTCGGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCCGAAAGCAGTCAGTaGGCCCATAGGCATGATGAC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPESSQ*AHRHDD
Trigger: GTCATCATGCCTATGGGCGCACTGACTGCTTTCGGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCGGTCCCCACGTTCTaGAGCCTCTATCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPVPTF*SLYLHL
Trigger: CAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCGGTCCCCACGTTCTaGAGCCTCTATCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPVPTF*SLYLHL
Trigger: CAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTTCAGCTTGAAGGCTaGTTCACAACGCCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVFQLEG*FTTPPS
Trigger: CGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTTCAGCTTGAAGGCTaGTTCACAACGCCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFQLEG*FTTPPS
Trigger: CGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGAAGCTCCCCATCATaGCGAACAGGCTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRSSPS*RTGSHH
Trigger: ATGGTGGGAGCCTGTTCGGCATGATGGGGAGCTTCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAGAAGCTCCCCATCATaGCGAACAGGCTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRSSPS*RTGSHH
Trigger: ATGGTGGGAGCCTGTTCGGCATGATGGGGAGCTTCT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAAGGATGGAGCTGGTaGTCCTGCTTGATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQGWSW*SCLMVL
Trigger: CAGAACCATCAAGCAGGAGCACCAGCTCCATCCTTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEVYCW*SSGVEQ
Trigger: CTGCTCTACTCCACTGCTGCACCAGCAGTATACCTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTGCGTGAGGTATACTaGTGGTGCAGCAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVREVY*WCSSGV
Trigger: TACTCCACTGCTGCACCAGCAGTATACCTCACGCAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGCAGTGGTGAGGCAGTaGGTGAGGTATACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREAVVRQ*VRYTAG
Trigger: ACCAGCAGTATACCTCACGCACTGCCTCACCACTGC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCAGTGGTGAGGCAGTaGGTGAGGTATACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLAVVRQ*VRYTAG
Trigger: ACCAGCAGTATACCTCACGCACTGCCTCACCACTGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCTCACTCTCATCAGTaGTGGAGCTGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPHSHQ*WSWSWM
Trigger: CATCCAGCTCCAGCTCCAGCACTGATGAGAGTGAGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCTCACTCTCATCAGTaGTGGAGCTGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPHSHQ*WSWSWM
Trigger: CATCCAGCTCCAGCTCCAGCACTGATGAGAGTGAGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVCADCR*FLLCHG
Trigger: TCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCADCR*FLLCHG
Trigger: TCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGCCGCTGTGCTGACTaGAGATGCTTCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECRCAD*RCFLLC
Trigger: GCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFGELG*RCADCR
Trigger: TCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMFGELG*RCADCR
Trigger: TCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFGELG*RCADCR
Trigger: TCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTGCTGCTCTCTGGTaGAATAGGCCCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLAALW*NRPWQN
Trigger: GTTTTGCCAGGGCCTATTGCACCAGAGAGCAGCAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCAGTGCTTCCACCCTaGATGAGGGCCATCATCTTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPVLPP*MRAIIL
Trigger: TAAGATGATGGCCCTCATGCAGGGTGGAAGCACTGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGTGATGAAGCATGGTaGTGGAGTCTACATGAGGGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGDEAW*WSLHEG
Trigger: CCCCTCATGTAGACTCCAGCACCATGCTTCATCACC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGTGATGAAGCATGGTaGTGGAGTCTACATGAGGGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGDEAW*WSLHEG
Trigger: CCCCTCATGTAGACTCCAGCACCATGCTTCATCACC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCATCCTCCTCAGGTTaGAGTGGTGGCAACCGCAAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSSSSG*SGGNRK
Trigger: CTTGCGGTTGCCACCACTGCAACCTGAGGAGGATGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAAGCAATGGGGCCCATaGTGGGGCTTCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEKQWGP*WGFSHQ
Trigger: CTGATGACTGAAGCCCCAGCATGGGCCCCATTGCTT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAAGCAATGGGGCCCATaGTGGGGCTTCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLKQWGP*WGFSHQ
Trigger: CTGATGACTGAAGCCCCAGCATGGGCCCCATTGCTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCCCCACATCTCCCCTaGCCCTCCCACGTTTCCATA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESPHLP*PSHVSI
Trigger: TATGGAAACGTGGGAGGGGCAGGGGAGATGTGGGGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGTGAGCACACCAGCTaGTCTAGTCTCCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGEHTS*SSLLSF
Trigger: GAAGGAAAGGAGACTAGAGCAGCTGGTGTGCTCACC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTGGGCCTGAATTTGTaGCACATGGGCACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLGLNL*HMGTSD
Trigger: GTCACTGGTGCCCATGTGGCACAAATTCAGGCCCAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGCTGGAGGACCAGCTaGTTTACTGGTCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGWRTS*FTGRLG
Trigger: GCCCAGCCGACCAGTAAAGCAGCTGGTCCTCCAGCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGAGGTCAGTGTAACTaGAGGCTTCAGTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERGQCN*RLQWGP
Trigger: GGGCCCCCACTGAAGCCTGCAGTTACACTGACCTCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAACATGCCGATGTCCTTaGGGACCTCCAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNETCRCP*GPPDCG
Trigger: GCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTCAGGGCTGCCAGCTaGTTGCCCTGTAACACTATC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVRAAS*LPCNTI
Trigger: GATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCCCTTGGGCATTCTTaGCTTGAGTCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEALGHS*LESGLP
Trigger: TGGCAGCCCTGACTCAAGCCAAGAATGCCCAAGGGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTGGAGGGTGGCTGCTaGGGCTGTGGCTGCGATGAT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVEGGC*GCGCDD
Trigger: ATCATCGCAGCCACAGCCCCAGCAGCCACCCTCCAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGACAGAGTCACTGGCTaGGTGGAGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTDRVTG*VEGGCW
Trigger: CCAGCAGCCACCCTCCACCCAGCCAGTGACTCTGTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPEEAP*EEPACG
Trigger: GCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCACGGGCTCTCGCAATaGCCTCTGCTACAATCCGAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHGLSQ*PLLQSD
Trigger: ATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCACGGGCTCTCGCAATaGCCTCTGCTACAATCCGAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEHGLSQ*PLLQSD
Trigger: ATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPLAER*ATRPHL
Trigger: TAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTPLAER*ATRPHL
Trigger: TAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTCGCCTTCCTCCTCTaGCCGAACGCTGGGCAACTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLAFLL*PNAGQL
Trigger: GAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGGCTGAACGAACCATaGCCTGCAGGTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRLNEP*PAGESH
Trigger: ATGACTTTCACCTGCAGGCCATGGTTCGTTCAGCCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCGGCTGAACGAACCATaGCCTGCAGGTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVRLNEP*PAGESH
Trigger: ATGACTTTCACCTGCAGGCCATGGTTCGTTCAGCCG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATGTCTGCGGGAGCGTaGCCGCTCATCATCCTCACT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEMSAGA*PLIILT
Trigger: AGTGAGGATGATGAGCGGCCACGCTCCCGCAGACAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCCTTTGGGGGACCTTaGAGTGGTTTATATTCAGGA +
Preference number: 4 (lower is better)
Translates to: RAEPGGQNKWPGCWVTWASFGGP*SGLYSG
Trigger: TCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGA...AGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCACCCTCATCATCTTaGTCCTTTGGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSPSSS*SFGGPW
Trigger: CCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGCTGTTGGGTCACCTaGGCTTCATCTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGCWVT*ASSPSI
Trigger: GATTGATGGAGATGAAGCCCAGGTGACCCAACAGCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGGCTGTTGGGTCACCTaGGCTTCATCTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVGCWVT*ASSPSI
Trigger: GATTGATGGAGATGAAGCCCAGGTGACCCAACAGCC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVKWPGC*VTWASS
Trigger: AGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGKWPGC*VTWASS
Trigger: AGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTGGQNK*PGCWVT
Trigger: GGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRKRSQ*NCMVSG
Trigger: CCCTGACACCATGCAGTTCCATTGGGATCGCTTCCG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRKRSQ*NCMVSG
Trigger: CCCTGACACCATGCAGTTCCATTGGGATCGCTTCCG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCAGGCTCCCACCATTTaGGCAATTCAGGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREQAPTI*AIQDQE
Trigger: CTCCTGGTCCTGAATTGCCCAAATGGTGGGAGCCTG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCAGGCTCCCACCATTTaGGCAATTCAGGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLQAPTI*AIQDQE
Trigger: CTCCTGGTCCTGAATTGCCCAAATGGTGGGAGCCTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATGTTGCAGTCTGTTTaGCTCACCCCATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLMLQSV*LTPWRA
Trigger: AGCCCGCCATGGGGTGAGCCAAACAGACTGCAACAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATGTTGCAGTCTGTTTaGCTCACCCCATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEMLQSV*LTPWRA
Trigger: AGCCCGCCATGGGGTGAGCCAAACAGACTGCAACAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGTGAGGTATACTGCTaGTGCAGCAGTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGREVYC*CSSGVE
Trigger: CTCTACTCCACTGCTGCACCAGCAGTATACCTCACG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCGTGAGGTATACTGCTaGTGCAGCAGTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVREVYC*CSSGVE
Trigger: CTCTACTCCACTGCTGCACCAGCAGTATACCTCACG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCATCTCATAGTCTTGTaGGGTTGGTCGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTHLIVL*GWSAPG
Trigger: GCCAGGAGCCGACCAACCCCACAAGACTATGAGATG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCATCTCATAGTCTTGTaGGGTTGGTCGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHLIVL*GWSAPG
Trigger: GCCAGGAGCCGACCAACCCCACAAGACTATGAGATG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCATCTCATAGTCTTGTaGGGTTGGTCGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREHLIVL*GWSAPG
Trigger: GCCAGGAGCCGACCAACCCCACAAGACTATGAGATG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTCCAGTTTGACTGGTaGAACACTCCGGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLQFDW*NTPGNQ
Trigger: CTGGTTTCCCGGAGTGTTCCACCAGTCAAACTGGAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCACTCTCATCAGTGCTaGAGCTGGAGCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHSHQC*SWSWMR
Trigger: CCTCATCCAGCTCCAGCTCCAGCACTGATGAGAGTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCACTCTCATCAGTGCTaGAGCTGGAGCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTHSHQC*SWSWMR
Trigger: CCTCATCCAGCTCCAGCTCCAGCACTGATGAGAGTG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCAGGACACGATCCTTaGGCCACTCAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSGHDP*ATQRLF
Trigger: AAAGAGCCTCTGAGTGGCCCAAGGATCGTGTCCTGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCTGAGAGTACAGCCTaGCAGACGAGGTCAATACGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPESTA*QTRSIR
Trigger: CCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTGAGAGTACAGCCTaGCAGACGAGGTCAATACGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPESTA*QTRSIR
Trigger: CCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTGTTACCATTTCCTaGCTCCTACGGCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPVTIS*LLRLEG
Trigger: GCCTTCTAGCCGTAGGAGCCAGGAAATGGTAACAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCGTGGTGTGGGGACTaGAGAGTCACCATATTCTCC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSWCGD*RVTIFS
Trigger: GGAGAATATGGTGACTCTCCAGTCCCCACACCACGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGCACTACTACTTCGTaGTGTGGGGACTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCTTTS*CGDWRV
Trigger: GACTCTCCAGTCCCCACACCACGAAGTAGTAGTGCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCGAAGTTTGGTGAACTaGGCTGCCGCTGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERSLVN*AAAVLT
Trigger: AGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCGAAGTTTGGTGAACTaGGCTGCCGCTGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRSLVN*AAAVLT
Trigger: AGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGGTGCAATAGGCCCTaGCAAAACCCGGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVWCNRP*QNPVEH
Trigger: GTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGTGCAATAGGCCCTaGCAAAACCCGGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWCNRP*QNPVEH
Trigger: GTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLLAAL*CNRPWQ
Trigger: TTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLLAAL*CNRPWQ
Trigger: TTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCATCTTAGAAAGGTCTaGTCGCATCCTACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMHLRKV*SHPTGP
Trigger: CGGGCCCGTAGGATGCGACCAGACCTTTCTAAGATG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCATCTTAGAAAGGTCTaGTCGCATCCTACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHLRKV*SHPTGP
Trigger: CGGGCCCGTAGGATGCGACCAGACCTTTCTAAGATG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCATCTTAGAAAGGTCTaGTCGCATCCTACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREHLRKV*SHPTGP
Trigger: CGGGCCCGTAGGATGCGACCAGACCTTTCTAAGATG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAGGGGCTCTCAAGCCTaGATGGTGATGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERGSQA*MVMVVM
Trigger: CATCACCACCATCACCATCCAGGCTTGAGAGCCCCT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGGGGCTCTCAAGCCTaGATGGTGATGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRGSQA*MVMVVM
Trigger: CATCACCACCATCACCATCCAGGCTTGAGAGCCCCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAGGGGCTCTCAAGCCTaGATGGTGATGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMERGSQA*MVMVVM
Trigger: CATCACCACCATCACCATCCAGGCTTGAGAGCCCCT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCAGGTTGCAGTGGTaGCAACCGCAAGGTAGTACC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLRLQW*QPQGST
Trigger: GGTACTACCTTGCGGTTGCCACCACTGCAACCTGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTCCTCAGGTTGCAGTaGTGGCAACCGCAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLLRLQ*WQPQGS
Trigger: ACTACCTTGCGGTTGCCACCACTGCAACCTGAGGAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCCTCAGGTTGCAGTaGTGGCAACCGCAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLLRLQ*WQPQGS
Trigger: ACTACCTTGCGGTTGCCACCACTGCAACCTGAGGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCAATGGGGCCCATGCTaGGGCTTCAGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMQWGPC*GFSHQH
Trigger: ATGCTGATGACTGAAGCCCCAGCATGGGCCCCATTG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCAATGGGGCCCATGCTaGGGCTTCAGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLQWGPC*GFSHQH
Trigger: ATGCTGATGACTGAAGCCCCAGCATGGGCCCCATTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCAATGGGGCCCATGCTaGGGCTTCAGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEQWGPC*GFSHQH
Trigger: ATGCTGATGACTGAAGCCCCAGCATGGGCCCCATTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTCCTTTTCACCTCCTaGAGTCCTGGACTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFLFTS*SPGLPH
Trigger: GTGGGGAAGTCCAGGACTCCAGGAGGTGAAAAGGAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTCCTTTTCACCTCCTaGAGTCCTGGACTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVFLFTS*SPGLPH
Trigger: GTGGGGAAGTCCAGGACTCCAGGAGGTGAAAAGGAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGCTGTTTCCTCTGGTaGAGGGACCAGTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSCFLW*RDQFTC
Trigger: GCAAGTGAACTGGTCCCTCCACCAGAGGAAACAGCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGCTGTTTCCTCTaGTGGAGGGACCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGSCFL*WRDQFT
Trigger: AGTGAACTGGTCCCTCCACCAGAGGAAACAGCTCCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTGGCTGCTCCTGGCTaGCAGGCTGAGTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLAAPG*QAEWYN
Trigger: ATTATACCACTCAGCCTGCCAGCCAGGAGCAGCCAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGTTCCCAGGGACCTTaGCGGCCAACACTGTATTAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGSQGP*RPTLYY
Trigger: GTAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGACCAGCTGCTTTACTaGTCGGCTGGGCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDQLLY*SAGLDN
Trigger: ATTGTCCAGCCCAGCCGACCAGTAAAGCAGCTGGTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGGGCATTCTTGGCTTaGGTCAGGGCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTWAFLA*VRAASW
Trigger: CCAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCTGGTCCCATTATCTaGGCCTGCTGTACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPGPII*ACCTED
Trigger: GTCCTCTGTACAGCAGGCTCAGATAATGGGACCAGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTCATCTTCTCGAGGTaGCTGTGCAGGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFIFSR*LCRHDF
Trigger: GAAGTCATGCCTGCACAGTCACCTCGAGAAGATGAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGACGATTCACCCTTTTaGGTTCTGGGTGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVDDSPF*VLGALT
Trigger: AGTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGACAGTGGGGCAATaGCCAAGAAGGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWTVGQ*PRRDHG
Trigger: TCCATGGTCCCTTCTTGGTCATTGCCCCACTGTCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGATGAGGCGTCCCCGTaGATCTTTGCAGTACATTTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDEASP*IFAVHF
Trigger: GAAATGTACTGCAAAGATTCACGGGGACGCCTCATC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCAATGGTGTTCCTGTaGGTAGCACCTTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVAMVFL*VAPCVP
Trigger: TGGAACACAAGGTGCTACTCACAGGAACACCATTGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCAATGGTGTTCCTGTaGGTAGCACCTTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAMVFL*VAPCVP
Trigger: TGGAACACAAGGTGCTACTCACAGGAACACCATTGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTAGGCATGTTGGTATaGCCTGCCCCTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLGMLV*PAPLER
Trigger: CCTTTCCAAAGGGGCAGGTCATACCAACATGCCTAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAAGACAAAGCGGTCTaGGTCAGGCTTGCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEDKAV*VRLAEA
Trigger: CGCTTCAGCAAGCCTGACTCAGACCGCTTTGTCTTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGACCACTCATGGATTaGAGCACAGCCTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRPLMD*STALSN
Trigger: GTTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVGTSS*STTGNH
Trigger: ATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAACGGTAGAGAGTCCGTaGGGCTCTCTCCTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNETVESP*GSLLSD
Trigger: ATCACTGAGGAGAGAGCCTCACGGACTCTCTACCGT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGCTGTCTCCTCGGGTaGCTTTTCAACAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSCLLG*LFNRSI
Trigger: GATGCTCCTGTTGAAAAGTCACCCGAGGAGACAGCT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRSTSR*LGSSMH
Trigger: GTGCATGGAAGAGCCTAATCACCTTGATGTGGACCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGGCAAAACCCGGTTaGACACCGTTTCAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLAKPG*TPFQCD
Trigger: ATCACACTGAAACGGTGTTCAACCGGGTTTTGCCAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGAAGTGGCACTGCTGTaGCCCAAAGATGACACAGAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLEVALL*PKDDTD
Trigger: GTCTGTGTCATCTTTGGGTCACAGCAGTGCCACTTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAAGTGGCACTGCTGTaGCCCAAAGATGACACAGAC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMEVALL*PKDDTD
Trigger: GTCTGTGTCATCTTTGGGTCACAGCAGTGCCACTTC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTCTACATGAGGGGATaGTGGTGCACCACCCATCAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVYMRG*WCTTHH
Trigger: GTGATGGGTGGTGCACCATCATCCCCTCATGTAGAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTGCTGGAGTCTACATaGGGGGATGATGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVLEST*GDDGAP
Trigger: TGGTGCACCATCATCCCCTCATGTAGACTCCAGCAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGAAGGTAACAGTTCCTaGCCCTCCAGCTGTATCCAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEEGNSS*PSSCIH
Trigger: GTGGATACAGCTGGAGGGTCAGGAACTGTTACCTTC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGAAGGTAACAGTTCCTaGCCCTCCAGCTGTATCCAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTEGNSS*PSSCIH
Trigger: GTGGATACAGCTGGAGGGTCAGGAACTGTTACCTTC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCATCCTGGTTCATCTaGTCCAAGGAGTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPSWFI*SKESRE
Trigger: CTCTCTGGACTCCTTGGATCAGATGAACCAGGATGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCATCTTAGGGGCTGACTaGGGTGGCTGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTILGAD*GGCPPA
Trigger: TGCTGGAGGGCAGCCACCTCAGTCAGCCCCTAAGAT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTGATACCTTGGGCCTaGATTTGTGCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVIPWA*ICATWA
Trigger: TGCCCATGTGGCACAAATTCAGGCCCAAGGTATCAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCTGAGCTGTGCTGGTaGTACCTTGGGCCTGAATTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLAELCW*YLGPEF
Trigger: AAATTCAGGCCCAAGGTATCACCAGCACAGCTCAGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGCTGAGCTGTGCTGGTaGTACCTTGGGCCTGAATTT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMAELCW*YLGPEF
Trigger: AAATTCAGGCCCAAGGTATCACCAGCACAGCTCAGC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGCTGGACAATGCGCTaGACAGCAGCCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGWTMR*TAAWFP
Trigger: TGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCCCTAGCACAACATaGCGATGTCCTTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELPSTT*RCPWGP
Trigger: AGGTCCCCAAGGACATCGGCATGTTGTGCTAGGGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGTGGCTGCTGCACCTaGAGCTGGATAGTTACTACC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRECGCCT*SWIVTT
Trigger: GGTAGTAACTATCCAGCTGCAGGTGCAGCAGCCACA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTGGCTGCTGCACCTaGAGCTGGATAGTTACTACC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCGCCT*SWIVTT
Trigger: GGTAGTAACTATCCAGCTGCAGGTGCAGCAGCCACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTTTGCTGTGGCTGCTaGACCTGCAGCTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVFCCGC*TCSWIV
Trigger: AACTATCCAGCTGCAGGTGCAGCAGCCACAGCAAAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTTRGMF*SPRARA
Trigger: AGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAGCACTCTTCTTCCTaGGTTTCTTCTCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQHSSS*VSSRLP
Trigger: AGGAAGGCGAGAAGAAACGCAGGAAGAAGAGTGCTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCAGCACTCTTCTTCCTaGGTTTCTTCTCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVQHSSS*VSSRLP
Trigger: AGGAAGGCGAGAAGAAACGCAGGAAGAAGAGTGCTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCGCCATCTGGTTCTTaGACTGGTTCAGGGAGGATA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSPSGS*TGSGRI
Trigger: TATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTCCAGGCACTTGCCTaGGGACGATTCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFQALA*GRFTLL
Trigger: CAAAAGGGTGAATCGTCCGCAGGCAAGTGCCTGGAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCCAGGCACTTGCCTaGGGACGATTCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFQALA*GRFTLL
Trigger: CAAAAGGGTGAATCGTCCGCAGGCAAGTGCCTGGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTCCAGGCACTTGCCTaGGGACGATTCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFQALA*GRFTLL
Trigger: CAAAAGGGTGAATCGTCCGCAGGCAAGTGCCTGGAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTTCTTCCAGGCACTTaGCTGCGGACGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFLPGT*LRTIHP
Trigger: AGGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTTCTTCCAGGCACTTaGCTGCGGACGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFLPGT*LRTIHP
Trigger: AGGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTTCTTCCAGGCACTTaGCTGCGGACGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREFLPGT*LRTIHP
Trigger: AGGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGTTGAATCATCTGCCTaGTGGCCAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMVESSA*WPDCHG
Trigger: ACCATGGCAGTCTGGCCAGCAGGCAGATGATTCAAC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTTGAATCATCTGCCTaGTGGCCAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVESSA*WPDCHG
Trigger: ACCATGGCAGTCTGGCCAGCAGGCAGATGATTCAAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTTGAATCATCTGCCTaGTGGCCAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEVESSA*WPDCHG
Trigger: ACCATGGCAGTCTGGCCAGCAGGCAGATGATTCAAC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAATTCGATGACATCGTaGCTGGGCCTGCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVNSMTS*LGLQVI
Trigger: AATGACCTGCAGGCCCAGGCACGATGTCATCGAATT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCCGAAAGCAGTCAGTaGGCCCATAGGCATGATGAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPESSQ*AHRHDD
Trigger: GTCATCATGCCTATGGGCGCACTGACTGCTTTCGGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCGGTCCCCACGTTCTaGAGCCTCTATCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPVPTF*SLYLHL
Trigger: CAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCGGTCCCCACGTTCTaGAGCCTCTATCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPVPTF*SLYLHL
Trigger: CAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCGGTCCCCACGTTCTaGAGCCTCTATCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPVPTF*SLYLHL
Trigger: CAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTAGTCGAGCAAAAGTaGGGAAGCGATCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLVEQK*GSDPNG
Trigger: TCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTAGTCGAGCAAAAGTaGGGAAGCGATCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLVEQK*GSDPNG
Trigger: TCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAGGAGGCTGACACAATaGCAGCCGATCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVRRLTQ*QPIFQK
Trigger: CTTTTGGAAGATCGGCTGGCATTGTGTCAGCCTCCT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGAAGCTCCCCATCATaGCGAACAGGCTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERSSPS*RTGSHH
Trigger: ATGGTGGGAGCCTGTTCGGCATGATGGGGAGCTTCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCAAGGATGGAGCTGGTaGTCCTGCTTGATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLQGWSW*SCLMVL
Trigger: CAGAACCATCAAGCAGGAGCACCAGCTCCATCCTTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCAAGGATGGAGCTGGTaGTCCTGCTTGATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMQGWSW*SCLMVL
Trigger: CAGAACCATCAAGCAGGAGCACCAGCTCCATCCTTG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTEVYCW*SSGVEQ
Trigger: CTGCTCTACTCCACTGCTGCACCAGCAGTATACCTC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLEVYCW*SSGVEQ
Trigger: CTGCTCTACTCCACTGCTGCACCAGCAGTATACCTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREEVYCW*SSGVEQ
Trigger: CTGCTCTACTCCACTGCTGCACCAGCAGTATACCTC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTGCGTGAGGTATACTaGTGGTGCAGCAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVREVY*WCSSGV
Trigger: TACTCCACTGCTGCACCAGCAGTATACCTCACGCAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGTGCGTGAGGTATACTaGTGGTGCAGCAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMVREVY*WCSSGV
Trigger: TACTCCACTGCTGCACCAGCAGTATACCTCACGCAC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCAGTGGTGAGGCAGTaGGTGAGGTATACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEAVVRQ*VRYTAG
Trigger: ACCAGCAGTATACCTCACGCACTGCCTCACCACTGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGGCCACCACCTCGTaGTCTAGCTTTAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLATTS*SSFKVR
Trigger: TCTGACTTTAAAGCTAGAGCACGAGGTGGTGGCCAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCTCACTCTCATCAGTaGTGGAGCTGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPHSHQ*WSWSWM
Trigger: CATCCAGCTCCAGCTCCAGCACTGATGAGAGTGAGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTCTAGCAAGTGGTTaGCTGGCCCCAAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCLASG*LAPKFL
Trigger: GAGGAATTTTGGGGCCAGGCAACCACTTGCTAGACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLCHGS*TTTSWC
Trigger: ACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCADCR*FLLCHG
Trigger: TCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRECADCR*FLLCHG
Trigger: TCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMCADCR*FLLCHG
Trigger: TCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFGELG*RCADCR
Trigger: TCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTTGCTGCTCTCTGGTaGAATAGGCCCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELAALW*NRPWQN
Trigger: GTTTTGCCAGGGCCTATTGCACCAGAGAGCAGCAAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTGCTGCTCTCTGGTaGAATAGGCCCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLAALW*NRPWQN
Trigger: GTTTTGCCAGGGCCTATTGCACCAGAGAGCAGCAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCAGTGCTTCCACCCTaGATGAGGGCCATCATCTTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPVLPP*MRAIIL
Trigger: TAAGATGATGGCCCTCATGCAGGGTGGAAGCACTGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCAGTGCTTCCACCCTaGATGAGGGCCATCATCTTA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPVLPP*MRAIIL
Trigger: TAAGATGATGGCCCTCATGCAGGGTGGAAGCACTGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGGTGATGAAGCATGGTaGTGGAGTCTACATGAGGGG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTGDEAW*WSLHEG
Trigger: CCCCTCATGTAGACTCCAGCACCATGCTTCATCACC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGTGATGAAGCATGGTaGTGGAGTCTACATGAGGGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGDEAW*WSLHEG
Trigger: CCCCTCATGTAGACTCCAGCACCATGCTTCATCACC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAAGCAATGGGGCCCATaGTGGGGCTTCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEKQWGP*WGFSHQ
Trigger: CTGATGACTGAAGCCCCAGCATGGGCCCCATTGCTT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTCCACCATTGGCTGTaGCTGCCACCAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTFHHWL*LPPGAE
Trigger: CTCAGCCCCTGGTGGCAGGCACAGCCAATGGTGGAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGCTGGGCTGGACAATaGGCTGAACAGCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGWAGQ*AEQQPG
Trigger: ACCAGGCTGCTGTTCAGCGCATTGTCCAGCCCAGCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTCTTCAGAGGAAGATaGTGGAACTCCTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVFRGR*WNSCSG
Trigger: GCCACTGCAGGAGTTCCACCATCTTCCTCTGAAGAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430710.8
ENST00000557364.6
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCAGACTGTGGCTGCTaGAGGACCAGGGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPDCGC*RTRVMR
Trigger: ACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTCAGGGCTGCCAGCTaGTTGCCCTGTAACACTATC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVRAAS*LPCNTI
Trigger: GATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACACGGGCTCTCGCAATaGCCTCTGCTACAATCCGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEHGLSQ*PLLQSD
Trigger: ATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPLAER*ATRPHL
Trigger: TAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIWFLH*FREDRL
Trigger: GAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCAAAGTCTCGCCATCTaGTTCTTGCACTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVQSLAI*FLHWFR
Trigger: CCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCGGCTGAACGAACCATaGCCTGCAGGTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERLNEP*PAGESH
Trigger: ATGACTTTCACCTGCAGGCCATGGTTCGTTCAGCCG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCGGCTGAACGAACCATaGCCTGCAGGTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRLNEP*PAGESH
Trigger: ATGACTTTCACCTGCAGGCCATGGTTCGTTCAGCCG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAATGGCCCGACAAATaGTCTCCACATCTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEWPDK*SPHLVQ
Trigger: CTGAACGAGATGTGGAGACCATTTGTCGGGCCATTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGACAGTACACGAGAATaGCCCGACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDSTRE*PDKWSP
Trigger: TGGAGACCATTTGTCGGGCCATTCTCGTGTACTGTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGACAGTACACGAGAATaGCCCGACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVDSTRE*PDKWSP
Trigger: TGGAGACCATTTGTCGGGCCATTCTCGTGTACTGTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCACCCTCATCATCTTaGTCCTTTGGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSPSSS*SFGGPW
Trigger: CCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCACCCTCATCATCTTaGTCCTTTGGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSPSSS*SFGGPW
Trigger: CCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCACCCTCATCATCTTaGTCCTTTGGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSPSSS*SFGGPW
Trigger: CCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGCTGTTGGGTCACCTaGGCTTCATCTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGCWVT*ASSPSI
Trigger: GATTGATGGAGATGAAGCCCAGGTGACCCAACAGCC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGCTGTTGGGTCACCTaGGCTTCATCTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGCWVT*ASSPSI
Trigger: GATTGATGGAGATGAAGCCCAGGTGACCCAACAGCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGGCTGTTGGGTCACCTaGGCTTCATCTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREGCWVT*ASSPSI
Trigger: GATTGATGGAGATGAAGCCCAGGTGACCCAACAGCC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLKWPGC*VTWASS
Trigger: AGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTKWPGC*VTWASS
Trigger: AGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGGQNK*PGCWVT
Trigger: GGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERKRSQ*NCMVSG
Trigger: CCCTGACACCATGCAGTTCCATTGGGATCGCTTCCG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATACTTGGCGGCACATaGCCACAAAGCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGILGGT*PQSHGS
Trigger: ACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATGTTGCAGTCTGTTTaGCTCACCCCATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEMLQSV*LTPWRA
Trigger: AGCCCGCCATGGGGTGAGCCAAACAGACTGCAACAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCGTGAGGTATACTGCTaGTGCAGCAGTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTREVYC*CSSGVE
Trigger: CTCTACTCCACTGCTGCACCAGCAGTATACCTCACG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCCAGTTTGACTGGTaGAACACTCCGGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLQFDW*NTPGNQ
Trigger: CTGGTTTCCCGGAGTGTTCCACCAGTCAAACTGGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCAGGACACGATCCTTaGGCCACTCAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSGHDP*ATQRLF
Trigger: AAAGAGCCTCTGAGTGGCCCAAGGATCGTGTCCTGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCTGAGAGTACAGCCTaGCAGACGAGGTCAATACGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPESTA*QTRSIR
Trigger: CCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCTGTTACCATTTCCTaGCTCCTACGGCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPVTIS*LLRLEG
Trigger: GCCTTCTAGCCGTAGGAGCCAGGAAATGGTAACAGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCCTGTTACCATTTCCTaGCTCCTACGGCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTPVTIS*LLRLEG
Trigger: GCCTTCTAGCCGTAGGAGCCAGGAAATGGTAACAGG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGACTGTCTAGCAAGTaGTTGCCTGGCCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGLSSK*LPGPKI
Trigger: AATTTTGGGGCCAGGCAACCACTTGCTAGACAGTCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCGTGGTGTGGGGACTaGAGAGTCACCATATTCTCC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSWCGD*RVTIFS
Trigger: GGAGAATATGGTGACTCTCCAGTCCCCACACCACGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCGTGGTGTGGGGACTaGAGAGTCACCATATTCTCC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSWCGD*RVTIFS
Trigger: GGAGAATATGGTGACTCTCCAGTCCCCACACCACGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTCGTGGTGTGGGGACTaGAGAGTCACCATATTCTCC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESWCGD*RVTIFS
Trigger: GGAGAATATGGTGACTCTCCAGTCCCCACACCACGA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTACTACTTCGTGGTGTaGGGACTGGAGAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGYYFVV*GLESHH
Trigger: ATGGTGACTCTCCAGTCCCCACACCACGAAGTAGTA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGCACTACTACTTCGTaGTGTGGGGACTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRECTTTS*CGDWRV
Trigger: GACTCTCCAGTCCCCACACCACGAAGTAGTAGTGCA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTTCCTCCTCTGCCATaGAAGCTGCACTACTACTTC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLPPLP*KLHYYF
Trigger: GAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTCCTCCTCTGCCATaGAAGCTGCACTACTACTTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLPPLP*KLHYYF
Trigger: GAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGAAGTTTGGTGAACTaGGCTGCCGCTGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERSLVN*AAAVLT
Trigger: AGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGTGCAATAGGCCCTaGCAAAACCCGGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWCNRP*QNPVEH
Trigger: GTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTGGTGCAATAGGCCCTaGCAAAACCCGGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTWCNRP*QNPVEH
Trigger: GTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLLAAL*CNRPWQ
Trigger: TTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELLAAL*CNRPWQ
Trigger: TTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLLAAL*CNRPWQ
Trigger: TTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCAAAGATGCAGAAGTaGCACTGCTGTGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAKMQK*HCCDPK
Trigger: CTTTGGGTCACAGCAGTGCCACTTCTGCATCTTTGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGATGAAGCATGGTGCTaGAGTCTACATGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDEAWC*SLHEGM
Trigger: CATCCCCTCATGTAGACTCCAGCACCATGCTTCATC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGATGAAGCATGGTGCTaGAGTCTACATGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVDEAWC*SLHEGM
Trigger: CATCCCCTCATGTAGACTCCAGCACCATGCTTCATC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGTGGTGATGAAGCATaGTGCTGGAGTCTACATGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGGDEA*CWSLHE
Trigger: CTCATGTAGACTCCAGCACCATGCTTCATCACCACC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGGGGCTCTCAAGCCTaGATGGTGATGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERGSQA*MVMVVM
Trigger: CATCACCACCATCACCATCCAGGCTTGAGAGCCCCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCAGGTTGCAGTGGTaGCAACCGCAAGGTAGTACC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELRLQW*QPQGST
Trigger: GGTACTACCTTGCGGTTGCCACCACTGCAACCTGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCATTTCAGAGGAAGATGGTaGAACTCCTGCTCATACTGC +
Preference number: 4 (lower is better)
Translates to: QSPEARINGLAVGSPGLHFRGRW*NSCSYC
Trigger: GCAGTATGAGCAGGAGTTCCACCATCTTCCTCTGAA...ATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGCTGTTTCCTCTGGTaGAGGGACCAGTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSCFLW*RDQFTC
Trigger: GCAAGTGAACTGGTCCCTCCACCAGAGGAAACAGCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAGCTGTTTCCTCTGGTaGAGGGACCAGTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESCFLW*RDQFTC
Trigger: GCAAGTGAACTGGTCCCTCCACCAGAGGAAACAGCT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGCTCAGGATCTCCTaGCTCTTGGAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWLRIS*LLETCK
Trigger: TTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATGAAAGGATTCCCTTaGCTCAGGATCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGMKGFP*LRISWL
Trigger: GAGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATGAAAGGATTCCCTTaGCTCAGGATCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVMKGFP*LRISWL
Trigger: GAGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCCCTCCAGCACTACTaGAGGAGACAGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTALQHY*RRQLWQ
Trigger: CTGCCACAGCTGTCTCCTCCAGTAGTGCTGGAGGGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGGGTCTGCCATCTTaGGAAAGTAATGGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWGLPS*ESNGGY
Trigger: GTACCCTCCATTACTTTCCCAAGATGGCAGACCCCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGTTCCCAGGGACCTTaGCGGCCAACACTGTATTAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGSQGP*RPTLYY
