RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000116254

Ensembl transcript IDs: ENST00000262450.8, ENST00000377999.5, ENST00000462991.5, ENST00000475121.1, ENST00000491020.1, ENST00000496404.1

Found 1169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGCCTGGCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTaGCTGGGACTCCTGGCGCGCCTTGCACCCAGCCCAGGGCCCTCC +
Preference number: 1 (lower is better)
Translates to: GAWLPKLDPPPPGPP*LGLLARLAPSPGPS
Trigger: GGAGGGCCCTGGGCTGGGTGCAAGGCGCGCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGCCAGGCTCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp CCTGGCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTaGGACTCCTGGCGCGCCTTGCACCCAGCCCAGGGCCCTCCCTTT +
Preference number: 1 (lower is better)
Translates to: PGFQSWTRPRRGHPG*DSWRALHPAQGPPF
Trigger: AAAGGGAGGGCCCTGGGCTGGGTGCAAGGCGCGCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGCCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp GCAGGGGGCCCAGGCCCAAAGGAGCCCTGGCCAGGCTTTCCTGGGTaGCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCTGGCGAGGC +
Preference number: 1 (lower is better)
Translates to: AGGPGPKEPWPGFPG*PSLTRQRRREPWRG
Trigger: GCCTCGCCAGGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCAGGGCTCCTTTGGGCCTGGGCCCCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp CAGTGCAGGGGGCCCAGGCCCAAAGGAGCCCTGGCCAGGCTTTCCTaGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCTGGCG +
Preference number: 1 (lower is better)
Translates to: QCRGPRPKGALARLS*VPESNQAEEKGALA
Trigger: CGCCAGGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCAGGGCTCCTTTGGGCCTGGGCCCCCTGCACTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp TGGGATGACAGGAGTGAGGGCTGCAGGTGTCACCGGGCCAAGGCTTaGTCAGCTCCTGACCTCGGCAGGGGAGCACCCGGGGGACTCTGG +
Preference number: 1 (lower is better)
Translates to: WDDRSEGCRCHRAKA*SAPDLGRGAPGGLW
Trigger: CCAGAGTCCCCCGGGTGCTCCCCTGCCGAGGTCAGGAGCTGACCAAGCCTTGGCCCGGTGACACCTGCAGCCCTCACTCCTGTCATCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp GATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCCTTGGTaGTGCGGCTGGGAGGGGTCTGCAGAGGGCACTGGGTCCAGTCCC +
Preference number: 1 (lower is better)
Translates to: DVRALLAGNKAASPW*CGWEGSAEGTGSSP
Trigger: GGGACTGGACCCAGTGCCCTCTGCAGACCCCTCCCAGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp GCCCTGACCGCCACAGGCCTCCAGTCCTGCTGCTCGGGACCTATCTaGTGTGGGCCAAGGAAGGTGGGCACTGCTCCCAACGAGGGCCAA +
Preference number: 1 (lower is better)
Translates to: ALTATGLQSCCSGPI*CGPRKVGTAPNEGQ
Trigger: TTGGCCCTCGTTGGGAGCAGTGCCCACCTTCCTTGGCCCACAGCAGATAGGTCCCGAGCAGCAGGACTGGAGGCCTGTGGCGGTCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp CGGGCGAGAAGCGGGGGCAGGGGCTTGTCCCTGTCACTCTTCAGCTaGCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTCTCT +
Preference number: 1 (lower is better)
Translates to: RARSGGRGLSLSLFS*LRDCRRPLCPSGLS
Trigger: AGAGAGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGACAAGCCCCTGCCCCCGCTTCTCGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
3UTR GCA 90 bp AGGAAACAAGGCAGCAAGCCCTTGGTGCTGCGGCTGGGAGGGGTCTaGAGAGGGCACTGGGTCCAGTCCCCCTCCAGGCAGAACTCTCCC +
Preference number: 1 (lower is better)
Translates to: RKQGSKPLVLRLGGV*RGHWVQSPSRQNSP
Trigger: GGGAGAGTTCTGCCTGGAGGGGGACTGGACCCAGTGCCCTCTGCAGACCCCTCCCAGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp GAGACACAGACCCCTGCCCTGACCGCCACAGGCCTCCAGTCCTGCTaGTCGGGACCTATCTGCTGTGGGCCAAGGAAGGTGGGCACTGCT +
Preference number: 1 (lower is better)
Translates to: ETQTPALTATGLQSC*SGPICCGPRKVGTA
Trigger: AGCAGTGCCCACCTTCCTTGGCCCACAGCAGATAGGTCCCGAGCAGCAGGACTGGAGGCCTGTGGCGGTCAGGGCAGGGGTCTGTGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp GTGGAGACACAGACCCCTGCCCTGACCGCCACAGGCCTCCAGTCCTaGTGCTCGGGACCTATCTGCTGTGGGCCAAGGAAGGTGGGCACT +
Preference number: 1 (lower is better)
Translates to: VETQTPALTATGLQS*CSGPICCGPRKVGT
Trigger: AGTGCCCACCTTCCTTGGCCCACAGCAGATAGGTCCCGAGCAGCAGGACTGGAGGCCTGTGGCGGTCAGGGCAGGGGTCTGTGTCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp GGCCAGGGTCTCCTGGGCCAGCTCAGGGCCCATGACCCTCCTTGCTaGGGCGCAGCTATCACTGCCCTTAACCACACCTCTGGCAGAAGG +
Preference number: 1 (lower is better)
Translates to: GQGLLGQLRAHDPPC*GAAITALNHTSGRR
Trigger: CCTTCTGCCAGAGGTGTGGTTAAGGGCAGTGATAGCTGCGCCCCAGCAAGGAGGGTCATGGGCCCTGAGCTGGCCCAGGAGACCCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp TGGGATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCCTTaGTGCTGCGGCTGGGAGGGGTCTGCAGAGGGCACTGGGTCCAGT +
Preference number: 1 (lower is better)
Translates to: WDVRALLAGNKAASP*CCGWEGSAEGTGSS
Trigger: ACTGGACCCAGTGCCCTCTGCAGACCCCTCCCAGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACATCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp CCAGGGTGCTCCCCACTACGCCCACGTGCAGTGTCAGGGTCGGGCTaGCCTTGCAGACCTGGATCCAGACTGGAGTGTGGGAATGCGCCA +
Preference number: 1 (lower is better)
Translates to: PGCSPLRPRAVSGSG*PCRPGSRLECGNAP
Trigger: TGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAAGGCCAGCCCGACCCTGACACTGCACGTGGGCGTAGTGGGGAGCACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR TCA 90 bp ACCCCAGTGCTTGCCACTGCTTGTTTGGGGACGAGGGCACGGGAGTaGGCTTCTGACCCGAGCCAGGACCCTTTGCCAGGAGGCACCGCA +
Preference number: 1 (lower is better)
Translates to: TPVLATACLGTRARE*ASDPSQDPLPGGTA
Trigger: TGCGGTGCCTCCTGGCAAAGGGTCCTGGCTCGGGTCAGAAGCTCACTCCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp GGGCCAAGGAAGGTGGGCACTGCTCCCAACGAGGGCCAACCCCAGTaGTTGCCACTGCTTGTTTGGGGACGAGGGCACGGGAGTGAGCTT +
Preference number: 1 (lower is better)
Translates to: GPRKVGTAPNEGQPQ*LPLLVWGRGHGSEL
Trigger: AAGCTCACTCCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTTGGGAGCAGTGCCCACCTTCCTTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp ACCTTCTTCCTAACTAGTGACATGACCCCGATGCGGGTCAGCACGTaGTGCCTGGAGAGGCCCTCCCGGGGCACGCCGTCTGCGAAGGTC +
Preference number: 1 (lower is better)
Translates to: TFFLTSDMTPMRVST*CLERPSRGTPSAKV
Trigger: GACCTTCGCAGACGGCGTGCCCCGGGAGGGCCTCTCCAGGCAGCACGTGCTGACCCGCATCGGGGTCATGTCACTAGTTAGGAAGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR GCA 90 bp TCTGGCCGCTCCTCTCGGGCTCTCTCCTTGCTGGCTGGGCTCTCGTaGTTGTCCTCACTCTCCACTCTATCCAAGGCGGCTGGAAGGGCC +
Preference number: 1 (lower is better)
Translates to: SGRSSRALSLLAGLS*LSSLSTLSKAAGRA
Trigger: GGCCCTTCCAGCCGCCTTGGATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR CCA 90 bp ACTGCTCCCAACGAGGGCCAACCCCAGTGCTTGCCACTGCTTGTTTaGGGACGAGGGCACGGGAGTGAGCTTCTGACCCGAGCCAGGACC +
Preference number: 1 (lower is better)
Translates to: TAPNEGQPQCLPLLV*GRGHGSELLTRART
Trigger: GGTCCTGGCTCGGGTCAGAAGCTCACTCCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTTGGGAGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp TCCAGTCCTGCTGCTCGGGACCTATCTGCTGTGGGCCAAGGAAGGTaGGCACTGCTCCCAACGAGGGCCAACCCCAGTGCTTGCCACTGC +
Preference number: 1 (lower is better)
Translates to: SSPAARDLSAVGQGR*ALLPTRANPSACHC
Trigger: GCAGTGGCAAGCACTGGGGTTGGCCCTCGTTGGGAGCAGTGCCCACCTTCCTTGGCCCACAGCAGATAGGTCCCGAGCAGCAGGACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp ACCCGAGCCCACTCTCCACTCCACCTCCTTGGGCCTCAAGTGTCCTaGGATGACAGGAGTGAGGGCTGCAGGTGTCACCGGGCCAAGGCT +
Preference number: 1 (lower is better)
Translates to: TRAHSPLHLLGPQVS*DDRSEGCRCHRAKA
Trigger: AGCCTTGGCCCGGTGACACCTGCAGCCCTCACTCCTGTCATCCCAGGACACTTGAGGCCCAAGGAGGTGGAGTGGAGAGTGGGCTCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp CTCCGTCTCCTCTGGCCGCTCCTCTCGGGCTCTCTCCTTGCTGGCTaGGCTCTCGTGCTTGTCCTCACTCTCCACTCTATCCAAGGCGGC +
Preference number: 1 (lower is better)
Translates to: LRLLWPLLSGSLLAG*ALVLVLTLHSIQGG
Trigger: GCCGCCTTGGATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAGGAGACGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR GCA 90 bp TGCTCCCCACTACGCCCACGTGCAGTGTCAGGGTCGGGCTGGCCTTaGAGACCTGGATCCAGACTGGAGTGTGGGAATGCGCCAAGAGGA +
Preference number: 1 (lower is better)
Translates to: CSPLRPRAVSGSGWP*RPGSRLECGNAPRG
Trigger: TCCTCTTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAAGGCCAGCCCGACCCTGACACTGCACGTGGGCGTAGTGGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp TTGAAGAGTTCCTCCGTGCCGAACTTGAGGATGTCGTCCAGCTCCTaGTTGGTCATGGACCCCGACTTGGAGCCGAGGCCGGGCCGCACC +
Preference number: 1 (lower is better)
Translates to: LKSSSVPNLRMSSSS*LVMDPDLEPRPGRT
Trigger: GGTGCGGCCCGGCCTCGGCTCCAAGTCGGGGTCCATGACCAAGCAGGAGCTGGACGACATCCTCAAGTTCGGCACGGAGGAACTCTTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR GCA 90 bp TTCTTCCTAACTAGTGACATGACCCCGATGCGGGTCAGCACGTGCTaGCTGGAGAGGCCCTCCCGGGGCACGCCGTCTGCGAAGGTCTCT +
Preference number: 1 (lower is better)
Translates to: FFLTSDMTPMRVSTC*LERPSRGTPSAKVS
Trigger: AGAGACCTTCGCAGACGGCGTGCCCCGGGAGGGCCTCTCCAGGCAGCACGTGCTGACCCGCATCGGGGTCATGTCACTAGTTAGGAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR CCA 90 bp AGTCCAGGGCCTTCAAGATGCGCTGGGCCGGGGACAGACACCTGCTaGCAGAGGATCCACCTCCCCACAAGGAGAGAGCAAACACCTGGC +
Preference number: 1 (lower is better)
Translates to: SPGPSRCAGPGTDTC*QRIHLPTRREQTPG
Trigger: GCCAGGTGTTTGCTCTCTCCTTGTGGGGAGGTGGATCCTCTGCCAGCAGGTGTCTGTCCCCGGCCCAGCGCATCTTGAAGGCCCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp GCTGACAATCATCTCCACTCCAGGGTGCTCCCCACTACGCCCACGTaGAGTGTCAGGGTCGGGCTGGCCTTGCAGACCTGGATCCAGACT +
Preference number: 1 (lower is better)
Translates to: ADNHLHSRVLPTTPT*SVRVGLALQTWIQT
Trigger: AGTCTGGATCCAGGTCTGCAAGGCCAGCCCGACCCTGACACTGCACGTGGGCGTAGTGGGGAGCACCCTGGAGTGGAGATGATTGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp CTGCTGCTCGGGACCTATCTGCTGTGGGCCAAGGAAGGTGGGCACTaGTCCCAACGAGGGCCAACCCCAGTGCTTGCCACTGCTTGTTTG +
Preference number: 1 (lower is better)
Translates to: LLLGTYLLWAKEGGH*SQRGPTPVLATACL
Trigger: CAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTTGGGAGCAGTGCCCACCTTCCTTGGCCCACAGCAGATAGGTCCCGAGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp GTGCAGTGTCAGGGTCGGGCTGGCCTTGCAGACCTGGATCCAGACTaGAGTGTGGGAATGCGCCAAGAGGAAGGACTTGTAGGTCCCGCC +
Preference number: 1 (lower is better)
Translates to: VQCQGRAGLADLDPD*SVGMRQEEGLVGPA
Trigger: GGCGGGACCTACAAGTCCTTCCTCTTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAAGGCCAGCCCGACCCTGACACTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp GGGCCCTGCAGACGTGCTCACTCCACCCCGAGTCACCTGAGCCCATaGGGCAATGCCTTCCAAGACCTTGGCTCAAACATGGCTCTGCAG +
Preference number: 1 (lower is better)
Translates to: GPCRRAHSTPSHLSP*GNAFQDLGSNMALQ
Trigger: CTGCAGAGCCATGTTTGAGCCAAGGTCTTGGAAGGCATTGCCCCATGGGCTCAGGTGACTCGGGGTGGAGTGAGCACGTCTGCAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp CCTTCTCCGTCTCCTCTGGCCGCTCCTCTCGGGCTCTCTCCTTGCTaGCTGGGCTCTCGTGCTTGTCCTCACTCTCCACTCTATCCAAGG +
Preference number: 1 (lower is better)
Translates to: PSPSPLAAPLGLSPC*LGSRACPHSPLYPR
Trigger: CCTTGGATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAGGAGACGGAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR TCA 90 bp CCCACAGACCCTGACGCACACTGGAGGCTCCAAGTGACCGACACTTaGCCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCCAC +
Preference number: 1 (lower is better)
Translates to: PTDPDAHWRLQVTDT*PSPSGFWLPCTRAH
Trigger: GTGGGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR TCA 90 bp GACCCTCCCTTCCTCTCCAGGGGTGCTTGGGCTCCAATCGCTGCTTaGGGAGTTCAGGACACACACACACACCCAACGGGCCCTTTCTGG +
Preference number: 1 (lower is better)
Translates to: DPPFLSRGAWAPIAA*GVQDTHTHPTGPFW
Trigger: CCAGAAAGGGCCCGTTGGGTGTGTGTGTGTGTCCTGAACTCCTCAAGCAGCGATTGGAGCCCAAGCACCCCTGGAGAGGAAGGGAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp TGGGGACCCTCCCTTCCTCTCCAGGGGTGCTTGGGCTCCAATCGCTaGTTGAGGAGTTCAGGACACACACACACACCCAACGGGCCCTTT +
Preference number: 1 (lower is better)
Translates to: WGPSLPLQGCLGSNR*LRSSGHTHTPNGPF
Trigger: AAAGGGCCCGTTGGGTGTGTGTGTGTGTCCTGAACTCCTCAAGCAGCGATTGGAGCCCAAGCACCCCTGGAGAGGAAGGGAGGGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR TCA 90 bp CCTGTCCCCTGCCCACAGACCCTGACGCACACTGGAGGCTCCAAGTaGCCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTA +
Preference number: 1 (lower is better)
Translates to: PVPCPQTLTHTGGSK*PTLDQVHLASGSHV
Trigger: TACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCAGGGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp ACAACCCACATGTGGGAAGATGGTTTTGGGATGTCAGGGCGCTCCTaGCAGGAAACAAGGCAGCAAGCCCTTGGTGCTGCGGCTGGGAGG +
Preference number: 1 (lower is better)
Translates to: TTHMWEDGFGMSGRS*QETRQQALGAAAGR
Trigger: CCTCCCAGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACATCCCAAAACCATCTTCCCACATGTGGGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp GGGAAGGTCCCAGTACAAGACTCAGAAACGCCTTCCAGGTCGACCTaGGGCCAGGAGAAGGATCACACACAAACAGGCCTAGGGAGGGCC +
Preference number: 1 (lower is better)
Translates to: GKVPVQDSETPSRST*GQEKDHTQTGLGRA
Trigger: GGCCCTCCCTAGGCCTGTTTGTGTGTGATCCTTCTCCTGGCCCCAGGTCGACCTGGAAGGCGTTTCTGAGTCTTGTACTGGGACCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp CGCACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTaGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACCT +
Preference number: 1 (lower is better)
Translates to: RTLEAPSDRHLTKSI*LLAPMYPSPLSTPP
Trigger: AGGTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR TCA 90 bp CACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTaGATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGC +
Preference number: 1 (lower is better)
Translates to: HVRRGCGGNAVWKNT*IMMRWHFWALAQLS
Trigger: GCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR TCA 90 bp GGACTTGTAGGTCCCGCCCTCCGGGGTTCAGAGACAGCCTCATTATaGGTGAGGCATATAGGGCTTAGGGAGGGCCAGGCAATCGCTCCA +
Preference number: 1 (lower is better)
Translates to: GLVGPALRGSETASL*VRHIGLREGQAIAP
Trigger: TGGAGCGATTGCCTGGCCCTCCCTAAGCCCTATATGCCTCACTCATAATGAGGCTGTCTCTGAACCCCGGAGGGCGGGACCTACAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp GTCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATaGTTTTGGGATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCA +
Preference number: 1 (lower is better)
Translates to: VRGSGWDSNNPHVGR*FWDVRALLAGNKAA
Trigger: TGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACATCCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp GGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTaGGATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCCT +
Preference number: 1 (lower is better)
Translates to: GSGWDSNNPHVGRWF*DVRALLAGNKAASP
Trigger: AGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACATCCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR TCA 90 bp ACCCTTTGCCAGGAGGCACCGCAGAGCACACAACACGCATGTGGATaGACCATAACATGTGAGCCCGCTGACAATCATCTCCACTCCAGG +
Preference number: 1 (lower is better)
Translates to: TLCQEAPQSTQHACG*TITCEPADNHLHSR
Trigger: CCTGGAGTGGAGATGATTGTCAGCGGGCTCACATGTTATGGTTCATCCACATGCGTGTTGTGTGCTCTGCGGTGCCTCCTGGCAAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR TCA 90 bp AATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTaGTTCTACCAGCAGCAAAAACCAAACCCAGCCCAAAGACGCCAA +
Preference number: 1 (lower is better)
Translates to: NRRLALWARVHARGP*FYQQQKPNPAQRRQ
Trigger: TTGGCGTCTTTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp CCTTTCCTAACATTCCCAGGATTCTGCACCCCAAGGCACCTTCCCTaGGAAGGTCCCAGTACAAGACTCAGAAACGCCTTCCAGGTCGAC +
Preference number: 1 (lower is better)
Translates to: PFLTFPGFCTPRHLP*EGPSTRLRNAFQVD
Trigger: GTCGACCTGGAAGGCGTTTCTGAGTCTTGTACTGGGACCTTCCCAGGGAAGGTGCCTTGGGGTGCAGAATCCTGGGAATGTTAGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp GCTGGAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATaGCCGAGGACCCTGATTCTACCAGCAGCAAAAACCAAACCCAGC +
Preference number: 1 (lower is better)
Translates to: AGNFQSQTGTLGSRS*PRTLILPAAKTKPS
Trigger: GCTGGGTTTGGTTTTTGCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp GCCCATGGGGCAATGCCTTCCAAGACCTTGGCTCAAACATGGCTCTaGAGAAGCCCTACTCAGCACTGGCTTAAAGTGGCTGGAAATTTC +
Preference number: 1 (lower is better)
Translates to: AHGAMPSKTLAQTWL*RSPTQHWLKVAGNF
Trigger: GAAATTTCCAGCCACTTTAAGCCAGTGCTGAGTAGGGCTTCTGCAGAGCCATGTTTGAGCCAAGGTCTTGGAAGGCATTGCCCCATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp CTCAAACATGGCTCTGCAGAAGCCCTACTCAGCACTGGCTTAAAGTaGCTGGAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTT +
Preference number: 1 (lower is better)
Translates to: LKHGSAEALLSTGLK*LEISNRRLALWARV
Trigger: AACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTCCAGCCACTTTAAGCCAGTGCTGAGTAGGGCTTCTGCAGAGCCATGTTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 90 bp AAGACCTTGGCTCAAACATGGCTCTGCAGAAGCCCTACTCAGCACTaGCTTAAAGTGGCTGGAAATTTCCAATCGCAGACTGGCACTTTG +
Preference number: 1 (lower is better)
Translates to: KTLAQTWLCRSPTQH*LKVAGNFQSQTGTL
Trigger: CAAAGTGCCAGTCTGCGATTGGAAATTTCCAGCCACTTTAAGCCAGTGCTGAGTAGGGCTTCTGCAGAGCCATGTTTGAGCCAAGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 90 bp CCAGGACTACCTTGGGTCTGGAACCCATCGGTAAAGAGACATCAGTaGTGCAGGTTCGAATCTTCCATACGTCATCCAACTTTTATCAAG +
Preference number: 1 (lower is better)
Translates to: PGLPWVWNPSVKRHQ*CRFESSIRHPTFIK
Trigger: CTTGATAAAAGTTGGATGACGTATGGAAGATTCGAACCTGCAGCACTGATGTCTCTTTACCGATGGGTTCCAGACCCAAGGTAGTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCTCCCGGGCCCCGGGGTaGTGGCCACGGACAGCACCA +
Preference number: 2 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGSRAPG*WPRTAP
Trigger: TGGTGCTGTCCGTGGCCAGCACCCCGGGGCCCGGGA...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR TCA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCCTCCCTCCACACCCCTaGACTCAGACCCCACGGGCC +
Preference number: 2 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGLPPHP*TQTPRA
Trigger: GGCCCGTGGGGTCTGAGTTCAGGGGTGTGGAGGGAG...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR TCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCCAGCCAGGCGGGCGTTaGGGGCCATGGCGGGGTGGT +
Preference number: 2 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLQPGGR*GPWRGG
Trigger: ACCACCCCGCCATGGCCCTCAACGCCCGCCTGGCTG...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp GCCCCCAGGGGCAGCCCGGTTCCACCTCCGGAGGTGGGCAGGGTAGGCATCCCACTTTTCTCTCCCATGTaGGTCGGGCAGGTGGCCCGG +
Preference number: 2 (lower is better)
Translates to: APRGSPVPPPEVGRVGIPLFSPM*VGQVAR
Trigger: CCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAG...TGGGATGCCTACCCTGCCCACCTCCGGAGGTGGAACCGGGCTGCCCCTGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGGAGCCCCAGCCCGTGTaGACCTCCACCCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: QPLSSLPWAKTRQATAHREPQPV*TSTPGP
Trigger: TGGGCCTGGGGTGGAGGTGCACACGGGCTGGGGCTC...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp GCCAAGGCTTGGTCAGCTCCTGACCTCGGCAGGGGAGCACCCGGGGGACTCTGGCGAGCCAGGACCCTTTaGCAGGAGGCACCGCAGAGC +
Preference number: 2 (lower is better)
Translates to: AKAWSAPDLGRGAPGGLWRARTL*QEAPQS
Trigger: GCTCTGCGGTGCCTCCTGGCAAAGGGTCCTGGCTCG...CCAGAGTCCCCCGGGTGCTCCCCTGCCGAGGTCAGGAGCTGACCAAGCCTTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCTTTCACGGGGGACGCTaGTTCTGCCTCAGGCGTGTA +
Preference number: 2 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGFHGGR*FCLRRV
Trigger: TACACGCCTGAGGCAGAAGCAGCGTCCCCCGTGAAA...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAATGTGGGTCGGGCAGGTaGCCCGGCAGGCGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: KGGEGARPAWLWGQRCVECGSGR*PGRRGS
Trigger: TGAGCCACGCCTGCCGGGCCACCTGCCCGACCCACA...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGTGTGGGTCGGGCAGGTaGCCCGGCAGGCGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQCGSGR*PGRRGS
Trigger: TGAGCCACGCCTGCCGGGCCACCTGCCCGACCCACA...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
3UTR-3UTR CCA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGCCTGGCTGGGACTCCTaGCGCGCCTTGCACCCAGCC +
Preference number: 2 (lower is better)
Translates to: QPLSSLPWAKTRQATAHRPGWDS*RALHPA
Trigger: GGCTGGGTGCAAGGCGCGCCAGGAGTCCCAGCCAGG...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 90 bp AGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTaGGGGGAGGGGCCGAGGCCAGGTCACCAAGACGGTGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: RNQLPRPRRALHRRD*GEGPRPGHQDGEGR
Trigger: TCTGCCCTCACCGTCTTGGTGACCTGGCCTCGGCCCCTCCCCCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAATCAGCACGTGCTGCCTaGAGAGGCCCTCCCGGGGCA +
Preference number: 2 (lower is better)
Translates to: KGGEGARPAWLWGQRCVESARAA*RGPPGA
Trigger: TGCCCCGGGAGGGCCTCTCCAGGCAGCACGTGCTGA...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR TCA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGTCAGGTAGGGGACACTaGGGGCTCCTAGGGCACCGG +
Preference number: 2 (lower is better)
Translates to: QPLSSLPWAKTRQATAHRSGRGH*GLLGHR
Trigger: CCGGTGCCCTAGGAGCCCTCAGTGTCCCCTACCTGA...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR TCA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCGCACCACCAGGTGGGTaGGCATCATCTTGCGCTTGG +
Preference number: 2 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCAPPGG*ASSCAW
Trigger: CCAAGCGCAAGATGATGCTCACCCACCTGGTGGTGC...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCATGAGGTGGCACTTCTaGGCTCTGGCCCAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCMRWHF*ALAQLS
Trigger: GCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCAT...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCCGTCCGGCGTGGTTGTaGGGGCAACGCTGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLRPAWL*GQRCVE
Trigger: TTCCACACAGCGTTGCCCCCACAACCACGCCGGACG...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGTCTCCGTCCCCAACTTaGAGGGGCAGGGTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWSPSPT*RGRVRG
Trigger: CCCCCGGACCCTGCCCCTCCAAGTTGGGGACGGAGA...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 90 bp TTGGGATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCCTaGGTGCTGCGGCTGGGAGGGGTCTGCAGAGGGCACTGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: LGCQGAPGRKQGSKP*VLRLGGVCRGHWVQ
Trigger: CTGGACCCAGTGCCCTCTGCAGACCCCTCCCAGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACATCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 90 bp GGCCGCTCCTCTCGGGCTCTCTCCTTGCTGGCTGGGCTCTCGTGCTaGTCCTCACTCTCCACTCTATCCAAGGCGGCTGGAAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GRSSRALSLLAGLSC*SSLSTLSKAAGRAW
Trigger: CCAGGCCCTTCCAGCCGCCTTGGATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR TCA 90 bp TGTCCCCTGCCCACAGACCCTGACGCACACTGGAGGCTCCAAGTGACCGACACTCCTCCCCAGCTGGGCTaGGTCCACAGGGCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: CPLPTDPDAHWRLQVTDTPPQLG*VHRAVP
Trigger: TGGCACTGCCCTGTGGACTCAGCCCAGCTGGGGAGG...AGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCAGGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR TCA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCTGGTGTCATCTGGCCTaGGTTCGGAACTGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCWCHLA*VRNCPL
Trigger: GAGGGGACAGTTCCGAACTCAGGCCAGATGACACCA...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR GCA 90 bp GCCAAGGCTTGGTCAGCTCCTGACCTCGGCAGGGGAGCACCCGGGGGACTCTGGGAGTCCACAGGGCAGTaGCAGGACTACCTTGGGTCT +
Preference number: 2 (lower is better)
Translates to: AKAWSAPDLGRGAPGGLWESTGQ*QDYLGS
Trigger: AGACCCAAGGTAGTCCTGGCACTGCCCTGTGGACTC...CCAGAGTCCCCCGGGTGCTCCCCTGCCGAGGTCAGGAGCTGACCAAGCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp GCCAAGGCTTGGTCAGCTCCTGACCTCGGCAGGGGAGCACCCGGGGGACTCTGGGCCAACCCCAGTGCTTaGCACTGCTTGTTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: AKAWSAPDLGRGAPGGLWANPSA*HCLFGD
Trigger: GTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGC...CCAGAGTCCCCCGGGTGCTCCCCTGCCGAGGTCAGGAGCTGACCAAGCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGCTGCGCTCCGACATCTaGAGCCGGGCGGCCACCGGG +
Preference number: 2 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWLRSDI*SRAATG
Trigger: CCCGGTGGCCGCCCGGCTGCAGATGTCGGAGCGCAG...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTGGGGCACGTCCGGCGTaGTTGTGGGGGCAACGCTGT +
Preference number: 2 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSGARPA*LWGQRC
Trigger: ACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAGAGAGAGCAAACACCTaGCGGCCTCCAGCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRERANT*RPPALA
Trigger: TGCCAAGGCTGGAGGCCGCCAGGTGTTTGCTCTCTC...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACCAGCCCACCCTCCCTaGGATCATACGCTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEPAHPP*DHTLLP
Trigger: AGGCAGAAGCGTATGATCCCAGGGAGGGTGGGCTGG...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGACATGACCCTCCTTGCTaGGGCGCAGCTATCACTGCC +
Preference number: 2 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRHDPPC*GAAITA
Trigger: GGCAGTGATAGCTGCGCCCCAGCAAGGAGGGTCATG...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCCCCCCTTTGGAGGACTaGACATCAGGGATGGGTGTG +
Preference number: 2 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCPPLED*TSGMGV
Trigger: CACACCCATCCCTGATGTCCAGTCCTCCAAAGGGGG...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCTCCGGTCCAGCAGCTTaGAGATGGCCGCATCGTCAT +
Preference number: 2 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCSGPAA*RWPHRH
Trigger: ATGACGATGCGGCCATCTCCAAGCTGCTGGACCGGA...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCTCATCCTGCCACTCCTaGTCCTCCTGGGAGGCATCG +
Preference number: 2 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLSSCHS*SSWEAS
Trigger: CGATGCCTCCCAGGAGGACCAGGAGTGGCAGGATGA...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR CAA 90 bp GTGCTCCCCACTACGCCCACGTGCAGTGTCAGGGTCGGGCTGGCCTaGCAGACCTGGATCCAGACTGGAGTGTGGGAATGCGCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: VLPTTPTCSVRVGLA*QTWIQTGVWECAKR
Trigger: CCTCTTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAAGGCCAGCCCGACCCTGACACTGCACGTGGGCGTAGTGGGGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 90 bp GGGGCCTTCTCCGTCTCCTCTGGCCGCTCCTCTCGGGCTCTCTCCTaGCTGGCTGGGCTCTCGTGCTTGTCCTCACTCTCCACTCTATCC +
Preference number: 2 (lower is better)
Translates to: GAFSVSSGRSSRALS*LAGLSCLSSLSTLS
Trigger: GGATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAGGAGACGGAGAAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR TCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGCCTCCGTGCCGAACTTaGGGATGTCGTCCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQPPCRT*GCRPAP
Trigger: AGGAGCTGGACGACATCCTCAAGTTCGGCACGGAGG...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR GCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGCCGGGGACAGACACCTaGTGGCAGAGGATCCACCTC +
Preference number: 2 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWPGTDT*WQRIHL
Trigger: GAGGTGGATCCTCTGCCAGCAGGTGTCTGTCCCCGG...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp TGTTGGCTACAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGCCCACTACGCCCACGTaGAGTGTCAGGGTCGGGCTG +
Preference number: 2 (lower is better)
Translates to: CWLQPLSSLPWAKTRQATPTTPT*SVRVGL
Trigger: CAGCCCGACCCTGACACTGCACGTGGGCGTAGTGGG...CGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTGTAGCCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCGAGGGCCAACCCCAGTaGTTGCCACTGCTTGTTTGG +
Preference number: 2 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLEGQPQ*LPLLVW
Trigger: CCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTC...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAGTCCCAAGGTGGCGCTaGCTCCTAAAAAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRVPRWR*LLKRWQ
Trigger: CTGCCACCTTTTTAGGAGCCAGCGCCACCTTGGGAC...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGATGAGGTGGCACTTCTaGGCTCTGGCCCAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: QPLSSLPWAKTRQATAHRMRWHF*ALAQLS
Trigger: GCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCAT...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGATGAGGTGGCACTTCTaGGCTCTGGCCCAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: RTARYLLDGGVPGAVGQAMRWHF*ALAQLS
Trigger: GCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCAT...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
3UTR-3UTR CCA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCGCCTTCAAGATGCGCTaGGCCGGGGACAGACACCTG +
Preference number: 2 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPAFKMR*AGDRHL
Trigger: CAGGTGTCTGTCCCCGGCCCAGCGCATCTTGAAGGC...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 90 bp CCAAGGAAGGTGGGCACTGCTCCCAACGAGGGCCAACCCCAGTGCTaGCCACTGCTTGTTTGGGGACGAGGGCACGGGAGTGAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: PRKVGTAPNEGQPQC*PLLVWGRGHGSELL
Trigger: CAGAAGCTCACTCCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTTGGGAGCAGTGCCCACCTTCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 90 bp ACCTCGATGTTGCCACCAACTCGGGCGAGAAGCGGGGGCAGGGGCTaGTCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCA +
Preference number: 2 (lower is better)
Translates to: TSMLPPTRARSGGRG*SLSLFSCLRDCRRP
Trigger: TGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGACAAGCCCCTGCCCCCGCTTCTCGCCCGAGTTGGTGGCAACATCGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR TCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGATGGCTCAGCTGGAAATaGGCGCTGCAACACAGGGAA +
Preference number: 2 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRWLSWK*ALQHRE
Trigger: TTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCA...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR TCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTGGCTCAGCTGGAAATaGGCGCTGCAACACAGGGAA +
Preference number: 2 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHWLSWK*ALQHRE
Trigger: TTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCA...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR TCA 90 bp CCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACACGAGGGCACGGGAGTaGGCTTCTGACCCGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PSPSGFWLPCTRAHSPLHTRARE*ASDPSQ
Trigger: CTGGCTCGGGTCAGAAGCTCACTCCCGTGCCCTCGT...GTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR TCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGCGTACTGCGCCACCTTaGAGGAGCTCAGGTACTCGT +
Preference number: 2 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQRTAPP*RSSGTR
Trigger: ACGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACG...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR TCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCGCATCTGGTTGTAGTTaGCAATCCCTCCCGGTCCAG +
Preference number: 2 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLASGCS*QSLPVQ
Trigger: CTGGACCGGGAGGGATTGTCAACTACAACCAGATGC...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
3UTR-3UTR GCA 90 bp GACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGCACCTGCCCTGTCTGGTaGTGGGAGGCTCCAAGCGGG +
Preference number: 2 (lower is better)
Translates to: DWHFGLAFMPEDPDSTSSTCPVW*WEAPSG
Trigger: CCCGCTTGGAGCCTCCCAGCACCAGACAGGGCAGGT...GCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGGCCCATGACCCTCCTTaGTGGGGCGCAGCTATCACT +
Preference number: 2 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWAHDPP*WGAAIT
Trigger: AGTGATAGCTGCGCCCCAGCAAGGAGGGTCATGGGC...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGAGGGAAAGTCCAGCCTaGCCCTGGGGGAAGCCAAGT +
Preference number: 2 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWRESPA*PWGKPS
Trigger: ACTTGGCTTCCCCCAGGGGCAGGCTGGACTTTCCCT...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAATGTCGTCCAGCTCCTaGTTGGTCATGGACCCCGAC +
Preference number: 2 (lower is better)
Translates to: KGGEGARPAWLWGQRCVEMSSSS*LVMDPD
Trigger: GTCGGGGTCCATGACCAAGCAGGAGCTGGACGACAT...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGTGGGTCGGGCAGGTaGCCCGGCAGGCGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: EISNRRLALWARVHARGPCGSGR*PGRRGS
Trigger: TGAGCCACGCCTGCCGGGCCACCTGCCCGACCCACA...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp TATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATGCTGTCCCAAGGTGGCGCTaGCTCCTAAAAAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: YLLDGGVPGAVGQAAQDAVPRWR*LLKRWQ
Trigger: CTGCCACCTTTTTAGGAGCCAGCGCCACCTTGGGAC...AGCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
3UTR-3UTR CCA 90 bp TGTTGGCTACAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGGGACAGACACCTGCTaGCAGAGGATCCACCTCCCC +
Preference number: 2 (lower is better)
Translates to: CWLQPLSSLPWAKTRQATGTDTC*QRIHLP
Trigger: GGGGAGGTGGATCCTCTGCCAGCAGGTGTCTGTCCC...CGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTGTAGCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCCTCAGGGATCAAGTCTaGGGTGCTGTACTTCCCGTT +
Preference number: 2 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCLRDQV*GAVLPV
Trigger: AACGGGAAGTACAGCACCCCAGACTTGATCCCTGAG...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR TCA 90 bp AGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATTGGTGTCATCTGGCCTaGGTTCGGAACTGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: RYLLDGGVPGAVGQAAQDWCHLA*VRNCPL
Trigger: GAGGGGACAGTTCCGAACTCAGGCCAGATGACACCA...ATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
3UTR-3UTR GCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGTGTCACCTGGCGGGGTaGTACCGTGCTTCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQCHLAG*YRASSL
Trigger: CAAAGAAGAAGCACGGTAGCACCCCGCCAGGTGACA...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR GCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTAGCTTGCGGATGCGCTTaGCCTTGCCCAGGTTGCGGG +
Preference number: 2 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLACGCA*PCPGCG
Trigger: CCCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGC...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR GCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGCCGGGGCACGCCGTCTaGGAAGGTCTCTGCACCATC +
Preference number: 2 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWPGHAV*EGLCTI
Trigger: GATGGTGCAGAGACCTTCGCAGACGGCGTGCCCCGG...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGCGTCCGGCGTGGTTGTaGGGGCAACGCTGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWRPAWL*GQRCVE
Trigger: TTCCACACAGCGTTGCCCCCACAACCACGCCGGACG...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR-3UTR CCA 90 bp CTCTCCTTGCTGGCTGGGCTCTCGTGCTTGTCCTCACTCTCCACTCTATCCAAGGGGGCACGTCCGGCGTaGTTGTGGGGGCAACGCTGT +
Preference number: 2 (lower is better)
Translates to: LSLLAGLSCLSSLSTLSKGARPA*LWGQRC
Trigger: ACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC...CTTGGATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp CCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGATGGTGGGGGCACGTCCGGCGTaGTTGTGGGGGCAACGCTGT +
Preference number: 2 (lower is better)
Translates to: PKLLLYIWEEPKAPCWMVGARPA*LWGQRC
Trigger: ACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC...CACCATCCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496404.1
3UTR-3UTR CCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCCCACATGTGGGAAGATaGTTTTGGGATGTCAGGGCG +
Preference number: 2 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLPHVGR*FWDVRA
Trigger: CGCCCTGACATCCCAAAACCATCTTCCCACATGTGG...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp TGTCCCCTGCCCACAGACCCTGACGCACACTGGAGGCTCCAAGTGACCGACACTCTGGCCAGGCTTTCCTaGGTGCCCGAGTCTAACCAG +
Preference number: 2 (lower is better)
Translates to: CPLPTDPDAHWRLQVTDTLARLS*VPESNQ
Trigger: CTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCAG...AGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCAGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 90 bp GGACCCTCCCTTCCTCTCCAGGGGTGCTTGGGCTCCAATCGCTGCTaGAGGAGTTCAGGACACACACACACACCCAACGGGCCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: GPSLPLQGCLGSNRC*RSSGHTHTPNGPFL
Trigger: CAGAAAGGGCCCGTTGGGTGTGTGTGTGTGTCCTGAACTCCTCAAGCAGCGATTGGAGCCCAAGCACCCCTGGAGAGGAAGGGAGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTTCATACGCTTCTGCCTaGTGTGAAGAGCCGGGGCCA +
Preference number: 2 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSSYASA*CEEPGP
Trigger: TGGCCCCGGCTCTTCACAGCAGGCAGAAGCGTATGA...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGTCCACGTTCTCCTCCTaGTTGATGATTTCCCGCTCC +
Preference number: 2 (lower is better)
Translates to: RTARYLLDGGVPGAVGQASTFSS*LMISRS
Trigger: GGAGCGGGAAATCATCAAGCAGGAGGAGAACGTGGA...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp TTGGCTTCTGTGCCCCGGGGTCTTTCTCATCCATGTAGCCCAGCTGGGCTTCCACGTCCGGCGTGGTTGTaGGGGCAACGCTGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: LASVPRGLSHPCSPAGLPRPAWL*GQRCVE
Trigger: TTCCACACAGCGTTGCCCCCACAACCACGCCGGACG...TGGAAGCCCAGCTGGGCTACATGGATGAGAAAGACCCCGGGGCACAGAAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp CCTCCAGGCAGAACTCTCCCCACGCCTTCCAAGAGTGCAGCCTCAGGCAAAAAGCATGTCCTCCCCAGCTaGGCTGAGTCCACAGGGCAG +
Preference number: 2 (lower is better)
Translates to: PPGRTLPTPSKSAASGKKHVLPS*AESTGQ
Trigger: CTGCCCTGTGGACTCAGCCCAGCTGGGGAGGACATG...CTTTTTGCCTGAGGCTGCACTCTTGGAAGGCGTGGGGAGAGTTCTGCCTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp TCCCAGTACAAGACTCAGAAACGCCTTCCAGGTCGACCTGGGGCCAGGAGAAGGCCAGGGACAGGGGAATaGGACAAGTCCAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SQYKTQKRLPGRPGARRRPGTGE*DKSRPP
Trigger: TGGGGGCCTGGACTTGTCCCATTCCCCTGTCCCTGG...CCTTCTCCTGGCCCCAGGTCGACCTGGAAGGCGTTTCTGAGTCTTGTACTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp CTCTCCTTGCTGGCTGGGCTCTCGTGCTTGTCCTCACTCTCCACTCTATCCAAGGCGGCTGGAAGGGCCTaGACTTCCAGGGGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: LSLLAGLSCLSSLSTLSKAAGRA*TSRGCL
Trigger: AAGGCAGCCCCTGGAAGTCCAGGCCCTTCCAGCCGC...CTTGGATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR TCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTCCTCCACGTCGTCCTTaGAGAGTTCCTCCGTGCCGA +
Preference number: 2 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGPPRRP*RVPPCR
Trigger: TCGGCACGGAGGAACTCTTCAAGGACGACGTGGAGG...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR GCA 90 bp GCCAAGGCTTGGTCAGCTCCTGACCTCGGCAGGGGAGCACCCGGGGGACTCTGGGTAAAGAGACATCAGTaGTGCAGGTTCGAATCTTCC +
Preference number: 2 (lower is better)
Translates to: AKAWSAPDLGRGAPGGLWVKRHQ*CRFESS
Trigger: GGAAGATTCGAACCTGCAGCACTGATGTCTCTTTAC...CCAGAGTCCCCCGGGTGCTCCCCTGCCGAGGTCAGGAGCTGACCAAGCCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTGCGGCTCCCCAAACCTaGCCTGTCTGGTGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLAAAPQT*PVWCWE
Trigger: CTCCCAGCACCAGACAGGGCAGGTTTGGGGAGCCGC...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGCATAGTGGATCACACTaGTGTCCTCCACGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQHSGSH*CPPRPC
