RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000170004

Ensembl transcript IDs: ENST00000330494.12, ENST00000358181.8, ENST00000380358.9, ENST00000452447.1, ENST00000466233.1, ENST00000470531.5, ENST00000481999.1, ENST00000570758.1, ENST00000571249.1, ENST00000572579.1, ENST00000572750.1, ENST00000671866.1, ENST00000672274.1, ENST00000672838.1, ENST00000682063.1, ENST00000682344.1

Found 916 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTCGGCCAGGCACTCGGCCTCGGCGAAGCGGGCGTGGAGGGCCATaGCGGGGTGCGCCGGCTCCTGCGACAGGTTCAGGTAGGCCGCCC +
Preference number: 1 (lower is better)
Translates to: SRPGTRPRRSGRGGP*RGAPAPATGSGRPP
Trigger: GGGCGGCCTACCTGAACCTGTCGCAGGAGCCGGCGCACCCCGCCATGGCCCTCCACGCCCGCTTCGCCGAGGCCGAGTGCCTGGCCGAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR GCA 90 bp GGCTGTGATGAAGGACCCTGCAGGCATCTGGCTGTAATTGGCGCCTaGGGCGGCCAGGGCCCCTACGGGTGCGGCGCTGAAGGCCGCCCC +
Preference number: 1 (lower is better)
Translates to: GCDEGPCRHLAVIGA*GGQGPYGCGAEGRP
Trigger: GGGGCGGCCTTCAGCGCCGCACCCGTAGGGGCCCTGGCCGCCGCAGGCGCCAATTACAGCCAGATGCCTGCAGGGTCCTTCATCACAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CCA 90 bp GAACAGCAGTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTaGGGAGAGGTAGGGGACGGTAACATGCAGCCACCCCTCCTCGTC +
Preference number: 1 (lower is better)
Translates to: EQQLTSSLITAPPST*GEVGDGNMQPPLLV
Trigger: GACGAGGAGGGGTGGCTGCATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAACTGCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CCA 90 bp CTTTTCCTCTCGTCGCCCATTGGACCGTGGCTCATCTCGAGGCCCTaGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTGCC +
Preference number: 1 (lower is better)
Translates to: LFLSSPIGPWLISRP*SKLPVTFYIFCSLA
Trigger: GGCAAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGACGAGAGGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR GCA 90 bp ACCTTCTTTTTGACGAGAGACATGACTCCAATGCGGGTCAACACCTaGTGGCGACTCAGTCCCTCCCGAGGGACCCCATCGGCAAAGGTT +
Preference number: 1 (lower is better)
Translates to: TFFLTRDMTPMRVNT*WRLSPSRGTPSAKV
Trigger: AACCTTTGCCGATGGGGTCCCTCGGGAGGGACTGAGTCGCCAGCAGGTGTTGACCCGCATTGGAGTCATGTCTCTCGTCAAAAAGAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR GCA 90 bp AAATCCCTACTCTGCTGCGTCAGCCCAATCCGGTCTCCCCACTCCTaGAGCTTCGTGGCTCTGCATACATTTTCTGGACATTGCGCATGT +
Preference number: 1 (lower is better)
Translates to: KSLLCCVSPIRSPHS*SFVALHTFSGHCAC
Trigger: ACATGCGCAATGTCCAGAAAATGTATGCAGAGCCACGAAGCTGCAGGAGTGGGGAGACCGGATTGGGCTGACGCAGCAGAGTAGGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CCA 90 bp TCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTaGGGAGGCTCCACCTCTTTCCTCCCCACAACCATTTACTGGGAA +
Preference number: 1 (lower is better)
Translates to: SPLPHETELILQGNG*GGSTSFLPTTIYWE
Trigger: TTCCCAGTAAATGGTTGTGGGGAGGAAAGAGGTGGAGCCTCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CCA 90 bp AACGGCTGGGGAGGCTCCACCTCTTTCCTCCCCACAACCATTTACTaGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGA +
Preference number: 1 (lower is better)
Translates to: NGWGGSTSFLPTTIY*EVVYTWQCGRKVLG
Trigger: TCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGGAAAGAGGTGGAGCCTCCCCAGCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CCA 90 bp CCGGTCTCCCCACTCCTGCAGCTTCGTGGCTCTGCATACATTTTCTaGACATTGCGCATGTTCCATGCCATCTCTTACCTGCAATGTGCT +
Preference number: 1 (lower is better)
Translates to: PVSPLLQLRGSAYIF*TLRMFHAISYLQCA
Trigger: AGCACATTGCAGGTAAGAGATGGCATGGAACATGCGCAATGTCCAGAAAATGTATGCAGAGCCACGAAGCTGCAGGAGTGGGGAGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR GCA 90 bp CCCCACTCCTGCAGCTTCGTGGCTCTGCATACATTTTCTGGACATTaGGCATGTTCCATGCCATCTCTTACCTGCAATGTGCTCTCCTCA +
Preference number: 1 (lower is better)
Translates to: PHSCSFVALHTFSGH*ACSMPSLTCNVLSS
Trigger: TGAGGAGAGCACATTGCAGGTAAGAGATGGCATGGAACATGCGCAATGTCCAGAAAATGTATGCAGAGCCACGAAGCTGCAGGAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CCA 90 bp TTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTaGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCA +
Preference number: 1 (lower is better)
Translates to: LLGSCVYLAVWEEGT*KTLPAISHPDFFSP
Trigger: TGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CCA 90 bp ACCTCTTTCCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTaGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCT +
Preference number: 1 (lower is better)
Translates to: TSFLPTTIYWEVVYT*QCGRKVLGRPCQPS
Trigger: AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGGAAAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp ACTCAGTCCCTCCCGAGGGACCCCATCGGCAAAGGTTTCAGAGCCGTCTGCCCCCTGCAGGGAAACGGCTaGGGAGGCTCCACCTCTTTC +
Preference number: 2 (lower is better)
Translates to: TQSLPRDPIGKGFRAVCPLQGNG*GGSTSF
Trigger: GAAAGAGGTGGAGCCTCCCCAGCCGTTTCCCTGCAG...GGGGCAGACGGCTCTGAAACCTTTGCCGATGGGGTCCCTCGGGAGGGACTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACGCTCCACCCTCCACGTaGGGAGAGGTAGGGGACGGT +
Preference number: 2 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHAPPST*GEVGDG
Trigger: ACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGC...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTCGCCCATTGGACCGTaGCTCATCTCGAGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTSPIGP*LISRPW
Trigger: CCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR TCA 90 bp CTGGCGACTCAGTCCCTCCCGAGGGACCCCATCGGCAAAGGTTTCAGAGCCGTCACAAAGGGCCCTTCTTaGAGAGAGGAGCTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: LATQSLPRDPIGKGFRAVTKGPS*REELQR
Trigger: TCTCTGCAGCTCCTCTCTTCAAGAAGGGCCCTTTGT...GACGGCTCTGAAACCTTTGCCGATGGGGTCCCTCGGGAGGGACTGAGTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp GTCAGTCGTCTATACAGATCACCTCCCCGGCTCGGGGCTCCTTCCGATCCAGCCTCAATCACCAGCGCCTaGTCCAGGAGCTTGAACCTC +
Preference number: 2 (lower is better)
Translates to: VSRLYRSPPRLGAPSDPASITSA*SRSLNL
Trigger: GAGGTTCAAGCTCCTGGAGCAGGCGCTGGTGATTGA...GGCTGGATCGGAAGGAGCCCCGAGCCGGGGAGGTGATCTGTATAGACGACTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGCTGCAGGGAAACGGCTaGGGAGGCTCCACCTCTTTC +
Preference number: 2 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMLQGNG*GGSTSF
Trigger: GAAAGAGGTGGAGCCTCCCCAGCCGTTTCCCTGCAG...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CAA 90 bp CAGGGACTGTTGGTAGCAGAAGCCTCAGGAGTGGTGGGAGACGTTTaGGTAGGAGAGGAGGCTCTGGAGGAGCGCTTAGAATCGGCGCTG +
Preference number: 2 (lower is better)
Translates to: QGLLVAEASGVVGDV*VGEEALEERLESAL
Trigger: CAGCGCCGATTCTAAGCGCTCCTCCAGAGCCTCCTCTCCTACCAAAACGTCTCCCACCACTCCTGAGGCTTCTGCTACCAACAGTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CAA 90 bp TTGAACATGAACCGGGGCTTCTCTGTCTTTTCCTCTCGTCGCCCATaGGACCGTGGCTCATCTCGAGGCCCTGGTCGAAGCTCCCGGTCA +
Preference number: 2 (lower is better)
Translates to: LNMNRGFSVFSSRRP*DRGSSRGPGRSSRS
Trigger: TGACCGGGAGCTTCGACCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGACGAGAGGAAAAGACAGAGAAGCCCCGGTTCATGTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR TCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCACCGGAGCTGCCTCTTTaGCTGTCTACGCCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: GSLEQVGELLFGLREYHPPELPL*LSTPFR
Trigger: CCTGAAGGGCGTAGACAGTCAAAGAGGCAGCTCCGG...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp AGCAGAAGCCTCAGGAGTGGTGGGAGACGTTTTGGTAGGAGAGGAGGCTCTGGACGGTCTCCCCACTCCTaGAGCTTCGTGGCTCTGCAT +
Preference number: 2 (lower is better)
Translates to: SRSLRSGGRRFGRRGGSGRSPHS*SFVALH
Trigger: ATGCAGAGCCACGAAGCTGCAGGAGTGGGGAGACCG...TCCAGAGCCTCCTCTCCTACCAAAACGTCTCCCACCACTCCTGAGGCTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACAAATCCCTACTCTGCTaGGTCAGCCCAATCCGGTCT +
Preference number: 2 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDKSLLC*VSPIRS
Trigger: AGACCGGATTGGGCTGACGCAGCAGAGTAGGGATTT...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp CTGGCGACTCAGTCCCTCCCGAGGGACCCCATCGGCAAAGGTTTCAGAGCCGTCTCCACATTCTCCTCCTaGTTGATGATCTCTCGCTCA +
Preference number: 2 (lower is better)
Translates to: LATQSLPRDPIGKGFRAVSTFSS*LMISRS
Trigger: TGAGCGAGAGATCATCAAGCAGGAGGAGAATGTGGA...GACGGCTCTGAAACCTTTGCCGATGGGGTCCCTCGGGAGGGACTGAGTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACGGTTTCAGAGCCGTCTaGCCCAGGCTCACACAGATG +
Preference number: 2 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHGFRAV*PRLTQM
Trigger: CATCTGTGTGAGCCTGGGGCAGACGGCTCTGAAACC...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCCTGCAGGGAAACGGCTaGGGAGGCTCCACCTCTTTC +
Preference number: 2 (lower is better)
Translates to: SLEQVGELLFGLREYHPTLQGNG*GGSTSF
Trigger: GAAAGAGGTGGAGCCTCCCCAGCCGTTTCCCTGCAG...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTGGCGTCGACTCTGTaGCTGACTTCTCTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHLASTL*LTSLCP
Trigger: GGGACAGAGAGAAGTCAGCCACAGAGTCGACGCCAG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR TCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAACAAAGGGCCCTTCTTaGAGAGAGGAGCTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGTKGPS*REELQR
Trigger: TCTCTGCAGCTCCTCTCTTCAAGAAGGGCCCTTTGT...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR TCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTACACAGGAGGTAACTaGGCCAGTGAACGGCACCTT +
Preference number: 2 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTYTGGN*ASERHL
Trigger: AAGGTGCCGTTCACTGGCTCAGTTACCTCCTGTGTA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR TCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCAGCTCCTCTTTGGCTTaGGGGAGTATCACCCAACCA +
Preference number: 2 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTSSSLA*GSITQP
Trigger: TGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR GCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGTACTTGGAAGACCCTaGCAGCCATCTCCCACCCAG +
Preference number: 2 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELVLGRP*QPSPTQ
Trigger: CTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTAC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAAGGAAATCCCTACTCTaGTGCGTCAGCCCAATCCGG +
Preference number: 2 (lower is better)
Translates to: GSLEQVGELLFGLREYHPRKSLL*CVSPIR
Trigger: CCGGATTGGGCTGACGCAGCAGAGTAGGGATTTCCT...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCGAACCCGCTTGCCCTTaGCTAGATTCCGGGCTAGGT +
Preference number: 2 (lower is better)
Translates to: SLEQVGELLFGLREYHPTEPACP*LDSGLG
Trigger: ACCTAGCCCGGAATCTAGGCAAGGGCAAGCGGGTTC...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTGCTTGCGAACCCGCTTaGCCTTGCCTAGATTCCGGG +
Preference number: 2 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLACEPA*PCLDSG
Trigger: CCCGGAATCTAGGCAAGGGCAAGCGGGTTCGCAAGC...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTATGCGGGTCAACACCTaGTGGCGACTCAGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLMRVNT*WRLSPS
Trigger: GGAGGGACTGAGTCGCCAGCAGGTGTTGACCCGCAT...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CCA 90 bp CTGGCGACTCAGTCCCTCCCGAGGGACCCCATCGGCAAAGGTTTCAGAGCCGTCGAAGTTGTGTATACTTaGCAGTGTGGGAGGAAGGTA +
Preference number: 2 (lower is better)
Translates to: LATQSLPRDPIGKGFRAVEVVYT*QCGRKV
Trigger: TACCTTCCTCCCACACTGCCAAGTATACACAACTTC...GACGGCTCTGAAACCTTTGCCGATGGGGTCCCTCGGGAGGGACTGAGTCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR TCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCACATGAGACAGAGCTaGTTCTGCAGGGAAACGGCT +
Preference number: 2 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHHMRQS*FCRETA
Trigger: AGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR GCA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTTTCCTCCCTCATAACTaGTCCACCCTCCACGTGGGG +
Preference number: 2 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLFLPHN*STLHVG
Trigger: CCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAA...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp ACGGGTGTTGAAGCCCAGCACCTCAATGTTGCCCCCGACTCGGGCCAGCAGTGGACATTTTCTGGACATTaGGCATGTTCCATGCCATCT +
Preference number: 2 (lower is better)
Translates to: TGVEAQHLNVAPDSGQQWTFSGH*ACSMPS
Trigger: AGATGGCATGGAACATGCGCAATGTCCAGAAAATGT...CCACTGCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGGCTTCAACACCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGTCTTCAAGGCTTGGTaGGAAAGGTGTGTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: GSLEQVGELLFGLREYHPVFKAW*ERCVGV
Trigger: CACTCCCACACACCTTTCCCACCAAGCCTTGAAGAC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACGTCCCTAGAACAGGTTaGGGAGCTCCTCTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHVPRTG*GAPLWL
Trigger: AAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGAC...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCTTCTTCACAAGCACTaGAGGGCCGTTGGTGGCGGC +
Preference number: 2 (lower is better)
Translates to: LEQVGELLFGLREYHPTILLHKH*RAVGGG
Trigger: GCCGCCACCAACGGCCCTCCAGTGCTTGTGAAGAAG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR TCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCACAAAGGGCCCTTCTTaGAGAGAGGAGCTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELTKGPS*REELQR
Trigger: TCTCTGCAGCTCCTCTCTTCAAGAAGGGCCCTTTGT...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR TCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTACACAGGAGGTAACTaGGCCAGTGAACGGCACCTT +
Preference number: 2 (lower is better)
Translates to: SLEQVGELLFGLREYHPTYTGGN*ASERHL
Trigger: AAGGTGCCGTTCACTGGCTCAGTTACCTCCTGTGTA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCACATTTCCCTAGCCTaGCCTCCACTATTTTGCTCT +
Preference number: 2 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTHISLA*PPLFCS
Trigger: AGAGCAAAATAGTGGAGGGCAGGCTAGGGAAATGTG...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGTCTTCAAGGCTTGGTaGGAAAGGTGTGTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELVFKAW*ERCVGV
Trigger: CACTCCCACACACCTTTCCCACCAAGCCTTGAAGAC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCACAGTCTTCAAGGCTTaGTGGGAAAGGTGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSTVFKA*WERCVG
Trigger: TCCCACACACCTTTCCCACCAAGCCTTGAAGACTGT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACAGTCTTCAAGGCTTaGTGGGAAAGGTGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: GSLEQVGELLFGLREYHPTVFKA*WERCVG
Trigger: TCCCACACACCTTTCCCACCAAGCCTTGAAGACTGT...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGTATACTTGGCAGTGTaGGAGGAAGGTACTTGGAAG +
Preference number: 2 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMVYLAV*EEGTWK
Trigger: CTTCCAAGTACCTTCCTCCCACACTGCCAAGTATAC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp CTGGCACCTCATCCTCTAGAGGAATCTTCCTTGGCTCCAGCCGCTCCCCAAGTGTCCACTATTTTGCTCTaGTCCCAACGACAAGGTAGC +
Preference number: 2 (lower is better)
Translates to: LAPHPLEESSLAPAAPQVSTILL*SQRQGS
Trigger: GCTACCTTGTCGTTGGGACCAGAGCAAAATAGTGGA...CACTTGGGGAGCGGCTGGAGCCAAGGAAGATTCCTCTAGAGGATGAGGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CCA 90 bp ACTCAGTCCCTCCCGAGGGACCCCATCGGCAAAGGTTTCAGAGCCGTCTGCCCCTCTGCATACATTTTCTaGACATTGCGCATGTTCCAT +
Preference number: 2 (lower is better)
Translates to: TQSLPRDPIGKGFRAVCPSAYIF*TLRMFH
Trigger: ATGGAACATGCGCAATGTCCAGAAAATGTATGCAGA...GGGGCAGACGGCTCTGAAACCTTTGCCGATGGGGTCCCTCGGGAGGGACTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CAA 90 bp GGGGAGGCTCCACCTCTTTCCTCCCCACAACCATTTACTGGGAAGTaGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCT +
Preference number: 2 (lower is better)
Translates to: GEAPPLSSPQPFTGK*CILGSVGGRYLEDP
Trigger: AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGGAAAGAGGTGGAGCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR TCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAACAAAGGGCCCTTCTTaGAGAGAGGAGCTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: DSPLPHETELILQGNGWGTKGPS*REELQR
Trigger: TCTCTGCAGCTCCTCTCTTCAAGAAGGGCCCTTTGT...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR TCA 90 bp GTCAGTCGTCTATACAGATCACCTCCCCGGCTCGGGGCTCCTTCCGATCCAGCCTTGATAATGGCAAATTaGGCATCATTCTGGATGTCC +
Preference number: 2 (lower is better)
Translates to: VSRLYRSPPRLGAPSDPALIMAN*ASFWMS
Trigger: GGACATCCAGAATGATGCTCAATTTGCCATTATCAA...GGCTGGATCGGAAGGAGCCCCGAGCCGGGGAGGTGATCTGTATAGACGACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGCAGCTTCGTGGCTCTaGATACATTTTCTGGACATT +
Preference number: 2 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGAASWL*IHFLDI
Trigger: AATGTCCAGAAAATGTATGCAGAGCCACGAAGCTGC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTTCTCATTCCGGAGCTaGCTCTTTGACTGTCTACGC +
Preference number: 2 (lower is better)
Translates to: SLEQVGELLFGLREYHPTFSFRS*LFDCLR
Trigger: GCGTAGACAGTCAAAGAGGCAGCTCCGGAATGAGAA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTGTCTTCAAGGCTTGGTaGGAAAGGTGTGTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSVFKAW*ERCVGV
Trigger: CACTCCCACACACCTTTCCCACCAAGCCTTGAAGAC...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGAAGTTGTGTATACTTaGCAGTGTGGGAGGAAGGTA +
Preference number: 2 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMEVVYT*QCGRKV
Trigger: TACCTTCCTCCCACACTGCCAAGTATACACAACTTC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTGCAGGGAAACGGCTaGGGAGGCTCCACCTCTTTC +
Preference number: 2 (lower is better)
Translates to: LFKALFPTKVPKGQARLILQGNG*GGSTSF
Trigger: GAAAGAGGTGGAGCCTCCCCAGCCGTTTCCCTGCAG...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CAA 90 bp TTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTaGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACC +
Preference number: 2 (lower is better)
Translates to: FTGKLCILGSVGGRY*EDPASHLPPRLLLT
Trigger: GGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CAA 90 bp TCCCCACTCCTGCAGCTTCGTGGCTCTGCATACATTTTCTGGACATaGCGCATGTTCCATGCCATCTCTTACCTGCAATGTGCTCTCCTC +
Preference number: 2 (lower is better)
Translates to: SPLLQLRGSAYIFWT*RMFHAISYLQCALL
Trigger: GAGGAGAGCACATTGCAGGTAAGAGATGGCATGGAACATGCGCAATGTCCAGAAAATGTATGCAGAGCCACGAAGCTGCAGGAGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR TCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTCTGTATCCAGGCCTTaGGGAGGGAGGGTAGTAGAA +
Preference number: 2 (lower is better)
Translates to: LEQVGELLFGLREYHPTISVSRP*GGRVVE
Trigger: TTCTACTACCCTCCCTCCTCAAGGCCTGGATACAGA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGTACTTGGAAGACCCTaGCAGCCATCTCCCACCCAG +