Trigger: GTAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGACCAGCTGCTTTACTaGTCGGCTGGGCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEDQLLY*SAGLDN
Trigger: ATTGTCCAGCCCAGCCGACCAGTAAAGCAGCTGGTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAACCCTTAACTGGCTaGAGGACCAGCTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEPLTG*RTSCFT
Trigger: AGTAAAGCAGCTGGTCCTCCAGCCAGTTAAGGGTTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGAACCCTTAACTGGCTaGAGGACCAGCTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVEPLTG*RTSCFT
Trigger: AGTAAAGCAGCTGGTCCTCCAGCCAGTTAAGGGTTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTCCTGTGCAAGTCCTaGTACTTCCTTTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELLCKS*YFLSRQ
Trigger: CTGCCTGGAAAGGAAGTACCAGGACTTGCACAGGAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTCCTGTGCAAGTCCTaGTACTTCCTTTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLLCKS*YFLSRQ
Trigger: CTGCCTGGAAAGGAAGTACCAGGACTTGCACAGGAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCTGGAGGACCAGGGTaGTGCGTTTCGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTAGGPG*CVSIHP
Trigger: AGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCTGCAGTACCACCTTaGCTGGTACTGAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAAVPP*LVLKVF
Trigger: AAAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCTGCAGTACCACCTTaGCTGGTACTGAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVAAVPP*LVLKVF
Trigger: AAAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTCATCTTCTCGAGGTaGCTGTGCAGGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFIFSR*LCRHDF
Trigger: GAAGTCATGCCTGCACAGTCACCTCGAGAAGATGAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCATCTTCTCGAGGTaGCTGTGCAGGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFIFSR*LCRHDF
Trigger: GAAGTCATGCCTGCACAGTCACCTCGAGAAGATGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTCATCTTCTCGAGGTaGCTGTGCAGGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFIFSR*LCRHDF
Trigger: GAAGTCATGCCTGCACAGTCACCTCGAGAAGATGAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTTAACTTGGCGGTTTaGGCGTCTCTTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLNLAV*ASLLNA
Trigger: AGCATTCAGAAGAGACGCTCAAACCGCCAAGTTAAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGACGATTCACCCTTTTaGGTTCTGGGTGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDDSPF*VLGALT
Trigger: AGTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGACGATTCACCCTTTTaGGTTCTGGGTGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREDDSPF*VLGALT
Trigger: AGTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGATGAGGCGTCCCCGTaGATCTTTGCAGTACATTTC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDEASP*IFAVHF
Trigger: GAAATGTACTGCAAAGATTCACGGGGACGCCTCATC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGATGAGGCGTCCCCGTaGATCTTTGCAGTACATTTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDEASP*IFAVHF
Trigger: GAAATGTACTGCAAAGATTCACGGGGACGCCTCATC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGTATGCGCCTGGGATaGGGCGTCCCCGTGAATCTT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTCMRLG*GVPVNL
Trigger: AAGATTCACGGGGACGCCTCATCCCAGGCGCATACA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGCAATGGTGTTCCTGTaGGTAGCACCTTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEAMVFL*VAPCVP
Trigger: TGGAACACAAGGTGCTACTCACAGGAACACCATTGC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATGGCCTGTAGCTTTTaGACCTGTTCCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGMACSF*TCSSVL
Trigger: CAAGACAGAGGAACAGGTTCAAAAGCTACAGGCCAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATGGCCTGTAGCTTTTaGACCTGTTCCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVMACSF*TCSSVL
Trigger: CAAGACAGAGGAACAGGTTCAAAAGCTACAGGCCAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTTAGGCATGTTGGTATaGCCTGCCCCTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLGMLV*PAPLER
Trigger: CCTTTCCAAAGGGGCAGGTCATACCAACATGCCTAA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTAGGCATGTTGGTATaGCCTGCCCCTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELGMLV*PAPLER
Trigger: CCTTTCCAAAGGGGCAGGTCATACCAACATGCCTAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCGACCACTCATGGATTaGAGCACAGCCTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMERPLMD*STALSN
Trigger: GTTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCGACCACTCATGGATTaGAGCACAGCCTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRPLMD*STALSN
Trigger: GTTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCGACCACTCATGGATTaGAGCACAGCCTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERPLMD*STALSN
Trigger: GTTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCATCATCTTCCTCCATaGTGGCTGCATATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHHLPP*WLHMLL
Trigger: AAGGAGCATATGCAGCCATCATGGAGGAAGATGATG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREVGTSS*STTGNH
Trigger: ATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAAC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVGTSS*STTGNH
Trigger: ATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEVGTSS*STTGNH
Trigger: ATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAAC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAATTTCTTTCAGCTTaGAGGCTGCTTCACAACGCC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQFLSA*RLLHNA
Trigger: GGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCAATTTCTTTCAGCTTaGAGGCTGCTTCACAACGCC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVQFLSA*RLLHNA
Trigger: GGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRSTSR*LGSSMH
Trigger: GTGCATGGAAGAGCCTAATCACCTTGATGTGGACCT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRSTSR*LGSSMH
Trigger: GTGCATGGAAGAGCCTAATCACCTTGATGTGGACCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMERSTSR*LGSSMH
Trigger: GTGCATGGAAGAGCCTAATCACCTTGATGTGGACCT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACAGCAAACTCTGGATaGCCCTGTAACCACATCTCC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTANSG*PCNHIS
Trigger: GGAGATGTGGTTACAGGGTCATCCAGAGTTTGCTGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTGGCAAAACCCGGTTaGACACCGTTTCAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLAKPG*TPFQCD
Trigger: ATCACACTGAAACGGTGTTCAACCGGGTTTTGCCAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAAGTGGCACTGCTGTaGCCCAAAGATGACACAGAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEVALL*PKDDTD
Trigger: GTCTGTGTCATCTTTGGGTCACAGCAGTGCCACTTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATCTTCACTGGAGTCTaGGTTAGCTGGCATCATAGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVIFTGV*VSWHHR
Trigger: CCTATGATGCCAGCTAACTCAGACTCCAGTGAAGAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCTTCACTGGAGTCTaGGTTAGCTGGCATCATAGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIFTGV*VSWHHR
Trigger: CCTATGATGCCAGCTAACTCAGACTCCAGTGAAGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAAGGGCCAGAGTAAATaGAAATACAGCAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTKGQSK*KYSSRP
Trigger: TGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCTT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAAGGGCCAGAGTAAATaGAAATACAGCAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMKGQSK*KYSSRP
Trigger: TGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCTT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAAGGTAACAGTTCCTaGCCCTCCAGCTGTATCCAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEGNSS*PSSCIH
Trigger: GTGGATACAGCTGGAGGGTCAGGAACTGTTACCTTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCATCCTGGTTCATCTaGTCCAAGGAGTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPSWFI*SKESRE
Trigger: CTCTCTGGACTCCTTGGATCAGATGAACCAGGATGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGACTTGCAAAAGTCCTaGTGTTGGCGTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDLQKS*CWRRCL
Trigger: CAGACATCGACGCCAACATCAGGACTTTTGCAAGTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGACTTGCAAAAGTCCTaGTGTTGGCGTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDLQKS*CWRRCL
Trigger: CAGACATCGACGCCAACATCAGGACTTTTGCAAGTC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAACAATCTTAGGGGCTaGCTGAGGTGGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTNNLRG*LRWLPS
Trigger: GGAGGGCAGCCACCTCAGTCAGCCCCTAAGATTGTT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACATCGAACAGATCCATaGTGGGGTCTGCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEHRTDP*WGLPSW
Trigger: CCAAGATGGCAGACCCCATCATGGATCTGTTCGATG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGTGGCTGCTGCACCTaGAGCTGGATAGTTACTACC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECGCCT*SWIVTT
Trigger: GGTAGTAACTATCCAGCTGCAGGTGCAGCAGCCACA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTTTGCTGTGGCTGCTaGACCTGCAGCTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFCCGC*TCSWIV
Trigger: AACTATCCAGCTGCAGGTGCAGCAGCCACAGCAAAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGAGCCAGCCTGTGGCTaGAGTACCACCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTEPACG*STTLTG
Trigger: ACCAGTCAAGGTGGTACTGCAGCCACAGGCTGGCTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTCTGGTGTTCCAATCTaGGGTTTTCCTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSGVPI*GFPPFL
Trigger: CAGGAATGGAGGAAAACCGCAGATTGGAACACCAGA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCTGGTGTTCCAATCTaGGGTTTTCCTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSGVPI*GFPPFL
Trigger: CAGGAATGGAGGAAAACCGCAGATTGGAACACCAGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCAGCACTCTTCTTCCTaGGTTTCTTCTCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREQHSSS*VSSRLP
Trigger: AGGAAGGCGAGAAGAAACGCAGGAAGAAGAGTGCTG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCGCCATCTGGTTCTTaGACTGGTTCAGGGAGGATA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSPSGS*TGSGRI
Trigger: TATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTCGCCATCTGGTTCTTaGACTGGTTCAGGGAGGATA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESPSGS*TGSGRI
Trigger: TATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTTTAGCTCCCATGTaGTATCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLLAPM*YPHRAE
Trigger: CTCTGCCCTATGAGGATAGCACATGGGAGCTAAAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTCCAGGCACTTGCCTaGGGACGATTCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFQALA*GRFTLL
Trigger: CAAAAGGGTGAATCGTCCGCAGGCAAGTGCCTGGAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTCTTCCAGGCACTTaGCTGCGGACGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFLPGT*LRTIHP
Trigger: AGGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTTGAATCATCTGCCTaGTGGCCAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVESSA*WPDCHG
Trigger: ACCATGGCAGTCTGGCCAGCAGGCAGATGATTCAAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTTCCAGGTCCATGTaGTTGAGACTATCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCSRSM*LRLSSS
Trigger: GCTGCTTGATAGTCTCAAGCACATGGACCTGGAACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAATTCGATGACATCGTaGCTGGGCCTGCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLNSMTS*LGLQVI
Trigger: AATGACCTGCAGGCCCAGGCACGATGTCATCGAATT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAATTCGATGACATCGTaGCTGGGCCTGCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMNSMTS*LGLQVI
Trigger: AATGACCTGCAGGCCCAGGCACGATGTCATCGAATT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCATATACCAGGAGATaGTTTTCCACCCGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPYTRR*FSTRKQ
Trigger: CTGCTTTCGGGTGGAAAAGCATCTCCTGGTATATGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCATATACCAGGAGATaGTTTTCCACCCGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPYTRR*FSTRKQ
Trigger: CTGCTTTCGGGTGGAAAAGCATCTCCTGGTATATGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCTTCGCCGGTCCCCACGTTCTGCAGCCTCTATCTTCATTTGTTCTCTCTTGTTTTCAGCTTGAAGGCTaGTTCACAACGCCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: AFAGPHVLQPLSSFVLSCFQLEG*FTTPPS
Trigger: CGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAA...ACAAGAGAGAACAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGGCGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTCAGCTTGAAGGCTaGTTCACAACGCCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFQLEG*FTTPPS
Trigger: CGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGATCCCAATGGAACTaGATGGTGTCAGGGTCATAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRSQWN*MVSGSY
Trigger: ATATGACCCTGACACCATGCAGTTCCATTGGGATCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTAGTCGAGCAAAAGTaGGGAAGCGATCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLVEQK*GSDPNG
Trigger: TCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTAGTCGAGCAAAAGTaGGGAAGCGATCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELVEQK*GSDPNG
Trigger: TCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTAGTCGAGCAAAAGTaGGGAAGCGATCCCAATGGA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELVEQK*GSDPNG
Trigger: TCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAGGAGGCTGACACAATaGCAGCCGATCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRRLTQ*QPIFQK
Trigger: CTTTTGGAAGATCGGCTGGCATTGTGTCAGCCTCCT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGGAGGCTGACACAATaGCAGCCGATCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRRLTQ*QPIFQK
Trigger: CTTTTGGAAGATCGGCTGGCATTGTGTCAGCCTCCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAGAAGTCTGGGTCCTaGATGATGTTGCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEKSGS*MMLQSV
Trigger: AACAGACTGCAACATCATGCAGGACCCAGACTTCTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGAGAAGTCTGGGTCCTaGATGATGTTGCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVEKSGS*MMLQSV
Trigger: AACAGACTGCAACATCATGCAGGACCCAGACTTCTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEVYCW*SSGVEQ
Trigger: CTGCTCTACTCCACTGCTGCACCAGCAGTATACCTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTGCGTGAGGTATACTaGTGGTGCAGCAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVREVY*WCSSGV
Trigger: TACTCCACTGCTGCACCAGCAGTATACCTCACGCAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTGGCCACCACCTCGTaGTCTAGCTTTAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLATTS*SSFKVR
Trigger: TCTGACTTTAAAGCTAGAGCACGAGGTGGTGGCCAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTGGCCACCACCTCGTaGTCTAGCTTTAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELATTS*SSFKVR
Trigger: TCTGACTTTAAAGCTAGAGCACGAGGTGGTGGCCAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGCTCTTTGTCTTTCCTaGAGTAGCAGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREALCLS*SSRSSG
Trigger: CCCTGAGCTTCTGCTACTGCAGGAAAGACAAAGAGC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCTCTTTGTCTTTCCTaGAGTAGCAGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLALCLS*SSRSSG
Trigger: CCCTGAGCTTCTGCTACTGCAGGAAAGACAAAGAGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGCTCTTTGTCTTTCCTaGAGTAGCAGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEALCLS*SSRSSG
Trigger: CCCTGAGCTTCTGCTACTGCAGGAAAGACAAAGAGC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGTCTAGCAAGTGGTTaGCTGGCCCCAAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMCLASG*LAPKFL
Trigger: GAGGAATTTTGGGGCCAGGCAACCACTTGCTAGACA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTCTAGCAAGTGGTTaGCTGGCCCCAAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCLASG*LAPKFL
Trigger: GAGGAATTTTGGGGCCAGGCAACCACTTGCTAGACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELCHGS*TTTSWC
Trigger: ACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLCHGS*TTTSWC
Trigger: ACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELCHGS*TTTSWC
Trigger: ACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLCHGS*TTTSWC
Trigger: ACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTTGCTGCTCTCTGGTaGAATAGGCCCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELAALW*NRPWQN
Trigger: GTTTTGCCAGGGCCTATTGCACCAGAGAGCAGCAAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCAGTGCTTCCACCCTaGATGAGGGCCATCATCTTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPVLPP*MRAIIL
Trigger: TAAGATGATGGCCCTCATGCAGGGTGGAAGCACTGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATGCAGAAGTGGCACTaGTGTGACCCAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVMQKWH*CDPKMT
Trigger: TGTCATCTTTGGGTCACAGCAGTGCCACTTCTGCAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATGCAGAAGTGGCACTaGTGTGACCCAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGMQKWH*CDPKMT
Trigger: TGTCATCTTTGGGTCACAGCAGTGCCACTTCTGCAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGCTCTTGGAGACTTaGAAAAGTCCTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWLLET*KSPDVG
Trigger: GCCAACATCAGGACTTTTGCAAGTCTCCAAGAGCCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGAGGTCAGTGTAACTaGAGGCTTCAGTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRGQCN*RLQWGP
Trigger: GGGCCCCCACTGAAGCCTGCAGTTACACTGACCTCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTCTTCAGAGGAAGATaGTGGAACTCCTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVFRGR*WNSCSG
Trigger: GCCACTGCAGGAGTTCCACCATCTTCCTCTGAAGAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430710.8
ENST00000557364.6
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTCATGGAGCAAGATaGCTACGTCTTCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLHGAR*LRLQRK
Trigger: CTTCCTCTGAAGACGTAGCCATCTTGCTCCATGAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCACATGCCGATGTCCTTaGGGACCTCCAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTTCRCP*GPPDCG
Trigger: GCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCCCTTGGGCATTCTTaGCTTGAGTCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTALGHS*LESGLP
Trigger: TGGCAGCCCTGACTCAAGCCAAGAATGCCCAAGGGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGCTGCACCTGCAGCTaGATAGTTACTACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMCCTCS*IVTTLA
Trigger: TGCCAAGGTAGTAACTATCCAGCTGCAGGTGCAGCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGCTGCACCTGCAGCTaGATAGTTACTACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCCTCS*IVTTLA
Trigger: TGCCAAGGTAGTAACTATCCAGCTGCAGGTGCAGCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTGCTGCACCTGCAGCTaGATAGTTACTACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMECCTCS*IVTTLA
Trigger: TGCCAAGGTAGTAACTATCCAGCTGCAGGTGCAGCA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGAAGAGCCAGCCTGTaGCTGCAGTACCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGRASL*LQYHLD
Trigger: GTCAAGGTGGTACTGCAGCCACAGGCTGGCTCTTCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLIWFLH*FREDRL
Trigger: GAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREIWFLH*FREDRL
Trigger: GAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTIWFLH*FREDRL
Trigger: GAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCAAAGTCTCGCCATCTaGTTCTTGCACTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEQSLAI*FLHWFR
Trigger: CCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCACAAAGAACTGCATaGAAGGCAAAGTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPQRTA*KAKSRH
Trigger: ATGGCGAGACTTTGCCTTCCATGCAGTTCTTTGTGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCACAAAGAACTGCATaGAAGGCAAAGTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPQRTA*KAKSRH
Trigger: ATGGCGAGACTTTGCCTTCCATGCAGTTCTTTGTGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGTAATTGTGGACAGTaGGGCAATGACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSNCGQ*GNDQEG
Trigger: CCCTTCTTGGTCATTGCCCCACTGTCCACAATTACT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGGCTGAACGAACCATaGCCTGCAGGTGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERLNEP*PAGESH
Trigger: ATGACTTTCACCTGCAGGCCATGGTTCGTTCAGCCG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAATGGCCCGACAAATaGTCTCCACATCTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMEWPDK*SPHLVQ
Trigger: CTGAACGAGATGTGGAGACCATTTGTCGGGCCATTC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGAATGGCCCGACAAATaGTCTCCACATCTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEEWPDK*SPHLVQ
Trigger: CTGAACGAGATGTGGAGACCATTTGTCGGGCCATTC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGACAGTACACGAGAATaGCCCGACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDSTRE*PDKWSP
Trigger: TGGAGACCATTTGTCGGGCCATTCTCGTGTACTGTC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGACAGTACACGAGAATaGCCCGACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDSTRE*PDKWSP
Trigger: TGGAGACCATTTGTCGGGCCATTCTCGTGTACTGTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIILVL*GTLEWF
Trigger: AAACCACTCCAAGGTCCCCCAAAGGACCAAGATGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVIILVL*GTLEWF
Trigger: AAACCACTCCAAGGTCCCCCAAAGGACCAAGATGAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATACTTGGCGGCACATaGCCACAAAGCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEILGGT*PQSHGS
Trigger: ACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATACTTGGCGGCACATaGCCACAAAGCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLILGGT*PQSHGS
Trigger: ACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGATACTTGGCGGCACATaGCCACAAAGCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREILGGT*PQSHGS
Trigger: ACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTAT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGATACTTGGCGGCACATaGCCACAAAGCCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMILGGT*PQSHGS
Trigger: ACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTAT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGTGAGGTATACTGCTaGTGCAGCAGTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEREVYC*CSSGVE
Trigger: CTCTACTCCACTGCTGCACCAGCAGTATACCTCACG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCCAGTTTGACTGGTaGAACACTCCGGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELQFDW*NTPGNQ
Trigger: CTGGTTTCCCGGAGTGTTCCACCAGTCAAACTGGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATCCTCCAGTTTGACTaGTGGAACACTCCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEILQFD*WNTPGN
Trigger: GTTTCCCGGAGTGTTCCACCAGTCAAACTGGAGGAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGCTTTGAGCGGGACTaGTCAGTTAGCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSFERD*SVSFSS
Trigger: GGAAGAGAAGCTAACTGACCAGTCCCGCTCAAAGCT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGCTTTGAGCGGGACTaGTCAGTTAGCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSFERD*SVSFSS
Trigger: GGAAGAGAAGCTAACTGACCAGTCCCGCTCAAAGCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTTGGGAATCCATCTTaGGACATAGTGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFGNPS*DIVRDR
Trigger: CCTGTCCCTCACTATGTCCCAAGATGGATTCCCAAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCAGGACACGATCCTTaGGCCACTCAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESGHDP*ATQRLF
Trigger: AAAGAGCCTCTGAGTGGCCCAAGGATCGTGTCCTGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCTGTTACCATTTCCTaGCTCCTACGGCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPVTIS*LLRLEG
Trigger: GCCTTCTAGCCGTAGGAGCCAGGAAATGGTAACAGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGACTGTCTAGCAAGTaGTTGCCTGGCCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGLSSK*LPGPKI
Trigger: AATTTTGGGGCCAGGCAACCACTTGCTAGACAGTCC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGACTGTCTAGCAAGTaGTTGCCTGGCCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGLSSK*LPGPKI
Trigger: AATTTTGGGGCCAGGCAACCACTTGCTAGACAGTCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGACTGTCTAGCAAGTaGTTGCCTGGCCCCAAAATT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGLSSK*LPGPKI
Trigger: AATTTTGGGGCCAGGCAACCACTTGCTAGACAGTCC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTACTACTTCGTGGTGTaGGGACTGGAGAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMYYFVV*GLESHH
Trigger: ATGGTGACTCTCCAGTCCCCACACCACGAAGTAGTA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTACTACTTCGTGGTGTaGGGACTGGAGAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEYYFVV*GLESHH
Trigger: ATGGTGACTCTCCAGTCCCCACACCACGAAGTAGTA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGCACTACTACTTCGTaGTGTGGGGACTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECTTTS*CGDWRV
Trigger: GACTCTCCAGTCCCCACACCACGAAGTAGTAGTGCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTCCTCCTCTGCCATaGAAGCTGCACTACTACTTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLPPLP*KLHYYF
Trigger: GAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTTCCTCCTCTGCCATaGAAGCTGCACTACTACTTC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELPPLP*KLHYYF
Trigger: GAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGTGCAATAGGCCCTaGCAAAACCCGGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWCNRP*QNPVEH
Trigger: GTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGCAAAGATGCAGAAGTaGCACTGCTGTGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREAKMQK*HCCDPK
Trigger: CTTTGGGTCACAGCAGTGCCACTTCTGCATCTTTGC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGCAAAGATGCAGAAGTaGCACTGCTGTGACCCAAAG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTAKMQK*HCCDPK
Trigger: CTTTGGGTCACAGCAGTGCCACTTCTGCATCTTTGC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGATGAAGCATGGTGCTaGAGTCTACATGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDEAWC*SLHEGM
Trigger: CATCCCCTCATGTAGACTCCAGCACCATGCTTCATC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGATGAAGCATGGTGCTaGAGTCTACATGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEDEAWC*SLHEGM
Trigger: CATCCCCTCATGTAGACTCCAGCACCATGCTTCATC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGTGGTGATGAAGCATaGTGCTGGAGTCTACATGAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGGDEA*CWSLHE
Trigger: CTCATGTAGACTCCAGCACCATGCTTCATCACCACC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGTGGTGATGAAGCATaGTGCTGGAGTCTACATGAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGGDEA*CWSLHE
Trigger: CTCATGTAGACTCCAGCACCATGCTTCATCACCACC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTCTTCAGAGGAAGATaGTGGAACTCCTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVFRGR*WNSCSY
Trigger: GTATGAGCAGGAGTTCCACCATCTTCCTCTGAAGAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643469.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGAGTCCAGAGAGCTTaGCAGTCCAAGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGVQRA*QSKGFL
Trigger: GAGGAAGCCCTTGGACTGCCAAGCTCTCTGGACTCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTTGGAAAGTTCTGTaGGAGCTGTTTCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLWKVL*ELFPLV
Trigger: CACCAGAGGAAACAGCTCCCACAGAACTTTCCAAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTTTGGAAAGTTCTGTaGGAGCTGTTTCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLWKVL*ELFPLV
Trigger: CACCAGAGGAAACAGCTCCCACAGAACTTTCCAAAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAGCTGTGGATTCTTTaGAAAGTTCTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGELWIL*KVLWEL
Trigger: CAGCTCCCACAGAACTTTCCAAAGAATCCACAGCTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGAGCTGTGGATTCTTTaGAAAGTTCTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVELWIL*KVLWEL
Trigger: CAGCTCCCACAGAACTTTCCAAAGAATCCACAGCTC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAAGGTTATGGATTCTaGAGCTGGAGCTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQGYGF*SWSCGF
Trigger: GAATCCACAGCTCCAGCTCCAGAATCCATAACCTTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTCTGTAAGACAGGTTaGGCTGGCTGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVCKTG*AGCSWL
Trigger: CAGCCAGGAGCAGCCAGCCCAACCTGTCTTACAGAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGCTCAGGATCTCCTaGCTCTTGGAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWLRIS*LLETCK
Trigger: TTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTGGCTCAGGATCTCCTaGCTCTTGGAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEWLRIS*LLETCK
Trigger: TTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGGGTCTGCCATCTTaGGAAAGTAATGGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWGLPS*ESNGGY
Trigger: GTACCCTCCATTACTTTCCCAAGATGGCAGACCCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGGGGTCTGCCATCTTaGGAAAGTAATGGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMWGLPS*ESNGGY
Trigger: GTACCCTCCATTACTTTCCCAAGATGGCAGACCCCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCGTTTCGATTCACCCTaGGTAGGTGTAGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRFDSP*VGVEVS
Trigger: ACTGACCTCTACACCTACCCAGGGTGAATCGAAACG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCGTTTCGATTCACCCTaGGTAGGTGTAGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRFDSP*VGVEVS
Trigger: ACTGACCTCTACACCTACCCAGGGTGAATCGAAACG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
3UTR CAA 72 bp GCAGCGACTTGTCAGCCTCACTGTCCCACCAAGTTGTaGGAACCTCCAGTTGATCCACTACTGGGAACCATA +
Preference number: 4 (lower is better)
Translates to: AATCQPHCPTKL*EPPVDPLLGTI
Trigger: TATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCTGACAAGTCGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CAA 72 bp TCGCCGGTCCCCACGTTCTGCAGCCTCTATCTTCATTaGTTCTCTCTTGTAGCTGCGCTGATACGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: SPVPTFCSLYLH*FSLVAALIRCY
Trigger: GTAACAGCGTATCAGCGCAGCTACAAGAGAGAACAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGGCTGTGGCTGCGATaGTGGTGGTTGTGGTACAAT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGLWLR*WWLWYN
Trigger: ATTGTACCACAACCACCATCATCGCAGCCACAGCCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCTGGTCCCATTATCTaGGCCTGCTGTACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPGPII*ACCTED
Trigger: GTCCTCTGTACAGCAGGCTCAGATAATGGGACCAGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGCTGCAGTACCACCTTaGCTGGTACTGAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREAAVPP*LVLKVF
Trigger: AAAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTTAACTTGGCGGTTTaGGCGTCTCTTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLNLAV*ASLLNA
Trigger: AGCATTCAGAAGAGACGCTCAAACCGCCAAGTTAAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTAACTTGGCGGTTTaGGCGTCTCTTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLNLAV*ASLLNA
Trigger: AGCATTCAGAAGAGACGCTCAAACCGCCAAGTTAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCTGGGTGCCTTGACTaGATCCGTTTAAATTCTCGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSGCLD*IRLNSR
Trigger: TCGAGAATTTAAACGGATTCAGTCAAGGCACCCAGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTCTGGGTGCCTTGACTaGATCCGTTTAAATTCTCGA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSGCLD*IRLNSR
Trigger: TCGAGAATTTAAACGGATTCAGTCAAGGCACCCAGA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGACGATTCACCCTTTTaGGTTCTGGGTGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEDDSPF*VLGALT
Trigger: AGTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGGACAGTGGGGCAATaGCCAAGAAGGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTWTVGQ*PRRDHG
Trigger: TCCATGGTCCCTTCTTGGTCATTGCCCCACTGTCCA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGATGAGGCGTCCCCGTaGATCTTTGCAGTACATTTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEDEASP*IFAVHF
Trigger: GAAATGTACTGCAAAGATTCACGGGGACGCCTCATC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCAATGGTGTTCCTGTaGGTAGCACCTTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEAMVFL*VAPCVP
Trigger: TGGAACACAAGGTGCTACTCACAGGAACACCATTGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGATCCCCAAAGTCCTTaGGAAACTCTGATTCTGAGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEDPQSP*ETLILR
Trigger: CCTCAGAATCAGAGTTTCTCAAGGACTTTGGGGATC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGATCCCCAAAGTCCTTaGGAAACTCTGATTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDPQSP*ETLILR
Trigger: CCTCAGAATCAGAGTTTCTCAAGGACTTTGGGGATC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGATCCCCAAAGTCCTTaGGAAACTCTGATTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDPQSP*ETLILR
Trigger: CCTCAGAATCAGAGTTTCTCAAGGACTTTGGGGATC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATGGCCTGTAGCTTTTaGACCTGTTCCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEMACSF*TCSSVL
Trigger: CAAGACAGAGGAACAGGTTCAAAAGCTACAGGCCAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATGGCCTGTAGCTTTTaGACCTGTTCCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTMACSF*TCSSVL
Trigger: CAAGACAGAGGAACAGGTTCAAAAGCTACAGGCCAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTAGGCATGTTGGTATaGCCTGCCCCTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELGMLV*PAPLER
Trigger: CCTTTCCAAAGGGGCAGGTCATACCAACATGCCTAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCATCATCTTCCTCCATaGTGGCTGCATATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREHHLPP*WLHMLL
Trigger: AAGGAGCATATGCAGCCATCATGGAGGAAGATGATG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGCTTGAAGCGTCCATaGGATAAAATATCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRLKRP*DKISRH
Trigger: ATGGCGAGATATTTTATCTCATGGACGCTTCAAGCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAGTCATACGTCGCTTaGAGCGTCCATGAGATAAAA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQSYVA*SVHEIK
Trigger: TTTTATCTCATGGACGCTTCAAGCGACGTATGACTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GGGCAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTAGTACCTTGTTACACTaGTGTTTCAAGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: GQSPEARINGLAVGSPGLSTLLH*CFKCFL
Trigger: TAAGAAGCACTTGAAACATCAGTGTAACAAGGTACT...AAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCAATTTCTTTCAGCTTaGAGGCTGCTTCACAACGCC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTQFLSA*RLLHNA
Trigger: GGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCAATTTCTTTCAGCTTaGAGGCTGCTTCACAACGCC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLQFLSA*RLLHNA
Trigger: GGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERSTSR*LGSSMH
Trigger: GTGCATGGAAGAGCCTAATCACCTTGATGTGGACCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAACAGCAAACTCTGGATaGCCCTGTAACCACATCTCC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNETANSG*PCNHIS
Trigger: GGAGATGTGGTTACAGGGTCATCCAGAGTTTGCTGT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTGGCAAAACCCGGTTaGACACCGTTTCAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELAKPG*TPFQCD
Trigger: ATCACACTGAAACGGTGTTCAACCGGGTTTTGCCAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATCTTCACTGGAGTCTaGGTTAGCTGGCATCATAGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLIFTGV*VSWHHR
Trigger: CCTATGATGCCAGCTAACTCAGACTCCAGTGAAGAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATCTTCACTGGAGTCTaGGTTAGCTGGCATCATAGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEIFTGV*VSWHHR
Trigger: CCTATGATGCCAGCTAACTCAGACTCCAGTGAAGAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAAGGGCCAGAGTAAATaGAAATACAGCAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEKGQSK*KYSSRP
Trigger: TGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCTT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCATGTCAGATTGTCCTaGCCTTCATGGAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHVRLS*PSWSKM
Trigger: CATCTTGCTCCATGAAGGTCAGGACAATCTGACATG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCATGTCAGATTGTCCTaGCCTTCATGGAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMHVRLS*PSWSKM
Trigger: CATCTTGCTCCATGAAGGTCAGGACAATCTGACATG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTTTCCAGCAGGAGCTaGACCCTTAACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVSSRS*TLNWLE
Trigger: CTCCAGCCAGTTAAGGGTTCAGCTCCTGCTGGAAAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTCCCTAGCACAACATaGCGATGTCCTTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLPSTT*RCPWGP
Trigger: AGGTCCCCAAGGACATCGGCATGTTGTGCTAGGGAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCTGTAACACTATCTTaGCTGGTAGACTCCCTAGCA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPVTLS*LVDSLA
Trigger: TGCTAGGGAGTCTACCAGGCAAGATAGTGTTACAGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCACTACCTTGGCAGGCTaGCCTTGGGCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTTTLAG*PWAFLA
Trigger: AGCCAAGAATGCCCAAGGGCAGCCTGCCAAGGTAGT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTTGCTGTGGCTGCTaGACCTGCAGCTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFCCGC*TCSWIV
Trigger: AACTATCCAGCTGCAGGTGCAGCAGCCACAGCAAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCTGGTGTTCCAATCTaGGGTTTTCCTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSGVPI*GFPPFL
Trigger: CAGGAATGGAGGAAAACCGCAGATTGGAACACCAGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCTGGTGTTCCAATCTaGGGTTTTCCTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSGVPI*GFPPFL
Trigger: CAGGAATGGAGGAAAACCGCAGATTGGAACACCAGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTCTCGCAATGGCCTCTaGTACAATCCGATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSRNGL*YNPICF
Trigger: AAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCGCCATCTGGTTCTTaGACTGGTTCAGGGAGGATA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESPSGS*TGSGRI
Trigger: TATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTCTCCACAAAGAACTaGATGGAAGGCAAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVFSTKN*MEGKVS
Trigger: CGAGACTTTGCCTTCCATGCAGTTCTTTGTGGAGAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTTTTAGCTCCCATGTaGTATCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLLAPM*YPHRAE
Trigger: CTCTGCCCTATGAGGATAGCACATGGGAGCTAAAAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTTTAGCTCCCATGTaGTATCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLLAPM*YPHRAE
Trigger: CTCTGCCCTATGAGGATAGCACATGGGAGCTAAAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTCTCATCAGCCAGGATaGAGTTCTGCCTGTTATACC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESHQPG*SSACYT
Trigger: GGTATAACAGGCAGAACTGCATCCTGGCTGATGAGA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCTCATCAGCCAGGATaGAGTTCTGCCTGTTATACC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSHQPG*SSACYT
Trigger: GGTATAACAGGCAGAACTGCATCCTGGCTGATGAGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCTCATCAGCCAGGATaGAGTTCTGCCTGTTATACC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSHQPG*SSACYT
Trigger: GGTATAACAGGCAGAACTGCATCCTGGCTGATGAGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGCGTCAAACTTGTATaGGCCTGGGATGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSVKLV*AWDEAS
Trigger: GGACGCCTCATCCCAGGCGCATACAAGTTTGACGCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGTTCCAGGTCCATGTaGTTGAGACTATCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMCSRSM*LRLSSS
Trigger: GCTGCTTGATAGTCTCAAGCACATGGACCTGGAACA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTTCCAGGTCCATGTaGTTGAGACTATCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCSRSM*LRLSSS
Trigger: GCTGCTTGATAGTCTCAAGCACATGGACCTGGAACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGTTCCAGGTCCATGTaGTTGAGACTATCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRECSRSM*LRLSSS
Trigger: GCTGCTTGATAGTCTCAAGCACATGGACCTGGAACA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTGTTCCAGGTCCATGTaGTTGAGACTATCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTCSRSM*LRLSSS
Trigger: GCTGCTTGATAGTCTCAAGCACATGGACCTGGAACA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAATTCGATGACATCGTaGCTGGGCCTGCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNENSMTS*LGLQVI
Trigger: AATGACCTGCAGGCCCAGGCACGATGTCATCGAATT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAGAAGCAACAAAGCTTaGCTTAGCAAAGGTGGAACC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVRSNKA*LSKGGT
Trigger: GGTTCCACCTTTGCTAAGGCAAGCTTTGTTGCTTCT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGAAGCAACAAAGCTTaGCTTAGCAAAGGTGGAACC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRSNKA*LSKGGT
Trigger: GGTTCCACCTTTGCTAAGGCAAGCTTTGTTGCTTCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCATATACCAGGAGATaGTTTTCCACCCGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPYTRR*FSTRKQ
Trigger: CTGCTTTCGGGTGGAAAAGCATCTCCTGGTATATGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCACTCGATGTTCTGCTaGAATTGCTTTGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVHSMFC*NCFVIW
Trigger: CCAGATGACAAAGCAATTGCAGCAGAACATCGAGTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTTCTCTCTTGTAGCTaGGCTGATACGCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVLSCS*ADTLLL
Trigger: TAGTAACAGCGTATCAGCGCAGCTACAAGAGAGAAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCGATCCCAATGGAACTaGATGGTGTCAGGGTCATAT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTRSQWN*MVSGSY
Trigger: ATATGACCCTGACACCATGCAGTTCCATTGGGATCG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGGAGGCTGACACAATaGCAGCCGATCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERRLTQ*QPIFQK
Trigger: CTTTTGGAAGATCGGCTGGCATTGTGTCAGCCTCCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGAGAAGTCTGGGTCCTaGATGATGTTGCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLEKSGS*MMLQSV
Trigger: AACAGACTGCAACATCATGCAGGACCCAGACTTCTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGAGAAGTCTGGGTCCTaGATGATGTTGCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEEKSGS*MMLQSV