Trigger: ACAAGGACGTGGAGGACAGCAGTGTGATCCACTATG...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR GCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTCTGCCACAGCGTGTaGAACTCCGTGAAGCCCCCG +
Preference number: 2 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWFCHSV*NSVKPP
Trigger: CGGGGGCTTCACGGAGTTGCACACGCTGTGGCAGAA...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR GCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTAGGGTGGTTGGGGTCCTaGGTCATGTTCAGGTACGCG +
Preference number: 2 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLGWLGS*VMFRYA
Trigger: CGCGTACCTGAACATGACGCAGGACCCCAACCACCC...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCTGGCTCCTAAAAAGGTaGCAGCTTTTCTCTCCCATG +
Preference number: 2 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLWLLKR*QLFSPM
Trigger: CATGGGAGAGAAAAGCTGCCACCTTTTTAGGAGCCA...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAATGGCTCCTAAAAAGGTaGCAGCTTTTCTCTCCCATG +
Preference number: 2 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEWLLKR*QLFSPM
Trigger: CATGGGAGAGAAAAGCTGCCACCTTTTTAGGAGCCA...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGATGAGGTGGCACTTCTaGGCTCTGGCCCAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWMRWHF*ALAQLS
Trigger: GCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCAT...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR-3UTR CCA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCATCCAGACTGGAGTGTaGGAATGCGCCAAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPIQTGV*ECAKRK
Trigger: CTTCCTCTTGGCGCATTCCCACACTCCAGTCTGGAT...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGGGGACCTATCTGCTGTaGGCCAAGGAAGGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWGTYLL*AKEGGH
Trigger: GTGCCCACCTTCCTTGGCCCACAGCAGATAGGTCCC...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 90 bp GCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTaGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: ARPAWLWGQRCVEEH*NYDEVALLGSGPAE
Trigger: CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR CAA 90 bp GGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTaGGGATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCC +
Preference number: 2 (lower is better)
Translates to: GEWVGFQQPTCGKMV*GCQGAPGRKQGSKP
Trigger: GGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACATCCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGCTGGAAATGAGCGCTaGAACACAGGGAAGTCTCGA +
Preference number: 2 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGAGNER*NTGKSR
Trigger: TCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGC...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR GCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTGCTGGAAATGAGCGCTaGAACACAGGGAAGTCTCGA +
Preference number: 2 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSAGNER*NTGKSR
Trigger: TCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGC...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR GCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGGATGCGCTTGCCCTTaGCCAGGTTGCGGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDEGCACP*PGCGPG
Trigger: ACCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCC...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp CAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGTCCCAAGGTGGCGCTaGCTCCTAAAAAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: QTGTLGSRSCPRTLILPAVPRWR*LLKRWQ
Trigger: CTGCCACCTTTTTAGGAGCCAGCGCCACCTTGGGAC...TGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp TTGGTGTCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCCGTCCGGCGTGGTTGTaGGGGCAACGCTGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: LVSSGLSSELSPLLWIKLRPAWL*GQRCVE
Trigger: TTCCACACAGCGTTGCCCCCACAACCACGCCGGACG...GAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGACACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
3UTR-3UTR CCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGGGGCACGTCCGGCGTaGTTGTGGGGGCAACGCTGT +
Preference number: 2 (lower is better)
Translates to: NEISSKKSSGKGGEGARPGARPA*LWGQRC
Trigger: ACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR-3UTR CCA 90 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTGGGAACCCAACGCAGCAGTaGCTCCGAGGCAAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: SGGVGGIPTTHMWEDGFGNPTQQ*LRGKCC
Trigger: GCAGCACTTGCCTCGGAGCCACTGCTGCGTTGGGTT...CCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGCCAGCAGCTTGGAGATaGCCGCATCGTCATAGTGGA +
Preference number: 2 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWPAAWR*PHRHSG
Trigger: TCCACTATGACGATGCGGCCATCTCCAAGCTGCTGG...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTCAGGGCCCCGGAAGTTaGGCCCAAAGTTGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGQGPGS*AQSCCC
Trigger: ACAGCAACAACTTTGGGCCCAACTTCCGGGGCCCTG...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496404.1
3UTR-3UTR GCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGCACGCCTTCCAAGAGTaGAGCCTCAGGCAAAAAGCC +
Preference number: 2 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWHAFQE*SLRQKA
Trigger: GGCTTTTTGCCTGAGGCTGCACTCTTGGAAGGCGTG...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTATCTCCACTCCAGGGTaGTCCCCACTACGCCCACGT +
Preference number: 2 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLAISTPG*SPLRPR
Trigger: ACGTGGGCGTAGTGGGGAGCACCCTGGAGTGGAGAT...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp TCTACCAGCAGCAAAAACCAAACCCAGCCCAAAGACGCCAAACATACGGACACCGGAGACACAGACCCCTaGCCTGACCGCCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: STSSKNQTQPKDAKHTDTGDTDP*PDRHRP
Trigger: AGGCCTGTGGCGGTCAGGGCAGGGGTCTGTGTCTCC...GGTGTCCGTATGTTTGGCGTCTTTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTTGTGGGTCGGGCAGGTaGCCCGGCAGGCGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALCGSGR*PGRRGS
Trigger: TGAGCCACGCCTGCCGGGCCACCTGCCCGACCCACA...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp TCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACCTCCTTGGGCTTTTTGTCCCAAGGTaGCGCTGGCTCCTAAAAAGG +
Preference number: 2 (lower is better)
Translates to: SGFWLPCTRAHSPLHLLGLFVPR*RWLLKR
Trigger: CCTTTTTAGGAGCCAGCGCCACCTTGGGACAAAAAG...CCCAAGGAGGTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp TCCCAGTACAAGACTCAGAAACGCCTTCCAGGTCGACCTGGGGCCAGGAGAAGGATGTCAGGGCGCTCCTaGCAGGAAACAAGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: SQYKTQKRLPGRPGARRRMSGRS*QETRQQ
Trigger: TTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACAT...CCTTCTCCTGGCCCCAGGTCGACCTGGAAGGCGTTTCTGAGTCTTGTACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp CAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGTGGGAAGATGGTTTTaGGATGTCAGGGCGCTCCTG +
Preference number: 2 (lower is better)
Translates to: QTGTLGSRSCPRTLILPAVGRWF*DVRALL
Trigger: CAGGAGCGCCCTGACATCCCAAAACCATCTTCCCAC...TGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTGGGCCTCAAGTGTCCTaGGATGACAGGAGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLAGPQVS*DDRSEG
Trigger: GCCCTCACTCCTGTCATCCCAGGACACTTGAGGCCC...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGGCTGGAAATGAGCGCTaGAACACAGGGAAGTCTCGA +
Preference number: 2 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPAGNER*NTGKSR
Trigger: TCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGC...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR GCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTGGGCCCAAAGTTGTTaGTGTACATCTGGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWWAQSC*CTSGRS
Trigger: GCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCA...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496404.1
3UTR-3UTR TCA 90 bp TTGGTGTCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCTGGCTCAGCTGGAAATaGGCGCTGCAACACAGGGAA +
Preference number: 2 (lower is better)
Translates to: LVSSGLSSELSPLLWIKLWLSWK*ALQHRE
Trigger: TTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCA...GAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGACACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
3UTR-3UTR TCA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGTCCGCTGTCGGGCATTaGAGCCCAGCACCTCGATGT +
Preference number: 2 (lower is better)
Translates to: EEHLNYDEVALLGSGPAESAVGH*SPAPRC
Trigger: ACATCGAGGTGCTGGGCTTCAATGCCCGACAGCGGA...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR GCA 90 bp TCTACCAGCAGCAAAAACCAAACCCAGCCCAAAGACGCCAAACATACGGACACCGGCCTCCAGTCCTGCTaGTCGGGACCTATCTGCTGT +
Preference number: 2 (lower is better)
Translates to: STSSKNQTQPKDAKHTDTGLQSC*SGPICC
Trigger: ACAGCAGATAGGTCCCGAGCAGCAGGACTGGAGGCC...GGTGTCCGTATGTTTGGCGTCTTTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR GCA 90 bp TCAGAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCGCTTGCGGATGCGCTTaGCCTTGCCCAGGTTGCGGG +
Preference number: 2 (lower is better)
Translates to: SEPMEYSDWLSESSSCHSACGCA*PCPGCG
Trigger: CCCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGC...GGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
3UTR-3UTR GCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTATCATCTCCAGGTAGTTaGCCTTGTGGACCTCAGACT +
Preference number: 2 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLSSPGS*PCGPQT
Trigger: AGTCTGAGGTCCACAAGGGCAACTACCTGGAGATGA...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR GCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTCAATGACCAACGCCTaGTCCAGCAGCTTAAACCTG +
Preference number: 2 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWSMTNA*SSSLNL
Trigger: CAGGTTTAAGCTGCTGGAGCAGGCGTTGGTCATTGA...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp CTTGTCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTGGCTCCTAAAAAGGTaGCAGCTTTTCTCTCCCATG +
Preference number: 2 (lower is better)
Translates to: LVPVTLQLPPGLSSSTLPWLLKR*QLFSPM
Trigger: CATGGGAGAGAAAAGCTGCCACCTTTTTAGGAGCCA...GGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp TTGGCTTCTGTGCCCCGGGGTCTTTCTCATCCATGTAGCCCAGCTGGGCTTCCACTTTTTGTCCCAAGGTaGCGCTGGCTCCTAAAAAGG +
Preference number: 2 (lower is better)
Translates to: LASVPRGLSHPCSPAGLPLFVPR*RWLLKR
Trigger: CCTTTTTAGGAGCCAGCGCCACCTTGGGACAAAAAG...TGGAAGCCCAGCTGGGCTACATGGATGAGAAAGACCCCGGGGCACAGAAGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTTGCCCTGTCTGGTGCTaGGAGGCTCCAAGCGGGCAG +
Preference number: 2 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALCPVWC*EAPSGQ
Trigger: CTGCCCGCTTGGAGCCTCCCAGCACCAGACAGGGCA...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTGACCTGGATCCAGACTaGAGTGTGGGAATGCGCCAA +
Preference number: 2 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLADLDPD*SVGMRQ
Trigger: TTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTC...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 90 bp CACTGGCTTAAAGTGGCTGGAAATTTCCAATCGCAGACTGGCACTTaGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: HWLKVAGNFQSQTGT*GSRSCPRTLILPAA
Trigger: TGCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTCCAGCCACTTTAAGCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR TCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGTGTGGAAGAACACTTaGATTATGATGAGGTGGCAC +
Preference number: 2 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWVWKNT*IMMRWH
Trigger: GTGCCACCTCATCATAATTCAAGTGTTCTTCCACAC...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR-3UTR GCA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTGCTGGAAATGAGCGCTaGAACACAGGGAAGTCTCGA +
Preference number: 2 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSAGNER*NTGKSR
Trigger: TCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGC...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR GCA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGTGTCGTCGTCCACTCTaGCCTTCCGGCCTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: EEHLNYDEVALLGSGPAECRRPL*PSGLSS
Trigger: TGAAGAGAGGCCGGAAGGGCAGAGTGGACGACGACA...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTCGTCCGGCGTGGTTGTaGGGGCAACGCTGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALRPAWL*GQRCVE
Trigger: TTCCACACAGCGTTGCCCCCACAACCACGCCGGACG...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR-3UTR CCA 90 bp CCAAAGACGCCAAACATACGGACACCACCATCACCACTTTTGGCAGAGATGACTCACCCCAGGCCCAGCTaGGTTTTTCACGCAGCCCTT +
Preference number: 2 (lower is better)
Translates to: PKTPNIRTPPSPLLAEMTHPRPS*VFHAAL
Trigger: AAGGGCTGCGTGAAAAACCCAGCTGGGCCTGGGGTG...AGTCATCTCTGCCAAAAGTGGTGATGGTGGTGTCCGTATGTTTGGCGTCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTATGGAATATTCTGACTaGTTATCAGAGAGCTCATCC +
Preference number: 2 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSMEYSD*LSESSS
Trigger: GGATGAGCTCTCTGATAACCAGTCAGAATATTCCAT...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR GCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTCTGTCACTCTTCAGCTaGCTCCGGGATTGTCGTCGT +
Preference number: 2 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALLSLFS*LRDCRR
Trigger: ACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CCA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCATCATGGACCCCGACTTaGAGCCGAGGCCGGGCCGCA +
Preference number: 2 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSSWTPT*SRGRAA
Trigger: TGCGGCCCGGCCTCGGCTCCAAGTCGGGGTCCATGA...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR CAA 90 bp CCCAGCCCAAAGACGCCAAACATACGGACACCACCATCACCACTTTaGGCAGAGATGACTGACAAACCAAGAAGGACATTCTCAGATCTT +
Preference number: 2 (lower is better)
Translates to: PSPKTPNIRTPPSPL*AEMTDKPRRTFSDL
Trigger: AAGATCTGAGAATGTCCTTCTTGGTTTGTCAGTCATCTCTGCCAAAAGTGGTGATGGTGGTGTCCGTATGTTTGGCGTCTTTGGGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAGTCCCAAGGTGGCGCTaGCTCCTAAAAAGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRVPRWR*LLKRWQ
Trigger: CTGCCACCTTTTTAGGAGCCAGCGCCACCTTGGGAC...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR TCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGATGGCTCAGCTGGAAATaGGCGCTGCAACACAGGGAA +
Preference number: 2 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRWLSWK*ALQHRE
Trigger: TTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCA...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAACTTTTTGTCCCAAGGTaGCGCTGGCTCCTAAAAAGG +
Preference number: 2 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQLFVPR*RWLLKR
Trigger: CCTTTTTAGGAGCCAGCGCCACCTTGGGACAAAAAG...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAATGGCTCCTAAAAAGGTaGCAGCTTTTCTCTCCCATG +
Preference number: 2 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQWLLKR*QLFSPM
Trigger: CATGGGAGAGAAAAGCTGCCACCTTTTTAGGAGCCA...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR CCA 72 bp CAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTaGGACTCCTGGCGCGCCTTGCACCCAGCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: QSWTRPRRGHPG*DSWRALHPAQG
Trigger: GCCCTGGGCTGGGTGCAAGGCGCGCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp GGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATGCTaGGCTCCGACATCTGCAGCCGGGCGGCCACCGGGG +
Preference number: 3 (lower is better)
Translates to: GPRRGWSGGSGC*APTSAAGRPPG
Trigger: CCCCGGTGGCCGCCCGGCTGCAGATGTCGGAGCGCAGCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR GCA 72 bp TGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATaGTGCGCTCCGACATCTGCAGCCGGGCGGCCACCG +
Preference number: 3 (lower is better)
Translates to: WGPRRGWSGGSG*CAPTSAAGRPP
Trigger: CGGTGGCCGCCCGGCTGCAGATGTCGGAGCGCAGCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR CCA 72 bp CTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTaGCTGGGACTCCTGGCGCGCCTTGCACCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: LPKLDPPPPGPP*LGLLARLAPSP
Trigger: TGGGCTGGGTGCAAGGCGCGCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCCAAGGCAGCAAGCCCTaGGTGCTGCGGCTGGGAGGG +
Preference number: 3 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGQGSKP*VLRLGG
Trigger: CCCTCCCAGCCGCAGCACCAAGGGCTTGCTGCCTTG...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCCCTCTCCAGGGGTGCTaGGGCTCCAATCGCTGCTTG +
Preference number: 3 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGPLQGC*GSNRCL
Trigger: CAAGCAGCGATTGGAGCCCAAGCACCCCTGGAGAGG...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp GGGCTGGCGGGCACTGGTGTGTTGGGGTCCGAGGAGATCACCTCGCCCGACTTCGTCATGGACCCCGACTaGGAGCCGAGGCCGGGCCGC +
Preference number: 3 (lower is better)
Translates to: GLAGTGVLGSEEITSPDFVMDPD*EPRPGR
Trigger: GCGGCCCGGCCTCGGCTCCAAGTCGGGGTCCATGAC...GAAGTCGGGCGAGGTGATCTCCTCGGACCCCAACACACCAGTGCCCGCCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CAA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCGCACGTCCGGCGTGGTaGTGGGGGCAACGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLARPAW*WGQRCV
Trigger: CACACAGCGTTGCCCCCACAACCACGCCGGACGTGC...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CAA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAACGGATGCGCTTGCCCTaGCCCAGGTTGCGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: KGGEGARPAWLWGQRCVERMRLP*PRLRAR
Trigger: CCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCCG...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR TCA 72 bp CTGCAGGTGTCACCGGGCCAAGGCTTGGTCAGCTCCTaGCCTCGGCAGGGGAGCACCCGGGGGACTCTGGGA +
Preference number: 3 (lower is better)
Translates to: LQVSPGQGLVSS*PRQGSTRGTLG
Trigger: TCCCAGAGTCCCCCGGGTGCTCCCCTGCCGAGGTCAGGAGCTGACCAAGCCTTGGCCCGGTGACACCTGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp GGGACCATCAGCCCTTGGGGTGGAGACACAGACCCCTaGCCTGACCGCCACAGGCCTCCAGTCCTGCTGCTC +
Preference number: 3 (lower is better)
Translates to: GTISPWGGDTDP*PDRHRPPVLLL
Trigger: GAGCAGCAGGACTGGAGGCCTGTGGCGGTCAGGGCAGGGGTCTGTGTCTCCACCCCAAGGGCTGATGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACCCAGGGCCCCGGAAGTaGGGCCCAAAGTTGTTGCTG +
Preference number: 3 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHPGPRK*GPKLLL
Trigger: CAGCAACAACTTTGGGCCCAACTTCCGGGGCCCTGG...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000496404.1
3UTR GCA 72 bp CATCTCCACTCCAGGGTGCTCCCCACTACGCCCACGTaGAGTGTCAGGGTCGGGCTGGCCTTGCAGACCTGG +
Preference number: 3 (lower is better)
Translates to: HLHSRVLPTTPT*SVRVGLALQTW
Trigger: CCAGGTCTGCAAGGCCAGCCCGACCCTGACACTGCACGTGGGCGTAGTGGGGAGCACCCTGGAGTGGAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp GGTGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTaGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGC +
Preference number: 3 (lower is better)
Translates to: GGSFSLPCGSGR*PGRRGSAGNER
Trigger: GCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR CCA 72 bp AGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCCTTaGTGCTGCGGCTGGGAGGGGTCTGCAGAGGGCACT +
Preference number: 3 (lower is better)
Translates to: RALLAGNKAASP*CCGWEGSAEGT
Trigger: AGTGCCCTCTGCAGACCCCTCCCAGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp GGGCCCAGGCCCAAAGGAGCCCTGGCCAGGCTTTCCTaGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGA +
Preference number: 3 (lower is better)
Translates to: GPRPKGALARLS*VPESNQAEEKG
Trigger: TCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCAGGGCTCCTTTGGGCCTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTGGGTGAGCATCATCTaGCGCTTGGCCACCTGCGTG +
Preference number: 3 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHWVSII*RLATCV
Trigger: CACGCAGGTGGCCAAGCGCAAGATGATGCTCACCCA...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CAA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTCCTCCGTGCCGAACTaGAGGATGTCGTCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHSSVPN*RMSSSS
Trigger: GGAGCTGGACGACATCCTCAAGTTCGGCACGGAGGA...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CAA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTCCTCCACGTCCTTGTaGTCACCTGGCGGGGTGCTA +
Preference number: 3 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHSSTSL*SPGGVL
Trigger: TAGCACCCCGCCAGGTGACAACAAGGACGTGGAGGA...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR TCA 72 bp TGTCACACAGGTGCAGACAGGTCAGGTAGGGGACACTaGGGGCTCCTAGGGCACCGGGCGCCATGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: CHTGADRSGRGH*GLLGHRAPCPP
Trigger: GGGAGGACATGGCGCCCGGTGCCCTAGGAGCCCTCAGTGTCCCCTACCTGACCTGTCTGCACCTGTGTGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp TGGGCACTGCTCCCAACGAGGGCCAACCCCAGTGCTTaGCACTGCTTGTTTGGGGACGAGGGCACGGGAGTG +
Preference number: 3 (lower is better)
Translates to: WALLPTRANPSA*HCLFGDEGTGV
Trigger: CACTCCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTTGGGAGCAGTGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp AAGGTGGGCACTGCTCCCAACGAGGGCCAACCCCAGTaGTTGCCACTGCTTGTTTGGGGACGAGGGCACGGG +
Preference number: 3 (lower is better)
Translates to: KVGTAPNEGQPQ*LPLLVWGRGHG
Trigger: CCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTTGGGAGCAGTGCCCACCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR TCA 72 bp TTTCACGGGGGACGCTGCTTCTGCCTCAGGCGTGTATaGGAGGGCCCTGCAGACGTGCTCACTCCACCCCGA +
Preference number: 3 (lower is better)
Translates to: FHGGRCFCLRRV*EGPADVLTPPR
Trigger: TCGGGGTGGAGTGAGCACGTCTGCAGGGCCCTCTCATACACGCCTGAGGCAGAAGCAGCGTCCCCCGTGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp CTACGCCCACGTGCAGTGTCAGGGTCGGGCTGGCCTTaGAGACCTGGATCCAGACTGGAGTGTGGGAATGCG +
Preference number: 3 (lower is better)
Translates to: LRPRAVSGSGWP*RPGSRLECGNA
Trigger: CGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAAGGCCAGCCCGACCCTGACACTGCACGTGGGCGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp CTGCTCCCAACGAGGGCCAACCCCAGTGCTTGCCACTaGTTGTTTGGGGACGAGGGCACGGGAGTGAGCTTC +
Preference number: 3 (lower is better)
Translates to: LLPTRANPSACH*LFGDEGTGVSF
Trigger: GAAGCTCACTCCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTTGGGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp ACGCTGCTTCTGCCTCAGGCGTGTATGAGAGGGCCCTaGAGACGTGCTCACTCCACCCCGAGTCACCTGAGC +
Preference number: 3 (lower is better)
Translates to: TLLLPQACMRGP*RRAHSTPSHLS
Trigger: GCTCAGGTGACTCGGGGTGGAGTGAGCACGTCTGCAGGGCCCTCTCATACACGCCTGAGGCAGAAGCAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp TCCTCCGTGCCGAACTTGAGGATGTCGTCCAGCTCCTaGTTGGTCATGGACCCCGACTTGGAGCCGAGGCCG +
Preference number: 3 (lower is better)
Translates to: SSVPNLRMSSSS*LVMDPDLEPRP
Trigger: CGGCCTCGGCTCCAAGTCGGGGTCCATGACCAAGCAGGAGCTGGACGACATCCTCAAGTTCGGCACGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR GCA 72 bp CCGGTCCAGGGCCCCGGAAGTTGGGCCCAAAGTTGTTaGTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCT +
Preference number: 3 (lower is better)
Translates to: PVQGPGSWAQSC*CTSGRSRKRPA
Trigger: AGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAACTTCCGGGGCCCTGGACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
3UTR CCA 72 bp TCTCCTCTGGCCGCTCCTCTCGGGCTCTCTCCTTGCTaGCTGGGCTCTCGTGCTTGTCCTCACTCTCCACTC +
Preference number: 3 (lower is better)
Translates to: SPLAAPLGLSPC*LGSRACPHSPL
Trigger: GAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CAA 90 bp TCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACCTCCTTGGGTCGCAGACTGGCACTTaGGGCTCGCGTTCATGCCCG +
Preference number: 3 (lower is better)
Translates to: SGFWLPCTRAHSPLHLLGSQTGT*GSRSCP
Trigger: CGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGA...CCCAAGGAGGTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTACCAGCCAGTGGGAGTaGAAGGCGTCCTGCGGGGGC +
Preference number: 3 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGTSQWE*KASCGG
Trigger: GCCCCCGCAGGACGCCTTCAACTCCCACTGGCTGGT...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CAA 90 bp AGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCATCTCCGTCCCCAACTaGGAGGGGCAGGGTCCGGGG +
Preference number: 3 (lower is better)
Translates to: SDRHLTKSIWLLAPMYPSISVPN*EGQGPG
Trigger: CCCCGGACCCTGCCCCTCCAAGTTGGGGACGGAGAT...GCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCCCCCCGTCCGCGATGTaGAACATGAACTTGAATTTC +
Preference number: 3 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCPPSAM*NMNLNF
Trigger: GAAATTCAAGTTCATGTTCAACATCGCGGACGGGGG...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CAA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCTTGTGGACCTCAGACTaGAAGGGCTCGTTGAGGATC +
Preference number: 3 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLLWTSD*KGSLRI
Trigger: GATCCTCAACGAGCCCTTCAAGTCTGAGGTCCACAA...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR TCA 72 bp CTTGCCACTGCTTGTTTGGGGACGAGGGCACGGGAGTaGGCTTCTGACCCGAGCCAGGACCCTTTGCCAGGA +
Preference number: 3 (lower is better)
Translates to: LATACLGTRARE*ASDPSQDPLPG
Trigger: TCCTGGCAAAGGGTCCTGGCTCGGGTCAGAAGCTCACTCCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp CATGTGAGCCCGCTGACAATCATCTCCACTCCAGGGTaGTCCCCACTACGCCCACGTGCAGTGTCAGGGTCG +
Preference number: 3 (lower is better)
Translates to: HVSPLTIISTPG*SPLRPRAVSGS
Trigger: CGACCCTGACACTGCACGTGGGCGTAGTGGGGAGCACCCTGGAGTGGAGATGATTGTCAGCGGGCTCACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp CACGGGAGTGAGCTTCTGACCCGAGCCAGGACCCTTTaGCAGGAGGCACCGCAGAGCACACAACACGCATGT +
Preference number: 3 (lower is better)
Translates to: HGSELLTRARTL*QEAPQSTQHAC
Trigger: ACATGCGTGTTGTGTGCTCTGCGGTGCCTCCTGGCAAAGGGTCCTGGCTCGGGTCAGAAGCTCACTCCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp CCACTGGTAACAGAGTCCAGGGCCTTCAAGATGCGCTaGGCCGGGGACAGACACCTGCTGGCAGAGGATCCA +
Preference number: 3 (lower is better)
Translates to: PLVTESRAFKMR*AGDRHLLAEDP
Trigger: TGGATCCTCTGCCAGCAGGTGTCTGTCCCCGGCCCAGCGCATCTTGAAGGCCCTGGACTCTGTTACCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp AACGAGGGCCAACCCCAGTGCTTGCCACTGCTTGTTTaGGGACGAGGGCACGGGAGTGAGCTTCTGACCCGA +
Preference number: 3 (lower is better)
Translates to: NEGQPQCLPLLV*GRGHGSELLTR
Trigger: TCGGGTCAGAAGCTCACTCCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp CACTCTCCACTCCACCTCCTTGGGCCTCAAGTGTCCTaGGATGACAGGAGTGAGGGCTGCAGGTGTCACCGG +
Preference number: 3 (lower is better)
Translates to: HSPLHLLGPQVS*DDRSEGCRCHR
Trigger: CCGGTGACACCTGCAGCCCTCACTCCTGTCATCCCAGGACACTTGAGGCCCAAGGAGGTGGAGTGGAGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp CTCTGGCCGCTCCTCTCGGGCTCTCTCCTTGCTGGCTaGGCTCTCGTGCTTGTCCTCACTCTCCACTCTATC +
Preference number: 3 (lower is better)
Translates to: LWPLLSGSLLAG*ALVLVLTLHSI
Trigger: GATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR CCA 72 bp CCCCGGAAGTTGGGCCCAAAGTTGTTGCTGTACATCTaGGAGGAGCCGAAAGCGCCCTGCTGGATGGTGGGG +
Preference number: 3 (lower is better)
Translates to: PRKLGPKLLLYI*EEPKAPCWMVG
Trigger: CCCCACCATCCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAACTTCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
3UTR-3UTR CAA 90 bp CCGAGGAGATCACCTCGCCCGACTTCTTCCCCTCGGGCCCCTCAGGGATCAAGTACTAGGTTTCCCTTTTaGTCCCAAGGTGGCGCTGGC +
Preference number: 3 (lower is better)
Translates to: PRRSPRPTSSPRAPQGSSTRFPF*SQGGAG
Trigger: GCCAGCGCCACCTTGGGACAAAAAGGGAAACCTAGT...ACTTGATCCCTGAGGGGCCCGAGGGGAAGAAGTCGGGCGAGGTGATCTCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CAA 90 bp CTTTCACGGGGGACGCTGCTTCTGCCTCAGGCGTGTATGAGAGGGCCCTGCAGAAGTGCCAGGACTACCTaGGGTCTGGAACCCATCGGT +
Preference number: 3 (lower is better)
Translates to: LSRGTLLLPQACMRGPCRSARTT*GLEPIG
Trigger: ACCGATGGGTTCCAGACCCAAGGTAGTCCTGGCACT...TCTGCAGGGCCCTCTCATACACGCCTGAGGCAGAAGCAGCGTCCCCCGTGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp TTGGCTTCTGTGCCCCGGGGTCTTTCTCATCCATGTAGCCCAGCTGGGCTTCCACCCTCCACGTCGTCCTaGAAGAGTTCCTCCGTGCCG +
Preference number: 3 (lower is better)
Translates to: LASVPRGLSHPCSPAGLPPSTSS*KSSSVP
Trigger: CGGCACGGAGGAACTCTTCAAGGACGACGTGGAGGG...TGGAAGCCCAGCTGGGCTACATGGATGAGAAAGACCCCGGGGCACAGAAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR TCA 72 bp GGTCCCGCCCTCCGGGGTTCAGAGACAGCCTCATTATaGGTGAGGCATATAGGGCTTAGGGAGGGCCAGGCA +
Preference number: 3 (lower is better)
Translates to: GPALRGSETASL*VRHIGLREGQA
Trigger: TGCCTGGCCCTCCCTAAGCCCTATATGCCTCACTCATAATGAGGCTGTCTCTGAACCCCGGAGGGCGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp TCCTCTCGGGCTCTCTCCTTGCTGGCTGGGCTCTCGTaGTTGTCCTCACTCTCCACTCTATCCAAGGCGGCT +
Preference number: 3 (lower is better)
Translates to: SSRALSLLAGLS*LSSLSTLSKAA
Trigger: AGCCGCCTTGGATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR GCA 72 bp ATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTaGCACAGCGTGTGCAACTCCGTGAAGCCCCCGTCC +
Preference number: 3 (lower is better)
Translates to: IFPEDTAARSSF*HSVCNSVKPPS
Trigger: GGACGGGGGCTTCACGGAGTTGCACACGCTGTGGCAGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR GCA 72 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTaGAACACAGGGAAGTCTCGAGGACGGCTAGATATC +
Preference number: 3 (lower is better)
Translates to: WPGRRGSAGNER*NTGKSRGRLDI
Trigger: GATATCTAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
3UTR-3UTR CAA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGACTAGGTTTCCCTTTTaGTCCCAAGGTGGCGCTGGC +
Preference number: 3 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGTRFPF*SQGGAG
Trigger: GCCAGCGCCACCTTGGGACAAAAAGGGAAACCTAGT...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR-3UTR CAA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTTCCGGTCCAGCAGCTaGGAGATGGCCGCATCGTCA +
Preference number: 3 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGFRSSS*EMAASS
Trigger: TGACGATGCGGCCATCTCCAAGCTGCTGGACCGGAA...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR TCA 72 bp TGCCCACAGACCCTGACGCACACTGGAGGCTCCAAGTaGCCGACACTTGACCAAGTCCATCTGGCTTCTGGC +
Preference number: 3 (lower is better)
Translates to: CPQTLTHTGGSK*PTLDQVHLASG
Trigger: GCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR TCA 72 bp TTCCTCTCCAGGGGTGCTTGGGCTCCAATCGCTGCTTaGGGAGTTCAGGACACACACACACACCCAACGGGC +
Preference number: 3 (lower is better)
Translates to: FLSRGAWAPIAA*GVQDTHTHPTG
Trigger: GCCCGTTGGGTGTGTGTGTGTGTCCTGAACTCCTCAAGCAGCGATTGGAGCCCAAGCACCCCTGGAGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTaGGAAGATGGTTTTGGGATGTCAGGGCGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: SGGVGGIPTTHM*EDGFGMSGRSW
Trigger: CCAGGAGCGCCCTGACATCCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp CAGGGTCGGGCTGGCCTTGCAGACCTGGATCCAGACTaGAGTGTGGGAATGCGCCAAGAGGAAGGACTTGTA +
Preference number: 3 (lower is better)
Translates to: QGRAGLADLDPD*SVGMRQEEGLV
Trigger: TACAAGTCCTTCCTCTTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAAGGCCAGCCCGACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp GAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTaGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCC +
Preference number: 3 (lower is better)
Translates to: EAPSDRHLTKSI*LLAPMYPSPLS
Trigger: GGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGACTAGGTTTCCCTTTTaGTCCCAAGGTGGCGCTGGC +
Preference number: 3 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWTRFPF*SQGGAG
Trigger: GCCAGCGCCACCTTGGGACAAAAAGGGAAACCTAGT...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR-3UTR CAA 90 bp TCAGAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCCGGATGCGCTTGCCCTaGCCCAGGTTGCGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SEPMEYSDWLSESSSCHSRMRLP*PRLRAR
Trigger: CCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCCG...GGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
3UTR TCA 72 bp CCTGACGCACACTGGAGGCTCCAAGTGACCGACACTTaGCCAAGTCCATCTGGCTTCTGGCTCCCATGTACC +
Preference number: 3 (lower is better)
Translates to: PDAHWRLQVTDT*PSPSGFWLPCT
Trigger: GGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp TCCCTTCCTCTCCAGGGGTGCTTGGGCTCCAATCGCTaGTTGAGGAGTTCAGGACACACACACACACCCAAC +
Preference number: 3 (lower is better)
Translates to: SLPLQGCLGSNR*LRSSGHTHTPN
Trigger: GTTGGGTGTGTGTGTGTGTCCTGAACTCCTCAAGCAGCGATTGGAGCCCAAGCACCCCTGGAGAGGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp ATGTGGGAAGATGGTTTTGGGATGTCAGGGCGCTCCTaGCAGGAAACAAGGCAGCAAGCCCTTGGTGCTGCG +
Preference number: 3 (lower is better)
Translates to: MWEDGFGMSGRS*QETRQQALGAA
Trigger: CGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACATCCCAAAACCATCTTCCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp CGACTTCTTCCCCTCGGGCCCCTCAGGGATCAAGTCTaGGGTGCTGTACTTCCCGTTGACATGCTCAAACTC +
Preference number: 3 (lower is better)
Translates to: RLLPLGPLRDQV*GAVLPVDMLKL
Trigger: GAGTTTGAGCATGTCAACGGGAAGTACAGCACCCCAGACTTGATCCCTGAGGGGCCCGAGGGGAAGAAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR-3UTR CAA 90 bp TCAGAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCGCACGTCCGGCGTGGTaGTGGGGGCAACGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: SEPMEYSDWLSESSSCHSARPAW*WGQRCV
Trigger: CACACAGCGTTGCCCCCACAACCACGCCGGACGTGC...GGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR TCA 72 bp CTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTaGTTCTACCAGCAGCAAAAACCAAACCCAGCCCAA +
Preference number: 3 (lower is better)
Translates to: LALWARVHARGP*FYQQQKPNPAQ
Trigger: TTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR TCA 72 bp CGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTaGATTATGATGAGGTGGCACTTCTGGGCTCTGGCC +
Preference number: 3 (lower is better)
Translates to: RGCGGNAVWKNT*IMMRWHFWALA
Trigger: GGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR GCA 72 bp TTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATaGCCGAGGACCCTGATTCTACCAGCAGCAAAAACC +
Preference number: 3 (lower is better)
Translates to: FQSQTGTLGSRS*PRTLILPAAKT
Trigger: GGTTTTTGCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp AGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATaGTTTTGGGATGTCAGGGCGCTCCTGGCAGGAAAC +
Preference number: 3 (lower is better)
Translates to: SGWDSNNPHVGR*FWDVRALLAGN
Trigger: GTTTCCTGCCAGGAGCGCCCTGACATCCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp CCAGTACAAGACTCAGAAACGCCTTCCAGGTCGACCTaGGGCCAGGAGAAGGATCACACACAAACAGGCCTA +
Preference number: 3 (lower is better)
Translates to: PVQDSETPSRST*GQEKDHTQTGL
Trigger: TAGGCCTGTTTGTGTGTGATCCTTCTCCTGGCCCCAGGTCGACCTGGAAGGCGTTTCTGAGTCTTGTACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp ACATTCCCAGGATTCTGCACCCCAAGGCACCTTCCCTaGGAAGGTCCCAGTACAAGACTCAGAAACGCCTTC +
Preference number: 3 (lower is better)
Translates to: TFPGFCTPRHLP*EGPSTRLRNAF
Trigger: GAAGGCGTTTCTGAGTCTTGTACTGGGACCTTCCCAGGGAAGGTGCCTTGGGGTGCAGAATCCTGGGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp TCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTaGATCAAGCTCAGCTCCAGCTTGTCCAGGATCTTC +
Preference number: 3 (lower is better)
Translates to: SSGLSSELSPLL*IKLSSSLSRIF
Trigger: GAAGATCCTGGACAAGCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
3UTR-3UTR CAA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCAGCACGTCCGGCGTGGTaGTGGGGGCAACGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: QINEISSKKSSGKGGEGAARPAW*WGQRCV
Trigger: CACACAGCGTTGCCCCCACAACCACGCCGGACGTGC...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR-3UTR CAA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGACGTACTGCGCCACCTaGAAGGAGCTCAGGTACTCG +
Preference number: 3 (lower is better)
Translates to: NEISSKKSSGKGGEGARPTYCAT*KELRYS
Trigger: CGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACGT...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR TCA 72 bp CAGGAGGCACCGCAGAGCACACAACACGCATGTGGATaGACCATAACATGTGAGCCCGCTGACAATCATCTC +
Preference number: 3 (lower is better)
Translates to: QEAPQSTQHACG*TITCEPADNHL
Trigger: GAGATGATTGTCAGCGGGCTCACATGTTATGGTTCATCCACATGCGTGTTGTGTGCTCTGCGGTGCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp TGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTaGGATGTCAGGGCGCTCCTGGCAGGAAACAAGGCA +
Preference number: 3 (lower is better)
Translates to: WDSNNPHVGRWF*DVRALLAGNKA
Trigger: TGCCTTGTTTCCTGCCAGGAGCGCCCTGACATCCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp TCTACCAGCAGCAAAAACCAAACCCAGCCCAAAGACGCCAAACATACGGACACCACTAGGTTTCCCTTTTaGTCCCAAGGTGGCGCTGGC +
Preference number: 3 (lower is better)
Translates to: STSSKNQTQPKDAKHTDTTRFPF*SQGGAG
Trigger: GCCAGCGCCACCTTGGGACAAAAAGGGAAACCTAGT...GGTGTCCGTATGTTTGGCGTCTTTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGTTGGGCCCAAAGTTGTaGCTGTACATCTGGGAGGAG +
Preference number: 3 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDELGPKL*LYIWEE
Trigger: CTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAA...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496404.1
3UTR GCA 72 bp GCAATGCCTTCCAAGACCTTGGCTCAAACATGGCTCTaGAGAAGCCCTACTCAGCACTGGCTTAAAGTGGCT +
Preference number: 3 (lower is better)
Translates to: AMPSKTLAQTWL*RSPTQHWLKVA
Trigger: AGCCACTTTAAGCCAGTGCTGAGTAGGGCTTCTGCAGAGCCATGTTTGAGCCAAGGTCTTGGAAGGCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp GGCTCTGCAGAAGCCCTACTCAGCACTGGCTTAAAGTaGCTGGAAATTTCCAATCGCAGACTGGCACTTTGG +
Preference number: 3 (lower is better)
Translates to: GSAEALLSTGLK*LEISNRRLALW
Trigger: CCAAAGTGCCAGTCTGCGATTGGAAATTTCCAGCCACTTTAAGCCAGTGCTGAGTAGGGCTTCTGCAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CCA 72 bp CATGGGGCAATGCCTTCCAAGACCTTGGCTCAAACATaGCTCTGCAGAAGCCCTACTCAGCACTGGCTTAAA +
Preference number: 3 (lower is better)
Translates to: HGAMPSKTLAQT*LCRSPTQHWLK
Trigger: TTTAAGCCAGTGCTGAGTAGGGCTTCTGCAGAGCCATGTTTGAGCCAAGGTCTTGGAAGGCATTGCCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp AGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCTGTGTGGAAGAACACTaGAATTATGATGAGGTGGCA +
Preference number: 3 (lower is better)
Translates to: SDRHLTKSIWLLAPMYPSCVEEH*NYDEVA
Trigger: TGCCACCTCATCATAATTCAAGTGTTCTTCCACACA...GCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR GCA 72 bp CCTTGGGTCTGGAACCCATCGGTAAAGAGACATCAGTaGTGCAGGTTCGAATCTTCCATACGTCATCCAACT +
Preference number: 3 (lower is better)
Translates to: PWVWNPSVKRHQ*CRFESSIRHPT
Trigger: AGTTGGATGACGTATGGAAGATTCGAACCTGCAGCACTGATGTCTCTTTACCGATGGGTTCCAGACCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR-3UTR CAA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAATCGTCCAGCTCCTGCTaGGTCATGGACCCCGACTTG +
Preference number: 3 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKSSSSC*VMDPDL
Trigger: CAAGTCGGGGTCCATGACCAAGCAGGAGCTGGACGA...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR TCA 72 bp ACGGACACCACCATCACCACTTTTGGCAGAGATGACTaGCAAACCAAGAAGGACATTCTCAGATCTTTTCTC +