Preference number: 2 (lower is better)
Translates to: LFKALFPTKVPKGQARLIVLGRP*QPSPTQ
Trigger: CTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTAC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR GCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCATTCCCAACACAAGATaGCGGTACACAGGAGGTAAC +
Preference number: 2 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELIPNTR*RYTGGN
Trigger: GTTACCTCCTGTGTACCGGCATCTTGTGTTGGGAAT...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCATTGCGCATGTTCCATaGCATCTCTTACCTGCAATG +
Preference number: 2 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSIAHVP*HLLPAM
Trigger: CATTGCAGGTAAGAGATGGCATGGAACATGCGCAAT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGTATACTTGGCAGTGTaGGAGGAAGGTACTTGGAAG +
Preference number: 2 (lower is better)
Translates to: DSPLPHETELILQGNGWGVYLAV*EEGTWK
Trigger: CTTCCAAGTACCTTCCTCCCACACTGCCAAGTATAC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CCA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTACTCCTGCAGCTTCGTaGCTCTGCATACATTTTCTG +
Preference number: 2 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLTPAAS*LCIHFL
Trigger: CAGAAAATGTATGCAGAGCCACGAAGCTGCAGGAGT...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACAGAATGAATGAACACTaGGGGTCTCCTTCTTTGCTA +
Preference number: 2 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHRMNEH*GSPSLL
Trigger: TAGCAAAGAAGGAGACCCCCAGTGTTCATTCATTCT...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTATTCCCAACACAAGATaGCGGTACACAGGAGGTAAC +
Preference number: 2 (lower is better)
Translates to: LEQVGELLFGLREYHPTIIPNTR*RYTGGN
Trigger: GTTACCTCCTGTGTACCGGCATCTTGTGTTGGGAAT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CCA 72 bp CGGCCTCGGGGACGGGGCCTGGGTGAAGGGCAGGCCTaGGATCCAGTCAGTCGTCTATACAGATCACCTCCC +
Preference number: 3 (lower is better)
Translates to: RPRGRGLGEGQA*DPVSRLYRSPP
Trigger: GGGAGGTGATCTGTATAGACGACTGACTGGATCCCAGGCCTGCCCTTCACCCAGGCCCCGTCCCCGAGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTAGCAGGCCCCAGCGCTaGAGCTGGGGGTCGGCCTCG +
Preference number: 3 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLSRPQR*SWGSAS
Trigger: CGAGGCCGACCCCCAGCTCAAGCGCTGGGGCCTGCT...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTAGCAGGCCCCAGCGCTaGAGCTGGGGGTCGGCCTCG +
Preference number: 3 (lower is better)
Translates to: LEQVGELLFGLREYHPTISRPQR*SWGSAS
Trigger: CGAGGCCGACCCCCAGCTCAAGCGCTGGGGCCTGCT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCGAACCCGCTTGCCCTaGCCTAGATTCCGGGCTAGG +
Preference number: 3 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTRTRLP*PRFRAR
Trigger: CCTAGCCCGGAATCTAGGCAAGGGCAAGCGGGTTCG...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR GCA 72 bp TTGACGAGAGACATGACTCCAATGCGGGTCAACACCTaGTGGCGACTCAGTCCCTCCCGAGGGACCCCATCG +
Preference number: 3 (lower is better)
Translates to: LTRDMTPMRVNT*WRLSPSRGTPS
Trigger: CGATGGGGTCCCTCGGGAGGGACTGAGTCGCCAGCAGGTGTTGACCCGCATTGGAGTCATGTCTCTCGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CCA 72 bp CTTCTCTGTCTTTTCCTCTCGTCGCCCATTGGACCGTaGCTCATCTCGAGGCCCTGGTCGAAGCTCCCGGTC +
Preference number: 3 (lower is better)
Translates to: LLCLFLSSPIGP*LISRPWSKLPV
Trigger: GACCGGGAGCTTCGACCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGACGAGAGGAAAAGACAGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CCA 72 bp ACCGGGGCTTCTCTGTCTTTTCCTCTCGTCGCCCATTaGACCGTGGCTCATCTCGAGGCCCTGGTCGAAGCT +
Preference number: 3 (lower is better)
Translates to: TGASLSFPLVAH*TVAHLEALVEA
Trigger: AGCTTCGACCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGACGAGAGGAAAAGACAGAGAAGCCCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAAGCAGGCCCCAGCGCTaGAGCTGGGGGTCGGCCTCG +
Preference number: 3 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEESRPQR*SWGSAS
Trigger: CGAGGCCGACCCCCAGCTCAAGCGCTGGGGCCTGCT...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp CCAGGTTCAGGCTCCATCTCTCCAGGCACCCCTGGCACCTCATCCTCTAGAGGAGTGGTGGGAGACGTTTaGGTAGGAGAGGAGGCTCTG +
Preference number: 3 (lower is better)
Translates to: PGSGSISPGTPGTSSSRGVVGDV*VGEEAL
Trigger: CAGAGCCTCCTCTCCTACCAAAACGTCTCCCACCAC...TCCTCTAGAGGATGAGGTGCCAGGGGTGCCTGGAGAGATGGAGCCTGAACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CCA 72 bp TTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTaGGGAGAGGTAGGGGACGGTAACATGCAGCCACCC +
Preference number: 3 (lower is better)
Translates to: LTSSLITAPPST*GEVGDGNMQPP
Trigger: GGGTGGCTGCATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CCA 72 bp TCGTCGCCCATTGGACCGTGGCTCATCTCGAGGCCCTaGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGC +
Preference number: 3 (lower is better)
Translates to: SSPIGPWLISRP*SKLPVTFYIFC
Trigger: GCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGTGGGAGGAAGGTACTaGGAAGACCCTGCCAGCCAT +
Preference number: 3 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTVGGRY*EDPASH
Trigger: ATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCAC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTGCTTGCGAACCCGCTaGCCCTTGCCTAGATTCCGG +
Preference number: 3 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHCLRTR*PLPRFR
Trigger: CCGGAATCTAGGCAAGGGCAAGCGGGTTCGCAAGCA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTCCGGAGCTGCCTCTTaGACTGTCTACGCCCTTCAG +
Preference number: 3 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTSGAAS*TVYALQ
Trigger: CTGAAGGGCGTAGACAGTCAAAGAGGCAGCTCCGGA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCCCAGCACCTCAATGTaGCCCCCGACTCGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: LEQVGELLFGLREYHPTIPSTSM*PPTRAS
Trigger: GCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGAGGTGCAGGGACTGTaGGTAGCAGAAGCCTCAGGA +
Preference number: 3 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTEVQGL*VAEASG
Trigger: TCCTGAGGCTTCTGCTACCAACAGTCCCTGCACCTC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGAGCTCCTCTTTGGCTaGAGGGAGTATCACCCAACC +
Preference number: 3 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTELLFG*REYHPT
Trigger: GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCACACAGTCTTCAAGGCTaGGTGGGAAAGGTGTGTGGG +
Preference number: 3 (lower is better)
Translates to: GSLEQVGELLFGLREYHPHSLQG*VGKVCG
Trigger: CCCACACACCTTTCCCACCAAGCCTTGAAGACTGTG...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR GCA 72 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTaGCAGCCATCTCCCACCCAGACTTCTTCTCACCAG +
Preference number: 3 (lower is better)
Translates to: TWQCGRKVLGRP*QPSPTQTSSHQ
Trigger: CTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CCA 72 bp CCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTaGGGAGGCTCCACCTCTTTCCTCCCCACAACCATT +
Preference number: 3 (lower is better)
Translates to: PHETELILQGNG*GGSTSFLPTTI
Trigger: AATGGTTGTGGGGAGGAAAGAGGTGGAGCCTCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCCACAGTCTTCAAGGCTaGGTGGGAAAGGTGTGTGGG +
Preference number: 3 (lower is better)
Translates to: SLEQVGELLFGLREYHPTHSLQG*VGKVCG
Trigger: CCCACACACCTTTCCCACCAAGCCTTGAAGACTGTG...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGAGGCTGAACAGCAGTaGACTTCCTCCCTCATAACT +
Preference number: 3 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTEAEQQ*TSSLIT
Trigger: AGTTATGAGGGAGGAAGTCAACTGCTGTTCAGCCTC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTGGGGGTCTCCTTCTTaGCTAATCCTTCCACTGCAA +
Preference number: 3 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTWGSPS*LILPLQ
Trigger: TTGCAGTGGAAGGATTAGCAAAGAAGGAGACCCCCA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CCA 72 bp CCACATTTCCCTAGCCTGCCCTCCACTATTTTGCTCTaGTCCCAACGACAAGGTAGCTCCCAAGACCCTGAC +
Preference number: 3 (lower is better)
Translates to: PHFPSLPSTILL*SQRQGSSQDPD
Trigger: GTCAGGGTCTTGGGAGCTACCTTGTCGTTGGGACCAGAGCAAAATAGTGGAGGGCAGGCTAGGGAAATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTGTCTGTATCCAGGCCTaGAGGAGGGAGGGTAGTAGA +
Preference number: 3 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLVCIQA*RREGSR
Trigger: TCTACTACCCTCCCTCCTCAAGGCCTGGATACAGAC...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR GCA 72 bp CAATCCGGTCTCCCCACTCCTGCAGCTTCGTGGCTCTaGATACATTTTCTGGACATTGCGCATGTTCCATGC +
Preference number: 3 (lower is better)
Translates to: QSGLPTPAASWL*IHFLDIAHVPC
Trigger: GCATGGAACATGCGCAATGTCCAGAAAATGTATGCAGAGCCACGAAGCTGCAGGAGTGGGGAGACCGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGCCATTTACTGGGAAGTaGTGTATACTTGGCAGTGTG +
Preference number: 3 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMPFTGK*CILGSV
Trigger: CACACTGCCAAGTATACACAACTTCCCAGTAAATGG...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGAGGCTGAACAGCAGTaGACTTCCTCCCTCATAACT +
Preference number: 3 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELEAEQQ*TSSLIT
Trigger: AGTTATGAGGGAGGAAGTCAACTGCTGTTCAGCCTC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTGAGCTCCTCTTTGGCTaGAGGGAGTATCACCCAACC +
Preference number: 3 (lower is better)
Translates to: LEQVGELLFGLREYHPTIELLFG*REYHPT
Trigger: GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTC...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTCTGCCCTCCACTATTTaGCTCTGGTCCCAACGACAA +
Preference number: 3 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLLPSTI*LWSQRQ
Trigger: TTGTCGTTGGGACCAGAGCAAAATAGTGGAGGGCAG...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCATTTACTGGGAAGTaGTGTATACTTGGCAGTGTG +
Preference number: 3 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHPFTGK*CILGSV
Trigger: CACACTGCCAAGTATACACAACTTCCCAGTAAATGG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCACCATTTACTGGGAAGTaGTGTATACTTGGCAGTGTG +
Preference number: 3 (lower is better)
Translates to: GSLEQVGELLFGLREYHPPFTGK*CILGSV
Trigger: CACACTGCCAAGTATACACAACTTCCCAGTAAATGG...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CCA 72 bp CTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTaGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGC +
Preference number: 3 (lower is better)
Translates to: LPTTIYWEVVYT*QCGRKVLGRPC
Trigger: GCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CCA 72 bp ACCTGGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTaGCTTGAGGGAGTATCACCCAACCATTACTCTTTT +
Preference number: 3 (lower is better)
Translates to: TWVPRTGWGAPL*LEGVSPNHYSF
Trigger: AAAAGAGTAATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CCA 72 bp CCACTCCTGCAGCTTCGTGGCTCTGCATACATTTTCTaGACATTGCGCATGTTCCATGCCATCTCTTACCTG +
Preference number: 3 (lower is better)
Translates to: PLLQLRGSAYIF*TLRMFHAISYL
Trigger: CAGGTAAGAGATGGCATGGAACATGCGCAATGTCCAGAAAATGTATGCAGAGCCACGAAGCTGCAGGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTACATTTTCTGGACATaGCGCATGTTCCATGCCATC +
Preference number: 3 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSYIFWT*RMFHAI
Trigger: GATGGCATGGAACATGCGCAATGTCCAGAAAATGTA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTATCATTGTAGTTAACTaGCTTGCGAACCCGCTTGCC +
Preference number: 3 (lower is better)
Translates to: LEQVGELLFGLREYHPTIIIVVN*LANPLA
Trigger: GGCAAGCGGGTTCGCAAGCAAGTTAACTACAATGAT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR TCA 72 bp ATTCCCAACACAAGATGCCGGTACACAGGAGGTAACTaGGCCAGTGAACGGCACCTTTATTCTGAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: IPNTRCRYTGGN*ASERHLYSEAE
Trigger: TTCAGCCTCAGAATAAAGGTGCCGTTCACTGGCTCAGTTACCTCCTGTGTACCGGCATCTTGTGTTGGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR TCA 72 bp GCTCAATTTCCTCAATCTGAAGGGCAACAGAATGAATaGACACTGGGGGTCTCCTTCTTTGCTAATCCTTCC +
Preference number: 3 (lower is better)
Translates to: AQFPQSEGQQNE*TLGVSFFANPS
Trigger: GGAAGGATTAGCAAAGAAGGAGACCCCCAGTGTTCATTCATTCTGTTGCCCTTCAGATTGAGGAAATTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CCA 72 bp TTCCTCAATCTGAAGGGCAACAGAATGAATGAACACTaGGGGTCTCCTTCTTTGCTAATCCTTCCACTGCAA +
Preference number: 3 (lower is better)
Translates to: FLNLKGNRMNEH*GSPSLLILPLQ
Trigger: TTGCAGTGGAAGGATTAGCAAAGAAGGAGACCCCCAGTGTTCATTCATTCTGTTGCCCTTCAGATTGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACCTACGGGTGCGGCGCTaGAGGCCGCCCCGTACCCCG +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDLRVRR*RPPRTP
Trigger: CGGGGTACGGGGCGGCCTTCAGCGCCGCACCCGTAG...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACGGGTGTTGAAGCCCAGCACCTCAATGTTGCCCCCGACTCGGGCCAGCAGTGGTGGGGTGAGGCTCCGTaGCCTTGCTGGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TGVEAQHLNVAPDSGQQWWGEAP*PCWPAG
Trigger: GCCGGCTGGCCAGCAAGGGCACGGAGCCTCACCCCA...CCACTGCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGGCTTCAACACCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR TCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTACGGGTGCGGCGCTaGAGGCCGCCCCGTACCCCG +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHLRVRR*RPPRTP
Trigger: CGGGGTACGGGGCGGCCTTCAGCGCCGCACCCGTAG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTGGGGTGAGGCTCCGTaGCCTTGCTGGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTWGEAP*PCWPAG
Trigger: GCCGGCTGGCCAGCAAGGGCACGGAGCCTCACCCCA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGCTGTAATTGGCGCCTaGGGCGGCCAGGGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDAVIGA*GGQGPY
Trigger: GTAGGGGCCCTGGCCGCCGCAGGCGCCAATTACAGC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACGGGTGTTGAAGCCCAGCACCTCAATGTTGCCCCCGACTCGGGCCAGCAGTGGGTTCGCCATGCAAACTaGCACTCTCCCCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TGVEAQHLNVAPDSGQQWVRHAN*HSPRPL
Trigger: GAGGGGCCGGGGAGAGTGGCAGTTTGCATGGCGAAC...CCACTGCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGGCTTCAACACCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTCAGTCCCTCCCGAGGGACCCCATCGGCAAAGGTTTCAGAGCCGTCTGCCCCCCTGAGCCCCAGAGCTaGGCTTCCACCACATCTGGC +
Preference number: 4 (lower is better)
Translates to: TQSLPRDPIGKGFRAVCPPEPQS*ASTTSG
Trigger: GCCAGATGTGGTGGAAGCCCAGCTCTGGGGCTCAGG...GGGGCAGACGGCTCTGAAACCTTTGCCGATGGGGTCCCTCGGGAGGGACTGAGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR TCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGCCATCAGGCCGGCCTaGGGCACTGTGGACACTGCC +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGAIRPA*GTVDTA
Trigger: GGCAGTGTCCACAGTGCCTCAGGCCGGCCTGATGGC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGCCTGGCCAATCCGATaGGCCCGGCTAAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDAWPIR*ARLKAW
Trigger: CCAGGCCTTTAGCCGGGCTCATCGGATTGGCCAGGC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GTCAGTCGTCTATACAGATCACCTCCCCGGCTCGGGGCTCCTTCCGATCCAGCCCCGATCCAGCCCGTCTaGCACCAATGCCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: VSRLYRSPPRLGAPSDPAPIQPV*HQCPHH
Trigger: ATGGTGGGGGCATTGGTGTCAGACGGGCTGGATCGG...GGCTGGATCGGAAGGAGCCCCGAGCCGGGGAGGTGATCTGTATAGACGACTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATGCTGCTGCTGCCGCTaGCGCCGCCACAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPCCCCR*RRHSSC
Trigger: GCAGCTGCTGTGGCGGCGGCAGCGGCAGCAGCAGCA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTGGGGTGAGGCTCCGTaGCCTTGCTGGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHWGEAP*PCWPAG
Trigger: GCCGGCTGGCCAGCAAGGGCACGGAGCCTCACCCCA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGCGGGTAGGCCGGTGTaGGGTGAGGCTCCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSAGRPV*GEAPCP
Trigger: AGGGCACGGAGCCTCACCCCACACCGGCCTACCCGC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGCCATCAGGCCGGCCTaGGGCACTGTGGACACTGCC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSAIRPA*GTVDTA
Trigger: GGCAGTGTCCACAGTGCCTCAGGCCGGCCTGATGGC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGCCTGGCCAATCCGATaGGCCCGGCTAAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMAWPIR*ARLKAW
Trigger: CCAGGCCTTTAGCCGGGCTCATCGGATTGGCCAGGC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCACTGCGCTCGGACATCTaGAGGCGGGCTGCGATGGGG +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPLRSDI*RRAAMG
Trigger: CCCCATCGCAGCCCGCCTTCAGATGTCCGAGCGCAG...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCTGCGCTCGGACATCTaGAGGCGGGCTGCGATGGGG +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSLRSDI*RRAAMG
Trigger: CCCCATCGCAGCCCGCCTTCAGATGTCCGAGCGCAG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTGCGCTCGGACATCTaGAGGCGGGCTGCGATGGGG +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHLRSDI*RRAAMG
Trigger: CCCCATCGCAGCCCGCCTTCAGATGTCCGAGCGCAG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGCTCAGCTACAGCTGCTaGTGCTGCTGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMLSYSC*CCCRCR
Trigger: GCGGCAGCGGCAGCAGCAGCAGCAGCTGTAGCTGAG...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGTCCGGAGGGTGCTATaGGGGTGGCCGACGAGACAG +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGVRRVL*GWPTRQ
Trigger: CTGTCTCGTCGGCCACCCCCATAGCACCCTCCGGAC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGTCCGGAGGGTGCTATaGGGGTGGCCGACGAGACAG +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTVRRVL*GWPTRQ
Trigger: CTGTCTCGTCGGCCACCCCCATAGCACCCTCCGGAC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACCGGGTCAACACCTGCTaGCGACTCAGTCCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDRVNTC*RLSPSR
Trigger: TCGGGAGGGACTGAGTCGCCAGCAGGTGTTGACCCG...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACCTCATCTCGAGGCCCTaGTCGAAGCTCCCGGTCACC +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDLISRP*SKLPVT
Trigger: GGTGACCGGGAGCTTCGACCAGGGCCTCGAGATGAG...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGTATTCGGGACAGCGTaGCTGGCAGGCGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDVFGTA*LAGGSR
Trigger: ACGTGACCCGCCTGCCAGCCACGCTGTCCCGAATAC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGCATCTGGCTGTAATTaGCGCCTGCGGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTASGCN*RLRRPG
Trigger: CCCTGGCCGCCGCAGGCGCCAATTACAGCCAGATGC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGCATCTGGCTGTAATTaGCGCCTGCGGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMASGCN*RLRRPG
Trigger: CCCTGGCCGCCGCAGGCGCCAATTACAGCCAGATGC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGCTCCACCCTCCACGTaGGGAGAGGTAGGGGACGGT +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMAPPST*GEVGDG