Trigger: AACAGACTGCAACATCATGCAGGACCCAGACTTCTC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGAGCTGGTGCTCCTaGTTGATGGTTCTGCATATA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWSWCS*LMVLHI
Trigger: TATATGCAGAACCATCAAGCAGGAGCACCAGCTCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGGAGCTGGTGCTCCTaGTTGATGGTTCTGCATATA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMWSWCS*LMVLHI
Trigger: TATATGCAGAACCATCAAGCAGGAGCACCAGCTCCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTGGAGCTGGTGCTCCTaGTTGATGGTTCTGCATATA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEWSWCS*LMVLHI
Trigger: TATATGCAGAACCATCAAGCAGGAGCACCAGCTCCA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTGGCCACCACCTCGTaGTCTAGCTTTAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELATTS*SSFKVR
Trigger: TCTGACTTTAAAGCTAGAGCACGAGGTGGTGGCCAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAAGATGGTGACAGCTTaGTCAAGTCCAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEKMVTA*SSPAQS
Trigger: ACTCTGAGCTGGACTTGAGCAAGCTGTCACCATCTT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAAGATGGTGACAGCTTaGTCAAGTCCAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLKMVTA*SSPAQS
Trigger: ACTCTGAGCTGGACTTGAGCAAGCTGTCACCATCTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGTCTAGCAAGTGGTTaGCTGGCCCCAAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECLASG*LAPKFL
Trigger: GAGGAATTTTGGGGCCAGGCAACCACTTGCTAGACA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCCACTTCTGTTTTCTaGGATCCTCCATATACGCTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGATSVF*DPPYTL
Trigger: TAGCGTATATGGAGGATCGCAGAAAACAGAAGTGGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGTTGGAACGTGTTATaGAGAGATAGAGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVCWNVL*RDRDPV
Trigger: CACTGGGTCTCTATCTCTGCATAACACGTTCCAACA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTTGGAACGTGTTATaGAGAGATAGAGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCWNVL*RDRDPV
Trigger: CACTGGGTCTCTATCTCTGCATAACACGTTCCAACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACTGTAGGCCACTACTaGTGTGTTGGAACGTGTTAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTVGHY*CVGTCY
Trigger: ATAACACGTTCCAACACAGCAGTAGTGGCCTACAGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTAGGCCACTACTaGTGTGTTGGAACGTGTTAT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVTVGHY*CVGTCY
Trigger: ATAACACGTTCCAACACAGCAGTAGTGGCCTACAGT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGATGCAGAAGTGGCACTaGTGTGACCCAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREMQKWH*CDPKMT
Trigger: TGTCATCTTTGGGTCACAGCAGTGCCACTTCTGCAT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTGGCTCTTGGAGACTTaGAAAAGTCCTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTWLLET*KSPDVG
Trigger: GCCAACATCAGGACTTTTGCAAGTCTCCAAGAGCCA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAGGCAAGAAACAAGTaGATGTCAGATTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEARNK*MSDCPD
Trigger: GTCAGGACAATCTGACATGCACTTGTTTCTTGCCTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCCATGATGGGGTCTaGCATCTTGGGAAAGTAATG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIHDGV*HLGKVM
Trigger: CATTACTTTCCCAAGATGGCAGACCCCATCATGGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTGATCTCGGCTCACTaGAACCTCTGCCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVISAH*NLCLLG
Trigger: ACCCAGAAGGCAGAGGTTGCAGTGAGCCGAGATCAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCGATTCACCCTTCATaGAGCAAGATGGCTACGTCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSIHPS*SKMATS
Trigger: AGACGTAGCCATCTTGCTCCATGAAGGGTGAATCGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430710.8
ENST00000645929.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTCAGGGCTGCCAGCTaGTTGCCCTGTAACACTATC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVRAAS*LPCNTI
Trigger: GATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGCTGCACCTGCAGCTaGATAGTTACTACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECCTCS*IVTTLA
Trigger: TGCCAAGGTAGTAACTATCCAGCTGCAGGTGCAGCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCACGGGCTCTCGCAATaGCCTCTGCTACAATCCGAT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTHGLSQ*PLLQSD
Trigger: ATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPLAER*ATRPHL
Trigger: TAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEIWFLH*FREDRL
Trigger: GAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACAAAGTCTCGCCATCTaGTTCTTGCACTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEQSLAI*FLHWFR
Trigger: CCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCACCTCTACGTAGTCTaGATTAAAGGGCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVHLYVV*IKGLFI
Trigger: GATGAAGAGCCCTTTAATCCAGACTACGTAGAGGTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAGTAATTGTGGACAGTaGGGCAATGACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESNCGQ*GNDQEG
Trigger: CCCTTCTTGGTCATTGCCCCACTGTCCACAATTACT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGTAATTGTGGACAGTaGGGCAATGACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSNCGQ*GNDQEG
Trigger: CCCTTCTTGGTCATTGCCCCACTGTCCACAATTACT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAGTAATTGTGGACAGTaGGGCAATGACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSNCGQ*GNDQEG
Trigger: CCCTTCTTGGTCATTGCCCCACTGTCCACAATTACT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGGCCAGACTGCCATaGTACACAATAGTGTTCATT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLARLP*YTIVFI
Trigger: AATGAACACTATTGTGTACCATGGCAGTCTGGCCAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTGATGAGATATGGGTaGTTGCAGCACTTGCGCAAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLMRYG*LQHLRN
Trigger: GTTGCGCAAGTGCTGCAACCACCCATATCTCATCAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTGATGAGATATGGGTaGTTGCAGCACTTGCGCAAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLMRYG*LQHLRN
Trigger: GTTGCGCAAGTGCTGCAACCACCCATATCTCATCAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGACCATTGATGAGATATaGGTGGTTGCAGCACTTGCG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMETIDEI*VVAALA
Trigger: CGCAAGTGCTGCAACCACCCATATCTCATCAATGGT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACCATTGATGAGATATaGGTGGTTGCAGCACTTGCG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTIDEI*VVAALA
Trigger: CGCAAGTGCTGCAACCACCCATATCTCATCAATGGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAATGGCCCGACAAATaGTCTCCACATCTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEWPDK*SPHLVQ
Trigger: CTGAACGAGATGTGGAGACCATTTGTCGGGCCATTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTGCCATTTTCAGCTaGGCTAATCAAGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLAIFS*ANQVPD
Trigger: ATCTGGGACTTGATTAGCCCAGCTGAAAATGGCAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAACACCTTTTCTGCTTaGTCTCCAATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGNTFSA*SPITSC
Trigger: GCAGGAGGTTATTGGAGACCAAGCAGAAAAGGTGTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATATGTCAATCTCACTaGCAATCGCACCCCCTAACA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGICQSH*QSHPLT
Trigger: TGTTAGGGGGTGCGATTGCCAGTGAGATTGACATAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATATGTCAATCTCACTaGCAATCGCACCCCCTAACA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVICQSH*QSHPLT
Trigger: TGTTAGGGGGTGCGATTGCCAGTGAGATTGACATAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCTTCGCCGGTCCCCACGTTCTGCAGCCTCTATCTTCATTTGTTCTCTCTTGTGTCCCACCAAGTTGTTaGAACCTCCAGTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: AFAGPHVLQPLSSFVLSCVPPSC*NLQLIH
Trigger: GTGGATCAACTGGAGGTTCCAACAACTTGGTGGGAC...ACAAGAGAGAACAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGGCGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWGTLE*FIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTCCTTTGGGGGACCTTaGAGTGGTTTATATTCAGGA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSFGGP*SGLYSG
Trigger: TCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCCTTTGGGGGACCTTaGAGTGGTTTATATTCAGGA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSFGGP*SGLYSG
Trigger: TCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEIILVL*GTLEWF
Trigger: AAACCACTCCAAGGTCCCCCAAAGGACCAAGATGAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TCATCAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTAAATGGCCTGGCTGTTaGGTCACCTGGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SSRDHPHHLGPLGDLGVVKWPGC*VTWASS
Trigger: AGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTT...AACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCCAATGGAACTGCATaGTGTCAGGGTCATATTCCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPNGTA*CQGHIP
Trigger: TGGAATATGACCCTGACACCATGCAGTTCCATTGGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCCAATGGAACTGCATaGTGTCAGGGTCATATTCCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPNGTA*CQGHIP
Trigger: TGGAATATGACCCTGACACCATGCAGTTCCATTGGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATGGCCACAAAGCCATaGAAGTACTTGGTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGMATKP*KYLVRL
Trigger: AAGCCTTACCAAGTACTTCCATGGCTTTGTGGCCAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATCCTCCAGTTTGACTaGTGGAACACTCCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEILQFD*WNTPGN
Trigger: GTTTCCCGGAGTGTTCCACCAGTCAAACTGGAGGAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGCTTTGAGCGGGACTaGTCAGTTAGCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESFERD*SVSFSS
Trigger: GGAAGAGAAGCTAACTGACCAGTCCCGCTCAAAGCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTTGGGAATCCATCTTaGGACATAGTGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREFGNPS*DIVRDR
Trigger: CCTGTCCCTCACTATGTCCCAAGATGGATTCCCAAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTTGGGAATCCATCTTaGGACATAGTGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFGNPS*DIVRDR
Trigger: CCTGTCCCTCACTATGTCCCAAGATGGATTCCCAAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATACTACTTCGTGGTGTaGGGACTGGAGAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEYYFVV*GLESHH
Trigger: ATGGTGACTCTCCAGTCCCCACACCACGAAGTAGTA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTTCCTCCTCTGCCATaGAAGCTGCACTACTACTTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELPPLP*KLHYYF
Trigger: GAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCACTACTGCTGTGTTaGAACGTGTTATGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPLLLC*NVLCRD
Trigger: ATCTCTGCATAACACGTTCCAACACAGCAGTAGTGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGTGGTGATGAAGCATaGTGCTGGAGTCTACATGAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGGDEA*CWSLHE
Trigger: CTCATGTAGACTCCAGCACCATGCTTCATCACCACC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGCGCTACATAGTCTGTaGTTAATGGAGGTGACTAGG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREALHSL*LMEVTR
Trigger: CCTAGTCACCTCCATTAACCACAGACTATGTAGCGC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGCGCTACATAGTCTGTaGTTAATGGAGGTGACTAGG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEALHSL*LMEVTR
Trigger: CCTAGTCACCTCCATTAACCACAGACTATGTAGCGC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCAGAGGAAGATGGTaGAACTCCTGCTCATACTGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFRGRW*NSCSYC
Trigger: GCAGTATGAGCAGGAGTTCCACCATCTTCCTCTGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643469.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGGAGCTGTTTCCTCTaGTGGAGGGACCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGSCFL*WRDQFT
Trigger: AGTGAACTGGTCCCTCCACCAGAGGAAACAGCTCCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGAGCTGTGGATTCTTTaGAAAGTTCTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLELWIL*KVLWEL
Trigger: CAGCTCCCACAGAACTTTCCAAAGAATCCACAGCTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTGGAGCTGGAGCTGTaGATTCTTTGGAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLELEL*ILWKVL
Trigger: CAGAACTTTCCAAAGAATCCACAGCTCCAGCTCCAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTGGAGCTGGAGCTGTaGATTCTTTGGAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELELEL*ILWKVL
Trigger: CAGAACTTTCCAAAGAATCCACAGCTCCAGCTCCAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCAAGGTTATGGATTCTaGAGCTGGAGCTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTQGYGF*SWSCGF
Trigger: GAATCCACAGCTCCAGCTCCAGAATCCATAACCTTG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAATCATGCAAGGTTATaGATTCTGGAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGNHARL*ILELEL
Trigger: CAGCTCCAGCTCCAGAATCCATAACCTTGCATGATT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGCTGGCAGGCTGAGTaGTATAATCATGCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGWQAE*YNHARL
Trigger: TAACCTTGCATGATTATACCACTCAGCCTGCCAGCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGGCTGGCAGGCTGAGTaGTATAATCATGCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREGWQAE*YNHARL
Trigger: TAACCTTGCATGATTATACCACTCAGCCTGCCAGCC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTGGCTGCTCCTGGCTaGCAGGCTGAGTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLAAPG*QAEWYN
Trigger: ATTATACCACTCAGCCTGCCAGCCAGGAGCAGCCAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATGAAAGGATTCCCTTaGCTCAGGATCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEMKGFP*LRISWL
Trigger: GAGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGGGTCTTGTGTGACCTaGTTAAAGCTGTCATCAGTC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTGSCVT*LKLSSV
Trigger: GACTGATGACAGCTTTAACCAGGTCACACAAGACCC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTATTACCAGAGACAATaGAAACACCTGGTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGYYQRQ*KHLVEG
Trigger: CCCTTCGACCAGGTGTTTCCATTGTCTCTGGTAATA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTATTACCAGAGACAATaGAAACACCTGGTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVYYQRQ*KHLVEG
Trigger: CCCTTCGACCAGGTGTTTCCATTGTCTCTGGTAATA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGTTCCCAGGGACCTTaGCGGCCAACACTGTATTAC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGSQGP*RPTLYY
Trigger: GTAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCTTTACTGGTCGGCTaGGCTGGACAATGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTALLVG*AGQCAE
Trigger: TTCAGCGCATTGTCCAGCCCAGCCGACCAGTAAAGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGACCAGCTGCTTTACTaGTCGGCTGGGCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTDQLLY*SAGLDN
Trigger: ATTGTCCAGCCCAGCCGACCAGTAAAGCAGCTGGTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAACCCTTAACTGGCTaGAGGACCAGCTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEPLTG*RTSCFT
Trigger: AGTAAAGCAGCTGGTCCTCCAGCCAGTTAAGGGTTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGTTTCGATTCACCCTaGGTAGGTGTAGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERFDSP*VGVEVS
Trigger: ACTGACCTCTACACCTACCCAGGGTGAATCGAAACG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCTGCAGTACCACCTTaGCTGGTACTGAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEAAVPP*LVLKVF
Trigger: AAAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTTAACTTGGCGGTTTaGGCGTCTCTTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELNLAV*ASLLNA
Trigger: AGCATTCAGAAGAGACGCTCAAACCGCCAAGTTAAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTCTGGGTGCCTTGACTaGATCCGTTTAAATTCTCGA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESGCLD*IRLNSR
Trigger: TCGAGAATTTAAACGGATTCAGTCAAGGCACCCAGA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTCTGGGTGCCTTaGCTGAATCCGTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMEFWVP*LNPFKF
Trigger: GAATTTAAACGGATTCAGTCAAGGCACCCAGAACTC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTAACCCCTTCCAACTaGTATTCCCGTAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLTPSN*YSRSWF
Trigger: AAACCAGCTACGGGAATATCAGTTGGAAGGGGTTAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTAACCCCTTCCAACTaGTATTCCCGTAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELTPSN*YSRSWF
Trigger: AAACCAGCTACGGGAATATCAGTTGGAAGGGGTTAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTTAACCCCTTCCAACTaGTATTCCCGTAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLTPSN*YSRSWF
Trigger: AAACCAGCTACGGGAATATCAGTTGGAAGGGGTTAA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCATCTCAAAAGTGGTaGTCAGAGCGTCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSSQKW*SERQTC
Trigger: ACAAGTTTGACGCTCTGATCACCACTTTTGAGATGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTCATCTCAAAAGTGGTaGTCAGAGCGTCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSSQKW*SERQTC
Trigger: ACAAGTTTGACGCTCTGATCACCACTTTTGAGATGA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACATCATCTTCCTCCATaGTGGCTGCATATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEHHLPP*WLHMLL
Trigger: AAGGAGCATATGCAGCCATCATGGAGGAAGATGATG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCGCTTGAAGCGTCCATaGGATAAAATATCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRLKRP*DKISRH
Trigger: ATGGCGAGATATTTTATCTCATGGACGCTTCAAGCG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCAGTCATACGTCGCTTaGAGCGTCCATGAGATAAAA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTQSYVA*SVHEIK
Trigger: TTTTATCTCATGGACGCTTCAAGCGACGTATGACTG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCAGTCATACGTCGCTTaGAGCGTCCATGAGATAAAA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMQSYVA*SVHEIK
Trigger: TTTTATCTCATGGACGCTTCAAGCGACGTATGACTG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCTCCATCAATCACTaGGATCTCCTCATCCATCAT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGISINH*DLLIHH
Trigger: ATGATGGATGAGGAGATCTCAGTGATTGATGGAGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTCCCCTTCTTCTTATaGAACAGTGGATGTCCATCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFPFFL*NSGCPS
Trigger: AGATGGACATCCACTGTTTCATAAGAAGAAGGGGAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATCTTCACTGGAGTCTaGGTTAGCTGGCATCATAGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEIFTGV*VSWHHR
Trigger: CCTATGATGCCAGCTAACTCAGACTCCAGTGAAGAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCATCCTGGTTCATCTaGTCCAAGGAGTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPSWFI*SKESRE
Trigger: CTCTCTGGACTCCTTGGATCAGATGAACCAGGATGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACATGTCAGATTGTCCTaGCCTTCATGGAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEHVRLS*PSWSKM
Trigger: CATCTTGCTCCATGAAGGTCAGGACAATCTGACATG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTGATACCTTGGGCCTaGATTTGTGCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVIPWA*ICATWA
Trigger: TGCCCATGTGGCACAAATTCAGGCCCAAGGTATCAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCTGAGCTGTGCTGGTaGTACCTTGGGCCTGAATTT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTAELCW*YLGPEF
Trigger: AAATTCAGGCCCAAGGTATCACCAGCACAGCTCAGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGTGGCTGCTGCACCTaGAGCTGGATAGTTACTACC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTCGCCT*SWIVTT
Trigger: GGTAGTAACTATCCAGCTGCAGGTGCAGCAGCCACA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCTCGCAATGGCCTCTaGTACAATCCGATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSRNGL*YNPICF
Trigger: AAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCTCGCAATGGCCTCTaGTACAATCCGATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSRNGL*YNPICF
Trigger: AAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTCTCCACAAAGAACTaGATGGAAGGCAAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFSTKN*MEGKVS
Trigger: CGAGACTTTGCCTTCCATGCAGTTCTTTGTGGAGAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCTCCACAAAGAACTaGATGGAAGGCAAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFSTKN*MEGKVS
Trigger: CGAGACTTTGCCTTCCATGCAGTTCTTTGTGGAGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTTTTAGCTCCCATGTaGTATCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELLAPM*YPHRAE
Trigger: CTCTGCCCTATGAGGATAGCACATGGGAGCTAAAAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTCCAGGCACTTGCCTaGGGACGATTCACCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTFQALA*GRFTLL
Trigger: CAAAAGGGTGAATCGTCCGCAGGCAAGTGCCTGGAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTTCTTCCAGGCACTTaGCTGCGGACGATTCACCCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTFLPGT*LRTIHP
Trigger: AGGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTTGAATCATCTGCCTaGTGGCCAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVESSA*WPDCHG
Trigger: ACCATGGCAGTCTGGCCAGCAGGCAGATGATTCAAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGAAGCAACAAAGCTTaGCTTAGCAAAGGTGGAACC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRSNKA*LSKGGT
Trigger: GGTTCCACCTTTGCTAAGGCAAGCTTTGTTGCTTCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAGAAGCAACAAAGCTTaGCTTAGCAAAGGTGGAACC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERSNKA*LSKGGT
Trigger: GGTTCCACCTTTGCTAAGGCAAGCTTTGTTGCTTCT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAGAAGCAACAAAGCTTaGCTTAGCAAAGGTGGAACC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMERSNKA*LSKGGT
Trigger: GGTTCCACCTTTGCTAAGGCAAGCTTTGTTGCTTCT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCATATACCAGGAGATaGTTTTCCACCCGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPYTRR*FSTRKQ
Trigger: CTGCTTTCGGGTGGAAAAGCATCTCCTGGTATATGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCACTCGATGTTCTGCTaGAATTGCTTTGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHSMFC*NCFVIW
Trigger: CCAGATGACAAAGCAATTGCAGCAGAACATCGAGTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGTTCTCTCTTGTAGCTaGGCTGATACGCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMVLSCS*ADTLLL
Trigger: TAGTAACAGCGTATCAGCGCAGCTACAAGAGAGAAC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTTCTCTCTTGTAGCTaGGCTGATACGCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVLSCS*ADTLLL
Trigger: TAGTAACAGCGTATCAGCGCAGCTACAAGAGAGAAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTGTTTCTCCCGCCGTaGAATTTCTTTCAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLFLPP*NFFQLE
Trigger: TTCAAGCTGAAAGAAATTGCACGGCGGGAGAAACAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGATCCCAATGGAACTaGATGGTGTCAGGGTCATAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERSQWN*MVSGSY
Trigger: ATATGACCCTGACACCATGCAGTTCCATTGGGATCG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAGAAGTCTGGGTCCTaGATGATGTTGCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEKSGS*MMLQSV
Trigger: AACAGACTGCAACATCATGCAGGACCCAGACTTCTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAAGATGGTGACAGCTTaGTCAAGTCCAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEKMVTA*SSPAQS
Trigger: ACTCTGAGCTGGACTTGAGCAAGCTGTCACCATCTT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGCCACTTCTGTTTTCTaGGATCCTCCATATACGCTA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEATSVF*DPPYTL
Trigger: TAGCGTATATGGAGGATCGCAGAAAACAGAAGTGGC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGCCACTTCTGTTTTCTaGGATCCTCCATATACGCTA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTATSVF*DPPYTL
Trigger: TAGCGTATATGGAGGATCGCAGAAAACAGAAGTGGC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGACTGTAGGCCACTACTaGTGTGTTGGAACGTGTTAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMETVGHY*CVGTCY
Trigger: ATAACACGTTCCAACACAGCAGTAGTGGCCTACAGT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACTGTAGGCCACTACTaGTGTGTTGGAACGTGTTAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTVGHY*CVGTCY
Trigger: ATAACACGTTCCAACACAGCAGTAGTGGCCTACAGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATGCAGAAGTGGCACTaGTGTGACCCAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEMQKWH*CDPKMT
Trigger: TGTCATCTTTGGGTCACAGCAGTGCCACTTCTGCAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGCTCTTGGAGACTTaGAAAAGTCCTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWLLET*KSPDVG
Trigger: GCCAACATCAGGACTTTTGCAAGTCTCCAAGAGCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCCACTTCTGTTTTCTaGGATCCTCCATATACTCTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGATSVF*DPPYTL
Trigger: TAGAGTATATGGAGGATCGCAGAAAACAGAAGTGGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000553870.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGAGGCAAGAAACAAGTaGATGTCAGATTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLEARNK*MSDCPD
Trigger: GTCAGGACAATCTGACATGCACTTGTTTCTTGCCTC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGAGGCAAGAAACAAGTaGATGTCAGATTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREEARNK*MSDCPD
Trigger: GTCAGGACAATCTGACATGCACTTGTTTCTTGCCTC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGATCCATGATGGGGTCTaGCATCTTGGGAAAGTAATG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMIHDGV*HLGKVM
Trigger: CATTACTTTCCCAAGATGGCAGACCCCATCATGGAT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTGGGCCTGAATTTGTaGCACATGGGCACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLGLNL*HMGTSD
Trigger: GTCACTGGTGCCCATGTGGCACAAATTCAGGCCCAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATGGTGGAACTCCTGTaGAAGTCCTGGTACTTCCTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEMVELL*KSWYFL
Trigger: AAGGAAGTACCAGGACTTGCACAGGAGTTCCACCAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCGATTCACCCTTCATaGAGCAAGATGGCTACGTCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESIHPS*SKMATS
Trigger: AGACGTAGCCATCTTGCTCCATGAAGGGTGAATCGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430710.8
ENST00000645929.1
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTCTCTTGCTTCTTCTaGTGTTCCAATCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFSCFF*CSNLRF
Trigger: AAACCGCAGATTGGAACACCAGAAGAAGCAAGAGAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGGCTCAGGTTTTATTaGACCAGTTACATCCACCTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRLRFY*TSYIHL
Trigger: GAGGTGGATGTAACTGGTCCAATAAAACCTGAGCCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAGGCTCAGGTTTTATTaGACCAGTTACATCCACCTC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMERLRFY*TSYIHL
Trigger: GAGGTGGATGTAACTGGTCCAATAAAACCTGAGCCT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAGGCTCAGGTTTTATTaGACCAGTTACATCCACCTC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERLRFY*TSYIHL
Trigger: GAGGTGGATGTAACTGGTCCAATAAAACCTGAGCCT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTGCATCTTCTTCACTaGGATTCTCCACAAAGAACT +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLHLLH*DSPQRT
Trigger: AGTTCTTTGTGGAGAATCCCAGTGAAGAAGATGCAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGCATCTTCTTCACTaGGATTCTCCACAAAGAACT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLHLLH*DSPQRT
Trigger: AGTTCTTTGTGGAGAATCCCAGTGAAGAAGATGCAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCACCTCTACGTAGTCTaGATTAAAGGGCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHLYVV*IKGLFI
Trigger: GATGAAGAGCCCTTTAATCCAGACTACGTAGAGGTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCACCTCTACGTAGTCTaGATTAAAGGGCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREHLYVV*IKGLFI
Trigger: GATGAAGAGCCCTTTAATCCAGACTACGTAGAGGTG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCACCTCTACGTAGTCTaGATTAAAGGGCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEHLYVV*IKGLFI
Trigger: GATGAAGAGCCCTTTAATCCAGACTACGTAGAGGTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACCAAGAAGGGACCATaGATGCCCACATTATATACT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTKKGP*MPTLYT
Trigger: AGTATATAATGTGGGCATCCATGGTCCCTTCTTGGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTGGCCAGACTGCCATaGTACACAATAGTGTTCATT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELARLP*YTIVFI
Trigger: AATGAACACTATTGTGTACCATGGCAGTCTGGCCAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTGGCCAGACTGCCATaGTACACAATAGTGTTCATT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELARLP*YTIVFI
Trigger: AATGAACACTATTGTGTACCATGGCAGTCTGGCCAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTGATGAGATATGGGTaGTTGCAGCACTTGCGCAAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELMRYG*LQHLRN
Trigger: GTTGCGCAAGTGCTGCAACCACCCATATCTCATCAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTCAGAGTGCTAAAGTaGCGCGTTTGTTTTCGTACT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFRVLK*RVCFRT
Trigger: AGTACGAAAACAAACGCGCCACTTTAGCACTCTGAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTGCCATTTTCAGCTaGGCTAATCAAGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLAIFS*ANQVPD
Trigger: ATCTGGGACTTGATTAGCCCAGCTGAAAATGGCAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTTGCCATTTTCAGCTaGGCTAATCAAGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELAIFS*ANQVPD
Trigger: ATCTGGGACTTGATTAGCCCAGCTGAAAATGGCAAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAACACCTTTTCTGCTTaGTCTCCAATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLNTFSA*SPITSC
Trigger: GCAGGAGGTTATTGGAGACCAAGCAGAAAAGGTGTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAACACCTTTTCTGCTTaGTCTCCAATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTNTFSA*SPITSC
Trigger: GCAGGAGGTTATTGGAGACCAAGCAGAAAAGGTGTT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAACACCTTTTCTGCTTaGTCTCCAATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMENTFSA*SPITSC
Trigger: GCAGGAGGTTATTGGAGACCAAGCAGAAAAGGTGTT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGATATGTCAATCTCACTaGCAATCGCACCCCCTAACA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMICQSH*QSHPLT
Trigger: TGTTAGGGGGTGCGATTGCCAGTGAGATTGACATAT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATATGTCAATCTCACTaGCAATCGCACCCCCTAACA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLICQSH*QSHPLT
Trigger: TGTTAGGGGGTGCGATTGCCAGTGAGATTGACATAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATATGTCAATCTCACTaGCAATCGCACCCCCTAACA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEICQSH*QSHPLT
Trigger: TGTTAGGGGGTGCGATTGCCAGTGAGATTGACATAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCAGTTGATCCACTACTaGGAACCATATGTCAATCTC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVQLIHY*EPYVNL
Trigger: GAGATTGACATATGGTTCCCAGTAGTGGATCAACTG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCATCTCCATCAGTTGATCCACTACTaGGAACCATATGTCAATCTC +
Preference number: 4 (lower is better)
Translates to: PEARINGLAVGSPGLHLHQLIHY*EPYVNL
Trigger: GAGATTGACATATGGTTCCCAGTAGTGGATCAACTG...ATGGAGATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAGTTGATCCACTACTaGGAACCATATGTCAATCTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQLIHY*EPYVNL
Trigger: GAGATTGACATATGGTTCCCAGTAGTGGATCAACTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTGGGTCTGCCCTCATaGTATTATATTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLGLPS*YYISHS
Trigger: GCTATGAGAAATATAATACCATGAGGGCAGACCCAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGGGTCTGCCCTCATaGTATTATATTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLGLPS*YYISHS
Trigger: GCTATGAGAAATATAATACCATGAGGGCAGACCCAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWGTLE*FIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTWGTLE*FIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCCTTTGGGGGACCTTaGAGTGGTTTATATTCAGGA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSFGGP*SGLYSG
Trigger: TCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEIILVL*GTLEWF
Trigger: AAACCACTCCAAGGTCCCCCAAAGGACCAAGATGAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCCAATGGAACTGCATaGTGTCAGGGTCATATTCCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPNGTA*CQGHIP
Trigger: TGGAATATGACCCTGACACCATGCAGTTCCATTGGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATGGCCACAAAGCCATaGAAGTACTTGGTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTMATKP*KYLVRL
Trigger: AAGCCTTACCAAGTACTTCCATGGCTTTGTGGCCAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATGGCCACAAAGCCATaGAAGTACTTGGTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLMATKP*KYLVRL
Trigger: AAGCCTTACCAAGTACTTCCATGGCTTTGTGGCCAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGATGGCCACAAAGCCATaGAAGTACTTGGTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREMATKP*KYLVRL
Trigger: AAGCCTTACCAAGTACTTCCATGGCTTTGTGGCCAT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCAGAAAAGAGAAGTCTaGGTCCTGCATGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTQKREV*VLHDVA
Trigger: TGCAACATCATGCAGGACCCAGACTTCTCTTTTCTG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCAGAAAAGAGAAGTCTaGGTCCTGCATGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLQKREV*VLHDVA
Trigger: TGCAACATCATGCAGGACCCAGACTTCTCTTTTCTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCAGAAAAGAGAAGTCTaGGTCCTGCATGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEQKREV*VLHDVA
Trigger: TGCAACATCATGCAGGACCCAGACTTCTCTTTTCTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTGGGAATCCATCTTaGGACATAGTGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFGNPS*DIVRDR
Trigger: CCTGTCCCTCACTATGTCCCAAGATGGATTCCCAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCACTACTGCTGTGTTaGAACGTGTTATGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPLLLC*NVLCRD
Trigger: ATCTCTGCATAACACGTTCCAACACAGCAGTAGTGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCACTACTGCTGTGTTaGAACGTGTTATGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPLLLC*NVLCRD
Trigger: ATCTCTGCATAACACGTTCCAACACAGCAGTAGTGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACCACCCATCACAAATaGCATAAAAGGCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTTHHK*HKRQRC
Trigger: GCATCTTTGCCTTTTATGCCATTTGTGATGGGTGGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCGCTACATAGTCTGTaGTTAATGGAGGTGACTAGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEALHSL*LMEVTR
Trigger: CCTAGTCACCTCCATTAACCACAGACTATGTAGCGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGCTGTTTCCTCTGGTaGAGGGACCAGTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSCFLW*RDQFTC
Trigger: GCAAGTGAACTGGTCCCTCCACCAGAGGAAACAGCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTTTGGAAAGTTCTGTaGGAGCTGTTTCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELWKVL*ELFPLV
Trigger: CACCAGAGGAAACAGCTCCCACAGAACTTTCCAAAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACAAGGTTATGGATTCTaGAGCTGGAGCTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEQGYGF*SWSCGF
Trigger: GAATCCACAGCTCCAGCTCCAGAATCCATAACCTTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAATCATGCAAGGTTATaGATTCTGGAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLNHARL*ILELEL
Trigger: CAGCTCCAGCTCCAGAATCCATAACCTTGCATGATT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAATCATGCAAGGTTATaGATTCTGGAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMNHARL*ILELEL
Trigger: CAGCTCCAGCTCCAGAATCCATAACCTTGCATGATT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGCTGGCAGGCTGAGTaGTATAATCATGCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGWQAE*YNHARL
Trigger: TAACCTTGCATGATTATACCACTCAGCCTGCCAGCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGGTCTTGTGTGACCTaGTTAAAGCTGTCATCAGTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGSCVT*LKLSSV
Trigger: GACTGATGACAGCTTTAACCAGGTCACACAAGACCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTCATCTTCTCGAGGTaGCTGTGCAGGCATGACTTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTFIFSR*LCRHDF
Trigger: GAAGTCATGCCTGCACAGTCACCTCGAGAAGATGAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTTTGAGCGTCTCTTCTaGATGCTGCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMFERLF*MLLSSS
Trigger: AGATGAAGAAAGCAGCATTCAGAAGAGACGCTCAAA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTTGAGCGTCTCTTCTaGATGCTGCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREFERLF*MLLSSS
Trigger: AGATGAAGAAAGCAGCATTCAGAAGAGACGCTCAAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTCTTCATCATCTGTaGTCTTTATATCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLLHHL*SLYPGP
Trigger: AGGACCTGGATATAAAGATCACAGATGATGAAGAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAAGAAGTGTCTCATCTaGGCCATTTTGGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGKKCLI*AILVLK
Trigger: CTTCAAAACCAAAATGGCTCAGATGAGACACTTCTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCCTTGTCAATACTGTaGGACTCATCCAATATCCTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSLSIL*DSSNIL
Trigger: TAGGATATTGGATGAGTCTCACAGTATTGACAAGGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCTGGGTGCCTTGACTaGATCCGTTTAAATTCTCGA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESGCLD*IRLNSR
Trigger: TCGAGAATTTAAACGGATTCAGTCAAGGCACCCAGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAGTTCTGGGTGCCTTaGCTGAATCCGTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEFWVP*LNPFKF
Trigger: GAATTTAAACGGATTCAGTCAAGGCACCCAGAACTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGACGATTCACCCTTTTaGGTTCTGGGTGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTDDSPF*VLGALT
Trigger: AGTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTAACCCCTTCCAACTaGTATTCCCGTAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELTPSN*YSRSWF
Trigger: AAACCAGCTACGGGAATATCAGTTGGAAGGGGTTAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGATGAGGCGTCCCCGTaGATCTTTGCAGTACATTTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTDEASP*IFAVHF
Trigger: GAAATGTACTGCAAAGATTCACGGGGACGCCTCATC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCATCTCAAAAGTGGTaGTCAGAGCGTCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSSQKW*SERQTC
Trigger: ACAAGTTTGACGCTCTGATCACCACTTTTGAGATGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTCATCTCAAAAGTGGTaGTCAGAGCGTCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESSQKW*SERQTC
Trigger: ACAAGTTTGACGCTCTGATCACCACTTTTGAGATGA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCAATGGTGTTCCTGTaGGTAGCACCTTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTAMVFL*VAPCVP
Trigger: TGGAACACAAGGTGCTACTCACAGGAACACCATTGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTAGGCATGTTGGTATaGCCTGCCCCTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLGMLV*PAPLER
Trigger: CCTTTCCAAAGGGGCAGGTCATACCAACATGCCTAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGCTTGAAGCGTCCATaGGATAAAATATCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERLKRP*DKISRH
Trigger: ATGGCGAGATATTTTATCTCATGGACGCTTCAAGCG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACAGTCATACGTCGCTTaGAGCGTCCATGAGATAAAA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEQSYVA*SVHEIK
Trigger: TTTTATCTCATGGACGCTTCAAGCGACGTATGACTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATCTCCATCAATCACTaGGATCTCCTCATCCATCAT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTISINH*DLLIHH
Trigger: ATGATGGATGAGGAGATCTCAGTGATTGATGGAGAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATCTCCATCAATCACTaGGATCTCCTCATCCATCAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLISINH*DLLIHH
Trigger: ATGATGGATGAGGAGATCTCAGTGATTGATGGAGAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATCTCCATCAATCACTaGGATCTCCTCATCCATCAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEISINH*DLLIHH
Trigger: ATGATGGATGAGGAGATCTCAGTGATTGATGGAGAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTCCCCTTCTTCTTATaGAACAGTGGATGTCCATCT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFPFFL*NSGCPS
Trigger: AGATGGACATCCACTGTTTCATAAGAAGAAGGGGAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCCCCTTCTTCTTATaGAACAGTGGATGTCCATCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFPFFL*NSGCPS
Trigger: AGATGGACATCCACTGTTTCATAAGAAGAAGGGGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTCCCCTTCTTCTTATaGAACAGTGGATGTCCATCT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREFPFFL*NSGCPS
Trigger: AGATGGACATCCACTGTTTCATAAGAAGAAGGGGAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGACTTGCAAAAGTCCTaGTGTTGGCGTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTDLQKS*CWRRCL
Trigger: CAGACATCGACGCCAACATCAGGACTTTTGCAAGTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTTTGCTGTGGCTGCTaGACCTGCAGCTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTFCCGC*TCSWIV
Trigger: AACTATCCAGCTGCAGGTGCAGCAGCCACAGCAAAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCTCGCAATGGCCTCTaGTACAATCCGATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESRNGL*YNPICF
Trigger: AAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCAGCACTCTTCTTCCTaGGTTTCTTCTCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTQHSSS*VSSRLP
Trigger: AGGAAGGCGAGAAGAAACGCAGGAAGAAGAGTGCTG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTCTCTTCTGAATGCTaGTTTCTTCATCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVSSEC*FLHLLE
Trigger: CTCGAGAAGATGAAGAAAGCAGCATTCAGAAGAGAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGTCTCTTCTGAATGCTaGTTTCTTCATCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMVSSEC*FLHLLE
Trigger: CTCGAGAAGATGAAGAAAGCAGCATTCAGAAGAGAC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTCGCCATCTGGTTCTTaGACTGGTTCAGGGAGGATA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSPSGS*TGSGRI
Trigger: TATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTCTCCACAAAGAACTaGATGGAAGGCAAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFSTKN*MEGKVS
Trigger: CGAGACTTTGCCTTCCATGCAGTTCTTTGTGGAGAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGAAGGGACCATGGATaGCCACATTATATACTTCCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTRRDHG*PHYILP