Preference number: 3 (lower is better)
Translates to: TDTTITTFGRDD*QTKKDILRSFL
Trigger: GAGAAAAGATCTGAGAATGTCCTTCTTGGTTTGTCAGTCATCTCTGCCAAAAGTGGTGATGGTGGTGTCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR TCA 72 bp ACATACGGACACCACCATCACCACTTTTGGCAGAGATaGCTGACAAACCAAGAAGGACATTCTCAGATCTTT +
Preference number: 3 (lower is better)
Translates to: TYGHHHHHFWQR*LTNQEGHSQIF
Trigger: AAAGATCTGAGAATGTCCTTCTTGGTTTGTCAGTCATCTCTGCCAAAAGTGGTGATGGTGGTGTCCGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCAGGTCACCAAGACGGTaGGGGCAGAGGGGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGRSPRR*GQRGVP
Trigger: TGGCACGCCCCTCTGCCCTCACCGTCTTGGTGACCT...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGACAGCCAGGCGGGCGTTaGGGGCCATGGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRQPGGR*GPWRGG
Trigger: ACCACCCCGCCATGGCCCTCAACGCCCGCCTGGCTG...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACCGCCGCCGCCGCTGCTaGCGCGGAGCTGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHRRRRC*RGAALE
Trigger: TTCAAGGGCAGCTCCGCGGCAGCAGCGGCGGCGGCG...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCGCCCGCTCCTCGTTCTaGCACAGCGTGTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGARSSF*HSVCNS
Trigger: GGAGTTGCACACGCTGTGGCAGAACGAGGAGCGGGC...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGATCCCGGGCCCCGGGGTaGTGGCCACGGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRSRAPG*WPRTAP
Trigger: TGGTGCTGTCCGTGGCCAGCACCCCGGGGCCCGGGA...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GCCCCCAGGGGCAGCCCGGTTCCACCTCCGGAGGTGGGCAGGGTAGGCATCCCAAGGGCCATGGCGGGGTaGTTGGGGTCCTGCGTCATG +
Preference number: 4 (lower is better)
Translates to: APRGSPVPPPEVGRVGIPRAMAG*LGSCVM
Trigger: CATGACGCAGGACCCCAACCACCCCGCCATGGCCCT...TGGGATGCCTACCCTGCCCACCTCCGGAGGTGGAACCGGGCTGCCCCTGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCACCACCTGCCCGGGTTaGGAGGAGGAAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGTTCPG*EEEAEL
Trigger: CAGTTCTGCTTCCTCCTCTCAACCCGGGCAGGTGGT...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp AGTCCCAGGCAGGCCCTCTCCAAGGAGCTGAGCCCCAGCCCGTGTGCACCTCCATCGGCCGCCTTAGCCTaGTCCCCGCAAAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SPRQALSKELSPSPCAPPSAALA*SPQSPG
Trigger: GCCCGGGCTTTGCGGGGAGCAGGCTAAGGCGGCCGA...TGGAGGTGCACACGGGCTGGGGCTCAGCTCCTTGGAGAGGGCCTGCCTGGGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATGCTGCCTGTCGATTGCCTCCTaGCGGAGGCCCCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: PAGWWGPRRGWSGGSGCCLSIAS*RRPPVM
Trigger: CATCACCGGGGGCCTCCGGCAGGAGGCAATCGACAG...GCAGCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp GTCTCCTCTGGCCGCTCCTCTCGGGCTCTCTCCTTGCTGGCTGGGCTCTCGTGCCGGGTCAGCACGTGCTaGCTGGAGAGGCCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VSSGRSSRALSLLAGLSCRVSTC*LERPSR
Trigger: CCGGGAGGGCCTCTCCAGGCAGCACGTGCTGACCCG...GCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAGGAGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR GCA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGTCCTCTCTCGGCAGCTaGTCCGGGGAGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QPLSSLPWAKTRQATAHRSSLGS*SGEGGA
Trigger: GGCCCCGCCCTCCCCGGAGCAGCTGCCGAGAGAGGA...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAGAGCCCCAGCCCGTGTaGACCTCCACCCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEEPQPV*TSTPGP
Trigger: TGGGCCTGGGGTGGAGGTGCACACGGGCTGGGGCTC...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCATCTCCACTCCAGGGTaGTCCCCACTACGCCCACGT +
Preference number: 4 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGISTPG*SPLRPR
Trigger: ACGTGGGCGTAGTGGGGAGCACCCTGGAGTGGAGAT...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCGGGCTCTCTCCTTGCTaGCTGGGCTCTCGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGGLSPC*LGSRAC
Trigger: ACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCC...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGATGTGGGTCGGGCAGGTaGCCCGGCAGGCGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRCGSGR*PGRRGS
Trigger: TGAGCCACGCCTGCCGGGCCACCTGCCCGACCCACA...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACCCCCTGGGAGGGTGGTaGGCGGCAGCAGCACAGACC +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHPLGGW*AAAAQT
Trigger: GGTCTGTGCTGCTGCCGCCCACCACCCTCCCAGGGG...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR TCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAGCCGGAGGCCCCCGGTaGTGCCACCATCAATCCGCT +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEAGGPR*CHHQSA
Trigger: AGCGGATTGATGGTGGCATCACCGGGGGCCTCCGGC...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAACCGCCGTGGCCAGGTTaGTGCCCAGACCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: KGGEGARPAWLWGQRCVEPPWPG*CPDHLP
Trigger: GGGCAGGTGGTCTGGGCATCAACCTGGCCACGGCGG...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACCCAGCCAGTGGGAGTTaGAGGCGTCCTGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHPASGS*RRPAGA
Trigger: TGCCCCCGCAGGACGCCTTCAACTCCCACTGGCTGG...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGCAGCCAGGCGGGCGTTaGGGGCCATGGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWQPGGR*GPWRGG
Trigger: ACCACCCCGCCATGGCCCTCAACGCCCGCCTGGCTG...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCCTGTCGATTGCCTCCTaGCGGAGGCCCCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCLSIAS*RRPPVM
Trigger: CATCACCGGGGGCCTCCGGCAGGAGGCAATCGACAG...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCCTGCGCTCCGACATCTaGAGCCGGGCGGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPLRSDI*SRAATG
Trigger: CCCGGTGGCCGCCCGGCTGCAGATGTCGGAGCGCAG...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCGGCGGCTCAGGATGCTaGGCTCCGACATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCGGSGC*APTSAA
Trigger: GGCTGCAGATGTCGGAGCGCAGCATCCTGAGCCGCC...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTCATGGACCCCGACTTaGAGCCGAGGCCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHSWTPT*SRGRAA
Trigger: TGCGGCCCGGCCTCGGCTCCAAGTCGGGGTCCATGA...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAGGAGGTGGGCAGGGCTaGCGGGCACTGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEGGGQG*RALVCW
Trigger: CCAACACACCAGTGCCCGCCAGCCCTGCCCACCTCC...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCGACCCCACGGGCCAGTaGGGACCCTCCCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLDPTGQ*GPSLPL
Trigger: GAGAGGAAGGGAGGGTCCCCACTGGCCCGTGGGGTC...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCGGCCCCACTCGGCCATaGGCTGCCCCGAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPGPTRP*AAPRTW
Trigger: CCAAGTCCTCGGGGCAGCTCATGGCCGAGTGGGGCC...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp AGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATCCGCCGTGGCCAGGTTaGTGCCCAGACCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: RYLLDGGVPGAVGQAAQDPPWPG*CPDHLP
Trigger: GGGCAGGTGGTCTGGGCATCAACCTGGCCACGGCGG...ATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGCCAGCCAGTGGGAGTTaGAGGCGTCCTGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: QPLSSLPWAKTRQATAHRPASGS*RRPAGA
Trigger: TGCCCCCGCAGGACGCCTTCAACTCCCACTGGCTGG...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp GTCTCCTCTGGCCGCTCCTCTCGGGCTCTCTCCTTGCTGGCTGGGCTCTCGTGCGCGTGTGCAACTCCGTaGAGCCCCCGTCCGCGATGT +
Preference number: 4 (lower is better)
Translates to: VSSGRSSRALSLLAGLSCACATP*SPRPRC
Trigger: ACATCGCGGACGGGGGCTTCACGGAGTTGCACACGC...GCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAGGAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR GCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCGCTCGCCCCCGTCCTTaGACACGCGGCAGAACTCCA +
Preference number: 4 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLARPRP*TRGRTP
Trigger: TGGAGTTCTGCCGCGTGTGCAAGGACGGGGGCGAGC...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACGCTCGCCCCCGTCCTTaGACACGCGGCAGAACTCCA +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHARPRP*TRGRTP
Trigger: TGGAGTTCTGCCGCGTGTGCAAGGACGGGGGCGAGC...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCCCGGGGCACGCCGTCTaGGAAGGTCTCTGCACCATC +
Preference number: 4 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLPGHAV*EGLCTI
Trigger: GATGGTGCAGAGACCTTCGCAGACGGCGTGCCCCGG...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACGGCGGCTCAGGATGCTaGGCTCCGACATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHGGSGC*APTSAA
Trigger: GGCTGCAGATGTCGGAGCGCAGCATCCTGAGCCGCC...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACCGAGCCAGGACCCTTTaGCAGGAGGCACCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHRARTL*QEAPQS
Trigger: GCTCTGCGGTGCCTCCTGGCAAAGGGTCCTGGCTCG...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GCCCCCAGGGGCAGCCCGGTTCCACCTCCGGAGGTGGGCAGGGTAGGCATCCCAGAGCCCATGGGGCAATaGCTTCCAAGACCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: APRGSPVPPPEVGRVGIPEPMGQ*LPRPWL
Trigger: GAGCCAAGGTCTTGGAAGGCATTGCCCCATGGGCTC...TGGGATGCCTACCCTGCCCACCTCCGGAGGTGGAACCGGGCTGCCCCTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GCCCCCAGGGGCAGCCCGGTTCCACCTCCGGAGGTGGGCAGGGTAGGCATCCCATTTCACGGGGGACGCTaGTTCTGCCTCAGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: APRGSPVPPPEVGRVGIPFHGGR*FCLRRV
Trigger: TACACGCCTGAGGCAGAAGCAGCGTCCCCCGTGAAA...TGGGATGCCTACCCTGCCCACCTCCGGAGGTGGAACCGGGCTGCCCCTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACCGTGGGGTCCACAATaGGCGTGTCCGGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEPWGPQ*ACPAAS
Trigger: AGAAGCCGCCGGACACGCCCATTGTGGACCCCACGG...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGTTCTGGCCGATGCGGTaGGCGCGGCTGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RTARYLLDGGVPGAVGQAFWPMR*ARLKAW
Trigger: CCAGGCCTTCAGCCGCGCCCACCGCATCGGCCAGAA...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462991.5
CDS-3UTR CCA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGTCAGCACGTGCTGCCTaGAGAGGCCCTCCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RTARYLLDGGVPGAVGQASARAA*RGPPGA
Trigger: TGCCCCGGGAGGGCCTCTCCAGGCAGCACGTGCTGA...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCCCCCTGGGAGGGTaGTGGGCGGCAGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGGPLGG*WAAAAQ
Trigger: CTGTGCTGCTGCCGCCCACCACCCTCCCAGGGGGCC...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR TCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCGGGCCCCGGGGGCATTaGATCTGTCGATTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLGPRGH*ICRLPP
Trigger: AGGAGGCAATCGACAGATTCAATGCCCCCGGGGCCC...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAGGGCCCCGGGGGCATTaGATCTGTCGATTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEGPRGH*ICRLPP
Trigger: AGGAGGCAATCGACAGATTCAATGCCCCCGGGGCCC...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCTGCGGTGGGCGCGGCTaGAGGCCTGGATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLCGGRG*RPGCHC
Trigger: ACAATGACATCCAGGCCTTCAGCCGCGCCCACCGCA...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAATGCGGTGGGCGCGGCTaGAGGCCTGGATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEECGGRG*RPGCHC
Trigger: ACAATGACATCCAGGCCTTCAGCCGCGCCCACCGCA...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCCAGCCAGGCGGGCGTTaGGGGCCATGGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLSLFSCLRDCRRPLCPSQPGGR*GPWRGG
Trigger: ACCACCCCGCCATGGCCCTCAACGCCCGCCTGGCTG...GGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR TCA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGACGAGGGCACGGGAGTaGGCTTCTGACCCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QPLSSLPWAKTRQATAHRTRARE*ASDPSQ
Trigger: CTGGCTCGGGTCAGAAGCTCACTCCCGTGCCCTCGT...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACGCCAGCCTTAACCCGTaGGCTGCCGGACCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: PSPSGFWLPCTRAHSPLHASLNP*AAGPAR
Trigger: GCGCGCCGGTCCGGCAGCGCACGGGTTAAGGCTGGC...GTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGTCTGCGAAGGTCTCTaGACCATCCGCCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RTARYLLDGGVPGAVGQAVCEGL*TIRPRL
Trigger: GAGCCGGGGGCGGATGGTGCAGAGACCTTCGCAGAC...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGATGCGGGTCAGCACGTaGTGCCTGGAGAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQMRVST*CLERPS
Trigger: GGAGGGCCTCTCCAGGCAGCACGTGCTGACCCGCAT...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATGCTGCCTGCCTTGGCTTCTGTaGCCCGGGGTCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: PAGWWGPRRGWSGGSGCCLPWLL*PGVFLI
Trigger: GATGAGAAAGACCCCGGGGCACAGAAGCCAAGGCAG...GCAGCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGACTCGGGCTCTCTCCTTaGTGGCTGGGCTCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRLGLSP*WLGSRA
Trigger: AGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAG...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAAGCCGTGCGTCACGATaGCCGCCAGCAGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEESRASR*PPAASS
Trigger: ACTACTGGCTGCTGGCGGGCATCGTGACGCACGGCT...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAGCCGTGCGTCACGATaGCCGCCAGCAGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRSRASR*PPAASS
Trigger: ACTACTGGCTGCTGGCGGGCATCGTGACGCACGGCT...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAGGGCCCTGCAGACGTaGTCACTCCACCCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRRALQT*SLHPES
Trigger: TGACTCGGGGTGGAGTGAGCACGTCTGCAGGGCCCT...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGGCCGAGGCGGGCCTTaGACAGAAGAGACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KGGEGARPAWLWGQRCVEGRGGP*TEETWG
Trigger: CCCCCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCC...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CAACGAGGGCCAACCCCAGTGCTTGCCACTGCTTGTTTGGGGACGAGGGCACGGAGGACAGGAACCAGCTaGCGAGGCCGAGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: QRGPTPVLATACLGTRARRTGTS*RGRGGP
Trigger: AGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT...CCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp AGTCCCAGGCAGGCCCTCTCCAAGGAGCTGAGCCCCAGCCCGTGTGCACCTCCATGGGCCGGTGGAGTCTaGTCCCTCCACACCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SPRQALSKELSPSPCAPPWAGGV*SLHTPE
Trigger: TTCAGGGGTGTGGAGGGAGCAGACTCCACCGGCCCA...TGGAGGTGCACACGGGCTGGGGCTCAGCTCCTTGGAGAGGGCCTGCCTGGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGATTGAGGCCCTCCAGCTaGTACGGGTGCAGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRLRPSS*YGCSVP
Trigger: CGGCACACTGCACCCGTACCAGCTGGAGGGCCTCAA...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCCTCAGGGATCAAGTCTaGGGTGCTGTACTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGLRDQV*GAVLPV
Trigger: AACGGGAAGTACAGCACCCCAGACTTGATCCCTGAG...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCGGGCTCTCTCCTTGCTaGCTGGGCTCTCGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCGLSPC*LGSRAC
Trigger: ACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCC...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGAGGGCCATGGCGGGGTaGTTGGGGTCCTGCGTCATG +
Preference number: 4 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQRAMAG*LGSCVM
Trigger: CATGACGCAGGACCCCAACCACCCCGCCATGGCCCT...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCGGTCCCCGGCGCGGTTaGTCAGGCGGCTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: LSLFSCLRDCRRPLCPSGGPRRG*SGGSGC
Trigger: GCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACC...GCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTGGTCCCCGGCGCGGTTaGTCAGGCGGCTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSGPRRG*SGGSGC
Trigger: GCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACC...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGCCGAAAGCGCCCTGCTaGATGGTGGGGTCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGPKAPC*MVGSPA
Trigger: CGCCGGGGACCCCACCATCCAGCAGGGCGCTTTCGG...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACTTTTCTCTCCCATGTaGGTCGGGCAGGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEELFSPM*VGQVAR
Trigger: CCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAG...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACATATCTGCTGGATGGTaGGGTCCCCGGCGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHISAGW*GPRRGW
Trigger: CCAACCGCGCCGGGGACCCCACCATCCAGCAGATAT...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
CDS-3UTR TCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCACCACCTGCCCGGGTTaGGAGGAGGAAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLTTCPG*EEEAEL
Trigger: CAGTTCTGCTTCCTCCTCTCAACCCGGGCAGGTGGT...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp GACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGCCCGCCGTGGCCAGGTTaGTGCCCAGACCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: DWHFGLAFMPEDPDSTSSPPWPG*CPDHLP
Trigger: GGGCAGGTGGTCTGGGCATCAACCTGGCCACGGCGG...GCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATCCGCCGTGGCCAGGTTaGTGCCCAGACCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNPPWPG*CPDHLP
Trigger: GGGCAGGTGGTCTGGGCATCAACCTGGCCACGGCGG...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAGCACCACCAGGTGGGTaGGCATCATCTTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRAPPGG*ASSCAW
Trigger: CCAAGCGCAAGATGATGCTCACCCACCTGGTGGTGC...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp GGGCTGGCGGGCACTGGTGTGTTGGGGTCCGAGGAGATCACCTCGCCCGACTTCTCCGCTGTCGGGCATTaGAGCCCAGCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GLAGTGVLGSEEITSPDFSAVGH*SPAPRC
Trigger: ACATCGAGGTGCTGGGCTTCAATGCCCGACAGCGGA...GAAGTCGGGCGAGGTGATCTCCTCGGACCCCAACACACCAGTGCCCGCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR TCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGATCCGCTGTCGGGCATTaGAGCCCAGCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRSAVGH*SPAPRC
Trigger: ACATCGAGGTGCTGGGCTTCAATGCCCGACAGCGGA...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp CCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATGCTGCTGGCTCAGCTGGAAATaGGCGCTGCAACACAGGGAA +
Preference number: 4 (lower is better)
Translates to: PAGWWGPRRGWSGGSGCCWLSWK*ALQHRE
Trigger: TTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCA...GCAGCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAATCCGGCGGCTTCTCCTaGTTGTCGTCCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEESGGFS*LSSLSF
Trigger: GAAGCTGAGGGACGACAAGCAGGAGAAGCCGCCGGA...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp AGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATCTGTCGATTGCCTCCTaGCGGAGGCCCCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: RYLLDGGVPGAVGQAAQDLSIAS*RRPPVM
Trigger: CATCACCGGGGGCCTCCGGCAGGAGGCAATCGACAG...ATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAGGCGGGGTGCTACCGTaGTTCTTCTTTGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRGGVLP*FFFALA
Trigger: CGCCAGTGCAAAGAAGAAGCACGGTAGCACCCCGCC...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp TTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGTCCTCTCTCGGCAGCTaGTCCGGGGAGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LGPKLLLYIWEEPKAPCWSSLGS*SGEGGA
Trigger: GGCCCCGCCCTCCCCGGAGCAGCTGCCGAGAGAGGA...CCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTCTGCCACAGCGTGTaGAACTCCGTGAAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHFCHSV*NSVKPP
Trigger: CGGGGGCTTCACGGAGTTGCACACGCTGTGGCAGAA...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTCAGGCGGCTCAGGATaGTGCGCTCCGACATCTGCA +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHSGGSG*CAPTSA
Trigger: TGCAGATGTCGGAGCGCAGCATCCTGAGCCGCCTGA...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp TATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATGCTTTGAGGCCCTCCAGCTaGTACGGGTGCAGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: YLLDGGVPGAVGQAAQDALRPSS*YGCSVP
Trigger: CGGCACACTGCACCCGTACCAGCTGGAGGGCCTCAA...AGCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462991.5
CDS-3UTR CCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGTTCTGGCCGATGCGGTaGGCGCGGCTGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGFWPMR*ARLKAW
Trigger: CCAGGCCTTCAGCCGCGCCCACCGCATCGGCCAGAA...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000462991.5
CDS-3UTR CCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGACGGGCACTGGTGTGTTaGGGTCCGAGGAGATCACCT +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRRALVC*GPRRSP
Trigger: AGGTGATCTCCTCGGACCCCAACACACCAGTGCCCG...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGTCCCCGGCGCGGTTaGTCAGGCGGCTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWGPRRG*SGGSGC
Trigger: GCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACC...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGCTTTTCTCTCCCATGTaGGTCGGGCAGGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQLFSPM*VGQVAR
Trigger: CCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAG...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGCTGTCCAGCCTCCCGTaGGCGAAGACCAGACAAGCC +
Preference number: 4 (lower is better)
Translates to: QPLSSLPWAKTRQATAHRLSSLP*AKTRQA
Trigger: GGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAG...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 72 bp GTGGGCACTGCTCCCAACGAGGGCCAACCCCAGTGCTaGCCACTGCTTGTTTGGGGACGAGGGCACGGGAGT +
Preference number: 4 (lower is better)
Translates to: VGTAPNEGQPQC*PLLVWGRGHGS
Trigger: ACTCCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTTGGGAGCAGTGCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 72 bp TCCGTGCCGAACTTGAGGATGTCGTCCAGCTCCTGCTaGGTCATGGACCCCGACTTGGAGCCGAGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SVPNLRMSSSSC*VMDPDLEPRPG
Trigger: GCCCGGCCTCGGCTCCAAGTCGGGGTCCATGACCAAGCAGGAGCTGGACGACATCCTCAAGTTCGGCACGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR CAA 72 bp TCCGTCTCCTCTGGCCGCTCCTCTCGGGCTCTCTCCTaGCTGGCTGGGCTCTCGTGCTTGTCCTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: SVSSGRSSRALS*LAGLSCLSSLS
Trigger: GGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAGGAGACGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
3UTR CAA 72 bp CCCGGTCCAGGGCCCCGGAAGTTGGGCCCAAAGTTGTaGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PGPGPRKLGPKL*LYIWEEPKAPC
Trigger: GCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAACTTCCGGGGCCCTGGACCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR TCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACCCAGTAGGCCTGCTTaGGGTTGTCGTAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEPSRPA*GCRSRG
Trigger: TCCCCTACTACGACAACCTCAAGCAGGCCTACTGGG...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGCCTCCACGTCGTCCTTaGAGAGTTCCTCCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQPPRRP*RVPPCR
Trigger: TCGGCACGGAGGAACTCTTCAAGGACGACGTGGAGG...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCCCAGCCAGTGGGAGTTaGAGGCGTCCTGCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLSLFSCLRDCRRPLCPSPASGS*RRPAGA
Trigger: TGCCCCCGCAGGACGCCTTCAACTCCCACTGGCTGG...GGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR TCA 90 bp TGTCCCCTGCCCACAGACCCTGACGCACACTGGAGGCTCCAAGTGACCGACACTTCAGGTAGGGGACACTaGGGGCTCCTAGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: CPLPTDPDAHWRLQVTDTSGRGH*GLLGHR
Trigger: CCGGTGCCCTAGGAGCCCTCAGTGTCCCCTACCTGA...AGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCAGGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGTCCAGCTGGTACGGGTaGAGTGTGCCGCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWSSWYG*SVPPVE
Trigger: CTCCACAGGCGGCACACTGCACCCGTACCAGCTGGA...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACCTCCTTGGGGGATGCGCTTGCCCTTaGCCAGGTTGCGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SGFWLPCTRAHSPLHLLGGCACP*PGCGPG
Trigger: ACCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCC...CCCAAGGAGGTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTGGATGCGCTTGCCCTTaGCCAGGTTGCGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSGCACP*PGCGPG
Trigger: ACCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCC...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTGGATGCGCTTGCCCTTaGCCAGGTTGCGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VTLQLPPGLSSSTLPFRPGCACP*PGCGPG
Trigger: ACCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCC...AGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR GCA 90 bp CTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCGCTTGCGGATGCGCTTaGCCTTGCCCAGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: LSLFSCLRDCRRPLCPSGACGCA*PCPGCG
Trigger: CCCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGC...GCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR GCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTCGGGTCAGCACGTGCTaGCTGGAGAGGCCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCRVSTC*LERPSR
Trigger: CCGGGAGGGCCTCTCCAGGCAGCACGTGCTGACCCG...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGCGGCCCTCCGGAGCTaGTCCTCAATGACCAACGCC +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGAALRS*SSMTNA
Trigger: GGCGTTGGTCATTGAGGAGCAGCTCCGGAGGGCCGC...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGGGTGGTTGGGGTCCTaGGTCATGTTCAGGTACGCG +
Preference number: 4 (lower is better)
Translates to: KGGEGARPAWLWGQRCVEGWLGS*VMFRYA
Trigger: CGCGTACCTGAACATGACGCAGGACCCCAACCACCC...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGTCAGGCGGCTCAGGATaGTGCGCTCCGACATCTGCA +
Preference number: 4 (lower is better)
Translates to: RTARYLLDGGVPGAVGQASGGSG*CAPTSA
Trigger: TGCAGATGTCGGAGCGCAGCATCCTGAGCCGCCTGA...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CTTTCACGGGGGACGCTGCTTCTGCCTCAGGCGTGTATGAGAGGGCCCTGCAGAACCTGCCCTGTCTGGTaGTGGGAGGCTCCAAGCGGG +
Preference number: 4 (lower is better)
Translates to: LSRGTLLLPQACMRGPCRTCPVW*WEAPSG
Trigger: CCCGCTTGGAGCCTCCCAGCACCAGACAGGGCAGGT...TCTGCAGGGCCCTCTCATACACGCCTGAGGCAGAAGCAGCGTCCCCCGTGAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp ATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCCTTGGTGCTGCGGCTCCCACTACGCCCACGTaGAGTGTCAGGGTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: MSGRSWQETRQQALGAAAPTTPT*SVRVGL
Trigger: CAGCCCGACCCTGACACTGCACGTGGGCGTAGTGGG...AGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGCCCACGCCCTGTCCCCTaGCCACAGACCCTGACGCAC +
Preference number: 4 (lower is better)
Translates to: DWHFGLAFMPEDPDSTSSPRPVP*PQTLTH
Trigger: GTGCGTCAGGGTCTGTGGGCAGGGGACAGGGCGTGG...GCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGTTGAGGCCCTCCAGCTaGTACGGGTGCAGTGTGCCG +
Preference number: 4 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWLRPSS*YGCSVP
Trigger: CGGCACACTGCACCCGTACCAGCTGGAGGGCCTCAA...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGACCAGGTAGGGCCCTTTaGAGTGGCCCTCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRPGRAL*SGPPCR
Trigger: TCTACAAGGAGGGCCACTCCAAAGGGCCCTACCTGG...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGACCCCCTTTGGAGGACTaGACATCAGGGATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRPPLED*TSGMGV
Trigger: CACACCCATCCCTGATGTCCAGTCCTCCAAAGGGGG...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTCTCTCCTTGCTGGCTaGGCTCTCGTGCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHSLLAG*ALVLVL
Trigger: GAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGA...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAATCTCTCCTTGCTGGCTaGGCTCTCGTGCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEESLLAG*ALVLVL
Trigger: GAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGA...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCTCTCTCCTTGCTGGCTaGGCTCTCGTGCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLSLLAG*ALVLVL
Trigger: GAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGA...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACCTGTCCCCTCTGCTGTaGATCAAGCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHLSPLL*IKLSSS
Trigger: GCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAG...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAACCATGGCGGGGTGGTTaGGGTCCTGCGTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: KGGEGARPAWLWGQRCVEPWRGG*GPASCS
Trigger: TGAACATGACGCAGGACCCCAACCACCCCGCCATGG...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GTTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGGTCCCCGGCGCGGTTaGTCAGGCGGCTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: VGPKVVAVHLGGAESALLGPRRG*SGGSGC
Trigger: GCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACC...CAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTGGGCGCCCTGCTGGATGGTaGGGTCCCCGGCGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: SGGVGGIPTTHMWEDGFGRPAGW*GPRRGW
Trigger: CCAACCGCGCCGGGGACCCCACCATCCAGCAGGGCG...CCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGTGTGGGTCGGGCAGGTaGCCCGGCAGGCGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPCGSGR*PGRRGS
Trigger: TGAGCCACGCCTGCCGGGCCACCTGCCCGACCCACA...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATGGGGCACGTCCGGCGTaGTTGTGGGGGCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNGARPA*LWGQRC
Trigger: ACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp CAACGAGGGCCAACCCCAGTGCTTGCCACTGCTTGTTTGGGGACGAGGGCACGGCATGTCCTCCCCAGCTaGGCTGAGTCCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRGPTPVLATACLGTRARHVLPS*AESTGQ
Trigger: CTGCCCTGTGGACTCAGCCCAGCTGGGGAGGACATG...CCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GCCAAGGCTTGGTCAGCTCCTGACCTCGGCAGGGGAGCACCCGGGGGACTCTGGGTGGGAAGATGGTTTTaGGATGTCAGGGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AKAWSAPDLGRGAPGGLWVGRWF*DVRALL
Trigger: CAGGAGCGCCCTGACATCCCAAAACCATCTTCCCAC...CCAGAGTCCCCCGGGTGCTCCCCTGCCGAGGTCAGGAGCTGACCAAGCCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGATTGCCACTGCTTGTTTaGGGACGAGGGCACGGGAGT +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRLPLLV*GRGHGS
Trigger: ACTCCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAA...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCGGGGCCACCCTGGCTaGGACTCCTGGCGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: SDRHLTKSIWLLAPMYPSRGHPG*DSWRAL
Trigger: CAAGGCGCGCCAGGAGTCCCAGCCAGGGTGGCCCCG...GCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 72 bp GGCCAGTGGGGACCCTCCCTTCCTCTCCAGGGGTGCTaGGGCTCCAATCGCTGCTTGAGGAGTTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: GQWGPSLPLQGC*GSNRCLRSSGH
Trigger: GTGTCCTGAACTCCTCAAGCAGCGATTGGAGCCCAAGCACCCCTGGAGAGGAAGGGAGGGTCCCCACTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp GCTTCCAAAGCTGGACCCGCCCCCGCCGGGGCCACCCTGGCTGGGACTCCTGGCACCATCTTCTTCTTCTaGCATCTCGTCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: ASKAGPAPAGATLAGTPGTIFFF*HLVLIL
Trigger: GAGAATGAGGACGAGATGTCAGAAGAAGAAGATGGT...GCCAGGAGTCCCAGCCAGGGTGGCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAACCCAGTAGGCCTGCTTaGGGTTGTCGTAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: KGGEGARPAWLWGQRCVEPSRPA*GCRSRG
Trigger: TCCCCTACTACGACAACCTCAAGCAGGCCTACTGGG...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGTGTCCCCCGTGTAGGTaGCCACGTAGAAGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGCPPCR*PRRSRA
Trigger: CGCCCGACTTCTACGTGGTCACCTACACGGGGGACA...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp AGTCCCAGGCAGGCCCTCTCCAAGGAGCTGAGCCCCAGCCCGTGTGCACCTCCACAGCATGAGCTTCCCTaGAGACTTGACCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPRQALSKELSPSPCAPPQHELP*RLDQGA
Trigger: AGCTCCCTGGTCAAGTCTTCAGGGAAGCTCATGCTG...TGGAGGTGCACACGGGCTGGGGCTCAGCTCCTTGGAGAGGGCCTGCCTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGGCCGGAGGCCCCCGGTaGTGCCACCATCAATCCGCT +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWAGGPR*CHHQSA
Trigger: AGCGGATTGATGGTGGCATCACCGGGGGCCTCCGGC...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCCCTCCACGTCGTCCTTaGAGAGTTCCTCCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPPPRRP*RVPPCR
Trigger: TCGGCACGGAGGAACTCTTCAAGGACGACGTGGAGG...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACAGGCATCGTTGTAGTTaGCCTGCTTGCGGATGCGCT +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHRHRCS*PACGCA
Trigger: AGCGCATCCGCAAGCAGGTCAACTACAACGATGCCT...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGGCATGCCCCAGCGCATaGTGGCGTTCAGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWACPSA*WRSERP
Trigger: AGGCCTTTCTGAACGCCATCATGCGCTGGGGCATGC...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAACTGGAGGCTCCAAGTaGCCGACACTTGACCAAGTC +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEETGGSK*PTLDQV
Trigger: GACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGT...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CTTTCACGGGGGACGCTGCTTCTGCCTCAGGCGTGTATGAGAGGGCCCTGCAGACGGAGGCACTGTGGATaGTGGCGCTGTCGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: LSRGTLLLPQACMRGPCRRRHCG*WRCRSP
Trigger: CGGACTTCGACAGCGCCAGCATCCACAGTGCCTCCG...TCTGCAGGGCCCTCTCATACACGCCTGAGGCAGAAGCAGCGTCCCCCGTGAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGCGGAGGCACTGTGGATaGTGGCGCTGTCGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGRRHCG*WRCRSP
Trigger: CGGACTTCGACAGCGCCAGCATCCACAGTGCCTCCG...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGCATCGATCTCCCAGGTaGACTGGTCGTAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QPLSSLPWAKTRQATAHRHRSPR*TGRRAG
Trigger: ACCTGCCCTACGACCAGTGCACCTGGGAGATCGATG...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACCGTGCTTCTTCTTTaGACTGGCGGCCAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRTVLLL*TGGQVP
Trigger: GGGAACTTGGCCGCCAGTGCAAAGAAGAAGCACGGT...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATGCTTGCGGATGCGCTTaGCCTTGCCCAGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNACGCA*PCPGCG
Trigger: CCCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGC...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GTCTCCTCTGGCCGCTCCTCTCGGGCTCTCTCCTTGCTGGCTGGGCTCTCGTGCCTGTCACTCTTCAGCTaGCTCCGGGATTGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: VSSGRSSRALSLLAGLSCLSLFS*LRDCRR
Trigger: ACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG...GCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAGGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR GCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGCCGGGGCACGCCGTCTaGGAAGGTCTCTGCACCATC +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWPGHAV*EGLCTI
Trigger: GATGGTGCAGAGACCTTCGCAGACGGCGTGCCCCGG...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTGGGCGGGTCAGCACGTGCTaGCTGGAGAGGCCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SGGVGGIPTTHMWEDGFGRVSTC*LERPSR
Trigger: CCGGGAGGGCCTCTCCAGGCAGCACGTGCTGACCCG...CCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGCCCGCTCCTCGTTCTaGCACAGCGTGTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGARSSF*HSVCNS
Trigger: GGAGTTGCACACGCTGTGGCAGAACGAGGAGCGGGC...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTAGCCGTGCGTCACGATaGCCGCCAGCAGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: VTLQLPPGLSSSTLPFRPSRASR*PPAASS
Trigger: ACTACTGGCTGCTGGCGGGCATCGTGACGCACGGCT...AGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR GCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGCGGCCCTCCGGAGCTaGTCCTCAATGACCAACGCC +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWAALRS*SSMTNA
Trigger: GGCGTTGGTCATTGAGGAGCAGCTCCGGAGGGCCGC...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTCTGCGCTCCGACATCTaGAGCCGGGCGGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSLRSDI*SRAATG
Trigger: CCCGGTGGCCGCCCGGCTGCAGATGTCGGAGCGCAG...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GCCAAGGCTTGGTCAGCTCCTGACCTCGGCAGGGGAGCACCCGGGGGACTCTGGTGGGCCCAAAGTTGTTaGTGTACATCTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AKAWSAPDLGRGAPGGLWWAQSC*CTSGRS
Trigger: GCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCA...CCAGAGTCCCCCGGGTGCTCCCCTGCCGAGGTCAGGAGCTGACCAAGCCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACATTCCCAGGATTCTaGACCCCAAGGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRTFPGF*TPRHLP
Trigger: GGGAAGGTGCCTTGGGGTGCAGAATCCTGGGAATGT...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGTCCTTGTTGTCACCTaGCGGGGTGCTACCGTGCTT +
Preference number: 4 (lower is better)
Translates to: RTARYLLDGGVPGAVGQAVLVVT*RGATVL
Trigger: AAGCACGGTAGCACCCCGCCAGGTGACAACAAGGAC...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACCCAGCAGCTTGGAGATaGCCGCATCGTCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHPAAWR*PHRHSG
Trigger: TCCACTATGACGATGCGGCCATCTCCAAGCTGCTGG...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CCTCCAGGCAGAACTCTCCCCACGCCTTCCAAGAGTGCAGCCTCAGGCAAAAAGTCAGCACGTGCTGCCTaGAGAGGCCCTCCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PPGRTLPTPSKSAASGKKSARAA*RGPPGA
Trigger: TGCCCCGGGAGGGCCTCTCCAGGCAGCACGTGCTGA...CTTTTTGCCTGAGGCTGCACTCTTGGAAGGCGTGGGGAGAGTTCTGCCTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCAGGGCTGGCGGGCACTaGTGTGTTGGGGTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SLSLFSCLRDCRRPLCPSRAGGH*CVGVRG
Trigger: TCCTCGGACCCCAACACACCAGTGCCCGCCAGCCCT...GGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTAGGAGGTGGGCAGGGCTaGCGGGCACTGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLGGGQG*RALVCW
Trigger: CCAACACACCAGTGCCCGCCAGCCCTGCCCACCTCC...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCTTCTCCGTCTCCTCTaGCCGCTCCTCTCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSLLRLL*PLLSGS
Trigger: AGAGCCCGAGAGGAGCGGCCAGAGGAGACGGAGAAG...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp ACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTCTCGGATGCGGGACAGCATaGATGGCAGCCGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: TLQLPPGLSSSTLPFRPLGCGTA*MAAGSR
Trigger: ACGTGACCCGGCTGCCATCCATGCTGTCCCGCATCC...GAGAGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CCA 90 bp AGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCAAGCGCCCTGCTGGATaGTGGGGTCCCCGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: SDRHLTKSIWLLAPMYPSKRPAG*WGPRRG
Trigger: ACCGCGCCGGGGACCCCACCATCCAGCAGGGCGCTT...GCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGTCCCAGGCAGGCCCTCTCCAAGGAGCTGAGCCCCAGCCCGTGTGCACCTCCATTGTTGCTGTACATCTaGGAGGAGCCGAAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SPRQALSKELSPSPCAPPLLLYI*EEPKAP