Trigger: ACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGCTCCACCCTCCACGTaGGGAGAGGTAGGGGACGGT +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGAPPST*GEVGDG
Trigger: ACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACCCGGAGCTGCCTCTTTaGCTGTCTACGCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDPELPL*LSTPFR
Trigger: CCTGAAGGGCGTAGACAGTCAAAGAGGCAGCTCCGG...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACCGTCGACTCTGTGGCTaGCTTCTCTCTGTCCCCACG +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDRRLCG*LLSVPT
Trigger: CGTGGGGACAGAGAGAAGTCAGCCACAGAGTCGACG...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAACTACGGGTGCGGCGCTaGAGGCCGCCCCGTACCCCG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEELRVRR*RPPRTP
Trigger: CGGGGTACGGGGCGGCCTTCAGCGCCGCACCCGTAG...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGCTCCCCGCCGTCCTTaGATACGCGGCAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGAPRRP*IRGSTP
Trigger: TGGAGTACTGCCGCGTATGCAAGGACGGCGGGGAGC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGCCAGCACCTCAATGTTaGCCCCGACTCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMPAPQC*PRLGPA
Trigger: TGCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGG...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCGCTGTAATTGGCGCCTaGGGCGGCCAGGGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTAVIGA*GGQGPY
Trigger: GTAGGGGCCCTGGCCGCCGCAGGCGCCAATTACAGC...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGTTCGCCATGCAAACTaGCACTCTCCCCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTVRHAN*HSPRPL
Trigger: GAGGGGCCGGGGAGAGTGGCAGTTTGCATGGCGAAC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTCAGTCCCTCCCGAGGGACCCCATCGGCAAAGGTTTCAGAGCCGTCTGCCCCAGGAAATCCCTACTCTaGTGCGTCAGCCCAATCCGG +
Preference number: 4 (lower is better)
Translates to: TQSLPRDPIGKGFRAVCPRKSLL*CVSPIR
Trigger: CCGGATTGGGCTGACGCAGCAGAGTAGGGATTTCCT...GGGGCAGACGGCTCTGAAACCTTTGCCGATGGGGTCCCTCGGGAGGGACTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCGGATGGGTGGGGGCTaGATATCAGCAGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTRMGGG*ISAAGG
Trigger: ACCCCCTGCTGCTGATATCCAGCCCCCACCCATCCG...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGCCTGAGGCACTGTaGACACTGCCACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGRPEAL*TLPLSR
Trigger: CCTGGACAGTGGCAGTGTCCACAGTGCCTCAGGCCG...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCGGCCTGAGGCACTGTaGACACTGCCACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTRPEAL*TLPLSR
Trigger: CCTGGACAGTGGCAGTGTCCACAGTGCCTCAGGCCG...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGCTCCATTTGCCCTCTaGAGCCCGGTCAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDAPFAL*SPVKLR
Trigger: CCTGAGCTTGACCGGGCTCCAGAGGGCAAATGGAGC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTGCCTGTTGAGGGGCTaGCACTGCTACAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDCLLRG*HCYRWL
Trigger: GAGCCACCTGTAGCAGTGCCAGCCCCTCAACAGGCA...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACGAAGGCGGGCTGCGATaGGGGGTATTCGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHEGGLR*GVFGTA
Trigger: CGCTGTCCCGAATACCCCCCATCGCAGCCCGCCTTC...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGCGGGTAGGCCGGTGTaGGGTGAGGCTCCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGAGRPV*GEAPCP
Trigger: AGGGCACGGAGCCTCACCCCACACCGGCCTACCCGC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACCTGCAGGGAAACGGCTaGGGAGGCTCCACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDLQGNG*GGSTSF
Trigger: GAAAGAGGTGGAGCCTCCCCAGCCGTTTCCCTGCAG...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGCTCCACCCTCCACGTaGGGAGAGGTAGGGGACGGT +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPAPPST*GEVGDG
Trigger: ACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CAA 72 bp AACCGGGGCTTCTCTGTCTTTTCCTCTCGTCGCCCATaGGACCGTGGCTCATCTCGAGGCCCTGGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: NRGFSVFSSRRP*DRGSSRGPGRS
Trigger: GCTTCGACCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGACGAGAGGAAAAGACAGAGAAGCCCCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGCCACTGTCCAGGTCTaGTTCCTCAGCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDATVQV*FLSLWF
Trigger: GAACCAGAGGCTGAGGAATCAGACCTGGACAGTGGC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CCTTCCACTGCAAGGAAATCCCTACTCTGCTGCGTCAGCCCAATCCGGTCTCCCCCGGAGCTGCCTCTTTaGCTGTCTACGCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PSTARKSLLCCVSPIRSPPELPL*LSTPFR
Trigger: CCTGAAGGGCGTAGACAGTCAAAGAGGCAGCTCCGG...GGGAGACCGGATTGGGCTGACGCAGCAGAGTAGGGATTTCCTTGCAGTGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR TCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCCGATCCAGCCCGTCTaGCACCAATGCCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSPIQPV*HQCPHH
Trigger: ATGGTGGGGGCATTGGTGTCAGACGGGCTGGATCGG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTGCTGCTGCTGCCGCTaGCGCCGCCACAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTICCCCR*RRHSSC
Trigger: GCAGCTGCTGTGGCGGCGGCAGCGGCAGCAGCAGCA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCCTCAGCTACAGCTGCTaGTGCTGCTGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTLSYSC*CCCRCR
Trigger: GCGGCAGCGGCAGCAGCAGCAGCAGCTGTAGCTGAG...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTGCTCAGCTACAGCTaGTGCTGCTGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHLLSYS*CCCCRC
Trigger: GCAGCGGCAGCAGCAGCAGCAGCTGTAGCTGAGCAG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCTGCTCAGCTACAGCTaGTGCTGCTGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSLLSYS*CCCCRC
Trigger: GCAGCGGCAGCAGCAGCAGCAGCTGTAGCTGAGCAG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCCTCCTCCCCGGCCACTaGAGGACAGCCCAGGACCTT +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELLLPGH*RTAQDL
Trigger: AAGGTCCTGGGCTGTCCTGCAGTGGCCGGGGAGGAG...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGAGGGCAGCTCCATTTaGCCTCTGGAGCCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTEGSSI*PLEPGQ
Trigger: TTGACCGGGCTCCAGAGGGCAAATGGAGCTGCCCTC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGCTCCCCGCCGTCCTTaGATACGCGGCAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSAPRRP*IRGSTP
Trigger: TGGAGTACTGCCGCGTATGCAAGGACGGCGGGGAGC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCGATCGATGGCCTCCTaGCTCAGGGCACCCGTGATA +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTRSMAS*LRAPVI
Trigger: TATCACGGGTGCCCTGAGGCAGGAGGCCATCGATCG...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CCTTCCACTGCAAGGAAATCCCTACTCTGCTGCGTCAGCCCAATCCGGTCTCCCGCTTGCGAACCCGCTTaGCCTTGCCTAGATTCCGGG +
Preference number: 4 (lower is better)
Translates to: PSTARKSLLCCVSPIRSPACEPA*PCLDSG
Trigger: CCCGGAATCTAGGCAAGGGCAAGCGGGTTCGCAAGC...GGGAGACCGGATTGGGCTGACGCAGCAGAGTAGGGATTTCCTTGCAGTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGCACCTCAATGTTaGCCCCGACTCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHPAPQC*PRLGPA
Trigger: TGCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTGGTTCAGAACCTTGTaGAGGACGGCGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTWFRTL*RTALAG
Trigger: GCCGGCCAACGCCGTCCTGCACAAGGTTCTGAACCA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGTTCGCCATGCAAACTaGCACTCTCCCCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSVRHAN*HSPRPL
Trigger: GAGGGGCCGGGGAGAGTGGCAGTTTGCATGGCGAAC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAAGGGTGCTATGGGGGTaGCCGACGAGACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPRVLWG*PTRQQL
Trigger: CAGCTGCTGTCTCGTCGGCCACCCCCATAGCACCCT...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCAGGGTGCTATGGGGGTaGCCGACGAGACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSRVLWG*PTRQQL
Trigger: CAGCTGCTGTCTCGTCGGCCACCCCCATAGCACCCT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCGGATGGGTGGGGGCTaGATATCAGCAGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSRMGGG*ISAAGG
Trigger: ACCCCCTGCTGCTGATATCCAGCCCCCACCCATCCG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGGCTCTTCGGATGGGTaGGGGCTGGATATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMGSSDG*GLDISS
Trigger: GCTGCTGATATCCAGCCCCCACCCATCCGAAGAGCC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCACGGCCTGAGGCACTGTaGACACTGCCACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPRPEAL*TLPLSR
Trigger: CCTGGACAGTGGCAGTGTCCACAGTGCCTCAGGCCG...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTCATCTCGAGGCCCTaGTCGAAGCTCCCGGTCACC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHLISRP*SKLPVT
Trigger: GGTGACCGGGAGCTTCGACCAGGGCCTCGAGATGAG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTCGCCCATTGGACCGTaGCTCATCTCGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHSPIGP*LISRPW
Trigger: CCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGCCTCTCGTCGCCCATTaGACCGTGGCTCATCTCGAG +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMPLVAH*TVAHLE
Trigger: CTCGAGATGAGCCACGGTCCAATGGGCGACGAGAGG...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp AGCAGAAGCCTCAGGAGTGGTGGGAGACGTTTTGGTAGGAGAGGAGGCTCTGGAGTATTCGGGACAGCGTaGCTGGCAGGCGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: SRSLRSGGRRFGRRGGSGVFGTA*LAGGSR
Trigger: ACGTGACCCGCCTGCCAGCCACGCTGTCCCGAATAC...TCCAGAGCCTCCTCTCCTACCAAAACGTCTCCCACCACTCCTGAGGCTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCGAAGGCGGGCTGCGATaGGGGGTATTCGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTEGGLR*GVFGTA
Trigger: CGCTGTCCCGAATACCCCCCATCGCAGCCCGCCTTC...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGGTGAAGGGCAGGCCTaGGATCCAGTCAGTCGTCTA +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDGEGQA*DPVSRL
Trigger: TAGACGACTGACTGGATCCCAGGCCTGCCCTTCACC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCCTGAGCCCCAGAGCTaGGCTTCCACCACATCTGGC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSPEPQS*ASTTSG
Trigger: GCCAGATGTGGTGGAAGCCCAGCTCTGGGGCTCAGG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGCCACAGCAGCTGCTaGCCCCTTGAAGGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHRHSSC*PLEGVV
Trigger: AACAACCCCTTCAAGGGGTCAGCAGCTGCTGTGGCG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCGACGAGACAGCAGCTaGCACCTGCTCAGCTACAGC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSRRDSS*HLLSYS
Trigger: GCTGTAGCTGAGCAGGTGTCAGCTGCTGTCTCGTCG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGCCACTGTCCAGGTCTaGTTCCTCAGCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMATVQV*FLSLWF
Trigger: GAACCAGAGGCTGAGGAATCAGACCTGGACAGTGGC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCGCCATCAGGCCGGCCTaGGGCACTGTGGACACTGCC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFAIRPA*GTVDTA
Trigger: GGCAGTGTCCACAGTGCCTCAGGCCGGCCTGATGGC...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTGGAAGATTTCCAGCTaGAGCTCCTTGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDWKISS*SSLAQE
Trigger: CTCCTGGGCCAAGGAGCTTCAGCTGGAAATCTTCCA...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGCTCCACCCGAACGATaGGCTCTGTCTTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSAPPER*ALSWLA
Trigger: TGCCAGCCAAGACAGAGCTCATCGTTCGGGTGGAGC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCGCCTCAGGGCACCCGTaGTACCACCATCGATGCGCT +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTASGHP*YHHRCA
Trigger: AGCGCATCGATGGTGGTATCACGGGTGCCCTGAGGC...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGTCCGCTGACGGGTGTTaGAGCCCAGCACCTCAATGT +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMSADGC*SPAPQC
Trigger: ACATTGAGGTGCTGGGCTTCAACACCCGTCAGCGGA...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCCAGCCACTGTGTGGTaGAGGCATCCTGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSPATVW*RHPVVA
Trigger: TGCCACCACAGGATGCCTTCACCACACAGTGGCTGG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp AGCAGAAGCCTCAGGAGTGGTGGGAGACGTTTTGGTAGGAGAGGAGGCTCTGGACCAGCCACTGTGTGGTaGAGGCATCCTGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SRSLRSGGRRFGRRGGSGPATVW*RHPVVA
Trigger: TGCCACCACAGGATGCCTTCACCACACAGTGGCTGG...TCCAGAGCCTCCTCTCCTACCAAAACGTCTCCCACCACTCCTGAGGCTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR TCA 90 bp ACGGGTGTTGAAGCCCAGCACCTCAATGTTGCCCCCGACTCGGGCCAGCAGTGGTTGACCAACGCCCATTaGTGTGCTCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TGVEAQHLNVAPDSGQQWLTNAH*CAQTPA
Trigger: TGCAGGAGTTTGAGCACATCAATGGGCGTTGGTCAA...CCACTGCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGGCTTCAACACCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATGCTGCTGCTGCCGCTaGCGCCGCCACAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEECCCCR*RRHSSC
Trigger: GCAGCTGCTGTGGCGGCGGCAGCGGCAGCAGCAGCA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCTCAGCTACAGCTGCTaGTGCTGCTGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSLSYSC*CCCRCR
Trigger: GCGGCAGCGGCAGCAGCAGCAGCAGCTGTAGCTGAG...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACGAGGGCAGCTCCATTTaGCCTCTGGAGCCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHEGSSI*PLEPGQ
Trigger: TTGACCGGGCTCCAGAGGGCAAATGGAGCTGCCCTC...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGATCGATGGCCTCCTaGCTCAGGGCACCCGTGATA +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHRSMAS*LRAPVI
Trigger: TATCACGGGTGCCCTGAGGCAGGAGGCCATCGATCG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGAACCCGCTTGCCCTTaGCTAGATTCCGGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMEPACP*LDSGLG
Trigger: ACCTAGCCCGGAATCTAGGCAAGGGCAAGCGGGTTC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGGTTTCAGAGCCGTCTaGCCCAGGCTCACACAGATG +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTGFRAV*PRLTQM
Trigger: CATCTGTGTGAGCCTGGGGCAGACGGCTCTGAAACC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTCAATCACCAGCGCCTaGTCCAGGAGCTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDSITSA*SRSLNL
Trigger: GAGGTTCAAGCTCCTGGAGCAGGCGCTGGTGATTGA...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATGGGGTGAGGCTCCGTaGCCTTGCTGGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEWGEAP*PCWPAG
Trigger: GCCGGCTGGCCAGCAAGGGCACGGAGCCTCACCCCA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTGCTGTAATTGGCGCCTaGGGCGGCCAGGGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIAVIGA*GGQGPY
Trigger: GTAGGGGCCCTGGCCGCCGCAGGCGCCAATTACAGC...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGTACTTGGAAGACCCTaGCAGCCATCTCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGVLGRP*QPSPTQ
Trigger: CTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTAC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGTTCCTCCCTCATAACTaGTCCACCCTCCACGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMFLPHN*STLHVG
Trigger: CCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAA...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACGGGTGTTGAAGCCCAGCACCTCAATGTTGCCCCCGACTCGGGCCAGCAGTGGTGCCCTCCACTATTTTaGTCTGGTCCCAACGACAAG +
Preference number: 4 (lower is better)
Translates to: TGVEAQHLNVAPDSGQQWCPPLF*SGPNDK
Trigger: CTTGTCGTTGGGACCAGAGCAAAATAGTGGAGGGCA...CCACTGCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGGCTTCAACACCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTCCTTGGCCTCCCACTaGACCCCCTCCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHSLASH*TPSFSQ
Trigger: CTGTGAGAAGGAGGGGGTCCAGTGGGAGGCCAAGGA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTGCCTGTTGAGGGGCTaGCACTGCTACAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHCLLRG*HCYRWL
Trigger: GAGCCACCTGTAGCAGTGCCAGCCCCTCAACAGGCA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCTGCCTGTTGAGGGGCTaGCACTGCTACAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSCLLRG*HCYRWL
Trigger: GAGCCACCTGTAGCAGTGCCAGCCCCTCAACAGGCA...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCCAGCTGAAGCTCCTTaGCCCAGGAGCAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSPAEAP*PRSSAS
Trigger: ACTGGCACTGCTCCTGGGCCAAGGAGCTTCAGCTGG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACGGGTGTTGAAGCCCAGCACCTCAATGTTGCCCCCGACTCGGGCCAGCAGTGGCCAGGCTCACACAGATaGCGCATGAACAAAGACACA +
Preference number: 4 (lower is better)
Translates to: TGVEAQHLNVAPDSGQQWPGSHR*RMNKDT
Trigger: TGTGTCTTTGTTCATGCGCCATCTGTGTGAGCCTGG...CCACTGCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGGCTTCAACACCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCCGGGTCAACACCTGCTaGCGACTCAGTCCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELRVNTC*RLSPSR
Trigger: TCGGGAGGGACTGAGTCGCCAGCAGGTGTTGACCCG...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCCGGGTCAACACCTGCTaGCGACTCAGTCCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTRVNTC*RLSPSR
Trigger: TCGGGAGGGACTGAGTCGCCAGCAGGTGTTGACCCG...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCTGGCGTCGACTCTGTaGCTGACTTCTCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTLASTL*LTSLCP
Trigger: GGGACAGAGAGAAGTCAGCCACAGAGTCGACGCCAG...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCCTCATCTCGAGGCCCTaGTCGAAGCTCCCGGTCACC +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELLISRP*SKLPVT
Trigger: GGTGACCGGGAGCTTCGACCAGGGCCTCGAGATGAG...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTCGCCCATTGGACCGTaGCTCATCTCGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELSPIGP*LISRPW
Trigger: CCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTGAAGGCGGGCTGCGATaGGGGGTATTCGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSEGGLR*GVFGTA
Trigger: CGCTGTCCCGAATACCCCCCATCGCAGCCCGCCTTC...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCGGGTAGGCCGGTGTaGGGTGAGGCTCCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPAGRPV*GEAPCP
Trigger: AGGGCACGGAGCCTCACCCCACACCGGCCTACCCGC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTTCTTCACAAGCACTaGAGGGCCGTTGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHLLHKH*RAVGGG
Trigger: GCCGCCACCAACGGCCCTCCAGTGCTTGTGAAGAAG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp AGCAGAAGCCTCAGGAGTGGTGGGAGACGTTTTGGTAGGAGAGGAGGCTCTGGACTTCTTCACAAGCACTaGAGGGCCGTTGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SRSLRSGGRRFGRRGGSGLLHKH*RAVGGG