Trigger: AGGAAGTATATAATGTGGGCATCCATGGTCCCTTCT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGAAGGGACCATGGATaGCCACATTATATACTTCCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRRDHG*PHYILP
Trigger: AGGAAGTATATAATGTGGGCATCCATGGTCCCTTCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAGAAGGGACCATGGATaGCCACATTATATACTTCCT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMERRDHG*PHYILP
Trigger: AGGAAGTATATAATGTGGGCATCCATGGTCCCTTCT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGACTATCAAGCAGCTTaGAATTACGGTTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDYQAA*NYGFSV
Trigger: GACTGAAAAACCGTAATTGCAAGCTGCTTGATAGTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACACTCGATGTTCTGCTaGAATTGCTTTGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEHSMFC*NCFVIW
Trigger: CCAGATGACAAAGCAATTGCAGCAGAACATCGAGTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCAACACTCGATGTTCTaGTGCAATTGCTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREQHSMF*CNCFVI
Trigger: GATGACAAAGCAATTGCAGCAGAACATCGAGTGTTG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCAACACTCGATGTTCTaGTGCAATTGCTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEQHSMF*CNCFVI
Trigger: GATGACAAAGCAATTGCAGCAGAACATCGAGTGTTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CCTCACTGTCCCACCAAGTTGTTGGAACCTCCAGTTGATCCACTACTGGGAACCGTTCTCTCTTGTAGCTaGGCTGATACGCTGTTACTA +
Preference number: 4 (lower is better)
Translates to: PHCPTKLLEPPVDPLLGTVLSCS*ADTLLL
Trigger: TAGTAACAGCGTATCAGCGCAGCTACAAGAGAGAAC...GGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR GCA 90 bp CTGCAATTGCTTTGTCATCTGGTCGGCCAGCCTTTTCTAGGAAACATAAGGCTGCCGGTCCCCACGTTCTaGAGCCTCTATCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: LQLLCHLVGQPFLGNIRLPVPTF*SLYLHL
Trigger: CAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGG...CAGCCTTATGTTTCCTAGAAAAGGCTGGCCGACCAGATGACAAAGCAATTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTGTTTCTCCCGCCGTaGAATTTCTTTCAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLFLPP*NFFQLE
Trigger: TTCAAGCTGAAAGAAATTGCACGGCGGGAGAAACAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTCGCCATCAACTTGTaGTTCTGGAATGTTAACTTC +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVFAINL*FWNVNF
Trigger: GAAGTTAACATTCCAGAAGCACAAGTTGATGGCGAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTCGCCATCAACTTGTaGTTCTGGAATGTTAACTTC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFAINL*FWNVNF
Trigger: GAAGTTAACATTCCAGAAGCACAAGTTGATGGCGAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCCACTTCTGTTTTCTaGGATCCTCCATATACGCTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEATSVF*DPPYTL
Trigger: TAGCGTATATGGAGGATCGCAGAAAACAGAAGTGGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATCCATGATGGGGTCTaGCATCTTGGGAAAGTAATG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEIHDGV*HLGKVM
Trigger: CATTACTTTCCCAAGATGGCAGACCCCATCATGGAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGCTGCACCTGCAGCTaGATAGTTACTACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTCCTCS*IVTTLA
Trigger: TGCCAAGGTAGTAACTATCCAGCTGCAGGTGCAGCA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCTCTTGCTTCTTCTaGTGTTCCAATCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFSCFF*CSNLRF
Trigger: AAACCGCAGATTGGAACACCAGAAGAAGCAAGAGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTCTCTTGCTTCTTCTaGTGTTCCAATCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREFSCFF*CSNLRF
Trigger: AAACCGCAGATTGGAACACCAGAAGAAGCAAGAGAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGGCTCAGGTTTTATTaGACCAGTTACATCCACCTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERLRFY*TSYIHL
Trigger: GAGGTGGATGTAACTGGTCCAATAAAACCTGAGCCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTIWFLH*FREDRL
Trigger: GAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCAAAGTCTCGCCATCTaGTTCTTGCACTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTQSLAI*FLHWFR
Trigger: CCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTGCATCTTCTTCACTaGGATTCTCCACAAAGAACT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELHLLH*DSPQRT
Trigger: AGTTCTTTGTGGAGAATCCCAGTGAAGAAGATGCAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTATCCTTCTCTAGTTaGGAGATAGTAGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLSFSS*EIVAHS
Trigger: TGAATGGGCTACTATCTCCCAACTAGAGAAGGATAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACACCTCTACGTAGTCTaGATTAAAGGGCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEHLYVV*IKGLFI
Trigger: GATGAAGAGCCCTTTAATCCAGACTACGTAGAGGTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGACCAAGAAGGGACCATaGATGCCCACATTATATACT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMETKKGP*MPTLYT
Trigger: AGTATATAATGTGGGCATCCATGGTCCCTTCTTGGT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACCAAGAAGGGACCATaGATGCCCACATTATATACT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTKKGP*MPTLYT
Trigger: AGTATATAATGTGGGCATCCATGGTCCCTTCTTGGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTGGCCAGACTGCCATaGTACACAATAGTGTTCATT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELARLP*YTIVFI
Trigger: AATGAACACTATTGTGTACCATGGCAGTCTGGCCAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGGTTTTTCAGTCGATaGGCTTCATCAATGATAACA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRFFSR*ASSMIT
Trigger: TGTTATCATTGATGAAGCCCATCGACTGAAAAACCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTATGACCTGCCCCTTTaGAAAGGAAGGAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLYDLPL*KGRRNS
Trigger: AGAATTTCTCCTTCCTTTCCAAAGGGGCAGGTCATA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTATGACCTGCCCCTTTaGAAAGGAAGGAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTYDLPL*KGRRNS
Trigger: AGAATTTCTCCTTCCTTTCCAAAGGGGCAGGTCATA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTATGACCTGCCCCTTTaGAAAGGAAGGAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEYDLPL*KGRRNS
Trigger: AGAATTTCTCCTTCCTTTCCAAAGGGGCAGGTCATA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTTCAGAGTGCTAAAGTaGCGCGTTTGTTTTCGTACT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMFRVLK*RVCFRT
Trigger: AGTACGAAAACAAACGCGCCACTTTAGCACTCTGAA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCAGAGTGCTAAAGTaGCGCGTTTGTTTTCGTACT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFRVLK*RVCFRT
Trigger: AGTACGAAAACAAACGCGCCACTTTAGCACTCTGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTTGCCATTTTCAGCTaGGCTAATCAAGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELAIFS*ANQVPD
Trigger: ATCTGGGACTTGATTAGCCCAGCTGAAAATGGCAAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAACACCTTTTCTGCTTaGTCTCCAATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNENTFSA*SPITSC
Trigger: GCAGGAGGTTATTGGAGACCAAGCAGAAAAGGTGTT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCTTCGCCGGTCCCCACGTTCTGCAGCCTCTATCTTCATTTGTTCTCTCTTGTATATGTCAATCTCACTaGCAATCGCACCCCCTAACA +
Preference number: 4 (lower is better)
Translates to: AFAGPHVLQPLSSFVLSCICQSH*QSHPLT
Trigger: TGTTAGGGGGTGCGATTGCCAGTGAGATTGACATAT...ACAAGAGAGAACAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGGCGAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCAGTTGATCCACTACTaGGAACCATATGTCAATCTC +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMQLIHY*EPYVNL
Trigger: GAGATTGACATATGGTTCCCAGTAGTGGATCAACTG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCAGTTGATCCACTACTaGGAACCATATGTCAATCTC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTQLIHY*EPYVNL
Trigger: GAGATTGACATATGGTTCCCAGTAGTGGATCAACTG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTGGGTCTGCCCTCATaGTATTATATTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLGLPS*YYISHS
Trigger: GCTATGAGAAATATAATACCATGAGGGCAGACCCAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWGTLE*FIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCCTTTGGGGGACCTTaGAGTGGTTTATATTCAGGA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESFGGP*SGLYSG
Trigger: TCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCATCACCCTCATCATCTTaGTCCTTTGGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: GSPSSSWSFGGPWSGLYSSPSSS*SFGGPW
Trigger: CCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGA...TGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACAGAAAAGAGAAGTCTaGGTCCTGCATGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEQKREV*VLHDVA
Trigger: TGCAACATCATGCAGGACCCAGACTTCTCTTTTCTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTCTTATGAAACAGTaGATGTCCATCTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLLMKQ*MSISHY
Trigger: GTAATGGGAGATGGACATCCACTGTTTCATAAGAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCACTACTGCTGTGTTaGAACGTGTTATGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPLLLC*NVLCRD
Trigger: ATCTCTGCATAACACGTTCCAACACAGCAGTAGTGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACCACCCATCACAAATaGCATAAAAGGCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTTHHK*HKRQRC
Trigger: GCATCTTTGCCTTTTATGCCATTTGTGATGGGTGGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGGCTCAGGATCTCCTaGCTCTTGGAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTWLRIS*LLETCK
Trigger: TTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCATGAAAGGATTCCCTTaGCTCAGGATCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTMKGFP*LRISWL
Trigger: GAGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCAT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGAACCCTTAACTGGCTaGAGGACCAGCTGCTTTACT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTEPLTG*RTSCFT
Trigger: AGTAAAGCAGCTGGTCCTCCAGCCAGTTAAGGGTTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCGTTTCGATTCACCCTaGGTAGGTGTAGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRFDSP*VGVEVS
Trigger: ACTGACCTCTACACCTACCCAGGGTGAATCGAAACG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCTGCAGTACCACCTTaGCTGGTACTGAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTAAVPP*LVLKVF
Trigger: AAAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTGAGCGTCTCTTCTaGATGCTGCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFERLF*MLLSSS
Trigger: AGATGAAGAAAGCAGCATTCAGAAGAGACGCTCAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTTAACTTGGCGGTTTaGGCGTCTCTTCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLNLAV*ASLLNA
Trigger: AGCATTCAGAAGAGACGCTCAAACCGCCAAGTTAAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTTCTTCATCATCTGTaGTCTTTATATCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELLHHL*SLYPGP
Trigger: AGGACCTGGATATAAAGATCACAGATGATGAAGAAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTCTTCATCATCTGTaGTCTTTATATCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLLHHL*SLYPGP
Trigger: AGGACCTGGATATAAAGATCACAGATGATGAAGAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTTCTTCATCATCTGTaGTCTTTATATCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELLHHL*SLYPGP
Trigger: AGGACCTGGATATAAAGATCACAGATGATGAAGAAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAAGAAGTGTCTCATCTaGGCCATTTTGGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMKKCLI*AILVLK
Trigger: CTTCAAAACCAAAATGGCTCAGATGAGACACTTCTT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAAGAAGTGTCTCATCTaGGCCATTTTGGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREKKCLI*AILVLK
Trigger: CTTCAAAACCAAAATGGCTCAGATGAGACACTTCTT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCCTTGTCAATACTGTaGGACTCATCCAATATCCTA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSLSIL*DSSNIL
Trigger: TAGGATATTGGATGAGTCTCACAGTATTGACAAGGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCCTTGTCAATACTGTaGGACTCATCCAATATCCTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSLSIL*DSSNIL
Trigger: TAGGATATTGGATGAGTCTCACAGTATTGACAAGGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCCTTGTCAATACTGTaGGACTCATCCAATATCCTA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSLSIL*DSSNIL
Trigger: TAGGATATTGGATGAGTCTCACAGTATTGACAAGGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCATCTCAAAAGTGGTaGTCAGAGCGTCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESSQKW*SERQTC
Trigger: ACAAGTTTGACGCTCTGATCACCACTTTTGAGATGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGATCCCCAAAGTCCTTaGGAAACTCTGATTCTGAGG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTDPQSP*ETLILR
Trigger: CCTCAGAATCAGAGTTTCTCAAGGACTTTGGGGATC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCATGGCCTGTAGCTTTTaGACCTGTTCCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTMACSF*TCSSVL
Trigger: CAAGACAGAGGAACAGGTTCAAAAGCTACAGGCCAT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAATTATTCTTGCTGTTaGGCAGATCCATGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTNYSCC*ADPCLG
Trigger: ACCTAGACATGGATCTGCTCAACAGCAAGAATAATT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAATTATTCTTGCTGTTaGGCAGATCCATGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLNYSCC*ADPCLG
Trigger: ACCTAGACATGGATCTGCTCAACAGCAAGAATAATT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAATTATTCTTGCTGTTaGGCAGATCCATGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRENYSCC*ADPCLG
Trigger: ACCTAGACATGGATCTGCTCAACAGCAAGAATAATT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAATTATTCTTGCTGTTaGGCAGATCCATGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMNYSCC*ADPCLG
Trigger: ACCTAGACATGGATCTGCTCAACAGCAAGAATAATT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAGTACCTTGTTACACTaGTGTTTCAAGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSTLLH*CFKCFL
Trigger: TAAGAAGCACTTGAAACATCAGTGTAACAAGGTACT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGTACCTTGTTACACTaGTGTTTCAAGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSTLLH*CFKCFL
Trigger: TAAGAAGCACTTGAAACATCAGTGTAACAAGGTACT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTCCCCTTCTTCTTATaGAACAGTGGATGTCCATCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFPFFL*NSGCPS
Trigger: AGATGGACATCCACTGTTTCATAAGAAGAAGGGGAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTCTGGTGTTCCAATCTaGGGTTTTCCTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSGVPI*GFPPFL
Trigger: CAGGAATGGAGGAAAACCGCAGATTGGAACACCAGA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTCTCTTCTGAATGCTaGTTTCTTCATCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVSSEC*FLHLLE
Trigger: CTCGAGAAGATGAAGAAAGCAGCATTCAGAAGAGAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTTTTAGCTCCCATGTaGTATCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLLAPM*YPHRAE
Trigger: CTCTGCCCTATGAGGATAGCACATGGGAGCTAAAAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTCTCATCAGCCAGGATaGAGTTCTGCCTGTTATACC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSHQPG*SSACYT
Trigger: GGTATAACAGGCAGAACTGCATCCTGGCTGATGAGA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGAAGGGACCATGGATaGCCACATTATATACTTCCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERRDHG*PHYILP
Trigger: AGGAAGTATATAATGTGGGCATCCATGGTCCCTTCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGTCCCCGTGAATCTTTaGAGTACATTTCATACTGTT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMVPVNL*STFHTV
Trigger: AACAGTATGAAATGTACTGCAAAGATTCACGGGGAC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTCCCCGTGAATCTTTaGAGTACATTTCATACTGTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVPVNL*STFHTV
Trigger: AACAGTATGAAATGTACTGCAAAGATTCACGGGGAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGTCCCCGTGAATCTTTaGAGTACATTTCATACTGTT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREVPVNL*STFHTV
Trigger: AACAGTATGAAATGTACTGCAAAGATTCACGGGGAC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTCCCCGTGAATCTTTaGAGTACATTTCATACTGTT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVPVNL*STFHTV
Trigger: AACAGTATGAAATGTACTGCAAAGATTCACGGGGAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGACTATCAAGCAGCTTaGAATTACGGTTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTDYQAA*NYGFSV
Trigger: GACTGAAAAACCGTAATTGCAAGCTGCTTGATAGTC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGACTATCAAGCAGCTTaGAATTACGGTTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREDYQAA*NYGFSV
Trigger: GACTGAAAAACCGTAATTGCAAGCTGCTTGATAGTC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGTTCCAGGTCCATGTaGTTGAGACTATCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTCSRSM*LRLSSS
Trigger: GCTGCTTGATAGTCTCAAGCACATGGACCTGGAACA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGGATCAATTCGATGACATCGTaGCTGGGCCTGCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: TLIILVLWGTLEWFIFRINSMTS*LGLQVI
Trigger: AATGACCTGCAGGCCCAGGCACGATGTCATCGAATT...GATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR GCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTTCCGGATCCAATCTaGCTTATGGATATCAAAAGT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFPDPI*LMDIKS
Trigger: ACTTTTGATATCCATAAGGCAGATTGGATCCGGAAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACAACACTCGATGTTCTaGTGCAATTGCTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEQHSMF*CNCFVI
Trigger: GATGACAAAGCAATTGCAGCAGAACATCGAGTGTTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTGTTTCTCCCGCCGTaGAATTTCTTTCAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELFLPP*NFFQLE
Trigger: TTCAAGCTGAAAGAAATTGCACGGCGGGAGAAACAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCGCCATCAACTTGTaGTTCTGGAATGTTAACTTC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFAINL*FWNVNF
Trigger: GAAGTTAACATTCCAGAAGCACAAGTTGATGGCGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTCGCCATCAACTTGTaGTTCTGGAATGTTAACTTC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREFAINL*FWNVNF
Trigger: GAAGTTAACATTCCAGAAGCACAAGTTGATGGCGAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTCGCCATCAACTTGTaGTTCTGGAATGTTAACTTC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFAINL*FWNVNF
Trigger: GAAGTTAACATTCCAGAAGCACAAGTTGATGGCGAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGGCTCTTGGAGACTTaGAAAAGTCCTGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTWLLET*KSPDVG
Trigger: GCCAACATCAGGACTTTTGCAAGTCTCCAAGAGCCA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGTTGGTTGAGTCAATaGATCCATTGTCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGWLSQ*IHCPQG
Trigger: TCCTTGGGGACAATGGATGCATTGACTCAACCAACC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGAACCACAGATGCCTaGCATCACACCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRTTDA*HHTWLI
Trigger: AATTAGCCAGGTGTGATGGCAGGCATCTGTGGTTCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTCTCTTGCTTCTTCTaGTGTTCCAATCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFSCFF*CSNLRF
Trigger: AAACCGCAGATTGGAACACCAGAAGAAGCAAGAGAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCACAAAGAACTGCATaGAAGGCAAAGTCTCGCCAT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPQRTA*KAKSRH
Trigger: ATGGCGAGACTTTGCCTTCCATGCAGTTCTTTGTGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTGCATCTTCTTCACTaGGATTCTCCACAAAGAACT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELHLLH*DSPQRT
Trigger: AGTTCTTTGTGGAGAATCCCAGTGAAGAAGATGCAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTATCCTTCTCTAGTTaGGAGATAGTAGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLSFSS*EIVAHS
Trigger: TGAATGGGCTACTATCTCCCAACTAGAGAAGGATAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTATCCTTCTCTAGTTaGGAGATAGTAGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELSFSS*EIVAHS
Trigger: TGAATGGGCTACTATCTCCCAACTAGAGAAGGATAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTTATCCTTCTCTAGTTaGGAGATAGTAGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLSFSS*EIVAHS
Trigger: TGAATGGGCTACTATCTCCCAACTAGAGAAGGATAA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGTAATTGTGGACAGTaGGGCAATGACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSNCGQ*GNDQEG
Trigger: CCCTTCTTGGTCATTGCCCCACTGTCCACAATTACT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCGGTTTTTCAGTCGATaGGCTTCATCAATGATAACA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRFFSR*ASSMIT
Trigger: TGTTATCATTGATGAAGCCCATCGACTGAAAAACCG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCGGTTTTTCAGTCGATaGGCTTCATCAATGATAACA +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERFFSR*ASSMIT
Trigger: TGTTATCATTGATGAAGCCCATCGACTGAAAAACCG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATATGACCTGCCCCTTTaGAAAGGAAGGAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEYDLPL*KGRRNS
Trigger: AGAATTTCTCCTTCCTTTCCAAAGGGGCAGGTCATA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTGATGAGATATGGGTaGTTGCAGCACTTGCGCAAC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLMRYG*LQHLRN
Trigger: GTTGCGCAAGTGCTGCAACCACCCATATCTCATCAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCACCATTGATGAGATATaGGTGGTTGCAGCACTTGCG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTTIDEI*VVAALA
Trigger: CGCAAGTGCTGCAACCACCCATATCTCATCAATGGT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAAGATCAGAACTTTATaGCCACCAGCTTTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGKIRTL*PPALSF
Trigger: AAAGCTTAAAGCTGGTGGCCATAAAGTTCTGATCTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCGTCTTAACAAGATCTaGTCAATGTCCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRLNKI*SMSSSQ
Trigger: TTGTGAAGAGGACATTGACCAGATCTTGTTAAGACG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCGTCTTAACAAGATCTaGTCAATGTCCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRLNKI*SMSSSQ
Trigger: TTGTGAAGAGGACATTGACCAGATCTTGTTAAGACG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTCAGAGTGCTAAAGTaGCGCGTTTGTTTTCGTACT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFRVLK*RVCFRT
Trigger: AGTACGAAAACAAACGCGCCACTTTAGCACTCTGAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACAGTTGATCCACTACTaGGAACCATATGTCAATCTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEQLIHY*EPYVNL
Trigger: GAGATTGACATATGGTTCCCAGTAGTGGATCAACTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTGGGTCTGCCCTCATaGTATTATATTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELGLPS*YYISHS
Trigger: GCTATGAGAAATATAATACCATGAGGGCAGACCCAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGGATCTTCACAAGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: SSWSFGGPWSGLYSGSSQGGQNK*PGCWVT
Trigger: GGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCC...TTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTCTCCATCTTCATTTaGGAATCCATCTTGGGACAT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREFSIFI*ESILGH
Trigger: ATGTCCCAAGATGGATTCCCAAATGAAGATGGAGAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCTCCATCTTCATTTaGGAATCCATCTTGGGACAT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFSIFI*ESILGH
Trigger: ATGTCCCAAGATGGATTCCCAAATGAAGATGGAGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTCTCCATCTTCATTTaGGAATCCATCTTGGGACAT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFSIFI*ESILGH
Trigger: ATGTCCCAAGATGGATTCCCAAATGAAGATGGAGAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTTCTTATGAAACAGTaGATGTCCATCTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELLMKQ*MSISHY
Trigger: GTAATGGGAGATGGACATCCACTGTTTCATAAGAAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTCTTATGAAACAGTaGATGTCCATCTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLLMKQ*MSISHY
Trigger: GTAATGGGAGATGGACATCCACTGTTTCATAAGAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTTCTTATGAAACAGTaGATGTCCATCTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLLMKQ*MSISHY
Trigger: GTAATGGGAGATGGACATCCACTGTTTCATAAGAAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAACCACCCATCACAAATaGCATAAAAGGCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNETTHHK*HKRQRC
Trigger: GCATCTTTGCCTTTTATGCCATTTGTGATGGGTGGT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCAATCCTCTCATAATTaGGAGCAATCAGGTACATTT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGQSSHN*EQSGTF
Trigger: AAATGTACCTGATTGCTCCCAATTATGAGAGGATTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCAATTGCTTTGTCATCTGGTCGGCCAGCCTTTTCTAGGAAACATAAGGCTGGGGTCTTCAGAGGAAGATaGTGGAACTCCTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: AIALSSGRPAFSRKHKAGVFRGR*WNSCSY
Trigger: GTATGAGCAGGAGTTCCACCATCTTCCTCTGAAGAC...CCCAGCCTTATGTTTCCTAGAAAAGGCTGGCCGACCAGATGACAAAGCAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTTTGGAAAGTTCTGTaGGAGCTGTTTCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLWKVL*ELFPLV
Trigger: CACCAGAGGAAACAGCTCCCACAGAACTTTCCAAAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGAGCTGTGGATTCTTTaGAAAGTTCTGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTELWIL*KVLWEL
Trigger: CAGCTCCCACAGAACTTTCCAAAGAATCCACAGCTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTGGAGCTGGAGCTGTaGATTCTTTGGAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLELEL*ILWKVL
Trigger: CAGAACTTTCCAAAGAATCCACAGCTCCAGCTCCAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCAAGGTTATGGATTCTaGAGCTGGAGCTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTQGYGF*SWSCGF
Trigger: GAATCCACAGCTCCAGCTCCAGAATCCATAACCTTG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGCTGGCAGGCTGAGTaGTATAATCATGCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGWQAE*YNHARL
Trigger: TAACCTTGCATGATTATACCACTCAGCCTGCCAGCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
3UTR CAA 72 bp AGCCTCACTGTCCCACCAAGTTGTTGGAACCTCCAGTaGATCCACTACTGGGAACCATATGTCAATCTCACT +
Preference number: 4 (lower is better)
Translates to: SLTVPPSCWNLQ*IHYWEPYVNLT
Trigger: AGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAAGAAGTGTCTCATCTaGGCCATTTTGGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEKKCLI*AILVLK
Trigger: CTTCAAAACCAAAATGGCTCAGATGAGACACTTCTT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCCTTGTCAATACTGTaGGACTCATCCAATATCCTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESLSIL*DSSNIL
Trigger: TAGGATATTGGATGAGTCTCACAGTATTGACAAGGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTCTGGGTGCCTTGACTaGATCCGTTTAAATTCTCGA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSGCLD*IRLNSR
Trigger: TCGAGAATTTAAACGGATTCAGTCAAGGCACCCAGA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGAGTTCTGGGTGCCTTaGCTGAATCCGTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTEFWVP*LNPFKF
Trigger: GAATTTAAACGGATTCAGTCAAGGCACCCAGAACTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTAACCCCTTCCAACTaGTATTCCCGTAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLTPSN*YSRSWF
Trigger: AAACCAGCTACGGGAATATCAGTTGGAAGGGGTTAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGGATCCATCATCTTCCTCCATaGTGGCTGCATATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TLIILVLWGTLEWFIFRIHHLPP*WLHMLL
Trigger: AAGGAGCATATGCAGCCATCATGGAGGAAGATGATG...GATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGTACCTTGTTACACTaGTGTTTCAAGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSTLLH*CFKCFL
Trigger: TAAGAAGCACTTGAAACATCAGTGTAACAAGGTACT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGTACCTTGTTACACTaGTGTTTCAAGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSTLLH*CFKCFL
Trigger: TAAGAAGCACTTGAAACATCAGTGTAACAAGGTACT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR TCA 90 bp CATCTCCATCAATCACTGAGATCTCCTCATCCATCATCATCAAGGGATCACCCTGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCAT +
Preference number: 4 (lower is better)
Translates to: HLHQSLRSPHPSSSRDHPVGTSS*STTGNH
Trigger: ATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAAC...AGGGTGATCCCTTGATGATGATGGATGAGGAGATCTCAGTGATTGATGGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTCTCGCAATGGCCTCTaGTACAATCCGATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSRNGL*YNPICF
Trigger: AAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTCTCCACAAAGAACTaGATGGAAGGCAAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTFSTKN*MEGKVS
Trigger: CGAGACTTTGCCTTCCATGCAGTTCTTTGTGGAGAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGACTATCAAGCAGCTTaGAATTACGGTTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEDYQAA*NYGFSV
Trigger: GACTGAAAAACCGTAATTGCAAGCTGCTTGATAGTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTTCCGGATCCAATCTaGCTTATGGATATCAAAAGT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFPDPI*LMDIKS
Trigger: ACTTTTGATATCCATAAGGCAGATTGGATCCGGAAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTTCCGGATCCAATCTaGCTTATGGATATCAAAAGT +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFPDPI*LMDIKS
Trigger: ACTTTTGATATCCATAAGGCAGATTGGATCCGGAAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGGCTCAGGTTTTATTaGACCAGTTACATCCACCTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRLRFY*TSYIHL
Trigger: GAGGTGGATGTAACTGGTCCAATAAAACCTGAGCCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCACCTCTACGTAGTCTaGATTAAAGGGCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTHLYVV*IKGLFI
Trigger: GATGAAGAGCCCTTTAATCCAGACTACGTAGAGGTG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTGGCCAGACTGCCATaGTACACAATAGTGTTCATT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLARLP*YTIVFI
Trigger: AATGAACACTATTGTGTACCATGGCAGTCTGGCCAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGGTTTTTCAGTCGATaGGCTTCATCAATGATAACA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERFFSR*ASSMIT
Trigger: TGTTATCATTGATGAAGCCCATCGACTGAAAAACCG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGACCAGCTTTAAGCTTTaGAAGCAACTTGTCAATAAG +
Preference number: 4 (lower is better)
Translates to: NRLCQRLGPALHSLWLMETSFKL*KQLVNK
Trigger: CTTATTGACAAGTTGCTTCCAAAGCTTAAAGCTGGT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACCAGCTTTAAGCTTTaGAAGCAACTTGTCAATAAG +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTSFKL*KQLVNK
Trigger: CTTATTGACAAGTTGCTTCCAAAGCTTAAAGCTGGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAAGATCAGAACTTTATaGCCACCAGCTTTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLKIRTL*PPALSF
Trigger: AAAGCTTAAAGCTGGTGGCCATAAAGTTCTGATCTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAAGATCAGAACTTTATaGCCACCAGCTTTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTKIRTL*PPALSF
Trigger: AAAGCTTAAAGCTGGTGGCCATAAAGTTCTGATCTT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GCCTTCGCCGGTCCCCACGTTCTGCAGCCTCTATCTTCATTTGTTCTCTCTTGTCGTCTTAACAAGATCTaGTCAATGTCCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: AFAGPHVLQPLSSFVLSCRLNKI*SMSSSQ
Trigger: TTGTGAAGAGGACATTGACCAGATCTTGTTAAGACG...ACAAGAGAGAACAAATGAAGATAGAGGCTGCAGAACGTGGGGACCGGCGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGTCTTAACAAGATCTaGTCAATGTCCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERLNKI*SMSSSQ
Trigger: TTGTGAAGAGGACATTGACCAGATCTTGTTAAGACG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp GGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GSPSSSWSFGGPWSGLYSIILVL*GTLEWF
Trigger: AAACCACTCCAAGGTCCCCCAAAGGACCAAGATGAT...TGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCAACTTGTGCTTCTaGAATGTTAACTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGINLCF*NVNFNP
Trigger: AGGATTGAAGTTAACATTCCAGAAGCACAAGTTGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTTCTTATGAAACAGTaGATGTCCATCTCCCATTAC +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELLMKQ*MSISHY
Trigger: GTAATGGGAGATGGACATCCACTGTTTCATAAGAAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCAATCCTCTCATAATTaGGAGCAATCAGGTACATTT +
Preference number: 4 (lower is better)
Translates to: QRLGPALHSLWLMEVTREQSSHN*EQSGTF
Trigger: AAATGTACCTGATTGCTCCCAATTATGAGAGGATTG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAATCATGCAAGGTTATaGATTCTGGAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTNHARL*ILELEL
Trigger: CAGCTCCAGCTCCAGAATCCATAACCTTGCATGATT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTATTACCAGAGACAATaGAAACACCTGGTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTYYQRQ*KHLVEG
Trigger: CCCTTCGACCAGGTGTTTCCATTGTCTCTGGTAATA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTTGAGCGTCTCTTCTaGATGCTGCTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTFERLF*MLLSSS
Trigger: AGATGAAGAAAGCAGCATTCAGAAGAGACGCTCAAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTCATCTCAAAAGTGGTaGTCAGAGCGTCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSSQKW*SERQTC
Trigger: ACAAGTTTGACGCTCTGATCACCACTTTTGAGATGA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGTACCTTGTTACACTaGTGTTTCAAGTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESTLLH*CFKCFL
Trigger: TAAGAAGCACTTGAAACATCAGTGTAACAAGGTACT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTCTCTTCTGAATGCTaGTTTCTTCATCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVSSEC*FLHLLE
Trigger: CTCGAGAAGATGAAGAAAGCAGCATTCAGAAGAGAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGAAGGGACCATGGATaGCCACATTATATACTTCCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRRDHG*PHYILP
Trigger: AGGAAGTATATAATGTGGGCATCCATGGTCCCTTCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTCCGGATCCAATCTaGCTTATGGATATCAAAAGT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFPDPI*LMDIKS
Trigger: ACTTTTGATATCCATAAGGCAGATTGGATCCGGAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTCTCTTGCTTCTTCTaGTGTTCCAATCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTFSCFF*CSNLRF
Trigger: AAACCGCAGATTGGAACACCAGAAGAAGCAAGAGAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTGCATCTTCTTCACTaGGATTCTCCACAAAGAACT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLHLLH*DSPQRT
Trigger: AGTTCTTTGTGGAGAATCCCAGTGAAGAAGATGCAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCACCAAGAAGGGACCATaGATGCCCACATTATATACT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTTKKGP*MPTLYT
Trigger: AGTATATAATGTGGGCATCCATGGTCCCTTCTTGGT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTATGACCTGCCCCTTTaGAAAGGAAGGAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTYDLPL*KGRRNS
Trigger: AGAATTTCTCCTTCCTTTCCAAAGGGGCAGGTCATA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAACCAGCTTTAAGCTTTaGAAGCAACTTGTCAATAAG +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNETSFKL*KQLVNK
Trigger: CTTATTGACAAGTTGCTTCCAAAGCTTAAAGCTGGT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAAGATCAGAACTTTATaGCCACCAGCTTTAAGCTTT +
Preference number: 4 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEKIRTL*PPALSF
Trigger: AAAGCTTAAAGCTGGTGGCCATAAAGTTCTGATCTT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp ATGTTTAAAGACTCCAATGAGCAGCGACTTGTCAGCCTCACTGTCCCACCAAGTAACACCTTTTCTGCTTaGTCTCCAATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: MFKDSNEQRLVSLTVPPSNTFSA*SPITSC
Trigger: GCAGGAGGTTATTGGAGACCAAGCAGAAAAGGTGTT...ACTTGGTGGGACAGTGAGGCTGACAAGTCGCTGCTCATTGGAGTCTTTAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp AACCTCCAGTTGATCCACTACTGGGAACCATATGTCAATCTCACTGGCAATCGCTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: NLQLIHYWEPYVNLTGNRWGTLE*FIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCA...GCGATTGCCAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp TGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTGCAATTGCTTTGTCATCTGGGCTGTTGGGTCACCTaGGCTTCATCTCCATCAATC +
Preference number: 4 (lower is better)
Translates to: CQRSYPTLDVLLQLLCHLGCWVT*ASSPSI
Trigger: GATTGATGGAGATGAAGCCCAGGTGACCCAACAGCC...CAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGATCAACTTGTGCTTCTaGAATGTTAACTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMINLCF*NVNFNP
Trigger: AGGATTGAAGTTAACATTCCAGAAGCACAAGTTGAT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATCAACTTGTGCTTCTaGAATGTTAACTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: RARVNENTAAAQAMGPMLINLCF*NVNFNP
Trigger: AGGATTGAAGTTAACATTCCAGAAGCACAAGTTGAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CCA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATCAACTTGTGCTTCTaGAATGTTAACTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTINLCF*NVNFNP
Trigger: AGGATTGAAGTTAACATTCCAGAAGCACAAGTTGAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
3UTR CAA 72 bp CAGAGAAGTTATCCAACACTCGATGTTCTGCTGCAATaGCTTTGTCATCTGGTCGGCCAGCCTTTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: QRSYPTLDVLLQ*LCHLVGQPFLG
Trigger: TCCTAGAAAAGGCTGGCCGACCAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTTCTTCATCATCTGTaGTCTTTATATCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLLHHL*SLYPGP
Trigger: AGGACCTGGATATAAAGATCACAGATGATGAAGAAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAAGAAGTGTCTCATCTaGGCCATTTTGGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTKKCLI*AILVLK
Trigger: CTTCAAAACCAAAATGGCTCAGATGAGACACTTCTT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTCCTTGTCAATACTGTaGGACTCATCCAATATCCTA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSLSIL*DSSNIL
Trigger: TAGGATATTGGATGAGTCTCACAGTATTGACAAGGA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR TCA 90 bp CTGCAATTGCTTTGTCATCTGGTCGGCCAGCCTTTTCTAGGAAACATAAGGCTGATCTCCATCAATCACTaGGATCTCCTCATCCATCAT +
Preference number: 4 (lower is better)
Translates to: LQLLCHLVGQPFLGNIRLISINH*DLLIHH
Trigger: ATGATGGATGAGGAGATCTCAGTGATTGATGGAGAT...CAGCCTTATGTTTCCTAGAAAAGGCTGGCCGACCAGATGACAAAGCAATTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTCCCCGTGAATCTTTaGAGTACATTTCATACTGTT +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVPVNL*STFHTV
Trigger: AACAGTATGAAATGTACTGCAAAGATTCACGGGGAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR GCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGACTATCAAGCAGCTTaGAATTACGGTTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTDYQAA*NYGFSV
Trigger: GACTGAAAAACCGTAATTGCAAGCTGCTTGATAGTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTATCCTTCTCTAGTTaGGAGATAGTAGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLSFSS*EIVAHS
Trigger: TGAATGGGCTACTATCTCCCAACTAGAGAAGGATAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CCA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCGGTTTTTCAGTCGATaGGCTTCATCAATGATAACA +
Preference number: 4 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRFFSR*ASSMIT
Trigger: TGTTATCATTGATGAAGCCCATCGACTGAAAAACCG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645140.1
3UTR CAA 72 bp GGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTaGGAGTGGTTTATATTCAGGATCTTCACAATCTTT +
Preference number: 4 (lower is better)
Translates to: GITLIILVLWGT*EWFIFRIFTIF
Trigger: AAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CAA 72 bp TCATCATCAAGGGATCACCCTCATCATCTTGGTCCTTaGGGGGACCTTGGAGTGGTTTATATTCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: SSSRDHPHHLGP*GDLGVVYIQDL
Trigger: AAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR TCA 90 bp CATTCGTACCCGCAACAGTACCTTGTTACACTGATGTTTCAAGTGCTTCTTATACGACCACTCATGGATTaGAGCACAGCCTTATCCAAC +
Preference number: 4 (lower is better)
Translates to: HSYPQQYLVTLMFQVLLIRPLMD*STALSN
Trigger: GTTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCG...TATAAGAAGCACTTGAAACATCAGTGTAACAAGGTACTGTTGCGGGTACGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR GCA 90 bp AAGTTGTTGGAACCTCCAGTTGATCCACTACTGGGAACCATATGTCAATCTCACCACTCGATGTTCTGCTaGAATTGCTTTGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: KLLEPPVDPLLGTICQSHHSMFC*NCFVIW
Trigger: CCAGATGACAAAGCAATTGCAGCAGAACATCGAGTG...GTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR GCA 90 bp AGATCTCCTCATCCATCATCATCAAGGGATCACCCTCATCATCTTGGTCCTTTGCAACACTCGATGTTCTaGTGCAATTGCTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: RSPHPSSSRDHPHHLGPLQHSMF*CNCFVI
Trigger: GATGACAAAGCAATTGCAGCAGAACATCGAGTGTTG...CAAAGGACCAAGATGATGAGGGTGATCCCTTGATGATGATGGATGAGGAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp ACCCCTTCTACTATGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTGCAATTGGATTCCAGTCTTCATaGAGCAAGATGGCTACGTCT +
Preference number: 4 (lower is better)
Translates to: TPSTMSEKLSNTRCSAAIGFQSS*SKMATS
Trigger: AGACGTAGCCATCTTGCTCCATGAAGACTGGAATCC...AATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACATAGTAGAAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CAA 72 bp AAGTTATCCAACACTCGATGTTCTGCTGCAATTGCTTaGTCATCTGGTCGGCCAGCCTTTTCTAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: KLSNTRCSAAIA*SSGRPAFSRKH
Trigger: ATGTTTCCTAGAAAAGGCTGGCCGACCAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR GCA 90 bp ACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGGATCTTTCCGGATCCAATCTaGCTTATGGATATCAAAAGT +
Preference number: 4 (lower is better)
Translates to: TLIILVLWGTLEWFIFRIFPDPI*LMDIKS
Trigger: ACTTTTGATATCCATAAGGCAGATTGGATCCGGAAA...GATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR GCA 90 bp ATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGGATCTTCACATTGTTTCTCCCGCCGTaGAATTTCTTTCAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: IILVLWGTLEWFIFRIFTLFLPP*NFFQLE
Trigger: TTCAAGCTGAAAGAAATTGCACGGCGGGAGAAACAA...TGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CCA 90 bp CATCTTGGAACAAAGTGTCAGGGTTATATTTCCGGATCCAATCTGCCTTATGGACTGGGTCTGCCCTCATaGTATTATATTTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: HLGTKCQGYISGSNLPYGLGLPS*YYISHS
Trigger: GCTATGAGAAATATAATACCATGAGGGCAGACCCAG...TCCATAAGGCAGATTGGATCCGGAAATATAACCCTGACACTTTGTTCCAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
3UTR CAA 72 bp ACACTGATGTTTCAAGTGCTTCTTATAACTTTCATCTaGGAACAAAGTGTCAGGGTTATATTTCCGGATCCA +
Preference number: 4 (lower is better)