Trigger: GGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAA...TGGAGGTGCACACGGGCTGGGGCTCAGCTCCTTGGAGAGGGCCTGCCTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTGGGTGTGGGTCGGGCAGGTaGCCCGGCAGGCGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SGGVGGIPTTHMWEDGFGCGSGR*PGRRGS
Trigger: TGAGCCACGCCTGCCGGGCCACCTGCCCGACCCACA...CCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGTCCCAAGGTGGCGCTaGCTCCTAAAAAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQVPRWR*LLKRWQ
Trigger: CTGCCACCTTTTTAGGAGCCAGCGCCACCTTGGGAC...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TCCCAGTACAAGACTCAGAAACGCCTTCCAGGTCGACCTGGGGCCAGGAGAAGGGGGGCACGTCCGGCGTaGTTGTGGGGGCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: SQYKTQKRLPGRPGARRRGARPA*LWGQRC
Trigger: ACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC...CCTTCTCCTGGCCCCAGGTCGACCTGGAAGGCGTTTCTGAGTCTTGTACTGGGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCCACCCCAGGCCCAGCTaGGTTTTTCACGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPHPRPS*VFHAAL
Trigger: AAGGGCTGCGTGAAAAACCCAGCTGGGCCTGGGGTG...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGTCCCAGGCAGGCCCTCTCCAAGGAGCTGAGCCCCAGCCCGTGTGCACCTCCAGACCTGGATCCAGACTaGAGTGTGGGAATGCGCCAA +
Preference number: 4 (lower is better)
Translates to: SPRQALSKELSPSPCAPPDLDPD*SVGMRQ
Trigger: TTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTC...TGGAGGTGCACACGGGCTGGGGCTCAGCTCCTTGGAGAGGGCCTGCCTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TGTTGGCTACAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGGGACCATCAGCCCTTaGGGTGGAGACACAGACCCC +
Preference number: 4 (lower is better)
Translates to: CWLQPLSSLPWAKTRQATGTISP*GGDTDP
Trigger: GGGGTCTGTGTCTCCACCCCAAGGGCTGATGGTCCC...CGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTGTAGCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCCGCAGACTGGCACTTTaGGCTCGCGTTCATGCCCGA +
Preference number: 4 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPRRLAL*ARVHAR
Trigger: TCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCG...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAATCCACTCCACCTCCTTaGGCCTCAAGTGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: KGGEGARPAWLWGQRCVESTPPP*ASSVLG
Trigger: TCCCAGGACACTTGAGGCCCAAGGAGGTGGAGTGGA...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACCCTCTTAGCTGGGCCTaGGCCGGTGGAGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSPSGFWLPCTRAHSPLHPLSWA*AGGVCS
Trigger: GGAGCAGACTCCACCGGCCCAGGCCCAGCTAAGAGG...GTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCGGTCTGCACGGAGGGTaGGGAGCAGAGGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: LSLFSCLRDCRRPLCPSGGLHGG*GAEEET
Trigger: CGTTTCCTCCTCTGCTCCCCACCCTCCGTGCAGACC...GCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491020.1
CDS-3UTR TCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGCGGAGGGGAGATGGTaGCCGTCTCTACAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCAEGRW*PSLQPQ
Trigger: CTGCGGCTGTAGAGACGGTCACCATCTCCCCTCCGC...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp AGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCGGGCAGCGGCGGGTTaGGGCAATGCAGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SDRHLTKSIWLLAPMYPSRAAAG*GNAGGR
Trigger: CCTACCACCTGCATTGCCTCAACCCGCCGCTGCCCG...GCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGTGTCCCCCGTGTAGGTaGCCACGTAGAAGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWCPPCR*PRRSRA
Trigger: CGCCCGACTTCTACGTGGTCACCTACACGGGGGACA...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTGCTCCACCCGGACAATaGGCTCGGTCTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGAPPGQ*ARSWPA
Trigger: TGCCGGCCAAGACCGAGCTCATTGTCCGGGTGGAGC...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp CTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCGCACCACCAGGTGGGTaGGCATCATCTTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSLFSCLRDCRRPLCPSGAPPGG*ASSCAW
Trigger: CCAAGCGCAAGATGATGCTCACCCACCTGGTGGTGC...GCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR TCA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGGCGTGTGCAACTCCGTaGAGCCCCCGTCCGCGATGT +
Preference number: 4 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPACATP*SPRPRC
Trigger: ACATCGCGGACGGGGGCTTCACGGAGTTGCACACGC...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp CAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCACAGAGCAAGCCTGCCTaGGAGGAAGGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: QTGTLGSRSCPRTLILPAQSKPA*EEGAQG
Trigger: CCCCTGTGCGCCTTCCTCTCAGGCAGGCTTGCTCTG...TGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCGGCTTGGTCAGCTCCTaGCCTCGGCAGGGGAGCACC +
Preference number: 4 (lower is better)
Translates to: EISNRRLALWARVHARGPGLVSS*PRQGST
Trigger: GGTGCTCCCCTGCCGAGGTCAGGAGCTGACCAAGCC...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTGCAGCTCCTCCTCGGTaGCCACTGGGCCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLAAAPPR*PLGPAC
Trigger: GCATGCGGGGCCCAGTGGGCACCGAGGAGGAGCTGC...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGTACGGGTGCAGTGTaGCGCCTGTGGAGTCGATGT +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGGTGAV*RLWSRC
Trigger: ACATCGACTCCACAGGCGGCACACTGCACCCGTACC...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAAAGATGAGCACACGGTaGCCCTCATCCCGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KGGEGARPAWLWGQRCVEKMSTR*PSSRSF
Trigger: GAAACTGCGGGATGAGGGGCACCGTGTGCTCATCTT...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGACCGTGCTTCTTCTTTaGACTGGCGGCCAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: RTARYLLDGGVPGAVGQATVLLL*TGGQVP
Trigger: GGGAACTTGGCCGCCAGTGCAAAGAAGAAGCACGGT...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGATGCGCTTGCCCTTaGCCAGGTTGCGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCGCACP*PGCGPG
Trigger: ACCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCC...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp TCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCAGCGCTTGCGGATGCGCTTaGCCTTGCCCAGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: SGLSSELSPLLWIKLSSSACGCA*PCPGCG
Trigger: CCCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGC...GCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATGCCCGCTCCTCGTTCTaGCACAGCGTGTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNARSSF*HSVCNS
Trigger: GGAGTTGCACACGCTGTGGCAGAACGAGGAGCGGGC...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCTCATCTCCAGGTAGTTaGCCTTGTGGACCTCAGACT +
Preference number: 4 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCSSPGS*PCGPQT
Trigger: AGTCTGAGGTCCACAAGGGCAACTACCTGGAGATGA...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCAGCGCGGCCCTCCGGAGCTaGTCCTCAATGACCAACGCC +
Preference number: 4 (lower is better)
Translates to: SGLSSELSPLLWIKLSSSAALRS*SSMTNA
Trigger: GGCGTTGGTCATTGAGGAGCAGCTCCGGAGGGCCGC...GCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTGGGTGGTTGGGGTCCTaGGTCATGTTCAGGTACGCG +
Preference number: 4 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSGWLGS*VMFRYA
Trigger: CGCGTACCTGAACATGACGCAGGACCCCAACCACCC...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCAGCGGCGGCTCAGGATGCTaGGCTCCGACATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGLSSELSPLLWIKLSSSGGSGC*APTSAA
Trigger: GGCTGCAGATGTCGGAGCGCAGCATCCTGAGCCGCC...GCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCTGGGCCCAAAGTTGTTaGTGTACATCTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLWAQSC*CTSGRS
Trigger: GCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCA...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACGCTGGAAATGAGCGCTaGAACACAGGGAAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHAGNER*NTGKSR
Trigger: TCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGC...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGGCCAACCCCAGTGCTTaGCACTGCTTGTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWANPSA*HCLFGD
Trigger: GTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGC...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAGCCCAGGATGGCCTaGTCAATGGTGATGAGCTCA +
Preference number: 4 (lower is better)
Translates to: KGGEGARPAWLWGQRCVEEPRMA*SMVMSS
Trigger: TGAGCTCATCACCATTGACCAGGCCATCCTGGGCTC...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGAGCCCAGGATGGCCTaGTCAATGGTGATGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQEPRMA*SMVMSS
Trigger: TGAGCTCATCACCATTGACCAGGCCATCCTGGGCTC...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462991.5
CDS-3UTR CCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGCGCGGCTGAAGGCCTaGATGTCATTGTGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGARLKA*MSLCGF
Trigger: GAACCCGCACAATGACATCCAGGCCTTCAGCCGCGC...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCATCACCTTCTTGTTCTaGCCGATGCGGTGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: LSLFSCLRDCRRPLCPSGITFLF*PMRWAR
Trigger: CCGCGCCCACCGCATCGGCCAGAACAAGAAGGTGAT...GCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CCA 90 bp GTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTTCATCCTGCCACTCCTaGTCCTCCTGGGAGGCATCG +
Preference number: 4 (lower is better)
Translates to: VTLQLPPGLSSSTLPFRPSSCHS*SSWEAS
Trigger: CGATGCCTCCCAGGAGGACCAGGAGTGGCAGGATGA...AGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTGCGGCTGGAAGGGCCTaGACTTCCAGGGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGAAGRA*TSRGCL
Trigger: AAGGCAGCCCCTGGAAGTCCAGGCCCTTCCAGCCGC...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGCTTCTCCGTCTCCTCTaGCCGCTCCTCTCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWLLRLL*PLLSGS
Trigger: AGAGCCCGAGAGGAGCGGCCAGAGGAGACGGAGAAG...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACAGCCTTGGTGTCATCTaGCCTGAGTTCGGAACTGTC +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHSLGVI*PEFGTV
Trigger: GACAGTTCCGAACTCAGGCCAGATGACACCAAGGCT...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATCGCCCTGCTGGATGGTaGGGTCCCCGGCGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDRPAGW*GPRRGW
Trigger: CCAACCGCGCCGGGGACCCCACCATCCAGCAGGGCG...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCCTTTTCTCTCCCATGTaGGTCGGGCAGGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SLSLFSCLRDCRRPLCPSLFSPM*VGQVAR
Trigger: CCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAG...GGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTATGAGGTGGCACTTCTaGGCTCTGGCCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSMRWHF*ALAQLS
Trigger: GCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCAT...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGCCGTCCGGCGTGGTTGTaGGGGCAACGCTGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: DWHFGLAFMPEDPDSTSSRPAWL*GQRCVE
Trigger: TTCCACACAGCGTTGCCCCCACAACCACGCCGGACG...GCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATCGTCCGGCGTGGTTGTaGGGGCAACGCTGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNRPAWL*GQRCVE
Trigger: TTCCACACAGCGTTGCCCCCACAACCACGCCGGACG...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGCATGACCCTCCTTGCTaGGGCGCAGCTATCACTGCC +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGHDPPC*GAAITA
Trigger: GGCAGTGATAGCTGCGCCCCAGCAAGGAGGGTCATG...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TGTCCCCTGCCCACAGACCCTGACGCACACTGGAGGCTCCAAGTGACCGACACTCCTTCCAGGTCGACCTaGGGCCAGGAGAAGGATCAC +
Preference number: 4 (lower is better)
Translates to: CPLPTDPDAHWRLQVTDTPSRST*GQEKDH
Trigger: GTGATCCTTCTCCTGGCCCCAGGTCGACCTGGAAGG...AGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCAGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGCCATCAGCCCTTGGGGTaGAGACACAGACCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: DWHFGLAFMPEDPDSTSSHQPLG*RHRPLP
Trigger: GGGCAGGGGTCTGTGTCTCCACCCCAAGGGCTGATG...GCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CCTCCAGGCAGAACTCTCCCCACGCCTTCCAAGAGTGCAGCCTCAGGCAAAAAGAGGAGAAGGGAGCCCTaGCGAGGCCTGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PPGRTLPTPSKSAASGKKRRREP*RGLGGK
Trigger: CTTCCCTCCCAGGCCTCGCCAGGGCTCCCTTCTCCT...CTTTTTGCCTGAGGCTGCACTCTTGGAAGGCGTGGGGAGAGTTCTGCCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTCAGCACCACCCCTTCTaGACCAGGCAGTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGQHHPF*TRQCRG
Trigger: CCCCCTGCACTGCCTGGTCCAGAAGGGGTGGTGCTG...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CTTTCACGGGGGACGCTGCTTCTGCCTCAGGCGTGTATGAGAGGGCCCTGCAGAAGGAGCTTCGGAAGGTaGCTTTCACGGGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: LSRGTLLLPQACMRGPCRRSFGR*LSRGTL
Trigger: CAGCGTCCCCCGTGAAAGCCACCTTCCGAAGCTCCT...TCTGCAGGGCCCTCTCATACACGCCTGAGGCAGAAGCAGCGTCCCCCGTGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCTGGCTGGGACTCCTaGCGCGCCTTGCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLAPGWDS*RALHPA
Trigger: GGCTGGGTGCAAGGCGCGCCAGGAGTCCCAGCCAGG...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 72 bp ACTACGCCCACGTGCAGTGTCAGGGTCGGGCTGGCCTaGCAGACCTGGATCCAGACTGGAGTGTGGGAATGC +
Preference number: 4 (lower is better)
Translates to: TTPTCSVRVGLA*QTWIQTGVWEC
Trigger: GCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAAGGCCAGCCCGACCCTGACACTGCACGTGGGCGTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGCTGCTTGTCGAACTTaGCCGTGGGGTCCACAATGG +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGAACRT*PWGPQW
Trigger: CCATTGTGGACCCCACGGTCAAGTTCGACAAGCAGC...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp GCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTGTCCCCCGTGTAGGTaGCCACGTAGAAGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: AGARCRRFSQRIQQPAPRCPPCR*PRRSRA
Trigger: CGCCCGACTTCTACGTGGTCACCTACACGGGGGACA...ACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp CCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGATGGTGGCTCCACCCGGACAATaGGCTCGGTCTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PKLLLYIWEEPKAPCWMVAPPGQ*ARSWPA
Trigger: TGCCGGCCAAGACCGAGCTCATTGTCCGGGTGGAGC...CACCATCCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR TCA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCGCTTCCCTGAAGACTTaGCCAGGGAGCTTCCATCGT +
Preference number: 4 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPASLKT*PGSFHR
Trigger: ACGATGGAAGCTCCCTGGTCAAGTCTTCAGGGAAGC...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp AGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATGCTTCCCTGAAGACTTaGCCAGGGAGCTTCCATCGT +
Preference number: 4 (lower is better)
Translates to: RYLLDGGVPGAVGQAAQDASLKT*PGSFHR
Trigger: ACGATGGAAGCTCCCTGGTCAAGTCTTCAGGGAAGC...ATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462991.5
CDS-3UTR TCA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCTCATCTGGGAGAAGATaGGCACACGGTGCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPSSGRR*AHGAPH
Trigger: ATGAGGGGCACCGTGTGCTCATCTTCTCCCAGATGA...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp GTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTCGTACTGCGCCACCTTaGAGGAGCTCAGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: VTLQLPPGLSSSTLPFRPRTAPP*RSSGTR
Trigger: ACGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACG...AGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR TCA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCGCGTGTGCAACTCCGTaGAGCCCCCGTCCGCGATGT +
Preference number: 4 (lower is better)
Translates to: EISNRRLALWARVHARGPACATP*SPRPRC
Trigger: ACATCGCGGACGGGGGCTTCACGGAGTTGCACACGC...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCGCATCTGGTTGTAGTTaGCAATCCCTCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPASGCS*QSLPVQ
Trigger: CTGGACCGGGAGGGATTGTCAACTACAACCAGATGC...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCTCCCCAGCTGGGCTaGGTCCACAGGGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLAPPQLG*VHRAVP
Trigger: TGGCACTGCCCTGTGGACTCAGCCCAGCTGGGGAGG...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGCCTCAGGCGTGTATaGGAGGGCCCTGCAGACGTG +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGCLRRV*EGPADV
Trigger: CACGTCTGCAGGGCCCTCTCATACACGCCTGAGGCA...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TGTTGGCTACAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGTCACTCCAGGCCCTTTaGCCTCCTTGGTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: CWLQPLSSLPWAKTRQATSLQAL*PPWSWP
Trigger: AGGCCAAGACCAAGGAGGGCAAAGGGCCTGGAGTGA...CGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTGTAGCCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACTCCGGCGGCTTCTCCTaGTTGTCGTCCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSPSGFWLPCTRAHSPLHSGGFS*LSSLSF
Trigger: GAAGCTGAGGGACGACAAGCAGGAGAAGCCGCCGGA...GTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATGGTACGGGTGCAGTGTaGCGCCTGTGGAGTCGATGT +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNGTGAV*RLWSRC
Trigger: ACATCGACTCCACAGGCGGCACACTGCACCCGTACC...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGTCCAGCTGGTACGGGTaGAGTGTGCCGCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LGPKLLLYIWEEPKAPCWSSWYG*SVPPVE
Trigger: CTCCACAGGCGGCACACTGCACCCGTACCAGCTGGA...CCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp ATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCCTTGGTGCTGCGGCTATGTCGTCCAGCTCCTaGTTGGTCATGGACCCCGAC +
Preference number: 4 (lower is better)
Translates to: MSGRSWQETRQQALGAAAMSSSS*LVMDPD
Trigger: GTCGGGGTCCATGACCAAGCAGGAGCTGGACGACAT...AGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGCGGGGTGCTACCGTaGTTCTTCTTTGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWGGVLP*FFFALA
Trigger: CGCCAGTGCAAAGAAGAAGCACGGTAGCACCCCGCC...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CTTGTCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCGGCGGGGTGCTACCGTaGTTCTTCTTTGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: LVPVTLQLPPGLSSSTLPGGVLP*FFFALA
Trigger: CGCCAGTGCAAAGAAGAAGCACGGTAGCACCCCGCC...GGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR GCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTTGTCGTCGTCCACTCTaGCCTTCCGGCCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSCRRPL*PSGLSS
Trigger: TGAAGAGAGGCCGGAAGGGCAGAGTGGACGACGACA...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTTGTCGTCGTCCACTCTaGCCTTCCGGCCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VTLQLPPGLSSSTLPFRPCRRPL*PSGLSS
Trigger: TGAAGAGAGGCCGGAAGGGCAGAGTGGACGACGACA...AGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR GCA 90 bp CTCTCCTTGCTGGCTGGGCTCTCGTGCTTGTCCTCACTCTCCACTCTATCCAAGGTCTGCGAAGGTCTCTaGACCATCCGCCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LSLLAGLSCLSSLSTLSKVCEGL*TIRPRL
Trigger: GAGCCGGGGGCGGATGGTGCAGAGACCTTCGCAGAC...CTTGGATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR GCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGCTGCCTTGGCTTCTGTaGCCCGGGGTCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGLPWLL*PGVFLI
Trigger: GATGAGAAAGACCCCGGGGCACAGAAGCCAAGGCAG...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTCTCGGGCTCTCTCCTTaGTGGCTGGGCTCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: AGARCRRFSQRIQQPAPRLGLSP*WLGSRA
Trigger: AGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAG...ACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGCTCGGGCTCTCTCCTTaGTGGCTGGGCTCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWLGLSP*WLGSRA
Trigger: AGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAG...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGTGGTTCAGGACCTTGTaGAGGACGGCATTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGWFRTL*RTALAG
Trigger: GCCTGCCAATGCCGTCCTGCACAAGGTCCTGAACCA...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGCTGCGCTCCGACATCTaGAGCCGGGCGGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPLRSDI*SRAATG
Trigger: CCCGGTGGCCGCCCGGCTGCAGATGTCGGAGCGCAG...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp GACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGCCCCAGTGCTTGCCACTaGTTGTTTGGGGACGAGGGC +
Preference number: 4 (lower is better)
Translates to: DWHFGLAFMPEDPDSTSSPSACH*LFGDEG
Trigger: GCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGG...GCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp ATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCCTTGGTGCTGCGGCTTGCTCGGGACCTATCTaGTGTGGGCCAAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: MSGRSWQETRQQALGAAACSGPI*CGPRKV
Trigger: CACCTTCCTTGGCCCACAGCAGATAGGTCCCGAGCA...AGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCGGAGACACAGACCCCTaGCCTGACCGCCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: EISNRRLALWARVHARGPGDTDP*PDRHRP
Trigger: AGGCCTGTGGCGGTCAGGGCAGGGGTCTGTGTCTCC...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGCGCACGGAGGCACTGTaGATGCTGGCGCTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: LGPKLLLYIWEEPKAPCWRTEAL*MLALSK
Trigger: CTTCGACAGCGCCAGCATCCACAGTGCCTCCGTGCG...CCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGACTTTGCCCTTCAGTaGGGGGCAAGTACAGCGCGG +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWDFALQ*GASTAR
Trigger: CCGCGCTGTACTTGCCCCCCACTGAAGGGCAAAGTC...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATGCGCGGCTGAAGGCCTaGATGTCATTGTGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNARLKA*MSLCGF
Trigger: GAACCCGCACAATGACATCCAGGCCTTCAGCCGCGC...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGCCCCCTTTGGAGGACTaGACATCAGGGATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGPPLED*TSGMGV
Trigger: CACACCCATCCCTGATGTCCAGTCCTCCAAAGGGGG...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTGTCCTTGTTGTCACCTaGCGGGGTGCTACCGTGCTT +
Preference number: 4 (lower is better)
Translates to: VTLQLPPGLSSSTLPFRPVLVVT*RGATVL
Trigger: AAGCACGGTAGCACCCCGCCAGGTGACAACAAGGAC...AGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CCA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTGGAGGTGGGCAGGGCTaGCGGGCACTGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLAGGGQG*RALVCW
Trigger: CCAACACACCAGTGCCCGCCAGCCCTGCCCACCTCC...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGAGCCTTGGTGTCATCTaGCCTGAGTTCGGAACTGTC +
Preference number: 4 (lower is better)
Translates to: QPLSSLPWAKTRQATAHRSLGVI*PEFGTV
Trigger: GACAGTTCCGAACTCAGGCCAGATGACACCAAGGCT...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGGGATGCGGGACAGCATaGATGGCAGCCGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWGCGTA*MAAGSR
Trigger: ACGTGACCCGGCTGCCATCCATGCTGTCCCGCATCC...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGAAGCGCCCTGCTGGATaGTGGGGTCCCCGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELKRPAG*WGPRRG
Trigger: ACCGCGCCGGGGACCCCACCATCCAGCAGGGCGCTT...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCCGAAAGCGCCCTGCTaGATGGTGGGGTCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELPKAPC*MVGSPA
Trigger: CGCCGGGGACCCCACCATCCAGCAGGGCGCTTTCGG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp CTTTCACGGGGGACGCTGCTTCTGCCTCAGGCGTGTATGAGAGGGCCCTGCAGACAGGGCCCCGGAAGTTaGGCCCAAAGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LSRGTLLLPQACMRGPCRQGPGS*AQSCCC
Trigger: ACAGCAACAACTTTGGGCCCAACTTCCGGGGCCCTG...TCTGCAGGGCCCTCTCATACACGCCTGAGGCAGAAGCAGCGTCCCCCGTGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGTGTGGGTCGGGCAGGTaGCCCGGCAGGCGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELCGSGR*PGRRGS
Trigger: TGAGCCACGCCTGCCGGGCCACCTGCCCGACCCACA...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATATGAGGTGGCACTTCTaGGCTCTGGCCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNMRWHF*ALAQLS
Trigger: GCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCAT...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp TCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCAGCCGTCCGGCGTGGTTGTaGGGGCAACGCTGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SGLSSELSPLLWIKLSSSRPAWL*GQRCVE
Trigger: TTCCACACAGCGTTGCCCCCACAACCACGCCGGACG...GCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTGGGGCACGTCCGGCGTaGTTGTGGGGGCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSGARPA*LWGQRC
Trigger: ACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp AGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCAAGGCAGCAAGCCCTTaGTGCTGCGGCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SDRHLTKSIWLLAPMYPSKAASP*CCGWEG
Trigger: CCCCTCCCAGCCGCAGCACCAAGGGCTTGCTGCCTT...GCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGGTGGGCCAAGGAAGGTaGGCACTGCTCCCAACGAGG +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWVGQGR*ALLPTR
Trigger: CCTCGTTGGGAGCAGTGCCCACCTTCCTTGGCCCAC...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATGGGACCTATCTGCTGTaGGCCAAGGAAGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNGTYLL*AKEGGH
Trigger: GTGCCCACCTTCCTTGGCCCACAGCAGATAGGTCCC...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGATTGACCAAGTCCATCTaGCTTCTGGCTCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRLTKSI*LLAPMY
Trigger: GTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAA...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GTTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGGCTTCCATTTTGTCTaGCCGATGCGGTGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: VGPKVVAVHLGGAESALLGFHFV*PMRWAR
Trigger: CCGCGCCCACCGCATCGGCCAGACAAAATGGAAGCC...CAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR TCA 90 bp CGAGGACGGCTAGATATCGGTCACATAGGGCCCCAGGGGCATCTGGTTGTAGTTCCCCGAAGCGGAACTTaGGCCCGGCCGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RGRLDIGHIGPQGHLVVVPRSGT*ARPSFS
Trigger: GGAAAAAGACGGCCGGGCTCAAGTTCCGCTTCGGGG...AACTACAACCAGATGCCCCTGGGGCCCTATGTGACCGATATCTAGCCGTCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR TCA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGGCCGGAGGCCCCCGGTaGTGCCACCATCAATCCGCT +
Preference number: 4 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPEAGGPR*CHHQSA
Trigger: AGCGGATTGATGGTGGCATCACCGGGGGCCTCCGGC...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGACCACCTGCCCGGGTTaGGAGGAGGAAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: LGPKLLLYIWEEPKAPCWTTCPG*EEEAEL
Trigger: CAGTTCTGCTTCCTCCTCTCAACCCGGGCAGGTGGT...CCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR TCA 90 bp GCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTGCACCACCAGGTGGGTaGGCATCATCTTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: AGARCRRFSQRIQQPAPRAPPGG*ASSCAW
Trigger: CCAAGCGCAAGATGATGCTCACCCACCTGGTGGTGC...ACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTCCTCCGTGCCGAACTTaGGGATGTCGTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCPPCRT*GCRPAP
Trigger: AGGAGCTGGACGACATCCTCAAGTTCGGCACGGAGG...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TCCCAGTACAAGACTCAGAAACGCCTTCCAGGTCGACCTGGGGCCAGGAGAAGGTCCGCTGTCGGGCATTaGAGCCCAGCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: SQYKTQKRLPGRPGARRRSAVGH*SPAPRC
Trigger: ACATCGAGGTGCTGGGCTTCAATGCCCGACAGCGGA...CCTTCTCCTGGCCCCAGGTCGACCTGGAAGGCGTTTCTGAGTCTTGTACTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTGGTGTCATCTGGCCTaGGTTCGGAACTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNWCHLA*VRNCPL
Trigger: GAGGGGACAGTTCCGAACTCAGGCCAGATGACACCA...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATCTCCCTCCACACCCCTaGACTCAGACCCCACGGGCC +
Preference number: 4 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDLPPHP*TQTPRA
Trigger: GGCCCGTGGGGTCTGAGTTCAGGGGTGTGGAGGGAG...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CCAAAGACGCCAAACATACGGACACCACCATCACCACTTTTGGCAGAGATGACTCGCCGCCGCCGCTGCTaGCGCGGAGCTGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PKTPNIRTPPSPLLAEMTRRRRC*RGAALE
Trigger: TTCAAGGGCAGCTCCGCGGCAGCAGCGGCGGCGGCG...AGTCATCTCTGCCAAAAGTGGTGATGGTGGTGTCCGTATGTTTGGCGTCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGATGGTGGGGTCCTCTTGCGCCTCCTCTTaGTCTTCTTGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLLYIWEEPKAPCWMVGSSCASS*SSCPGL
Trigger: CAGCCCTGGGCAAGAAGAGCAAGAGGAGGCGCAAGA...GGACCCCACCATCCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTCCGGCGGCTTCTCCTaGTTGTCGTCCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGSGGFS*LSSLSF
Trigger: GAAGCTGAGGGACGACAAGCAGGAGAAGCCGCCGGA...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTAAGATGAGCACACGGTaGCCCTCATCCCGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSKMSTR*PSSRSF
Trigger: GAAACTGCGGGATGAGGGGCACCGTGTGCTCATCTT...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTTGTCACCTGGCGGGGTaGTACCGTGCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSCHLAG*YRASSL
Trigger: CAAAGAAGAAGCACGGTAGCACCCCGCCAGGTGACA...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp ATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCCTTGGTGCTGCGGCTCTGTCACTCTTCAGCTaGCTCCGGGATTGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: MSGRSWQETRQQALGAAALSLFS*LRDCRR
Trigger: ACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG...AGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp ACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTCTCCTGTCACTCTTCAGCTaGCTCCGGGATTGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: TLQLPPGLSSSTLPFRPLLSLFS*LRDCRR
Trigger: ACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG...GAGAGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR GCA 90 bp CCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACCCAGCACCTCGATGTTaGCACCAACTCGGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: PSPSGFWLPCTRAHSPLHPAPRC*HQLGRE
Trigger: TTCTCGCCCGAGTTGGTGGCAACATCGAGGTGCTGG...GTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATCTGGCTGGGCTCTCGTaGTTGTCCTCACTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNLAGLS*LSSLST
Trigger: AGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAG...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGGAACTGTCCCCTCTaGTGTGGATCAAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSRNCPL*CGSSSA
Trigger: AGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCG...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCAGCTTCTGCCACAGCGTGTaGAACTCCGTGAAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SGLSSELSPLLWIKLSSSFCHSV*NSVKPP
Trigger: CGGGGGCTTCACGGAGTTGCACACGCTGTGGCAGAA...GCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTTTCTGCCACAGCGTGTaGAACTCCGTGAAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCFCHSV*NSVKPP
Trigger: CGGGGGCTTCACGGAGTTGCACACGCTGTGGCAGAA...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAATCATCTCCAGGTAGTTaGCCTTGTGGACCTCAGACT +
Preference number: 4 (lower is better)
Translates to: KGGEGARPAWLWGQRCVESSPGS*PCGPQT
Trigger: AGTCTGAGGTCCACAAGGGCAACTACCTGGAGATGA...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTCAGGCGGCTCAGGATaGTGCGCTCCGACATCTGCA +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWSGGSG*CAPTSA
Trigger: TGCAGATGTCGGAGCGCAGCATCCTGAGCCGCCTGA...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTGGCCTCCAGTCCTGCTaGTCGGGACCTATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGGLQSC*SGPICC
Trigger: ACAGCAGATAGGTCCCGAGCAGCAGGACTGGAGGCC...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TCCCAGTACAAGACTCAGAAACGCCTTCCAGGTCGACCTGGGGCCAGGAGAAGGACAGGCCTCCAGTCCTaGTGCTCGGGACCTATCTGC +
Preference number: 4 (lower is better)
Translates to: SQYKTQKRLPGRPGARRRTGLQS*CSGPIC
Trigger: GCAGATAGGTCCCGAGCAGCAGGACTGGAGGCCTGT...CCTTCTCCTGGCCCCAGGTCGACCTGGAAGGCGTTTCTGAGTCTTGTACTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGCAGGCACTGTGGATGCTaGCGCTGTCGAAGTCCGACT +
Preference number: 4 (lower is better)
Translates to: DWHFGLAFMPEDPDSTSSRHCGC*RCRSPT
Trigger: AGTCGGACTTCGACAGCGCCAGCATCCACAGTGCCT...GCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATGCAGTGTGCCGCCTGTaGAGTCGATGTACCATGGCT +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNAVCRL*SRCTMA
Trigger: AGCCATGGTACATCGACTCCACAGGCGGCACACTGC...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCTCTTCCCACTCCGAATaGCGTTGTCCTCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLSSHSE*RCPQRK
Trigger: TTTCCTTTGAGGACAACGCCATTCGGAGTGGGAAGA...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTGGCAGGCCCACTCGATaGAGCCCAGGATGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLAGRPTR*SPGWPG
Trigger: ACCAGGCCATCCTGGGCTCCATCGAGTGGGCCTGCC...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATTACTTCTTCTGCATCTaGCTCAGCTCCACCCGGACA +
Preference number: 4 (lower is better)
Translates to: RYLLDGGVPGAVGQAAQDYFFCI*LSSTRT
Trigger: TGTCCGGGTGGAGCTGAGCCAGATGCAGAAGAAGTA...ATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462991.5
CDS-3UTR CCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTATCACCTTCTTGTTCTaGCCGATGCGGTGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCITFLF*PMRWAR
Trigger: CCGCGCCCACCGCATCGGCCAGAACAAGAAGGTGAT...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGTCATGGACCCCGACTTaGAGCCGAGGCCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELSWTPT*SRGRAA
Trigger: TGCGGCCCGGCCTCGGCTCCAAGTCGGGGTCCATGA...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp ACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTCTCCCAGCAGCTTGGAGATaGCCGCATCGTCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: TLQLPPGLSSSTLPFRPLPAAWR*PHRHSG
Trigger: TCCACTATGACGATGCGGCCATCTCCAAGCTGCTGG...GAGAGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CCA 90 bp CTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCTCATCTGTAGCGTCCTaGTTCCGGTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LSLFSCLRDCRRPLCPSGSSVAS*FRSSSL
Trigger: CAAGCTGCTGGACCGGAACCAGGACGCTACAGATGA...GCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTATCATCCTGCCACTCCTaGTCCTCCTGGGAGGCATCG +
Preference number: 4 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLSSCHS*SSWEAS
Trigger: CGATGCCTCCCAGGAGGACCAGGAGTGGCAGGATGA...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCGGGCACTGGTGTGTTaGGGTCCGAGGAGATCACCT +
Preference number: 4 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPRALVC*GPRRSP
Trigger: AGGTGATCTCCTCGGACCCCAACACACCAGTGCCCG...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCGGCTTCCATTTTGTCTaGCAGGCCCAGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EISNRRLALWARVHARGPGFHFV*QAQRGW
Trigger: CCAGCCCCGCTGGGCCTGCCAGACAAAATGGAAGCC...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TTGCAGACCTGGATCCAGACTGGAGTGTGGGAATGCGCCAAGAGGAAGGACTTGGCGGCTGGAAGGGCCTaGACTTCCAGGGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LQTWIQTGVWECAKRKDLAAGRA*TSRGCL
Trigger: AAGGCAGCCCCTGGAAGTCCAGGCCCTTCCAGCCGC...CAAGTCCTTCCTCTTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TTGGTGTCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCGCGGCTGGAAGGGCCTaGACTTCCAGGGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LVSSGLSSELSPLLWIKLAAGRA*TSRGCL
Trigger: AAGGCAGCCCCTGGAAGTCCAGGCCCTTCCAGCCGC...GAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGACACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCCTGTCCCCTCTGCTGTaGATCAAGCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLSLFSCLRDCRRPLCPSLSPLL*IKLSSS
Trigger: GCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAG...GGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGAGGATCATGTACCGTaGGTCATTCTGGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQEDHVP*VILDVL
Trigger: CAGGACATCCAGAATGACCCACGGTACATGATCCTC...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGCCATGGCGGGGTGGTTaGGGTCCTGCGTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWPWRGG*GPASCS
Trigger: TGAACATGACGCAGGACCCCAACCACCCCGCCATGG...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTATGAGGTGGCACTTCTaGGCTCTGGCCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGMRWHF*ALAQLS
Trigger: GCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCAT...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp ATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCCTTGGTGCTGCGGCTGTGCCAGGACTACCTTaGGTCTGGAACCCATCGGTA +
Preference number: 4 (lower is better)
Translates to: MSGRSWQETRQQALGAAAVPGLP*VWNPSV
Trigger: TACCGATGGGTTCCAGACCCAAGGTAGTCCTGGCAC...AGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCCCAGGGACAGGGGAATaGGACAAGTCCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: EISNRRLALWARVHARGPPGTGE*DKSRPP
Trigger: TGGGGGCCTGGACTTGTCCCATTCCCCTGTCCCTGG...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCCTTGGTGCTGCGGCTaGGAGGGGTCTGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELPWCCG*EGSAEG
Trigger: GCCCTCTGCAGACCCCTCCCAGCCGCAGCACCAAGG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGTTTCCAATCGCAGACTaGCACTTTGGGCTCGCGTTC +
Preference number: 4 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWFPIAD*HFGLAF
Trigger: GAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAA...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGAGTCCATCTGGCTTCTaGCTCCCATGTACCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWSPSGF*LPCTRA
Trigger: GGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACT...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACCTGGCTTCCAAAGCTaGACCCGCCCCCGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVAPGFQS*TRPRRG
Trigger: GCCCCGGCGGGGGCGGGTCCAGCTTTGGAAGCCAGG...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 72 bp CTTCCTCTCCAGGGGTGCTTGGGCTCCAATCGCTGCTaGAGGAGTTCAGGACACACACACACACCCAACGGG +
Preference number: 4 (lower is better)
Translates to: LPLQGCLGSNRC*RSSGHTHTPNG
Trigger: CCCGTTGGGTGTGTGTGTGTGTCCTGAACTCCTCAAGCAGCGATTGGAGCCCAAGCACCCCTGGAGAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGCAGGTCTTTCCACTTaGTCAGGTAGTGCACATCCC +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGAGLST*SGSAHP
Trigger: GGGATGTGCACTACCTGATCAAGTGGAAAGACCTGC...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGCTGCTTGTCGAACTTaGCCGTGGGGTCCACAATGG +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCAACRT*PWGPQW
Trigger: CCATTGTGGACCCCACGGTCAAGTTCGACAAGCAGC...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGGCTGCTTGTCGAACTTaGCCGTGGGGTCCACAATGG +
Preference number: 4 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPAACRT*PWGPQW
Trigger: CCATTGTGGACCCCACGGTCAAGTTCGACAAGCAGC...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGCAGCATGAGCTTCCCTaGAGACTTGACCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWQHELP*RLDQGA