Trigger: GCCGCCACCAACGGCCCTCCAGTGCTTGTGAAGAAG...TCCAGAGCCTCCTCTCCTACCAAAACGTCTCCCACCACTCCTGAGGCTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCTGCAGGGAAACGGCTaGGGAGGCTCCACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSLQGNG*GGSTSF
Trigger: GAAAGAGGTGGAGCCTCCCCAGCCGTTTCCCTGCAG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAAATGTCATCCTTATCTaGCGGCGGGGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGNVILI*RRGRRR
Trigger: CCGCCGCCGCCCCCGCCGCCAGATAAGGATGACATT...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380358.9
CDS-3UTR TCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCACTTCACACCCAATGCTaGCGGCAGCAGCCGAATGTC +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPLHTQC*RQQPNV
Trigger: GACATTCGGCTGCTGCCGTCAGCATTGGGTGTGAAG...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTTCACACCCAATGCTaGCGGCAGCAGCCGAATGTC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHLHTQC*RQQPNV
Trigger: GACATTCGGCTGCTGCCGTCAGCATTGGGTGTGAAG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACACTGCCCCCACTCTCTaGCTTCTCCCGGTACTCATC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHTAPTL*LLPVLI
Trigger: GATGAGTACCGGGAGAAGTCAGAGAGTGGGGGCAGT...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGCCTCAGGGCACCCGTaGTACCACCATCGATGCGCT +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGASGHP*YHHRCA
Trigger: AGCGCATCGATGGTGGTATCACGGGTGCCCTGAGGC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTCTTGGCCACTTGTGTaGTTCGCTCTTCCACTGACG +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDSWPLV*FALPLT
Trigger: CGTCAGTGGAAGAGCGAATCACACAAGTGGCCAAGA...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCCGTCGACTCTGTGGCTaGCTTCTCTCTGTCCCCACG +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELRRLCG*LLSVPT
Trigger: CGTGGGGACAGAGAGAAGTCAGCCACAGAGTCGACG...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTCTGCGCTCGGACATCTaGAGGCGGGCTGCGATGGGG +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPLRSDI*RRAAMG
Trigger: CCCCATCGCAGCCCGCCTTCAGATGTCCGAGCGCAG...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACACAAAGGGCCCTTCTTaGAGAGAGGAGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDTKGPS*REELQR
Trigger: TCTCTGCAGCTCCTCTCTTCAAGAAGGGCCCTTTGT...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTACACAGGAGGTAACTaGGCCAGTGAACGGCACCTT +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDYTGGN*ASERHL
Trigger: AAGGTGCCGTTCACTGGCTCAGTTACCTCCTGTGTA...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTGTTCCACTTGCTTTTaGCCCCCATCTCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHCSTCF*PPSPSP
Trigger: GGGGGAGGGAGATGGGGGGCAAAAGCAAGTGGAACA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCTCCTCCCCGGCCACTaGAGGACAGCCCAGGACCTT +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTILLPGH*RTAQDL
Trigger: AAGGTCCTGGGCTGTCCTGCAGTGGCCGGGGAGGAG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGCTCCCCGCCGTCCTTaGATACGCGGCAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGAPRRP*IRGSTP
Trigger: TGGAGTACTGCCGCGTATGCAAGGACGGCGGGGAGC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTGTGGTAGGAGGAGATaGACGCGTCACAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTCGRRR*TRHSTG
Trigger: TCCTGTGCTGTGACGCGTGCATCTCCTCCTACCACA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGAACCCGCTTGCCCTTaGCTAGATTCCGGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPEPACP*LDSGLG
Trigger: ACCTAGCCCGGAATCTAGGCAAGGGCAAGCGGGTTC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCAGCACCTCAATGTTaGCCCCGACTCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSPAPQC*PRLGPA
Trigger: TGCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGG...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATGCGGGTCAACACCTaGTGGCGACTCAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTMRVNT*WRLSPS
Trigger: GGAGGGACTGAGTCGCCAGCAGGTGTTGACCCGCAT...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CCTTCCACTGCAAGGAAATCCCTACTCTGCTGCGTCAGCCCAATCCGGTCTCCCCCCCGAGGAAATAGCTaGCCGTTCCTCATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PSTARKSLLCCVSPIRSPPRGNS*PFLILP
Trigger: TGGCAGAATGAGGAACGGGCAGCTATTTCCTCGGGG...GGGAGACCGGATTGGGCTGACGCAGCAGAGTAGGGATTTCCTTGCAGTGGAAGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR GCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGATGTCCTGCCACCGTaGATAGCCATGGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDDVLPP*IAMEDN
Trigger: ATTGTCCTCCATGGCTATGCACGGTGGCAGGACATC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTGGTTCAGAACCTTGTaGAGGACGGCGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELWFRTL*RTALAG
Trigger: GCCGGCCAACGCCGTCCTGCACAAGGTTCTGAACCA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCCGGTCTCCCCACTCCTaGAGCTTCGTGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTRSPHS*SFVALH
Trigger: ATGCAGAGCCACGAAGCTGCAGGAGTGGGGAGACCG...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCGGCTCTTCGGATGGGTaGGGGCTGGATATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTGSSDG*GLDISS
Trigger: GCTGCTGATATCCAGCCCCCACCCATCCGAAGAGCC...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGTGCCCTCTTTGGTTTTaGCTCTTCGGATGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMCPLWF*LFGWVG
Trigger: CCCCACCCATCCGAAGAGCCAAAACCAAAGAGGGCA...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGCTCCATTTGCCCTCTaGAGCCCGGTCAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELAPFAL*SPVKLR
Trigger: CCTGAGCTTGACCGGGCTCCAGAGGGCAAATGGAGC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGCCATAGTCCAGGGGTaGGGGCTCATCCATGTCATT +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTAIVQG*GLIHVI
Trigger: AATGACATGGATGAGCCCCCACCCCTGGACTATGGC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGCCATAGTCCAGGGGTaGGGGCTCATCCATGTCATT +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGAIVQG*GLIHVI
Trigger: AATGACATGGATGAGCCCCCACCCCTGGACTATGGC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTGGTTGATGATGCGGTaGACGGTCATCCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTWLMMR*TVIHSG
Trigger: GCCAGAGTGGATGACCGTCCACCGCATCATCAACCA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGTTATACTTGCGGGGCTaGGCAGGGTCTTCCCCCATA +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMLYLRG*AGSSPI
Trigger: TATGGGGGAAGACCCTGCCCAGCCCCGCAAGTATAA...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGACAGGCCCAGCGGATaGAACCAAGTGCTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSDRPSG*NQVLPD
Trigger: ATCAGGCAGCACTTGGTTCCATCCGCTGGGCCTGTC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGTCTCCGCAGCATGTGTaGCCCCAGCAAATCATGCAG +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMSPQHV*PQQIMQ
Trigger: CTGCATGATTTGCTGGGGCCACACATGCTGCGGAGA...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCCTCATAAGCCCCACTaGGGAGTTTGGGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSPHKPH*GVWGTP
Trigger: TGGAGTCCCCCAAACTCCCCAGTGGGGCTTATGAGG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCTCATAAGCCCCACTaGGGAGTTTGGGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHPHKPH*GVWGTP
Trigger: TGGAGTCCCCCAAACTCCCCAGTGGGGCTTATGAGG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGATCCTCAGTTGCATCCTaGTTCCGGTCCAACAGCCGA +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGSSVAS*FRSNSR
Trigger: TCGGCTGTTGGACCGGAACCAGGATGCAACTGAGGA...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTCGCCCATTGGACCGTaGCTCATCTCGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSSPIGP*LISRPW
Trigger: CCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGTATTCGGGACAGCGTaGCTGGCAGGCGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGVFGTA*LAGGSR
Trigger: ACGTGACCCGCCTGCCAGCCACGCTGTCCCGAATAC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGCGGGTAGGCCGGTGTaGGGTGAGGCTCCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIAGRPV*GEAPCP
Trigger: AGGGCACGGAGCCTCACCCCACACCGGCCTACCCGC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCGCATCTGGCTGTAATTaGCGCCTGCGGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFASGCN*RLRRPG
Trigger: CCCTGGCCGCCGCAGGCGCCAATTACAGCCAGATGC...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCCTTCTTCACAAGCACTaGAGGGCCGTTGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELLLHKH*RAVGGG
Trigger: GCCGCCACCAACGGCCCTCCAGTGCTTGTGAAGAAG...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGGTGAAGGGCAGGCCTaGGATCCAGTCAGTCGTCTA +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPGEGQA*DPVSRL
Trigger: TAGACGACTGACTGGATCCCAGGCCTGCCCTTCACC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGTCTTCAAGGCTTGGTaGGAAAGGTGTGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDVFKAW*ERCVGV
Trigger: CACTCCCACACACCTTTCCCACCAAGCCTTGAAGAC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGGCTTCCACCACATCTaGCCCATTGTATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDGFHHI*PIVFSP
Trigger: GGGAGAGAATACAATGGGCCAGATGTGGTGGAAGCC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCACTGCCCCCACTCTCTaGCTTCTCCCGGTACTCATC +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTTAPTL*LLPVLI
Trigger: GATGAGTACCGGGAGAAGTCAGAGAGTGGGGGCAGT...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGGACCTTCGTCGCTCTaGAAAACATACGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMGPSSL*KTYEPP
Trigger: AGGAGGCTCGTATGTTTTTCAGAGCGACGAAGGTCC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCTCCTTCTCACAGTaGGGGCAGCTCCATTTGCCC +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSPSFSQ*GQLHLP
Trigger: GGGCAAATGGAGCTGCCCTCACTGTGAGAAGGAGGG...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGTCATCTGCGAGAAGATaGGCACTCGGTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMSSARR*ALGVLA
Trigger: AGCAAGGACACCGAGTGCTCATCTTCTCGCAGATGA...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGACCCACCGAGTACTCTaGCTGGTTGTCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMTHRVL*LVVLVF
Trigger: GAAGACCAAGACAACCAGTCAGAGTACTCGGTGGGT...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCAGCGCATCACAGCATTaGGGAAAGCCTTCCGCTGAC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSSASQH*GKPSAD
Trigger: GTCAGCGGAAGGCTTTCCTCAATGCTGTGATGCGCT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACCAGCCACTGTGTGGTaGAGGCATCCTGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGPATVW*RHPVVA
Trigger: TGCCACCACAGGATGCCTTCACCACACAGTGGCTGG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACCACACAGATGGCGCATaGACAAAGACACATAGGCCT +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDHTDGA*TKTHRP
Trigger: AGGCCTATGTGTCTTTGTTCATGCGCCATCTGTGTG...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTTCTGCCACAGTGTGTaGAGCTCTGTGAAGCCACCA +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTFCHSV*SSVKPP
Trigger: TGGTGGCTTCACAGAGCTTCACACACTGTGGCAGAA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCCGATCCAGCCCGTCTaGCACCAATGCCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIPIQPV*HQCPHH
Trigger: ATGGTGGGGGCATTGGTGTCAGACGGGCTGGATCGG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CCTTCCACTGCAAGGAAATCCCTACTCTGCTGCGTCAGCCCAATCCGGTCTCCCACAAAGGGCCCTTCTTaGAGAGAGGAGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PSTARKSLLCCVSPIRSPTKGPS*REELQR
Trigger: TCTCTGCAGCTCCTCTCTTCAAGAAGGGCCCTTTGT...GGGAGACCGGATTGGGCTGACGCAGCAGAGTAGGGATTTCCTTGCAGTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGTACACAGGAGGTAACTaGGCCAGTGAACGGCACCTT +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMYTGGN*ASERHL
Trigger: AAGGTGCCGTTCACTGGCTCAGTTACCTCCTGTGTA...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGAGCTCCTCTTTGGCTTaGGGGAGTATCACCCAACCA +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMSSSLA*GSITQP
Trigger: TGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCT...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGATCTGTATCCAGGCCTTaGGGAGGGAGGGTAGTAGAA +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGSVSRP*GGRVVE
Trigger: TTCTACTACCCTCCCTCCTCAAGGCCTGGATACAGA...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGACCAGGAGTGGGTGTaGAGAGAGACTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELDQEWV*RETGKG
Trigger: CCCTTTCCCAGTCTCTCTTCACACCCACTCCTGGTC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATCCTCAGAGAACACATaGTCCACATCCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPSSENT*STSSRP
Trigger: GGGCCTGGAGGATGTGGAGCATGTGTTCTCTGAGGA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTATGGCCTGGACCTTTaGCCTCTTTGGTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDYGLDL*PLWFWL
Trigger: GAGCCAAAACCAAAGAGGGCAAAGGTCCAGGCCATA...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTTCCCCGAAGCTTCTTaGGTCCATCAGGCACTCGGG +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELFPEAS*VHQALG
Trigger: CCCGAGTGCCTGATGGACGCAAGAAGCTTCGGGGAA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGAGGCACTGTGGACACTaGCACTGTCCAGGTCTGATT +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMRHCGH*HCPGLI
Trigger: AATCAGACCTGGACAGTGGCAGTGTCCACAGTGCCT...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGATCTTTAGTTTCTTGGTaGGGACAGGGCCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGSLVSW*GQGHQA
Trigger: GGCCTGATGGCCCTGTCCGCACCAAGAAACTAAAGA...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTCAGCACGGGGCATGTaGATCGGGGACACAGCCATT +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTSARGM*IGDTAI
Trigger: AATGGCTGTGTCCCCGATGCACATGCCCCGTGCTGA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCATCTGGATTTCCATCTaGCTGTTGAGGGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTIWISI*LLRGWH
Trigger: GTGCCAGCCCCTCAACAGGCAGATGGAAATCCAGAT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCATGTCGTCAAGCTCCTaGTTGGACATGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSMSSSS*LDMEPA
Trigger: GGCAGGCTCCATGTCCAAGCAGGAGCTTGACGACAT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGAACCCGCTTGCCCTTaGCTAGATTCCGGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELEPACP*LDSGLG
Trigger: ACCTAGCCCGGAATCTAGGCAAGGGCAAGCGGGTTC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGCTTGCGAACCCGCTTaGCCTTGCCTAGATTCCGGG +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGACEPA*PCLDSG
Trigger: CCCGGAATCTAGGCAAGGGCAAGCGGGTTCGCAAGC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTGCTTGCGAACCCGCTTaGCCTTGCCTAGATTCCGGG +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSACEPA*PCLDSG
Trigger: CCCGGAATCTAGGCAAGGGCAAGCGGGTTCGCAAGC...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCACCCCGAGGAAATAGCTaGCCGTTCCTCATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPPRGNS*PFLILP
Trigger: TGGCAGAATGAGGAACGGGCAGCTATTTCCTCGGGG...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTCAATCACCAGCGCCTaGTCCAGGAGCTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHSITSA*SRSLNL
Trigger: GAGGTTCAAGCTCCTGGAGCAGGCGCTGGTGATTGA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATCAATCACCAGCGCCTaGTCCAGGAGCTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPSITSA*SRSLNL
Trigger: GAGGTTCAAGCTCCTGGAGCAGGCGCTGGTGATTGA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGCTGTAATTGGCGCCTaGGGCGGCCAGGGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIAVIGA*GGQGPY
Trigger: GTAGGGGCCCTGGCCGCCGCAGGCGCCAATTACAGC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCGTTCGCCATGCAAACTaGCACTCTCCCCGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFVRHAN*HSPRPL
Trigger: GAGGGGCCGGGGAGAGTGGCAGTTTGCATGGCGAAC...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCAGGGTGCTATGGGGGTaGCCGACGAGACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFRVLWG*PTRQQL
Trigger: CAGCTGCTGTCTCGTCGGCCACCCCCATAGCACCCT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGTCCGGAGGGTGCTATaGGGGTGGCCGACGAGACAG +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPVRRVL*GWPTRQ
Trigger: CTGTCTCGTCGGCCACCCCCATAGCACCCTCCGGAC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCTGCCCTCTTTGGTTTTaGCTCTTCGGATGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSCPLWF*LFGWVG
Trigger: CCCCACCCATCCGAAGAGCCAAAACCAAAGAGGGCA...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATGCCCTCTTTGGTTTTaGCTCTTCGGATGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPCPLWF*LFGWVG
Trigger: CCCCACCCATCCGAAGAGCCAAAACCAAAGAGGGCA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGATTACTCCGCCTCTTATaGCCTGGACCTTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGLLRLL*PGPLPS
Trigger: AGAGGGCAAAGGTCCAGGCCATAAGAGGCGGAGTAA...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTTACTCCGCCTCTTATaGCCTGGACCTTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTLLRLL*PGPLPS
Trigger: AGAGGGCAAAGGTCCAGGCCATAAGAGGCGGAGTAA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTCCTTGGCCTCCCACTaGACCCCCTCCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSSLASH*TPSFSQ
Trigger: CTGTGAGAAGGAGGGGGTCCAGTGGGAGGCCAAGGA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGACAGCCATTCACCATTaGGAATGTCAGGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMTAIHH*ECQAGE
Trigger: CTCCCCTGCCTGACATTCCCAATGGTGAATGGCTGT...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGCCATAGTCCAGGGGTaGGGGCTCATCCATGTCATT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSAIVQG*GLIHVI
Trigger: AATGACATGGATGAGCCCCCACCCCTGGACTATGGC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTCCTCCCACGTGGACTaGTCATATGGTAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTSSHVD*SYGKSL
Trigger: GAGGGACTTACCATATGACCAGTCCACGTGGGAGGA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCGACAGGCCCAGCGGATaGAACCAAGTGCTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTDRPSG*NQVLPD
Trigger: ATCAGGCAGCACTTGGTTCCATCCGCTGGGCCTGTC...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATCTCCGCAGCATGTGTaGCCCCAGCAAATCATGCAG +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPSPQHV*PQQIMQ
Trigger: CTGCATGATTTGCTGGGGCCACACATGCTGCGGAGA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCGGGTCAACACCTGCTaGCGACTCAGTCCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFRVNTC*RLSPSR
Trigger: TCGGGAGGGACTGAGTCGCCAGCAGGTGTTGACCCG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCTCATCTCGAGGCCCTaGTCGAAGCTCCCGGTCACC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFLISRP*SKLPVT