Translates to: TLMFQVLLITFI*EQSVRVIFPDP
Trigger: TGGATCCGGAAATATAACCCTGACACTTTGTTCCAAGATGAAAGTTATAAGAAGCACTTGAAACATCAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS GCA 90 bp CTGGCTGGAGGACCAGCTGCTTTACTGGTCGGCTGGGCTGGACAATaGGCTGAACAGCAGCCTGGTTCCCAGGGACCTTGGCGGCCAACA +
Preference number: 5 (lower is better)
Translates to: LAGGPAALLVGWAGQ*AEQQPGSQGPWRPT
Trigger: TGTTGGCCGCCAAGGTCCCTGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCCCAGCCGACCAGTAAAGCAGCTGGTCCTCCAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS TCA 90 bp GCAATGTTAGGGCGGAAGCTGCAGGCCGAGAGGCCCGACAAGCCCTaGAGGAGAAAACGAGCTGTGCCTCACCCCAGTGGAGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: AMLGRKLQAERPDKP*RRKRAVPHPSGGER
Trigger: CCTCTCTCCTCCACTGGGGTGAGGCACAGCTCGTTTTCTCCTTCAGGGCTTGTCGGGCCTCTCGGCCTGCAGCTTCCGCCCTAACATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553283.1
CDS TCA 90 bp AGGCTTCAGTGGGGGCCCTGTGGCCCCAGGGTTTCCAGCAGGAGCTaGACCCTTAACTGGCTGGAGGACCAGCTGCTTTACTGGTCGGCT +
Preference number: 5 (lower is better)
Translates to: RLQWGPCGPRVSSRS*TLNWLEDQLLYWSA
Trigger: AGCCGACCAGTAAAGCAGCTGGTCCTCCAGCCAGTTAAGGGTTCAGCTCCTGCTGGAAACCCTGGGGCCACAGGGCCCCCACTGAAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 90 bp GGGCGCAGGGGCAGTGGTGAGGCAGTGCGTGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAGCGTGACAAGGATGGAGCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: GRRGSGEAVREVYCW*SSGVEQRDKDGAGA
Trigger: AGCACCAGCTCCATCCTTGTCACGCTGCTCTACTCCACTGCTGCACCAGCAGTATACCTCACGCACTGCCTCACCACTGCCCCTGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp TGCAGGCCGAGAGGCCCGACAAGCCCTGAAGGAGAAAACGAGCTGTaGCTCACCCCAGTGGAGGAGAGAGGTGGCTTTACCTGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: CRPRGPTSPEGENEL*LTPVEERGGFTCSG
Trigger: GCCACTGCAGGTAAAGCCACCTCTCTCCTCCACTGGGGTGAGGCACAGCTCGTTTTCTCCTTCAGGGCTTGTCGGGCCTCTCGGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553283.1
CDS TCA 90 bp TGGAGGACCAGCTGCTTTACTGGTCGGCTGGGCTGGACAATGCGCTaGACAGCAGCCTGGTTCCCAGGGACCTTGGCGGCCAACACTGTA +
Preference number: 5 (lower is better)
Translates to: WRTSCFTGRLGWTMR*TAAWFPGTLAANTV
Trigger: TACAGTGTTGGCCGCCAAGGTCCCTGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCCCAGCCGACCAGTAAAGCAGCTGGTCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 90 bp GCATCTGGGCGCAGGGGCAGTGGTGAGGCAGTGCGTGAGGTATACTaGTGGTGCAGCAGTGGAGTAGAGCAGCGTGACAAGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: ASGRRGSGEAVREVY*WCSSGVEQRDKDGA
Trigger: AGCTCCATCCTTGTCACGCTGCTCTACTCCACTGCTGCACCAGCAGTATACCTCACGCACTGCCTCACCACTGCCCCTGCGCCCAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp TCTGGGCGCAGGGGCAGTGGTGAGGCAGTGCGTGAGGTATACTGCTaGTGCAGCAGTGGAGTAGAGCAGCGTGACAAGGATGGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SGRRGSGEAVREVYC*CSSGVEQRDKDGAG
Trigger: ACCAGCTCCATCCTTGTCACGCTGCTCTACTCCACTGCTGCACCAGCAGTATACCTCACGCACTGCCTCACCACTGCCCCTGCGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCCAGAAGAGGCCCCTaGGGAAGAGCCAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPRRGP*GRASLW
Trigger: CCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCCAGAAGAGGCCCCTaGGGAAGAGCCAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPRRGP*GRASLW
Trigger: CCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp CCCTTTCACTCAAGTCACCTGGGTAGGTGTAGAGGTCAGTGTAACTaGAGGCTTCAGTGGGGGCCCTGTGGCCCCAGGGTTTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PFHSSHLGRCRGQCN*RLQWGPCGPRVSSR
Trigger: CCTGCTGGAAACCCTGGGGCCACAGGGCCCCCACTGAAGCCTGCAGTTACACTGACCTCTACACCTACCCAGGTGACTTGAGTGAAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS GCA 90 bp GATGCGTTTCGATTCACCCTGGGTAGGTGTAGAGGTCAGTGTAACTaGAGGCTTCAGTGGGGGCCCTGTGGCCCCAGGGTTTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: DAFRFTLGRCRGQCN*RLQWGPCGPRVSSR
Trigger: CCTGCTGGAAACCCTGGGGCCACAGGGCCCCCACTGAAGCCTGCAGTTACACTGACCTCTACACCTACCCAGGGTGAATCGAAACGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCCAGAAGAGGCCCCTaGGGAAGAGCCAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPRRGP*GRASLW
Trigger: CCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCCCAGAAGAGGCCCCTaGGGAAGAGCCAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTPRRGP*GRASLW
Trigger: CCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGGG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS TCA 90 bp CCCAGGCTAGAGTGCAGTGGCTATTCACAGGCACAACACTACTGCTaGTCAGCAAGGGAGTGCTGCCCTGCTCCGTTTCCAACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PRLECSGYSQAQHYC*SARECCPAPFPTWA
Trigger: GGCCCAGGTTGGAAACGGAGCAGGGCAGCACTCCCTTGCTGATCAGCAGTAGTGTTGTGCCTGTGAATAGCCACTGCACTCTAGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS GCA 90 bp GGTGAACTGGGCTGCCGCTGTGCTGACTGCAGATGCTTCCTCCTCTaGCATGGAAGCTGCACTACTACTTCGTGGTGTGGGGACTGGAGA +
Preference number: 5 (lower is better)
Translates to: GELGCRCADCRCFLL*HGSCTTTSWCGDWR
Trigger: TCTCCAGTCCCCACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCCAGTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp GCATCCATCCTCACCCACTCTGCAATCTTGCTTACCATCTCCAGCTaGTGGGGGAAGGCGGCATACTTGGCGGCACATGGCCACAAAGCC +
Preference number: 5 (lower is better)
Translates to: ASILTHSAILLTISS*WGKAAYLAAHGHKA
Trigger: GGCTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCCCCCAGCAGCTGGAGATGGTAAGCAAGATTGCAGAGTGGGTGAGGATGGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS GCA 90 bp CCTAGCACAACATGCCGATGTCCTTGGGGACCTCCAGACTGTGGCTaGTGGAGGACCAGGGTGATGCGTTTCGATTCACCCTGGGTAGGT +
Preference number: 5 (lower is better)
Translates to: PSTTCRCPWGPPDCG*WRTRVMRFDSPWVG
Trigger: ACCTACCCAGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGTTGTGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGGAAGGCGGCATACTaGGCGGCACATGGCCACAAA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGKAAY*AAHGHK
Trigger: TTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGATGTTGCAGTCTGTTaGGCTCACCCCATGGCGGGC +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDVAVC*AHPMAG
Trigger: GCCCGCCATGGGGTGAGCCAAACAGACTGCAACATC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGATGTTGCAGTCTGTTaGGCTCACCCCATGGCGGGC +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVDVAVC*AHPMAG
Trigger: GCCCGCCATGGGGTGAGCCAAACAGACTGCAACATC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATGCCTCGGCGAAGTTaGGTGAACTGGGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGMPRRS*VNWAAA
Trigger: AGCGGCAGCCCAGTTCACCAAACTTCGCCGAGGCAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS TCA 90 bp GAGGAGCTTGGTGGGGCCTTAAGGATAACAATCTTAGGGGCTGACTaGGGTGGCTGCCCTCCAGCACTACTGGAGGAGACAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: EELGGALRITILGAD*GGCPPALLEETAVA
Trigger: TGCCACAGCTGTCTCCTCCAGTAGTGCTGGAGGGCAGCCACCTCAGTCAGCCCCTAAGATTGTTATCCTTAAGGCCCCACCAAGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 90 bp CCTAGCACAACATGCCGATGTCCTTGGGGACCTCCAGACTGTGGCTaGTGGAGGACCAGGGTGATGCGTTTCGATTCACCCTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: PSTTCRCPWGPPDCG*WRTRVMRFDSPFME
Trigger: CTCCATGAAGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGTTGTGCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000642518.1
ENST00000645929.1
CDS GCA 90 bp CGAACGCTGGGCAACTCGTCCTCATTTAAGACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCTCTCGCAATGGCCTCTGCTACAATC +
Preference number: 5 (lower is better)
Translates to: RTLGNSSSFKTRGMF*SPRARALAMASATI
Trigger: GATTGTAGCAGAGGCCATTGCGAGAGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGTCTTAAATGAGGACGAGTTGCCCAGCGTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 90 bp CCCAACCATATACCAGGAGATGCTTTTCCACCCGAAAGCAGTCAGTaGGCCCATAGGCATGATGACGGTCATGTCTGCGGGAGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: PNHIPGDAFPPESSQ*AHRHDDGHVCGSVA
Trigger: GGCCACGCTCCCGCAGACATGACCGTCATCATGCCTATGGGCGCACTGACTGCTTTCGGGTGGAAAAGCATCTCCTGGTATATGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 90 bp TCGTTGTTGTTTCTCCCGCCGTGCAATTTCTTTCAGCTTGAAGGCTaGTTCACAACGCCGCCTTCGCCGGTCCCCACGTTCTGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: SLLFLPPCNFFQLEG*FTTPPSPVPTFCSL
Trigger: GAGGCTGCAGAACGTGGGGACCGGCGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGCACGGCGGGAGAAACAACAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 90 bp CATGCCTCGGCGAAGTTTGGTGAACTGGGCTGCCGCTGTGCTGACTaGAGATGCTTCCTCCTCTGCCATGGAAGCTGCACTACTACTTCG +
Preference number: 5 (lower is better)
Translates to: HASAKFGELGCRCAD*RCFLLCHGSCTTTS
Trigger: CGAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp AAGGTCTGGTCGCATCCTACGGGCCCGCTTCTTGCTGCTCTCTGGTaGAATAGGCCCTGGCAAAACCCGGTTGAACACCGTTTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: KVWSHPTGPLLAALW*NRPWQNPVEHRFSV
Trigger: CACACTGAAACGGTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAGCGGGCCCGTAGGATGCGACCAGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp CCTAGCACAACATGCCGATGTCCTTGGGGACCTCCAGACTGTGGCTaGTGGAGGACCAGGGTGATGCGTTTCGATTCACCCTGCTCATAC +
Preference number: 5 (lower is better)
Translates to: PSTTCRCPWGPPDCG*WRTRVMRFDSPCSY
Trigger: GTATGAGCAGGGTGAATCGAAACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGTTGTGCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553283.1
CDS CCA 90 bp TCCATCCTCACCCACTCTGCAATCTTGCTTACCATCTCCAGCTGCTaGGGGAAGGCGGCATACTTGGCGGCACATGGCCACAAAGCCATG +
Preference number: 5 (lower is better)
Translates to: SILTHSAILLTISSC*GKAAYLAAHGHKAM
Trigger: CATGGCTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCCCCCAGCAGCTGGAGATGGTAAGCAAGATTGCAGAGTGGGTGAGGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAACATGCCGATGTCCTaGGGGACCTCCAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVNMPMS*GTSRLW
Trigger: CCACAGTCTGGAGGTCCCCAAGGACATCGGCATGTT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTGGCAGGCTGCCCTaGGGCATTCTTGGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLGRLP*GILGLS
Trigger: ACTCAAGCCAAGAATGCCCAAGGGCAGCCTGCCAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTTGGCAGGCTGCCCTaGGGCATTCTTGGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLGRLP*GILGLS
Trigger: ACTCAAGCCAAGAATGCCCAAGGGCAGCCTGCCAAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCAGCCTGTCGAAGGTaGCCTCTAACTCGCCCATCA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAACRR*PLTRPS
Trigger: TGATGGGCGAGTTAGAGGCAACCTTCGACAGGCTGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGGTCTGAGTCAGGCTaGCTGAAGCGGTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRSESG*LKRSMA
Trigger: TGCCATTGACCGCTTCAGCAAGCCTGACTCAGACCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCAATGAGCAGCGACTaGTCAGCCTCACTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPMSSD*SASLSH
Trigger: GTGGGACAGTGAGGCTGACAAGTCGCTGCTCATTGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCAATTTCTTTCAGCTTGAAGGCTGCTTCACAACGCCGCCTTCGCCGGTCCCCACCAATGAGCAGCGACTaGTCAGCCTCACTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: AISFSLKAASQRRLRRSPPMSSD*SASLSH
Trigger: GTGGGACAGTGAGGCTGACAAGTCGCTGCTCATTGG...TGGGGACCGGCGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGGAAGGCGGCATACTaGGCGGCACATGGCCACAAA +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGKAAY*AAHGHK
Trigger: TTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCCC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGGGAAGGCGGCATACTaGGCGGCACATGGCCACAAA +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREGKAAY*AAHGHK
Trigger: TTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCCC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAAGGCGGCATACTaGGCGGCACATGGCCACAAA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGKAAY*AAHGHK
Trigger: TTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGATGTTGCAGTCTGTTaGGCTCACCCCATGGCGGGC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDVAVC*AHPMAG
Trigger: GCCCGCCATGGGGTGAGCCAAACAGACTGCAACATC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGATGTTGCAGTCTGTTaGGCTCACCCCATGGCGGGC +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMDVAVC*AHPMAG
Trigger: GCCCGCCATGGGGTGAGCCAAACAGACTGCAACATC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCATAGTCTTGTGGGGTaGGTCGGCTCCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEHSLVG*VGSWPP
Trigger: TGGTGGCCAGGAGCCGACCAACCCCACAAGACTATG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCATAGTCTTGTGGGGTaGGTCGGCTCCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHSLVG*VGSWPP
Trigger: TGGTGGCCAGGAGCCGACCAACCCCACAAGACTATG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCATAGTCTTGTGGGGTaGGTCGGCTCCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREHSLVG*VGSWPP
Trigger: TGGTGGCCAGGAGCCGACCAACCCCACAAGACTATG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGATGCCTCGGCGAAGTTaGGTGAACTGGGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREMPRRS*VNWAAA
Trigger: AGCGGCAGCCCAGTTCACCAAACTTCGCCGAGGCAT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATGCCTCGGCGAAGTTaGGTGAACTGGGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLMPRRS*VNWAAA
Trigger: AGCGGCAGCCCAGTTCACCAAACTTCGCCGAGGCAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTCATCCTCCTCAGGTaGCAGTGGTGGCAACCGCAA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVILLR*QWWQPQ
Trigger: TTGCGGTTGCCACCACTGCAACCTGAGGAGGATGAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGCCCGGAGGCCAGAATAAATGGCCTGGCTGTTGGGTCACCTGGGCTTCATCTCATACTGCCGGGGTaGGTGCCAGTAAGGTCCATA +
Preference number: 5 (lower is better)
Translates to: QSPEARINGLAVGSPGLHLILPG*VPVRSI
Trigger: TATGGACCTTACTGGCACCAACCCCGGCAGTATGAG...ATGAAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGGAGTCCAGAGAGCTaGGCAGTCCAAGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRSPES*AVQGLP
Trigger: AGGAAGCCCTTGGACTGCCAAGCTCTCTGGACTCCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS GCA 90 bp TGGCTTGAGTCAGGGCTGCCAGCTGGTTGCCCTGTAACACTATCTTaGCTGGTAGACTCCCTAGCACAACATGCCGATGTCCTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: WLESGLPAGCPVTLS*LVDSLAQHADVLGD
Trigger: GTCCCCAAGGACATCGGCATGTTGTGCTAGGGAGTCTACCAGGCAAGATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGACTCAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000430710.8
ENST00000553283.1
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 90 bp CCCGAAAGCAGTCAGTGCGCCCATAGGCATGATGACGGTCATGTCTaGGGGAGCGTGGCCGCTCATCATCCTCACTTTCCAAATCAGAGA +
Preference number: 5 (lower is better)
Translates to: PESSQCAHRHDDGHV*GSVAAHHPHFPNQR
Trigger: TCTCTGATTTGGAAAGTGAGGATGATGAGCGGCCACGCTCCCGCAGACATGACCGTCATCATGCCTATGGGCGCACTGACTGCTTTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646558.1
ENST00000646647.2
CDS GCA 90 bp TCGGCGAAGTTTGGTGAACTGGGCTGCCGCTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGAAGCTGCACTACTACTTCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: SAKFGELGCRCADCR*FLLCHGSCTTTSWC
Trigger: ACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp CAGAGTTGCTTCTGTTGGCATCCATCCTCACCCACTCTGCAATCTTaGTTACCATCTCCAGCTGCTGGGGGAAGGCGGCATACTTGGCGG +
Preference number: 5 (lower is better)
Translates to: QSCFCWHPSSPTLQS*LPSPAAGGRRHTWR
Trigger: CCGCCAAGTATGCCGCCTTCCCCCAGCAGCTGGAGATGGTAAGCAAGATTGCAGAGTGGGTGAGGATGGATGCCAACAGAAGCAACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS GCA 90 bp GGGAGGCTAAGGCAGGATAATCGTTTGAAACCGGGAGGCAGAGGGTaGAGTAAGCTGAGATCATGCCACTGCACTTCAGGCCTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: GRLRQDNRLKPGGRG*SKLRSCHCTSGLGE
Trigger: CTCACCCAGGCCTGAAGTGCAGTGGCATGATCTCAGCTTACTGCACCCTCTGCCTCCCGGTTTCAAACGATTATCCTGCCTTAGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553651.2
ENST00000643048.1
CDS GCA 90 bp CTTACCCATATACCAGGAGATGCTTTTCCACCCGAAAGCAGTCAGTaGGCCCATAGGCATGATGACGGTCATGTCTGCGGGAGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: LTHIPGDAFPPESSQ*AHRHDDGHVCGSVA
Trigger: GGCCACGCTCCCGCAGACATGACCGTCATCATGCCTATGGGCGCACTGACTGCTTTCGGGTGGAAAAGCATCTCCTGGTATATGGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CCA 90 bp CCCCTCTTAGAAGCTCCCCATCATGCCGAACAGGCTCCCACCATTTaGGCAATTCAGGACCAGGAGGCTGACACAATGCCAGCCGATCTT +
Preference number: 5 (lower is better)
Translates to: PLLEAPHHAEQAPTI*AIQDQEADTMPADL
Trigger: AAGATCGGCTGGCATTGTGTCAGCCTCCTGGTCCTGAATTGCCCAAATGGTGGGAGCCTGTTCGGCATGATGGGGAGCTTCTAAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp TCCTGGCTCCTACGGCTAGAAGGCCACTTCCCTGAGAGTACAGCCTaGCAGACGAGGTCAATACGGTTTATCAGGACACGATCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SWLLRLEGHFPESTA*QTRSIRFIRTRSLG
Trigger: GCCCAAGGATCGTGTCCTGATAAACCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCTAGCCGTAGGAGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp AGAAAGGTCTGGTCGCATCCTACGGGCCCGCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAAAACCCGGTTGAACACCGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: RKVWSHPTGPLLAAL*CNRPWQNPVEHRFS
Trigger: ACTGAAACGGTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAGCGGGCCCGTAGGATGCGACCAGACCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp TGGGCTGGACAATGCGCTGAACAGCAGCCTGGTTCCCAGGGACCTTaGCGGCCAACACTGTATTACCAGAGACAATGGAAACACCTGGTC +
Preference number: 5 (lower is better)
Translates to: WAGQCAEQQPGSQGP*RPTLYYQRQWKHLV
Trigger: GACCAGGTGTTTCCATTGTCTCTGGTAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp CGCCGAAGCCTAGCTGTTAGGGCAGAGCCCGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACCTGGGCTGTGGAAAACAAAGTAGAA +
Preference number: 5 (lower is better)
Translates to: RRSLAVRAEPGGQNK*PGCWVTWAVENKVE
Trigger: TTCTACTTTGTTTTCCACAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCCTAACAGCTAGGCTTCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAACATGCCGATGTCCTaGGGGACCTCCAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTRENMPMS*GTSRLW
Trigger: CCACAGTCTGGAGGTCCCCAAGGACATCGGCATGTT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAACATGCCGATGTCCTaGGGGACCTCCAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLNMPMS*GTSRLW
Trigger: CCACAGTCTGGAGGTCCCCAAGGACATCGGCATGTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAGGGCTGCCAGCTGGTaGCCCTGTAACACTATCTTG +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVRAASW*PCNTIL
Trigger: CAAGATAGTGTTACAGGGCAACCAGCTGGCAGCCCT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTTGGGCATTCTTGGCTaGAGTCAGGGCTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELGILG*SQGCQL
Trigger: CAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCAA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTGGGCATTCTTGGCTaGAGTCAGGGCTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLGILG*SQGCQL
Trigger: CAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTGGGCATTCTTGGCTaGAGTCAGGGCTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELGILG*SQGCQL
Trigger: CAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTGGCAGGCTGCCCTaGGGCATTCTTGGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLGRLP*GILGLS
Trigger: ACTCAAGCCAAGAATGCCCAAGGGCAGCCTGCCAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGATAGTTACTACCTaGGCAGGCTGCCCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWIVTT*AGCPWA
Trigger: TGCCCAAGGGCAGCCTGCCAAGGTAGTAACTATCCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTGGATAGTTACTACCTaGGCAGGCTGCCCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVWIVTT*AGCPWA
Trigger: TGCCCAAGGGCAGCCTGCCAAGGTAGTAACTATCCA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCCAGAAGAGGCCCCTaGGGAAGAGCCAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPRRGP*GRASLW
Trigger: CCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTGTGAGTAGCACCTaGTGTTCCAGGTCCATGTGC +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPVSST*CSRSMC
Trigger: GCACATGGACCTGGAACACAAGGTGCTACTCACAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCTGTGAGTAGCACCTaGTGTTCCAGGTCCATGTGC +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPVSST*CSRSMC
Trigger: GCACATGGACCTGGAACACAAGGTGCTACTCACAGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGGTGGTTGCAGCACTaGCGCAACTCCATCATTGTG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGWLQH*RNSIIV
Trigger: CACAATGATGGAGTTGCGCAAGTGCTGCAACCACCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGCAGCCTGTCGAAGGTaGCCTCTAACTCGCCCATCA +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREAACRR*PLTRPS
Trigger: TGATGGGCGAGTTAGAGGCAACCTTCGACAGGCTGC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCGGTCTGAGTCAGGCTaGCTGAAGCGGTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRSESG*LKRSMA
Trigger: TGCCATTGACCGCTTCAGCAAGCCTGACTCAGACCG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCGGTCTGAGTCAGGCTaGCTGAAGCGGTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMRSESG*LKRSMA
Trigger: TGCCATTGACCGCTTCAGCAAGCCTGACTCAGACCG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCCAATGAGCAGCGACTaGTCAGCCTCACTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTPMSSD*SASLSH
Trigger: GTGGGACAGTGAGGCTGACAAGTCGCTGCTCATTGG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCAATGAGCAGCGACTaGTCAGCCTCACTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPMSSD*SASLSH
Trigger: GTGGGACAGTGAGGCTGACAAGTCGCTGCTCATTGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACGCCTTGTCCATCGTaGTTGTTTCTCCCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTPCPS*LFLPPC
Trigger: GCACGGCGGGAGAAACAACAACGATGGACAAGGCGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTACGCCTTGTCCATCGTaGTTGTTTCTCCCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTTPCPS*LFLPPC
Trigger: GCACGGCGGGAGAAACAACAACGATGGACAAGGCGT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGACGCCTTGTCCATCGTaGTTGTTTCTCCCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTRETPCPS*LFLPPC
Trigger: GCACGGCGGGAGAAACAACAACGATGGACAAGGCGT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGACAGGCTCCCACCATTaGGGCAATTCAGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGTGSHH*GNSGPG
Trigger: TCCTGGTCCTGAATTGCCCAAATGGTGGGAGCCTGT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGGTCCTGCATGATGTaGCAGTCTGTTTGGCTCACC +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGSCMM*QSVWLT
Trigger: GGTGAGCCAAACAGACTGCAACATCATGCAGGACCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACATAGTCTTGTGGGGTaGGTCGGCTCCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEHSLVG*VGSWPP
Trigger: TGGTGGCCAGGAGCCGACCAACCCCACAAGACTATG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCGCATCTCATAGTCTaGTGGGGTTGGTCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSHLIV*WGWSAP
Trigger: AGGAGCCGACCAACCCCACAAGACTATGAGATGCGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCCTCATCCTCCAGTTaGACTGGTGGAACACTCCGG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSSSSS*TGGTLR
Trigger: CCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATCAGGACACGATCCTaGGGCCACTCAGAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIRTRS*GHSEAL
Trigger: AAGAGCCTCTGAGTGGCCCAAGGATCGTGTCCTGAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATGCCTCGGCGAAGTTaGGTGAACTGGGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEMPRRS*VNWAAA
Trigger: AGCGGCAGCCCAGTTCACCAAACTTCGCCGAGGCAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTCATCCTCCTCAGGTaGCAGTGGTGGCAACCGCAA +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVILLR*QWWQPQ
Trigger: TTGCGGTTGCCACCACTGCAACCTGAGGAGGATGAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTCATCCTCCTCAGGTaGCAGTGGTGGCAACCGCAA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVILLR*QWWQPQ
Trigger: TTGCGGTTGCCACCACTGCAACCTGAGGAGGATGAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTCATCCTCCTCAGGTaGCAGTGGTGGCAACCGCAA +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEVILLR*QWWQPQ
Trigger: TTGCGGTTGCCACCACTGCAACCTGAGGAGGATGAC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGTCATCCTCCTCAGGTaGCAGTGGTGGCAACCGCAA +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREVILLR*QWWQPQ
Trigger: TTGCGGTTGCCACCACTGCAACCTGAGGAGGATGAC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGAGTCCAGAGAGCTaGGCAGTCCAAGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTRSPES*AVQGLP
Trigger: AGGAAGCCCTTGGACTGCCAAGCTCTCTGGACTCCT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGTTCCCAGGGACCTaGGCGGCCAACACTGTATTA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGWFPGT*AANTVL
Trigger: TAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACCA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS TCA 90 bp TTGTCCATCGTTGTTGTTTCTCCCGCCGTGCAATTTCTTTCAGCTTaGAGGCTGCTTCACAACGCCGCCTTCGCCGGTCCCCACGTTCTG +
Preference number: 5 (lower is better)
Translates to: LSIVVVSPAVQFLSA*RLLHNAAFAGPHVL
Trigger: CAGAACGTGGGGACCGGCGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGCACGGCGGGAGAAACAACAACGATGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 90 bp TGCCGCTGTGCTGACTGCAGATGCTTCCTCCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGTGGGGACTGGAGAGTCACCATATTC +
Preference number: 5 (lower is better)
Translates to: CRCADCRCFLLCHGS*TTTSWCGDWRVTIF
Trigger: GAATATGGTGACTCTCCAGTCCCCACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp AAACTCCTTTTCATCCATGCCTCGGCGAAGTTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGATGCTTCCTCCTCTGCCATGGAAGC +
Preference number: 5 (lower is better)
Translates to: KLLFIHASAKFGELG*RCADCRCFLLCHGS
Trigger: GCTTCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAGGCATGGATGAAAAGGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp GTCAGTGCGCCCATAGGCATGATGACGGTCATGTCTGCGGGAGCGTaGCCGCTCATCATCCTCACTTTCCAAATCAGAGAATTCCACCAG +
Preference number: 5 (lower is better)
Translates to: VSAPIGMMTVMSAGA*PLIILTFQIREFHQ
Trigger: CTGGTGGAATTCTCTGATTTGGAAAGTGAGGATGATGAGCGGCCACGCTCCCGCAGACATGACCGTCATCATGCCTATGGGCGCACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646558.1
ENST00000646647.2
CDS CCA 90 bp AGGGGGATACTCGCATCTCATAGTCTTGTGGGGTTGGTCGGCTCCTaGCCACCACCTCGTGCTCTAGCTTTAAAGTCAGACTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: RGILASHSLVGLVGS*PPPRALALKSDSPD
Trigger: GTCTGGAGAGTCTGACTTTAAAGCTAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCCCACAAGACTATGAGATGCGAGTATCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp AGCAAGTGGTTGCCTGGCCCCAAAATTCCTCCTGTTACCATTTCCTaGCTCCTACGGCTAGAAGGCCACTTCCCTGAGAGTACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: SKWLPGPKIPPVTIS*LLRLEGHFPESTAW
Trigger: CCAGGCTGTACTCTCAGGGAAGTGGCCTTCTAGCCGTAGGAGCCAGGAAATGGTAACAGGAGGAATTTTGGGGCCAGGCAACCACTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp CGCTGTGATGGTAGGATGCAGCAGACACTGATAAGGCAGCTCCCCTaGCTTGTGTTTGGGGCGCTCCGCTGTTTATTCTGTGCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: RCDGRMQQTLIRQLP*LVFGALRCLFCASP
Trigger: AGGACTTGCACAGAATAAACAGCGGAGCGCCCCAAACACAAGCCAGGGGAGCTGCCTTATCAGTGTCTGCTGCATCCTACCATCACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556833.1
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAACATGCCGATGTCCTaGGGGACCTCCAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNENMPMS*GTSRLW
Trigger: CCACAGTCTGGAGGTCCCCAAGGACATCGGCATGTT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCCTGTAACACTATCTaGCCTGGTAGACTCCCTAGC +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPCNTI*PGRLPS
Trigger: GCTAGGGAGTCTACCAGGCAAGATAGTGTTACAGGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGGGCTGCCAGCTGGTaGCCCTGTAACACTATCTTG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRAASW*PCNTIL
Trigger: CAAGATAGTGTTACAGGGCAACCAGCTGGCAGCCCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGCTGCCAGCTGGTaGCCCTGTAACACTATCTTG +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTRAASW*PCNTIL
Trigger: CAAGATAGTGTTACAGGGCAACCAGCTGGCAGCCCT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAGGGCTGCCAGCTGGTaGCCCTGTAACACTATCTTG +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMERAASW*PCNTIL
Trigger: CAAGATAGTGTTACAGGGCAACCAGCTGGCAGCCCT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTGGGCATTCTTGGCTaGAGTCAGGGCTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELGILG*SQGCQL
Trigger: CAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGATAGTTACTACCTaGGCAGGCTGCCCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWIVTT*AGCPWA
Trigger: TGCCCAAGGGCAGCCTGCCAAGGTAGTAACTATCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGACGATTCACCCTTTaGAGTTCTGGGTGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGRFTL*SSGCLD
Trigger: GTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATTTCTTCCAGGCACTaGCCTGCGGACGATTCACCC +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEISSRH*PADDSP
Trigger: GGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATTTCTTCCAGGCACTaGCCTGCGGACGATTCACCC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLISSRH*PADDSP
Trigger: GGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGATTTCTTCCAGGCACTaGCCTGCGGACGATTCACCC +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREISSRH*PADDSP
Trigger: GGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAAT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATTTCTTCCAGGCACTaGCCTGCGGACGATTCACCC +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTISSRH*PADDSP
Trigger: GGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCTGTGAGTAGCACCTaGTGTTCCAGGTCCATGTGC +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPVSST*CSRSMC
Trigger: GCACATGGACCTGGAACACAAGGTGCTACTCACAGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCTGTGAGTAGCACCTaGTGTTCCAGGTCCATGTGC +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPVSST*CSRSMC
Trigger: GCACATGGACCTGGAACACAAGGTGCTACTCACAGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGGTGGTTGCAGCACTaGCGCAACTCCATCATTGTG +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGWLQH*RNSIIV
Trigger: CACAATGATGGAGTTGCGCAAGTGCTGCAACCACCC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGGTTGCAGCACTaGCGCAACTCCATCATTGTG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGWLQH*RNSIIV
Trigger: CACAATGATGGAGTTGCGCAAGTGCTGCAACCACCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATGAGATATGGGTGGTaGCAGCACTTGCGCAACTCC +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGMRYGW*QHLRNS
Trigger: GGAGTTGCGCAAGTGCTGCAACCACCCATATCTCAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCAGCCTGTCGAAGGTaGCCTCTAACTCGCCCATCA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEAACRR*PLTRPS
Trigger: TGATGGGCGAGTTAGAGGCAACCTTCGACAGGCTGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGGTCTGAGTCAGGCTaGCTGAAGCGGTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERSESG*LKRSMA
Trigger: TGCCATTGACCGCTTCAGCAAGCCTGACTCAGACCG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCATCATCTTGGTCCTTaGGGGGACCTTGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVHHLGP*GDLGVV
Trigger: AACCACTCCAAGGTCCCCCAAAGGACCAAGATGATG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCTTGTCCATCGTTGTaGTTTCTCCCGCCGTGCAAT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPCPSL*FLPPCN
Trigger: ATTGCACGGCGGGAGAAACAACAACGATGGACAAGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAACGCCTTGTCCATCGTaGTTGTTTCTCCCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNETPCPS*LFLPPC
Trigger: GCACGGCGGGAGAAACAACAACGATGGACAAGGCGT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTACAGGCTCCCACCATTaGGGCAATTCAGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTTGSHH*GNSGPG
Trigger: TCCTGGTCCTGAATTGCCCAAATGGTGGGAGCCTGT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGACAGGCTCCCACCATTaGGGCAATTCAGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMETGSHH*GNSGPG
Trigger: TCCTGGTCCTGAATTGCCCAAATGGTGGGAGCCTGT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCCTGCATGATGTaGCAGTCTGTTTGGCTCACC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGSCMM*QSVWLT
Trigger: GGTGAGCCAAACAGACTGCAACATCATGCAGGACCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGGTCCTGCATGATGTaGCAGTCTGTTTGGCTCACC +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGSCMM*QSVWLT
Trigger: GGTGAGCCAAACAGACTGCAACATCATGCAGGACCC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCGCATCTCATAGTCTaGTGGGGTTGGTCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSHLIV*WGWSAP
Trigger: AGGAGCCGACCAACCCCACAAGACTATGAGATGCGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCCTCATCCTCCAGTTaGACTGGTGGAACACTCCGG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSSSSS*TGGTLR
Trigger: CCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTCCTCATCCTCCAGTTaGACTGGTGGAACACTCCGG +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESSSSS*TGGTLR
Trigger: CCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGGA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTCCTCATCCTCCAGTTaGACTGGTGGAACACTCCGG +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESSSSS*TGGTLR
Trigger: CCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGGA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATCAGGACACGATCCTaGGGCCACTCAGAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEIRTRS*GHSEAL
Trigger: AAGAGCCTCTGAGTGGCCCAAGGATCGTGTCCTGAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATCAGGACACGATCCTaGGGCCACTCAGAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLIRTRS*GHSEAL
Trigger: AAGAGCCTCTGAGTGGCCCAAGGATCGTGTCCTGAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTGTCTAGCAAGTGGTaGCCTGGCCCCAAAATTCCT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLSSKW*PGPKIP
Trigger: AGGAATTTTGGGGCCAGGCAACCACTTGCTAGACAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGGAGTCCAGAGAGCTaGGCAGTCCAAGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERSPES*AVQGLP
Trigger: AGGAAGCCCTTGGACTGCCAAGCTCTCTGGACTCCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCATGAAAGGATTCCCTaGGCTCAGGATCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHERIP*AQDLLA
Trigger: AGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCATG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCATGAAAGGATTCCCTaGGCTCAGGATCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVHERIP*AQDLLA
Trigger: AGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCATG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTGCTGGTGATACCTaGGGCCTGAATTTGTGCCAC +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCAGDT*GLNLCH
Trigger: GTGGCACAAATTCAGGCCCAAGGTATCACCAGCACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGTTCCCAGGGACCTaGGCGGCCAACACTGTATTA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWFPGT*AANTVL
Trigger: TAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS TCA 90 bp TCCTCCATATACGCTAGAAATCGGGGATCAACAGCAAACTCTGGATaGCCCTGTAACCACATCTCCAGTTCAGCCCGGCGAGGGGCATCC +
Preference number: 5 (lower is better)
Translates to: SSIYARNRGSTANSG*PCNHISSSARRGAS
Trigger: GGATGCCCCTCGCCGGGCTGAACTGGAGATGTGGTTACAGGGTCATCCAGAGTTTGCTGTTGATCCCCGATTTCTAGCGTATATGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp ACCGCGGGCACGGGCTCTCGCAATGGCCTCTGCTACAATCCGATTTaGTTTCTCTTGCTTCTTCTGGTGTTCCAATCTGCGGTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: TAGTGSRNGLCYNPI*FLLLLLVFQSAVFL
Trigger: GAGGAAAACCGCAGATTGGAACACCAGAAGAAGCAAGAGAAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTGCCCGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp ACCTCGTGCTCTAGCTTTAAAGTCAGACTCTCCAGACTGGGGACCTaGGTAGCTGTCTCCTCGGGTGACTTTTCAACAGGAGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: TSCSSFKVRLSRLGT*VAVSSGDFSTGASG
Trigger: CCCAGATGCTCCTGTTGAAAAGTCACCCGAGGAGACAGCTACCCAGGTCCCCAGTCTGGAGAGTCTGACTTTAAAGCTAGAGCACGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp GTCCAGCTCAGAGTCCGAATCATCCTCATCCTCCAGTTTGACTGGTaGAACACTCCGGGAAACCAGAGGGGTAGTATCAGAGGGGGATAC +
Preference number: 5 (lower is better)
Translates to: VQLRVRIILILQFDW*NTPGNQRGSIRGGY
Trigger: GTATCCCCCTCTGATACTACCCCTCTGGTTTCCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGGATGATTCGGACTCTGAGCTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp CAAGTCCAGCTCAGAGTCCGAATCATCCTCATCCTCCAGTTTGACTaGTGGAACACTCCGGGAAACCAGAGGGGTAGTATCAGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: QVQLRVRIILILQFD*WNTPGNQRGSIRGG
Trigger: TCCCCCTCTGATACTACCCCTCTGGTTTCCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGGATGATTCGGACTCTGAGCTGGACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp ACTGTAAACTCCTTTTCATCCATGCCTCGGCGAAGTTTGGTGAACTaGGCTGCCGCTGTGCTGACTGCAGATGCTTCCTCCTCTGCCATG +
Preference number: 5 (lower is better)
Translates to: TVNSFSSMPRRSLVN*AAAVLTADASSSAM
Trigger: CATGGCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAGGCATGGATGAAAAGGAGTTTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp CAATCTTGCTTACCATCTCCAGCTGCTGGGGGAAGGCGGCATACTTaGCGGCACATGGCCACAAAGCCATGGAAGTACTTGGTAAGGCTT +
Preference number: 5 (lower is better)
Translates to: QSCLPSPAAGGRRHT*RHMATKPWKYLVRL
Trigger: AAGCCTTACCAAGTACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCCCCCAGCAGCTGGAGATGGTAAGCAAGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS CCA 90 bp TCTGTAAGACAGGTTGGGCTGGCTGCTCCTGGCTGGCAGGCTGAGTaGTATAATCATGCAAGGTTATGGATTCTGGAGCTGGAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SVRQVGLAAPGWQAE*YNHARLWILELELW
Trigger: CCACAGCTCCAGCTCCAGAATCCATAACCTTGCATGATTATACCACTCAGCCTGCCAGCCAGGAGCAGCCAGCCCAACCTGTCTTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCCTGTAACACTATCTaGCCTGGTAGACTCCCTAGC +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPCNTI*PGRLPS
Trigger: GCTAGGGAGTCTACCAGGCAAGATAGTGTTACAGGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCCTGTAACACTATCTaGCCTGGTAGACTCCCTAGC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPCNTI*PGRLPS
Trigger: GCTAGGGAGTCTACCAGGCAAGATAGTGTTACAGGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCCTGTAACACTATCTaGCCTGGTAGACTCCCTAGC +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPCNTI*PGRLPS
Trigger: GCTAGGGAGTCTACCAGGCAAGATAGTGTTACAGGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGATAGTTACTACCTaGGCAGGCTGCCCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWIVTT*AGCPWA
Trigger: TGCCCAAGGGCAGCCTGCCAAGGTAGTAACTATCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTCTTTGTCCTGGGCTTaGTCCTGGTCCCATTATCTG +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVSLSWA*SWSHYL
Trigger: CAGATAATGGGACCAGGACAAAGCCCAGGACAAAGA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGGCTGCAGTACCACCTaGACTGGTACTGAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGGCSTT*TGTESL
Trigger: AAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGCC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAATGAGGAGCAGAGCTaGCTGGTGATGACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGNEEQS*LVMTKL
Trigger: CAGCTTTGTCATCACCAGCAAGCTCTGCTCCTCATT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACAGGAGTGATGGTGTaGAGCTTGCTCTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVTGVMV*SLLLPF
Trigger: AAAGGGCAAGAGCAAGCTCAACACCATCACTCCTGT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGGACGATTCACCCTTTaGAGTTCTGGGTGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEGRFTL*SSGCLD
Trigger: GTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTCC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATTTCTTCCAGGCACTaGCCTGCGGACGATTCACCC +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEISSRH*PADDSP
Trigger: GGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGATCAGAGCGTCAAACTaGTATGCGCCTGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREIRASN*YAPGMR
Trigger: CCTCATCCCAGGCGCATACAAGTTTGACGCTCTGAT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATCAGAGCGTCAAACTaGTATGCGCCTGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLIRASN*YAPGMR
Trigger: CCTCATCCCAGGCGCATACAAGTTTGACGCTCTGAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATCAGAGCGTCAAACTaGTATGCGCCTGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTIRASN*YAPGMR
Trigger: CCTCATCCCAGGCGCATACAAGTTTGACGCTCTGAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCCAGGTCCATGTGCTaGAGACTATCAAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSRSMC*RLSSSL
Trigger: CAAGCTGCTTGATAGTCTCAAGCACATGGACCTGGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGGTGGTTGCAGCACTaGCGCAACTCCATCATTGTG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGWLQH*RNSIIV
Trigger: CACAATGATGGAGTTGCGCAAGTGCTGCAACCACCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATGAGATATGGGTGGTaGCAGCACTTGCGCAACTCC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLMRYGW*QHLRNS
Trigger: GGAGTTGCGCAAGTGCTGCAACCACCCATATCTCAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATGAGATATGGGTGGTaGCAGCACTTGCGCAACTCC +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTMRYGW*QHLRNS
Trigger: GGAGTTGCGCAAGTGCTGCAACCACCCATATCTCAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATGAGATATGGGTGGTaGCAGCACTTGCGCAACTCC +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEMRYGW*QHLRNS
Trigger: GGAGTTGCGCAAGTGCTGCAACCACCCATATCTCAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCGACCACTCATGGATaGAAGCACAGCCTTATCCAA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPTTHG*KHSLIQ
Trigger: TTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTGTTGGAACCTCCAGTaGATCCACTACTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGCWNLQ*IHYWEP
Trigger: TGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCACTGTCCCACCAAGTaGTTGGAACCTCCAGTTGAT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGHCPTK*LEPPVD
Trigger: ATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGTCCTTTGGGGGACCTaGGAGTGGTTTATATTCAGG +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVVLWGT*EWFIFR