Trigger: AGCTCCCTGGTCAAGTCTTCAGGGAAGCTCATGCTG...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp ACGTCGTCCTTGAAGAGTTCCTCCGTGCCGAACTTGAGGATGTCGTCCAGCTCCCCTCCGTGCCGAACTTaGGGATGTCGTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TSSLKSSSVPNLRMSSSSPPCRT*GCRPAP
Trigger: AGGAGCTGGACGACATCCTCAAGTTCGGCACGGAGG...GGAGCTGGACGACATCCTCAAGTTCGGCACGGAGGAACTCTTCAAGGACGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR TCA 90 bp GTCTCCTCTGGCCGCTCCTCTCGGGCTCTCTCCTTGCTGGCTGGGCTCTCGTGCGCCAATGGAATATTCTaGCTGGTTATCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: VSSGRSSRALSLLAGLSCANGIF*LVIREL
Trigger: GAGCTCTCTGATAACCAGTCAGAATATTCCATTGGC...GCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR TCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGTGGCTCAGCTGGAAATaGGCGCTGCAACACAGGGAA +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWWLSWK*ALQHRE
Trigger: TTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCA...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR TCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAGTGTGGAAGAACACTTaGATTATGATGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRVWKNT*IMMRWH
Trigger: GTGCCACCTCATCATAATTCAAGTGTTCTTCCACAC...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR TCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACGTGTGGAAGAACACTTaGATTATGATGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHVWKNT*IMMRWH
Trigger: GTGCCACCTCATCATAATTCAAGTGTTCTTCCACAC...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGTCACTCCAGGCCCTTTaGCCTCCTTGGTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPSLQAL*PPWSWP
Trigger: AGGCCAAGACCAAGGAGGGCAAAGGGCCTGGAGTGA...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTCTTGCGCCTCCTCTTaGTCTTCTTGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGSCASS*SSCPGL
Trigger: CAGCCCTGGGCAAGAAGAGCAAGAGGAGGCGCAAGA...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTACATCGATCTCCCAGGTaGACTGGTCGTAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLHRSPR*TGRRAG
Trigger: ACCTGCCCTACGACCAGTGCACCTGGGAGATCGATG...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGGTCTGCACCGTCTTaGCCAGACCCATCTCATCGG +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGWSAPS*PDPSHR
Trigger: CCGATGAGATGGGTCTGGGCAAGACGGTGCAGACCA...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGTGGTCTGCACCGTCTTaGCCAGACCCATCTCATCGG +
Preference number: 4 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPWSAPS*PDPSHR
Trigger: CCGATGAGATGGGTCTGGGCAAGACGGTGCAGACCA...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GTTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGTGGTCTGCACCGTCTTaGCCAGACCCATCTCATCGG +
Preference number: 4 (lower is better)
Translates to: VGPKVVAVHLGGAESALLWSAPS*PDPSHR
Trigger: CCGATGAGATGGGTCTGGGCAAGACGGTGCAGACCA...CAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGAGGAACACGATGGTCTaGACCGTCTTGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPRNTMV*TVLPRP
Trigger: GGGTCTGGGCAAGACGGTGCAGACCATCGTGTTCCT...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAATTGAATCTGTCGATTaGCTCCTGCCGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QTGTLGSRSCPRTLILPAIESVD*LLPEAP
Trigger: GGGGGCCTCCGGCAGGAGGCAATCGACAGATTCAAT...TGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCAGCATTGAATCTGTCGATTaGCTCCTGCCGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SGLSSELSPLLWIKLSSSIESVD*LLPEAP
Trigger: GGGGGCCTCCGGCAGGAGGCAATCGACAGATTCAAT...GCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTATGTCGTCCAGCTCCTaGTTGGTCATGGACCCCGAC +
Preference number: 4 (lower is better)
Translates to: AGARCRRFSQRIQQPAPRMSSSS*LVMDPD
Trigger: GTCGGGGTCCATGACCAAGCAGGAGCTGGACGACAT...ACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CTTGTCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTGTCACCTGGCGGGGTaGTACCGTGCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LVPVTLQLPPGLSSSTLPCHLAG*YRASSL
Trigger: CAAAGAAGAAGCACGGTAGCACCCCGCCAGGTGACA...GGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR GCA 90 bp CTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCTCCACGTTCTCCTCCTaGTTGATGATTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LSLFSCLRDCRRPLCPSGSTFSS*LMISRS
Trigger: GGAGCGGGAAATCATCAAGCAGGAGGAGAACGTGGA...GCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR GCA 90 bp CAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCATGTCGTCGTCCACTCTaGCCTTCCGGCCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QTGTLGSRSCPRTLILPACRRPL*PSGLSS
Trigger: TGAAGAGAGGCCGGAAGGGCAGAGTGGACGACGACA...TGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATATGCGGGTCAGCACGTaGTGCCTGGAGAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDMRVST*CLERPS
Trigger: GGAGGGCCTCTCCAGGCAGCACGTGCTGACCCGCAT...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGGCGGCCCTCCGGAGCTaGTCCTCAATGACCAACGCC +
Preference number: 4 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPEAALRS*SSMTNA
Trigger: GGCGTTGGTCATTGAGGAGCAGCTCCGGAGGGCCGC...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGTGGTTCAGGACCTTGTaGAGGACGGCATTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPWFRTL*RTALAG
Trigger: GCCTGCCAATGCCGTCCTGCACAAGGTCCTGAACCA...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTGGTTCAGGACCTTGTaGAGGACGGCATTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGARCRRFSQRIQQPAPRWFRTL*RTALAG
Trigger: GCCTGCCAATGCCGTCCTGCACAAGGTCCTGAACCA...ACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGGCGGCTCCCCAAACCTaGCCTGTCTGGTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELAAPQT*PVWCWE
Trigger: CTCCCAGCACCAGACAGGGCAGGTTTGGGGAGCCGC...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGCTGCCCCGAGGACTTaGGCTCCTTTAAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWAAPRT*APLSIH
Trigger: ATGGATGCTTAAAGGAGCCCAAGTCCTCGGGGCAGC...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCCGTGGGGTCCACAATaGGCGTGTCCGGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELPWGPQ*ACPAAS
Trigger: AGAAGCCGCCGGACACGCCCATTGTGGACCCCACGG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTCCAGGTAGGGCCCTTTaGAGTGGCCCTCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGPGRAL*SGPPCR
Trigger: TCTACAAGGAGGGCCACTCCAAAGGGCCCTACCTGG...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAATGCAGCTTCTTGATCTaGTCTTCCTTGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: GGEGARPAWLWGQRCVEECSFLI*SSLEMS
Trigger: TGACATCTCCAAGGAAGACCAGATCAAGAAGCTGCA...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCATCGTAGGAGCCATTaGGCAAGACAGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPHRRSH*ARQGPP
Trigger: TGGAGGCCCCTGTCTTGCCCAATGGCTCCTACGATG...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TTGGCTTCTGTGCCCCGGGGTCTTTCTCATCCATGTAGCCCAGCTGGGCTTCCAAGGAAGCAGAACTGCTaGGCCCCGGGGGCATTGAAT +
Preference number: 4 (lower is better)
Translates to: LASVPRGLSHPCSPAGLPRKQNC*APGALN
Trigger: ATTCAATGCCCCCGGGGCCCAGCAGTTCTGCTTCCT...TGGAAGCCCAGCTGGGCTACATGGATGAGAAAGACCCCGGGGCACAGAAGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGAGGAAGCAGAACTGCTaGGCCCCGGGGGCATTGAAT +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWRKQNC*APGALN
Trigger: ATTCAATGCCCCCGGGGCCCAGCAGTTCTGCTTCCT...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTGTCCTTGTTGTCACCTaGCGGGGTGCTACCGTGCTT +
Preference number: 4 (lower is better)
Translates to: AGARCRRFSQRIQQPAPRVLVVT*RGATVL
Trigger: AAGCACGGTAGCACCCCGCCAGGTGACAACAAGGAC...ACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGCTCAGGGATCAAGTCTaGGGTGCTGTACTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGLRDQV*GAVLPV
Trigger: AACGGGAAGTACAGCACCCCAGACTTGATCCCTGAG...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TTGGTGTCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCGGCTTCCATTTTGTCTaGCAGGCCCAGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LVSSGLSSELSPLLWIKLGFHFV*QAQRGW
Trigger: CCAGCCCCGCTGGGCCTGCCAGACAAAATGGAAGCC...GAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGACACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CGAGGACGGCTAGATATCGGTCACATAGGGCCCCAGGGGCATCTGGTTGTAGTTCCATGGCGGGGTGGTTaGGGTCCTGCGTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: RGRLDIGHIGPQGHLVVVPWRGG*GPASCS
Trigger: TGAACATGACGCAGGACCCCAACCACCCCGCCATGG...AACTACAACCAGATGCCCCTGGGGCCCTATGTGACCGATATCTAGCCGTCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGGTCCCAAGGTGGCGCTaGCTCCTAAAAAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWVPRWR*LLKRWQ
Trigger: CTGCCACCTTTTTAGGAGCCAGCGCCACCTTGGGAC...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp GCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTGTCCCAAGGTGGCGCTaGCTCCTAAAAAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGARCRRFSQRIQQPAPRVPRWR*LLKRWQ
Trigger: CTGCCACCTTTTTAGGAGCCAGCGCCACCTTGGGAC...ACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTCGTCCGGCGTGGTTGTaGGGGCAACGCTGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSRPAWL*GQRCVE
Trigger: TTCCACACAGCGTTGCCCCCACAACCACGCCGGACG...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCGAGAGAGCAAACACCTaGCGGCCTCCAGCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: EISNRRLALWARVHARGPERANT*RPPALA
Trigger: TGCCAAGGCTGGAGGCCGCCAGGTGTTTGCTCTCTC...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGTCTCCGTCCCCAACTTaGAGGGGCAGGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: EEHLNYDEVALLGSGPAESPSPT*RGRVRG
Trigger: CCCCCGGACCCTGCCCCTCCAAGTTGGGGACGGAGA...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCACCGGGCCAAGGCTTaGTCAGCTCCTGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELHRAKA*SAPDLG
Trigger: GCCGAGGTCAGGAGCTGACCAAGCCTTGGCCCGGTG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTTCAGGAAGCTGAGGTaGGAGGGTCGCTTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: AGARCRRFSQRIQQPAPRFRKLR*EGRLSR
Trigger: TCGGCTCAAGCGACCCTCCCACCTCAGCTTCCTGAA...ACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462991.5
CDS-3UTR TCA 90 bp CCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGATGGTGCCCAGTAGGCCTGCTTaGGGTTGTCGTAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: PKLLLYIWEEPKAPCWMVPSRPA*GCRSRG
Trigger: TCCCCTACTACGACAACCTCAAGCAGGCCTACTGGG...CACCATCCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR TCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGCAGCACGTGGAATTTaGTCTGCACTTCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQAARGI*SALLSS
Trigger: TGAAGAAAGAAGTGCAGATCAAATTCCACGTGCTGC...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462991.5
CDS-3UTR TCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTTCATCTGGGAGAAGATaGGCACACGGTGCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCSSGRR*AHGAPH
Trigger: ATGAGGGGCACCGTGTGCTCATCTTCTCCCAGATGA...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGGGCCCCGGGGGCATTaGATCTGTCGATTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDEGPRGH*ICRLPP
Trigger: AGGAGGCAATCGACAGATTCAATGCCCCCGGGGCCC...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGTGCGGTGGGCGCGGCTaGAGGCCTGGATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELCGGRG*RPGCHC
Trigger: ACAATGACATCCAGGCCTTCAGCCGCGCCCACCGCA...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TTGGTGTCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCGCATGCCCCAGCGCATaGTGGCGTTCAGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LVSSGLSSELSPLLWIKLACPSA*WRSERP
Trigger: AGGCCTTTCTGAACGCCATCATGCGCTGGGGCATGC...GAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGACACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTGCATCTGGTTGTAGTTaGCAATCCCTCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGASGCS*QSLPVQ
Trigger: CTGGACCGGGAGGGATTGTCAACTACAACCAGATGC...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGGAGACAGCCTCATTATaGGTGAGGCATATAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWETASL*VRHIGL
Trigger: AAGCCCTATATGCCTCACTCATAATGAGGCTGTCTC...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTCTTTCTTTGGTAGTTaGGATACATCACCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHSFFGS*DTSPCG
Trigger: ACCACACGGTGATGTATCGCAACTACCAAAGAAAGA...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp TTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGTCCTCTTCTCGCTCTTaGCGTCTTCATCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LGPKLLLYIWEEPKAPCWSSSRS*RLHPQS
Trigger: GCTCTGGGGATGAAGACGGCAAGAGCGAGAAGAGGA...CCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp TTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGATGGTGGGGTCCCCCCTTGGAGTTCAGTaGCTCAAAGTTCCGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LLLYIWEEPKAPCWMVGSPLGVQ*LKVPCE
Trigger: CTCACACGGAACTTTGAGGCACTGAACTCCAAGGGG...GGACCCCACCATCCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp CTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCATAGTGGATCACACTaGTGTCCTCCACGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LSLFSCLRDCRRPLCPSGHSGSH*CPPRPC
Trigger: ACAAGGACGTGGAGGACAGCAGTGTGATCCACTATG...GCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR GCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCTTGCGGATGCGCTTaGCCTTGCCCAGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPACGCA*PCPGCG
Trigger: CCCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGC...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGCTGTCACTCTTCAGCTaGCTCCGGGATTGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWLSLFS*LRDCRR
Trigger: ACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGATGCGGGTCAGCACGTaGTGCCTGGAGAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EEHLNYDEVALLGSGPAEMRVST*CLERPS
Trigger: GGAGGGCCTCTCCAGGCAGCACGTGCTGACCCGCAT...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCCTGGCTGGGCTCTCGTaGTTGTCCTCACTCTCCACT +
Preference number: 4 (lower is better)
Translates to: EISNRRLALWARVHARGPLAGLS*LSSLST
Trigger: AGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAG...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCCGGGGACAGACACCTaGTGGCAGAGGATCCACCTC +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELPGTDT*WQRIHL
Trigger: GAGGTGGATCCTCTGCCAGCAGGTGTCTGTCCCCGG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCGAGGGCCAACCCCAGTaGTTGCCACTGCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: EISNRRLALWARVHARGPEGQPQ*LPLLVW
Trigger: CCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTC...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACTTGGGCTCCAATCGCTaGTTGAGGAGTTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: PSPSGFWLPCTRAHSPLHLGSNR*LRSSGH
Trigger: GTGTCCTGAACTCCTCAAGCAGCGATTGGAGCCCAA...GTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCGCACGGAGGCACTGTaGATGCTGGCGCTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELRTEAL*MLALSK
Trigger: CTTCGACAGCGCCAGCATCCACAGTGCCTCCGTGCG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp CCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGATGGTGTCCTTCGGCTCCCACTaGATCCCCTCCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: PKLLLYIWEEPKAPCWMVSFGSH*IPSFSQ
Trigger: CTGTGAGAAGGAGGGGATCCAGTGGGAGCCGAAGGA...CACCATCCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATCGATACATCACCGTGTaGTACAGCTCCAGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNRYITV*YSSSCS
Trigger: GCTACAGCTGGAGCTGTACCACACGGTGATGTATCG...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp TTGCAGACCTGGATCCAGACTGGAGTGTGGGAATGCGCCAAGAGGAAGGACTTGGCGCGGCTGAAGGCCTaGATGTCATTGTGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: LQTWIQTGVWECAKRKDLARLKA*MSLCGF
Trigger: GAACCCGCACAATGACATCCAGGCCTTCAGCCGCGC...CAAGTCCTTCCTCTTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CCAAAGACGCCAAACATACGGACACCACCATCACCACTTTTGGCAGAGATGACTTCATGGACCCCGACTTaGAGCCGAGGCCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: PKTPNIRTPPSPLLAEMTSWTPT*SRGRAA
Trigger: TGCGGCCCGGCCTCGGCTCCAAGTCGGGGTCCATGA...AGTCATCTCTGCCAAAAGTGGTGATGGTGGTGTCCGTATGTTTGGCGTCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCCAGCAGCTTGGAGATaGCCGCATCGTCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPPAAWR*PHRHSG
Trigger: TCCACTATGACGATGCGGCCATCTCCAAGCTGCTGG...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTATCATCTGTAGCGTCCTaGTTCCGGTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLSSVAS*FRSSSL
Trigger: CAAGCTGCTGGACCGGAACCAGGACGCTACAGATGA...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGGGCTTCCATTTTGTCTaGCAGGCCCAGCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPEGFHFV*QAQRGW
Trigger: CCAGCCCCGCTGGGCCTGCCAGACAAAATGGAAGCC...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTGGGCTCTCTCCTTGCTaGCTGGGCTCTCGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSGLSPC*LGSRAC
Trigger: ACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCC...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGCTTCTCCGTCTCCTCTaGCCGCTCCTCTCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPELLRLL*PLLSGS
Trigger: AGAGCCCGAGAGGAGCGGCCAGAGGAGACGGAGAAG...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTCCATGGCGGGGTGGTTaGGGTCCTGCGTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSPWRGG*GPASCS
Trigger: TGAACATGACGCAGGACCCCAACCACCCCGCCATGG...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGGATGCGGGACAGCATaGATGGCAGCCGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDEGCGTA*MAAGSR
Trigger: ACGTGACCCGGCTGCCATCCATGCTGTCCCGCATCC...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp AGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATTGGCTCCTAAAAAGGTaGCAGCTTTTCTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: RYLLDGGVPGAVGQAAQDWLLKR*QLFSPM
Trigger: CATGGGAGAGAAAAGCTGCCACCTTTTTAGGAGCCA...ATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTTTTTGTCCCAAGGTaGCGCTGGCTCCTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: LSLFSCLRDCRRPLCPSGLFVPR*RWLLKR
Trigger: CCTTTTTAGGAGCCAGCGCCACCTTGGGACAAAAAG...GCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CCA 90 bp TTGGTGTCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCATGAGGTGGCACTTCTaGGCTCTGGCCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LVSSGLSSELSPLLWIKLMRWHF*ALAQLS
Trigger: GCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCAT...GAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGACACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TTGCAGACCTGGATCCAGACTGGAGTGTGGGAATGCGCCAAGAGGAAGGACTTGAACCCAACGCAGCAGTaGCTCCGAGGCAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LQTWIQTGVWECAKRKDLNPTQQ*LRGKCC
Trigger: GCAGCACTTGCCTCGGAGCCACTGCTGCGTTGGGTT...CAAGTCCTTCCTCTTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGCCAAGGCACCTTCCCTaGGAAGGTCCCAGTACAAGA +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWPRHLP*EGPSTR
Trigger: TCTTGTACTGGGACCTTCCCAGGGAAGGTGCCTTGG...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCGGCTAGATATCTGCTaGATGGTGGGGTCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELRLDIC*MVGSPA
Trigger: CGCCGGGGACCCCACCATCCAGCAGATATCTAGCCG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
CDS-3UTR TCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGCATCTTTGGAGCCTTTaGTCTTCTTCCTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGHLWSL*SSSSLQ
Trigger: CTGGAGTGAGGAAGAAGATCAAAGGCTCCAAAGATG...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp TCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCTCATCTGGGAGAAGATaGGCACACGGTGCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSGLSSELSPLLWIKLSSSSGRR*AHGAPH
Trigger: ATGAGGGGCACCGTGTGCTCATCTTCTCCCAGATGA...GGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462991.5
CDS-3UTR TCA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGACATGCTCAAACTCCTaGACCTTCTTCCTAACTAGT +
Preference number: 4 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQTCSNS*TFFLTS
Trigger: ACTAGTTAGGAAGAAGGTTCAGGAGTTTGAGCATGT...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TTGGTGTCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCTGGTGTCATCTGGCCTaGGTTCGGAACTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LVSSGLSSELSPLLWIKLWCHLA*VRNCPL
Trigger: GAGGGGACAGTTCCGAACTCAGGCCAGATGACACCA...GAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGACACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCAGCGTGTGCAACTCCGTaGAGCCCCCGTCCGCGATGT +
Preference number: 4 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVAACATP*SPRPRC
Trigger: ACATCGCGGACGGGGGCTTCACGGAGTTGCACACGC...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTCAAGTGACCGACACTTaGCCAAGTCCATCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCQVTDT*PSPSGF
Trigger: GAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTG...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTCGGGGAGTAGTCACTaGCTTCACTCTCCGACTTCT +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWSGSSH*LHSPTS
Trigger: AGAAGTCGGAGAGTGAAGGCAGTGACTACTCCCCGA...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTCCCCTTGGAGTTCAGTaGCTCAAAGTTCCGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCPLGVQ*LKVPCE
Trigger: CTCACACGGAACTTTGAGGCACTGAACTCCAAGGGG...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTACCCCTTGGAGTTCAGTaGCTCAAAGTTCCGTGTGAG +
Preference number: 4 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLPLGVQ*LKVPCE
Trigger: CTCACACGGAACTTTGAGGCACTGAACTCCAAGGGG...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATAGAGGTAGGGGTGGTTaGAGCACTTTTTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNRGRGG*STFSGP
Trigger: TGGACCTGAAAAAGTGCTGCAACCACCCCTACCTCT...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTGTCGATTGCCTCCTaGCGGAGGCCCCCGGTGATG +
Preference number: 4 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVALSIAS*RRPPVM
Trigger: CATCACCGGGGGCCTCCGGCAGGAGGCAATCGACAG...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTATTGAATCTGTCGATTaGCTCCTGCCGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSIESVD*LLPEAP
Trigger: GGGGGCCTCCGGCAGGAGGCAATCGACAGATTCAAT...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTATCCACGTTCTCCTCCTaGTTGATGATTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLSTFSS*LMISRS
Trigger: GGAGCGGGAAATCATCAAGCAGGAGGAGAACGTGGA...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTCTGCCTTGGCTTCTGTaGCCCGGGGTCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSLPWLL*PGVFLI
Trigger: GATGAGAAAGACCCCGGGGCACAGAAGCCAAGGCAG...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCATCCTCTCTCGGCAGCTaGTCCGGGGAGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QINEISSKKSSGKGGEGASSLGS*SGEGGA
Trigger: GGCCCCGCCCTCCCCGGAGCAGCTGCCGAGAGAGGA...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGTTCTGCCACAGCGTGTaGAACTCCGTGAAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDEFCHSV*NSVKPP
Trigger: CGGGGGCTTCACGGAGTTGCACACGCTGTGGCAGAA...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCCCGCTCCTCGTTCTaGCACAGCGTGTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPARSSF*HSVCNS
Trigger: GGAGTTGCACACGCTGTGGCAGAACGAGGAGCGGGC...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGGGTGGTTGGGGTCCTaGGTCATGTTCAGGTACGCG +
Preference number: 4 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDGWLGS*VMFRYA
Trigger: CGCGTACCTGAACATGACGCAGGACCCCAACCACCC...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGTCAGGCGGCTCAGGATaGTGCGCTCCGACATCTGCA +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDESGGSG*CAPTSA
Trigger: TGCAGATGTCGGAGCGCAGCATCCTGAGCCGCCTGA...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTGCTGGAAATGAGCGCTaGAACACAGGGAAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGAGNER*NTGKSR
Trigger: TCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGC...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp AGGACAGGAACCAGCTGCCGAGGCCGAGGCGGGCCTTGCACAGAAGAGACTTGGGTAAAGAGACATCAGTaGTGCAGGTTCGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: RTGTSCRGRGGPCTEETWVKRHQ*CRFESS
Trigger: GGAAGATTCGAACCTGCAGCACTGATGTCTCTTTAC...CCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCTCGGCAGCTGGTTCCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGCCCATGACCCTCCTTaGTGGGGCGCAGCTATCACT +
Preference number: 4 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDAHDPP*WGAAIT
Trigger: AGTGATAGCTGCGCCCCAGCAAGGAGGGTCATGGGC...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGCTCAAACATGGCTCTaGAGAAGCCCTACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCAQTWL*RSPTQH
Trigger: GTGCTGAGTAGGGCTTCTGCAGAGCCATGTTTGAGC...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGAGGGAAAGTCCAGCCTaGCCCTGGGGGAAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDERESPA*PWGKPS
Trigger: ACTTGGCTTCCCCCAGGGGCAGGCTGGACTTTCCCT...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGACGGTCATCATTTTaGACATGGGGATCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWGRSSF*TWGSSG
Trigger: ACCCGAAGATCCCCATGTCCAAAATGATGACCGTCC...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGACTTTGCCCTTCAGTaGGGGGCAAGTACAGCGCGG +
Preference number: 4 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDDFALQ*GASTAR
Trigger: CCGCGCTGTACTTGCCCCCCACTGAAGGGCAAAGTC...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGCAGTGTAGAATCCGCTaGACTTTGCCCTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWQCRIR*TLPFSG
Trigger: CCCACTGAAGGGCAAAGTCCAGCGGATTCTACACTG...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATAGTAAAGGAACACGATaGTCTGCACCGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNSKGTR*SAPSCP
Trigger: TGGGCAAGACGGTGCAGACCATCGTGTTCCTTTACT...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGATGGTGGGGTCCAGTAAAGGAACACGATaGTCTGCACCGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLLYIWEEPKAPCWMVGSSKGTR*SAPSCP
Trigger: TGGGCAAGACGGTGCAGACCATCGTGTTCCTTTACT...GGACCCCACCATCCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CCA 90 bp TTGCAGACCTGGATCCAGACTGGAGTGTGGGAATGCGCCAAGAGGAAGGACTTGAGGAAGCAGAACTGCTaGGCCCCGGGGGCATTGAAT +
Preference number: 4 (lower is better)
Translates to: LQTWIQTGVWECAKRKDLRKQNC*APGALN
Trigger: ATTCAATGCCCCCGGGGCCCAGCAGTTCTGCTTCCT...CAAGTCCTTCCTCTTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTGTCCTTGTTGTCACCTaGCGGGGTGCTACCGTGCTT +
Preference number: 4 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLAVLVVT*RGATVL
Trigger: AAGCACGGTAGCACCCCGCCAGGTGACAACAAGGAC...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGTCATCCTGCCACTCCTaGTCCTCCTGGGAGGCATCG +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDESSCHS*SSWEAS
Trigger: CGATGCCTCCCAGGAGGACCAGGAGTGGCAGGATGA...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAATGGAATATTCTGACTaGTTATCAGAGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRMEYSD*LSESSS
Trigger: GGATGAGCTCTCTGATAACCAGTCAGAATATTCCAT...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTACTCAGGGATCAAGTCTaGGGTGCTGTACTTCCCGTT +
Preference number: 4 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLLRDQV*GAVLPV
Trigger: AACGGGAAGTACAGCACCCCAGACTTGATCCCTGAG...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TCTACCAGCAGCAAAAACCAAACCCAGCCCAAAGACGCCAAACATACGGACACCCTTCTCCGTCTCCTCTaGCCGCTCCTCTCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: STSSKNQTQPKDAKHTDTLLRLL*PLLSGS
Trigger: AGAGCCCGAGAGGAGCGGCCAGAGGAGACGGAGAAG...GGTGTCCGTATGTTTGGCGTCTTTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGAGCCTTGGTGTCATCTaGCCTGAGTTCGGAACTGTC +
Preference number: 4 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWSLGVI*PEFGTV
Trigger: GACAGTTCCGAACTCAGGCCAGATGACACCAAGGCT...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTGGTCCCCGGCGCGGTTaGTCAGGCGGCTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARGPRRG*SGGSGC
Trigger: GCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACC...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp TTGCAGACCTGGATCCAGACTGGAGTGTGGGAATGCGCCAAGAGGAAGGACTTGGTCCCAAGGTGGCGCTaGCTCCTAAAAAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LQTWIQTGVWECAKRKDLVPRWR*LLKRWQ
Trigger: CTGCCACCTTTTTAGGAGCCAGCGCCACCTTGGGAC...CAAGTCCTTCCTCTTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGATGAGGTGGCACTTCTaGGCTCTGGCCCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDEMRWHF*ALAQLS
Trigger: GCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCAT...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp CAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCACCACATGTGGGAAGATaGTTTTGGGATGTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: QTGTLGSRSCPRTLILPAPHVGR*FWDVRA
Trigger: CGCCCTGACATCCCAAAACCATCTTCCCACATGTGG...TGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CTTTCACGGGGGACGCTGCTTCTGCCTCAGGCGTGTATGAGAGGGCCCTGCAGACCAACAACCCACATGTaGGAAGATGGTTTTGGGATG +
Preference number: 4 (lower is better)
Translates to: LSRGTLLLPQACMRGPCRPTTHM*EDGFGM
Trigger: CATCCCAAAACCATCTTCCCACATGTGGGTTGTTGG...TCTGCAGGGCCCTCTCATACACGCCTGAGGCAGAAGCAGCGTCCCCCGTGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CCTCCAGGCAGAACTCTCCCCACGCCTTCCAAGAGTGCAGCCTCAGGCAAAAAGATCCAGACTGGAGTGTaGGAATGCGCCAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PPGRTLPTPSKSAASGKKIQTGV*ECAKRK
Trigger: CTTCCTCTTGGCGCATTCCCACACTCCAGTCTGGAT...CTTTTTGCCTGAGGCTGCACTCTTGGAAGGCGTGGGGAGAGTTCTGCCTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGCTGGCCAGGCTTTCCTaGGTGCCCGAGTCTAACCAG +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDELARLS*VPESNQ
Trigger: CTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCAG...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TGTCCCCTGCCCACAGACCCTGACGCACACTGGAGGCTCCAAGTGACCGACACTAGCCCTACTCAGCACTaGCTTAAAGTGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: CPLPTDPDAHWRLQVTDTSPTQH*LKVAGN
Trigger: ATTTCCAGCCACTTTAAGCCAGTGCTGAGTAGGGCT...AGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCAGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGCTGCCTTCCAAGACCTTaGCTCAAACATGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DWHFGLAFMPEDPDSTSSCLPRP*LKHGSA
Trigger: TGCAGAGCCATGTTTGAGCCAAGGTCTTGGAAGGCA...GCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTCCCTTTGCCAGCCTaGGGCTGTGCCTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: EEHLNYDEVALLGSGPAELPLPA*GCAWGK
Trigger: CTTTCCCCAGGCACAGCCCCAGGCTGGCAAAGGGAG...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TCTACCAGCAGCAAAAACCAAACCCAGCCCAAAGACGCCAAACATACGGACACCGCTCACAGGGGAGCCTaGCTTCCAAAGCTGGACCCG +
Preference number: 4 (lower is better)
Translates to: STSSKNQTQPKDAKHTDTAHRGA*LPKLDP
Trigger: CGGGTCCAGCTTTGGAAGCCAGGCTCCCCTGTGAGC...GGTGTCCGTATGTTTGGCGTCTTTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCGGGCAGCGGCGGGTTaGGGCAATGCAGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARRAAAG*GNAGGR
Trigger: CCTACCACCTGCATTGCCTCAACCCGCCGCTGCCCG...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp AGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCTGGAGTCAGGAAGTTaGGGAGATGGAACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SDRHLTKSIWLLAPMYPSLESGS*GDGTAP
Trigger: AGGAGCTGTTCCATCTCCTCAACTTCCTGACTCCAG...GCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATCGTACTGCGCCACCTTaGAGGAGCTCAGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDRTAPP*RSSGTR
Trigger: ACGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACG...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp CAACGAGGGCCAACCCCAGTGCTTGCCACTGCTTGTTTGGGGACGAGGGCACGGTTTGGCAGAGATGACTaGCAAACCAAGAAGGACATT +
Preference number: 4 (lower is better)
Translates to: QRGPTPVLATACLGTRARFGRDD*QTKKDI
Trigger: AATGTCCTTCTTGGTTTGTCAGTCATCTCTGCCAAA...CCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCCCTCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCCATGCCCGAGGACCCTaGTTCTACCAGCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: EISNRRLALWARVHARGPHARGP*FYQQQK
Trigger: TTTTTGCTGCTGGTAGAATCAGGGTCCTCGGGCATG...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTAAAACACAACGCCAGTaGGTTTGGGCTGATGCACCA +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCKTQRQ*VWADAP
Trigger: TGGTGCATCAGCCCAAACTCACTGGCGTTGTGTTTT...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCATCCAGCTGGTACGGGTaGAGTGTGCCGCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVASSWYG*SVPPVE
Trigger: CTCCACAGGCGGCACACTGCACCCGTACCAGCTGGA...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CCTCCAGGCAGAACTCTCCCCACGCCTTCCAAGAGTGCAGCCTCAGGCAAAAAGCATAGTGGATCACACTaGTGTCCTCCACGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PPGRTLPTPSKSAASGKKHSGSH*CPPRPC
Trigger: ACAAGGACGTGGAGGACAGCAGTGTGATCCACTATG...CTTTTTGCCTGAGGCTGCACTCTTGGAAGGCGTGGGGAGAGTTCTGCCTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGCCAGCACCTCGATGTTaGCACCAACTCGGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPEPAPRC*HQLGRE
Trigger: TTCTCGCCCGAGTTGGTGGCAACATCGAGGTGCTGG...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCCAGCACCTCGATGTTaGCACCAACTCGGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELPAPRC*HQLGRE
Trigger: TTCTCGCCCGAGTTGGTGGCAACATCGAGGTGCTGG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp TTGGTGTCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCCGGAACTGTCCCCTCTaGTGTGGATCAAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LVSSGLSSELSPLLWIKLRNCPL*CGSSSA
Trigger: AGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCG...GAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGACACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CCTCCAGGCAGAACTCTCCCCACGCCTTCCAAGAGTGCAGCCTCAGGCAAAAAGTCAATGACCAACGCCTaGTCCAGCAGCTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: PPGRTLPTPSKSAASGKKSMTNA*SSSLNL
Trigger: CAGGTTTAAGCTGCTGGAGCAGGCGTTGGTCATTGA...CTTTTTGCCTGAGGCTGCACTCTTGGAAGGCGTGGGGAGAGTTCTGCCTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTTCAATGACCAACGCCTaGTCCAGCAGCTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCSMTNA*SSSLNL
Trigger: CAGGTTTAAGCTGCTGGAGCAGGCGTTGGTCATTGA...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTCAATGACCAACGCCTaGTCCAGCAGCTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGSMTNA*SSSLNL
Trigger: CAGGTTTAAGCTGCTGGAGCAGGCGTTGGTCATTGA...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTGGCGGCTCAGGATGCTaGGCTCCGACATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALGGSGC*APTSAA
Trigger: GGCTGCAGATGTCGGAGCGCAGCATCCTGAGCCGCC...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp CTCTCCTTGCTGGCTGGGCTCTCGTGCTTGTCCTCACTCTCCACTCTATCCAAGGCTGGAAATGAGCGCTaGAACACAGGGAAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: LSLLAGLSCLSSLSTLSKAGNER*NTGKSR
Trigger: TCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGC...CTTGGATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR GCA 90 bp TCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCGCTGGAAATGAGCGCTaGAACACAGGGAAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: SSGLSSELSPLLWIKLSSAGNER*NTGKSR
Trigger: TCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGC...GGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGAGTCCACAGGGCAGTaGCAGGACTACCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDEESTGQ*QDYLGS
Trigger: AGACCCAAGGTAGTCCTGGCACTGCCCTGTGGACTC...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCACGCCTTCCAAGAGTaGAGCCTCAGGCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLAHAFQE*SLRQKA
Trigger: GGCTTTTTGCCTGAGGCTGCACTCTTGGAAGGCGTG...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGAAGGAAGGTGGGCACTaGTCCCAACGAGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPKEGGH*SQRGPT
Trigger: GGTTGGCCCTCGTTGGGAGCAGTGCCCACCTTCCTT...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTCTTCTTGGCAATGAGTaGCCTGAGGAACTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCLLGNE*PEELAE
Trigger: TTCAGCCAGTTCCTCAGGCCACTCATTGCCAAGAAG...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCCAGGTAGGGCCCTTTaGAGTGGCCCTCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELPGRAL*SGPPCR
Trigger: TCTACAAGGAGGGCCACTCCAAAGGGCCCTACCTGG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGTCTTCCCACTCCGAATaGCGTTGTCCTCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWSSHSE*RCPQRK
Trigger: TTTCCTTTGAGGACAACGCCATTCGGAGTGGGAAGA...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGCATCGTAGGAGCCATTaGGCAAGACAGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPEHRRSH*ARQGPP
Trigger: TGGAGGCCCCTGTCTTGCCCAATGGCTCCTACGATG...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGATCACCTTCTTGTTCTaGCCGATGCGGTGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPITFLF*PMRWAR
Trigger: CCGCGCCCACCGCATCGGCCAGAACAAGAAGGTGAT...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGCCCCCTTTGGAGGACTaGACATCAGGGATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDEPPLED*TSGMGV
Trigger: CACACCCATCCCTGATGTCCAGTCCTCCAAAGGGGG...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGTCATCCTGCCACTCCTaGTCCTCCTGGGAGGCATCG +
Preference number: 4 (lower is better)
Translates to: EEHLNYDEVALLGSGPAESSCHS*SSWEAS
Trigger: CGATGCCTCCCAGGAGGACCAGGAGTGGCAGGATGA...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGCGGGCACTGGTGTGTTaGGGTCCGAGGAGATCACCT +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPRALVC*GPRRSP
Trigger: AGGTGATCTCCTCGGACCCCAACACACCAGTGCCCG...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTAGGGCTGGCGGGCACTaGTGTGTTGGGGTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALRAGGH*CVGVRG
Trigger: TCCTCGGACCCCAACACACCAGTGCCCGCCAGCCCT...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGGGCTCTCTCCTTGCTaGCTGGGCTCTCGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPGLSPC*LGSRAC
Trigger: ACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCC...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GGCTCTCTCCTTGCTGGCTGGGCTCTCGTGCTTGTCCTCACTCTCCACTCTATCGAGGATCATGTACCGTaGGTCATTCTGGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: GSLLAGWALVLVLTLHSIEDHVP*VILDVL
Trigger: CAGGACATCCAGAATGACCCACGGTACATGATCCTC...GATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CCA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCAGGATGCGGGACAGCATaGATGGCAGCCGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVAGCGTA*MAAGSR
Trigger: ACGTGACCCGGCTGCCATCCATGCTGTCCCGCATCC...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTACTTTTTGTCCCAAGGTaGCGCTGGCTCCTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLLFVPR*RWLLKR
Trigger: CCTTTTTAGGAGCCAGCGCCACCTTGGGACAAAAAG...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGCCAGCCCACCCTCCCTaGGATCATACGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPPAHPP*DHTLLP