Trigger: GGTGACCGGGAGCTTCGACCAGGGCCTCGAGATGAG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTCGCCCATTGGACCGTaGCTCATCTCGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTISPIGP*LISRPW
Trigger: CCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCGTATTCGGGACAGCGTaGCTGGCAGGCGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFVFGTA*LAGGSR
Trigger: ACGTGACCCGCCTGCCAGCCACGCTGTCCCGAATAC...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGGTGAAGGGCAGGCCTaGGATCCAGTCAGTCGTCTA +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELGEGQA*DPVSRL
Trigger: TAGACGACTGACTGGATCCCAGGCCTGCCCTTCACC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CCTTCCACTGCAAGGAAATCCCTACTCTGCTGCGTCAGCCCAATCCGGTCTCCCGTCTTCAAGGCTTGGTaGGAAAGGTGTGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PSTARKSLLCCVSPIRSPVFKAW*ERCVGV
Trigger: CACTCCCACACACCTTTCCCACCAAGCCTTGAAGAC...GGGAGACCGGATTGGGCTGACGCAGCAGAGTAGGGATTTCCTTGCAGTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACACAGTCTTCAAGGCTTaGTGGGAAAGGTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDTVFKA*WERCVG
Trigger: TCCCACACACCTTTCCCACCAAGCCTTGAAGACTGT...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCTGCAGGGAAACGGCTaGGGAGGCTCCACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSLQGNG*GGSTSF
Trigger: GAAAGAGGTGGAGCCTCCCCAGCCGTTTCCCTGCAG...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACTGCAGGGAAACGGCTaGGGAGGCTCCACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGLQGNG*GGSTSF
Trigger: GAAAGAGGTGGAGCCTCCCCAGCCGTTTCCCTGCAG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGTCCCTAGAACAGGTTaGGGAGCTCCTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTVPRTG*GAPLWL
Trigger: AAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGAC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CTGGCACCTCATCCTCTAGAGGAATCTTCCTTGGCTCCAGCCGCTCCCCAAGTGGGCTTCCACCACATCTaGCCCATTGTATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LAPHPLEESSLAPAAPQVGFHHI*PIVFSP
Trigger: GGGAGAGAATACAATGGGCCAGATGTGGTGGAAGCC...CACTTGGGGAGCGGCTGGAGCCAAGGAAGATTCCTCTAGAGGATGAGGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp GTCAGTCGTCTATACAGATCACCTCCCCGGCTCGGGGCTCCTTCCGATCCAGCCTCCACTATTTTGCTCTaGTCCCAACGACAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: VSRLYRSPPRLGAPSDPASTILL*SQRQGS
Trigger: GCTACCTTGTCGTTGGGACCAGAGCAAAATAGTGGA...GGCTGGATCGGAAGGAGCCCCGAGCCGGGGAGGTGATCTGTATAGACGACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CAA 72 bp GGAGCTGGAGTAGCAGGTTTAGAGGTGCAGGGACTGTaGGTAGCAGAAGCCTCAGGAGTGGTGGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: GAGVAGLEVQGL*VAEASGVVGDV
Trigger: AACGTCTCCCACCACTCCTGAGGCTTCTGCTACCAACAGTCCCTGCACCTCTAAACCTGCTACTCCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR TCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCGACGAGACAGCAGCTaGCACCTGCTCAGCTACAGC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFRRDSS*HLLSYS
Trigger: GCTGTAGCTGAGCAGGTGTCAGCTGCTGTCTCGTCG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGGACCTTCGTCGCTCTaGAAAACATACGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPGPSSL*KTYEPP
Trigger: AGGAGGCTCGTATGTTTTTCAGAGCGACGAAGGTCC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCCCTCCTTCTCACAGTaGGGGCAGCTCCATTTGCCC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFPSFSQ*GQLHLP
Trigger: GGGCAAATGGAGCTGCCCTCACTGTGAGAAGGAGGG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCCCTCCTTCTCACAGTaGGGGCAGCTCCATTTGCCC +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIPSFSQ*GQLHLP
Trigger: GGGCAAATGGAGCTGCCCTCACTGTGAGAAGGAGGG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAAAAGAACTCTCGCTCTaGTCTGCCTTGAAGAGGACG +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGKELSL*SALKRT
Trigger: CGTCCTCTTCAAGGCAGATCAGAGCGAGAGTTCTTT...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTGGAAGATTTCCAGCTaGAGCTCCTTGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELWKISS*SSLAQE
Trigger: CTCCTGGGCCAAGGAGCTTCAGCTGGAAATCTTCCA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATTCAGCCCTTCCAACTaGTACATGTGCAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPFSPSN*YMCRVP
Trigger: AGGCACCCTGCACATGTATCAGTTGGAAGGGCTGAA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTTCAGCCCTTCCAACTaGTACATGTGCAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHFSPSN*YMCRVP
Trigger: AGGCACCCTGCACATGTATCAGTTGGAAGGGCTGAA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGAACCAAGTGCTGCCTaGTCAATGGTGATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMEPSAA*SMVISS
Trigger: TGAGCTGATCACCATTGATCAGGCAGCACTTGGTTC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGAACCAAGTGCTGCCTaGTCAATGGTGATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTEPSAA*SMVISS
Trigger: TGAGCTGATCACCATTGATCAGGCAGCACTTGGTTC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTGCTCCACCCGAACGATaGGCTCTGTCTTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIAPPER*ALSWLA
Trigger: TGCCAGCCAAGACAGAGCTCATCGTTCGGGTGGAGC...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGCCTCAGGGCACCCGTaGTACCACCATCGATGCGCT +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEASGHP*YHHRCA
Trigger: AGCGCATCGATGGTGGTATCACGGGTGCCCTGAGGC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGCCTGGCCAATCCGATaGGCCCGGCTAAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIAWPIR*ARLKAW
Trigger: CCAGGCCTTTAGCCGGGCTCATCGGATTGGCCAGGC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATCTTGGCCACTTGTGTaGTTCGCTCTTCCACTGACG +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPSWPLV*FALPLT
Trigger: CGTCAGTGGAAGAGCGAATCACACAAGTGGCCAAGA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCCACCGAGTACTCTaGCTGGTTGTCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPTHRVL*LVVLVF
Trigger: GAAGACCAAGACAACCAGTCAGAGTACTCGGTGGGT...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCCGGAGCTGCCTCTTTaGCTGTCTACGCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIPELPL*LSTPFR
Trigger: CCTGAAGGGCGTAGACAGTCAAAGAGGCAGCTCCGG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTCCGCTGACGGGTGTTaGAGCCCAGCACCTCAATGT +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSSADGC*SPAPQC
Trigger: ACATTGAGGTGCTGGGCTTCAACACCCGTCAGCGGA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGCACACAGATGGCGCATaGACAAAGACACATAGGCCT +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMHTDGA*TKTHRP
Trigger: AGGCCTATGTGTCTTTGTTCATGCGCCATCTGTGTG...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCATCAGTTCCGGCATTaGCCAACGCCCATTGATGTG +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSHQFRH*PTPIDV
Trigger: CACATCAATGGGCGTTGGTCAATGCCGGAACTGATG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCGTCGACTCTGTGGCTaGCTTCTCTCTGTCCCCACG +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIRRLCG*LLSVPT
Trigger: CGTGGGGACAGAGAGAAGTCAGCCACAGAGTCGACG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGTGTGTGAAGCTCTGTaGAGCCACCATCGGCGATAT +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPVCEAL*SHHRRY
Trigger: ATATCGCCGATGGTGGCTTCACAGAGCTTCACACAC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGTGTGTGAAGCTCTGTaGAGCCACCATCGGCGATAT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSVCEAL*SHHRRY
Trigger: ATATCGCCGATGGTGGCTTCACAGAGCTTCACACAC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTCCACTTCCACATaGGACAGAGCTGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDFSTST*DRADSA
Trigger: TGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAA...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATACACAGGAGGTAACTaGGCCAGTGAACGGCACCTT +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPYTGGN*ASERHL
Trigger: AAGGTGCCGTTCACTGGCTCAGTTACCTCCTGTGTA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTACACAGGAGGTAACTaGGCCAGTGAACGGCACCTT +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHYTGGN*ASERHL
Trigger: AAGGTGCCGTTCACTGGCTCAGTTACCTCCTGTGTA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTGACCAGGAGTGGGTGTaGAGAGAGACTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSDQEWV*RETGKG
Trigger: CCCTTTCCCAGTCTCTCTTCACACCCACTCCTGGTC...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCAGGATCACAGTGTCTaGCGCCTTCATCACACAGGA +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHQDHSV*RLHHTG
Trigger: TCCTGTGTGATGAAGGCGGCAGACACTGTGATCCTG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTGTTCCACTTGCTTTTaGCCCCCATCTCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSCSTCF*PPSPSP
Trigger: GGGGGAGGGAGATGGGGGGCAAAAGCAAGTGGAACA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTCCTCAGAGAACACATaGTCCACATCCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELSSENT*STSSRP
Trigger: GGGCCTGGAGGATGTGGAGCATGTGTTCTCTGAGGA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTCTGCTCAGCTACAGCTaGTGCTGCTGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPLLSYS*CCCCRC
Trigger: GCAGCGGCAGCAGCAGCAGCAGCTGTAGCTGAGCAG...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATTCCCCGAAGCTTCTTaGGTCCATCAGGCACTCGGG +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGFPEAS*VHQALG
Trigger: CCCGAGTGCCTGATGGACGCAAGAAGCTTCGGGGAA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCAGGCACTGTGGACACTaGCACTGTCCAGGTCTGATT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSRHCGH*HCPGLI
Trigger: AATCAGACCTGGACAGTGGCAGTGTCCACAGTGCCT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTCTTTAGTTTCTTGGTaGGGACAGGGCCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHSLVSW*GQGHQA
Trigger: GGCCTGATGGCCCTGTCCGCACCAAGAAACTAAAGA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTGAGGGCAGCTCCATTTaGCCTCTGGAGCCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIEGSSI*PLEPGQ
Trigger: TTGACCGGGCTCCAGAGGGCAAATGGAGCTGCCCTC...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACAATGTAGGATCTTCTaGACTCGACCCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGQCRIF*TRPFST
Trigger: CGTGCTGAAGGGTCGAGTGCAGAAGATCCTACATTG...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCATCTGGATTTCCATCTaGCTGTTGAGGGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSIWISI*LLRGWH
Trigger: GTGCCAGCCCCTCAACAGGCAGATGGAAATCCAGAT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGATGGAACCAAGTGCTaGCTGATCAATGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDDGTKC*LINGDQ
Trigger: CTGATCACCATTGATCAGGCAGCACTTGGTTCCATC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTCCTCCAGATTATTCTaGAATGGGGTTCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDSSRLF*NGVPVS
Trigger: GCTGACAGGAACCCCATTGCAGAATAATCTGGAGGA...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAAGACGACTTAATAAGTaGCCCACCCTCATAAGCCCC +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGRRLNK*PTLISP
Trigger: GGGGCTTATGAGGGTGGGGCACTTATTAAGTCGTCT...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCAGACGACTTAATAAGTaGCCCACCCTCATAAGCCCC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTRRLNK*PTLISP
Trigger: GGGGCTTATGAGGGTGGGGCACTTATTAAGTCGTCT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCAGCACTCGGTGTCCTTaGTCCTTCAGCTTTCGCAGC +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELSTRCP*SFSFRS
Trigger: GCTGCGAAAGCTGAAGGAGCAAGGACACCGAGTGCT...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGAACCCGCTTGCCCTTaGCTAGATTCCGGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGEPACP*LDSGLG
Trigger: ACCTAGCCCGGAATCTAGGCAAGGGCAAGCGGGTTC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGATTCTCATTCCGGAGCTaGCTCTTTGACTGTCTACGC +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGFSFRS*LFDCLR
Trigger: GCGTAGACAGTCAAAGAGGCAGCTCCGGAATGAGAA...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTTCTCATTCCGGAGCTaGCTCTTTGACTGTCTACGC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTFSFRS*LFDCLR
Trigger: GCGTAGACAGTCAAAGAGGCAGCTCCGGAATGAGAA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAACCAGCACCTCAATGTTaGCCCCGACTCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEPAPQC*PRLGPA
Trigger: TGCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGG...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTGGTTTCAGAGCCGTCTaGCCCAGGCTCACACAGATG +
Preference number: 4 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLGFRAV*PRLTQM
Trigger: CATCTGTGTGAGCCTGGGGCAGACGGCTCTGAAACC...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTATGCGGGTCAACACCTaGTGGCGACTCAGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIMRVNT*WRLSPS
Trigger: GGAGGGACTGAGTCGCCAGCAGGTGTTGACCCGCAT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGCAACGCCCATTGATGTaGTCAAACTCCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMQRPLM*SNSCTF
Trigger: GAAGGTGCAGGAGTTTGAGCACATCAATGGGCGTTG...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATTCCTCCCTCATAACTaGTCCACCCTCCACGTGGGG +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGFLPHN*STLHVG
Trigger: CCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTGCCCTCCACTATTTTaGTCTGGTCCCAACGACAAG +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTCPPLF*SGPNDK
Trigger: CTTGTCGTTGGGACCAGAGCAAAATAGTGGAGGGCA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCAAATCCCTACTCTGCTaGGTCAGCCCAATCCGGTCT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSKSLLC*VSPIRS
Trigger: AGACCGGATTGGGCTGACGCAGCAGAGTAGGGATTT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATCTCCCTGCTCCCTTTaGGAACTAGGGGGCCATACC +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGSPCSL*ELGGHT
Trigger: GGTATGGCCCCCTAGTTCCCAAAGGGAGCAGGGAGA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACACCCCAACACAGTCCTaGAGGAAAAGAAATCCTCAG +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDTPTQS*RKRNPQ
Trigger: CTGAGGATTTCTTTTCCTCCAGGACTGTGTTGGGGT...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAACGGATGGGTGGGGGCTaGATATCAGCAGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEERMGGG*ISAAGG
Trigger: ACCCCCTGCTGCTGATATCCAGCCCCCACCCATCCG...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGACCTTTGCCCTCTTTaGTTTTGGCTCTTCGGATGG +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGDLCPL*FWLFGW
Trigger: CCATCCGAAGAGCCAAAACCAAAGAGGGCAAAGGTC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCCCGCCTCTTATGGCCTaGACCTTTGCCCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTPPLMA*TFALFG
Trigger: ACCAAAGAGGGCAAAGGTCCAGGCCATAAGAGGCGG...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCTTACTCCGCCTCTTATaGCCTGGACCTTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSLLRLL*PGPLPS
Trigger: AGAGGGCAAAGGTCCAGGCCATAAGAGGCGGAGTAA...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCTCTCTTTAGTTTCTTaGTGCGGACAGGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTLSLVS*CGQGHQ
Trigger: CTGATGGCCCTGTCCGCACCAAGAAACTAAAGAGAG...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTCCTTGGCCTCCCACTaGACCCCCTCCTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTISLASH*TPSFSQ
Trigger: CTGTGAGAAGGAGGGGGTCCAGTGGGAGGCCAAGGA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACAGACGATGGTTTGTATaGTCTTGCCTAGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDRRWFV*SCLAPS
Trigger: AGATGGGGCTAGGCAAGACCATACAAACCATCGTCT...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTCTCCGCAGCATGTGTaGCCCCAGCAAATCATGCAG +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTSPQHV*PQQIMQ
Trigger: CTGCATGATTTGCTGGGGCCACACATGCTGCGGAGA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACCTCATAAGCCCCACTaGGGAGTTTGGGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGPHKPH*GVWGTP
Trigger: TGGAGTCCCCCAAACTCCCCAGTGGGGCTTATGAGG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGCCCGGCTAAAGGCCTaGATGTCATTATGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELARLKA*MSLWGF
Trigger: GAACCCCCATAATGACATCCAGGCCTTTAGCCGGGC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTCCTCAGTTGCATCCTaGTTCCGGTCCAACAGCCGA +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTSSVAS*FRSNSR
Trigger: TCGGCTGTTGGACCGGAACCAGGATGCAACTGAGGA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGCCAGGCTCACACAGATaGCGCATGAACAAAGACACA +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMPGSHR*RMNKDT
Trigger: TGTGTCTTTGTTCATGCGCCATCTGTGTGAGCCTGG...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACTGGCGTCGACTCTGTaGCTGACTTCTCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGLASTL*LTSLCP
Trigger: GGGACAGAGAGAAGTCAGCCACAGAGTCGACGCCAG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCCTCTCGTCGCCCATTaGACCGTGGCTCATCTCGAG +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIPLVAH*TVAHLE
Trigger: CTCGAGATGAGCCACGGTCCAATGGGCGACGAGAGG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGAAGGCGGGCTGCGATaGGGGGTATTCGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIEGGLR*GVFGTA
Trigger: CGCTGTCCCGAATACCCCCCATCGCAGCCCGCCTTC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGCATCTGGCTGTAATTaGCGCCTGCGGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIASGCN*RLRRPG
Trigger: CCCTGGCCGCCGCAGGCGCCAATTACAGCCAGATGC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGACAGTCTTCAAGGCTTaGTGGGAAAGGTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMTVFKA*WERCVG
Trigger: TCCCACACACCTTTCCCACCAAGCCTTGAAGACTGT...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGGCTTCCACCACATCTaGCCCATTGTATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSGFHHI*PIVFSP
Trigger: GGGAGAGAATACAATGGGCCAGATGTGGTGGAAGCC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTCCTGAGCCCCAGAGCTaGGCTTCCACCACATCTGGC +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPPEPQS*ASTTSG
Trigger: GCCAGATGTGGTGGAAGCCCAGCTCTGGGGCTCAGG...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCTTCACACCCAATGCTaGCGGCAGCAGCCGAATGTC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFLHTQC*RQQPNV
Trigger: GACATTCGGCTGCTGCCGTCAGCATTGGGTGTGAAG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCACTGCCCCCACTCTCTaGCTTCTCCCGGTACTCATC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFTAPTL*LLPVLI
Trigger: GATGAGTACCGGGAGAAGTCAGAGAGTGGGGGCAGT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTCGCCACAGCAGCTGCTaGCCCCTTGAAGGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPRHSSC*PLEGVV