Trigger: CCTGAATATAAACCACTCCAAGGTCCCCCAAAGGAC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCATCATCTTGGTCCTTaGGGGGACCTTGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHHLGP*GDLGVV
Trigger: AACCACTCCAAGGTCCCCCAAAGGACCAAGATGATG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCATCATCTTGGTCCTTaGGGGGACCTTGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREHHLGP*GDLGVV
Trigger: AACCACTCCAAGGTCCCCCAAAGGACCAAGATGATG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATCACCCTCATCATCTaGGTCCTTTGGGGGACCTTG +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTITLII*VLWGTL
Trigger: CAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATCACCCTCATCATCTaGGTCCTTTGGGGGACCTTG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLITLII*VLWGTL
Trigger: CAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGATCACCCTCATCATCTaGGTCCTTTGGGGGACCTTG +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMITLII*VLWGTL
Trigger: CAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGAT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCCTTGTCCATCGTTGTaGTTTCTCCCGCCGTGCAAT +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMPCPSL*FLPPCN
Trigger: ATTGCACGGCGGGAGAAACAACAACGATGGACAAGG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCTTGTCCATCGTTGTaGTTTCTCCCGCCGTGCAAT +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPCPSL*FLPPCN
Trigger: ATTGCACGGCGGGAGAAACAACAACGATGGACAAGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGGTCCTGCATGATGTaGCAGTCTGTTTGGCTCACC +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGSCMM*QSVWLT
Trigger: GGTGAGCCAAACAGACTGCAACATCATGCAGGACCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCGCATCTCATAGTCTaGTGGGGTTGGTCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESHLIV*WGWSAP
Trigger: AGGAGCCGACCAACCCCACAAGACTATGAGATGCGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATCAGGACACGATCCTaGGGCCACTCAGAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEIRTRS*GHSEAL
Trigger: AAGAGCCTCTGAGTGGCCCAAGGATCGTGTCCTGAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTGTCTAGCAAGTGGTaGCCTGGCCCCAAAATTCCT +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLSSKW*PGPKIP
Trigger: AGGAATTTTGGGGCCAGGCAACCACTTGCTAGACAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTGTCTAGCAAGTGGTaGCCTGGCCCCAAAATTCCT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLSSKW*PGPKIP
Trigger: AGGAATTTTGGGGCCAGGCAACCACTTGCTAGACAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTGTCTAGCAAGTGGTaGCCTGGCCCCAAAATTCCT +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLSSKW*PGPKIP
Trigger: AGGAATTTTGGGGCCAGGCAACCACTTGCTAGACAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTACCATCCACCTTATaGATGACAGGGATCCGGGTC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVPSTL*MTGIRV
Trigger: GACCCGGATCCCTGTCATCAATAAGGTGGATGGTAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGGTACCATCCACCTTATaGATGACAGGGATCCGGGTC +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREVPSTL*MTGIRV
Trigger: GACCCGGATCCCTGTCATCAATAAGGTGGATGGTAC...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCCACTACTGCTGTGTaGGAACGTGTTATGCAGAGA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGATTAV*ERVMQR
Trigger: TCTCTGCATAACACGTTCCAACACAGCAGTAGTGGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTCATACTGCCGGGGTaGGTGCCAGTAAGGTCCATA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELILPG*VPVRSI
Trigger: TATGGACCTTACTGGCACCAACCCCGGCAGTATGAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643469.1
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGAGGGACCAGTTCACTaGCTGATGAATTCCCCACAT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGEGPVH*LMNSPH
Trigger: ATGTGGGGAATTCATCAGCAAGTGAACTGGTCCCTC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGGATCTCCTGGCTCTaGGAGACTTGCAAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRISWL*ETCKSP
Trigger: AGGACTTTTGCAAGTCTCCAAGAGCCAGGAGATCCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTGCTGGTGATACCTaGGGCCTGAATTTGTGCCAC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCAGDT*GLNLCH
Trigger: GTGGCACAAATTCAGGCCCAAGGTATCACCAGCACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTGTGCTGGTGATACCTaGGGCCTGAATTTGTGCCAC +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMECAGDT*GLNLCH
Trigger: GTGGCACAAATTCAGGCCCAAGGTATCACCAGCACA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGTTCCCAGGGACCTaGGCGGCCAACACTGTATTA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWFPGT*AANTVL
Trigger: TAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS TCA 90 bp TCCTGTTACCATTTCCTGGCTCCTACGGCTAGAAGGCCACTTCCCTaGGAGTACAGCCTGGCAGACGAGGTCAATACGGTTTATCAGGAC +
Preference number: 5 (lower is better)
Translates to: SCYHFLAPTARRPLP*EYSLADEVNTVYQD
Trigger: GTCCTGATAAACCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCTAGCCGTAGGAGCCAGGAAATGGTAACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS TCA 90 bp CCAGGCGCAGTGGTGCACAATGGTAGTCCCAGATACTCAGGAGGCTaGGGCAGAAGAATAGCTCAAGCCCAGAAGTTCATAGTGTGCTAC +
Preference number: 5 (lower is better)
Translates to: PGAVVHNGSPRYSGG*GRRIAQAQKFIVCY
Trigger: GTAGCACACTATGAACTTCTGGGCTTGAGCTATTCTTCTGCCTCAGCCTCCTGAGTATCTGGGACTACCATTGTGCACCACTGCGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS GCA 90 bp GATGACACAGACTGTAGGCCACTACTGCTGTGTTGGAACGTGTTATaGAGAGATAGAGACCCAGTGCTTCCACCCTGCATGAGGGCCATC +
Preference number: 5 (lower is better)
Translates to: DDTDCRPLLLCWNVL*RDRDPVLPPCMRAI
Trigger: GATGGCCCTCATGCAGGGTGGAAGCACTGGGTCTCTATCTCTGCATAACACGTTCCAACACAGCAGTAGTGGCCTACAGTCTGTGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp TCTTCTTCCTGCGTTTCTTCTCGCCTTCCTCCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTAAGACTCGAGGTATGTTCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: SSSCVSSRLPPLAER*ATRPHLRLEVCSAH
Trigger: GTGAGCAGAACATACCTCGAGTCTTAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAGAAGAAACGCAGGAAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp GTGGCAGAGACACCCATGAAAGGATTCCCTTGGCTCAGGATCTCCTaGCTCTTGGAGACTTGCAAAAGTCCTGATGTTGGCGTCGATGTC +
Preference number: 5 (lower is better)
Translates to: VAETPMKGFPWLRIS*LLETCKSPDVGVDV
Trigger: GACATCGACGCCAACATCAGGACTTTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCATGGGTGTCTCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp CTGGAGGAGACAGCTGTGGCAGAGACACCCATGAAAGGATTCCCTTaGCTCAGGATCTCCTGGCTCTTGGAGACTTGCAAAAGTCCTGAT +
Preference number: 5 (lower is better)
Translates to: LEETAVAETPMKGFP*LRISWLLETCKSPD
Trigger: ATCAGGACTTTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCATGGGTGTCTCTGCCACAGCTGTCTCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAACATGCCGATGTCCTaGGGGACCTCCAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTNMPMS*GTSRLW
Trigger: CCACAGTCTGGAGGTCCCCAAGGACATCGGCATGTT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTGGGCATTCTTGGCTaGAGTCAGGGCTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLGILG*SQGCQL
Trigger: CAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCTTGGCAGGCTGCCCTaGGGCATTCTTGGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLGRLP*GILGLS
Trigger: ACTCAAGCCAAGAATGCCCAAGGGCAGCCTGCCAAG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTACAATCTGGATTTTTaGCTGTGGCTGCTGCACCTG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGYNLDF*LWLLHL
Trigger: CAGGTGCAGCAGCCACAGCAAAAAATCCAGATTGTA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTCTTTGTCCTGGGCTTaGTCCTGGTCCCATTATCTG +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESLSWA*SWSHYL
Trigger: CAGATAATGGGACCAGGACAAAGCCCAGGACAAAGA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCTTTGTCCTGGGCTTaGTCCTGGTCCCATTATCTG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSLSWA*SWSHYL
Trigger: CAGATAATGGGACCAGGACAAAGCCCAGGACAAAGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGGCTGCAGTACCACCTaGACTGGTACTGAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTGCSTT*TGTESL
Trigger: AAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGCC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGCTGCAGTACCACCTaGACTGGTACTGAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLGCSTT*TGTESL
Trigger: AAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGCC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAATGAGGAGCAGAGCTaGCTGGTGATGACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMNEEQS*LVMTKL
Trigger: CAGCTTTGTCATCACCAGCAAGCTCTGCTCCTCATT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAATGAGGAGCAGAGCTaGCTGGTGATGACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMENEEQS*LVMTKL
Trigger: CAGCTTTGTCATCACCAGCAAGCTCTGCTCCTCATT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAATGAGGAGCAGAGCTaGCTGGTGATGACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTNEEQS*LVMTKL
Trigger: CAGCTTTGTCATCACCAGCAAGCTCTGCTCCTCATT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGACAGGAGTGATGGTGTaGAGCTTGCTCTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLTGVMV*SLLLPF
Trigger: AAAGGGCAAGAGCAAGCTCAACACCATCACTCCTGT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGACAGGAGTGATGGTGTaGAGCTTGCTCTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMETGVMV*SLLLPF
Trigger: AAAGGGCAAGAGCAAGCTCAACACCATCACTCCTGT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGACGATTCACCCTTTaGAGTTCTGGGTGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGRFTL*SSGCLD
Trigger: GTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATCAGAGCGTCAAACTaGTATGCGCCTGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEIRASN*YAPGMR
Trigger: CCTCATCCCAGGCGCATACAAGTTTGACGCTCTGAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTCCAGGTCCATGTGCTaGAGACTATCAAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESRSMC*RLSSSL
Trigger: CAAGCTGCTTGATAGTCTCAAGCACATGGACCTGGA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTCCAGGTCCATGTGCTaGAGACTATCAAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESRSMC*RLSSSL
Trigger: CAAGCTGCTTGATAGTCTCAAGCACATGGACCTGGA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTCCAGGTCCATGTGCTaGAGACTATCAAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMSRSMC*RLSSSL
Trigger: CAAGCTGCTTGATAGTCTCAAGCACATGGACCTGGA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATGAGATATGGGTGGTaGCAGCACTTGCGCAACTCC +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEMRYGW*QHLRNS
Trigger: GGAGTTGCGCAAGTGCTGCAACCACCCATATCTCAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCGACCACTCATGGATaGAAGCACAGCCTTATCCAA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPTTHG*KHSLIQ
Trigger: TTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCCGACCACTCATGGATaGAAGCACAGCCTTATCCAA +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTPTTHG*KHSLIQ
Trigger: TTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCGG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGGATTCCAGTAATGTaGCCATCCCGACCACTCATG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLWIPVM*PSRPLM
Trigger: CATGAGTGGTCGGGATGGCAACATTACTGGAATCCA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGGATTCCAGTAATGTaGCCATCCCGACCACTCATG +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMWIPVM*PSRPLM
Trigger: CATGAGTGGTCGGGATGGCAACATTACTGGAATCCA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGTGGATTCCAGTAATGTaGCCATCCCGACCACTCATG +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREWIPVM*PSRPLM
Trigger: CATGAGTGGTCGGGATGGCAACATTACTGGAATCCA...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGCTAAAGTGGCGCGTTaGTTTTCGTACTCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGAKVAR*FSYSRC
Trigger: ACACCTAGAGTACGAAAACAAACGCGCCACTTTAGC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTGTTGGAACCTCCAGTaGATCCACTACTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMCWNLQ*IHYWEP
Trigger: TGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTTGGAACCTCCAGTaGATCCACTACTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCWNLQ*IHYWEP
Trigger: TGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTGTCCCACCAAGTTGTaGGAACCTCCAGTTGATCCA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLCPTKL*EPPVDP
Trigger: TGGATCAACTGGAGGTTCCAACAACTTGGTGGGACA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTGTCCCACCAAGTTGTaGGAACCTCCAGTTGATCCA +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMECPTKL*EPPVDP
Trigger: TGGATCAACTGGAGGTTCCAACAACTTGGTGGGACA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCACTGTCCCACCAAGTaGTTGGAACCTCCAGTTGAT +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMHCPTK*LEPPVD
Trigger: ATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCACTGTCCCACCAAGTaGTTGGAACCTCCAGTTGAT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLHCPTK*LEPPVD
Trigger: ATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCACTGTCCCACCAAGTaGTTGGAACCTCCAGTTGAT +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEHCPTK*LEPPVD
Trigger: ATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTCCTTTGGGGGACCTaGGAGTGGTTTATATTCAGG +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVLWGT*EWFIFR
Trigger: CCTGAATATAAACCACTCCAAGGTCCCCCAAAGGAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACATCATCTTGGTCCTTaGGGGGACCTTGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEHHLGP*GDLGVV
Trigger: AACCACTCCAAGGTCCCCCAAAGGACCAAGATGATG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCAATTTCTTTCAGCTaGAAGGCTGCTTCACAACGC +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVAISFS*KAASQR
Trigger: GCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCTTGTCCATCGTTGTaGTTTCTCCCGCCGTGCAAT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPCPSL*FLPPCN
Trigger: ATTGCACGGCGGGAGAAACAACAACGATGGACAAGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTTCATCATAGAGCTTaGAGCGGGACTGGTCAGTTA +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLHHRA*SGTGQL
Trigger: TAACTGACCAGTCCCGCTCAAAGCTCTATGATGAAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTCATCATAGAGCTTaGAGCGGGACTGGTCAGTTA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLHHRA*SGTGQL
Trigger: TAACTGACCAGTCCCGCTCAAAGCTCTATGATGAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATTTGGGAATCCATCTaGGGACATAGTGAGGGACAG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGIWESI*GHSEGQ
Trigger: CTGTCCCTCACTATGTCCCAAGATGGATTCCCAAAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTGTCTAGCAAGTGGTaGCCTGGCCCCAAAATTCCT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELSSKW*PGPKIP
Trigger: AGGAATTTTGGGGCCAGGCAACCACTTGCTAGACAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTACCATCCACCTTATaGATGACAGGGATCCGGGTC +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVPSTL*MTGIRV
Trigger: GACCCGGATCCCTGTCATCAATAAGGTGGATGGTAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCCACTACTGCTGTGTaGGAACGTGTTATGCAGAGA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLATTAV*ERVMQR
Trigger: TCTCTGCATAACACGTTCCAACACAGCAGTAGTGGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGCCACTACTGCTGTGTaGGAACGTGTTATGCAGAGA +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMATTAV*ERVMQR
Trigger: TCTCTGCATAACACGTTCCAACACAGCAGTAGTGGC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGGAGTCCAGAGAGCTaGGCAGTCCAAGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRSPES*AVQGLP
Trigger: AGGAAGCCCTTGGACTGCCAAGCTCTCTGGACTCCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGAGGGACCAGTTCACTaGCTGATGAATTCCCCACAT +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTEGPVH*LMNSPH
Trigger: ATGTGGGGAATTCATCAGCAAGTGAACTGGTCCCTC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGGAGCTGTGGATTCTTaGGAAAGTTCTGTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMGAVDS*ESSVGA
Trigger: AGCTCCCACAGAACTTTCCAAAGAATCCACAGCTCC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGCAAAAGTCCTGATGTaGGCGTCGATGTCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVAKVLM*ASMSVR
Trigger: TCTTACAGACATCGACGCCAACATCAGGACTTTTGC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGGATCTCCTGGCTCTaGGAGACTTGCAAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRISWL*ETCKSP
Trigger: AGGACTTTTGCAAGTCTCCAAGAGCCAGGAGATCCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS TCA 90 bp ACCTTATTGATGACAGGGATCCGGGTCTCCAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCACTCCACCTCCAGCTCTACTAGCTTC +
Preference number: 5 (lower is better)
Translates to: TLLMTGIRVSRSTSR*LGSSMHSTSSSTSF
Trigger: GAAGCTAGTAGAGCTGGAGGTGGAGTGCATGGAAGAGCCTAATCACCTTGATGTGGACCTGGAGACCCGGATCCCTGTCATCAATAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp TGTTGGAACGTGTTATGCAGAGATAGAGACCCAGTGCTTCCACCCTaGATGAGGGCCATCATCTTAGAAAGGTCTGGTCGCATCCTACGG +
Preference number: 5 (lower is better)
Translates to: CWNVLCRDRDPVLPP*MRAIILERSGRILR
Trigger: CCGTAGGATGCGACCAGACCTTTCTAAGATGATGGCCCTCATGCAGGGTGGAAGCACTGGGTCTCTATCTCTGCATAACACGTTCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp CAACCTGGGCCAATTCATCCCTCCTTAGGCAACCTGGTGGTCCCTTaGTCCTGGGAGGTCACCATATTGATGTCAAACTTAGTGCAGACA +
Preference number: 5 (lower is better)
Translates to: QPGPIHPSLGNLVVP*SWEVTILMSNLVQT
Trigger: TGTCTGCACTAAGTTTGACATCAATATGGTGACCTCCCAGGAGCAAGGGACCACCAGGTTGCCTAAGGAGGGATGAATTGGCCCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS CCA 90 bp GGGCCAATTCATCCCTCCTTAGGCAACCTGGTGGTCCCTTGCTCCTaGGAGGTCACCATATTGATGTCAAACTTAGTGCAGACACCTGAT +
Preference number: 5 (lower is better)
Translates to: GPIHPSLGNLVVPCS*EVTILMSNLVQTPD
Trigger: ATCAGGTGTCTGCACTAAGTTTGACATCAATATGGTGACCTCCCAGGAGCAAGGGACCACCAGGTTGCCTAAGGAGGGATGAATTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGGGCTGCCAGCTGGTaGCCCTGTAACACTATCTTG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRAASW*PCNTIL
Trigger: CAAGATAGTGTTACAGGGCAACCAGCTGGCAGCCCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGGATAGTTACTACCTaGGCAGGCTGCCCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTWIVTT*AGCPWA
Trigger: TGCCCAAGGGCAGCCTGCCAAGGTAGTAACTATCCA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTACAATCTGGATTTTTaGCTGTGGCTGCTGCACCTG +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMYNLDF*LWLLHL
Trigger: CAGGTGCAGCAGCCACAGCAAAAAATCCAGATTGTA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAATGAGGAGCAGAGCTaGCTGGTGATGACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNENEEQS*LVMTKL
Trigger: CAGCTTTGTCATCACCAGCAAGCTCTGCTCCTCATT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCCGATTTGCTTTCTCTaGCTTCTTCTGGTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVPICFL*LLLVFQ
Trigger: TTGGAACACCAGAAGAAGCAAGAGAAAGCAAATCGG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAACAGGAGTGATGGTGTaGAGCTTGCTCTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNETGVMV*SLLLPF
Trigger: AAAGGGCAAGAGCAAGCTCAACACCATCACTCCTGT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGCATAGAAAGCACTTaGTCTACAATGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRIEST*STMAAS
Trigger: AGATGCAGCCATTGTAGACAAAGTGCTTTCTATGCG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCATTTCTTCCAGGCACTaGCCTGCGGACGATTCACCC +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTISSRH*PADDSP
Trigger: GGGTGAATCGTCCGCAGGCAAGTGCCTGGAAGAAAT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCGTCCCCGTGAATCTTaGCAGTACATTTCATACTGT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRPRES*QYISYC
Trigger: ACAGTATGAAATGTACTGCAAAGATTCACGGGGACG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCCAGGTCCATGTGCTaGAGACTATCAAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESRSMC*RLSSSL
Trigger: CAAGCTGCTTGATAGTCTCAAGCACATGGACCTGGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCTGTGAGTAGCACCTaGTGTTCCAGGTCCATGTGC +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPVSST*CSRSMC
Trigger: GCACATGGACCTGGAACACAAGGTGCTACTCACAGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGGTGGTTGCAGCACTaGCGCAACTCCATCATTGTG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGWLQH*RNSIIV
Trigger: CACAATGATGGAGTTGCGCAAGTGCTGCAACCACCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTCAATAAGAACCAGTTaGCCGGCTGAACGAACCATG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSIRTS*PAERTM
Trigger: CATGGTTCGTTCAGCCGGCAAACTGGTTCTTATTGA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCAATAAGAACCAGTTaGCCGGCTGAACGAACCATG +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSIRTS*PAERTM
Trigger: CATGGTTCGTTCAGCCGGCAAACTGGTTCTTATTGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGGATTCCAGTAATGTaGCCATCCCGACCACTCATG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEWIPVM*PSRPLM
Trigger: CATGAGTGGTCGGGATGGCAACATTACTGGAATCCA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCTAAAGTGGCGCGTTaGTTTTCGTACTCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLAKVAR*FSYSRC
Trigger: ACACCTAGAGTACGAAAACAAACGCGCCACTTTAGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGCTAAAGTGGCGCGTTaGTTTTCGTACTCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTAKVAR*FSYSRC
Trigger: ACACCTAGAGTACGAAAACAAACGCGCCACTTTAGC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGTTGGAACCTCCAGTaGATCCACTACTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECWNLQ*IHYWEP
Trigger: TGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATGTCCCACCAAGTTGTaGGAACCTCCAGTTGATCCA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNECPTKL*EPPVDP
Trigger: TGGATCAACTGGAGGTTCCAACAACTTGGTGGGACA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACACTGTCCCACCAAGTaGTTGGAACCTCCAGTTGAT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEHCPTK*LEPPVD
Trigger: ATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTCCTTTGGGGGACCTaGGAGTGGTTTATATTCAGG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVLWGT*EWFIFR
Trigger: CCTGAATATAAACCACTCCAAGGTCCCCCAAAGGAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGCAATTTCTTTCAGCTaGAAGGCTGCTTCACAACGC +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMAISFS*KAASQR
Trigger: GCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGC...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCAATTTCTTTCAGCTaGAAGGCTGCTTCACAACGC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLAISFS*KAASQR
Trigger: GCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAAGCCATGGAAGTACTaGGTAAGGCTTTCATCTGTC +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGKPWKY*VRLSSV
Trigger: GACAGATGAAAGCCTTACCAAGTACTTCCATGGCTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGCTGGTGCTCCTGCTaGATGGTTCTGCATATAATT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSWCSC*MVLHII
Trigger: AATTATATGCAGAACCATCAAGCAGGAGCACCAGCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTCATCATAGAGCTTaGAGCGGGACTGGTCAGTTA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLHHRA*SGTGQL
Trigger: TAACTGACCAGTCCCGCTCAAAGCTCTATGATGAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTTCATCATAGAGCTTaGAGCGGGACTGGTCAGTTA +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLHHRA*SGTGQL
Trigger: TAACTGACCAGTCCCGCTCAAAGCTCTATGATGAAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATTTGGGAATCCATCTaGGGACATAGTGAGGGACAG +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEIWESI*GHSEGQ
Trigger: CTGTCCCTCACTATGTCCCAAGATGGATTCCCAAAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGGTTCTCCATCTTCATTaGGGAATCCATCTTGGGACA +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVVLHLH*GIHLGT
Trigger: TGTCCCAAGATGGATTCCCAAATGAAGATGGAGAAC...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTTCTCCATCTTCATTaGGGAATCCATCTTGGGACA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVLHLH*GIHLGT
Trigger: TGTCCCAAGATGGATTCCCAAATGAAGATGGAGAAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAAGCTCAGGGGTCATTaGTTCTCCATCTTCATTTGG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGKLRGH*FSIFIW
Trigger: CCAAATGAAGATGGAGAACAAATGACCCCTGAGCTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCATTCGCCATCAACTaGTGCTTCTGGAATGTTAAC +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPFAIN*CFWNVN
Trigger: GTTAACATTCCAGAAGCACAAGTTGATGGCGAATGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGAGGGACCAGTTCACTaGCTGATGAATTCCCCACAT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEEGPVH*LMNSPH
Trigger: ATGTGGGGAATTCATCAGCAAGTGAACTGGTCCCTC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGGAGCTGTGGATTCTTaGGAAAGTTCTGTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEGAVDS*ESSVGA
Trigger: AGCTCCCACAGAACTTTCCAAAGAATCCACAGCTCC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGCAAAAGTCCTGATGTaGGCGTCGATGTCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLAKVLM*ASMSVR
Trigger: TCTTACAGACATCGACGCCAACATCAGGACTTTTGC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGGATCTCCTGGCTCTaGGAGACTTGCAAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERISWL*ETCKSP
Trigger: AGGACTTTTGCAAGTCTCCAAGAGCCAGGAGATCCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCCAGGCCAAATAAATTaGGGTCATCGAACAGATCCA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGPGQIN*GHRTDP
Trigger: TGGATCTGTTCGATGACCCAAATTTATTTGGCCTGG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCCTCAATGGGGTCTaGTGTGACCTGGTTAAAGCT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFLNGV*CDLVKA
Trigger: AGCTTTAACCAGGTCACACAAGACCCCATTGAGGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGTGCCGGTTAGCACTTaGGTAAAAGTGACTTTTCCA +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGVPVST*VKVTFP
Trigger: TGGAAAAGTCACTTTTACCAAAGTGCTAACCGGCAC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGGTTCCCAGGGACCTaGGCGGCCAACACTGTATTA +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTWFPGT*AANTVL
Trigger: TAATACAGTGTTGGCCGCCAAGGTCCCTGGGAACCA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS TCA 90 bp GTGGTGGTGGTGATGAAGCATGGTGCTGGAGTCTACATGAGGGGATaGTGGTGCACCACCCATCACAAATGGCATAAAAGGCAAAGATGC +
Preference number: 5 (lower is better)
Translates to: VVVVMKHGAGVYMRG*WCTTHHKWHKRQRC
Trigger: GCATCTTTGCCTTTTATGCCATTTGTGATGGGTGGTGCACCATCATCCCCTCATGTAGACTCCAGCACCATGCTTCATCACCACCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp TGGCACTGCTGTGACCCAAAGATGACACAGACTGTAGGCCACTACTaGTGTGTTGGAACGTGTTATGCAGAGATAGAGACCCAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: WHCCDPKMTQTVGHY*CVGTCYAEIETQCF
Trigger: GAAGCACTGGGTCTCTATCTCTGCATAACACGTTCCAACACAGCAGTAGTGGCCTACAGTCTGTGTCATCTTTGGGTCACAGCAGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 90 bp GAAATTAACAGAGTTGCTTCTGTTGGCATCCATCCTCACCCACTCTaGAATCTTGCTTACCATCTCCAGCTGCTGGGGGAAGGCGGCATA +
Preference number: 5 (lower is better)
Translates to: EINRVASVGIHPHPL*NLAYHLQLLGEGGI
Trigger: TATGCCGCCTTCCCCCAGCAGCTGGAGATGGTAAGCAAGATTGCAGAGTGGGTGAGGATGGATGCCAACAGAAGCAACTCTGTTAATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS CCA 90 bp GAGTCACCATATTCTCCAGGAGTCAATGAGGGACTGTCTAGCAAGTaGTTGCCTGGCCCCAAAATTCCTCCTGTTACCATTTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ESPYSPGVNEGLSSK*LPGPKIPPVTISWL
Trigger: GAGCCAGGAAATGGTAACAGGAGGAATTTTGGGGCCAGGCAACCACTTGCTAGACAGTCCCTCATTGACTCCTGGAGAATATGGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 90 bp GCTGCTCCTGGCTGGCAGGCTGAGTGGTATAATCATGCAAGGTTATaGATTCTGGAGCTGGAGCTGTGGATTCTTTGGAAAGTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: AAPGWQAEWYNHARL*ILELELWILWKVLW
Trigger: CCACAGAACTTTCCAAAGAATCCACAGCTCCAGCTCCAGAATCCATAACCTTGCATGATTATACCACTCAGCCTGCCAGCCAGGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCCTGTAACACTATCTaGCCTGGTAGACTCCCTAGC +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPCNTI*PGRLPS
Trigger: GCTAGGGAGTCTACCAGGCAAGATAGTGTTACAGGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATACAATCTGGATTTTTaGCTGTGGCTGCTGCACCTG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEYNLDF*LWLLHL
Trigger: CAGGTGCAGCAGCCACAGCAAAAAATCCAGATTGTA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCCGATTTGCTTTCTCTaGCTTCTTCTGGTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTPICFL*LLLVFQ
Trigger: TTGGAACACCAGAAGAAGCAAGAGAAAGCAAATCGG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCGATTTGCTTTCTCTaGCTTCTTCTGGTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPICFL*LLLVFQ
Trigger: TTGGAACACCAGAAGAAGCAAGAGAAAGCAAATCGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATGTTTTACTCTTCTTaGGCTTCTCCTCTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGMFYSS*ASPLSA
Trigger: GGCTGAAAGAGGAGAAGCCAAAGAAGAGTAAAACAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGATGTTTTACTCTTCTTaGGCTTCTCCTCTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVMFYSS*ASPLSA
Trigger: GGCTGAAAGAGGAGAAGCCAAAGAAGAGTAAAACAT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCGCATAGAAAGCACTTaGTCTACAATGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERIEST*STMAAS
Trigger: AGATGCAGCCATTGTAGACAAAGTGCTTTCTATGCG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCGCATAGAAAGCACTTaGTCTACAATGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRIEST*STMAAS
Trigger: AGATGCAGCCATTGTAGACAAAGTGCTTTCTATGCG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGACGATTCACCCTTTaGAGTTCTGGGTGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGRFTL*SSGCLD
Trigger: GTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCGTCCCCGTGAATCTTaGCAGTACATTTCATACTGT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRPRES*QYISYC
Trigger: ACAGTATGAAATGTACTGCAAAGATTCACGGGGACG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCGTCCCCGTGAATCTTaGCAGTACATTTCATACTGT +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMERPRES*QYISYC
Trigger: ACAGTATGAAATGTACTGCAAAGATTCACGGGGACG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCATCAGAGCGTCAAACTaGTATGCGCCTGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTIRASN*YAPGMR
Trigger: CCTCATCCCAGGCGCATACAAGTTTGACGCTCTGAT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAGATCCCCAAAGTCCTaGAGAAACTCTGATTCTGAG +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTRERSPKS*RNSDSE
Trigger: CTCAGAATCAGAGTTTCTCAAGGACTTTGGGGATCT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGATCCCCAAAGTCCTaGAGAAACTCTGATTCTGAG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLRSPKS*RNSDSE
Trigger: CTCAGAATCAGAGTTTCTCAAGGACTTTGGGGATCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCATGAGATATGGGTGGTaGCAGCACTTGCGCAACTCC +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTMRYGW*QHLRNS
Trigger: GGAGTTGCGCAAGTGCTGCAACCACCCATATCTCAT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTTTCTTCAGCACCATaGATGAGATATGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFSSAP*MRYGWL
Trigger: CAACCACCCATATCTCATCAATGGTGCTGAAGAAAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCAATAAGAACCAGTTaGCCGGCTGAACGAACCATG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESIRTS*PAERTM
Trigger: CATGGTTCGTTCAGCCGGCAAACTGGTTCTTATTGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGCTTCTTAGAGAACTGTaGGATTCCAGTAATGTTGCC +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLLREL*DSSNVA
Trigger: GGCAACATTACTGGAATCCAACAGTTCTCTAAGAAG...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCTAAAGTGGCGCGTTaGTTTTCGTACTCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEAKVAR*FSYSRC
Trigger: ACACCTAGAGTACGAAAACAAACGCGCCACTTTAGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAGCCTCTATCTTCATTaGTTCTCTCTTGTAGCTGCG +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESLYLH*FSLVAA
Trigger: CGCAGCTACAAGAGAGAACAAATGAAGATAGAGGCT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAGCCTCTATCTTCATTaGTTCTCTCTTGTAGCTGCG +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMESLYLH*FSLVAA
Trigger: CGCAGCTACAAGAGAGAACAAATGAAGATAGAGGCT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCAATTTCTTTCAGCTaGAAGGCTGCTTCACAACGC +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEAISFS*KAASQR
Trigger: GCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCAGTTTGTTCACGCCTaGTCCATCGTTGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEQFVHA*SIVVVS
Trigger: AGAAACAACAACGATGGACAAGGCGTGAACAAACTG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCAGTTTGTTCACGCCTaGTCCATCGTTGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLQFVHA*SIVVVS
Trigger: AGAAACAACAACGATGGACAAGGCGTGAACAAACTG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCAGTTTGTTCACGCCTaGTCCATCGTTGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTQFVHA*SIVVVS
Trigger: AGAAACAACAACGATGGACAAGGCGTGAACAAACTG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTCGATAAAAATCAGTTaGTTCACGCCTTGTCCATCG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGSIKIS*FTPCPS
Trigger: CGATGGACAAGGCGTGAACAAACTGATTTTTATCGA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAAGCCATGGAAGTACTaGGTAAGGCTTTCATCTGTC +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMKPWKY*VRLSSV
Trigger: GACAGATGAAAGCCTTACCAAGTACTTCCATGGCTT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAAGCCATGGAAGTACTaGGTAAGGCTTTCATCTGTC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLKPWKY*VRLSSV
Trigger: GACAGATGAAAGCCTTACCAAGTACTTCCATGGCTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGAAGCCATGGAAGTACTaGGTAAGGCTTTCATCTGTC +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEKPWKY*VRLSSV
Trigger: GACAGATGAAAGCCTTACCAAGTACTTCCATGGCTT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAGCTGGTGCTCCTGCTaGATGGTTCTGCATATAATT +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLSWCSC*MVLHII
Trigger: AATTATATGCAGAACCATCAAGCAGGAGCACCAGCT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGAGCTGGTGCTCCTGCTaGATGGTTCTGCATATAATT +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTRESWCSC*MVLHII
Trigger: AATTATATGCAGAACCATCAAGCAGGAGCACCAGCT...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTTCATCATAGAGCTTaGAGCGGGACTGGTCAGTTA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELHHRA*SGTGQL
Trigger: TAACTGACCAGTCCCGCTCAAAGCTCTATGATGAAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATTTGGGAATCCATCTaGGGACATAGTGAGGGACAG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEIWESI*GHSEGQ
Trigger: CTGTCCCTCACTATGTCCCAAGATGGATTCCCAAAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGTTCTCCATCTTCATTaGGGAATCCATCTTGGGACA +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLVLHLH*GIHLGT
Trigger: TGTCCCAAGATGGATTCCCAAATGAAGATGGAGAAC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAAGCTCAGGGGTCATTaGTTCTCCATCTTCATTTGG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLKLRGH*FSIFIW
Trigger: CCAAATGAAGATGGAGAACAAATGACCCCTGAGCTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAAGCTCAGGGGTCATTaGTTCTCCATCTTCATTTGG +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTKLRGH*FSIFIW
Trigger: CCAAATGAAGATGGAGAACAAATGACCCCTGAGCTT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCCATTCGCCATCAACTaGTGCTTCTGGAATGTTAAC +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEPFAIN*CFWNVN
Trigger: GTTAACATTCCAGAAGCACAAGTTGATGGCGAATGG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCCATTCGCCATCAACTaGTGCTTCTGGAATGTTAAC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLPFAIN*CFWNVN
Trigger: GTTAACATTCCAGAAGCACAAGTTGATGGCGAATGG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCATTCGCCATCAACTaGTGCTTCTGGAATGTTAAC +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPFAIN*CFWNVN
Trigger: GTTAACATTCCAGAAGCACAAGTTGATGGCGAATGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGCAAAAGTCCTGATGTaGGCGTCGATGTCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEAKVLM*ASMSVR
Trigger: TCTTACAGACATCGACGCCAACATCAGGACTTTTGC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCATGAAAGGATTCCCTaGGCTCAGGATCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTHERIP*AQDLLA
Trigger: AGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCATG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCCAGGCCAAATAAATTaGGGTCATCGAACAGATCCA +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTREPGQIN*GHRTDP
Trigger: TGGATCTGTTCGATGACCCAAATTTATTTGGCCTGG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTCCTCAATGGGGTCTaGTGTGACCTGGTTAAAGCT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFLNGV*CDLVKA
Trigger: AGCTTTAACCAGGTCACACAAGACCCCATTGAGGAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTGTGCTGGTGATACCTaGGGCCTGAATTTGTGCCAC +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTCAGDT*GLNLCH
Trigger: GTGGCACAAATTCAGGCCCAAGGTATCACCAGCACA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTGTGCCGGTTAGCACTTaGGTAAAAGTGACTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTVPVST*VKVTFP
Trigger: TGGAAAAGTCACTTTTACCAAAGTGCTAACCGGCAC...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646647.2
CDS TCA 90 bp TGGCCCGACAAATGGTCTCCACATCTCGTTCAGTCATACGTCGCTTaGAGCGTCCATGAGATAAAATATCTCGCCATCGTCCCCAACCAT +
Preference number: 5 (lower is better)
Translates to: WPDKWSPHLVQSYVA*SVHEIKYLAIVPNH
Trigger: ATGGTTGGGGACGATGGCGAGATATTTTATCTCATGGACGCTTCAAGCGACGTATGACTGAACGAGATGTGGAGACCATTTGTCGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 90 bp GGCTTTCCCAGAGAAAGCTCTCATGTGCTCACTCTCTCAAAGAGTTaGTGGGCCCTCTATGAAACCAAAATTCACCTCCCCCTTTCACTC +
Preference number: 5 (lower is better)
Translates to: GFPRESSHVLTLSKS*WALYETKIHLPLSL
Trigger: GAGTGAAAGGGGGAGGTGAATTTTGGTTTCATAGAGGGCCCAGCAACTCTTTGAGAGAGTGAGCACATGAGAGCTTTCTCTGGGAAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS CCA 90 bp ATGGTTCTGCATATAATTCATACGGGCAGCCAGAAAAGAGAAGTCTaGGTCCTGCATGATGTTGCAGTCTGTTTGGCTCACCCCATGGCG +
Preference number: 5 (lower is better)
Translates to: MVLHIIHTGSQKREV*VLHDVAVCLAHPMA
Trigger: CGCCATGGGGTGAGCCAAACAGACTGCAACATCATGCAGGACCCAGACTTCTCTTTTCTGGCTGCCCGTATGAATTATATGCAGAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp CTGGCTGGCAGGCTGAGTGGTATAATCATGCAAGGTTATGGATTCTaGAGCTGGAGCTGTGGATTCTTTGGAAAGTTCTGTGGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: LAGRLSGIIMQGYGF*SWSCGFFGKFCGSC
Trigger: ACAGCTCCCACAGAACTTTCCAAAGAATCCACAGCTCCAGCTCCAGAATCCATAACCTTGCATGATTATACCACTCAGCCTGCCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp AGAAACAAGTGCATGTCAGATTGTCCTGACCTTCATGGAGCAAGATaGCTACGTCTTCAGAGGAAGATGGTGGAACTCCTGCAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RNKCMSDCPDLHGAR*LRLQRKMVELLQWL
Trigger: CAGCCACTGCAGGAGTTCCACCATCTTCCTCTGAAGACGTAGCCATCTTGCTCCATGAAGGTCAGGACAATCTGACATGCACTTGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557364.6
ENST00000643048.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTCTTTGTCCTGGGCTTaGTCCTGGTCCCATTATCTG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSLSWA*SWSHYL
Trigger: CAGATAATGGGACCAGGACAAAGCCCAGGACAAAGA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGCTGCAGTACCACCTaGACTGGTACTGAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGCSTT*TGTESL
Trigger: AAGACTTTCAGTACCAGTCAAGGTGGTACTGCAGCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAATGAGGAGCAGAGCTaGCTGGTGATGACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTNEEQS*LVMTKL
Trigger: CAGCTTTGTCATCACCAGCAAGCTCTGCTCCTCATT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCGATTTGCTTTCTCTaGCTTCTTCTGGTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPICFL*LLLVFQ
Trigger: TTGGAACACCAGAAGAAGCAAGAGAAAGCAAATCGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATGTTTTACTCTTCTTaGGCTTCTCCTCTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLMFYSS*ASPLSA
Trigger: GGCTGAAAGAGGAGAAGCCAAAGAAGAGTAAAACAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTATGTTTTACTCTTCTTaGGCTTCTCCTCTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTMFYSS*ASPLSA
Trigger: GGCTGAAAGAGGAGAAGCCAAAGAAGAGTAAAACAT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCACAGGAGTGATGGTGTaGAGCTTGCTCTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTTGVMV*SLLLPF
Trigger: AAAGGGCAAGAGCAAGCTCAACACCATCACTCCTGT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGCATAGAAAGCACTTaGTCTACAATGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERIEST*STMAAS
Trigger: AGATGCAGCCATTGTAGACAAAGTGCTTTCTATGCG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACGTCCCCGTGAATCTTaGCAGTACATTTCATACTGT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERPRES*QYISYC
Trigger: ACAGTATGAAATGTACTGCAAAGATTCACGGGGACG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAGACTATCAAGCAGCTaGCAATTACGGTTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGRLSSS*QLRFFS
Trigger: ACTGAAAAACCGTAATTGCAAGCTGCTTGATAGTCT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGAGACTATCAAGCAGCTaGCAATTACGGTTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVRLSSS*QLRFFS
Trigger: ACTGAAAAACCGTAATTGCAAGCTGCTTGATAGTCT...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTCCAGGTCCATGTGCTaGAGACTATCAAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSRSMC*RLSSSL
Trigger: CAAGCTGCTTGATAGTCTCAAGCACATGGACCTGGA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGTTCTTCTACAGTATTTaGCAATGGTGTTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGFFYSI*QWCSCE
Trigger: CTCACAGGAACACCATTGCAAAATACTGTAGAAGAA...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGATCCCCAAAGTCCTaGAGAAACTCTGATTCTGAG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERSPKS*RNSDSE
Trigger: CTCAGAATCAGAGTTTCTCAAGGACTTTGGGGATCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTTTCTTCAGCACCATaGATGAGATATGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFSSAP*MRYGWL