Trigger: AGGCAGAAGCGTATGATCCCAGGGAGGGTGGGCTGG...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
3UTR CAA 72 bp GCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTaGAATTATGATGAGGTGGCACTTCTGGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: AWLWGQRCVEEH*NYDEVALLGSG
Trigger: GCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
3UTR CAA 72 bp GTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTaGGGATGTCAGGGCGCTCCTGGCAGGAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: VGFQQPTCGKMV*GCQGAPGRKQG
Trigger: GCCTTGTTTCCTGCCAGGAGCGCCCTGACATCCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTGCGGAGGGGAGATGGTaGCCGTCTCTACAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARAEGRW*PSLQPQ
Trigger: CTGCGGCTGTAGAGACGGTCACCATCTCCCCTCCGC...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTCATCTTTGGAGCCTTTaGTCTTCTTCCTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGHLWSL*SSSSLQ
Trigger: CTGGAGTGAGGAAGAAGATCAAAGGCTCCAAAGATG...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGCAGCACGTGGAATTTaGTCTGCACTTCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWAARGI*SALLSS
Trigger: TGAAGAAAGAAGTGCAGATCAAATTCCACGTGCTGC...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGAGCCCTCCAGGTTGTTaGACCTCTCTGGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDESPPGC*TSLESG
Trigger: TCCTGACTCCAGAGAGGTTCAACAACCTGGAGGGCT...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTGCTCCACCCGGACAATaGGCTCGGTCTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARAPPGQ*ARSWPA
Trigger: TGCCGGCCAAGACCGAGCTCATTGTCCGGGTGGAGC...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATCAGCATGAGCTTCCCTaGAGACTTGACCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDQHELP*RLDQGA
Trigger: AGCTCCCTGGTCAAGTCTTCAGGGAAGCTCATGCTG...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp CCAAAGACGCCAAACATACGGACACCACCATCACCACTTTTGGCAGAGATGACTCCTCCGTGCCGAACTTaGGGATGTCGTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PKTPNIRTPPSPLLAEMTPPCRT*GCRPAP
Trigger: AGGAGCTGGACGACATCCTCAAGTTCGGCACGGAGG...AGTCATCTCTGCCAAAAGTGGTGATGGTGGTGTCCGTATGTTTGGCGTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGCGTACTGCGCCACCTTaGAGGAGCTCAGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPRTAPP*RSSGTR
Trigger: ACGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACG...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGCCAATGGAATATTCTaGCTGGTTATCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLSLFSCLRDCRRPLCPSANGIF*LVIREL
Trigger: GAGCTCTCTGATAACCAGTCAGAATATTCCATTGGC...GGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR GCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGTCTTTCTTTGGTAGTTaGGATACATCACCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGSFFGS*DTSPCG
Trigger: ACCACACGGTGATGTATCGCAACTACCAAAGAAAGA...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp CGAGGACGGCTAGATATCGGTCACATAGGGCCCCAGGGGCATCTGGTTGTAGTTTCGATGTACCATGGCTaGTTGTCGAACTTGACCGTG +
Preference number: 4 (lower is better)
Translates to: RGRLDIGHIGPQGHLVVVSMYHG*LSNLTV
Trigger: CACGGTCAAGTTCGACAAGCAGCCATGGTACATCGA...AACTACAACCAGATGCCCCTGGGGCCCTATGTGACCGATATCTAGCCGTCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTGGGAGAGGTAGGGGTGGTTaGAGCACTTTTTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SGGVGGIPTTHMWEDGFGRGRGG*STFSGP
Trigger: TGGACCTGAAAAAGTGCTGCAACCACCCCTACCTCT...CCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CGAGGACGGCTAGATATCGGTCACATAGGGCCCCAGGGGCATCTGGTTGTAGTTAGAGGTAGGGGTGGTTaGAGCACTTTTTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RGRLDIGHIGPQGHLVVVRGRGG*STFSGP
Trigger: TGGACCTGAAAAAGTGCTGCAACCACCCCTACCTCT...AACTACAACCAGATGCCCCTGGGGCCCTATGTGACCGATATCTAGCCGTCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR GCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGATTGAATCTGTCGATTaGCTCCTGCCGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPIESVD*LLPEAP
Trigger: GGGGGCCTCCGGCAGGAGGCAATCGACAGATTCAAT...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATACCGTGCTTCTTCTTTaGACTGGCGGCCAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDTVLLL*TGGQVP
Trigger: GGGAACTTGGCCGCCAGTGCAAAGAAGAAGCACGGT...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp TCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCCATAGTGGATCACACTaGTGTCCTCCACGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSGLSSELSPLLWIKLSSHSGSH*CPPRPC
Trigger: ACAAGGACGTGGAGGACAGCAGTGTGATCCACTATG...GGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGGGCACGCCGTCTaGGAAGGTCTCTGCACCATC +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARPGHAV*EGLCTI
Trigger: GATGGTGCAGAGACCTTCGCAGACGGCGTGCCCCGG...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGTCTTTGTCACCATTTTaGTGTGTTTCAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGSLSPF*CVSMGS
Trigger: GGAGCCCATTGAAACACAGCAAAATGGTGACAAAGA...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGTGGTTCAGGACCTTGTaGAGGACGGCATTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: EEHLNYDEVALLGSGPAEWFRTL*RTALAG
Trigger: GCCTGCCAATGCCGTCCTGCACAAGGTCCTGAACCA...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGTCATACGCTTCTGCCTaGTGTGAAGAGCCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPSYASA*CEEPGP
Trigger: TGGCCCCGGCTCTTCACAGCAGGCAGAAGCGTATGA...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTCCTCTCCAGGGGTaGTTGGGCTCCAATCGCTGC +
Preference number: 4 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVALPLQG*LGSNRC
Trigger: GCAGCGATTGGAGCCCAAGCACCCCTGGAGAGGAAG...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGAGGTGAGCAGCACGTaGAATTTGATCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCEVSST*NLICTS
Trigger: AGAAGTGCAGATCAAATTCCACGTGCTGCTCACCTC...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCATGGCTCCTAAAAAGGTaGCAGCTTTTCTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: QTGTLGSRSCPRTLILPAWLLKR*QLFSPM
Trigger: CATGGGAGAGAAAAGCTGCCACCTTTTTAGGAGCCA...TGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTATATCTGCTGGATGGTaGGGTCCCCGGCGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALISAGW*GPRRGW
Trigger: CCAACCGCGCCGGGGACCCCACCATCCAGCAGATAT...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
CDS-3UTR TCA 90 bp TCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACCTCCTTGGGTACACTTGTTTTCCTTaGGCTTCTTGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SGFWLPCTRAHSPLHLLGYTCFP*ASWVSS
Trigger: AGAAGAAACCCAAGAAGCTCAAGGAAAACAAGTGTA...CCCAAGGAGGTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGCTGGAGTCAGGAAGTTaGGGAGATGGAACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPELESGS*GDGTAP
Trigger: AGGAGCTGTTCCATCTCCTCAACTTCCTGACTCCAG...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGAGCCCTCCAGGTTGTTaGACCTCTCTGGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPSPPGC*TSLESG
Trigger: TCCTGACTCCAGAGAGGTTCAACAACCTGGAGGGCT...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTACCACCTGCCCGGGTTaGGAGGAGGAAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALTTCPG*EEEAEL
Trigger: CAGTTCTGCTTCCTCCTCTCAACCCGGGCAGGTGGT...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACGTACTGCGCCACCTTaGAGGAGCTCAGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVARTAPP*RSSGTR
Trigger: ACGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACG...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TCTACCAGCAGCAAAAACCAAACCCAGCCCAAAGACGCCAAACATACGGACACCAGGCATCGTTGTAGTTaGCCTGCTTGCGGATGCGCT +
Preference number: 4 (lower is better)
Translates to: STSSKNQTQPKDAKHTDTRHRCS*PACGCA
Trigger: AGCGCATCCGCAAGCAGGTCAACTACAACGATGCCT...GGTGTCCGTATGTTTGGCGTCTTTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTGCCAATGGAATATTCTaGCTGGTTATCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGANGIF*LVIREL
Trigger: GAGCTCTCTGATAACCAGTCAGAATATTCCATTGGC...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp CCTCCAGGCAGAACTCTCCCCACGCCTTCCAAGAGTGCAGCCTCAGGCAAAAAGGTGTGGAAGAACACTTaGATTATGATGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PPGRTLPTPSKSAASGKKVWKNT*IMMRWH
Trigger: GTGCCACCTCATCATAATTCAAGTGTTCTTCCACAC...CTTTTTGCCTGAGGCTGCACTCTTGGAAGGCGTGGGGAGAGTTCTGCCTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTCTGATAGCTCATCATTaGTCCCCTCTTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCLIAHH*SPLSSS
Trigger: GGAAGAAGAAAGAGGGGAGCAATGATGAGCTATCAG...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTTCGATGTACCATGGCTaGTTGTCGAACTTGACCGTG +
Preference number: 4 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSSMYHG*LSNLTV
Trigger: CACGGTCAAGTTCGACAAGCAGCCATGGTACATCGA...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGTCCACGTTCTCCTCCTaGTTGATGATTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDESTFSS*LMISRS
Trigger: GGAGCGGGAAATCATCAAGCAGGAGGAGAACGTGGA...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCTGGCTGGCTGGGCTCTCGTaGTTGTCCTCACTCTCCACT +
Preference number: 4 (lower is better)
Translates to: EPMEYSDWLSESSSCHSWLAGLS*LSSLST
Trigger: AGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAG...CCAGGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR GCA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCATGTATGAGAGGGCCCTaGAGACGTGCTCACTCCACC +
Preference number: 4 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVACMRGP*RRAHST
Trigger: GGTGGAGTGAGCACGTCTGCAGGGCCCTCTCATACA...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCGATACATCACCGTGTaGTACAGCTCCAGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELRYITV*YSSSCS
Trigger: GCTACAGCTGGAGCTGTACCACACGGTGATGTATCG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTGGGGAGGTGAGCAGCACGTaGAATTTGATCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: SGGVGGIPTTHMWEDGFGEVSST*NLICTS
Trigger: AGAAGTGCAGATCAAATTCCACGTGCTGCTCACCTC...CCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTATGCAGCTTCTTGATCTaGTCTTCCTTGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLCSFLI*SSLEMS
Trigger: TGACATCTCCAAGGAAGACCAGATCAAGAAGCTGCA...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCATCCGGTCCAGCAGCTTaGAGATGGCCGCATCGTCAT +
Preference number: 4 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVASGPAA*RWPHRH
Trigger: ATGACGATGCGGCCATCTCCAAGCTGCTGGACCGGA...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCTGGTCCGGTCCAGCAGCTTaGAGATGGCCGCATCGTCAT +
Preference number: 4 (lower is better)
Translates to: EPMEYSDWLSESSSCHSWSGPAA*RWPHRH
Trigger: ATGACGATGCGGCCATCTCCAAGCTGCTGGACCGGA...CCAGGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CCA 90 bp TCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACCTCCTTGGGCATCCTCAGAGCCAATaGAATATTCTGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: SGFWLPCTRAHSPLHLLGHPQSQ*NILTGY
Trigger: ATAACCAGTCAGAATATTCCATTGGCTCTGAGGATG...CCCAAGGAGGTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp ACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTCTCCATCCTCAGAGCCAATaGAATATTCTGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: TLQLPPGLSSSTLPFRPLHPQSQ*NILTGY
Trigger: ATAACCAGTCAGAATATTCCATTGGCTCTGAGGATG...GAGAGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CCA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCAGCGGCTGGAAGGGCCTaGACTTCCAGGGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: QINEISSKKSSGKGGEGAAAGRA*TSRGCL
Trigger: AAGGCAGCCCCTGGAAGTCCAGGCCCTTCCAGCCGC...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CCAAAGACGCCAAACATACGGACACCACCATCACCACTTTTGGCAGAGATGACTGTCCGGGGGAGTGGGTaGGATTCCAACAACCCACAT +
Preference number: 4 (lower is better)
Translates to: PKTPNIRTPPSPLLAEMTVRGSG*DSNNPH
Trigger: ATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGAC...AGTCATCTCTGCCAAAAGTGGTGATGGTGGTGTCCGTATGTTTGGCGTCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CCAAAGACGCCAAACATACGGACACCACCATCACCACTTTTGGCAGAGATGACTTCTCCTCTCCCAAACTaGTCAGCCCCAAACCCGCTC +
Preference number: 4 (lower is better)
Translates to: PKTPNIRTPPSPLLAEMTSPLPN*SAPNPL
Trigger: GAGCGGGTTTGGGGCTGACCAGTTTGGGAGAGGAGA...AGTCATCTCTGCCAAAAGTGGTGATGGTGGTGTCCGTATGTTTGGCGTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTGGGCCTCAAGTGTCCTaGGATGACAGGAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALGPQVS*DDRSEG
Trigger: GCCCTCACTCCTGTCATCCCAGGACACTTGAGGCCC...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCGGCTAGATATCTGCTaGATGGTGGGGTCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARRLDIC*MVGSPA
Trigger: CGCCGGGGACCCCACCATCCAGCAGATATCTAGCCG...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
3UTR CAA 72 bp AAAGTGGCTGGAAATTTCCAATCGCAGACTGGCACTTaGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTA +
Preference number: 4 (lower is better)
Translates to: KVAGNFQSQTGT*GSRSCPRTLIL
Trigger: TAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTCCAGCCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGTACACTTGTTTTCCTTaGGCTTCTTGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWYTCFP*ASWVSS
Trigger: AGAAGAAACCCAAGAAGCTCAAGGAAAACAAGTGTA...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTTGGTGTCATCTGGCCTaGGTTCGGAACTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALWCHLA*VRNCPL
Trigger: GAGGGGACAGTTCCGAACTCAGGCCAGATGACACCA...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGCAACACGCATGTGGATaGACCATAACATGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDEQHACG*TITCEP
Trigger: GGGCTCACATGTTATGGTTCATCCACATGCGTGTTG...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCTTCTTGCCCAGGGCTaGAGAGCATTCGGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARLLAQG*RAFGAH
Trigger: GTGCGCTCCGAATGCTCTGCAGCCCTGGGCAAGAAG...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGCATAGTGGATCACACTaGTGTCCTCCACGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPEHSGSH*CPPRPC
Trigger: ACAAGGACGTGGAGGACAGCAGTGTGATCCACTATG...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp TCTACCAGCAGCAAAAACCAAACCCAGCCCAAAGACGCCAAACATACGGACACCTCCACGTTCTCCTCCTaGTTGATGATTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: STSSKNQTQPKDAKHTDTSTFSS*LMISRS
Trigger: GGAGCGGGAAATCATCAAGCAGGAGGAGAACGTGGA...GGTGTCCGTATGTTTGGCGTCTTTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TCAGAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCTGTCGTCGTCCACTCTaGCCTTCCGGCCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SEPMEYSDWLSESSSCHSCRRPL*PSGLSS
Trigger: TGAAGAGAGGCCGGAAGGGCAGAGTGGACGACGACA...GGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTCTGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTAGGCACTGTGGATGCTaGCGCTGTCGAAGTCCGACT +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALRHCGC*RCRSPT
Trigger: AGTCGGACTTCGACAGCGCCAGCATCCACAGTGCCT...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp AGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCTGCAGCTTCTTGATCTaGTCTTCCTTGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: SDRHLTKSIWLLAPMYPSCSFLI*SSLEMS
Trigger: TGACATCTCCAAGGAAGACCAGATCAAGAAGCTGCA...GCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGTACTTCTTCTGCATCTaGCTCAGCTCCACCCGGACA +
Preference number: 4 (lower is better)
Translates to: NEISSKKSSGKGGEGARPYFFCI*LSSTRT
Trigger: TGTCCGGGTGGAGCTGAGCCAGATGCAGAAGAAGTA...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCAGAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCTCTCTCCTTGCTGGCTaGGCTCTCGTGCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SEPMEYSDWLSESSSCHSSLLAG*ALVLVL
Trigger: GAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGA...GGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTCTGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CCA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCAGGATGCGGGACAGCATaGATGGCAGCCGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: QINEISSKKSSGKGGEGAGCGTA*MAAGSR
Trigger: ACGTGACCCGGCTGCCATCCATGCTGTCCCGCATCC...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR TCA 90 bp TCAGAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCAGGCATCGTTGTAGTTaGCCTGCTTGCGGATGCGCT +
Preference number: 4 (lower is better)
Translates to: SEPMEYSDWLSESSSCHSRHRCS*PACGCA
Trigger: AGCGCATCCGCAAGCAGGTCAACTACAACGATGCCT...GGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR TCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTTGGTGTCATCTGGCCTaGGTTCGGAACTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARWCHLA*VRNCPL
Trigger: GAGGGGACAGTTCCGAACTCAGGCCAGATGACACCA...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGCAGCCAGGCGGGCGTTaGGGGCCATGGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKQPGGR*GPWRGG
Trigger: ACCACCCCGCCATGGCCCTCAACGCCCGCCTGGCTG...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TTGGTGTCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCGTGTGGAAGAACACTTaGATTATGATGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LVSSGLSSELSPLLWIKLVWKNT*IMMRWH
Trigger: GTGCCACCTCATCATAATTCAAGTGTTCTTCCACAC...GAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TCTACCAGCAGCAAAAACCAAACCCAGCCCAAAGACGCCAAACATACGGACACCCCAGTGAGTTTGGGCTaGTGCACCACAACCTGTAAA +
Preference number: 4 (lower is better)
Translates to: STSSKNQTQPKDAKHTDTPVSLG*CTTTCK
Trigger: TTTACAGGTTGTGGTGCATCAGCCCAAACTCACTGG...GGTGTCCGTATGTTTGGCGTCTTTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGTGCGGTGGGCGCGGCTaGAGGCCTGAGGCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKCGGRG*RPEARD
Trigger: ATCCCGGGCCTCAGGCCTTCAGCCGCGCCCACCGCA...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR GCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTAGGAACACGATGGTCTaGACCGTCTTGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARRNTMV*TVLPRP
Trigger: GGGTCTGGGCAAGACGGTGCAGACCATCGTGTTCCT...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTCGGAACTGTCCCCTCTaGTGTGGATCAAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALRNCPL*CGSSSA
Trigger: AGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCG...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp ACGTCGTCCTTGAAGAGTTCCTCCGTGCCGAACTTGAGGATGTCGTCCAGCTCCTCTTTGTCACCATTTTaGTGTGTTTCAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TSSLKSSSVPNLRMSSSSSLSPF*CVSMGS
Trigger: GGAGCCCATTGAAACACAGCAAAATGGTGACAAAGA...GGAGCTGGACGACATCCTCAAGTTCGGCACGGAGGAACTCTTCAAGGACGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR GCA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCAGGGTGGTTGGGGTCCTaGGTCATGTTCAGGTACGCG +
Preference number: 4 (lower is better)
Translates to: QINEISSKKSSGKGGEGAGWLGS*VMFRYA
Trigger: CGCGTACCTGAACATGACGCAGGACCCCAACCACCC...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAACTGCGCTCCGACATCTaGAGCCGGGCGGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKLRSDI*SRAATG
Trigger: CCCGGTGGCCGCCCGGCTGCAGATGTCGGAGCGCAG...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCATCAGGCGGCTCAGGATaGTGCGCTCCGACATCTGCA +
Preference number: 4 (lower is better)
Translates to: QINEISSKKSSGKGGEGASGGSG*CAPTSA
Trigger: TGCAGATGTCGGAGCGCAGCATCCTGAGCCGCCTGA...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTGCAGTGTGCCGCCTGTaGAGTCGATGTACCATGGCT +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARAVCRL*SRCTMA
Trigger: AGCCATGGTACATCGACTCCACAGGCGGCACACTGC...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGAGTAAAGGAACACGATaGTCTGCACCGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: EEHLNYDEVALLGSGPAESKGTR*SAPSCP
Trigger: TGGGCAAGACGGTGCAGACCATCGTGTTCCTTTACT...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGAGGTGAGCAGCACGTaGAATTTGATCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDEEVSST*NLICTS
Trigger: AGAAGTGCAGATCAAATTCCACGTGCTGCTCACCTC...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTATGTCAGGGCGCTCCTaGCAGGAAACAAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALMSGRS*QETRQQ
Trigger: TTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACAT...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TCAGAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCGCAGCAGCACAGACCTaGATGTCATTGTGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: SEPMEYSDWLSESSSCHSAAAQT*MSLCGF
Trigger: GAACCCGCACAATGACATCCAGGTCTGTGCTGCTGC...GGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR TCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTGCTTCCCTGAAGACTTaGCCAGGGAGCTTCCATCGT +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARASLKT*PGSFHR
Trigger: ACGATGGAAGCTCCCTGGTCAAGTCTTCAGGGAAGC...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTGCTCCAATCGCTGCTTaGGGAGTTCAGGACACACAC +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARAPIAA*GVQDTH
Trigger: GTGTGTGTCCTGAACTCCTCAAGCAGCGATTGGAGC...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCTGATAGCTCATCATTaGTCCCCTCTTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: EHLNYDEVALLGSGPAELLIAHH*SPLSSS
Trigger: GGAAGAAGAAAGAGGGGAGCAATGATGAGCTATCAG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTTCGGGGAGTAGTCACTaGCTTCACTCTCCGACTTCT +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALSGSSH*LHSPTS
Trigger: AGAAGTCGGAGAGTGAAGGCAGTGACTACTCCCCGA...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTTTGGGCTCGCGTTCATaGCCGAGGACCCTGATTCTA +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARLGSRS*PRTLIL
Trigger: TAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAA...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTGCTGCCCCGAGGACTTaGGCTCCTTTAAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARAAPRT*APLSIH
Trigger: ATGGATGCTTAAAGGAGCCCAAGTCCTCGGGGCAGC...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCATCCGGTCCAGCAGCTTaGAGATGGCCGCATCGTCAT +
Preference number: 4 (lower is better)
Translates to: QINEISSKKSSGKGGEGASGPAA*RWPHRH
Trigger: ATGACGATGCGGCCATCTCCAAGCTGCTGGACCGGA...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp AGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCATGGAATATTCTGACTaGTTATCAGAGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: SDRHLTKSIWLLAPMYPSMEYSD*LSESSS
Trigger: GGATGAGCTCTCTGATAACCAGTCAGAATATTCCAT...GCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAATGTGGGTCGGGCAGGTaGCCCGGCAGGCGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKCGSGR*PGRRGS
Trigger: TGAGCCACGCCTGCCGGGCCACCTGCCCGACCCACA...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAGGGGCACGTCCGGCGTaGTTGTGGGGGCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: SIRHPTFIKTNVFKSSIGGARPA*LWGQRC
Trigger: ACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC...TCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
CDS-3UTR CCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAACGGCCCCCTCTTAGCTaGGCCTGGGCCGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQRPPLS*AWAGGV
Trigger: GACTCCACCGGCCCAGGCCCAGCTAAGAGGGGGCCG...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAGTCTGGCCGATGCGGTaGGCGCGGCTGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKVWPMR*ARLKAW
Trigger: CCAGGCCTTCAGCCGCGCCCACCGCATCGGCCAGAC...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR TCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAGCCGGAGGCCCCCGGTaGTGCCACCATCAATCCGCT +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRAGGPR*CHHQSA
Trigger: AGCGGATTGATGGTGGCATCACCGGGGGCCTCCGGC...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCATGTCACCTGGCGGGGTaGTACCGTGCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QINEISSKKSSGKGGEGACHLAG*YRASSL
Trigger: CAAAGAAGAAGCACGGTAGCACCCCGCCAGGTGACA...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAGTCTGCGAAGGTCTCTaGACCATCCGCCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSVCEGL*TIRPRL
Trigger: GAGCCGGGGGCGGATGGTGCAGAGACCTTCGCAGAC...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp TCAGAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCTCATCTCCAGGTAGTTaGCCTTGTGGACCTCAGACT +
Preference number: 4 (lower is better)
Translates to: SEPMEYSDWLSESSSCHSSSPGS*PCGPQT
Trigger: AGTCTGAGGTCCACAAGGGCAACTACCTGGAGATGA...GGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTCTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR GCA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAGGCGGCTCAGGATGCTaGGCTCCGACATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSGGSGC*APTSAA
Trigger: GGCTGCAGATGTCGGAGCGCAGCATCCTGAGCCGCC...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
CDS-3UTR CCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTCTTCTTGGCAATGAGTaGCCTGAGGAACTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALLLGNE*PEELAE
Trigger: TTCAGCCAGTTCCTCAGGCCACTCATTGCCAAGAAG...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCAGAGCCCAGGATGGCCTaGTCAATGGTGATGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QINEISSKKSSGKGGEGAEPRMA*SMVMSS
Trigger: TGAGCTCATCACCATTGACCAGGCCATCCTGGGCTC...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGATCAGCACGTGCTGCCTaGAGAGGCCCTCCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRSARAA*RGPPGA
Trigger: TGCCCCGGGAGGGCCTCTCCAGGCAGCACGTGCTGA...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGGGGGCACGTCCGGCGTaGTTGTGGGGGCAACGCTGT +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKGARPA*LWGQRC
Trigger: ACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR TCA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACTGGAGTCAGGAAGTTaGGGAGATGGAACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QINEISSKKSSGKGGEGALESGS*GDGTAP
Trigger: AGGAGCTGTTCCATCTCCTCAACTTCCTGACTCCAG...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGCCACCCCGAGTCACCTaGGCCCATGGGGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKPPRVT*AHGAMP
Trigger: AGGCATTGCCCCATGGGCTCAGGTGACTCGGGGTGG...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGACCTGCCCACAGACCCTaGCGCACACTGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRPAHRP*RTLEAP
Trigger: TGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCAGG...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCACTCGGGCTCTCTCCTTaGTGGCTGGGCTCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSLGLSP*WLGSRA
Trigger: AGCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAG...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAAGCCGTGCGTCACGATaGCCGCCAGCAGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSSRASR*PPAASS
Trigger: ACTACTGGCTGCTGGCGGGCATCGTGACGCACGGCT...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCAGCTGGAAATGAGCGCTaGAACACAGGGAAGTCTCGA +
Preference number: 4 (lower is better)
Translates to: QINEISSKKSSGKGGEGAAGNER*NTGKSR
Trigger: TCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGC...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAGCAGCAAGCCCTTGGTaGTGCGGCTGGGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKAASPW*CGWEGS
Trigger: AGACCCCTCCCAGCCGCAGCACCAAGGGCTTGCTGC...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGCCGTGGGGTCCACAATaGGCGTGTCCGGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKPWGPQ*ACPAAS
Trigger: AGAAGCCGCCGGACACGCCCATTGTGGACCCCACGG...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAGGCAGGCCCACTCGATaGAGCCCAGGATGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKGRPTR*SPGWPG
Trigger: ACCAGGCCATCCTGGGCTCCATCGAGTGGGCCTGCC...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGGGCAGGCCCACTCGATaGAGCCCAGGATGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKGRPTR*SPGWPG
Trigger: ACCAGGCCATCCTGGGCTCCATCGAGTGGGCCTGCC...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAGGGCTGGCGGGCACTaGTGTGTTGGGGTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKRAGGH*CVGVRG
Trigger: TCCTCGGACCCCAACACACCAGTGCCCGCCAGCCCT...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTGAGGATCATGTACCGTaGGTCATTCTGGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGAREDHVP*VILDVL
Trigger: CAGGACATCCAGAATGACCCACGGTACATGATCCTC...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAAGGGCCATGGCGGGGTaGTTGGGGTCCTGCGTCATG +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRRAMAG*LGSCVM
Trigger: CATGACGCAGGACCCCAACCACCCCGCCATGGCCCT...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAGGGCCATGGCGGGGTaGTTGGGGTCCTGCGTCATG +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQRAMAG*LGSCVM
Trigger: CATGACGCAGGACCCCAACCACCCCGCCATGGCCCT...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGACTTTTCTCTCCCATGTaGGTCGGGCAGGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SIRHPTFIKTNVFKSSIGLFSPM*VGQVAR
Trigger: CCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAG...TCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
CDS-3UTR CCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTTGGCTCCTAAAAAGGTaGCAGCTTTTCTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALWLLKR*QLFSPM
Trigger: CATGGGAGAGAAAAGCTGCCACCTTTTTAGGAGCCA...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCTTTTTGTCCCAAGGTaGCGCTGGCTCCTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARLFVPR*RWLLKR
Trigger: CCTTTTTAGGAGCCAGCGCCACCTTGGGACAAAAAG...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGACGTCCGGCGTGGTTGTaGGGGCAACGCTGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SIRHPTFIKTNVFKSSIGRPAWL*GQRCVE
Trigger: TTCCACACAGCGTTGCCCCCACAACCACGCCGGACG...TCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
CDS-3UTR CCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAATGCCCTGTCTGGTGCTaGGAGGCTCCAAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKCPVWC*EAPSGQ
Trigger: CTGCCCGCTTGGAGCCTCCCAGCACCAGACAGGGCA...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAGGGACAGACACCTGCTaGCAGAGGATCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSGTDTC*QRIHLP
Trigger: GGGGAGGTGGATCCTCTGCCAGCAGGTGTCTGTCCC...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTACCTTGGCTCAAACATaGCTCTGCAGAAGCCCTACT +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARTLAQT*LCRSPT
Trigger: AGTAGGGCTTCTGCAGAGCCATGTTTGAGCCAAGGT...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGACCCCGAAGCGGAACTTaGGCCCGGCCGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRPRSGT*ARPSFS
Trigger: GGAAAAAGACGGCCGGGCTCAAGTTCCGCTTCGGGG...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAGGGCCCCGGGGGCATTaGATCTGTCGATTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRGPRGH*ICRLPP
Trigger: AGGAGGCAATCGACAGATTCAATGCCCCCGGGGCCC...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCAGAGGATCATGTACCGTaGGTCATTCTGGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: QINEISSKKSSGKGGEGAEDHVP*VILDVL
Trigger: CAGGACATCCAGAATGACCCACGGTACATGATCCTC...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGACTTTTCTCTCCCATGTaGGTCGGGCAGGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRLFSPM*VGQVAR
Trigger: CCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAG...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGGCCTTCAAGATGCGCTaGGCCGGGGACAGACACCTG +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKAFKMR*AGDRHL
Trigger: CAGGTGTCTGTCCCCGGCCCAGCGCATCTTGAAGGC...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGACAGGGTCCGGGGGAGTaGGTGGGATTCCAACAACCC +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRQGPGE*VGFQQP
Trigger: GGGTTGTTGGAATCCCACCCACTCCCCCGGACCCTG...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAATATCTGCTGGATGGTaGGGTCCCCGGCGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRISAGW*GPRRGW
Trigger: CCAACCGCGCCGGGGACCCCACCATCCAGCAGATAT...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
CDS-3UTR CCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAACGGCTAGATATCTGCTaGATGGTGGGGTCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQRLDIC*MVGSPA
Trigger: CGCCGGGGACCCCACCATCCAGCAGATATCTAGCCG...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
CDS-3UTR TCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAACCTCCACGTCGTCCTTaGAGAGTTCCTCCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKPPRRP*RVPPCR
Trigger: TCGGCACGGAGGAACTCTTCAAGGACGACGTGGAGG...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGGCATGCCCCAGCGCATaGTGGCGTTCAGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKACPSA*WRSERP
Trigger: AGGCCTTTCTGAACGCCATCATGCGCTGGGGCATGC...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCACTTTTGGCAGAGATaGCTGACAAACCAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARHFWQR*LTNQEG
Trigger: TCCTTCTTGGTTTGTCAGTCATCTCTGCCAAAAGTG...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAACTTCTTGCCCAGGGCTaGAGAGCATTCGGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQLLAQG*RAFGAH
Trigger: GTGCGCTCCGAATGCTCTGCAGCCCTGGGCAAGAAG...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAGGTACGGGTGCAGTGTaGCGCCTGTGGAGTCGATGT +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRGTGAV*RLWSRC
Trigger: ACATCGACTCCACAGGCGGCACACTGCACCCGTACC...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGACTGCCTTGGCTTCTGTaGCCCGGGGTCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: SIRHPTFIKTNVFKSSIGLPWLL*PGVFLI
Trigger: GATGAGAAAGACCCCGGGGCACAGAAGCCAAGGCAG...TCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTTCATCATTTTGGACATaGGGATCTTCGGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALSSFWT*GSSGSS
Trigger: AGAAGAACCCGAAGATCCCCATGTCCAAAATGATGA...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACATCCTCAGAGCCAATaGAATATTCTGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVAHPQSQ*NILTGY
Trigger: ATAACCAGTCAGAATATTCCATTGGCTCTGAGGATG...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGACAAACCTGCCCTGTCTaGTGCTGGGAGGCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRQTCPV*CWEAPS
Trigger: GCTTGGAGCCTCCCAGCACCAGACAGGGCAGGTTTG...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGGACCCTGACGCACACTaGAGGCTCCAAGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKDPDAH*RLQVTD
Trigger: GTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTC...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR TCA 90 bp TCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAGCCCTCCAGGTTGTTaGACCTCTCTGGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SIRHPTFIKTNVFKSSIGSPPGC*TSLESG
Trigger: TCCTGACTCCAGAGAGGTTCAACAACCTGGAGGGCT...TCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000462991.5
CDS-3UTR TCA 90 bp TCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAGGCATCGTTGTAGTTaGCCTGCTTGCGGATGCGCT +
Preference number: 4 (lower is better)
Translates to: SIRHPTFIKTNVFKSSIGRHRCS*PACGCA
Trigger: AGCGCATCCGCAAGCAGGTCAACTACAACGATGCCT...TCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTACATGCTCAAACTCCTaGACCTTCTTCCTAACTAGT +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARTCSNS*TFFLTS
Trigger: ACTAGTTAGGAAGAAGGTTCAGGAGTTTGAGCATGT...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGTGCAACACAAGCTGGTaGATCCTGACCCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKCNTSW*ILTQPW
Trigger: CCAGGGCTGGGTCAGGATTCACCAGCTTGTGTTGCA...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGGAACACGATGGTCTaGACCGTCTTGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKRNTMV*TVLPRP
Trigger: GGGTCTGGGCAAGACGGTGCAGACCATCGTGTTCCT...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGATGAGCACACGGTaGCCCTCATCCCGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SIRHPTFIKTNVFKSSIGKMSTR*PSSRSF
Trigger: GAAACTGCGGGATGAGGGGCACCGTGTGCTCATCTT...TCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000462991.5
CDS-3UTR GCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAATGTCGTCCAGCTCCTaGTTGGTCATGGACCCCGAC +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKMSSSS*LVMDPD
Trigger: GTCGGGGTCCATGACCAAGCAGGAGCTGGACGACAT...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAACTGGCTGGGCTCTCGTaGTTGTCCTCACTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQLAGLS*LSSLST
Trigger: AGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAG...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGTCCTTCGGCTCCCACTaGATCCCCTCCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKSFGSH*IPSFSQ
Trigger: CTGTGAGAAGGAGGGGATCCAGTGGGAGCCGAAGGA...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAACATCGTAGGAGCCATTaGGCAAGACAGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQHRRSH*ARQGPP
Trigger: TGGAGGCCCCTGTCTTGCCCAATGGCTCCTACGATG...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAGGAAGCAGAACTGCTaGGCCCCGGGGGCATTGAAT +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKRKQNC*APGALN
Trigger: ATTCAATGCCCCCGGGGCCCAGCAGTTCTGCTTCCT...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGATCCGGTCCAGCAGCTTaGAGATGGCCGCATCGTCAT +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRSGPAA*RWPHRH
Trigger: ATGACGATGCGGCCATCTCCAAGCTGCTGGACCGGA...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCATCATCTGTAGCGTCCTaGTTCCGGTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSSSVAS*FRSSSL
Trigger: CAAGCTGCTGGACCGGAACCAGGACGCTACAGATGA...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp TCAGAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCATGGAATATTCTGACTaGTTATCAGAGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: SEPMEYSDWLSESSSCHSMEYSD*LSESSS
Trigger: GGATGAGCTCTCTGATAACCAGTCAGAATATTCCAT...GGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTCTGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGACTGTCCCCTCTGCTGTaGATCAAGCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRLSPLL*IKLSSS
Trigger: GCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAG...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAACTGTCCCCTCTGCTGTaGATCAAGCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKLSPLL*IKLSSS
Trigger: GCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAG...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAACAGGGCCCCGGAAGTTaGGCCCAAAGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKQGPGS*AQSCCC
Trigger: ACAGCAACAACTTTGGGCCCAACTTCCGGGGCCCTG...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAATGGCTCAGCTGGAAATaGGCGCTGCAACACAGGGAA +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQWLSWK*ALQHRE
Trigger: TTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCA...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR TCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGTGGCTCAGCTGGAAATaGGCGCTGCAACACAGGGAA +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKWLSWK*ALQHRE