Trigger: AACAACCCCTTCAAGGGGTCAGCAGCTGCTGTGGCG...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTCGACGAGACAGCAGCTaGCACCTGCTCAGCTACAGC +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPRRDSS*HLLSYS
Trigger: GCTGTAGCTGAGCAGGTGTCAGCTGCTGTCTCGTCG...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGGACCTTCGTCGCTCTaGAAAACATACGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELGPSSL*KTYEPP
Trigger: AGGAGGCTCGTATGTTTTTCAGAGCGACGAAGGTCC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCAAAGAACTCTCGCTCTaGTCTGCCTTGAAGAGGACG +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSKELSL*SALKRT
Trigger: CGTCCTCTTCAAGGCAGATCAGAGCGAGAGTTCTTT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATGGAAGATTTCCAGCTaGAGCTCCTTGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGWKISS*SSLAQE
Trigger: CTCCTGGGCCAAGGAGCTTCAGCTGGAAATCTTCCA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGTGATAAACCGTGGCTaGGTCTCATATTTCACGGTA +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDVINRG*VSYFTV
Trigger: TACCGTGAAATATGAGACTCAGCCACGGTTTATCAC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGCTGCCTGATCAATGGTaGTCAGCTCATACGATGTCA +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMLPDQW*SAHTMS
Trigger: TGACATCGTATGAGCTGATCACCATTGATCAGGCAG...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGCTCCACCCGAACGATaGGCTCTGTCTTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEAPPER*ALSWLA
Trigger: TGCCAGCCAAGACAGAGCTCATCGTTCGGGTGGAGC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGTTCCCACCACCTCGTaGATTCAAGGCCTCAAAATT +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMVPTTS*IQGLKI
Trigger: AATTTTGAGGCCTTGAATTCACGAGGTGGTGGGAAC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCACCCACCGAGTACTCTaGCTGGTTGTCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTTHRVL*LVVLVF
Trigger: GAAGACCAAGACAACCAGTCAGAGTACTCGGTGGGT...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTCCAGCCACTGTGTGGTaGAGGCATCCTGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPPATVW*RHPVVA
Trigger: TGCCACCACAGGATGCCTTCACCACACAGTGGCTGG...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATTGACCAACGCCCATTaGTGTGCTCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPLTNAH*CAQTPA
Trigger: TGCAGGAGTTTGAGCACATCAATGGGCGTTGGTCAA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTTCTGCCACAGTGTGTaGAGCTCTGTGAAGCCACCA +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTFCHSV*SSVKPP
Trigger: TGGTGGCTTCACAGAGCTTCACACACTGTGGCAGAA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCCGATCCAGCCCGTCTaGCACCAATGCCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIPIQPV*HQCPHH
Trigger: ATGGTGGGGGCATTGGTGTCAGACGGGCTGGATCGG...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTCTGTATCCAGGCCTTaGGGAGGGAGGGTAGTAGAA +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELSVSRP*GGRVVE
Trigger: TTCTACTACCCTCCCTCCTCAAGGCCTGGATACAGA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGGTTCCATATTCACTaGCCCCACTCTCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHRFHIH*PHSLTS
Trigger: AGAAGTCAGAGAGTGGGGGCAGTGAATATGGAACCG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATATGGCCTGGACCTTTaGCCTCTTTGGTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPYGLDL*PLWFWL
Trigger: GAGCCAAAACCAAAGAGGGCAAAGGTCCAGGCCATA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTCTTTAGTTTCTTGGTaGGGACAGGGCCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELSLVSW*GQGHQA
Trigger: GGCCTGATGGCCCTGTCCGCACCAAGAAACTAAAGA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTCAGCACGGGGCATGTaGATCGGGGACACAGCCATT +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTISARGM*IGDTAI
Trigger: AATGGCTGTGTCCCCGATGCACATGCCCCGTGCTGA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTCGATCGATGGCCTCCTaGCTCAGGGCACCCGTGATA +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPRSMAS*LRAPVI
Trigger: TATCACGGGTGCCCTGAGGCAGGAGGCCATCGATCG...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTCCACATTCTCCTCCTaGTTGATGATCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTSTFSS*LMISRS
Trigger: TGAGCGAGAGATCATCAAGCAGGAGGAGAATGTGGA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTGGCACCTCATCCTCTAGAGGAATCTTCCTTGGCTCCAGCCGCTCCCCAAGTGTCCACATTCTCCTCCTaGTTGATGATCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: LAPHPLEESSLAPAAPQVSTFSS*LMISRS
Trigger: TGAGCGAGAGATCATCAAGCAGGAGGAGAATGTGGA...CACTTGGGGAGCGGCTGGAGCCAAGGAAGATTCCTCTAGAGGATGAGGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCTTGCGAACCCGCTTaGCCTTGCCTAGATTCCGGG +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPACEPA*PCLDSG
Trigger: CCCGGAATCTAGGCAAGGGCAAGCGGGTTCGCAAGC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCACAACGCCCATTGATGTaGTCAAACTCCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPQRPLM*SNSCTF
Trigger: GAAGGTGCAGGAGTTTGAGCACATCAATGGGCGTTG...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCAACGCCCATTGATGTaGTCAAACTCCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHQRPLM*SNSCTF
Trigger: GAAGGTGCAGGAGTTTGAGCACATCAATGGGCGTTG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCGATGTCCTGCCACCGTaGATAGCCATGGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTDVLPP*IAMEDN
Trigger: ATTGTCCTCCATGGCTATGCACGGTGGCAGGACATC...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATCAATCACCAGCGCCTaGTCCAGGAGCTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGSITSA*SRSLNL
Trigger: GAGGTTCAAGCTCCTGGAGCAGGCGCTGGTGATTGA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATGGTTCAGAACCTTGTaGAGGACGGCGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEWFRTL*RTALAG
Trigger: GCCGGCCAACGCCGTCCTGCACAAGGTTCTGAACCA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTTCCTCCCTCATAACTaGTCCACCCTCCACGTGGGG +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFFLPHN*STLHVG
Trigger: CCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCATTCCCAACACAAGATaGCGGTACACAGGAGGTAAC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTIPNTR*RYTGGN
Trigger: GTTACCTCCTGTGTACCGGCATCTTGTGTTGGGAAT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAATTCCCAACACAAGATaGCGGTACACAGGAGGTAAC +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGIPNTR*RYTGGN
Trigger: GTTACCTCCTGTGTACCGGCATCTTGTGTTGGGAAT...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTGCCCTCCACTATTTTaGTCTGGTCCCAACGACAAG +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHCPPLF*SGPNDK
Trigger: CTTGTCGTTGGGACCAGAGCAAAATAGTGGAGGGCA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CCAGGTTCAGGCTCCATCTCTCCAGGCACCCCTGGCACCTCATCCTCTAGAGGATACCAGTACTGTCTGTaGCTACGTTTCTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PGSGSISPGTPGTSSSRGYQYCL*LRFSLK
Trigger: CTTCAGAGAGAAACGTAGGCACAGACAGTACTGGTA...TCCTCTAGAGGATGAGGTGCCAGGGGTGCCTGGAGAGATGGAGCCTGAACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTTTTGGCTCTTCGGATaGGTGGGGGCTGGATATCAG +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTFWLFG*VGAGYQ
Trigger: CTGATATCCAGCCCCCACCCATCCGAAGAGCCAAAA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGACCTTTGCCCTCTTTaGTTTTGGCTCTTCGGATGG +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPDLCPL*FWLFGW
Trigger: CCATCCGAAGAGCCAAAACCAAAGAGGGCAAAGGTC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACGACCTTTGCCCTCTTTaGTTTTGGCTCTTCGGATGG +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHDLCPL*FWLFGW
Trigger: CCATCCGAAGAGCCAAAACCAAAGAGGGCAAAGGTC...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCTCCATTTGCCCTCTaGAGCCCGGTCAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPAPFAL*SPVKLR
Trigger: CCTGAGCTTGACCGGGCTCCAGAGGGCAAATGGAGC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCACAGCCATTCACCATTaGGAATGTCAGGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTTAIHH*ECQAGE
Trigger: CTCCCCTGCCTGACATTCCCAATGGTGAATGGCTGT...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTCCAGCTGAAGCTCCTTaGCCCAGGAGCAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPPAEAP*PRSSAS
Trigger: ACTGGCACTGCTCCTGGGCCAAGGAGCTTCAGCTGG...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTGGTTGATGATGCGGTaGACGGTCATCCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSWLMMR*TVIHSG
Trigger: GCCAGAGTGGATGACCGTCCACCGCATCATCAACCA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTCCTCCCACGTGGACTaGTCATATGGTAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTSSHVD*SYGKSL
Trigger: GAGGGACTTACCATATGACCAGTCCACGTGGGAGGA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATTATACTTGCGGGGCTaGGCAGGGTCTTCCCCCATA +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGLYLRG*AGSSPI
Trigger: TATGGGGGAAGACCCTGCCCAGCCCCGCAAGTATAA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGATGTCAGGAGAACATaGAACTTCACCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSDVRRT*NFTCAS
Trigger: GGAGGCACAGGTGAAGTTCCATGTTCTCCTGACATC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTGACAGGCCCAGCGGATaGAACCAAGTGCTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIDRPSG*NQVLPD
Trigger: ATCAGGCAGCACTTGGTTCCATCCGCTGGGCCTGTC...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGCCCGGCTAAAGGCCTaGATGTCATTATGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGARLKA*MSLWGF
Trigger: GAACCCCCATAATGACATCCAGGCCTTTAGCCGGGC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACCAACAGCCGAGCGATaGCCTCATTGTCATAATGAA +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGPTAER*PHCHNE
Trigger: TTCATTATGACAATGAGGCCATCGCTCGGCTGTTGG...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CCTTCCACTGCAAGGAAATCCCTACTCTGCTGCGTCAGCCCAATCCGGTCTCCCCCAACAGCCGAGCGATaGCCTCATTGTCATAATGAA +
Preference number: 4 (lower is better)
Translates to: PSTARKSLLCCVSPIRSPPTAER*PHCHNE
Trigger: TTCATTATGACAATGAGGCCATCGCTCGGCTGTTGG...GGGAGACCGGATTGGGCTGACGCAGCAGAGTAGGGATTTCCTTGCAGTGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCCTGAGCCCCAGAGCTaGGCTTCCACCACATCTGGC +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIPEPQS*ASTTSG
Trigger: GCCAGATGTGGTGGAAGCCCAGCTCTGGGGCTCAGG...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTCCACTATTTTGCTCTaGTCCCAACGACAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTSTILL*SQRQGS
Trigger: GCTACCTTGTCGTTGGGACCAGAGCAAAATAGTGGA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CTGGCACCTCATCCTCTAGAGGAATCTTCCTTGGCTCCAGCCGCTCCCCAAGTGACTCCTGCAGCTTCGTaGCTCTGCATACATTTTCTG +
Preference number: 4 (lower is better)
Translates to: LAPHPLEESSLAPAAPQVTPAAS*LCIHFL
Trigger: CAGAAAATGTATGCAGAGCCACGAAGCTGCAGGAGT...CACTTGGGGAGCGGCTGGAGCCAAGGAAGATTCCTCTAGAGGATGAGGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CAA 72 bp ATGTGCCCACATTTCCCTAGCCTGCCCTCCACTATTTaGCTCTGGTCCCAACGACAAGGTAGCTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: MCPHFPSLPSTI*LWSQRQGSSQD
Trigger: GTCTTGGGAGCTACCTTGTCGTTGGGACCAGAGCAAAATAGTGGAGGGCAGGCTAGGGAAATGTGGGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCACTGTCCAGGTCTaGTTCCTCAGCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPATVQV*FLSLWF
Trigger: GAACCAGAGGCTGAGGAATCAGACCTGGACAGTGGC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCAAAGAACTCTCGCTCTaGTCTGCCTTGAAGAGGACG +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTKELSL*SALKRT
Trigger: CGTCCTCTTCAAGGCAGATCAGAGCGAGAGTTCTTT...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATTCAGCCCTTCCAACTaGTACATGTGCAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGFSPSN*YMCRVP
Trigger: AGGCACCCTGCACATGTATCAGTTGGAAGGGCTGAA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCCTTTCTTGCCCCCTTTaGTGGCATTGTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTLSCPL*WHCPQR
Trigger: CCTTTGAGGACAATGCCATCAAAGGGGGCAAGAAAG...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCGAACCAAGTGCTGCCTaGTCAATGGTGATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTEPSAA*SMVISS
Trigger: TGAGCTGATCACCATTGATCAGGCAGCACTTGGTTC...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACGTTCCCACCACCTCGTaGATTCAAGGCCTCAAAATT +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHVPTTS*IQGLKI
Trigger: AATTTTGAGGCCTTGAATTCACGAGGTGGTGGGAAC...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATCCGCTGACGGGTGTTaGAGCCCAGCACCTCAATGT +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEESADGC*SPAPQC
Trigger: ACATTGAGGTGCTGGGCTTCAACACCCGTCAGCGGA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCAGCGCATCACAGCATTaGGGAAAGCCTTCCGCTGAC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFSASQH*GKPSAD
Trigger: GTCAGCGGAAGGCTTTCCTCAATGCTGTGATGCGCT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTTGACCAACGCCCATTaGTGTGCTCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTLTNAH*CAQTPA
Trigger: TGCAGGAGTTTGAGCACATCAATGGGCGTTGGTCAA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGTGTGTGAAGCTCTGTaGAGCCACCATCGGCGATAT +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGVCEAL*SHHRRY
Trigger: ATATCGCCGATGGTGGCTTCACAGAGCTTCACACAC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTCACATGAGACAGAGCTaGTTCTGCAGGGAAACGGCT +
Preference number: 4 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLHMRQS*FCRETA
Trigger: AGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTG...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR TCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTTCTCCACTTCCACATaGGACAGAGCTGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHFSTST*DRADSA
Trigger: TGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGACCAGGAGTGGGTGTaGAGAGAGACTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPDQEWV*RETGKG
Trigger: CCCTTTCCCAGTCTCTCTTCACACCCACTCCTGGTC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTCCTCAGAGAACACATaGTCCACATCCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFSSENT*STSSRP
Trigger: GGGCCTGGAGGATGTGGAGCATGTGTTCTCTGAGGA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTGTGGTAGGAGGAGATaGACGCGTCACAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTICGRRR*TRHSTG
Trigger: TCCTGTGCTGTGACGCGTGCATCTCCTCCTACCACA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTATCTGGATTTCCATCTaGCTGTTGAGGGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSIWISI*LLRGWH
Trigger: GTGCCAGCCCCTCAACAGGCAGATGGAAATCCAGAT...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTCTTCTTCTTATACTTaGGGGGCTGGGCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTSSSYT*GAGQGL
Trigger: AAGACCCTGCCCAGCCCCGCAAGTATAAGAAGAAGA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCATGTCGTCAAGCTCCTaGTTGGACATGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFMSSSS*LDMEPA
Trigger: GGCAGGCTCCATGTCCAAGCAGGAGCTTGACGACAT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTGTCAGTGTCCTCAGTTaGATCCTGGTTCCGGTCCAA +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSVSVLS*ILVPVQ
Trigger: TTGGACCGGAACCAGGATGCAACTGAGGACACTGAC...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTACTCATTCATGTTCTaGACGTCAGTGTCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDYSFMF*TSVSSV
Trigger: AACTGAGGACACTGACGTGCAGAACATGAATGAGTA...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAAGAGGTGTCCTTATaGCTTCTCCTTTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTQEVSL*LLLSHL
Trigger: CAAGTGAGAAAGGAGAAGGCATAAGGACACCTCTTG...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGATTACATCTTCTCTCTTaGCCAAATCCCCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGLHLLS*PNPLFP
Trigger: GGGAAACAGGGGATTTGGGCAAGAGAGAAGATGTAA...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000380358.9
CDS-3UTR GCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCCCCGAGGAAATAGCTaGCCGTTCCTCATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFPRGNS*PFLILP
Trigger: TGGCAGAATGAGGAACGGGCAGCTATTTCCTCGGGG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGATGTCCTGCCACCGTaGATAGCCATGGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGDVLPP*IAMEDN
Trigger: ATTGTCCTCCATGGCTATGCACGGTGGCAGGACATC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTGGTTCAGAACCTTGTaGAGGACGGCGTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIWFRTL*RTALAG
Trigger: GCCGGCCAACGCCGTCCTGCACAAGGTTCTGAACCA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGTACTTGGAAGACCCTaGCAGCCATCTCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPVLGRP*QPSPTQ
Trigger: CTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTAC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGTACTTGGAAGACCCTaGCAGCCATCTCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEVLGRP*QPSPTQ
Trigger: CTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTAC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATTCCTCCCTCATAACTaGTCCACCCTCCACGTGGGG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEFLPHN*STLHVG
Trigger: CCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACATTCCCAACACAAGATaGCGGTACACAGGAGGTAAC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHIPNTR*RYTGGN
Trigger: GTTACCTCCTGTGTACCGGCATCTTGTGTTGGGAAT...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCACATTTCCCTAGCCTaGCCTCCACTATTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSHISLA*PPLFCS
Trigger: AGAGCAAAATAGTGGAGGGCAGGCTAGGGAAATGTG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCCATCTTCTGCTCTCTTaGCCAAATCCCCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTHLLLS*PNPLFP
Trigger: GGGAAACAGGGGATTTGGGCAAGAGAGCAGAAGATG...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTTCTCCCTGCTCCCTTTaGGAACTAGGGGGCCATACC +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPSPCSL*ELGGHT
Trigger: GGTATGGCCCCCTAGTTCCCAAAGGGAGCAGGGAGA...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR CCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGATCTCCTTCTGCTTCTTaGGTCCTCGTTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGSPSAS*VLVFSS
Trigger: AGAAGAGAAAACGAGGACCCAAGAAGCAGAAGGAGA...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGGCTCTTCGGATGGGTaGGGGCTGGATATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIGSSDG*GLDISS
Trigger: GCTGCTGATATCCAGCCCCCACCCATCCGAAGAGCC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTTTTGGCTCTTCGGATaGGTGGGGGCTGGATATCAG +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSFWLFG*VGAGYQ