Trigger: CAACCACCCATATCTCATCAATGGTGCTGAAGAAAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTTTTCTTCAGCACCATaGATGAGATATGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMFSSAP*MRYGWL
Trigger: CAACCACCCATATCTCATCAATGGTGCTGAAGAAAA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTCTTCTTAGAGAACTGTaGGATTCCAGTAATGTTGCC +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTLLREL*DSSNVA
Trigger: GGCAACATTACTGGAATCCAACAGTTCTCTAAGAAG...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTCTTAGAGAACTGTaGGATTCCAGTAATGTTGCC +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLLREL*DSSNVA
Trigger: GGCAACATTACTGGAATCCAACAGTTCTCTAAGAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGCTTCTTAGAGAACTGTaGGATTCCAGTAATGTTGCC +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELLREL*DSSNVA
Trigger: GGCAACATTACTGGAATCCAACAGTTCTCTAAGAAG...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGAAATTATTCTTGCTGTaGAGCAGATCCATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGKLFLL*SRSMSR
Trigger: CCTAGACATGGATCTGCTCAACAGCAAGAATAATTT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGGATTCTGCAATTCTTTaGTCTTGCCATTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGDSAIL*SCHFQL
Trigger: CAGCTGAAAATGGCAAGACAAAAGAATTGCAGAATC...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCAATTGCTTTGTCATCTGGTCGGCCAGCCTTTTCTAGGAAACATAAGGCTGGGCACTGTCCCACCAAGTaGTTGGAACCTCCAGTTGAT +
Preference number: 5 (lower is better)
Translates to: AIALSSGRPAFSRKHKAGHCPTK*LEPPVD
Trigger: ATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTG...CCCAGCCTTATGTTTCCTAGAAAAGGCTGGCCGACCAGATGACAAAGCAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGCCTCTATCTTCATTaGTTCTCTCTTGTAGCTGCG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESLYLH*FSLVAA
Trigger: CGCAGCTACAAGAGAGAACAAATGAAGATAGAGGCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACAGTTTGTTCACGCCTaGTCCATCGTTGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEQFVHA*SIVVVS
Trigger: AGAAACAACAACGATGGACAAGGCGTGAACAAACTG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTCGATAAAAATCAGTTaGTTCACGCCTTGTCCATCG +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTSIKIS*FTPCPS
Trigger: CGATGGACAAGGCGTGAACAAACTGATTTTTATCGA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTTCATCTGTCTTTTaGTCTAGTCGAGCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLSSVF*SSRAKV
Trigger: CACTTTTGCTCGACTAGACAAAAAGACAGATGAAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGCTGGTGCTCCTGCTaGATGGTTCTGCATATAATT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESWCSC*MVLHII
Trigger: AATTATATGCAGAACCATCAAGCAGGAGCACCAGCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTTCTCCATCTTCATTaGGGAATCCATCTTGGGACA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVLHLH*GIHLGT
Trigger: TGTCCCAAGATGGATTCCCAAATGAAGATGGAGAAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCATTCGCCATCAACTaGTGCTTCTGGAATGTTAAC +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPFAIN*CFWNVN
Trigger: GTTAACATTCCAGAAGCACAAGTTGATGGCGAATGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGAGGGACCAGTTCACTaGCTGATGAATTCCCCACAT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTEGPVH*LMNSPH
Trigger: ATGTGGGGAATTCATCAGCAAGTGAACTGGTCCCTC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGGAGCTGTGGATTCTTaGGAAAGTTCTGTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTGAVDS*ESSVGA
Trigger: AGCTCCCACAGAACTTTCCAAAGAATCCACAGCTCC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGGATCTCCTGGCTCTaGGAGACTTGCAAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRISWL*ETCKSP
Trigger: AGGACTTTTGCAAGTCTCCAAGAGCCAGGAGATCCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACCAGGCCAAATAAATTaGGGTCATCGAACAGATCCA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEPGQIN*GHRTDP
Trigger: TGGATCTGTTCGATGACCCAAATTTATTTGGCCTGG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGTGCCGGTTAGCACTTaGGTAAAAGTGACTTTTCCA +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEVPVST*VKVTFP
Trigger: TGGAAAAGTCACTTTTACCAAAGTGCTAACCGGCAC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000557364.6
ENST00000643469.1
ENST00000646647.2
CDS TCA 90 bp GGCACTTGCCTGCGGACGATTCACCCTTTTGAGTTCTGGGTGCCTTaGCTGAATCCGTTTAAATTCTCGAATCTTGCCCTCATCAACATC +
Preference number: 5 (lower is better)
Translates to: GTCLRTIHPFEFWVP*LNPFKFSNLALINI
Trigger: GATGTTGATGAGGGCAAGATTCGAGAATTTAAACGGATTCAGTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTCCGCAGGCAAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000554384.1
ENST00000557364.6
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS TCA 90 bp AAGCTCTCATGTGCTCACTCTCTCAAAGAGTTGCTGGGCCCTCTATaGAACCAAAATTCACCTCCCCCTTTCACTCAAGTCACCTGGGTA +
Preference number: 5 (lower is better)
Translates to: KLSCAHSLKELLGPL*NQNSPPPFTQVTWV
Trigger: TACCCAGGTGACTTGAGTGAAAGGGGGAGGTGAATTTTGGTTTCATAGAGGGCCCAGCAACTCTTTGAGAGAGTGAGCACATGAGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS GCA 90 bp TCCACAAAGAACTGCATGGAAGGCAAAGTCTCGCCATCTGGTTCTTaGACTGGTTCAGGGAGGATAGGCTCAGGTTTTATTGGACCAGTT +
Preference number: 5 (lower is better)
Translates to: STKNCMEGKVSPSGS*TGSGRIGSGFIGPV
Trigger: AACTGGTCCAATAAAACCTGAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTGCCTTCCATGCAGTTCTTTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000642914.1
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp GTGCCAGTAAGGTCCATACAGCAGAGGCGGAAGATTTCTGGTAACTaGAGACCCCAAAATGGAAATGAGGTACATGCACTTGAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: VPVRSIQQRRKISGN*RPQNGNEVHALEVR
Trigger: CCTTACCTCAAGTGCATGTACCTCATTTCCATTTTGGGGTCTCCAGTTACCAGAAATCTTCCGCCTCTGCTGTATGGACCTTACTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553283.1
CDS CCA 90 bp GGCAGGCTGAGTGGTATAATCATGCAAGGTTATGGATTCTGGAGCTaGAGCTGTGGATTCTTTGGAAAGTTCTGTGGGAGCTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: GRLSGIIMQGYGFWS*SCGFFGKFCGSCFL
Trigger: GAGGAAACAGCTCCCACAGAACTTTCCAAAGAATCCACAGCTCCAGCTCCAGAATCCATAACCTTGCATGATTATACCACTCAGCCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp GAGCTTGGCAGTCCAAGGGCTTCCTCAATGGGGTCTTGTGTGACCTaGTTAAAGCTGTCATCAGTCAGAGAGTCCAGGCCAAATAAATTT +
Preference number: 5 (lower is better)
Translates to: ELGSPRASSMGSCVT*LKLSSVRESRPNKF
Trigger: AAATTTATTTGGCCTGGACTCTCTGACTGATGACAGCTTTAACCAGGTCACACAAGACCCCATTGAGGAAGCCCTTGGACTGCCAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTACAATCTGGATTTTTaGCTGTGGCTGCTGCACCTG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTYNLDF*LWLLHL
Trigger: CAGGTGCAGCAGCCACAGCAAAAAATCCAGATTGTA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp AGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGTTAAATTCTCGAATCTaGCCCTCATCAACATCTTCT +
Preference number: 5 (lower is better)
Translates to: RLCQRLGPALHSLWLMEVLNSRI*PSSTSS
Trigger: AGAAGATGTTGATGAGGGCAAGATTCGAGAATTTAA...CACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGACTATCAAGCAGCTaGCAATTACGGTTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTRLSSS*QLRFFS
Trigger: ACTGAAAAACCGTAATTGCAAGCTGCTTGATAGTCT...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTCTTCTACAGTATTTaGCAATGGTGTTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEFFYSI*QWCSCE
Trigger: CTCACAGGAACACCATTGCAAAATACTGTAGAAGAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGTTCTTCTACAGTATTTaGCAATGGTGTTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLFFYSI*QWCSCE
Trigger: CTCACAGGAACACCATTGCAAAATACTGTAGAAGAA...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTTTCTTCTACAGTATTTaGCAATGGTGTTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LCQRLGPALHSLWLMEVTFFYSI*QWCSCE
Trigger: CTCACAGGAACACCATTGCAAAATACTGTAGAAGAA...AGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTTTCTTCAGCACCATaGATGAGATATGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEFSSAP*MRYGWL
Trigger: CAACCACCCATATCTCATCAATGGTGCTGAAGAAAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CTGCAATTGCTTTGTCATCTGGTCGGCCAGCCTTTTCTAGGAAACATAAGGCTGTGGATTCCAGTAATGTaGCCATCCCGACCACTCATG +
Preference number: 5 (lower is better)
Translates to: LQLLCHLVGQPFLGNIRLWIPVM*PSRPLM
Trigger: CATGAGTGGTCGGGATGGCAACATTACTGGAATCCA...CAGCCTTATGTTTCCTAGAAAAGGCTGGCCGACCAGATGACAAAGCAATTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGAAATTATTCTTGCTGTaGAGCAGATCCATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLKLFLL*SRSMSR
Trigger: CCTAGACATGGATCTGCTCAACAGCAAGAATAATTT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGAAATTATTCTTGCTGTaGAGCAGATCCATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMKLFLL*SRSMSR
Trigger: CCTAGACATGGATCTGCTCAACAGCAAGAATAATTT...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGATTACCAAATTATTCTaGCTGTTGAGCAGATCCATG +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGITKLF*LLSRSM
Trigger: CATGGATCTGCTCAACAGCAAGAATAATTTGGTAAT...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGATTCTGCAATTCTTTaGTCTTGCCATTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEDSAIL*SCHFQL
Trigger: CAGCTGAAAATGGCAAGACAAAAGAATTGCAGAATC...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGATTCTGCAATTCTTTaGTCTTGCCATTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLDSAIL*SCHFQL
Trigger: CAGCTGAAAATGGCAAGACAAAAGAATTGCAGAATC...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGGGGCTTATAACTTTCATCTaGGAACAAAGTGTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: ARVNENTAAAQAMGPMLGLITFI*EQSVRV
Trigger: AACCCTGACACTTTGTTCCAAGATGAAAGTTATAAG...CCCCAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp GGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGTCCTTTGGGGGACCTaGGAGTGGTTTATATTCAGG +
Preference number: 5 (lower is better)
Translates to: GSPSSSWSFGGPWSGLYSVLWGT*EWFIFR
Trigger: CCTGAATATAAACCACTCCAAGGTCCCCCAAAGGAC...TGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CAA 90 bp ATCATCAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTAGCCTCTATCTTCATTaGTTCTCTCTTGTAGCTGCG +
Preference number: 5 (lower is better)
Translates to: IIKGSPSSSWSFGGPWSGSLYLH*FSLVAA
Trigger: CGCAGCTACAAGAGAGAACAAATGAAGATAGAGGCT...ACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATCGATAAAAATCAGTTaGTTCACGCCTTGTCCATCG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNESIKIS*FTPCPS
Trigger: CGATGGACAAGGCGTGAACAAACTGATTTTTATCGA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGCTTTCATCTGTCTTTTaGTCTAGTCGAGCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLLSSVF*SSRAKV
Trigger: CACTTTTGCTCGACTAGACAAAAAGACAGATGAAAG...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCAAAAGTCCTGATGTaGGCGTCGATGTCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTAKVLM*ASMSVR
Trigger: TCTTACAGACATCGACGCCAACATCAGGACTTTTGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGCATTCCCTCACCATaGATGAGATATGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTSIPSP*MRYGWL
Trigger: CAACCACCCATATCTCATCAATGGTGAGGGAATGCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGCACCCCAAATTAGGTaGGTTGAGTCAATGCATCCA +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTAPQIR*VESMHP
Trigger: TGGATGCATTGACTCAACCAACCTAATTTGGGGTGC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS TCA 90 bp ATGGTCTCCACATCTCGTTCAGTCATACGTCGCTTGAAGCGTCCATaGGATAAAATATCTCGCCATCGTCCCCAACCATATACCAGGAGA +
Preference number: 5 (lower is better)
Translates to: MVSTSRSVIRRLKRP*DKISRHRPQPYTRR
Trigger: TCTCCTGGTATATGGTTGGGGACGATGGCGAGATATTTTATCTCATGGACGCTTCAAGCGACGTATGACTGAACGAGATGTGGAGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS TCA 90 bp TCAGAGAGTCCAGGCCAAATAAATTTGGGTCATCGAACAGATCCATaGTGGGGTCTGCCATCTTGGGAAAGTAATGGAGGGTACTTCTCC +
Preference number: 5 (lower is better)
Translates to: SESPGQINLGHRTDP*WGLPSWESNGGYFS
Trigger: GGAGAAGTACCCTCCATTACTTTCCCAAGATGGCAGACCCCATCATGGATCTGTTCGATGACCCAAATTTATTTGGCCTGGACTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000646063.1
ENST00000646647.2
CDS GCA 90 bp TTTTTGTCTAGTCGAGCAAAAGTGCGGAAGCGATCCCAATGGAACTaGATGGTGTCAGGGTCATATTCCACACCAAACGTAGACACCACT +
Preference number: 5 (lower is better)
Translates to: FLSSRAKVRKRSQWN*MVSGSYSTPNVDTT
Trigger: AGTGGTGTCTACGTTTGGTGTGGAATATGACCCTGACACCATGCAGTTCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAGACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557329.1
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 90 bp GCATTACGGGTTAATATTAAGATAGAGAAAAGCCAGGCGCAGTGGTaGACAATGGTAGTCCCAGATACTCAGGAGGCTGAGGCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: ALRVNIKIEKSQAQW*TMVVPDTQEAEAEE
Trigger: TTCTTCTGCCTCAGCCTCCTGAGTATCTGGGACTACCATTGTGCACCACTGCGCCTGGCTTTTCTCTATCTTAATATTAACCCGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS GCA 90 bp TTACCTGCCCTGATTCATGGGACCCTAACTTACCATAGCATACAGTaGGGTAACACACTGCTAACAGTGATTAGAGAACAGATGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LPALIHGTLTYHSIQ*GNTLLTVIREQMGG
Trigger: GCCTCCCATCTGTTCTCTAATCACTGTTAGCAGTGTGTTACCGCACTGTATGCTATGGTAAGTTAGGGTCCCATGAATCAGGGCAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CCA 90 bp AAAGAACTGCATGGAAGGCAAAGTCTCGCCATCTGGTTCTTGCACTaGTTCAGGGAGGATAGGCTCAGGTTTTATTGGACCAGTTACATC +
Preference number: 5 (lower is better)
Translates to: KELHGRQSLAIWFLH*FREDRLRFYWTSYI
Trigger: GATGTAACTGGTCCAATAAAACCTGAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTGCCTTCCATGCAGTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000642914.1
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp TCTGTCTTTTTGTCTAGTCGAGCAAAAGTGCGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGGTCATATTCCACACCAAACGTAGAC +
Preference number: 5 (lower is better)
Translates to: SVFLSSRAKVRKRSQ*NCMVSGSYSTPNVD
Trigger: GTCTACGTTTGGTGTGGAATATGACCCTGACACCATGCAGTTCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAGACAAAAAGACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557329.1
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp AGAAACAAGTGCATGTCAGATTGTCCTGACCTTCATGGAGCAAGATaGCTACGTCTTCAGAGGAAGATGGTGGAACTCCTGCTCATACTG +
Preference number: 5 (lower is better)
Translates to: RNKCMSDCPDLHGAR*LRLQRKMVELLLIL
Trigger: CAGTATGAGCAGGAGTTCCACCATCTTCCTCTGAAGACGTAGCCATCTTGCTCCATGAAGGTCAGGACAATCTGACATGCACTTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553651.2
ENST00000643469.1
CDS CCA 90 bp TTTCCCAGAGAAAGCTCTCATGTGCTCACTCTCTCAAAGAGTTGCTaGGCCCTCTATGAAACCAAAATTCACCTCCCCCTTTCACTCAAG +
Preference number: 5 (lower is better)
Translates to: FPRESSHVLTLSKSC*ALYETKIHLPLSLK
Trigger: CTTGAGTGAAAGGGGGAGGTGAATTTTGGTTTCATAGAGGGCCCAGCAACTCTTTGAGAGAGTGAGCACATGAGAGCTTTCTCTGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCCGATTTGCTTTCTCTaGCTTCTTCTGGTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTPICFL*LLLVFQ
Trigger: TTGGAACACCAGAAGAAGCAAGAGAAAGCAAATCGG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCGCATAGAAAGCACTTaGTCTACAATGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRIEST*STMAAS
Trigger: AGATGCAGCCATTGTAGACAAAGTGCTTTCTATGCG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGTTAAATTCTCGAATCTaGCCCTCATCAACATCTTCT +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMELNSRI*PSSTSS
Trigger: AGAAGATGTTGATGAGGGCAAGATTCGAGAATTTAA...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGTTAAATTCTCGAATCTaGCCCTCATCAACATCTTCT +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLNSRI*PSSTSS
Trigger: AGAAGATGTTGATGAGGGCAAGATTCGAGAATTTAA...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCCGTCCCCGTGAATCTTaGCAGTACATTTCATACTGT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRPRES*QYISYC
Trigger: ACAGTATGAAATGTACTGCAAAGATTCACGGGGACG...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAAGACTATCAAGCAGCTaGCAATTACGGTTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNERLSSS*QLRFFS
Trigger: ACTGAAAAACCGTAATTGCAAGCTGCTTGATAGTCT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGATCCCCAAAGTCCTaGAGAAACTCTGATTCTGAG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRSPKS*RNSDSE
Trigger: CTCAGAATCAGAGTTTCTCAAGGACTTTGGGGATCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp AACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGATTACCAAATTATTCTaGCTGTTGAGCAGATCCATG +
Preference number: 5 (lower is better)
Translates to: NRLCQRLGPALHSLWLMEITKLF*LLSRSM
Trigger: CATGGATCTGCTCAACAGCAAGAATAATTTGGTAAT...CTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGGCCAGAGTAAATGAAAATACAGCAGCCGCCCAAGCAATGGGGCCCATGCTGATTACCAAATTATTCTaGCTGTTGAGCAGATCCATG +
Preference number: 5 (lower is better)
Translates to: RARVNENTAAAQAMGPMLITKLF*LLSRSM
Trigger: CATGGATCTGCTCAACAGCAAGAATAATTTGGTAAT...CAGCATGGGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAGATTCTGCAATTCTTTaGTCTTGCCATTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEDSAIL*SCHFQL
Trigger: CAGCTGAAAATGGCAAGACAAAAGAATTGCAGAATC...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGGAGGTGACTAGGGAGCTTATAACTTTCATCTaGGAACAAAGTGTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: QRLGPALHSLWLMEVTRELITFI*EQSVRV
Trigger: AACCCTGACACTTTGTTCCAAGATGAAAGTTATAAG...CTCCCTAGTCACCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp AGGAACAGGCTCTGCCAGAGGCTAGGGCCAGCGCTACATAGTCTGTGGTTAATGCTTATAACTTTCATCTaGGAACAAAGTGTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: RNRLCQRLGPALHSLWLMLITFI*EQSVRV
Trigger: AACCCTGACACTTTGTTCCAAGATGAAAGTTATAAG...CATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTGGCAGAGCCTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGGATCTTTGTCCCACCAAGTTGTaGGAACCTCCAGTTGATCCA +
Preference number: 5 (lower is better)
Translates to: PHHLGPLGDLGVVYIQDLCPTKL*EPPVDP
Trigger: TGGATCAACTGGAGGTTCCAACAACTTGGTGGGACA...AAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CAA 90 bp CAACCCCTTCTACTATGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTGCAACATCATCTTGGTCCTTaGGGGGACCTTGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: QPLLLCQRSYPTLDVLLQHHLGP*GDLGVV
Trigger: AACCACTCCAAGGTCCCCCAAAGGACCAAGATGATG...TTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACATAGTAGAAGGGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CAA 90 bp AAGTTGTTGGAACCTCCAGTTGATCCACTACTGGGAACCATATGTCAATCTCACATCACCCTCATCATCTaGGTCCTTTGGGGGACCTTG +
Preference number: 5 (lower is better)
Translates to: KLLEPPVDPLLGTICQSHITLII*VLWGTL
Trigger: CAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGAT...GTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCGTGCCGGTTAGCACTTaGGTAAAAGTGACTTTTCCA +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTVPVST*VKVTFP
Trigger: TGGAAAAGTCACTTTTACCAAAGTGCTAACCGGCAC...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS CCA 90 bp TCTATCAGGATGGAGATGCACTATGCACTACCTCTAATGGTAAGTTaGGGTCTTACCCATATACCAGGAGATGCTTTTCCACCCGAAAGC +
Preference number: 5 (lower is better)
Translates to: SIRMEMHYALPLMVS*GLTHIPGDAFPPES
Trigger: GCTTTCGGGTGGAAAAGCATCTCCTGGTATATGGGTAAGACCCCAACTTACCATTAGAGGTAGTGCATAGTGCATCTCCATCCTGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CCA 90 bp CTCACTGTCCCACCAAGTTGTTGGAACCTCCAGTTGATCCACTACTaGGAACCATATGTCAATCTCACTAAAGGTATAAGAGGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: LTVPPSCWNLQLIHY*EPYVNLTKGIRGQS
Trigger: ACTCTGCCCTCTTATACCTTTAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCATGTTTTACTCTTCTTaGGCTTCTCCTCTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTMFYSS*ASPLSA
Trigger: GGCTGAAAGAGGAGAAGCCAAAGAAGAGTAAAACAT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAATTAAATTCTCGAATCTaGCCCTCATCAACATCTTCT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELNSRI*PSSTSS
Trigger: AGAAGATGTTGATGAGGGCAAGATTCGAGAATTTAA...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CCTCCTGCCTCAGGTAGTATAGCATTCGTACCCGCAACAGTACCTTGTTACACTCTTCTTAGAGAACTGTaGGATTCCAGTAATGTTGCC +
Preference number: 5 (lower is better)
Translates to: PPASGSIAFVPATVPCYTLLREL*DSSNVA
Trigger: GGCAACATTACTGGAATCCAACAGTTCTCTAAGAAG...AGTGTAACAAGGTACTGTTGCGGGTACGAATGCTATACTACCTGAGGCAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAAATTACCAAATTATTCTaGCTGTTGAGCAGATCCATG +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNEITKLF*LLSRSM
Trigger: CATGGATCTGCTCAACAGCAAGAATAATTTGGTAAT...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS-3UTR CAA 90 bp CATCATCAAGGGATCACCCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTGGCTTATAACTTTCATCTaGGAACAAAGTGTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: HHQGITLIILVLWGTLEWLITFI*EQSVRV
Trigger: AACCCTGACACTTTGTTCCAAGATGAAAGTTATAAG...CCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGGTGATCCCTTGATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS-3UTR CAA 90 bp ACATCTCCCCTGCCCCTCCCACGTTTCCATAGTCCAAGGGCCAGAGTAAATGAACTTATAACTTTCATCTaGGAACAAAGTGTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: TSPLPLPRFHSPRARVNELITFI*EQSVRV
Trigger: AACCCTGACACTTTGTTCCAAGATGAAAGTTATAAG...TTCATTTACTCTGGCCCTTGGACTATGGAAACGTGGGAGGGGCAGGGGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645929.1
ENST00000646647.2
CDS TCA 90 bp AACCCAATTTCCTTTGAGGGTCCTACACTAGGCAAACTGAGGGTGTaGTCGTCAAAGAGAAATTTCTCAGTCATGATGGAATGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: NPISFEGPTLGKLRV*SSKRNFSVMMEWGG
Trigger: ACCTCCCCATTCCATCATGACTGAGAAATTTCTCTTTGACGATCACACCCTCAGTTTGCCTAGTGTAGGACCCTCAAAGGAAATTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCAGACTATCAAGCAGCTaGCAATTACGGTTTTTCAGT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTRLSSS*QLRFFS
Trigger: ACTGAAAAACCGTAATTGCAAGCTGCTTGATAGTCT...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTCTTCTACAGTATTTaGCAATGGTGTTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTFFYSI*QWCSCE
Trigger: CTCACAGGAACACCATTGCAAAATACTGTAGAAGAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGTTATCCAACACTCGATGTTCTGCTGCAATTGCTTTGTCATCTGTGTTGGAACCTCCAGTaGATCCACTACTGGGAACCA +
Preference number: 5 (lower is better)
Translates to: CQRSYPTLDVLLQLLCHLCWNLQ*IHYWEP
Trigger: TGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACA...CAGATGACAAAGCAATTGCAGCAGAACATCGAGTGTTGGATAACTTCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS TCA 90 bp TGGCCTGGCTGTTGGGTCACCTGGGCTGTGGAAAACAAAGTAGAATaGATAGGAAGTATAGCAAGGGTAGTAGAGGCAATACTAGTATTT +
Preference number: 5 (lower is better)
Translates to: WPGCWVTWAVENKVE*IGSIARVVEAILVF
Trigger: AAATACTAGTATTGCCTCTACTACCCTTGCTATACTTCCTATTCATTCTACTTTGTTTTCCACAGCCCAGGTGACCCAACAGCCAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS TCA 90 bp GTATTCATTAAGCCAACTGTTTCACATGCCCCTCAGATCTTCATGTaGGAAGTTTTGTTAAACTCACTGGCACCCAAACCAGGGCAACAC +
Preference number: 5 (lower is better)
Translates to: VFIKPTVSHAPQIFM*EVLLNSLAPKPGQH
Trigger: GTGTTGCCCTGGTTTGGGTGCCAGTGAGTTTAACAAAACTTCTCACATGAAGATCTGAGGGGCATGTGAAACAGTTGGCTTAATGAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS GCA 90 bp GCAAGAAGCTCTGGGAAATCAAAACTGGATTCTCAGGCTGCAGGGTaGAATATAATTCACACTAGAAGCAACCCGTTAGTGCAAAAATGC +
Preference number: 5 (lower is better)
Translates to: ARSSGKSKLDSQAAG*NIIHTRSNPLVQKC
Trigger: GCATTTTTGCACTAACGGGTTGCTTCTAGTGTGAATTATATTGCACCCTGCAGCCTGAGAATCCAGTTTTGATTTCCCAGAGCTTCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS CCA 90 bp ATCTGGTTCTTGCACTGGTTCAGGGAGGATAGGCTCAGGTTTTATTaGACCAGTTACATCCACCTCTTCTTCTTCTTCATCATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: IWFLHWFREDRLRFY*TSYIHLFFFFIICD
Trigger: ATCACAGATGATGAAGAAGAAGAAGAGGTGGATGTAACTGGTCCAATAAAACCTGAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000642914.1
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp AGAAACAAGTGCATGTCAGATTGTCCTGACCTTCATGGAGCAAGATaGCTACGTCTTCAGAGGAAGATGGTGGAACTCTTTCGATATGTA +
Preference number: 5 (lower is better)
Translates to: RNKCMSDCPDLHGAR*LRLQRKMVELFRYV
Trigger: TACATATCGAAAGAGTTCCACCATCTTCCTCTGAAGACGTAGCCATCTTGCTCCATGAAGGTCAGGACAATCTGACATGCACTTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556833.1
CDS CCA 90 bp CAAGAATCCACTGAGAAAAACCTGTCCACTAGTGGCAAGAAGCTCTaGGAAATCAAAACTGGATTCTCAGGCTGCAGGGTGCAATATAAT +
Preference number: 5 (lower is better)
Translates to: QESTEKNLSTSGKKL*EIKTGFSGCRVQYN
Trigger: ATTATATTGCACCCTGCAGCCTGAGAATCCAGTTTTGATTTCCCAGAGCTTCTTGCCACTAGTGGACAGGTTTTTCTCAGTGGATTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS-3UTR CAA 90 bp TGCCTTCTGGGTTCAAGCAATCCTCCAAGCTCAGTCTCCAAAGTAGCTAGAACCTTAAATTCTCGAATCTaGCCCTCATCAACATCTTCT +
Preference number: 5 (lower is better)
Translates to: CLLGSSNPPSSVSKVARTLNSRI*PSSTSS
Trigger: AGAAGATGTTGATGAGGGCAAGATTCGAGAATTTAA...GGTTCTAGCTACTTTGGAGACTGAGCTTGGAGGATTGCTTGAACCCAGAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS-3UTR CAA 90 bp ATCTTGGAACAAAGTGTCAGGGTTATATTTCCGGATCCAATCTGCCTTATGGATCCGACCACTCATGGATaGAAGCACAGCCTTATCCAA +
Preference number: 5 (lower is better)
Translates to: ILEQSVRVIFPDPICLMDPTTHG*KHSLIQ
Trigger: TTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCGG...ATCCATAAGGCAGATTGGATCCGGAAATATAACCCTGACACTTTGTTCCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS GCA 90 bp TTTGAAAGGCAAACCAAGAGTATCTATCAGGATGGAGATGCACTATaGACTACCTCTAATGGTAAGTTGGGGTCTTACCCATATACCAGG +
Preference number: 5 (lower is better)
Translates to: FERQTKSIYQDGDAL*TTSNGKLGSYPYTR
Trigger: CCTGGTATATGGGTAAGACCCCAACTTACCATTAGAGGTAGTGCATAGTGCATCTCCATCCTGATAGATACTCTTGGTTTGCCTTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CCA 90 bp GTATCACACAATTATTGTGAACTCTTGCTTAATATCTGTCTTTCCTaGCAGACGGTGAGCTCTGTAAGGACAGGGACTGTGTTTGCCTTA +
Preference number: 5 (lower is better)
Translates to: VSHNYCELLLNICLS*QTVSSVRTGTVFAL
Trigger: TAAGGCAAACACAGTCCCTGTCCTTACAGAGCTCACCGTCTGCCAGGAAAGACAGATATTAAGCAAGAGTTCACAATAATTGTGTGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS-3UTR CAA 90 bp ATCTTGGAACAAAGTGTCAGGGTTATATTTCCGGATCCAATCTGCCTTATGGATGCAATTTCTTTCAGCTaGAAGGCTGCTTCACAACGC +
Preference number: 5 (lower is better)
Translates to: ILEQSVRVIFPDPICLMDAISFS*KAASQR
Trigger: GCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGC...ATCCATAAGGCAGATTGGATCCGGAAATATAACCCTGACACTTTGTTCCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555962.6
CDS TCA 90 bp GGGGTGACAAGCTTTTTGCACAGATCACGTACTAGTTCTTGTACTTaGCAAAGAATTCTTCTGCTTCAGTATATTGTCCAGAAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: GVTSFLHRSRTSSCT*QRILLLQYIVQKGA
Trigger: AGCTCCCTTCTGGACAATATACTGAAGCAGAAGAATTCTTTGTCAAGTACAAGAACTAGTACGTGATCTGTGCAAAAAGCTTGTCACCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS TCA 90 bp ACACTGCTAACAGTGATTAGAGAACAGATGGGAGGCTCCCTACCTTaGGATTTACCTATCCATCTGGCCCTTCTTGAACATCTATTTATA +
Preference number: 5 (lower is better)
Translates to: TLLTVIREQMGGSLP*DLPIHLALLEHLFI
Trigger: TATAAATAGATGTTCAAGAAGGGCCAGATGGATAGGTAAATCTCAAGGTAGGGAGCCTCCCATCTGTTCTCTAATCACTGTTAGCAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CCA 90 bp AGAATTCCTTACCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTCACAATCTTTATCAAAGTCAACCCC +
Preference number: 5 (lower is better)
Translates to: RIPYLIILVLWGTLE*FIFRIFTIFIKVNP
Trigger: GGGGTTGACTTTGATAAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGTAAGGAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS GCA 90 bp ACAATGCAGATAGGAGTAGTTCTTGTACTTGACAAAGAATTCTTCTaGTTCAGTATATTGTCCAGAAGGGAGCTCCTTCTTCACAATCCG +
Preference number: 5 (lower is better)
Translates to: TMQIGVVLVLDKEFF*FSILSRRELLLHNP
Trigger: CGGATTGTGAAGAAGGAGCTCCCTTCTGGACAATATACTGAAGCAGAAGAATTCTTTGTCAAGTACAAGAACTACTCCTATCTGCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 90 bp AAGAACAGGACAGCTATGTCTCCAGTAGTTCTCTTTTTACTGATGTaGGTGGTAGGAGGTAGTGAGAAATCTCTTTCACACTACAGTAAT +
Preference number: 5 (lower is better)
Translates to: KNRTAMSPVVLFLLM*VVGGSEKSLSHYSN
Trigger: ATTACTGTAGTGTGAAAGAGATTTCTCACTACCTCCTACCACCCACATCAGTAAAAAGAGAACTACTGGAGACATAGCTGTCCTGTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS CCA 90 bp AGTGAGACTCAAATGAGAATTCCTTACCTCATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTTATATTCAGGATCTTCACAATCTTT +
Preference number: 5 (lower is better)
Translates to: SETQMRIPYLIILVL*GTLEWFIFRIFTIF
Trigger: AAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGTAAGGAATTCTCATTTGAGTCTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS TCA 90 bp AAATACAGGCTTAAATTGGGAGACAGTCTCTTAGGTCAGTGCTTCTaGAACTCTAATTTGTATACAAACCACCTGGTATGGGATGTGCTT +
Preference number: 5 (lower is better)
Translates to: KYRLKLGDSLLGQCF*NSNLYTNHLVWDVL
Trigger: AAGCACATCCCATACCAGGTGGTTTGTATACAAATTAGAGTTTCAGAAGCACTGACCTAAGAGACTGTCTCCCAATTTAAGCCTGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS CCA 90 bp AAATCAGAGAATTCCACCAGGTCATCATCTTTCAGAGTGCTAAAGTaGCGCGTTTGTTTTCGTACTCTAGGTGTGTCAATTACCAAATTA +
Preference number: 5 (lower is better)
Translates to: KSENSTRSSSFRVLK*RVCFRTLGVSITKL
Trigger: TAATTTGGTAATTGACACACCTAGAGTACGAAAACAAACGCGCCACTTTAGCACTCTGAAAGATGATGACCTGGTGGAATTCTCTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646558.1
ENST00000646647.2
CDS CCA 90 bp ACATGGAAGGGAAAGAGAGGACACTCAATTATGACAAGAATTATGTaGCAAGCCATCACTTTTCTGTCAACACTGCTTAAAGCTAATGGT +
Preference number: 5 (lower is better)
Translates to: TWKGKRGHSIMTRIM*QAITFLSTLLKANG
Trigger: ACCATTAGCTTTAAGCAGTGTTGACAGAAAAGTGATGGCTTGCCACATAATTCTTGTCATAATTGAGTGTCCTCTCTTTCCCTTCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS GCA 90 bp TCTCTTTCACACTACAGTAATACAAAATCAGGACAAATATATGAATaGAGAGTCACAGCTTTTAAAGGTAACTCCCAGCACAGTAACTAT +
Preference number: 5 (lower is better)
Translates to: SLSHYSNTKSGQIYE*RVTAFKGNSQHSNY
Trigger: ATAGTTACTGTGCTGGGAGTTACCTTTAAAAGCTGTGACTCTGCATTCATATATTTGTCCTGATTTTGTATTACTGTAGTGTGAAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS TCA 72 bp GGGCGGAAGCTGCAGGCCGAGAGGCCCGACAAGCCCTaGAGGAGAAAACGAGCTGTGCCTCACCCCAGTGGA +
Preference number: 6 (lower is better)
Translates to: GRKLQAERPDKP*RRKRAVPHPSG
Trigger: TCCACTGGGGTGAGGCACAGCTCGTTTTCTCCTTCAGGGCTTGTCGGGCCTCTCGGCCTGCAGCTTCCGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553283.1
CDS TCA 72 bp AGCTGCTTTACTGGTCGGCTGGGCTGGACAATGCGCTaGACAGCAGCCTGGTTCCCAGGGACCTTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: SCFTGRLGWTMR*TAAWFPGTLAA
Trigger: GGCCGCCAAGGTCCCTGGGAACCAGGCTGCTGTTCAGCGCATTGTCCAGCCCAGCCGACCAGTAAAGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp CGCAGGGGCAGTGGTGAGGCAGTGCGTGAGGTATACTaGTGGTGCAGCAGTGGAGTAGAGCAGCGTGACAAG +
Preference number: 6 (lower is better)
Translates to: RRGSGEAVREVY*WCSSGVEQRDK
Trigger: CTTGTCACGCTGCTCTACTCCACTGCTGCACCAGCAGTATACCTCACGCACTGCCTCACCACTGCCCCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 72 bp CGATTCACCCTGGGTAGGTGTAGAGGTCAGTGTAACTaGAGGCTTCAGTGGGGGCCCTGTGGCCCCAGGGTT +
Preference number: 6 (lower is better)
Translates to: RFTLGRCRGQCN*RLQWGPCGPRV
Trigger: AACCCTGGGGCCACAGGGCCCCCACTGAAGCCTGCAGTTACACTGACCTCTACACCTACCCAGGGTGAATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 90 bp CTGCTGCACCTGCAGCTGGATAGTTACTACCTTGGCAGGCTGCCCTaGGGCATTCTTGGCTTGAGTCAGGGCTGCCAGCTGGTTGCCCTG +
Preference number: 6 (lower is better)
Translates to: LLHLQLDSYYLGRLP*GILGLSQGCQLVAL
Trigger: CAGGGCAACCAGCTGGCAGCCCTGACTCAAGCCAAGAATGCCCAAGGGCAGCCTGCCAAGGTAGTAACTATCCAGCTGCAGGTGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000430710.8
ENST00000553283.1
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp ACATGCCGATGTCCTTGGGGACCTCCAGACTGTGGCTaGTGGAGGACCAGGGTGATGCGTTTCGATTCACCC +
Preference number: 6 (lower is better)
Translates to: TCRCPWGPPDCG*WRTRVMRFDSP
Trigger: GGGTGAATCGAAACGCATCACCCTGGTCCTCCAGCAGCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000430710.8
ENST00000553283.1
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp CCATGGCGGGCTGCCCCTCTTAGAAGCTCCCCATCATaGCGAACAGGCTCCCACCATTTGGGCAATTCAGGA +
Preference number: 6 (lower is better)
Translates to: PWRAAPLRSSPS*RTGSHHLGNSG
Trigger: TCCTGAATTGCCCAAATGGTGGGAGCCTGTTCGGCATGATGGGGAGCTTCTAAGAGGGGCAGCCCGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp AGAGGCCCGACAAGCCCTGAAGGAGAAAACGAGCTGTaGCTCACCCCAGTGGAGGAGAGAGGTGGCTTTACC +
Preference number: 6 (lower is better)
Translates to: RGPTSPEGENEL*LTPVEERGGFT
Trigger: GGTAAAGCCACCTCTCTCCTCCACTGGGGTGAGGCACAGCTCGTTTTCTCCTTCAGGGCTTGTCGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553283.1
CDS GCA 72 bp TCAAGTCACCTGGGTAGGTGTAGAGGTCAGTGTAACTaGAGGCTTCAGTGGGGGCCCTGTGGCCCCAGGGTT +
Preference number: 6 (lower is better)
Translates to: SSHLGRCRGQCN*RLQWGPCGPRV
Trigger: AACCCTGGGGCCACAGGGCCCCCACTGAAGCCTGCAGTTACACTGACCTCTACACCTACCCAGGTGACTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS CCA 72 bp TGGTCGCATCCTACGGGCCCGCTTCTTGCTGCTCTCTaGTGCAATAGGCCCTGGCAAAACCCGGTTGAACAC +
Preference number: 6 (lower is better)
Translates to: WSHPTGPLLAAL*CNRPWQNPVEH
Trigger: GTGTTCAACCGGGTTTTGCCAGGGCCTATTGCACCAGAGAGCAGCAAGAAGCGGGCCCGTAGGATGCGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp GGTGGGGGTGGTGGTGGTGGTGATGAAGCATGGTGCTaGAGTCTACATGAGGGGATGATGGTGCACCACCCA +
Preference number: 6 (lower is better)
Translates to: GGGGGGGDEAWC*SLHEGMMVHHP
Trigger: TGGGTGGTGCACCATCATCCCCTCATGTAGACTCCAGCACCATGCTTCATCACCACCACCACCACCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp ACCCACTCTGCAATCTTGCTTACCATCTCCAGCTGCTaGGGGAAGGCGGCATACTTGGCGGCACATGGCCAC +
Preference number: 6 (lower is better)
Translates to: THSAILLTISSC*GKAAYLAAHGH
Trigger: GTGGCCATGTGCCGCCAAGTATGCCGCCTTCCCCCAGCAGCTGGAGATGGTAAGCAAGATTGCAGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS CAA 72 bp CAGAGGGGGATACTCGCATCTCATAGTCTTGTGGGGTaGGTCGGCTCCTGGCCACCACCTCGTGCTCTAGCT +
Preference number: 6 (lower is better)
Translates to: QRGILASHSLVG*VGSWPPPRALA
Trigger: AGCTAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCCCACAAGACTATGAGATGCGAGTATCCCCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS TCA 72 bp GGCTCCCACCATTTGGGCAATTCAGGACCAGGAGGCTaGCACAATGCCAGCCGATCTTCCAAAAGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: GSHHLGNSGPGG*HNASRSSKRGW
Trigger: CCACCCCCTTTTGGAAGATCGGCTGGCATTGTGTCAGCCTCCTGGTCCTGAATTGCCCAAATGGTGGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp GGCAACTCGTCCTCATTTAAGACTCGAGGTATGTTCTaGTCACCGCGGGCACGGGCTCTCGCAATGGCCTCT +
Preference number: 6 (lower is better)
Translates to: GNSSSFKTRGMF*SPRARALAMAS
Trigger: AGAGGCCATTGCGAGAGCCCGTGCCCGCGGTGAGCAGAACATACCTCGAGTCTTAAATGAGGACGAGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp AGTCAGTGCGCCCATAGGCATGATGACGGTCATGTCTaGGGGAGCGTGGCCGCTCATCATCCTCACTTTCCA +
Preference number: 6 (lower is better)
Translates to: SQCAHRHDDGHV*GSVAAHHPHFP
Trigger: TGGAAAGTGAGGATGATGAGCGGCCACGCTCCCGCAGACATGACCGTCATCATGCCTATGGGCGCACTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646558.1
ENST00000646647.2
CDS GCA 72 bp GGCAGTGGTGAGGCAGTGCGTGAGGTATACTGCTGGTaGAGCAGTGGAGTAGAGCAGCGTGACAAGGATGGA +
Preference number: 6 (lower is better)
Translates to: GSGEAVREVYCW*SSGVEQRDKDG
Trigger: TCCATCCTTGTCACGCTGCTCTACTCCACTGCTGCACCAGCAGTATACCTCACGCACTGCCTCACCACTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 72 bp GCGAAGTTTGGTGAACTGGGCTGCCGCTGTGCTGACTaGAGATGCTTCCTCCTCTGCCATGGAAGCTGCACT +
Preference number: 6 (lower is better)
Translates to: AKFGELGCRCAD*RCFLLCHGSCT
Trigger: AGTGCAGCTTCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 72 bp TTCATCCATGCCTCGGCGAAGTTTGGTGAACTGGGCTaGCGCTGTGCTGACTGCAGATGCTTCCTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: FIHASAKFGELG*RCADCRCFLLC
Trigger: GCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAGGCATGGATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp AGGGGCAGTGGTGAGGCAGTGCGTGAGGTATACTGCTaGTGCAGCAGTGGAGTAGAGCAGCGTGACAAGGAT +
Preference number: 6 (lower is better)
Translates to: RGSGEAVREVYC*CSSGVEQRDKD
Trigger: ATCCTTGTCACGCTGCTCTACTCCACTGCTGCACCAGCAGTATACCTCACGCACTGCCTCACCACTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp TCAGCAAGGGAGTGCTGCCCTGCTCCGTTTCCAACCTaGGCCAATTCATCCCTCCTTAGGCAACCTGGTGGT +
Preference number: 6 (lower is better)
Translates to: SARECCPAPFPT*ANSSLLRQPGG
Trigger: ACCACCAGGTTGCCTAAGGAGGGATGAATTGGCCCAGGTTGGAAACGGAGCAGGGCAGCACTCCCTTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS CCA 72 bp CTAGCTGTTAGGGCAGAGCCCGGAGGCCAGAATAAATaGCCTGGCTGTTGGGTCACCTGGGCTGTGGAAAAC +
Preference number: 6 (lower is better)
Translates to: LAVRAEPGGQNK*PGCWVTWAVEN
Trigger: GTTTTCCACAGCCCAGGTGACCCAACAGCCAGGCCATTTATTCTGGCCTCCGGGCTCTGCCCTAACAGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS CAA 72 bp GGGTTCATCTCCAGCTGCTGGGGGAAGGCGGCATACTaGGCGGCACATGGCCACAAAGCCATGGAAGTACTT +
Preference number: 6 (lower is better)
Translates to: GFISSCWGKAAY*AAHGHKAMEVL
Trigger: AAGTACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCCCCCAGCAGCTGGAGATGAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557329.1
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 72 bp GCAGCCAGAAAAGAGAAGTCTGGGTCCTGCATGATGTaGCAGTCTGTTTGGCTCACCCCATGGCGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: AARKEKSGSCMM*QSVWLTPWRAA
Trigger: GGCAGCCCGCCATGGGGTGAGCCAAACAGACTGCAACATCATGCAGGACCCAGACTTCTCTTTTCTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 72 bp GGTAGTATCAGAGGGGGATACTCGCATCTCATAGTCTaGTGGGGTTGGTCGGCTCCTGGCCACCACCTCGTG +
Preference number: 6 (lower is better)
Translates to: GSIRGGYSHLIV*WGWSAPGHHLV
Trigger: CACGAGGTGGTGGCCAGGAGCCGACCAACCCCACAAGACTATGAGATGCGAGTATCCCCCTCTGATACTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CAA 90 bp GGCTCAGGATCTCCTGGCTCTTGGAGACTTGCAAAAGTCCTGATGTaGGCGTCGATGTCTGTAAGACAGGTTGGGCTGGCTGCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: GSGSPGSWRLAKVLM*ASMSVRQVGLAAPG
Trigger: GCCAGGAGCAGCCAGCCCAACCTGTCTTACAGACATCGACGCCAACATCAGGACTTTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS TCA 72 bp GGTGGGGCCTTAAGGATAACAATCTTAGGGGCTGACTaGGGTGGCTGCCCTCCAGCACTACTGGAGGAGACA +
Preference number: 6 (lower is better)
Translates to: GGALRITILGAD*GGCPPALLEET
Trigger: TGTCTCCTCCAGTAGTGCTGGAGGGCAGCCACCTCAGTCAGCCCCTAAGATTGTTATCCTTAAGGCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS TCA 72 bp GCTTGGTGGGGCCTTAAGGATAACAATCTTAGGGGCTaGCTGAGGTGGCTGCCCTCCAGCACTACTGGAGGA +
Preference number: 6 (lower is better)
Translates to: AWWGLKDNNLRG*LRWLPSSTTGG
Trigger: TCCTCCAGTAGTGCTGGAGGGCAGCCACCTCAGTCAGCCCCTAAGATTGTTATCCTTAAGGCCCCACCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp GCTGACTGCAGATGCTTCCTCCTCTGCCATGGAAGCTaGACTACTACTTCGTGGTGTGGGGACTGGAGAGTC +
Preference number: 6 (lower is better)
Translates to: ADCRCFLLCHGS*TTTSWCGDWRV
Trigger: GACTCTCCAGTCCCCACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAGCATCTGCAGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp GAAGCTCCCCATCATGCCGAACAGGCTCCCACCATTTaGGCAATTCAGGACCAGGAGGCTGACACAATGCCA +
Preference number: 6 (lower is better)
Translates to: EAPHHAEQAPTI*AIQDQEADTMP
Trigger: TGGCATTGTGTCAGCCTCCTGGTCCTGAATTGCCCAAATGGTGGGAGCCTGTTCGGCATGATGGGGAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp TCCTTTTCATCCATGCCTCGGCGAAGTTTGGTGAACTaGGCTGCCGCTGTGCTGACTGCAGATGCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SFSSMPRRSLVN*AAAVLTADASS
Trigger: GGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAGGCATGGATGAAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CAA 72 bp GATGCGTTTCGATTCACCCTGCTCATACTGCCGGGGTaGGTGCCAGTAAGGTCCATACAGCAGAGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: DAFRFTLLILPG*VPVRSIQQRRK
Trigger: CTTCCGCCTCTGCTGTATGGACCTTACTGGCACCAACCCCGGCAGTATGAGCAGGGTGAATCGAAACGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553283.1
CDS CAA 72 bp CTTACCATCTCCAGCTGCTGGGGGAAGGCGGCATACTaGGCGGCACATGGCCACAAAGCCATGGAAGTACTT +
Preference number: 6 (lower is better)
Translates to: LTISSCWGKAAY*AAHGHKAMEVL
Trigger: AAGTACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCCCCCAGCAGCTGGAGATGGTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS CAA 72 bp CTTCTGTTGGCATCCATCCTCACCCACTCTGCAATCTaGCTTACCATCTCCAGCTGCTGGGGGAAGGCGGCA +
Preference number: 6 (lower is better)
Translates to: LLLASILTHSAI*LTISSCWGKAA
Trigger: TGCCGCCTTCCCCCAGCAGCTGGAGATGGTAAGCAAGATTGCAGAGTGGGTGAGGATGGATGCCAACAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS CAA 72 bp AGGAAGATGGTGGAACTCCTGCTCATACTGCCGGGGTaGGTGCCAGTAAGGTCCATACAGCAGAGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: RKMVELLLILPG*VPVRSIQQRRK
Trigger: CTTCCGCCTCTGCTGTATGGACCTTACTGGCACCAACCCCGGCAGTATGAGCAGGAGTTCCACCATCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000555962.6
ENST00000642518.1
ENST00000643469.1
ENST00000646340.1
CDS CAA 90 bp CTTGTCCATCGTTGTTGTTTCTCCCGCCGTGCAATTTCTTTCAGCTaGAAGGCTGCTTCACAACGCCGCCTTCGCCGGTCCCCACGTTCT +
Preference number: 6 (lower is better)
Translates to: LVHRCCFSRRAISFS*KAASQRRLRRSPRS
Trigger: AGAACGTGGGGACCGGCGAAGGCGGCGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGCACGGCGGGAGAAACAACAACGATGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 90 bp GCAATCTTGCTTACCATCTCCAGCTGCTGGGGGAAGGCGGCATACTaGGCGGCACATGGCCACAAAGCCATGGAAGTACTTGGTAAGGCT +
Preference number: 6 (lower is better)
Translates to: AILLTISSCWGKAAY*AAHGHKAMEVLGKA
Trigger: AGCCTTACCAAGTACTTCCATGGCTTTGTGGCCATGTGCCGCCAAGTATGCCGCCTTCCCCCAGCAGCTGGAGATGGTAAGCAAGATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS CAA 90 bp ACAGAGTTGCTTCTGTTGGCATCCATCCTCACCCACTCTGCAATCTaGCTTACCATCTCCAGCTGCTGGGGGAAGGCGGCATACTTGGCG +
Preference number: 6 (lower is better)
Translates to: TELLLLASILTHSAI*LTISSCWGKAAYLA
Trigger: CGCCAAGTATGCCGCCTTCCCCCAGCAGCTGGAGATGGTAAGCAAGATTGCAGAGTGGGTGAGGATGGATGCCAACAGAAGCAACTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS CAA 90 bp GGAGTCCAGAGAGCTTGGCAGTCCAAGGGCTTCCTCAATGGGGTCTaGTGTGACCTGGTTAAAGCTGTCATCAGTCAGAGAGTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: GVQRAWQSKGFLNGV*CDLVKAVISQRVQA