Trigger: TTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCA...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGTCCTCTTCTCGCTCTTaGCGTCTTCATCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKSSSRS*RLHPQS
Trigger: GCTCTGGGGATGAAGACGGCAAGAGCGAGAAGAGGA...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR GCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGATGTCACCTGGCGGGGTaGTACCGTGCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRCHLAG*YRASSL
Trigger: CAAAGAAGAAGCACGGTAGCACCCCGCCAGGTGACA...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGACGGAACTGTCCCCTCTaGTGTGGATCAAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRRNCPL*CGSSSA
Trigger: AGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCG...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAAGCCTTCTCCAGCTCTaGGTCCAGGCATACGAGATG +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRSLLQL*VQAYEM
Trigger: CATCTCGTATGCCTGGACCCAGAGCTGGAGAAGGCT...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAGCCTTCTCCAGCTCTaGGTCCAGGCATACGAGATG +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQSLLQL*VQAYEM
Trigger: CATCTCGTATGCCTGGACCCAGAGCTGGAGAAGGCT...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGATACTTCTTCTGCATCTaGCTCAGCTCCACCCGGACA +
Preference number: 4 (lower is better)
Translates to: SIRHPTFIKTNVFKSSIGYFFCI*LSSTRT
Trigger: TGTCCGGGTGGAGCTGAGCCAGATGCAGAAGAAGTA...TCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000462991.5
CDS-3UTR CCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAACCAGCAGCTTGGAGATaGCCGCATCGTCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQPAAWR*PHRHSG
Trigger: TCCACTATGACGATGCGGCCATCTCCAAGCTGCTGG...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAATCATCTGTAGCGTCCTaGTTCCGGTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKSSVAS*FRSSSL
Trigger: CAAGCTGCTGGACCGGAACCAGGACGCTACAGATGA...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTATGGAATATTCTGACTaGTTATCAGAGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: INEISSKKSSGKGGEGARMEYSD*LSESSS
Trigger: GGATGAGCTCTCTGATAACCAGTCAGAATATTCCAT...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGATTGTTGCTGTACATCTaGGAGGAGCCGAAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRLLLYI*EEPKAP
Trigger: GGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAA...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAGCAGGTCTTTCCACTTaGTCAGGTAGTGCACATCCC +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKAGLST*SGSAHP
Trigger: GGGATGTGCACTACCTGATCAAGTGGAAAGACCTGC...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAGGACGGTCATCATTTTaGACATGGGGATCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSGRSSF*TWGSSG
Trigger: ACCCGAAGATCCCCATGTCCAAAATGATGACCGTCC...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGACAGTGTAGAATCCGCTaGACTTTGCCCTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRQCRIR*TLPFSG
Trigger: CCCACTGAAGGGCAAAGTCCAGCGGATTCTACACTG...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAAGCCTTGGTGTCATCTaGCCTGAGTTCGGAACTGTC +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRSLGVI*PEFGTV
Trigger: GACAGTTCCGAACTCAGGCCAGATGACACCAAGGCT...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGACTTTTTGTCCCAAGGTaGCGCTGGCTCCTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: SIRHPTFIKTNVFKSSIGLFVPR*RWLLKR
Trigger: CCTTTTTAGGAGCCAGCGCCACCTTGGGACAAAAAG...TCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
CDS-3UTR CCA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAGGACTACCTTGGGTCTaGAACCCATCGGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSGLPWV*NPSVKR
Trigger: TCTCTTTACCGATGGGTTCCAGACCCAAGGTAGTCC...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR GCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAATCGATGTACCATGGCTaGTTGTCGAACTTGACCGTG +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKSMYHG*LSNLTV
Trigger: CACGGTCAAGTTCGACAAGCAGCCATGGTACATCGA...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR GCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAATCATCTCCAGGTAGTTaGCCTTGTGGACCTCAGACT +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQSSPGS*PCGPQT
Trigger: AGTCTGAGGTCCACAAGGGCAACTACCTGGAGATGA...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGATCTTCCCACTCCGAATaGCGTTGTCCTCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: SIRHPTFIKTNVFKSSIGSSHSE*RCPQRK
Trigger: TTTCCTTTGAGGACAACGCCATTCGGAGTGGGAAGA...TCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000462991.5
CDS-3UTR CCA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCATGGCTCCTAAAAAGGTaGCAGCTTTTCTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSWLLKR*QLFSPM
Trigger: CATGGGAGAGAAAAGCTGCCACCTTTTTAGGAGCCA...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
CDS-3UTR CCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGATGGCTCCTAAAAAGGTaGCAGCTTTTCTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRWLLKR*QLFSPM
Trigger: CATGGGAGAGAAAAGCTGCCACCTTTTTAGGAGCCA...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR TCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAACCATCTTCTTCTTCTaGCATCTCGTCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKTIFFF*HLVLIL
Trigger: GAGAATGAGGACGAGATGTCAGAAGAAGAAGATGGT...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR TCA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAGCAGCACGTGGAATTTaGTCTGCACTTCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKAARGI*SALLSS
Trigger: TGAAGAAAGAAGTGCAGATCAAATTCCACGTGCTGC...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR TCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAGCCAATGGAATATTCTaGCTGGTTATCAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQANGIF*LVIREL
Trigger: GAGCTCTCTGATAACCAGTCAGAATATTCCATTGGC...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAGTGTGGAAGAACACTTaGATTATGATGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQVWKNT*IMMRWH
Trigger: GTGCCACCTCATCATAATTCAAGTGTTCTTCCACAC...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR GCA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCATCTTTGTCACCATTTTaGTGTGTTTCAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSSLSPF*CVSMGS
Trigger: GGAGCCCATTGAAACACAGCAAAATGGTGACAAAGA...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR TCA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGACATGCTCAAACTCCTaGACCTTCTTCCTAACTAGT +
Preference number: 4 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKTCSNS*TFFLTS
Trigger: ACTAGTTAGGAAGAAGGTTCAGGAGTTTGAGCATGT...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR GCA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGATCTTTGTCACCATTTTaGTGTGTTTCAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRSLSPF*CVSMGS
Trigger: GGAGCCCATTGAAACACAGCAAAATGGTGACAAAGA...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CCA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAACATCCTCAGAGCCAATaGAATATTCTGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQHPQSQ*NILTGY
Trigger: ATAACCAGTCAGAATATTCCATTGGCTCTGAGGATG...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAGGGTCCCCGGCGCGGTaGGTCAGGCGGCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEGSPAR*VRRLRM
Trigger: CATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCC...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CAA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGTCATGGACCCCGACTaGGAGCCGAGGCCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: KGGEGARPAWLWGQRCVEVMDPD*EPRPGR
Trigger: GCGGCCCGGCCTCGGCTCCAAGTCGGGGTCCATGAC...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS CCA 90 bp GCGGCTGAAGGCCTGAGGCCCGGGATGAGAGGCCCCCTGGGAGGGTaGTGGGCGGCAGCAGCACAGACCTGGATGTCATTGTGCGGGTTC +
Preference number: 5 (lower is better)
Translates to: AAEGLRPGMRGPLGG*WAAAAQTWMSLCGF
Trigger: GAACCCGCACAATGACATCCAGGTCTGTGCTGCTGCCGCCCACCACCCTCCCAGGGGGCCTCTCATCCCGGGCCTCAGGCCTTCAGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CAA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCACCAGCCAGTGGGAGTaGAAGGCGTCCTGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLTSQWE*KASCGG
Trigger: GCCCCCGCAGGACGCCTTCAACTCCCACTGGCTGGT...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp GCCCCCAGGGGCAGCCCGGTTCCACCTCCGGAGGTGGGCAGGGTAGGCATCCCACTCCTCTTGCTCTTCTaGCCCAGGGCTGCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: APRGSPVPPPEVGRVGIPLLLLF*PRAAEH
Trigger: ATGCTCTGCAGCCCTGGGCAAGAAGAGCAAGAGGAG...TGGGATGCCTACCCTGCCCACCTCCGGAGGTGGAACCGGGCTGCCCCTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCGAGAAGCGCAGCCAGTaGAGGCCCTCCAGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCEKRSQ*RPSSWY
Trigger: GTACCAGCTGGAGGGCCTCAACTGGCTGCGCTTCTC...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAACCAGCCAGTGGGAGTaGAAGGCGTCCTGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: KGGEGARPAWLWGQRCVETSQWE*KASCGG
Trigger: GCCCCCGCAGGACGCCTTCAACTCCCACTGGCTGGT...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CTTTCACGGGGGACGCTGCTTCTGCCTCAGGCGTGTATGAGAGGGCCCTGCAGAGGGTCCCCGGCGCGGTaGGTCAGGCGGCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: LSRGTLLLPQACMRGPCRGSPAR*VRRLRM
Trigger: CATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCC...TCTGCAGGGCCCTCTCATACACGCCTGAGGCAGAAGCAGCGTCCCCCGTGAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGGCACGTCCGGCGTGGTaGTGGGGGCAACGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: QPLSSLPWAKTRQATAHRARPAW*WGQRCV
Trigger: CACACAGCGTTGCCCCCACAACCACGCCGGACGTGC...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCCTGAACTCCCGCCACTaGGCACCCAGGACGGTCATC +
Preference number: 5 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLLNSRH*APRTVI
Trigger: GATGACCGTCCTGGGTGCCAAGTGGCGGGAGTTCAG...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACTCACTCCAGGCCCTTaGCCCTCCTTGGTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: GGEGARPAWLWGQRCVEELTPGP*PSLVLA
Trigger: GGCCAAGACCAAGGAGGGCAAAGGGCCTGGAGTGAG...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp AGTCCCAGGCAGGCCCTCTCCAAGGAGCTGAGCCCCAGCCCGTGTGCACCTCCAGAGAAGCGCAGCCAGTaGAGGCCCTCCAGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: SPRQALSKELSPSPCAPPEKRSQ*RPSSWY
Trigger: GTACCAGCTGGAGGGCCTCAACTGGCTGCGCTTCTC...TGGAGGTGCACACGGGCTGGGGCTCAGCTCCTTGGAGAGGGCCTGCCTGGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAATGGGCCCCGGGGGCATaGAATCTGTCGATTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEWAPGA*NLSIAS
Trigger: GGAGGCAATCGACAGATTCAATGCCCCCGGGGCCCA...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GTCTCCTCTGGCCGCTCCTCTCGGGCTCTCTCCTTGCTGGCTGGGCTCTCGTGCAGCTGGGCTTCCATTTaGTCTGGCAGGCCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: VSSGRSSRALSLLAGLSCSWASI*SGRPSG
Trigger: CCCGCTGGGCCTGCCAGACAAAATGGAAGCCCAGCT...GCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAGGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CAA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAATCTCGGGCTCTCTCCTaGCTGGCTGGGCTCTCGTGC +
Preference number: 5 (lower is better)
Translates to: KGGEGARPAWLWGQRCVESRALS*LAGLSC
Trigger: GCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGA...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAATGGGTGAGCATCATCTaGCGCTTGGCCACCTGCGTG +
Preference number: 5 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEWVSII*RLATCV
Trigger: CACGCAGGTGGCCAAGCGCAAGATGATGCTCACCCA...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGCTGTCCTCCACGTCCTaGTTGTCACCTGGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: RTARYLLDGGVPGAVGQALSSTS*LSPGGV
Trigger: CACCCCGCCAGGTGACAACAAGGACGTGGAGGACAG...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp GTCTCCTCTGGCCGCTCCTCTCGGGCTCTCTCCTTGCTGGCTGGGCTCTCGTGCTTCCGGTCCAGCAGCTaGGAGATGGCCGCATCGTCA +
Preference number: 5 (lower is better)
Translates to: VSSGRSSRALSLLAGLSCFRSSS*EMAASS
Trigger: TGACGATGCGGCCATCTCCAAGCTGCTGGACCGGAA...GCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGAGGAGCGGCCAGAGGAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CAA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGGGGTCCCCGGCGCGGTaGGTCAGGCGGCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWGSPAR*VRRLRM
Trigger: CATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCC...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CAA 90 bp GCCCCCAGGGGCAGCCCGGTTCCACCTCCGGAGGTGGGCAGGGTAGGCATCCCATTGGGCCCAAAGTTGTaGCTGTACATCTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: APRGSPVPPPEVGRVGIPLGPKL*LYIWEE
Trigger: CTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAA...TGGGATGCCTACCCTGCCCACCTCCGGAGGTGGAACCGGGCTGCCCCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACAGCTTCTTGCCCTTCTaGAGCAGCCTCTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GEGARPAWLWGQRCVEEHSFLPF*SSLLGS
Trigger: GCTGCCCAAGAGGCTGCTCAAGAAGGGCAAGAAGCT...GTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGGCGGCTTCTCCTGCTaGTCGTCCCTCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: KGGEGARPAWLWGQRCVEGGFSC*SSLSFL
Trigger: CAAGAAGCTGAGGGACGACAAGCAGGAGAAGCCGCC...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCTTGAACACGTCAGCCTaGAGCCGCCTGAGCATGTGC +
Preference number: 5 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLLNTSA*SRLSMC
Trigger: GCACATGCTCAGGCGGCTCAAGGCTGACGTGTTCAA...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGTGGGTGAGCATCATCTaGCGCTTGGCCACCTGCGTG +
Preference number: 5 (lower is better)
Translates to: RTARYLLDGGVPGAVGQAWVSII*RLATCV
Trigger: CACGCAGGTGGCCAAGCGCAAGATGATGCTCACCCA...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp ACGTCGTCCTTGAAGAGTTCCTCCGTGCCGAACTTGAGGATGTCGTCCAGCTCCGTCATGGACCCCGACTaGGAGCCGAGGCCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: TSSLKSSSVPNLRMSSSSVMDPD*EPRPGR
Trigger: GCGGCCCGGCCTCGGCTCCAAGTCGGGGTCCATGAC...GGAGCTGGACGACATCCTCAAGTTCGGCACGGAGGAACTCTTCAAGGACGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CAA 90 bp GCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGTCGTCCAGCTCCTGCTaGGTCATGGACCCCGACTTG +
Preference number: 5 (lower is better)
Translates to: ARYLLDGGVPGAVGQAAQSSSSC*VMDPDL
Trigger: CAAGTCGGGGTCCATGACCAAGCAGGAGCTGGACGA...CTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGTCCTCCACGTCCTTGTaGTCACCTGGCGGGGTGCTA +
Preference number: 5 (lower is better)
Translates to: RTARYLLDGGVPGAVGQASSTSL*SPGGVL
Trigger: TAGCACCCCGCCAGGTGACAACAAGGACGTGGAGGA...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CAGCCTCTGTCCAGCCTCCCGTGGGCGAAGACCAGACAAGCCACGGCTCACAGGTTCCGGTCCAGCAGCTaGGAGATGGCCGCATCGTCA +
Preference number: 5 (lower is better)
Translates to: QPLSSLPWAKTRQATAHRFRSSS*EMAASS
Trigger: TGACGATGCGGCCATCTCCAAGCTGCTGGACCGGAA...CCTGTGAGCCGTGGCTTGTCTGGTCTTCGCCCACGGGAGGCTGGACAGAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTCGGATGCGCTTGCCCTaGCCCAGGTTGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AGARCRRFSQRIQQPAPRRMRLP*PRLRAR
Trigger: CCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCCG...ACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp ACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTCTCTGCTTGCGGATGCGCTaGCCCTTGCCCAGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: TLQLPPGLSSSTLPFRPLCLRMR*PLPRLR
Trigger: CCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGCA...GAGAGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CAA 90 bp ACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCCTCTCCAGCTGCCTCCGGGATaGTCGTCGTCCACTCTGCCC +
Preference number: 5 (lower is better)
Translates to: TLQLPPGLSSSTLPFRPLQLPPG*SSSTLP
Trigger: GGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTG...GAGAGGCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CAA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAGCTGGGCTCTCGTGCTaGTCCTCACTCTCCACTCTA +
Preference number: 5 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEAGLSC*SSLSTL
Trigger: TAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGC...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTGCCATGGCGGGGTGGTaGGGGTCCTGCGTCATGTTC +
Preference number: 5 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSAMAGW*GSCVMF
Trigger: GAACATGACGCAGGACCCCAACCACCCCGCCATGGC...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTAGGCCGAGGCGGGCCTaGCACAGAAGAGACTTGGGG +
Preference number: 5 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSRPRRA*HRRDLG
Trigger: CCCCAAGTCTCTTCTGTGCAAGGCCCGCCTCGGCCT...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS GCA 90 bp GCCCAAGAGAAGCGCAGCCAGTTGAGGCCCTCCAGCTGGTACGGGTaGAGTGTGCCGCCTGTGGAGTCGATGTACCATGGCTGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: AQEKRSQLRPSSWYG*SVPPVESMYHGCLS
Trigger: CGACAAGCAGCCATGGTACATCGACTCCACAGGCGGCACACTGCACCCGTACCAGCTGGAGGGCCTCAACTGGCTGCGCTTCTCTTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GTTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGCCGCGGAGCTGCCCTaGAAGGGGTTGTTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: VGPKVVAVHLGGAESALLAAELP*KGLLAL
Trigger: CAGCGCCAACAACCCCTTCAAGGGCAGCTCCGCGGC...CAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCCCCCGAAGCGGAACTaGAGCCCGGCCGTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSPPKRN*SPAVFF
Trigger: GAAAAAGACGGCCGGGCTCAAGTTCCGCTTCGGGGG...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp AGGACGGCTAGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGAGCTTCTTGCCCTTCTaGAGCAGCCTCTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RTARYLLDGGVPGAVGQASFLPF*SSLLGS
Trigger: GCTGCCCAAGAGGCTGCTCAAGAAGGGCAAGAAGCT...CGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCTAGCCGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462991.5
CDS-3UTR CAA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAAAGCCCTCCAGGTTGTaGAACCTCTCTGGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEKPSRL*NLSGVR
Trigger: CCTGACTCCAGAGAGGTTCAACAACCTGGAGGGCTT...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCTTGGCCGGCATGTTCTaGAACACGTCAGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLLAGMF*NTSALS
Trigger: GCTCAAGGCTGACGTGTTCAAGAACATGCCGGCCAA...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TGGCAGCTTTTCTCTCCCATGTGGGTCGGGCAGGTGGCCCGGCAGGCGTGGCTCAGCTTCCCTGAAGACTaGACCAGGGAGCTTCCATCG +
Preference number: 5 (lower is better)
Translates to: WQLFSPMWVGQVARQAWLSFPED*TRELPS
Trigger: CGATGGAAGCTCCCTGGTCAAGTCTTCAGGGAAGCT...GAGCCACGCCTGCCGGGCCACCTGCCCGACCCACATGGGAGAGAAAAGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCTCGTCCAGCTCCTGCTaGGTCATGGACCCCGACTTG +
Preference number: 5 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPSSSSC*VMDPDL
Trigger: CAAGTCGGGGTCCATGACCAAGCAGGAGCTGGACGA...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp AGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATTTCCGGTCCAGCAGCTaGGAGATGGCCGCATCGTCA +
Preference number: 5 (lower is better)
Translates to: RYLLDGGVPGAVGQAAQDFRSSS*EMAASS
Trigger: TGACGATGCGGCCATCTCCAAGCTGCTGGACCGGAA...ATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTGCTTGCGGATGCGCTaGCCCTTGCCCAGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNCLRMR*PLPRLR
Trigger: CCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGCA...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp AGTCCCAGGCAGGCCCTCTCCAAGGAGCTGAGCCCCAGCCCGTGTGCACCTCCAACTAGGTTTCCCTTTTaGTCCCAAGGTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: SPRQALSKELSPSPCAPPTRFPF*SQGGAG
Trigger: GCCAGCGCCACCTTGGGACAAAAAGGGAAACCTAGT...TGGAGGTGCACACGGGCTGGGGCTCAGCTCCTTGGAGAGGGCCTGCCTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTGCACGTCCGGCGTGGTaGTGGGGGCAACGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGARPAW*WGQRCV
Trigger: CACACAGCGTTGCCCCCACAACCACGCCGGACGTGC...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS TCA 90 bp CGTTCTCCCGAATCACCGAGCGGCTCTCCTTGTCCCCCGTGTAGGTaGCCACGTAGAAGTCGGGCGCCCACATCTCAAACTCGCGTTCCC +
Preference number: 5 (lower is better)
Translates to: RSPESPSGSPCPPCR*PRRSRAPTSQTRVP
Trigger: GGGAACGCGAGTTTGAGATGTGGGCGCCCGACTTCTACGTGGTCACCTACACGGGGGACAAGGAGAGCCGCTCGGTGATTCGGGAGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS GCA 90 bp TGGTACGGGTGCAGTGTGCCGCCTGTGGAGTCGATGTACCATGGCTaGTTGTCGAACTTGACCGTGGGGTCCACAATGGGCGTGTCCGGC +
Preference number: 5 (lower is better)
Translates to: WYGCSVPPVESMYHG*LSNLTVGSTMGVSG
Trigger: GCCGGACACGCCCATTGTGGACCCCACGGTCAAGTTCGACAAGCAGCCATGGTACATCGACTCCACAGGCGGCACACTGCACCCGTACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS CCA 90 bp CCAGGGCTGCAGAGCATTCGGAGCGCACGGAGGCACTGTGGATGCTaGCGCTGTCGAAGTCCGACTCCTCCCTCTCATCTTCTTCACTCG +
Preference number: 5 (lower is better)
Translates to: PGLQSIRSARRHCGC*RCRSPTPPSHLLHS
Trigger: CGAGTGAAGAAGATGAGAGGGAGGAGTCGGACTTCGACAGCGCCAGCATCCACAGTGCCTCCGTGCGCTCCGAATGCTCTGCAGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTGGGAGCTCGCCCCCGTCCTaGCACACGCGGCAGAACTCC +
Preference number: 5 (lower is better)
Translates to: SGGVGGIPTTHMWEDGFGSSPPS*HTRQNS
Trigger: GGAGTTCTGCCGCGTGTGCAAGGACGGGGGCGAGCT...CCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp AGTCCCAGGCAGGCCCTCTCCAAGGAGCTGAGCCCCAGCCCGTGTGCACCTCCACCACTCCGAATGGCGTaGTCCTCAAAGGAAAACTCG +
Preference number: 5 (lower is better)
Translates to: SPRQALSKELSPSPCAPPPLRMA*SSKENS
Trigger: CGAGTTTTCCTTTGAGGACAACGCCATTCGGAGTGG...TGGAGGTGCACACGGGCTGGGGCTCAGCTCCTTGGAGAGGGCCTGCCTGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTGGGCCCCGGGGGCATaGAATCTGTCGATTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNWAPGA*NLSIAS
Trigger: GGAGGCAATCGACAGATTCAATGCCCCCGGGGCCCA...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTCATGGACCCCGACTaGGAGCCGAGGCCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDEVMDPD*EPRPGR
Trigger: GCGGCCCGGCCTCGGCTCCAAGTCGGGGTCCATGAC...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCGGCTCGTCCAGCTCCTGCTaGGTCATGGACCCCGACTTG +
Preference number: 5 (lower is better)
Translates to: LSLFSCLRDCRRPLCPSGSSSSC*VMDPDL
Trigger: CAAGTCGGGGTCCATGACCAAGCAGGAGCTGGACGA...GCCGGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CAA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTTCCTCCGTGCCGAACTaGAGGATGTCGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSSSVPN*RMSSSS
Trigger: GGAGCTGGACGACATCCTCAAGTTCGGCACGGAGGA...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATCCCTCCACGTCGTCCTaGAAGAGTTCCTCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNPSTSS*KSSSVP
Trigger: CGGCACGGAGGAACTCTTCAAGGACGACGTGGAGGG...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp TTGGTGTCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCCGGATGCGCTTGCCCTaGCCCAGGTTGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LVSSGLSSELSPLLWIKLRMRLP*PRLRAR
Trigger: CCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCCG...GAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGACACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp TCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCAGCTGCTTGCGGATGCGCTaGCCCTTGCCCAGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: SGLSSELSPLLWIKLSSSCLRMR*PLPRLR
Trigger: CCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGCA...GCTGGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTCAGCTGCCTCCGGGATaGTCGTCGTCCACTCTGCCC +
Preference number: 5 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGQLPPG*SSSTLP
Trigger: GGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTG...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGCGGGCACTGGTGTGTaGGGGTCCGAGGAGATCACC +
Preference number: 5 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCAGTGV*GSEEIT
Trigger: GGTGATCTCCTCGGACCCCAACACACCAGTGCCCGC...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTATCTCGGGCTCTCTCCTaGCTGGCTGGGCTCTCGTGC +
Preference number: 5 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLSRALS*LAGLSC
Trigger: GCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGA...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTCTCGGGCTCTCTCCTaGCTGGCTGGGCTCTCGTGC +
Preference number: 5 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWSRALS*LAGLSC
Trigger: GCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGA...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAAAAGCTCAGCTCCAGCTaGTCCAGGATCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEKLSSS*SRIFSF
Trigger: GAAGGAGAAGATCCTGGACAAGCTGGAGCTGAGCTT...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAATTGTGGACCTCAGACTaGAAGGGCTCGTTGAGGATC +
Preference number: 5 (lower is better)
Translates to: GGEGARPAWLWGQRCVEELWTSD*KGSLRI
Trigger: GATCCTCAACGAGCCCTTCAAGTCTGAGGTCCACAA...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTGCCATGGCGGGGTGGTaGGGGTCCTGCGTCATGTTC +
Preference number: 5 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGAMAGW*GSCVMF
Trigger: GAACATGACGCAGGACCCCAACCACCCCGCCATGGC...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp AGATATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATAGCTGGTTCAGGACCTaGTGCAGGACGGCATTGGCA +
Preference number: 5 (lower is better)
Translates to: RYLLDGGVPGAVGQAAQDSWFRT*CRTALA
Trigger: TGCCAATGCCGTCCTGCACAAGGTCCTGAACCAGCT...ATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGGGTCCCCGGCGCGGTaGGTCAGGCGGCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDGSPAR*VRRLRM
Trigger: CATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCC...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CAA 90 bp TATCTGCTGGATGGTGGGGTCCCCGGCGCGGTTGGTCAGGCGGCTCAGGATGCTACTAGGTTTCCCTTTTaGTCCCAAGGTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: YLLDGGVPGAVGQAAQDATRFPF*SQGGAG
Trigger: GCCAGCGCCACCTTGGGACAAAAAGGGAAACCTAGT...AGCATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCCCACCATCCAGCAGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACAGGGTCGGGCTGGCCTaGCAGACCTGGATCCAGACT +
Preference number: 5 (lower is better)
Translates to: PSPSGFWLPCTRAHSPLHRVGLA*QTWIQT
Trigger: AGTCTGGATCCAGGTCTGCAAGGCCAGCCCGACCCT...GTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTGGGCCGAGCCAGGACCCTTaGCCAGGAGGCACCGCAGAG +
Preference number: 5 (lower is better)
Translates to: SGGVGGIPTTHMWEDGFGPSQDP*PGGTAE
Trigger: CTCTGCGGTGCCTCCTGGCAAAGGGTCCTGGCTCGG...CCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TGTCCCCTGCCCACAGACCCTGACGCACACTGGAGGCTCCAAGTGACCGACACTAGTGCTTGCCACTGCTaGTTTGGGGACGAGGGCACG +
Preference number: 5 (lower is better)
Translates to: CPLPTDPDAHWRLQVTDTSACHC*FGDEGT
Trigger: CGTGCCCTCGTCCCCAAACAAGCAGTGGCAAGCACT...AGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCAGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGACCAAGTGACCGACACTaGACCAAGTCCATCTGGCTT +
Preference number: 5 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRPSDRH*TKSIWL
Trigger: AAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGG...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS CCA 90 bp TTCTTGCCCAGGGCTGCAGAGCATTCGGAGCGCACGGAGGCACTGTaGATGCTGGCGCTGTCGAAGTCCGACTCCTCCCTCTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: FLPRAAEHSERTEAL*MLALSKSDSSLSSS
Trigger: AGAAGATGAGAGGGAGGAGTCGGACTTCGACAGCGCCAGCATCCACAGTGCCTCCGTGCGCTCCGAATGCTCTGCAGCCCTGGGCAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS CCA 90 bp CAGCTGGTACGGGTGCAGTGTGCCGCCTGTGGAGTCGATGTACCATaGCTGCTTGTCGAACTTGACCGTGGGGTCCACAATGGGCGTGTC +
Preference number: 5 (lower is better)
Translates to: QLVRVQCAACGVDVP*LLVELDRGVHNGRV
Trigger: GACACGCCCATTGTGGACCCCACGGTCAAGTTCGACAAGCAGCCATGGTACATCGACTCCACAGGCGGCACACTGCACCCGTACCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp AAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAAGGACGGTCATCATTTaGGACATGGGGATCTTCGGG +
Preference number: 5 (lower is better)
Translates to: KGGEGARPAWLWGQRCVERTVII*DMGIFG
Trigger: CCCGAAGATCCCCATGTCCAAAATGATGACCGTCCT...TTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp CCTCCAGGCAGAACTCTCCCCACGCCTTCCAAGAGTGCAGCCTCAGGCAAAAAGCCCCCGAAGCGGAACTaGAGCCCGGCCGTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: PPGRTLPTPSKSAASGKKPPKRN*SPAVFF
Trigger: GAAAAAGACGGCCGGGCTCAAGTTCCGCTTCGGGGG...CTTTTTGCCTGAGGCTGCACTCTTGGAAGGCGTGGGGAGAGTTCTGCCTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTTCGTCCCTCAGCTTCTaGCCCTTCTTGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSSSLSF*PFLSSL
Trigger: GAGGCTGCTCAAGAAGGGCAAGAAGCTGAGGGACGA...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCATGTACCATGGCTGCTaGTCGAACTTGACCGTGGGG +
Preference number: 5 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPMYHGC*SNLTVG
Trigger: CCCCACGGTCAAGTTCGACAAGCAGCCATGGTACAT...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGATGGTCTGCACCGTCTaGCCCAGACCCATCTCATCG +
Preference number: 5 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGMVCTV*PRPISS
Trigger: CGATGAGATGGGTCTGGGCAAGACGGTGCAGACCAT...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TGTCCCCTGCCCACAGACCCTGACGCACACTGGAGGCTCCAAGTGACCGACACTTTGAACACGTCAGCCTaGAGCCGCCTGAGCATGTGC +
Preference number: 5 (lower is better)
Translates to: CPLPTDPDAHWRLQVTDTLNTSA*SRLSMC
Trigger: GCACATGCTCAGGCGGCTCAAGGCTGACGTGTTCAA...AGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCAGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCAGCTTCCCTGAAGACTaGACCAGGGAGCTTCCATCG +
Preference number: 5 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPSFPED*TRELPS
Trigger: CGATGGAAGCTCCCTGGTCAAGTCTTCAGGGAAGCT...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCTTCCGGTCCAGCAGCTaGGAGATGGCCGCATCGTCA +
Preference number: 5 (lower is better)
Translates to: SLSLFSCLRDCRRPLCPSFRSSS*EMAASS
Trigger: TGACGATGCGGCCATCTCCAAGCTGCTGGACCGGAA...GGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CAA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCGGATGCGCTTGCCCTaGCCCAGGTTGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: EHLNYDEVALLGSGPAELRMRLP*PRLRAR
Trigger: CCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCCG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp TCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCCAGCTGCCTCCGGGATaGTCGTCGTCCACTCTGCCC +
Preference number: 5 (lower is better)
Translates to: SSGLSSELSPLLWIKLSSQLPPG*SSSTLP
Trigger: GGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTG...GGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CTCTCCTTGCTGGCTGGGCTCTCGTGCTTGTCCTCACTCTCCACTCTATCCAAGGCGGGCACTGGTGTGTaGGGGTCCGAGGAGATCACC +
Preference number: 5 (lower is better)
Translates to: LSLLAGLSCLSSLSTLSKAGTGV*GSEEIT
Trigger: GGTGATCTCCTCGGACCCCAACACACCAGTGCCCGC...CTTGGATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CAA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTCTCGGGCTCTCTCCTaGCTGGCTGGGCTCTCGTGC +
Preference number: 5 (lower is better)
Translates to: EISNRRLALWARVHARGPSRALS*LAGLSC
Trigger: GCACGAGAGCCCAGCCAGCAAGGAGAGAGCCCGAGA...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGACCCCCGTCCGCGATGTaGAACATGAACTTGAATTTC +
Preference number: 5 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRPPSAM*NMNLNF
Trigger: GAAATTCAAGTTCATGTTCAACATCGCGGACGGGGG...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp CGAGGACGGCTAGATATCGGTCACATAGGGCCCCAGGGGCATCTGGTTGTAGTTGCCATGGCGGGGTGGTaGGGGTCCTGCGTCATGTTC +
Preference number: 5 (lower is better)
Translates to: RGRLDIGHIGPQGHLVVVAMAGW*GSCVMF
Trigger: GAACATGACGCAGGACCCCAACCACCCCGCCATGGC...AACTACAACCAGATGCCCCTGGGGCCCTATGTGACCGATATCTAGCCGTCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGGGGTCCCCGGCGCGGTaGGTCAGGCGGCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: EEHLNYDEVALLGSGPAEGSPAR*VRRLRM
Trigger: CATCCTGAGCCGCCTGACCAACCGCGCCGGGGACCC...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CAA 90 bp TCCCAGTACAAGACTCAGAAACGCCTTCCAGGTCGACCTGGGGCCAGGAGAAGGCCAGGGCCCCGGAAGTaGGGCCCAAAGTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: SQYKTQKRLPGRPGARRRPGPRK*GPKLLL
Trigger: CAGCAACAACTTTGGGCCCAACTTCCGGGGCCCTGG...CCTTCTCCTGGCCCCAGGTCGACCTGGAAGGCGTTTCTGAGTCTTGTACTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTACCAGGGCCCCGGAAGTaGGGCCCAAAGTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLPGPRK*GPKLLL
Trigger: CAGCAACAACTTTGGGCCCAACTTCCGGGGCCCTGG...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp GCCCCCAGGGGCAGCCCGGTTCCACCTCCGGAGGTGGGCAGGGTAGGCATCCCATGTGTGGAAGAACACTaGAATTATGATGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: APRGSPVPPPEVGRVGIPCVEEH*NYDEVA
Trigger: TGCCACCTCATCATAATTCAAGTGTTCTTCCACACA...TGGGATGCCTACCCTGCCCACCTCCGGAGGTGGAACCGGGCTGCCCCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TGTCCCCTGCCCACAGACCCTGACGCACACTGGAGGCTCCAAGTGACCGACACTAGTGCCAGGACTACCTaGGGTCTGGAACCCATCGGT +
Preference number: 5 (lower is better)
Translates to: CPLPTDPDAHWRLQVTDTSARTT*GLEPIG
Trigger: ACCGATGGGTTCCAGACCCAAGGTAGTCCTGGCACT...AGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCAGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp ATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGCTTGCCACTGCTTGTTaGGGGACGAGGGCACGGGAG +
Preference number: 5 (lower is better)
Translates to: ISSKKSSGKGGEGARPAWLATAC*GTRARE
Trigger: CTCCCGTGCCCTCGTCCCCAAACAAGCAGTGGCAAG...CCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS GCA 90 bp AACTTGACCGTGGGGTCCACAATGGGCGTGTCCGGCGGCTTCTCCTaGTTGTCGTCCCTCAGCTTCTTGCCCTTCTTGAGCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: NLTVGSTMGVSGGFS*LSSLSFLPFLSSLL
Trigger: CAAGAGGCTGCTCAAGAAGGGCAAGAAGCTGAGGGACGACAAGCAGGAGAAGCCGCCGGACACGCCCATTGTGGACCCCACGGTCAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACCATCTTTGGAGCCTTaGATCTTCTTCCTCACTCCA +
Preference number: 5 (lower is better)
Translates to: GGEGARPAWLWGQRCVEEPSLEP*IFFLTP
Trigger: TGGAGTGAGGAAGAAGATCAAAGGCTCCAAAGATGG...TTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGAGCTCGCCCCCGTCCTaGCACACGCGGCAGAACTCC +
Preference number: 5 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDESSPPS*HTRQNS
Trigger: GGAGTTCTGCCGCGTGTGCAAGGACGGGGGCGAGCT...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp TCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACCTCCTTGGGTTCCTCTTCTCGCTCTaGCCGTCTTCATCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SGFWLPCTRAHSPLHLLGFLFSL*PSSSPE
Trigger: CTCTGGGGATGAAGACGGCAAGAGCGAGAAGAGGAA...CCCAAGGAGGTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TCCAGGGCCCCGGAAGTTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCAGCTTCTTGCCCTTCTaGAGCAGCCTCTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SRAPEVGPKVVAVHLGGASFLPF*SSLLGS
Trigger: GCTGCCCAAGAGGCTGCTCAAGAAGGGCAAGAAGCT...GGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAACTTCCGGGGCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATATGGTCTGCACCGTCTaGCCCAGACCCATCTCATCG +
Preference number: 5 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNMVCTV*PRPISS
Trigger: CGATGAGATGGGTCTGGGCAAGACGGTGCAGACCAT...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp CCTCCAGGCAGAACTCTCCCCACGCCTTCCAAGAGTGCAGCCTCAGGCAAAAAGTGGGTGAGCATCATCTaGCGCTTGGCCACCTGCGTG +
Preference number: 5 (lower is better)
Translates to: PPGRTLPTPSKSAASGKKWVSII*RLATCV
Trigger: CACGCAGGTGGCCAAGCGCAAGATGATGCTCACCCA...CTTTTTGCCTGAGGCTGCACTCTTGGAAGGCGTGGGGAGAGTTCTGCCTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TGGCCCGGCAGGCGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTTACCGTGCTTCTTCTTaGCACTGGCGGCCAAGTTCC +
Preference number: 5 (lower is better)
Translates to: WPGRRGSAGNERCNTGKSYRASS*HWRPSS
Trigger: GGAACTTGGCCGCCAGTGCAAAGAAGAAGCACGGTA...AGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACGCCTGCCGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp AGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCTGTCCTCCACGTCCTaGTTGTCACCTGGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: SDRHLTKSIWLLAPMYPSLSSTS*LSPGGV
Trigger: CACCCCGCCAGGTGACAACAAGGACGTGGAGGACAG...GCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATACGTACTGCGCCACCTaGAAGGAGCTCAGGTACTCG +
Preference number: 5 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNTYCAT*KELRYS
Trigger: CGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACGT...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp TCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCTTCCACGTACTGCGCCACCTaGAAGGAGCTCAGGTACTCG +
Preference number: 5 (lower is better)
Translates to: SLSLFSCLRDCRRPLCPSTYCAT*KELRYS
Trigger: CGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACGT...GGAAGGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CAA 90 bp TGGCCAGGCTTTCCTGGGTGCCCGAGTCTAACCAGGCAGAGGAGAAGGGAGCCCAAGCTCAGCTCCAGCTaGTCCAGGATCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: WPGFPGCPSLTRQRRREPKLSSS*SRIFSF
Trigger: GAAGGAGAAGATCCTGGACAAGCTGGAGCTGAGCTT...GGGCTCCCTTCTCCTCTGCCTGGTTAGACTCGGGCACCCAGGAAAGCCTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp CCGAGGAGATCACCTCGCCCGACTTCTTCCCCTCGGGCCCCTCAGGGATCAAGTAAGCTCAGCTCCAGCTaGTCCAGGATCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PRRSPRPTSSPRAPQGSSKLSSS*SRIFSF
Trigger: GAAGGAGAAGATCCTGGACAAGCTGGAGCTGAGCTT...ACTTGATCCCTGAGGGGCCCGAGGGGAAGAAGTCGGGCGAGGTGATCTCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CAA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGGCACGTCCGGCGTGGTaGTGGGGGCAACGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: EHLNYDEVALLGSGPAELARPAW*WGQRCV
Trigger: CACACAGCGTTGCCCCCACAACCACGCCGGACGTGC...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CAA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATCAAGGCAGCAAGCCCTaGGTGCTGCGGCTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDQGSKP*VLRLGG
Trigger: CCCTCCCAGCCGCAGCACCAAGGGCTTGCTGCCTTG...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTGGGTCGCAGACTGGCACTTaGGGCTCGCGTTCATGCCCG +
Preference number: 5 (lower is better)
Translates to: SGGVGGIPTTHMWEDGFGSQTGT*GSRSCP
Trigger: CGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGA...CCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGAGCTGGGCTTCCATTTaGTCTGGCCGATGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPSWASI*SGRCGG
Trigger: CCCACCGCATCGGCCAGACAAAATGGAAGCCCAGCT...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTCTCCTCTTGCTCTTCTaGCCCAGGGCTGCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGLLLLF*PRAAEH