Trigger: CTGATATCCAGCCCCCACCCATCCGAAGAGCCAAAA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCCGCCTCTTATGGCCTaGACCTTTGCCCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIPPLMA*TFALFG
Trigger: ACCAAAGAGGGCAAAGGTCCAGGCCATAAGAGGCGG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCCGCCTCTTATGGCCTaGACCTTTGCCCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFPPLMA*TFALFG
Trigger: ACCAAAGAGGGCAAAGGTCCAGGCCATAAGAGGCGG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTGGTTGATGATGCGGTaGACGGTCATCCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFWLMMR*TVIHSG
Trigger: GCCAGAGTGGATGACCGTCCACCGCATCATCAACCA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATCCTCCCACGTGGACTaGTCATATGGTAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGSSHVD*SYGKSL
Trigger: GAGGGACTTACCATATGACCAGTCCACGTGGGAGGA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCATCTTCCTCCCACGTaGACTGGTCATATGGTAAGT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSHLPPT*TGHMVS
Trigger: ACTTACCATATGACCAGTCCACGTGGGAGGAAGATG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGATGTCAGGAGAACATaGAACTTCACCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELDVRRT*NFTCAS
Trigger: GGAGGCACAGGTGAAGTTCCATGTTCTCCTGACATC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGATTATTCTGCAATaGGGTTCCTGTCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTQIILQ*GSCQQQ
Trigger: TTGCTGCTGACAGGAACCCCATTGCAGAATAATCTG...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACAGATTATTCTGCAATaGGGTTCCTGTCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGQIILQ*GSCQQQ
Trigger: TTGCTGCTGACAGGAACCCCATTGCAGAATAATCTG...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGAGCTCTGTCTTGGCTaGCATGTTCTTAAAGACATC +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTELCLG*HVLKDI
Trigger: GATGTCTTTAAGAACATGCCAGCCAAGACAGAGCTC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTGCCCGGCTAAAGGCCTaGATGTCATTATGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIARLKA*MSLWGF
Trigger: GAACCCCCATAATGACATCCAGGCCTTTAGCCGGGC...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTTTCTCACTTGGAGCTaGAGTAGCAGGTTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTFLTWS*SSRFRG
Trigger: ACCTCTAAACCTGCTACTCCAGCTCCAAGTGAGAAA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTTCTCCTTTCTCACTTaGAGCTGGAGTAGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTFSFLT*SWSSRF
Trigger: AAACCTGCTACTCCAGCTCCAAGTGAGAAAGGAGAA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAACTGGCGTCGACTCTGTaGCTGACTTCTCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEELASTL*LTSLCP
Trigger: GGGACAGAGAGAAGTCAGCCACAGAGTCGACGCCAG...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCACAGTCTTCAAGGCTTaGTGGGAAAGGTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELTVFKA*WERCVG
Trigger: TCCCACACACCTTTCCCACCAAGCCTTGAAGACTGT...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGTATACTTGGCAGTGTaGGAGGAAGGTACTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPVYLAV*EEGTWK
Trigger: CTTCCAAGTACCTTCCTCCCACACTGCCAAGTATAC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGAAGTTGTGTATACTTaGCAGTGTGGGAGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTEVVYT*QCGRKV
Trigger: TACCTTCCTCCCACACTGCCAAGTATACACAACTTC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTCCACTATTTTGCTCTaGTCCCAACGACAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHSTILL*SQRQGS
Trigger: GCTACCTTGTCGTTGGGACCAGAGCAAAATAGTGGA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
3UTR CAA 72 bp AGTGAACGGCACCTTTATTCTGAGGCTGAACAGCAGTaGACTTCCTCCCTCATAACTGCTCCACCCTCCACG +
Preference number: 4 (lower is better)
Translates to: SERHLYSEAEQQ*TSSLITAPPST
Trigger: CGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAACTGCTGTTCAGCCTCAGAATAAAGGTGCCGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTTGTTCCAGATATCCTaGCCCATTCATCTATACGCA +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTLFQIS*PIHLYA
Trigger: TGCGTATAGATGAATGGGTCAGGATATCTGGAACAA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR TCA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGATTGTTCCAGATATCCTaGCCCATTCATCTATACGCA +
Preference number: 4 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGLFQIS*PIHLYA
Trigger: TGCGTATAGATGAATGGGTCAGGATATCTGGAACAA...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR TCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGTGATAAACCGTGGCTaGGTCTCATATTTCACGGTA +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSVINRG*VSYFTV
Trigger: TACCGTGAAATATGAGACTCAGCCACGGTTTATCAC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGTGATAAACCGTGGCTaGGTCTCATATTTCACGGTA +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPVINRG*VSYFTV
Trigger: TACCGTGAAATATGAGACTCAGCCACGGTTTATCAC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACTTTCTTGCCCCCTTTaGTGGCATTGTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGLSCPL*WHCPQR
Trigger: CCTTTGAGGACAATGCCATCAAAGGGGGCAAGAAAG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTCATCTGCGAGAAGATaGGCACTCGGTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTISSARR*ALGVLA
Trigger: AGCAAGGACACCGAGTGCTCATCTTCTCGCAGATGA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTCCGCTGACGGGTGTTaGAGCCCAGCACCTCAATGT +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLISADGC*SPAPQC
Trigger: ACATTGAGGTGCTGGGCTTCAACACCCGTCAGCGGA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAAGCGCATCACAGCATTaGGGAAAGCCTTCCGCTGAC +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEESASQH*GKPSAD
Trigger: GTCAGCGGAAGGCTTTCCTCAATGCTGTGATGCGCT...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTTGACCAACGCCCATTaGTGTGCTCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSLTNAH*CAQTPA
Trigger: TGCAGGAGTTTGAGCACATCAATGGGCGTTGGTCAA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCATCAGTTCCGGCATTaGCCAACGCCCATTGATGTG +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIHQFRH*PTPIDV
Trigger: CACATCAATGGGCGTTGGTCAATGCCGGAACTGATG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CCAGGTTCAGGCTCCATCTCTCCAGGCACCCCTGGCACCTCATCCTCTAGAGGATTGATAATGGCAAATTaGGCATCATTCTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: PGSGSISPGTPGTSSSRGLIMAN*ASFWMS
Trigger: GGACATCCAGAATGATGCTCAATTTGCCATTATCAA...TCCTCTAGAGGATGAGGTGCCAGGGGTGCCTGGAGAGATGGAGCCTGAACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR TCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCACATGAGACAGAGCTaGTTCTGCAGGGAAACGGCT +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIHMRQS*FCRETA
Trigger: AGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCACATGAGACAGAGCTaGTTCTGCAGGGAAACGGCT +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFHMRQS*FCRETA
Trigger: AGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCAGCTCCTCTTTGGCTTaGGGGAGTATCACCCAACCA +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFSSSLA*GSITQP
Trigger: TGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTAGCTCCTCTTTGGCTTaGGGGAGTATCACCCAACCA +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTISSSLA*GSITQP
Trigger: TGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTCTGTATCCAGGCCTTaGGGAGGGAGGGTAGTAGAA +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFSVSRP*GGRVVE
Trigger: TTCTACTACCCTCCCTCCTCAAGGCCTGGATACAGA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGACCAGGAGTGGGTGTaGAGAGAGACTGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIDQEWV*RETGKG
Trigger: CCCTTTCCCAGTCTCTCTTCACACCCACTCCTGGTC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTGTTCCACTTGCTTTTaGCCCCCATCTCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLICSTCF*PPSPSP
Trigger: GGGGGAGGGAGATGGGGGGCAAAAGCAAGTGGAACA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTCAGCACGGGGCATGTaGATCGGGGACACAGCCATT +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLISARGM*IGDTAI
Trigger: AATGGCTGTGTCCCCGATGCACATGCCCCGTGCTGA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTCTTCTTCTTATACTTaGGGGGCTGGGCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSSSSYT*GAGQGL
Trigger: AAGACCCTGCCCAGCCCCGCAAGTATAAGAAGAAGA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCACATAGAATTTGGGTaGCCACATCTGGAACTCCCG +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSHIEFG*PHLELP
Trigger: CGGGAGTTCCAGATGTGGGCACCCAAATTCTATGTG...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACACATAGAATTTGGGTaGCCACATCTGGAACTCCCG +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGHIEFG*PHLELP
Trigger: CGGGAGTTCCAGATGTGGGCACCCAAATTCTATGTG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGATGGAACTTCACCTGTaGCTCCCTCTTCATCTTAAA +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMMELHL*LPLHLK
Trigger: TTTAAGATGAAGAGGGAGGCACAGGTGAAGTTCCAT...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTGCGGATGGAACCAAGTaGTGCCTGATCAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSADGTK*CLINGD
Trigger: ATCACCATTGATCAGGCAGCACTTGGTTCCATCCGC...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTCCTCCAGATTATTCTaGAATGGGGTTCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTSSRLF*NGVPVS
Trigger: GCTGACAGGAACCCCATTGCAGAATAATCTGGAGGA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGTTCTTAAAGACATCTaGCTTGAGTCTCCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPVLKDI*LESPQH
Trigger: ATGCTGCGGAGACTCAAGGCAGATGTCTTTAAGAAC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAAGCACTCGGTGTCCTTaGTCCTTCAGCTTTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEESTRCP*SFSFRS
Trigger: GCTGCGAAAGCTGAAGGAGCAAGGACACCGAGTGCT...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGTACTCATTCATGTTCTaGACGTCAGTGTCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMYSFMF*TSVSSV
Trigger: AACTGAGGACACTGACGTGCAGAACATGAATGAGTA...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGGTTTCAGAGCCGTCTaGCCCAGGCTCACACAGATG +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIGFRAV*PRLTQM
Trigger: CATCTGTGTGAGCCTGGGGCAGACGGCTCTGAAACC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTGGCACCTCATCCTCTAGAGGAATCTTCCTTGGCTCCAGCCGCTCCCCAAGTGATGTGCTCAAACTCCTaGACCTTCTTTTTGACGAGA +
Preference number: 4 (lower is better)
Translates to: LAPHPLEESSLAPAAPQVMCSNS*TFFLTR
Trigger: TCTCGTCAAAAAGAAGGTGCAGGAGTTTGAGCACAT...CACTTGGGGAGCGGCTGGAGCCAAGGAAGATTCCTCTAGAGGATGAGGTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR GCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTCCCCGAGGAAATAGCTaGCCGTTCCTCATTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPPRGNS*PFLILP
Trigger: TGGCAGAATGAGGAACGGGCAGCTATTTCCTCGGGG...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCGATGTCCTGCCACCGTaGATAGCCATGGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFDVLPP*IAMEDN
Trigger: ATTGTCCTCCATGGCTATGCACGGTGGCAGGACATC...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTGCCCTCCACTATTTTaGTCTGGTCCCAACGACAAG +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSCPPLF*SGPNDK
Trigger: CTTGTCGTTGGGACCAGAGCAAAATAGTGGAGGGCA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGCAGCTTCGTGGCTCTaGATACATTTTCTGGACATT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSAASWL*IHFLDI
Trigger: AATGTCCAGAAAATGTATGCAGAGCCACGAAGCTGC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCACCTTTTACATCTTCTaGTCTCTTGCCCAAATCCCC +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSTFYIF*SLAQIP
Trigger: GGGGATTTGGGCAAGAGAGCAGAAGATGTAAAAGGT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCACCCCAACACAGTCCTaGAGGAAAAGAAATCCTCAG +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELTPTQS*RKRNPQ
Trigger: CTGAGGATTTCTTTTCCTCCAGGACTGTGTTGGGGT...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACTCTCTTTAGTTTCTTaGTGCGGACAGGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGLSLVS*CGQGHQ
Trigger: CTGATGGCCCTGTCCGCACCAAGAAACTAAAGAGAG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCTCTCTTTAGTTTCTTaGTGCGGACAGGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSLSLVS*CGQGHQ
Trigger: CTGATGGCCCTGTCCGCACCAAGAAACTAAAGAGAG...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTACAGCCATTCACCATTaGGAATGTCAGGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTITAIHH*ECQAGE
Trigger: CTCCCCTGCCTGACATTCCCAATGGTGAATGGCTGT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCAGTAGAGGAAGACGATaGTTTGTATGGTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTSRGRR*FVWSCL
Trigger: TAGGCAAGACCATACAAACCATCGTCTTCCTCTACT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCTCACCACATAGAATTTaGGTGCCCACATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSSPHRI*VPTSGT
Trigger: AGTTCCAGATGTGGGCACCCAAATTCTATGTGGTGA...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAAAATCATCACTTTGTTaGCCTGGCCAATCCGATGAG +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPKSSLC*PGQSDE
Trigger: CTCATCGGATTGGCCAGGCCAACAAAGTGATGATTT...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTTCCTCAGTTGCATCCTaGTTCCGGTCCAACAGCCGA +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPSSVAS*FRSNSR
Trigger: TCGGCTGTTGGACCGGAACCAGGATGCAACTGAGGA...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCAGGCTCACACAGATaGCGCATGAACAAAGACACA +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSPGSHR*RMNKDT
Trigger: TGTGTCTTTGTTCATGCGCCATCTGTGTGAGCCTGG...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACCAGGCTCACACAGATaGCGCATGAACAAAGACACA +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGPGSHR*RMNKDT
Trigger: TGTGTCTTTGTTCATGCGCCATCTGTGTGAGCCTGG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTTTCTCACTTGGAGCTaGAGTAGCAGGTTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHFLTWS*SSRFRG
Trigger: ACCTCTAAACCTGCTACTCCAGCTCCAAGTGAGAAA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCGTCCCTAGAACAGGTTaGGGAGCTCCTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFVPRTG*GAPLWL
Trigger: AAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGAC...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACTGCCTGATCAATGGTaGTCAGCTCATACGATGTCA +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGLPDQW*SAHTMS
Trigger: TGACATCGTATGAGCTGATCACCATTGATCAGGCAG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATCATCTGCGAGAAGATaGGCACTCGGTGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEESSARR*ALGVLA
Trigger: AGCAAGGACACCGAGTGCTCATCTTCTCGCAGATGA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATCTTGGCCACTTGTGTaGTTCGCTCTTCCACTGACG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEESWPLV*FALPLT
Trigger: CGTCAGTGGAAGAGCGAATCACACAAGTGGCCAAGA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAACATCAGTTCCGGCATTaGCCAACGCCCATTGATGTG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEHQFRH*PTPIDV
Trigger: CACATCAATGGGCGTTGGTCAATGCCGGAACTGATG...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGTGTGTGAAGCTCTGTaGAGCCACCATCGGCGATAT +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPVCEAL*SHHRRY
Trigger: ATATCGCCGATGGTGGCTTCACAGAGCTTCACACAC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATTCTGCCACAGTGTGTaGAGCTCTGTGAAGCCACCA +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEFCHSV*SSVKPP
Trigger: TGGTGGCTTCACAGAGCTTCACACACTGTGGCAGAA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTTCTCCACTTCCACATaGGACAGAGCTGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSFSTST*DRADSA
Trigger: TGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAACAGGATCACAGTGTCTaGCGCCTTCATCACACAGGA +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEQDHSV*RLHHTG
Trigger: TCCTGTGTGATGAAGGCGGCAGACACTGTGATCCTG...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTGTGGTAGGAGGAGATaGACGCGTCACAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLICGRRR*TRHSTG
Trigger: TCCTGTGCTGTGACGCGTGCATCTCCTCCTACCACA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTCTTCTTCTTATACTTaGGGGGCTGGGCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTISSSYT*GAGQGL
Trigger: AAGACCCTGCCCAGCCCCGCAAGTATAAGAAGAAGA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAATGGAACTTCACCTGTaGCTCCCTCTTCATCTTAAA +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPMELHL*LPLHLK
Trigger: TTTAAGATGAAGAGGGAGGCACAGGTGAAGTTCCAT...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCGTTCTTAAAGACATCTaGCTTGAGTCTCCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTVLKDI*LESPQH
Trigger: ATGCTGCGGAGACTCAAGGCAGATGTCTTTAAGAAC...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTAGCACTCGGTGTCCTTaGTCCTTCAGCTTTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLISTRCP*SFSFRS
Trigger: GCTGCGAAAGCTGAAGGAGCAAGGACACCGAGTGCT...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTATGTCGTCAAGCTCCTaGTTGGACATGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIMSSSS*LDMEPA
Trigger: GGCAGGCTCCATGTCCAAGCAGGAGCTTGACGACAT...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCACATAATGAATCACACTaGTGTCCTCCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPHNESH*CPPPCS
Trigger: AGAACAAGGAGGAGGACAGCAGTGTGATTCATTATG...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGTCAGTGTCCTCAGTTaGATCCTGGTTCCGGTCCAA +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPVSVLS*ILVPVQ
Trigger: TTGGACCGGAACCAGGATGCAACTGAGGACACTGAC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATACTCATTCATGTTCTaGACGTCAGTGTCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPYSFMF*TSVSSV
Trigger: AACTGAGGACACTGACGTGCAGAACATGAATGAGTA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTTCTCATTCCGGAGCTaGCTCTTTGACTGTCTACGC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFFSFRS*LFDCLR
Trigger: GCGTAGACAGTCAAAGAGGCAGCTCCGGAATGAGAA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCATGTGCTCAAACTCCTaGACCTTCTTTTTGACGAGA +
Preference number: 4 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSMCSNS*TFFLTR
Trigger: TCTCGTCAAAAAGAAGGTGCAGGAGTTTGAGCACAT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCAACGCCCATTGATGTaGTCAAACTCCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIQRPLM*SNSCTF
Trigger: GAAGGTGCAGGAGTTTGAGCACATCAATGGGCGTTG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCCAAGAGGTGTCCTTATaGCTTCTCCTTTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELQEVSL*LLLSHL