Trigger: GGCCTGGACTCTCTGACTGATGACAGCTTTAACCAGGTCACACAAGACCCCATTGAGGAAGCCCTTGGACTGCCAAGCTCTCTGGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS TCA 72 bp CATTTCCTGGCTCCTACGGCTAGAAGGCCACTTCCCTaGGAGTACAGCCTGGCAGACGAGGTCAATACGGTT +
Preference number: 6 (lower is better)
Translates to: HFLAPTARRPLP*EYSLADEVNTV
Trigger: AACCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCTAGCCGTAGGAGCCAGGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS TCA 72 bp ATGACAGGGATCCGGGTCTCCAGGTCCACATCAAGGTaGTTAGGCTCTTCCATGCACTCCACCTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: MTGIRVSRSTSR*LGSSMHSTSSS
Trigger: AGAGCTGGAGGTGGAGTGCATGGAAGAGCCTAATCACCTTGATGTGGACCTGGAGACCCGGATCCCTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS TCA 72 bp GAGTGCAGTGGCTATTCACAGGCACAACACTACTGCTaGTCAGCAAGGGAGTGCTGCCCTGCTCCGTTTCCA +
Preference number: 6 (lower is better)
Translates to: ECSGYSQAQHYC*SARECCPAPFP
Trigger: TGGAAACGGAGCAGGGCAGCACTCCCTTGCTGATCAGCAGTAGTGTTGTGCCTGTGAATAGCCACTGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS GCA 72 bp AACACTATCTTGCCTGGTAGACTCCCTAGCACAACATaGCGATGTCCTTGGGGACCTCCAGACTGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: NTILPGRLPSTT*RCPWGPPDCGC
Trigger: GCAGCCACAGTCTGGAGGTCCCCAAGGACATCGGCATGTTGTGCTAGGGAGTCTACCAGGCAAGATAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000430710.8
ENST00000553283.1
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp TCAGGGCTGCCAGCTGGTTGCCCTGTAACACTATCTTaGCTGGTAGACTCCCTAGCACAACATGCCGATGTC +
Preference number: 6 (lower is better)
Translates to: SGLPAGCPVTLS*LVDSLAQHADV
Trigger: GACATCGGCATGTTGTGCTAGGGAGTCTACCAGGCAAGATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000430710.8
ENST00000553283.1
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp ATACCAGGAGATGCTTTTCCACCCGAAAGCAGTCAGTaGGCCCATAGGCATGATGACGGTCATGTCTGCGGG +
Preference number: 6 (lower is better)
Translates to: IPGDAFPPESSQ*AHRHDDGHVCG
Trigger: CCCGCAGACATGACCGTCATCATGCCTATGGGCGCACTGACTGCTTTCGGGTGGAAAAGCATCTCCTGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646558.1
ENST00000646647.2
CDS GCA 72 bp TTTGGTGAACTGGGCTGCCGCTGTGCTGACTGCAGATaGTTCCTCCTCTGCCATGGAAGCTGCACTACTACT +
Preference number: 6 (lower is better)
Translates to: FGELGCRCADCR*FLLCHGSCTTT
Trigger: AGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAAGCATCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 72 bp TTCTGTTGGCATCCATCCTCACCCACTCTGCAATCTTaGTTACCATCTCCAGCTGCTGGGGGAAGGCGGCAT +
Preference number: 6 (lower is better)
Translates to: FCWHPSSPTLQS*LPSPAAGGRRH
Trigger: ATGCCGCCTTCCCCCAGCAGCTGGAGATGGTAAGCAAGATTGCAGAGTGGGTGAGGATGGATGCCAACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS GCA 72 bp ACAACACTACTGCTGATCAGCAAGGGAGTGCTGCCCTaGTCCGTTTCCAACCTGGGCCAATTCATCCCTCCT +
Preference number: 6 (lower is better)
Translates to: TTLLLISKGVLP*SVSNLGQFIPP
Trigger: AGGAGGGATGAATTGGCCCAGGTTGGAAACGGAGCAGGGCAGCACTCCCTTGCTGATCAGCAGTAGTGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS CCA 72 bp AGAACTTTAACTACAGAGAGCCCAGAAGAGGCCCCTTaGGAAGAGCCAGCCTGTGGCTGCAGTACCACCTTG +
Preference number: 6 (lower is better)
Translates to: RTLTTESPEEAP*EEPACGCSTTL
Trigger: CAAGGTGGTACTGCAGCCACAGGCTGGCTCTTCCCAAGGGGCCTCTTCTGGGCTCTCTGTAGTTAAAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp GTATGTTCTGCTCACCGCGGGCACGGGCTCTCGCAATaGCCTCTGCTACAATCCGATTTGCTTTCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: VCSAHRGHGLSQ*PLLQSDLLSLA
Trigger: AGCAAGAGAAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTGCCCGCGGTGAGCAGAACATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp CTCGCATCTCATAGTCTTGTGGGGTTGGTCGGCTCCTaGCCACCACCTCGTGCTCTAGCTTTAAAGTCAGAC +
Preference number: 6 (lower is better)
Translates to: LASHSLVGLVGS*PPPRALALKSD
Trigger: GTCTGACTTTAAAGCTAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCCCACAAGACTATGAGATGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp TTCATCCTCATCGTCATCCTCCTCAGGTTGCAGTGGTaGCAACCGCAAGGTAGTACCAGAGGCGGTAGTCAC +
Preference number: 6 (lower is better)
Translates to: FILIVILLRLQW*QPQGSTRGGSH
Trigger: GTGACTACCGCCTCTGGTACTACCTTGCGGTTGCCACCACTGCAACCTGAGGAGGATGACGATGAGGATGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp CAGGTTGGGCTGGCTGCTCCTGGCTGGCAGGCTGAGTaGTATAATCATGCAAGGTTATGGATTCTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: QVGLAAPGWQAE*YNHARLWILEL
Trigger: CAGCTCCAGAATCCATAACCTTGCATGATTATACCACTCAGCCTGCCAGCCAGGAGCAGCCAGCCCAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp GGTAGGATGCAGCAGACACTGATAAGGCAGCTCCCCTaGCTTGTGTTTGGGGCGCTCCGCTGTTTATTCTGT +
Preference number: 6 (lower is better)
Translates to: GRMQQTLIRQLP*LVFGALRCLFC
Trigger: ACAGAATAAACAGCGGAGCGCCCCAAACACAAGCCAGGGGAGCTGCCTTATCAGTGTCTGCTGCATCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556833.1
CDS CAA 72 bp GTCAGGGCTGCCAGCTGGTTGCCCTGTAACACTATCTaGCCTGGTAGACTCCCTAGCACAACATGCCGATGT +
Preference number: 6 (lower is better)
Translates to: VRAASWLPCNTI*PGRLPSTTCRC
Trigger: ACATCGGCATGTTGTGCTAGGGAGTCTACCAGGCAAGATAGTGTTACAGGGCAACCAGCTGGCAGCCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000430710.8
ENST00000553283.1
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 90 bp CACCGCGGGCACGGGCTCTCGCAATGGCCTCTGCTACAATCCGATTaGCTTTCTCTTGCTTCTTCTGGTGTTCCAATCTGCGGTTTTCCT +
Preference number: 6 (lower is better)
Translates to: HRGHGLSQWPLLQSD*LSLASSGVPICGFP
Trigger: AGGAAAACCGCAGATTGGAACACCAGAAGAAGCAAGAGAAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTGCCCGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp TGCGTTTCTTCTCGCCTTCCTCCTCTGGCCGAACGCTaGGCAACTCGTCCTCATTTAAGACTCGAGGTATGT +
Preference number: 6 (lower is better)
Translates to: CVSSRLPPLAER*ATRPHLRLEVC
Trigger: ACATACCTCGAGTCTTAAATGAGGACGAGTTGCCCAGCGTTCGGCCAGAGGAGGAAGGCGAGAAGAAACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp CCCATAGGCATGATGACGGTCATGTCTGCGGGAGCGTaGCCGCTCATCATCCTCACTTTCCAAATCAGAGAA +
Preference number: 6 (lower is better)
Translates to: PIGMMTVMSAGA*PLIILTFQIRE
Trigger: TTCTCTGATTTGGAAAGTGAGGATGATGAGCGGCCACGCTCCCGCAGACATGACCGTCATCATGCCTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646558.1
ENST00000646647.2
CDS CCA 72 bp CTACGGCTAGAAGGCCACTTCCCTGAGAGTACAGCCTaGCAGACGAGGTCAATACGGTTTATCAGGACACGA +
Preference number: 6 (lower is better)
Translates to: LRLEGHFPESTA*QTRSIRFIRTR
Trigger: TCGTGTCCTGATAAACCGTATTGACCTCGTCTGCCAGGCTGTACTCTCAGGGAAGTGGCCTTCTAGCCGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp TTGCCTGGCCCCAAAATTCCTCCTGTTACCATTTCCTaGCTCCTACGGCTAGAAGGCCACTTCCCTGAGAGT +
Preference number: 6 (lower is better)
Translates to: LPGPKIPPVTIS*LLRLEGHFPES
Trigger: ACTCTCAGGGAAGTGGCCTTCTAGCCGTAGGAGCCAGGAAATGGTAACAGGAGGAATTTTGGGGCCAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp TTCCTCCTCTGCCATGGAAGCTGCACTACTACTTCGTaGTGTGGGGACTGGAGAGTCACCATATTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: FLLCHGSCTTTS*CGDWRVTIFSR
Trigger: CCTGGAGAATATGGTGACTCTCCAGTCCCCACACCACGAAGTAGTAGTGCAGCTTCCATGGCAGAGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CAA 72 bp TCCAGCTCAGAGTCCGAATCATCCTCATCCTCCAGTTaGACTGGTGGAACACTCCGGGAAACCAGAGGGGTA +
Preference number: 6 (lower is better)
Translates to: SSSESESSSSSS*TGGTLRETRGV
Trigger: TACCCCTCTGGTTTCCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGGATGATTCGGACTCTGAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CAA 72 bp TGGGAGCTGTTTCCTCTGGTGGAGGGACCAGTTCACTaGCTGATGAATTCCCCACATCACCACCTCCACCAT +
Preference number: 6 (lower is better)
Translates to: WELFPLVEGPVH*LMNSPHHHLHH
Trigger: ATGGTGGAGGTGGTGATGTGGGGAATTCATCAGCAAGTGAACTGGTCCCTCCACCAGAGGAAACAGCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 72 bp GACAGCTGTGGCAGAGACACCCATGAAAGGATTCCCTaGGCTCAGGATCTCCTGGCTCTTGGAGACTTGCAA +
Preference number: 6 (lower is better)
Translates to: DSCGRDTHERIP*AQDLLALGDLQ
Trigger: TTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCATGGGTGTCTCTGCCACAGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS TCA 72 bp TACGCTAGAAATCGGGGATCAACAGCAAACTCTGGATaGCCCTGTAACCACATCTCCAGTTCAGCCCGGCGA +
Preference number: 6 (lower is better)
Translates to: YARNRGSTANSG*PCNHISSSARR
Trigger: TCGCCGGGCTGAACTGGAGATGTGGTTACAGGGTCATCCAGAGTTTGCTGTTGATCCCCGATTTCTAGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 72 bp TTCATACGGGCAGCCAGAAAAGAGAAGTCTGGGTCCTaGATGATGTTGCAGTCTGTTTGGCTCACCCCATGG +
Preference number: 6 (lower is better)
Translates to: FIRAARKEKSGS*MMLQSVWLTPW
Trigger: CCATGGGGTGAGCCAAACAGACTGCAACATCATGCAGGACCCAGACTTCTCTTTTCTGGCTGCCCGTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp GTGTTATGCAGAGATAGAGACCCAGTGCTTCCACCCTaGATGAGGGCCATCATCTTAGAAAGGTCTGGTCGC +
Preference number: 6 (lower is better)
Translates to: VLCRDRDPVLPP*MRAIILERSGR
Trigger: GCGACCAGACCTTTCTAAGATGATGGCCCTCATGCAGGGTGGAAGCACTGGGTCTCTATCTCTGCATAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 72 bp GACTGTAGGCCACTACTGCTGTGTTGGAACGTGTTATaGAGAGATAGAGACCCAGTGCTTCCACCCTGCATG +
Preference number: 6 (lower is better)
Translates to: DCRPLLLCWNVL*RDRDPVLPPCM
Trigger: CATGCAGGGTGGAAGCACTGGGTCTCTATCTCTGCATAACACGTTCCAACACAGCAGTAGTGGCCTACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 72 bp AGAGTTGCTTCTGTTGGCATCCATCCTCACCCACTCTaGAATCTTGCTTACCATCTCCAGCTGCTGGGGGAA +
Preference number: 6 (lower is better)
Translates to: RVASVGIHPHPL*NLAYHLQLLGE
Trigger: TTCCCCCAGCAGCTGGAGATGGTAAGCAAGATTGCAGAGTGGGTGAGGATGGATGCCAACAGAAGCAACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555301.1
CDS CCA 72 bp CACAAAGAACTGCATGGAAGGCAAAGTCTCGCCATCTaGTTCTTGCACTGGTTCAGGGAGGATAGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: HKELHGRQSLAI*FLHWFREDRLR
Trigger: CCTGAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTGCCTTCCATGCAGTTCTTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000642914.1
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp CTCAGAGTCCGAATCATCCTCATCCTCCAGTTTGACTaGTGGAACACTCCGGGAAACCAGAGGGGTAGTATC +
Preference number: 6 (lower is better)
Translates to: LRVRIILILQFD*WNTPGNQRGSI
Trigger: GATACTACCCCTCTGGTTTCCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGGATGATTCGGACTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp AGTCCAAGGGCTTCCTCAATGGGGTCTTGTGTGACCTaGTTAAAGCTGTCATCAGTCAGAGAGTCCAGGCCA +
Preference number: 6 (lower is better)
Translates to: SPRASSMGSCVT*LKLSSVRESRP
Trigger: TGGCCTGGACTCTCTGACTGATGACAGCTTTAACCAGGTCACACAAGACCCCATTGAGGAAGCCCTTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 72 bp ACTGTAAACTCCTTTTCATCCATGCCTCGGCGAAGTTaGGTGAACTGGGCTGCCGCTGTGCTGACTGCAGAT +
Preference number: 6 (lower is better)
Translates to: TVNSFSSMPRRS*VNWAAAVLTAD
Trigger: ATCTGCAGTCAGCACAGCGGCAGCCCAGTTCACCAAACTTCGCCGAGGCATGGATGAAAAGGAGTTTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CAA 72 bp TCTCCTGGCTCTTGGAGACTTGCAAAAGTCCTGATGTaGGCGTCGATGTCTGTAAGACAGGTTGGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: SPGSWRLAKVLM*ASMSVRQVGLA
Trigger: AGCCAGCCCAACCTGTCTTACAGACATCGACGCCAACATCAGGACTTTTGCAAGTCTCCAAGAGCCAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 90 bp TTGCTCAAGTCCAGCTCAGAGTCCGAATCATCCTCATCCTCCAGTTaGACTGGTGGAACACTCCGGGAAACCAGAGGGGTAGTATCAGAG +
Preference number: 6 (lower is better)
Translates to: LLKSSSESESSSSSS*TGGTLRETRGVVSE
Trigger: CTCTGATACTACCCCTCTGGTTTCCCGGAGTGTTCCACCAGTCAAACTGGAGGATGAGGATGATTCGGACTCTGAGCTGGACTTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CAA 90 bp GAGACACCCATGAAAGGATTCCCTTGGCTCAGGATCTCCTGGCTCTaGGAGACTTGCAAAAGTCCTGATGTTGGCGTCGATGTCTGTAAG +
Preference number: 6 (lower is better)
Translates to: ETPMKGFPWLRISWL*ETCKSPDVGVDVCK
Trigger: CTTACAGACATCGACGCCAACATCAGGACTTTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCATGGGTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp ACGGGCTCTCGCAATGGCCTCTGCTACAATCCGATTTaGTTTCTCTTGCTTCTTCTGGTGTTCCAATCTGCG +
Preference number: 6 (lower is better)
Translates to: TGSRNGLCYNPI*FLLLLLVFQSA
Trigger: CGCAGATTGGAACACCAGAAGAAGCAAGAGAAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp GGTGATGCGTTTCGATTCACCCTTCATGGAGCAAGATaGCTACGTCTTCAGAGGAAGATGGTGGAACTCCTG +
Preference number: 6 (lower is better)
Translates to: GDAFRFTLHGAR*LRLQRKMVELL
Trigger: CAGGAGTTCCACCATCTTCCTCTGAAGACGTAGCCATCTTGCTCCATGAAGGGTGAATCGAAACGCATCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430710.8
ENST00000642518.1
ENST00000645929.1
CDS CCA 72 bp CTCAATGGGGTCTTGTGTGACCTTCATGGAGCAAGATaGCTACGTCTTCAGAGGAAGATGGTGGAACTCCTG +
Preference number: 6 (lower is better)
Translates to: LNGVLCDLHGAR*LRLQRKMVELL
Trigger: CAGGAGTTCCACCATCTTCCTCTGAAGACGTAGCCATCTTGCTCCATGAAGGTCACACAAGACCCCATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553622.5
CDS CAA 72 bp CACGGGCTCTCGCAATGGCCTCTGCTACAATCCGATTaGCTTTCTCTTGCTTCTTCTGGTGTTCCAATCTGC +
Preference number: 6 (lower is better)
Translates to: HGLSQWPLLQSD*LSLASSGVPIC
Trigger: GCAGATTGGAACACCAGAAGAAGCAAGAGAAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 90 bp ACGGGCTCTCGCAATGGCCTCTGCTACAATCCGATTTGCTTTCTCTaGCTTCTTCTGGTGTTCCAATCTGCGGTTTTCCTCCATTCCTGT +
Preference number: 6 (lower is better)
Translates to: TGSRNGLCYNPICFL*LLLVFQSAVFLHSC
Trigger: ACAGGAATGGAGGAAAACCGCAGATTGGAACACCAGAAGAAGCAAGAGAAAGCAAATCGGATTGTAGCAGAGGCCATTGCGAGAGCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 90 bp CTCCACAAAGAACTGCATGGAAGGCAAAGTCTCGCCATCTGGTTCTaGCACTGGTTCAGGGAGGATAGGCTCAGGTTTTATTGGACCAGT +
Preference number: 6 (lower is better)
Translates to: LHKELHGRQSLAIWF*HWFREDRLRFYWTS
Trigger: ACTGGTCCAATAAAACCTGAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTGCCTTCCATGCAGTTCTTTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000642914.1
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 90 bp TCACCATATTCTCCAGGAGTCAATGAGGGACTGTCTAGCAAGTGGTaGCCTGGCCCCAAAATTCCTCCTGTTACCATTTCCTGGCTCCTA +
Preference number: 6 (lower is better)
Translates to: SPYSPGVNEGLSSKW*PGPKIPPVTISWLL
Trigger: TAGGAGCCAGGAAATGGTAACAGGAGGAATTTTGGGGCCAGGCAACCACTTGCTAGACAGTCCCTCATTGACTCCTGGAGAATATGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS TCA 72 bp GTGATGAAGCATGGTGCTGGAGTCTACATGAGGGGATaGTGGTGCACCACCCATCACAAATGGCATAAAAGG +
Preference number: 6 (lower is better)
Translates to: VMKHGAGVYMRG*WCTTHHKWHKR
Trigger: CCTTTTATGCCATTTGTGATGGGTGGTGCACCATCATCCCCTCATGTAGACTCCAGCACCATGCTTCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS TCA 72 bp TGTGTCAGGTACCATTGGGAGATGATAAACCAGGGCTaGAAGCGCCTAAGGCTCTTCCACAGAAGCAACGTA +
Preference number: 6 (lower is better)
Translates to: CVRYHWEMINQG*KRLRLFHRSNV
Trigger: TACGTTGCTTCTGTGGAAGAGCCTTAGGCGCTTTCAGCCCTGGTTTATCATCTCCCAATGGTACCTGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS GCA 72 bp TTCACGCCTTGTCCATCGTTGTTGTTTCTCCCGCCGTaGAATTTCTTTCAGCTTGAAGGCTGCTTCACAACG +
Preference number: 6 (lower is better)
Translates to: FTPCPSLLFLPP*NFFQLEGCFTT
Trigger: CGTTGTGAAGCAGCCTTCAAGCTGAAAGAAATTGCACGGCGGGAGAAACAACAACGATGGACAAGGCGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp AGTCGAGCAAAAGTGCGGAAGCGATCCCAATGGAACTaGATGGTGTCAGGGTCATATTCCACACCAAACGTA +
Preference number: 6 (lower is better)
Translates to: SRAKVRKRSQWN*MVSGSYSTPNV
Trigger: TACGTTTGGTGTGGAATATGACCCTGACACCATGCAGTTCCATTGGGATCGCTTCCGCACTTTTGCTCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557329.1
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp CCAATTCATCCCTCCTTAGGCAACCTGGTGGTCCCTTaGTCCTGGGAGGTCACCATATTGATGTCAAACTTA +
Preference number: 6 (lower is better)
Translates to: PIHPSLGNLVVP*SWEVTILMSNL
Trigger: TAAGTTTGACATCAATATGGTGACCTCCCAGGAGCAAGGGACCACCAGGTTGCCTAAGGAGGGATGAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS GCA 72 bp CTCAGTCCGCACCCCAAATTAGGTTGGTTGAGTCAATaGATCCATTGTCCCCAAGGAGAATCATCCGGAAAG +
Preference number: 6 (lower is better)
Translates to: LSPHPKLGWLSQ*IHCPQGESSGK
Trigger: CTTTCCGGATGATTCTCCTTGGGGACAATGGATGCATTGACTCAACCAACCTAATTTGGGGTGCGGACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS CCA 72 bp TTGTCTAGTCGAGCAAAAGTGCGGAAGCGATCCCAATaGAACTGCATGGTGTCAGGGTCATATTCCACACCA +
Preference number: 6 (lower is better)
Translates to: LSSRAKVRKRSQ*NCMVSGSYSTP
Trigger: TGGTGTGGAATATGACCCTGACACCATGCAGTTCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557329.1
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 72 bp GATTCCAGTAATGTTGCCATCCCGACCACTCATGGATaGAAGCACAGCCTTATCCAACCCCAACTTGAGGCT +
Preference number: 6 (lower is better)
Translates to: DSSNVAIPTTHG*KHSLIQPQLEA
Trigger: AGCCTCAAGTTGGGGTTGGATAAGGCTGTGCTTCAATCCATGAGTGGTCGGGATGGCAACATTACTGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000555962.6
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 72 bp ATGAAAGGATTCCCTTGGCTCAGGATCTCCTGGCTCTaGGAGACTTGCAAAAGTCCTGATGTTGGCGTCGAT +
Preference number: 6 (lower is better)
Translates to: MKGFPWLRISWL*ETCKSPDVGVD
Trigger: ATCGACGCCAACATCAGGACTTTTGCAAGTCTCCAAGAGCCAGGAGATCCTGAGCCAAGGGAATCCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS TCA 72 bp CTGCGGACGATTCACCCTTTTGAGTTCTGGGTGCCTTaGCTGAATCCGTTTAAATTCTCGAATCTTGCCCTC +
Preference number: 6 (lower is better)
Translates to: LRTIHPFEFWVP*LNPFKFSNLAL
Trigger: GAGGGCAAGATTCGAGAATTTAAACGGATTCAGTCAAGGCACCCAGAACTCAAAAGGGTGAATCGTCCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000554384.1
ENST00000557364.6
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS TCA 72 bp CCAGGCCAAATAAATTTGGGTCATCGAACAGATCCATaGTGGGGTCTGCCATCTTGGGAAAGTAATGGAGGG +
Preference number: 6 (lower is better)
Translates to: PGQINLGHRTDP*WGLPSWESNGG
Trigger: CCCTCCATTACTTTCCCAAGATGGCAGACCCCATCATGGATCTGTTCGATGACCCAAATTTATTTGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000646063.1
ENST00000646647.2
CDS TCA 72 bp GCCTCACTGTCCCACCAAGTTGTTGGAACCTCCAGTTaGTCCACTACTGGGAACCATATGTCAATCTCACTA +
Preference number: 6 (lower is better)
Translates to: ASLSHQVVGTSS*STTGNHMSISL
Trigger: TAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS GCA 72 bp AACTGCATGGAAGGCAAAGTCTCGCCATCTGGTTCTTaGACTGGTTCAGGGAGGATAGGCTCAGGTTTTATT +
Preference number: 6 (lower is better)
Translates to: NCMEGKVSPSGS*TGSGRIGSGFI
Trigger: AATAAAACCTGAGCCTATCCTCCCTGAACCAGTGCAAGAACCAGATGGCGAGACTTTGCCTTCCATGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000642914.1
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp GGCTTTCATCTGTCTTTTTGTCTAGTCGAGCAAAAGTaGGGAAGCGATCCCAATGGAACTGCATGGTGTCAG +
Preference number: 6 (lower is better)
Translates to: GFHLSFCLVEQK*GSDPNGTAWCQ
Trigger: CTGACACCATGCAGTTCCATTGGGATCGCTTCCGCACTTTTGCTCGACTAGACAAAAAGACAGATGAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557329.1
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp TGTGACCCAAAGATGACACAGACTGTAGGCCACTACTaGTGTGTTGGAACGTGTTATGCAGAGATAGAGACC +
Preference number: 6 (lower is better)
Translates to: CDPKMTQTVGHY*CVGTCYAEIET
Trigger: GGTCTCTATCTCTGCATAACACGTTCCAACACAGCAGTAGTGGCCTACAGTCTGTGTCATCTTTGGGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 72 bp AGAGAAAGCTCTCATGTGCTCACTCTCTCAAAGAGTTaGTGGGCCCTCTATGAAACCAAAATTCACCTCCCC +
Preference number: 6 (lower is better)
Translates to: RESSHVLTLSKS*WALYETKIHLP
Trigger: GGGGAGGTGAATTTTGGTTTCATAGAGGGCCCAGCAACTCTTTGAGAGAGTGAGCACATGAGAGCTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS CCA 72 bp CATCTTCTTCACTGGGATTCTCCACAAAGAACTGCATaGAAGGCAAAGTCTCGCCATCTGGTTCTTGCACTG +
Preference number: 6 (lower is better)
Translates to: HLLHWDSPQRTA*KAKSRHLVLAL
Trigger: CAGTGCAAGAACCAGATGGCGAGACTTTGCCTTCCATGCAGTTCTTTGTGGAGAATCCCAGTGAAGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000642914.1
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp ATTGTGGACAGTGGGGCAATGACCAAGAAGGGACCATaGATGCCCACATTATATACTTCCTGCAAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: IVDSGAMTKKGP*MPTLYTSCKKA
Trigger: TGCCTTCTTGCAGGAAGTATATAATGTGGGCATCCATGGTCCCTTCTTGGTCATTGCCCCACTGTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000430710.8
ENST00000554384.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp CAGAAGCTCAGGGGTCATTTGTTCTCCATCTTCATTTaGGAATCCATCTTGGGACATAGTGAGGGACAGGAG +
Preference number: 6 (lower is better)
Translates to: QKLRGHLFSIFI*ESILGHSEGQE
Trigger: CTCCTGTCCCTCACTATGTCCCAAGATGGATTCCCAAATGAAGATGGAGAACAAATGACCCCTGAGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp TATTCTCCAGGAGTCAATGAGGGACTGTCTAGCAAGTaGTTGCCTGGCCCCAAAATTCCTCCTGTTACCATT +
Preference number: 6 (lower is better)
Translates to: YSPGVNEGLSSK*LPGPKIPPVTI
Trigger: AATGGTAACAGGAGGAATTTTGGGGCCAGGCAACCACTTGCTAGACAGTCCCTCATTGACTCCTGGAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp GGCTGGCAGGCTGAGTGGTATAATCATGCAAGGTTATaGATTCTGGAGCTGGAGCTGTGGATTCTTTGGAAA +
Preference number: 6 (lower is better)
Translates to: GWQAEWYNHARL*ILELELWILWK
Trigger: TTTCCAAAGAATCCACAGCTCCAGCTCCAGAATCCATAACCTTGCATGATTATACCACTCAGCCTGCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp GAAAGCTCTCATGTGCTCACTCTCTCAAAGAGTTGCTaGGCCCTCTATGAAACCAAAATTCACCTCCCCCTT +
Preference number: 6 (lower is better)
Translates to: ESSHVLTLSKSC*ALYETKIHLPL
Trigger: AAGGGGGAGGTGAATTTTGGTTTCATAGAGGGCCCAGCAACTCTTTGAGAGAGTGAGCACATGAGAGCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS CCA 72 bp ACCATATTGATGTCAAACTTAGTGCAGACACCTGATTaGCATAGCACACCACAGCCCAGAACTCCTAGGCTC +
Preference number: 6 (lower is better)
Translates to: TILMSNLVQTPD*HSTPQPRTPRL
Trigger: GAGCCTAGGAGTTCTGGGCTGTGGTGTGCTATGCCAATCAGGTGTCTGCACTAAGTTTGACATCAATATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS CCA 72 bp ACTGAGAAAAACCTGTCCACTAGTGGCAAGAAGCTCTaGGAAATCAAAACTGGATTCTCAGGCTGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: TEKNLSTSGKKL*EIKTGFSGCRV
Trigger: CACCCTGCAGCCTGAGAATCCAGTTTTGATTTCCCAGAGCTTCTTGCCACTAGTGGACAGGTTTTTCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS CCA 72 bp CGGGTTAATATTAAGATAGAGAAAAGCCAGGCGCAGTaGTGCACAATGGTAGTCCCAGATACTCAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: RVNIKIEKSQAQ*CTMVVPDTQEA
Trigger: AGCCTCCTGAGTATCTGGGACTACCATTGTGCACCACTGCGCCTGGCTTTTCTCTATCTTAATATTAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS CCA 72 bp TTTAGTACAGACGGGGTTTCACCTTATTTGCCATGCTaGTCTCGAACTGATGACCTTGTGATCCACCCACTG +
Preference number: 6 (lower is better)
Translates to: FSTDGVSPYLPC*SRTDDLVIHPL
Trigger: CAGTGGGTGGATCACAAGGTCATCAGTTCGAGACCAGCATGGCAAATAAGGTGAAACCCCGTCTGTACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CAA 72 bp CGCAATGGCCTCTGCTACAATCCGATTTGCTTTCTCTaGCTTCTTCTGGTGTTCCAATCTGCGGTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: RNGLCYNPICFL*LLLVFQSAVFL
Trigger: GAGGAAAACCGCAGATTGGAACACCAGAAGAAGCAAGAGAAAGCAAATCGGATTGTAGCAGAGGCCATTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000430710.8
ENST00000553651.2
ENST00000557364.6
ENST00000642518.1
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000645929.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 90 bp CCTCAGTCCGCACCCCAAATTAGGTTGGTTGAGTCAATGCATCCATaGTCCCCAAGGAGAATCATCCGGAAAGTAAACACAGGTACTACA +
Preference number: 6 (lower is better)
Translates to: PQSAPQIRLVESMHP*SPRRIIRKVNTGTT
Trigger: TGTAGTACCTGTGTTTACTTTCCGGATGATTCTCCTTGGGGACAATGGATGCATTGACTCAACCAACCTAATTTGGGGTGCGGACTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645140.1
CDS CAA 90 bp CGACTTGTCAGCCTCACTGTCCCACCAAGTTGTTGGAACCTCCAGTaGATCCACTACTGGGAACCATATGTCAATCTCACTAAAGGTATA +
Preference number: 6 (lower is better)
Translates to: RLVSLTVPPSCWNLQ*IHYWEPYVNLTKGI
Trigger: TATACCTTTAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGGGACAGTGAGGCTGACAAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CCA 72 bp CATATAATTCATACGGGCAGCCAGAAAAGAGAAGTCTaGGTCCTGCATGATGTTGCAGTCTGTTTGGCTCAC +
Preference number: 6 (lower is better)
Translates to: HIIHTGSQKREV*VLHDVAVCLAH
Trigger: GTGAGCCAAACAGACTGCAACATCATGCAGGACCCAGACTTCTCTTTTCTGGCTGCCCGTATGAATTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp AAAGATGACACAGACTGTAGGCCACTACTGCTGTGTTaGAACGTGTTATGCAGAGATAGAGACCCAGTGCTT +
Preference number: 6 (lower is better)
Translates to: KDDTDCRPLLLC*NVLCRDRDPVL
Trigger: AAGCACTGGGTCTCTATCTCTGCATAACACGTTCCAACACAGCAGTAGTGGCCTACAGTCTGTGTCATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000557727.1
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS CCA 72 bp AGGTCCATACAGCAGAGGCGGAAGATTTCTGGTAACTaGAGACCCCAAAATGGAAATGAGGTACATGCACTT +
Preference number: 6 (lower is better)
Translates to: RSIQQRRKISGN*RPQNGNEVHAL
Trigger: AAGTGCATGTACCTCATTTCCATTTTGGGGTCTCCAGTTACCAGAAATCTTCCGCCTCTGCTGTATGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553283.1
CDS CAA 72 bp CCTGTGAGTAGCACCTTGTGTTCCAGGTCCATGTGCTaGAGACTATCAAGCAGCTTGCAATTACGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: PVSSTLCSRSMC*RLSSSLQLRFF
Trigger: GAAAAACCGTAATTGCAAGCTGCTTGATAGTCTCAAGCACATGGACCTGGAACACAAGGTGCTACTCACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 90 bp ATCTATCAGGATGGAGATGCACTATGCACTACCTCTAATGGTAAGTaGGGGTCTTACCCATATACCAGGAGATGCTTTTCCACCCGAAAG +
Preference number: 6 (lower is better)
Translates to: IYQDGDALCTTSNGK*GSYPYTRRCFSTRK
Trigger: CTTTCGGGTGGAAAAGCATCTCCTGGTATATGGGTAAGACCCCAACTTACCATTAGAGGTAGTGCATAGTGCATCTCCATCCTGATAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS TCA 72 bp ACATCTCGTTCAGTCATACGTCGCTTGAAGCGTCCATaGGATAAAATATCTCGCCATCGTCCCCAACCATAT +
Preference number: 6 (lower is better)
Translates to: TSRSVIRRLKRP*DKISRHRPQPY
Trigger: ATATGGTTGGGGACGATGGCGAGATATTTTATCTCATGGACGCTTCAAGCGACGTATGACTGAACGAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS TCA 72 bp AAATGGTCTCCACATCTCGTTCAGTCATACGTCGCTTaGAGCGTCCATGAGATAAAATATCTCGCCATCGTC +
Preference number: 6 (lower is better)
Translates to: KWSPHLVQSYVA*SVHEIKYLAIV
Trigger: GACGATGGCGAGATATTTTATCTCATGGACGCTTCAAGCGACGTATGACTGAACGAGATGTGGAGACCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646558.1
ENST00000646647.2
CDS TCA 72 bp CCACACCAGATGACTTCAGCATATGCTAACCTAGGCTaGGAATCCTTGACTGAGTCGACAAACTCAGAAAAG +
Preference number: 6 (lower is better)
Translates to: PHQMTSAYANLG*ESLTESTNSEK
Trigger: CTTTTCTGAGTTTGTCGACTCAGTCAAGGATTCTCAGCCTAGGTTAGCATATGCTGAAGTCATCTGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556833.1
CDS TCA 72 bp ACAGTGATTAGAGAACAGATGGGAGGCTCCCTACCTTaGGATTTACCTATCCATCTGGCCCTTCTTGAACAT +
Preference number: 6 (lower is better)
Translates to: TVIREQMGGSLP*DLPIHLALLEH
Trigger: ATGTTCAAGAAGGGCCAGATGGATAGGTAAATCTCAAGGTAGGGAGCCTCCCATCTGTTCTCTAATCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CCA 72 bp AATCATGCAAGGTTATGGATTCTGGAGCTGGAGCTGTaGATTCTTTGGAAAGTTCTGTGGGAGCTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: NHARLWILELEL*ILWKVLWELFP
Trigger: AGGAAACAGCTCCCACAGAACTTTCCAAAGAATCCACAGCTCCAGCTCCAGAATCCATAACCTTGCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 72 bp CACACCAAACGTAGACACCACTCGATAAAAATCAGTTaGTTCACGCCTTGTCCATCGTTGTTGTTTCTCCCG +
Preference number: 6 (lower is better)
Translates to: HTKRRHHSIKIS*FTPCPSLLFLP
Trigger: CGGGAGAAACAACAACGATGGACAAGGCGTGAACAAACTGATTTTTATCGAGTGGTGTCTACGTTTGGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 72 bp CCATGGAAGTACTTGGTAAGGCTTTCATCTGTCTTTTaGTCTAGTCGAGCAAAAGTGCGGAAGCGATCCCAA +
Preference number: 6 (lower is better)
Translates to: PWKYLVRLSSVF*SSRAKVRKRSQ
Trigger: TTGGGATCGCTTCCGCACTTTTGCTCGACTAGACAAAAAGACAGATGAAAGCCTTACCAAGTACTTCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000430710.8
ENST00000555301.1
ENST00000555935.2
ENST00000557329.1
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CAA 72 bp GATGGAGATGCACTATGCACTACCTCTAATGGTAAGTaGGGGTCTTACCCATATACCAGGAGATGCTTTTCC +
Preference number: 6 (lower is better)
Translates to: DGDALCTTSNGK*GSYPYTRRCFS
Trigger: GGAAAAGCATCTCCTGGTATATGGGTAAGACCCCAACTTACCATTAGAGGTAGTGCATAGTGCATCTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CAA 72 bp TCGTGTTTACAGGAATGGCAGGCCAGGTGCAAAACTTaGGGTCAGTCTGGTATAGCATCCAATGGAATACAA +
Preference number: 6 (lower is better)
Translates to: SCLQEWQARCKT*GQSGIASNGIQ
Trigger: TTGTATTCCATTGGATGCTATACCAGACTGACCCAAAGTTTTGCACCTGGCCTGCCATTCCTGTAAACACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CAA 90 bp GACATGTTTTCAGGCAAAATAAGTACCTTTATGTGTCAGGTACCATaGGGAGATGATAAACCAGGGCTGAAAGCGCCTAAGGCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: DMFSGKISTFMCQVP*GDDKPGLKAPKALP
Trigger: TGGAAGAGCCTTAGGCGCTTTCAGCCCTGGTTTATCATCTCCCAATGGTACCTGACACATAAAGGTACTTATTTTGCCTGAAAACATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS TCA 72 bp TCCTTTGAGGGTCCTACACTAGGCAAACTGAGGGTGTaGTCGTCAAAGAGAAATTTCTCAGTCATGATGGAA +
Preference number: 6 (lower is better)
Translates to: SFEGPTLGKLRV*SSKRNFSVMME
Trigger: TTCCATCATGACTGAGAAATTTCTCTTTGACGATCACACCCTCAGTTTGCCTAGTGTAGGACCCTCAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS GCA 72 bp TCTGGGAAATCAAAACTGGATTCTCAGGCTGCAGGGTaGAATATAATTCACACTAGAAGCAACCCGTTAGTG +
Preference number: 6 (lower is better)
Translates to: SGKSKLDSQAAG*NIIHTRSNPLV
Trigger: CACTAACGGGTTGCTTCTAGTGTGAATTATATTGCACCCTGCAGCCTGAGAATCCAGTTTTGATTTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS GCA 72 bp CAAACCAAGAGTATCTATCAGGATGGAGATGCACTATaGACTACCTCTAATGGTAAGTTGGGGTCTTACCCA +
Preference number: 6 (lower is better)
Translates to: QTKSIYQDGDAL*TTSNGKLGSYP
Trigger: TGGGTAAGACCCCAACTTACCATTAGAGGTAGTGCATAGTGCATCTCCATCCTGATAGATACTCTTGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS GCA 72 bp CTGATTCATGGGACCCTAACTTACCATAGCATACAGTaGGGTAACACACTGCTAACAGTGATTAGAGAACAG +
Preference number: 6 (lower is better)
Translates to: LIHGTLTYHSIQ*GNTLLTVIREQ
Trigger: CTGTTCTCTAATCACTGTTAGCAGTGTGTTACCGCACTGTATGCTATGGTAAGTTAGGGTCCCATGAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CCA 72 bp AGACTCATCCAATATCCTATCCACCTCTACGTAGTCTaGATTAAAGGGCTCTTCATCCTCATGGAAGAAGTG +
Preference number: 6 (lower is better)
Translates to: RLIQYPIHLYVV*IKGLFILMEEV
Trigger: CACTTCTTCCATGAGGATGAAGAGCCCTTTAATCCAGACTACGTAGAGGTGGATAGGATATTGGATGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp AGGCTGAGTGGTATAATCATGCAAGGTTATGGATTCTaGAGCTGGAGCTGTGGATTCTTTGGAAAGTTCTGT +
Preference number: 6 (lower is better)
Translates to: RLSGIIMQGYGF*SWSCGFFGKFC
Trigger: ACAGAACTTTCCAAAGAATCCACAGCTCCAGCTCCAGAATCCATAACCTTGCATGATTATACCACTCAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000553622.5
ENST00000553651.2
ENST00000557364.6
ENST00000643048.1
ENST00000643469.1
ENST00000645140.1
ENST00000646063.1
ENST00000646340.1
ENST00000646647.2
CDS CCA 72 bp AATTATTGTGAACTCTTGCTTAATATCTGTCTTTCCTaGCAGACGGTGAGCTCTGTAAGGACAGGGACTGTG +
Preference number: 6 (lower is better)
Translates to: NYCELLLNICLS*QTVSSVRTGTV
Trigger: CACAGTCCCTGTCCTTACAGAGCTCACCGTCTGCCAGGAAAGACAGATATTAAGCAAGAGTTCACAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS CCA 72 bp ATGGAGATGCACTATGCACTACCTCTAATGGTAAGTTaGGGTCTTACCCATATACCAGGAGATGCTTTTCCA +
Preference number: 6 (lower is better)
Translates to: MEMHYALPLMVS*GLTHIPGDAFP
Trigger: TGGAAAAGCATCTCCTGGTATATGGGTAAGACCCCAACTTACCATTAGAGGTAGTGCATAGTGCATCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CAA 72 bp GGATGTCCATCTCCCATTACTCCATTCGCCATCAACTaGTGCTTCTGGAATGTTAACTTCAATCCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: GCPSPITPFAIN*CFWNVNFNPSS
Trigger: TGAGGAAGGATTGAAGTTAACATTCCAGAAGCACAAGTTGATGGCGAATGGAGTAATGGGAGATGGACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS TCA 72 bp TGTTGGGTCACCTGGGCTGTGGAAAACAAAGTAGAATaGATAGGAAGTATAGCAAGGGTAGTAGAGGCAATA +
Preference number: 6 (lower is better)
Translates to: CWVTWAVENKVE*IGSIARVVEAI
Trigger: TATTGCCTCTACTACCCTTGCTATACTTCCTATTCATTCTACTTTGTTTTCCACAGCCCAGGTGACCCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS GCA 72 bp TGTCCATCTCCCATTACTCCATTCGCCATCAACTTGTaGTTCTGGAATGTTAACTTCAATCCTTCCTCATCT +
Preference number: 6 (lower is better)
Translates to: CPSPITPFAINL*FWNVNFNPSSS
Trigger: AGATGAGGAAGGATTGAAGTTAACATTCCAGAAGCACAAGTTGATGGCGAATGGAGTAATGGGAGATGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000553870.2
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646647.2
CDS GCA 72 bp CTACTAAATTCTTTTGGGATCCTTTTACCTGAATGCTaGTTTCTTCATCTTCTCGAGGTGACTGTGCAGGCA +
Preference number: 6 (lower is better)
Translates to: LLNSFGILLPEC*FLHLLEVTVQA
Trigger: TGCCTGCACAGTCACCTCGAGAAGATGAAGAAAGCAGCATTCAGGTAAAAGGATCCCAAAAGAATTTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553651.2
ENST00000643048.1
CDS GCA 72 bp GAAGAATCAGCCAAGGCTGACAACCCCAGTAATTTGTaGTTCTGTGAAAGAAATGACAGGCAATACCTATTC +
Preference number: 6 (lower is better)
Translates to: EESAKADNPSNL*FCERNDRQYLF
Trigger: GAATAGGTATTGCCTGTCATTTCTTTCACAGAAGCACAAATTACTGGGGTTGTCAGCCTTGGCTGATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS CCA 72 bp AATTCCACCAGGTCATCATCTTTCAGAGTGCTAAAGTaGCGCGTTTGTTTTCGTACTCTAGGTGTGTCAATT +
Preference number: 6 (lower is better)
Translates to: NSTRSSSFRVLK*RVCFRTLGVSI
Trigger: AATTGACACACCTAGAGTACGAAAACAAACGCGCCACTTTAGCACTCTGAAAGATGATGACCTGGTGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646558.1
ENST00000646647.2
CDS CCA 72 bp CAAATGAGAATTCCTTACCTCATCATCTTGGTCCTTTaGGGGACCTTGGAGTGGTTTATATTCAGGATCTTC +
Preference number: 6 (lower is better)
Translates to: QMRIPYLIILVL*GTLEWFIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGTAAGGAATTCTCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS CCA 72 bp CCACCAAGTTGTTGGAACCTCCAGTTGATCCACTACTaGGAACCATATGTCAATCTCACTAAAGGTATAAGA +
Preference number: 6 (lower is better)
Translates to: PPSCWNLQLIHY*EPYVNLTKGIR
Trigger: TCTTATACCTTTAGTGAGATTGACATATGGTTCCCAGTAGTGGATCAACTGGAGGTTCCAACAACTTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CAA 72 bp AGTGAGACTCAAATGAGAATTCCTTACCTCATCATCTaGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTC +
Preference number: 6 (lower is better)
Translates to: SETQMRIPYLII*VLWGTLEWFIF
Trigger: GAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGTAAGGAATTCTCATTTGAGTCTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS CAA 72 bp CGCCGCAAATATAACAGGCATATTTCTTCACTCATCTaGCTCCAGTGTTTAGGGGTAAACCTGGATATTGGA +
Preference number: 6 (lower is better)
Translates to: RRKYNRHISSLI*LQCLGVNLDIG
Trigger: TCCAATATCCAGGTTTACCCCTAAACACTGGAGCAAGATGAGTGAAGAAATATGCCTGTTATATTTGCGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS CCA 72 bp TTCCTTACCTCATCATCTTGGTCCTTTGGGGGACCTTaGAGTGGTTTATATTCAGGATCTTCACAATCTTTA +
Preference number: 6 (lower is better)
Translates to: FLTSSSWSFGGP*SGLYSGSSQSL
Trigger: TAAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGTAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS CAA 72 bp CAGGTCATCATCTTTCAGAGTGCTAAAGTGGCGCGTTaGTTTTCGTACTCTAGGTGTGTCAATTACCAAATT +
Preference number: 6 (lower is better)
Translates to: QVIIFQSAKVAR*FSYSRCVNYQI
Trigger: AATTTGGTAATTGACACACCTAGAGTACGAAAACAAACGCGCCACTTTAGCACTCTGAAAGATGATGACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646558.1
ENST00000646647.2
CDS CAA 72 bp ATTCCTTACCTCATCATCTTGGTCCTTTGGGGGACCTaGGAGTGGTTTATATTCAGGATCTTCACAATCTTT +
Preference number: 6 (lower is better)
Translates to: IPYLIILVLWGT*EWFIFRIFTIF
Trigger: AAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGTAAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS CAA 72 bp TCAAATGAGAATTCCTTACCTCATCATCTTGGTCCTTaGGGGGACCTTGGAGTGGTTTATATTCAGGATCTT +
Preference number: 6 (lower is better)
Translates to: SNENSLPHHLGP*GDLGVVYIQDL
Trigger: AAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGTAAGGAATTCTCATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS CAA 90 bp GAATTCCACCAGGTCATCATCTTTCAGAGTGCTAAAGTGGCGCGTTaGTTTTCGTACTCTAGGTGTGTCAATTACCAAATTATTCTTGCT +
Preference number: 6 (lower is better)
Translates to: EFHQVIIFQSAKVAR*FSYSRCVNYQIILA
Trigger: AGCAAGAATAATTTGGTAATTGACACACCTAGAGTACGAAAACAAACGCGCCACTTTAGCACTCTGAAAGATGATGACCTGGTGGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646558.1
ENST00000646647.2
CDS CAA 90 bp ATAGAGAAAAGTGAGACTCAAATGAGAATTCCTTACCTCATCATCTaGGTCCTTTGGGGGACCTTGGAGTGGTTTATATTCAGGATCTTC +
Preference number: 6 (lower is better)
Translates to: IEKSETQMRIPYLII*VLWGTLEWFIFRIF
Trigger: GAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGTAAGGAATTCTCATTTGAGTCTCACTTTTCTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS CAA 90 bp CCTTCATCTCTTTCACTTGTCCATCCATTCCACTTTTTCTTCTACTaGCAACATACAACCAAAACTACTCTTATCAAGGATGAACGCCGC +
Preference number: 6 (lower is better)
Translates to: PSSLSLVHPFHFFFY*QHTTKTTLIKDERR
Trigger: GCGGCGTTCATCCTTGATAAGAGTAGTTTTGGTTGTATGTTGCAAGTAGAAGAAAAAGTGGAATGGATGGACAAGTGAAAGAGATGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS CCA 72 bp TACCTCATCATCTTGGTCCTTTGGGGGACCTTGGAGTaGTTTATATTCAGGATCTTCACAATCTTTATCAAA +
Preference number: 6 (lower is better)
Translates to: YLIILVLWGTLE*FIFRIFTIFIK
Trigger: TTTGATAAAGATTGTGAAGATCCTGAATATAAACCACTCCAAGGTCCCCCAAAGGACCAAGATGATGAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645206.1
CDS GCA 72 bp ATAGGAGTAGTTCTTGTACTTGACAAAGAATTCTTCTaGTTCAGTATATTGTCCAGAAGGGAGCTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: IGVVLVLDKEFF*FSILSRRELLL
Trigger: AAGAAGGAGCTCCCTTCTGGACAATATACTGAAGCAGAAGAATTCTTTGTCAAGTACAAGAACTACTCCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430710.8
ENST00000557364.6
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp ACTCTAATTTGTATACAAACCACCTGGTATGGGATGTaGTTGAAAGCCCACATTTTTAAAAAGCACCCAAGT +
Preference number: 6 (lower is better)
Translates to: TLICIQTTWYGM*LKAHIFKKHPS
Trigger: ACTTGGGTGCTTTTTAAAAATGTGGGCTTTCAAGCACATCCCATACCAGGTGGTTTGTATACAAATTAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS CCA 72 bp GGAAAGAGAGGACACTCAATTATGACAAGAATTATGTaGCAAGCCATCACTTTTCTGTCAACACTGCTTAAA +
Preference number: 6 (lower is better)
Translates to: GKRGHSIMTRIM*QAITFLSTLLK
Trigger: TTTAAGCAGTGTTGACAGAAAAGTGATGGCTTGCCACATAATTCTTGTCATAATTGAGTGTCCTCTCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS CAA 90 bp CAAGGGTTTAAACACATGCTATTTCCATTCCTTCATCTCTTTCACTaGTCCATCCATTCCACTTTTTCTTCTACTTGCAACATACAACCA +
Preference number: 6 (lower is better)
Translates to: QGFKHMLFPFLHLFH*SIHSTFSSTCNIQP
Trigger: TGGTTGTATGTTGCAAGTAGAAGAAAAAGTGGAATGGATGGACAAGTGAAAGAGATGAAGGAATGGAAATAGCATGTGTTTAAACCCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS TCA 72 bp TACCAATTAAAGAGCAGCCAATTAACCCCTTCCAACTaGTATTCCCGTAGCTGGTTTCTGTTTTTATATTCA +
Preference number: 6 (lower is better)
Translates to: YQLKSSQLTPSN*YSRSWFLFLYS
Trigger: TGAATATAAAAACAGAAACCAGCTACGGGAATATCAGTTGGAAGGGGTTAATTGGCTGCTCTTTAATTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000430710.8
ENST00000554384.1
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645140.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646647.2
CDS GCA 72 bp CACTACAGTAATACAAAATCAGGACAAATATATGAATaGAGAGTCACAGCTTTTAAAGGTAACTCCCAGCAC +
Preference number: 6 (lower is better)
Translates to: HYSNTKSGQIYE*RVTAFKGNSQH
Trigger: GTGCTGGGAGTTACCTTTAAAAGCTGTGACTCTGCATTCATATATTTGTCCTGATTTTGTATTACTGTAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553651.2
CDS GCA 72 bp CAACTACACCTTAGCAATATATCTGACATCCAAAGGTaGTCATTAAATAAAGCCTGTGAACATAGCATTACG +
Preference number: 6 (lower is better)
Translates to: QLHLSNISDIQR*SLNKACEHSIT
Trigger: CGTAATGCTATGTTCACAGGCTTTATTTAATGAGCACCTTTGGATGTCAGATATATTGCTAAGGTGTAGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS GCA 72 bp CACGTACTAGTTCTTGTACTTGACAAAGAATTCTTCTaGTTCAGTATATTGTCCAGAAGGGAGCTAAGAAAA +
Preference number: 6 (lower is better)
Translates to: HVLVLVLDKEFF*FSILSRRELRK
Trigger: TTTTCTTAGCTCCCTTCTGGACAATATACTGAAGCAGAAGAATTCTTTGTCAAGTACAAGAACTAGTACGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS CCA 72 bp ATGATTCTGCAATTCTTTTGTCTTGCCATTTTCAGCTaGGCTAATCAAGTCCCAGATGAAGCCTTTAATATT +
Preference number: 6 (lower is better)
Translates to: MILQFFCLAIFS*ANQVPDEAFNI
Trigger: AATATTAAAGGCTTCATCTGGGACTTGATTAGCCCAGCTGAAAATGGCAAGACAAAAGAATTGCAGAATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000430710.8
ENST00000555935.2
ENST00000557364.6
ENST00000643469.1
ENST00000645206.1
ENST00000645929.1
ENST00000646340.1
ENST00000646558.1
ENST00000646647.2
CDS CAA 72 bp CTAATTTGTATACAAACCACCTGGTATGGGATGTGCTaGAAAGCCCACATTTTTAAAAAGCACCCAAGTAAT +
Preference number: 6 (lower is better)
Translates to: LICIQTTWYGMC*KAHIFKKHPSN
Trigger: ATTACTTGGGTGCTTTTTAAAAATGTGGGCTTTCAAGCACATCCCATACCAGGTGGTTTGTATACAAATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642914.1
CDS CAA 90 bp TATTTAATTTCGTGTTTACAGGAATGGCAGGCCAGGTGCAAAACTTaGGGTCAGTCTGGTATAGCATCCAATGGAATACAAATAATTATA +
Preference number: 6 (lower is better)
Translates to: YLISCLQEWQARCKT*GQSGIASNGIQIII
Trigger: TATAATTATTTGTATTCCATTGGATGCTATACCAGACTGACCCAAAGTTTTGCACCTGGCCTGCCATTCCTGTAAACACGAAATTAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CAA 90 bp TTATTGAAGATCAATCAGATAACTGAGTTATTTCTCAGGAGCATTTaGCTAAATGTTCCATCCGTGAACATAAATCTTCAGTCGGAAAGG +
Preference number: 6 (lower is better)
Translates to: LLKINQITELFLRSI*LNVPSVNINLQSER
Trigger: CCTTTCCGACTGAAGATTTATGTTCACGGATGGAACATTTAGCAAAATGCTCCTGAGAAATAACTCAGTTATCTGATTGATCTTCAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646558.1
CDS CAA 72 bp CTTTCACTTGTCCATCCATTCCACTTTTTCTTCTACTaGCAACATACAACCAAAACTACTCTTATCAAGGAT +
Preference number: 6 (lower is better)
Translates to: LSLVHPFHFFFY*QHTTKTTLIKD
Trigger: ATCCTTGATAAGAGTAGTTTTGGTTGTATGTTGCAAGTAGAAGAAAAAGTGGAATGGATGGACAAGTGAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642914.1