Trigger: ATGCTCTGCAGCCCTGGGCAAGAAGAGCAAGAGGAG...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGTTCTTGCGCCTCCTCTaGCTCTTCTTGCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPFLRLL*LFLPRA
Trigger: AGCCCTGGGCAAGAAGAGCAAGAGGAGGCGCAAGAA...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp GTTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGTCGTCCCTCAGCTTCTaGCCCTTCTTGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: VGPKVVAVHLGGAESALLSSLSF*PFLSSL
Trigger: GAGGCTGCTCAAGAAGGGCAAGAAGCTGAGGGACGA...CAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp TCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCTCCTCCGTGCCGAACTaGAGGATGTCGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSGLSSELSPLLWIKLSSSSVPN*RMSSSS
Trigger: GGAGCTGGACGACATCCTCAAGTTCGGCACGGAGGA...GGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp GAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCTGGCGGATGCGCTTGCCCTaGCCCAGGTTGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: EPMEYSDWLSESSSCHSWRMRLP*PRLRAR
Trigger: CCTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCCG...CCAGGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CAA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGGCGGGCACTGGTGTGTaGGGGTCCGAGGAGATCACC +
Preference number: 5 (lower is better)
Translates to: EHLNYDEVALLGSGPAELAGTGV*GSEEIT
Trigger: GGTGATCTCCTCGGACCCCAACACACCAGTGCCCGC...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTAGCTGGGCTTCCATTTaGTCTGGCAGGCCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSSWASI*SGRPSG
Trigger: CCCGCTGGGCCTGCCAGACAAAATGGAAGCCCAGCT...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGTTGGGCCCAAAGTTGTaGCTGTACATCTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGLGPKL*LYIWEE
Trigger: CTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAA...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp GCGGGGTGGTTGGGGTCCTGCGTCATGTTCAGGTACGCGGCCCTCCGGAGCTGCTGTGTGGAAGAACACTaGAATTATGATGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: AGWLGSCVMFRYAALRSCCVEEH*NYDEVA
Trigger: TGCCACCTCATCATAATTCAAGTGTTCTTCCACACA...GCAGCTCCGGAGGGCCGCGTACCTGAACATGACGCAGGACCCCAACCACCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS GCA 90 bp CATAGCCGTCACCATCATCAATCCTCTTCTTCTTGCGCCTCCTCTTaGTCTTCTTGCCCAGGGCTGCAGAGCATTCGGAGCGCACGGAGG +
Preference number: 5 (lower is better)
Translates to: HSRHHHQSSSSCASS*SSCPGLQSIRSARR
Trigger: CCTCCGTGCGCTCCGAATGCTCTGCAGCCCTGGGCAAGAAGAGCAAGAGGAGGCGCAAGAAGAAGAGGATTGATGATGGTGACGGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp GACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTGATTCTACCAGCAGCATCTTCGGGTTCTTCTaGGCAATGAGTGGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: DWHFGLAFMPEDPDSTSSIFGFF*AMSGLR
Trigger: CCTCAGGCCACTCATTGCCAAGAAGAACCCGAAGAT...GCTGCTGGTAGAATCAGGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGCTGAACTCCCGCCACTaGGCACCCAGGACGGTCATC +
Preference number: 5 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDELNSRH*APRTVI
Trigger: GATGACCGTCCTGGGTGCCAAGTGGCGGGAGTTCAG...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGCTCACTCCAGGCCCTTaGCCCTCCTTGGTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDELTPGP*PSLVLA
Trigger: GGCCAAGACCAAGGAGGGCAAAGGGCCTGGAGTGAG...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCTTCTTGCGCCTCCTCTaGCTCTTCTTGCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: EISNRRLALWARVHARGPFLRLL*LFLPRA
Trigger: AGCCCTGGGCAAGAAGAGCAAGAGGAGGCGCAAGAA...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp ATGTCAGGGCGCTCCTGGCAGGAAACAAGGCAGCAAGCCCTTGGTGCTGCGGCTTGCACATCCCCCTTCTaGTCAAAGCTATGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: MSGRSWQETRQQALGAAACTSPF*SKLWFR
Trigger: CCTGAACCATAGCTTTGACAAGAAGGGGGATGTGCA...AGCCGCAGCACCAAGGGCTTGCTGCCTTGTTTCCTGCCAGGAGCGCCCTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GAAATTTCCAATCGCAGACTGGCACTTTGGGCTCGCGTTCATGCCCGAGGACCCGGCTGCTTGTCGAACTaGACCGTGGGGTCCACAATG +
Preference number: 5 (lower is better)
Translates to: EISNRRLALWARVHARGPGCLSN*TVGSTM
Trigger: CATTGTGGACCCCACGGTCAAGTTCGACAAGCAGCC...GGGTCCTCGGGCATGAACGCGAGCCCAAAGTGCCAGTCTGCGATTGGAAATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TCATCTGGCCTGAGTTCGGAACTGTCCCCTCTGCTGTGGATCAAGCTCAGCTCCGGCTGCTTGTCGAACTaGACCGTGGGGTCCACAATG +
Preference number: 5 (lower is better)
Translates to: SSGLSSELSPLLWIKLSSGCLSN*TVGSTM
Trigger: CATTGTGGACCCCACGGTCAAGTTCGACAAGCAGCC...GGAGCTGAGCTTGATCCACAGCAGAGGGGACAGTTCCGAACTCAGGCCAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462991.5
CDS-3UTR CAA 90 bp TTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGATGGTGGGGTCCCCACTCCGAATGGCGTaGTCCTCAAAGGAAAACTCG +
Preference number: 5 (lower is better)
Translates to: LLLYIWEEPKAPCWMVGSPLRMA*SSKENS
Trigger: CGAGTTTTCCTTTGAGGACAACGCCATTCGGAGTGG...GGACCCCACCATCCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTAAGCCCTCCAGGTTGTaGAACCTCTCTGGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCKPSRL*NLSGVR
Trigger: CCTGACTCCAGAGAGGTTCAACAACCTGGAGGGCTT...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGAGGAAGCCCTCCAGGTaGTTGAACCTCTCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPRKPSR*LNLSGV
Trigger: GACTCCAGAGAGGTTCAACAACCTGGAGGGCTTCCT...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp CGTGGCTCAGCTGGAAATGAGCGCTGCAACACAGGGAAGTCTCGAGGACGGCTAAGCTTCCCTGAAGACTaGACCAGGGAGCTTCCATCG +
Preference number: 5 (lower is better)
Translates to: RGSAGNERCNTGKSRGRLSFPED*TRELPS
Trigger: CGATGGAAGCTCCCTGGTCAAGTCTTCAGGGAAGCT...TAGCCGTCCTCGAGACTTCCCTGTGTTGCAGCGCTCATTTCCAGCTGAGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TCTACCAGCAGCAAAAACCAAACCCAGCCCAAAGACGCCAAACATACGGACACCCAGCTGCCTCCGGGATaGTCGTCGTCCACTCTGCCC +
Preference number: 5 (lower is better)
Translates to: STSSKNQTQPKDAKHTDTQLPPG*SSSTLP
Trigger: GGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTG...GGTGTCCGTATGTTTGGCGTCTTTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGCCCAGCACCTCGATGTaGCCACCAACTCGGGCGAGA +
Preference number: 5 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPEPSTSM*PPTRAR
Trigger: TCTCGCCCGAGTTGGTGGCAACATCGAGGTGCTGGG...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp GGCTCTCTCCTTGCTGGCTGGGCTCTCGTGCTTGTCCTCACTCTCCACTCTATCGACTTGAAGGGCTCGTaGAGGATCATGTACCGTGGG +
Preference number: 5 (lower is better)
Translates to: GSLLAGWALVLVLTLHSIDLKGS*RIMYRG
Trigger: CCCACGGTACATGATCCTCAACGAGCCCTTCAAGTC...GATAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGCCAGCAAGGAGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CAA 90 bp TCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGTTGTGGACCTCAGACTaGAAGGGCTCGTTGAGGATC +
Preference number: 5 (lower is better)
Translates to: SKKSSGKGGEGARPAWLWLWTSD*KGSLRI
Trigger: GATCCTCAACGAGCCCTTCAAGTCTGAGGTCCACAA...CCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCAGCACGTCCGGCGTGGTaGTGGGGGCAACGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVAARPAW*WGQRCV
Trigger: CACACAGCGTTGCCCCCACAACCACGCCGGACGTGC...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CAA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTATCTTCGGGTTCTTCTaGGCAATGAGTGGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCIFGFF*AMSGLR
Trigger: CCTCAGGCCACTCATTGCCAAGAAGAACCCGAAGAT...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp GTCATGGCGCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGAGGACGGTCATCATTTaGGACATGGGGATCTTCGGG +
Preference number: 5 (lower is better)
Translates to: VMAPVPDVVDFPRGYSSPRTVII*DMGIFG
Trigger: CCCGAAGATCCCCATGTCCAAAATGATGACCGTCCT...CGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGCGCCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp AGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGATTTTTCTTCCCATCTTaGGAGCCTTTGATCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RWRGGTSGVVVGATLCGRFFFPS*EPLIFF
Trigger: GAAGAAGATCAAAGGCTCCAAAGATGGGAAGAAAAA...TCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCCCTCGCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTGGGTTCTTGAGCAGCCTCTaGGGCAGCCTGGTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SGGVGGIPTTHMWEDGFGFLSSL*GSLVSS
Trigger: AGAAGACACCAGGCTGCCCAAGAGGCTGCTCAAGAA...CCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TTGCAGACCTGGATCCAGACTGGAGTGTGGGAATGCGCCAAGAGGAAGGACTTGTCGTCCCTCAGCTTCTaGCCCTTCTTGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LQTWIQTGVWECAKRKDLSSLSF*PFLSSL
Trigger: GAGGCTGCTCAAGAAGGGCAAGAAGCTGAGGGACGA...CAAGTCCTTCCTCTTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGGGCGGCTTCTCCTGCTaGTCGTCCCTCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: EHLNYDEVALLGSGPAELGGFSC*SSLSFL
Trigger: CAAGAAGCTGAGGGACGACAAGCAGGAGAAGCCGCC...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGGAGAAGCGCAGCCAGTaGAGGCCCTCCAGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: EEHLNYDEVALLGSGPAEEKRSQ*RPSSWY
Trigger: GTACCAGCTGGAGGGCCTCAACTGGCTGCGCTTCTC...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGTGGGCCCCGGGGGCATaGAATCTGTCGATTGCCTCC +
Preference number: 5 (lower is better)
Translates to: EEHLNYDEVALLGSGPAEWAPGA*NLSIAS
Trigger: GGAGGCAATCGACAGATTCAATGCCCCCGGGGCCCA...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GAAGAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCCCAGCACCTCGATGTaGCCACCAACTCGGGCGAGA +
Preference number: 5 (lower is better)
Translates to: EEHLNYDEVALLGSGPAEPSTSM*PPTRAR
Trigger: TCTCGCCCGAGTTGGTGGCAACATCGAGGTGCTGGG...CTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGAGCTGGGCTTCCATTTaGTCTGGCAGGCCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: NEISSKKSSGKGGEGARPSWASI*SGRPSG
Trigger: CCCGCTGGGCCTGCCAGACAAAATGGAAGCCCAGCT...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CGAGGACGGCTAGATATCGGTCACATAGGGCCCCAGGGGCATCTGGTTGTAGTTACTAGGTTTCCCTTTTaGTCCCAAGGTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: RGRLDIGHIGPQGHLVVVTRFPF*SQGGAG
Trigger: GCCAGCGCCACCTTGGGACAAAAAGGGAAACCTAGT...AACTACAACCAGATGCCCCTGGGGCCCTATGTGACCGATATCTAGCCGTCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp TTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGGTGCACATCCCCCTTCTaGTCAAAGCTATGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LGPKLLLYIWEEPKAPCWCTSPF*SKLWFR
Trigger: CCTGAACCATAGCTTTGACAAGAAGGGGGATGTGCA...CCAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTAGGAAGCCCTCCAGGTaGTTGAACCTCTCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSRKPSR*LNLSGV
Trigger: GACTCCAGAGAGGTTCAACAACCTGGAGGGCTTCCT...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGTTGAACACGTCAGCCTaGAGCCGCCTGAGCATGTGC +
Preference number: 5 (lower is better)
Translates to: EHLNYDEVALLGSGPAELLNTSA*SRLSMC
Trigger: GCACATGCTCAGGCGGCTCAAGGCTGACGTGTTCAA...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACCCTCCACGTCGTCCTaGAAGAGTTCCTCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVAPSTSS*KSSSVP
Trigger: CGGCACGGAGGAACTCTTCAAGGACGACGTGGAGGG...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTTGCTTGCGGATGCGCTaGCCCTTGCCCAGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALCLRMR*PLPRLR
Trigger: CCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGCA...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGGCTGGGCTCTCGTGCTaGTCCTCACTCTCCACTCTA +
Preference number: 5 (lower is better)
Translates to: EHLNYDEVALLGSGPAELAGLSC*SSLSTL
Trigger: TAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGC...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp CTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTCCCCCGTCCGCGATGTaGAACATGAACTTGAATTTC +
Preference number: 5 (lower is better)
Translates to: LLRSRLEKVARGHVRRGCPPSAM*NMNLNF
Trigger: GAAATTCAAGTTCATGTTCAACATCGCGGACGGGGG...ACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp ACACTGGAGGCTCCAAGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTGACTTGAAGGGCTCGTaGAGGATCATGTACCGTGGG +
Preference number: 5 (lower is better)
Translates to: TLEAPSDRHLTKSIWLLADLKGS*RIMYRG
Trigger: CCCACGGTACATGATCCTCAACGAGCCCTTCAAGTC...AGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACTTGGAGCCTCCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGAGCTGGTTCAGGACCTaGTGCAGGACGGCATTGGCA +
Preference number: 5 (lower is better)
Translates to: EHLNYDEVALLGSGPAELSWFRT*CRTALA
Trigger: TGCCAATGCCGTCCTGCACAAGGTCCTGAACCAGCT...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp AGTGACCGACACTTGACCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCATGCCTTCCAAGACCTaGGCTCAAACATGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SDRHLTKSIWLLAPMYPSMPSKT*AQTWLC
Trigger: GCAGAGCCATGTTTGAGCCAAGGTCTTGGAAGGCAT...GCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGGTCAAGTGTCGGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGGCTGCTTGTCGAACTaGACCGTGGGGTCCACAATG +
Preference number: 5 (lower is better)
Translates to: NEISSKKSSGKGGEGARPGCLSN*TVGSTM
Trigger: CATTGTGGACCCCACGGTCAAGTTCGACAAGCAGCC...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGATGTACCATGGCTGCTaGTCGAACTTGACCGTGGGG +
Preference number: 5 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPEMYHGC*SNLTVG
Trigger: CCCCACGGTCAAGTTCGACAAGCAGCCATGGTACAT...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCTGGTCCTCCACGTCCTTGTaGTCACCTGGCGGGGTGCTA +
Preference number: 5 (lower is better)
Translates to: EPMEYSDWLSESSSCHSWSSTSL*SPGGVL
Trigger: TAGCACCCCGCCAGGTGACAACAAGGACGTGGAGGA...CCAGGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CAA 90 bp TCAGAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCCTGTCCTCCACGTCCTaGTTGTCACCTGGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: SEPMEYSDWLSESSSCHSLSSTS*LSPGGV
Trigger: CACCCCGCCAGGTGACAACAAGGACGTGGAGGACAG...GGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377999.5
ENST00000491020.1
CDS-3UTR CAA 90 bp AATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCTGGGCTCTCGTGCTaGTCCTCACTCTCCACTCTA +
Preference number: 5 (lower is better)
Translates to: NEISSKKSSGKGGEGARPAGLSC*SSLSTL
Trigger: TAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGC...CGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGACTTGAAGGGCTCGTaGAGGATCATGTACCGTGGG +
Preference number: 5 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDEDLKGS*RIMYRG
Trigger: CCCACGGTACATGATCCTCAACGAGCCCTTCAAGTC...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTGCCATGGCGGGGTGGTaGGGGTCCTGCGTCATGTTC +
Preference number: 5 (lower is better)
Translates to: INEISSKKSSGKGGEGARAMAGW*GSCVMF
Trigger: GAACATGACGCAGGACCCCAACCACCCCGCCATGGC...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGACTAGGTTTCCCTTTTaGTCCCAAGGTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: EHLNYDEVALLGSGPAELTRFPF*SQGGAG
Trigger: GCCAGCGCCACCTTGGGACAAAAAGGGAAACCTAGT...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CAA 90 bp CTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTTGTGGGTGTGTGGAAGAACACTaGAATTATGATGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LRSRLEKVARGHVRRGCGCVEEH*NYDEVA
Trigger: TGCCACCTCATCATAATTCAAGTGTTCTTCCACACA...CCCACAACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CAA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCAATCTCCGTCCCCAACTaGGAGGGGCAGGGTCCGGGG +
Preference number: 5 (lower is better)
Translates to: QINEISSKKSSGKGGEGAISVPN*EGQGPG
Trigger: CCCCGGACCCTGCCCCTCCAAGTTGGGGACGGAGAT...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp CCAAAGACGCCAAACATACGGACACCACCATCACCACTTTTGGCAGAGATGACTAGCTGCCCCGAGGACTaGGGCTCCTTTAAGCATCCA +
Preference number: 5 (lower is better)
Translates to: PKTPNIRTPPSPLLAEMTSCPED*GSFKHP
Trigger: TGGATGCTTAAAGGAGCCCAAGTCCTCGGGGCAGCT...AGTCATCTCTGCCAAAAGTGGTGATGGTGGTGTCCGTATGTTTGGCGTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTGGCGGCTTCTCCTGCTaGTCGTCCCTCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALGGFSC*SSLSFL
Trigger: CAAGAAGCTGAGGGACGACAAGCAGGAGAAGCCGCC...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp CGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATCCACTCCGAATGGCGTaGTCCTCAAAGGAAAACTCG +
Preference number: 5 (lower is better)
Translates to: RPAWLWGQRCVEEHLNYDPLRMA*SSKENS
Trigger: CGAGTTTTCCTTTGAGGACAACGCCATTCGGAGTGG...ATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCGGCGTGGTAGCAGCACGTGGAATTaGATCTGCACTTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLLRSRLEKVARGHVRRGSSTWN*ICTSFF
Trigger: GAAGAAAGAAGTGCAGATCAAATTCCACGTGCTGCT...ACCACGCCGGACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TCTACCAGCAGCAAAAACCAAACCCAGCCCAAAGACGCCAAACATACGGACACCTACCGTGCTTCTTCTTaGCACTGGCGGCCAAGTTCC +
Preference number: 5 (lower is better)
Translates to: STSSKNQTQPKDAKHTDTYRASS*HWRPSS
Trigger: GGAACTTGGCCGCCAGTGCAAAGAAGAAGCACGGTA...GGTGTCCGTATGTTTGGCGTCTTTGGGCTGGGTTTGGTTTTTGCTGCTGGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTCCCAGCACCTCGATGTaGCCACCAACTCGGGCGAGA +
Preference number: 5 (lower is better)
Translates to: INEISSKKSSGKGGEGARPSTSM*PPTRAR
Trigger: TCTCGCCCGAGTTGGTGGCAACATCGAGGTGCTGGG...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CCAAAGACGCCAAACATACGGACACCACCATCACCACTTTTGGCAGAGATGACTGCTGGGCTCTCGTGCTaGTCCTCACTCTCCACTCTA +
Preference number: 5 (lower is better)
Translates to: PKTPNIRTPPSPLLAEMTAGLSC*SSLSTL
Trigger: TAGAGTGGAGAGTGAGGACAAGCACGAGAGCCCAGC...AGTCATCTCTGCCAAAAGTGGTGATGGTGGTGTCCGTATGTTTGGCGTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGAAGCTCAGCTCCAGCTaGTCCAGGATCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPEKLSSS*SRIFSF
Trigger: GAAGGAGAAGATCCTGGACAAGCTGGAGCTGAGCTT...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp CCAAGTCCATCTGGCTTCTGGCTCCCATGTACCCGAGCCCACTCTCCACTCCACTCGTCATCTTCCTCTTaGTCACCATTTTGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: PSPSGFWLPCTRAHSPLHSSSSS*SPFCCV
Trigger: AACACAGCAAAATGGTGACAAAGAGGAAGATGACGA...GTGGAGTGGAGAGTGGGCTCGGGTACATGGGAGCCAGAAGCCAGATGGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GGGGCACGTCCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTCGTCATCTTCCTCTTaGTCACCATTTTGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: GARPAWLWGQRCVEEHLNSSSSS*SPFCCV
Trigger: AACACAGCAAAATGGTGACAAAGAGGAAGATGACGA...ATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGGACGTGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TGTCCCCTGCCCACAGACCCTGACGCACACTGGAGGCTCCAAGTGACCGACACTATGTTGAACATGAACTaGAATTTCCCCTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: CPLPTDPDAHWRLQVTDTMLNMN*NFPFLS
Trigger: GGACAAGAAGGGGAAATTCAAGTTCATGTTCAACAT...AGTGTCGGTCACTTGGAGCCTCCAGTGTGCGTCAGGGTCTGTGGGCAGGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTGGCCAACCCCAGTGCTaGCCACTGCTTGTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALGQPQC*PLLVWG
Trigger: TCCCCAAACAAGCAGTGGCAAGCACTGGGGTTGGCC...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTTTGCACAGAAGAGACTaGGGGGAGGGGCCGAGGCCA +
Preference number: 5 (lower is better)
Translates to: INEISSKKSSGKGGEGARLHRRD*GEGPRP
Trigger: TGGCCTCGGCCCCTCCCCCAAGTCTCTTCTGTGCAA...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTACGTACTGCGCCACCTaGAAGGAGCTCAGGTACTCG +
Preference number: 5 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALTYCAT*KELRYS
Trigger: CGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACGT...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CTTGTCCCTGTCACTCTTCAGCTGCCTCCGGGATTGTCGTCGTCCACTCTGCCCATGTTGAACATGAACTaGAATTTCCCCTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: LVPVTLQLPPGLSSSTLPMLNMN*NFPFLS
Trigger: GGACAAGAAGGGGAAATTCAAGTTCATGTTCAACAT...GGGCAGAGTGGACGACGACAATCCCGGAGGCAGCTGAAGAGTGACAGGGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CAA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGCCCCCGTCCGCGATGTaGAACATGAACTTGAATTTC +
Preference number: 5 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPEPPSAM*NMNLNF
Trigger: GAAATTCAAGTTCATGTTCAACATCGCGGACGGGGG...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TCAGAGCCAATGGAATATTCTGACTGGTTATCAGAGAGCTCATCCTGCCACTCCAGCTGGTTCAGGACCTaGTGCAGGACGGCATTGGCA +
Preference number: 5 (lower is better)
Translates to: SEPMEYSDWLSESSSCHSSWFRT*CRTALA
Trigger: TGCCAATGCCGTCCTGCACAAGGTCCTGAACCAGCT...GGAGTGGCAGGATGAGCTCTCTGATAACCAGTCAGAATATTCCATTGGCTCTGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS-3UTR CAA 90 bp GCCGGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTGTGTGGAAGAACACTaGAATTATGATGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: AGARCRRFSQRIQQPAPRCVEEH*NYDEVA
Trigger: TGCCACCTCATCATAATTCAAGTGTTCTTCCACACA...ACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TTGCAGACCTGGATCCAGACTGGAGTGTGGGAATGCGCCAAGAGGAAGGACTTGTCTGATAGCTCATCATaGCTCCCCTCTTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LQTWIQTGVWECAKRKDLSDSSS*LPSFFF
Trigger: GAAGAAGAAAGAGGGGAGCAATGATGAGCTATCAGA...CAAGTCCTTCCTCTTGGCGCATTCCCACACTCCAGTCTGGATCCAGGTCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp GTTGGGCCCAAAGTTGTTGCTGTACATCTGGGAGGAGCCGAAAGCGCCCTGCTGTTTTTCTTCCCATCTTaGGAGCCTTTGATCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VGPKVVAVHLGGAESALLFFFPS*EPLIFF
Trigger: GAAGAAGATCAAAGGCTCCAAAGATGGGAAGAAAAA...CAGCAGGGCGCTTTCGGCTCCTCCCAGATGTACAGCAACAACTTTGGGCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTATGTACCATGGCTGCTaGTCGAACTTGACCGTGGGG +
Preference number: 5 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALMYHGC*SNLTVG
Trigger: CCCCACGGTCAAGTTCGACAAGCAGCCATGGTACAT...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTGACTTGAAGGGCTCGTaGAGGATCATGTACCGTGGG +
Preference number: 5 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALDLKGS*RIMYRG
Trigger: CCCACGGTACATGATCCTCAACGAGCCCTTCAAGTC...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GGTGCCAGATGTCGTAGATTTTCCCAGAGGATACAGCAGCCCGCTCCTCGTTCTCATGTCGTTCTTTCTTaGGTAGTTGCGATACATCAC +
Preference number: 5 (lower is better)
Translates to: GARCRRFSQRIQQPAPRSHVVLS*VVAIHH
Trigger: GTGATGTATCGCAACTACCAAAGAAAGAACGACATG...AGAACGAGGAGCGGGCTGCTGTATCCTCTGGGAAAATCTACGACATCTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496404.1
CDS-3UTR CAA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTTTCTTGAGCAGCCTCTaGGGCAGCCTGGTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: INEISSKKSSGKGGEGARFLSSL*GSLVSS
Trigger: AGAAGACACCAGGCTGCCCAAGAGGCTGCTCAAGAA...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TTGCTGTGTTTCAATGGGCTCCTTCTCCTCAGCCTTGGTGTCATCTGGCCTGAGAGCAGCACGTGGAATTaGATCTGCACTTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLCFNGLLLLSLGVIWPESSTWN*ICTSFF
Trigger: GAAGAAAGAAGTGCAGATCAAATTCCACGTGCTGCT...CTCAGGCCAGATGACACCAAGGCTGAGGAGAAGGAGCCCATTGAAACACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTAGGAAGCCCTCCAGGTaGTTGAACCTCTCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: INEISSKKSSGKGGEGARRKPSR*LNLSGV
Trigger: GACTCCAGAGAGGTTCAACAACCTGGAGGGCTTCCT...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTTTGGCCGGCATGTTCTaGAACACGTCAGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: INEISSKKSSGKGGEGARLAGMF*NTSALS
Trigger: GCTCAAGGCTGACGTGTTCAAGAACATGCCGGCCAA...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TCCGGGGGAGTGGGTGGGATTCCAACAACCCACATGTGGGAAGATGGTTTTGGGTTCTCCTTCTTGTCCTaGAGTTTCTTCTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: SGGVGGIPTTHMWEDGFGFSFLS*SFFFFF
Trigger: AAAGAAGAAGAAGAAACTCAAGGACAAGAAGGAGAA...CCCAAAACCATCTTCCCACATGTGGGTTGTTGGAATCCCACCCACTCCCCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGGCCGCGGAGCTGCCCTaGAAGGGGTTGTTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKAAELP*KGLLAL
Trigger: CAGCGCCAACAACCCCTTCAAGGGCAGCTCCGCGGC...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGCATGTCGTTCTTTCTTaGGTAGTTGCGATACATCAC +
Preference number: 5 (lower is better)
Translates to: EHLNYDEVALLGSGPAELHVVLS*VVAIHH
Trigger: GTGATGTATCGCAACTACCAAAGAAAGAACGACATG...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAACCAGCCAGTGGGAGTaGAAGGCGTCCTGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQTSQWE*KASCGG
Trigger: GCCCCCGCAGGACGCCTTCAACTCCCACTGGCTGGT...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CCGGCGTGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGTCGTCATCTTCCTCTTaGTCACCATTTTGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: PAWLWGQRCVEEHLNYDESSSSS*SPFCCV
Trigger: AACACAGCAAAATGGTGACAAAGAGGAAGATGACGA...CTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCACGCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTCCCCCGTCCGCGATGTaGAACATGAACTTGAATTTC +
Preference number: 5 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALPPSAM*NMNLNF
Trigger: GAAATTCAAGTTCATGTTCAACATCGCGGACGGGGG...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTTTGTGGACCTCAGACTaGAAGGGCTCGTTGAGGATC +
Preference number: 5 (lower is better)
Translates to: INEISSKKSSGKGGEGARLWTSD*KGSLRI
Trigger: GATCCTCAACGAGCCCTTCAAGTCTGAGGTCCACAA...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGTGTGTGGAAGAACACTaGAATTATGATGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: EHLNYDEVALLGSGPAELCVEEH*NYDEVA
Trigger: TGCCACCTCATCATAATTCAAGTGTTCTTCCACACA...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CAA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCAAGCAGCACGTGGAATTaGATCTGCACTTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVASSTWN*ICTSFF
Trigger: GAAGAAAGAAGTGCAGATCAAATTCCACGTGCTGCT...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCACTGTCCTCCACGTCCTaGTTGTCACCTGGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSLSSTS*LSPGGV
Trigger: CACCCCGCCAGGTGACAACAAGGACGTGGAGGACAG...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp ATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCACGTAAGTTGGGCCCAAAGTaGTTGCTGTACATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: INEISSKKSSGKGGEGARKLGPK*LLYIWE
Trigger: CTCCCAGATGTACAGCAACAACTTTGGGCCCAACTT...ACGTGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp TTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCACTTTCTGATAGCTCATCATaGCTCCCCTCTTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LWGQRCVEEHLNYDEVALSDSSS*LPSFFF
Trigger: GAAGAAGAAAGAGGGGAGCAATGATGAGCTATCAGA...AAGTGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp GAACACTTGAATTATGATGAGGTGGCACTTCTGGGCTCTGGCCCAGCTGAGCTGTTCTCCTTCTTGTCCTaGAGTTTCTTCTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: EHLNYDEVALLGSGPAELFSFLS*SFFFFF
Trigger: AAAGAAGAAGAAGAAACTCAAGGACAAGAAGGAGAA...CAGCTCAGCTGGGCCAGAGCCCAGAAGTGCCACCTCATCATAATTCAAGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGTGGGCCCCGGGGGCATaGAATCTGTCGATTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKWAPGA*NLSIAS
Trigger: GGAGGCAATCGACAGATTCAATGCCCCCGGGGCCCA...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAACCCTCCACGTCGTCCTaGAAGAGTTCCTCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKPSTSS*KSSSVP
Trigger: CGGCACGGAGGAACTCTTCAAGGACGACGTGGAGGG...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAACCTCTCCAGGGGTGCTaGGGCTCCAATCGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKPLQGC*GSNRCL
Trigger: CAAGCAGCGATTGGAGCCCAAGCACCCCTGGAGAGG...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAATCCTCCGTGCCGAACTaGAGGATGTCGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSNFYQDKRVQVFNRKVQSSVPN*RMSSSS
Trigger: GGAGCTGGACGACATCCTCAAGTTCGGCACGGAGGA...TTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGATCCTCCACGTCCTTGTaGTCACCTGGCGGGGTGCTA +
Preference number: 5 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRSSTSL*SPGGVL
Trigger: TAGCACCCCGCCAGGTGACAACAAGGACGTGGAGGA...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp TGGTTGTGGGGGCAACGCTGTGTGGAAGAACACTTGAATTATGATGAGGTGGCAATGTTGAACATGAACTaGAATTTCCCCTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: WLWGQRCVEEHLNYDEVAMLNMN*NFPFLS
Trigger: GGACAAGAAGGGGAAATTCAAGTTCATGTTCAACAT...TGCCACCTCATCATAATTCAAGTGTTCTTCCACACAGCGTTGCCCCCACAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAATGGTCTGCACCGTCTaGCCCAGACCCATCTCATCG +
Preference number: 5 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRMVCTV*PRPISS
Trigger: CGATGAGATGGGTCTGGGCAAGACGGTGCAGACCAT...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGATTGGCCGGCATGTTCTaGAACACGTCAGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SIRHPTFIKTNVFKSSIGLAGMF*NTSALS
Trigger: GCTCAAGGCTGACGTGTTCAAGAACATGCCGGCCAA...TCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000462991.5
CDS-3UTR CAA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGACGTACTGCGCCACCTaGAAGGAGCTCAGGTACTCG +
Preference number: 5 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKTYCAT*KELRYS
Trigger: CGAGTACCTGAGCTCCTTCAAGGTGGCGCAGTACGT...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAGCTGGTTCAGGACCTaGTGCAGGACGGCATTGGCA +
Preference number: 5 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKSWFRT*CRTALA
Trigger: TGCCAATGCCGTCCTGCACAAGGTCCTGAACCAGCT...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGTTCCTCTTCTCGCTCTaGCCGTCTTCATCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKFLFSL*PSSSPE
Trigger: CTCTGGGGATGAAGACGGCAAGAGCGAGAAGAGGAA...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAATTCTTGAGCAGCCTCTaGGGCAGCCTGGTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKFLSSL*GSLVSS
Trigger: AGAAGACACCAGGCTGCCCAAGAGGCTGCTCAAGAA...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAAGCCCTCCAGGTTGTaGAACCTCTCTGGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKKPSRL*NLSGVR
Trigger: CCTGACTCCAGAGAGGTTCAACAACCTGGAGGGCTT...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGTACCGTGCTTCTTCTTaGCACTGGCGGCCAAGTTCC +
Preference number: 5 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKYRASS*HWRPSS
Trigger: GGAACTTGGCCGCCAGTGCAAAGAAGAAGCACGGTA...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
CDS-3UTR CAA 90 bp CATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAACTAGGTTTCCCTTTTaGTCCCAAGGTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: HPTFIKTNVFKSSIGKCKTRFPF*SQGGAG
Trigger: GCCAGCGCCACCTTGGGACAAAAAGGGAAACCTAGT...TTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000475121.1
ENST00000496404.1
CDS-3UTR CAA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGATGTGGGAAGATGGTTTaGGGATGTCAGGGCGCTCCT +
Preference number: 5 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRCGKMV*GCQGAP
Trigger: AGGAGCGCCCTGACATCCCAAAACCATCTTCCCACA...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGGGCTCCAATCGCTGCTaGAGGAGTTCAGGACACACA +
Preference number: 5 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKGSNRC*RSSGHT
Trigger: TGTGTGTCCTGAACTCCTCAAGCAGCGATTGGAGCC...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp CAAATAAATGAAATCTCTTCTAAGAAGTCGTCTGGAAAAGGTGGCGAGGGGGCAATGTTGAACATGAACTaGAATTTCCCCTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: QINEISSKKSSGKGGEGAMLNMN*NFPFLS
Trigger: GGACAAGAAGGGGAAATTCAAGTTCATGTTCAACAT...TGCCCCCTCGCCACCTTTTCCAGACGACTTCTTAGAAGAGATTTCATTTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS-3UTR CAA 90 bp GAATCTTCCATACGTCATCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAGTAAAGGTGATTGTGTaGGCTACAGCCTCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: ESSIRHPTFIKTNVFKSSVKVIV*ATASVQ
Trigger: CTGGACAGAGGCTGTAGCCAACACAATCACCTTTAC...TGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGATGACGTATGGAAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGAAGTTGGGCCCAAAGTaGTTGCTGTACATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKKLGPK*LLYIWE
Trigger: CTCCCAGATGTACAGCAACAACTTTGGGCCCAACTT...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGACCATCTTTGGAGCCTTaGATCTTCTTCCTCACTCCA +
Preference number: 5 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRPSLEP*IFFLTP
Trigger: TGGAGTGAGGAAGAAGATCAAAGGCTCCAAAGATGG...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS-3UTR CAA 90 bp TCCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGCCACCATCACCACTTTaGGCAGAGATGACTGACAAA +
Preference number: 5 (lower is better)
Translates to: SNFYQDKRVQVFNRKVQKPPSPL*AEMTDK
Trigger: TTTGTCAGTCATCTCTGCCAAAAGTGGTGATGGTGG...CTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS-3UTR CAA 90 bp CCAACTTTTATCAAGACAAACGTGTTCAAGTCTTCAATAGGAAAGTGCAAAAGATCGTCATCTTCCTCTTaGTCACCATTTTGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: PTFIKTNVFKSSIGKCKRSSSSS*SPFCCV
Trigger: AACACAGCAAAATGGTGACAAAGAGGAAGATGACGA...TCTTTTGCACTTTCCTATTGAAGACTTGAACACGTTTGTCTTGATAAAAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262450.8
ENST00000377999.5
ENST00000462991.5
ENST00000496404.1
CDS GCA 72 bp TCTCCTCGGCGAACAGCCGCGGCAGCTCCTCCTCGGTaGCCACTGGGCCCCGCATGCCCGGCGCGGGGAGGA +
Preference number: 6 (lower is better)
Translates to: SPRRTAAAAPPR*PLGPACPARGG
Trigger: TCCTCCCCGCGCCGGGCATGCGGGGCCCAGTGGGCACCGAGGAGGAGCTGCCGCGGCTGTTCGCCGAGGAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262450.8
CDS CCA 72 bp GGCCTGAGGCCCGGGATGAGAGGCCCCCTGGGAGGGTaGTGGGCGGCAGCAGCACAGACCTGGATGTCATTG +
Preference number: 6 (lower is better)
Translates to: GLRPGMRGPLGG*WAAAAQTWMSL
Trigger: CAATGACATCCAGGTCTGTGCTGCTGCCGCCCACCACCCTCCCAGGGGGCCTCTCATCCCGGGCCTCAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377999.5
CDS CCA 72 bp AGGGCTGCAGAGCATTCGGAGCGCACGGAGGCACTGTaGATGCTGGCGCTGTCGAAGTCCGACTCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: RAAEHSERTEAL*MLALSKSDSSL
Trigger: GAGGGAGGAGTCGGACTTCGACAGCGCCAGCATCCACAGTGCCTCCGTGCGCTCCGAATGCTCTGCAGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS CCA 72 bp GCCCAAGAGAAGCGCAGCCAGTTGAGGCCCTCCAGCTaGTACGGGTGCAGTGTGCCGCCTGTGGAGTCGATG +
Preference number: 6 (lower is better)
Translates to: AQEKRSQLRPSS*YGCSVPPVESM
Trigger: CATCGACTCCACAGGCGGCACACTGCACCCGTACCAGCTGGAGGGCCTCAACTGGCTGCGCTTCTCTTGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS GCA 72 bp AAGCGCAGCCAGTTGAGGCCCTCCAGCTGGTACGGGTaGAGTGTGCCGCCTGTGGAGTCGATGTACCATGGC +
Preference number: 6 (lower is better)
Translates to: KRSQLRPSSWYG*SVPPVESMYHG
Trigger: GCCATGGTACATCGACTCCACAGGCGGCACACTGCACCCGTACCAGCTGGAGGGCCTCAACTGGCTGCGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS GCA 72 bp GTGGGGTCCACAATGGGCGTGTCCGGCGGCTTCTCCTaGTTGTCGTCCCTCAGCTTCTTGCCCTTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: VGSTMGVSGGFS*LSSLSFLPFLS
Trigger: GCTCAAGAAGGGCAAGAAGCTGAGGGACGACAAGCAGGAGAAGCCGCCGGACACGCCCATTGTGGACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS CAA 72 bp GGGTCCACAATGGGCGTGTCCGGCGGCTTCTCCTGCTaGTCGTCCCTCAGCTTCTTGCCCTTCTTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: GSTMGVSGGFSC*SSLSFLPFLSS
Trigger: GCTGCTCAAGAAGGGCAAGAAGCTGAGGGACGACAAGCAGGAGAAGCCGCCGGACACGCCCATTGTGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS CCA 72 bp CAGAGCATTCGGAGCGCACGGAGGCACTGTGGATGCTaGCGCTGTCGAAGTCCGACTCCTCCCTCTCATCTT +
Preference number: 6 (lower is better)
Translates to: QSIRSARRHCGC*RCRSPTPPSHL
Trigger: AAGATGAGAGGGAGGAGTCGGACTTCGACAGCGCCAGCATCCACAGTGCCTCCGTGCGCTCCGAATGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS TCA 72 bp GAATCACCGAGCGGCTCTCCTTGTCCCCCGTGTAGGTaGCCACGTAGAAGTCGGGCGCCCACATCTCAAACT +
Preference number: 6 (lower is better)
Translates to: ESPSGSPCPPCR*PRRSRAPTSQT
Trigger: AGTTTGAGATGTGGGCGCCCGACTTCTACGTGGTCACCTACACGGGGGACAAGGAGAGCCGCTCGGTGATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS GCA 72 bp TGCAGTGTGCCGCCTGTGGAGTCGATGTACCATGGCTaGTTGTCGAACTTGACCGTGGGGTCCACAATGGGC +
Preference number: 6 (lower is better)
Translates to: CSVPPVESMYHG*LSNLTVGSTMG
Trigger: GCCCATTGTGGACCCCACGGTCAAGTTCGACAAGCAGCCATGGTACATCGACTCCACAGGCGGCACACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS CAA 72 bp AGTGTGCCGCCTGTGGAGTCGATGTACCATGGCTGCTaGTCGAACTTGACCGTGGGGTCCACAATGGGCGTG +
Preference number: 6 (lower is better)
Translates to: SVPPVESMYHGC*SNLTVGSTMGV
Trigger: CACGCCCATTGTGGACCCCACGGTCAAGTTCGACAAGCAGCCATGGTACATCGACTCCACAGGCGGCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS CAA 72 bp ACCCGGACAATGAGCTCGGTCTTGGCCGGCATGTTCTaGAACACGTCAGCCTTGAGCCGCCTGAGCATGTGC +
Preference number: 6 (lower is better)
Translates to: TRTMSSVLAGMF*NTSALSRLSMC
Trigger: GCACATGCTCAGGCGGCTCAAGGCTGACGTGTTCAAGAACATGCCGGCCAAGACCGAGCTCATTGTCCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS TCA 72 bp CCAGCATCAGCTCCCTGTGGCCCCAGTAGGCCTGCTTaGGGTTGTCGTAGTAGGGGATGTCGATGTCATCGA +
Preference number: 6 (lower is better)
Translates to: PASAPCGPSRPA*GCRSRGCRCHR
Trigger: TCGATGACATCGACATCCCCTACTACGACAACCTCAAGCAGGCCTACTGGGGCCACAGGGAGCTGATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262450.8
ENST00000462991.5
ENST00000496404.1
CDS CAA 90 bp TTGAGCCCGGCCGTCTTTTTCCCTTTGCCCTTTTTCTTCCCATCTTaGGAGCCTTTGATCTTCTTCCTCACTCCAGGCCCTTTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: LSPAVFFPLPFFFPS*EPLIFFLTPGPLPS
Trigger: GGAGGGCAAAGGGCCTGGAGTGAGGAAGAAGATCAAAGGCTCCAAAGATGGGAAGAAAAAGGGCAAAGGGAAAAAGACGGCCGGGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS CAA 72 bp GTCATCATTTTGGACATGGGGATCTTCGGGTTCTTCTaGGCAATGAGTGGCCTGAGGAACTGGCTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: VIILDMGIFGFF*AMSGLRNWLKA
Trigger: GGCCTTCAGCCAGTTCCTCAGGCCACTCATTGCCAAGAAGAACCCGAAGATCCCCATGTCCAAAATGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS CAA 90 bp TTGCTCCCCTCTTTCTTCTTCCGCTTCCCTTTACACTTGTTTTCCTaGAGCTTCTTGGGTTTCTTCTTCTTAGGAAGGCTCACGGGCTCC +
Preference number: 6 (lower is better)
Translates to: LLPSFFFRFPLHLFS*SFLGFFFLGRLTGS
Trigger: GGAGCCCGTGAGCCTTCCTAAGAAGAAGAAACCCAAGAAGCTCAAGGAAAACAAGTGTAAAGGGAAGCGGAAGAAGAAAGAGGGGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS CAA 90 bp TCTTTCTTCTTCCGCTTCCCTTTACACTTGTTTTCCTTGAGCTTCTaGGGTTTCTTCTTCTTAGGAAGGCTCACGGGCTCCACAGGGAAA +
Preference number: 6 (lower is better)
Translates to: SFFFRFPLHLFSLSF*GFFFLGRLTGSTGK
Trigger: TTTCCCTGTGGAGCCCGTGAGCCTTCCTAAGAAGAAGAAACCCAAGAAGCTCAAGGAAAACAAGTGTAAAGGGAAGCGGAAGAAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1
CDS GCA 72 bp GTTTCTTCTTCTTCTTTTTATTCGGGGAGTAGTCACTaGCTTCACTCTCCGACTTCTCTTCCAGATCCTCTT +
Preference number: 6 (lower is better)
Translates to: VSSSSFYSGSSH*LHSPTSLPDPL
Trigger: AAGAGGATCTGGAAGAGAAGTCGGAGAGTGAAGGCAGTGACTACTCCCCGAATAAAAAGAAGAAGAAGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262450.8
ENST00000496404.1