Trigger: CAAGTGAGAAAGGAGAAGGCATAAGGACACCTCTTG...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTCTCCTTCTGCTTCTTaGGTCCTCGTTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELSPSAS*VLVFSS
Trigger: AGAAGAGAAAACGAGGACCCAAGAAGCAGAAGGAGA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATTTTGGCTCTTCGGATaGGTGGGGGCTGGATATCAG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEFWLFG*VGAGYQ
Trigger: CTGATATCCAGCCCCCACCCATCCGAAGAGCCAAAA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAAGTAGAGGAAGACGATaGTTTGTATGGTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPSRGRR*FVWSCL
Trigger: TAGGCAAGACCATACAAACCATCGTCTTCCTCTACT...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTCCTCAGTTGCATCCTaGTTCCGGTCCAACAGCCGA +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLISSVAS*FRSNSR
Trigger: TCGGCTGTTGGACCGGAACCAGGATGCAACTGAGGA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTTTCTCACTTGGAGCTaGAGTAGCAGGTTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTFLTWS*SSRFRG
Trigger: ACCTCTAAACCTGCTACTCCAGCTCCAAGTGAGAAA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTTTCTCACTTGGAGCTaGAGTAGCAGGTTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELFLTWS*SSRFRG
Trigger: ACCTCTAAACCTGCTACTCCAGCTCCAAGTGAGAAA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGTCTTCAAGGCTTGGTaGGAAAGGTGTGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEVFKAW*ERCVGV
Trigger: CACTCCCACACACCTTTCCCACCAAGCCTTGAAGAC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGTCCCTAGAACAGGTTaGGGAGCTCCTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPVPRTG*GAPLWL
Trigger: AAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGAC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGGCTTCCACCACATCTaGCCCATTGTATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPGFHHI*PIVFSP
Trigger: GGGAGAGAATACAATGGGCCAGATGTGGTGGAAGCC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGTCTGCATACATTTTCTaGACATTGCGCATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMSAYIF*TLRMFH
Trigger: ATGGAACATGCGCAATGTCCAGAAAATGTATGCAGA...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CAA 72 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTaGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVY*AVWEEGTWKTL
Trigger: CAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTACCCACCGAGTACTCTaGCTGGTTGTCTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLITHRVL*LVVLVF
Trigger: GAAGACCAAGACAACCAGTCAGAGTACTCGGTGGGT...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTTCTGCCACAGTGTGTaGAGCTCTGTGAAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIFCHSV*SSVKPP
Trigger: TGGTGGCTTCACAGAGCTTCACACACTGTGGCAGAA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTTCTCCACTTCCACATaGGACAGAGCTGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIFSTST*DRADSA
Trigger: TGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTCTGTATCCAGGCCTTaGGGAGGGAGGGTAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLISVSRP*GGRVVE
Trigger: TTCTACTACCCTCCCTCCTCAAGGCCTGGATACAGA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCACCTTTTACATCTTCTaGCTTCTCTCTGTCCCCACG +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFTFYIF*LLSVPT
Trigger: CGTGGGGACAGAGAGAAGTCAGAAGATGTAAAAGGT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358181.8
CDS-3UTR TCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGGGCAACAGAATGAATaGACACTGGGGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIGQQNE*TLGVSF
Trigger: GAAGGAGACCCCCAGTGTTCATTCATTCTGTTGCCC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR TCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGCCTACGTTTCTCTCTaGAGTCCAGTCTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEAYVSL*SPVSPC
Trigger: ACAAGGTGAGACTGGACTTCAGAGAGAAACGTAGGC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAACAATGTAGGATCTTCTaGACTCGACCCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEQCRIF*TRPFST
Trigger: CGTGCTGAAGGGTCGAGTGCAGAAGATCCTACATTG...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTCAATGTAGGATCTTCTaGACTCGACCCTTCAGCACG +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPQCRIF*TRPFST
Trigger: CGTGCTGAAGGGTCGAGTGCAGAAGATCCTACATTG...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAACACATAGAATTTGGGTaGCCACATCTGGAACTCCCG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEHIEFG*PHLELP
Trigger: CGGGAGTTCCAGATGTGGGCACCCAAATTCTATGTG...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCGGATGGAACCAAGTaGTGCCTGATCAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPADGTK*CLINGD
Trigger: ATCACCATTGATCAGGCAGCACTTGGTTCCATCCGC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTCCTCCAGATTATTCTaGAATGGGGTTCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTISSRLF*NGVPVS
Trigger: GCTGACAGGAACCCCATTGCAGAATAATCTGGAGGA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTAGACGACTTAATAAGTaGCCCACCCTCATAAGCCCC +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPRRLNK*PTLISP
Trigger: GGGGCTTATGAGGGTGGGGCACTTATTAAGTCGTCT...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCCATAATGAATCACACTaGTGTCCTCCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELHNESH*CPPPCS
Trigger: AGAACAAGGAGGAGGACAGCAGTGTGATTCATTATG...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGTCAGTGTCCTCAGTTaGATCCTGGTTCCGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIVSVLS*ILVPVQ
Trigger: TTGGACCGGAACCAGGATGCAACTGAGGACACTGAC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTCCACATTCTCCTCCTaGTTGATGATCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFSTFSS*LMISRS
Trigger: TGAGCGAGAGATCATCAAGCAGGAGGAGAATGTGGA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCAAGAGGTGTCCTTATaGCTTCTCCTTTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSQEVSL*LLLSHL
Trigger: CAAGTGAGAAAGGAGAAGGCATAAGGACACCTCTTG...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTCAAGAGGTGTCCTTATaGCTTCTCCTTTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLQEVSL*LLLSHL
Trigger: CAAGTGAGAAAGGAGAAGGCATAAGGACACCTCTTG...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR GCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATTACATCTTCTCTCTTaGCCAAATCCCCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGLHLLS*PNPLFP
Trigger: GGGAAACAGGGGATTTGGGCAAGAGAGAAGATGTAA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000380358.9
CDS-3UTR GCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCATTCCCAACACAAGATaGCGGTACACAGGAGGTAAC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFIPNTR*RYTGGN
Trigger: GTTACCTCCTGTGTACCGGCATCTTGTGTTGGGAAT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCACATTTCCCTAGCCTaGCCTCCACTATTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIHISLA*PPLFCS
Trigger: AGAGCAAAATAGTGGAGGGCAGGCTAGGGAAATGTG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCACATCTATACGCAGTATaGGAGACCCAAACAAAGATA +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPHLYAV*ETQTKI
Trigger: TATCTTTGTTTGGGTCTCCCATACTGCGTATAGATG...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330494.12
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATTTTTATCCACACTGTaGTTGATGATGCGGTGGACG +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGFLSTL*LMMRWT
Trigger: CGTCCACCGCATCATCAACCACAGTGTGGATAAAAA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCAGACGATGGTTTGTATaGTCTTGCCTAGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFRRWFV*SCLAPS
Trigger: AGATGGGGCTAGGCAAGACCATACAAACCATCGTCT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTAGACGATGGTTTGTATaGTCTTGCCTAGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIRRWFV*SCLAPS
Trigger: AGATGGGGCTAGGCAAGACCATACAAACCATCGTCT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTCACCACATAGAATTTaGGTGCCCACATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSSPHRI*VPTSGT
Trigger: AGTTCCAGATGTGGGCACCCAAATTCTATGTGGTGA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGATGTCAGGAGAACATaGAACTTCACCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPDVRRT*NFTCAS
Trigger: GGAGGCACAGGTGAAGTTCCATGTTCTCCTGACATC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGTTGTTAAATCTCTCTaGGGTGAGGAAGTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGVVKSL*GEEVQE
Trigger: CTCCTGAACTTCCTCACCCCAGAGAGATTTAACAAC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTAGGAAGCAGAATTGTTaGGCCCCAGGAGCATTAAAC +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIRKQNC*APGALN
Trigger: GTTTAATGCTCCTGGGGCCCAACAATTCTGCTTCCT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTAAATCATCACTTTGTTaGCCTGGCCAATCCGATGAG +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSKSSLC*PGQSDE
Trigger: CTCATCGGATTGGCCAGGCCAACAAAGTGATGATTT...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCCAACAGCCGAGCGATaGCCTCATTGTCATAATGAA +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIPTAER*PHCHNE
Trigger: TTCATTATGACAATGAGGCCATCGCTCGGCTGTTGG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCCAACAGCCGAGCGATaGCCTCATTGTCATAATGAA +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFPTAER*PHCHNE
Trigger: TTCATTATGACAATGAGGCCATCGCTCGGCTGTTGG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTTCTCCTTTCTCACTTaGAGCTGGAGTAGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSFSFLT*SWSSRF
Trigger: AAACCTGCTACTCCAGCTCCAAGTGAGAAAGGAGAA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGGCTTCAGTTTTAAATaGCTCGTTGATAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTGFSFK*LVDNGK
Trigger: TTTGCCATTATCAACGAGCCATTTAAAACTGAAGCC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAACAGTCTTCAAGGCTTaGTGGGAAAGGTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEETVFKA*WERCVG
Trigger: TCCCACACACCTTTCCCACCAAGCCTTGAAGACTGT...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTGAAGTTGTGTATACTTaGCAGTGTGGGAGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLEVVYT*QCGRKV
Trigger: TACCTTCCTCCCACACTGCCAAGTATACACAACTTC...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCAGAATGAATGAACACTaGGGGTCTCCTTCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTRMNEH*GSPSLL
Trigger: TAGCAAAGAAGGAGACCCCCAGTGTTCATTCATTCT...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
3UTR CAA 72 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTaGAGGGAGTATCACCCAACCATTACTCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFG*REYHPTITLFV
Trigger: TACAAAAAGAGTAATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTTTCTTGCCCCCTTTaGTGGCATTGTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLILSCPL*WHCPQR
Trigger: CCTTTGAGGACAATGCCATCAAAGGGGGCAAGAAAG...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR TCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCACACAGATGGCGCATaGACAAAGACACATAGGCCT +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIHTDGA*TKTHRP
Trigger: AGGCCTATGTGTCTTTGTTCATGCGCCATCTGTGTG...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTTGATAATGGCAAATTaGGCATCATTCTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SLEQVGELLFGLREYHPTLIMAN*ASFWMS
Trigger: GGACATCCAGAATGATGCTCAATTTGCCATTATCAA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTGTCATTTTTACTTCTTaGCCACAGGATCACAGTGTC +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSVIFTS*PQDHSV
Trigger: GACACTGTGATCCTGTGGGCAAGAAGTAAAAATGAC...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTATGGCCTGGACCTTTaGCCTCTTTGGTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIYGLDL*PLWFWL
Trigger: GAGCCAAAACCAAAGAGGGCAAAGGTCCAGGCCATA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGATGGAACCAAGTGCTaGCTGATCAATGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPDGTKC*LINGDQ
Trigger: CTGATCACCATTGATCAGGCAGCACTTGGTTCCATC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTTCCACATTCTCCTCCTaGTTGATGATCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPSTFSS*LMISRS
Trigger: TGAGCGAGAGATCATCAAGCAGGAGGAGAATGTGGA...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTTCTCATTCCGGAGCTaGCTCTTTGACTGTCTACGC +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIFSFRS*LFDCLR
Trigger: GCGTAGACAGTCAAAGAGGCAGCTCCGGAATGAGAA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTATTGCGCATGTTCCATaGCATCTCTTACCTGCAATG +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIIAHVP*HLLPAM
Trigger: CATTGCAGGTAAGAGATGGCATGGAACATGCGCAAT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR GCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAACATTTTCTGGACATTaGGCATGTTCCATGCCATCT +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGTFSGH*ACSMPS
Trigger: AGATGGCATGGAACATGCGCAATGTCCAGAAAATGT...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTTTTTATCCACACTGTaGTTGATGATGCGGTGGACG +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFFLSTL*LMMRWT
Trigger: CGTCCACCGCATCATCAACCACAGTGTGGATAAAAA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTCATCTTCCTCCCACGTaGACTGGTCATATGGTAAGT +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPHLPPT*TGHMVS
Trigger: ACTTACCATATGACCAGTCCACGTGGGAGGAAGATG...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCAGATTATTCTGCAATaGGGTTCCTGTCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIQIILQ*GSCQQQ
Trigger: TTGCTGCTGACAGGAACCCCATTGCAGAATAATCTG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTGAGCTCTGTCTTGGCTaGCATGTTCTTAAAGACATC +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIELCLG*HVLKDI
Trigger: GATGTCTTTAAGAACATGCCAGCCAAGACAGAGCTC...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAAGGAAGCAGAATTGTTaGGCCCCAGGAGCATTAAAC +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEERKQNC*APGALN
Trigger: GTTTAATGCTCCTGGGGCCCAACAATTCTGCTTCCT...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTTCTCCTTTCTCACTTaGAGCTGGAGTAGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFFSFLT*SWSSRF
Trigger: AAACCTGCTACTCCAGCTCCAAGTGAGAAAGGAGAA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGGCTTCAGTTTTAAATaGCTCGTTGATAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: GSLEQVGELLFGLREYHPGFSFK*LVDNGK
Trigger: TTTGCCATTATCAACGAGCCATTTAAAACTGAAGCC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGTATACTTGGCAGTGTaGGAGGAAGGTACTTGGAAG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEVYLAV*EEGTWK
Trigger: CTTCCAAGTACCTTCCTCCCACACTGCCAAGTATAC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTTCCACTATTTTGCTCTaGTCCCAACGACAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPSTILL*SQRQGS
Trigger: GCTACCTTGTCGTTGGGACCAGAGCAAAATAGTGGA...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTTGATAATGGCAAATTaGGCATCATTCTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSLIMAN*ASFWMS
Trigger: GGACATCCAGAATGATGCTCAATTTGCCATTATCAA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGATGGAACCAAGTGCTaGCTGATCAATGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIDGTKC*LINGDQ
Trigger: CTGATCACCATTGATCAGGCAGCACTTGGTTCCATC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGTTCTTAAAGACATCTaGCTTGAGTCTCCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEVLKDI*LESPQH
Trigger: ATGCTGCGGAGACTCAAGGCAGATGTCTTTAAGAAC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTATGTGCTCAAACTCCTaGACCTTCTTTTTGACGAGA +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTIMCSNS*TFFLTR
Trigger: TCTCGTCAAAAAGAAGGTGCAGGAGTTTGAGCACAT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCACATTTCCCTAGCCTaGCCTCCACTATTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIHISLA*PPLFCS
Trigger: AGAGCAAAATAGTGGAGGGCAGGCTAGGGAAATGTG...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTTCTCCTTCTGCTTCTTaGGTCCTCGTTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPSPSAS*VLVFSS
Trigger: AGAAGAGAAAACGAGGACCCAAGAAGCAGAAGGAGA...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATTTTTATCCACACTGTaGTTGATGATGCGGTGGACG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEFLSTL*LMMRWT
Trigger: CGTCCACCGCATCATCAACCACAGTGTGGATAAAAA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCATCTTCCTCCCACGTaGACTGGTCATATGGTAAGT +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIHLPPT*TGHMVS
Trigger: ACTTACCATATGACCAGTCCACGTGGGAGGAAGATG...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGTTGTTAAATCTCTCTaGGGTGAGGAAGTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEVVKSL*GEEVQE
Trigger: CTCCTGAACTTCCTCACCCCAGAGAGATTTAACAAC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTGCAGTTTCTTGATCTaGTCCTCTTTGGATATGTCA +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSCSFLI*SSLDMS
Trigger: TGACATATCCAAAGAGGACCAGATCAAGAAACTGCA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATGCAGTTTCTTGATCTaGTCCTCTTTGGATATGTCA +
Preference number: 4 (lower is better)
Translates to: DSPLPHETELILQGNGWGCSFLI*SSLDMS
Trigger: TGACATATCCAAAGAGGACCAGATCAAGAAACTGCA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGAGCTCTGTCTTGGCTaGCATGTTCTTAAAGACATC +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPELCLG*HVLKDI
Trigger: GATGTCTTTAAGAACATGCCAGCCAAGACAGAGCTC...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTAAATCATCACTTTGTTaGCCTGGCCAATCCGATGAG +
Preference number: 4 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPKSSLC*PGQSDE
Trigger: CTCATCGGATTGGCCAGGCCAACAAAGTGATGATTT...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATTCTCCTTTCTCACTTaGAGCTGGAGTAGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEFSFLT*SWSSRF
Trigger: AAACCTGCTACTCCAGCTCCAAGTGAGAAAGGAGAA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGAAGTTGTGTATACTTaGCAGTGTGGGAGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEEVVYT*QCGRKV
Trigger: TACCTTCCTCCCACACTGCCAAGTATACACAACTTC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR TCA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTTGATAATGGCAAATTaGGCATCATTCTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: ALFPTKVPKGQARLILHFLIMAN*ASFWMS
Trigger: GGACATCCAGAATGATGCTCAATTTGCCATTATCAA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGTCATTTTTACTTCTTaGCCACAGGATCACAGTGTC +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEVIFTS*PQDHSV
Trigger: GACACTGTGATCCTGTGGGCAAGAAGTAAAAATGAC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAATGGAACTTCACCTGTaGCTCCCTCTTCATCTTAAA +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEMELHL*LPLHLK
Trigger: TTTAAGATGAAGAGGGAGGCACAGGTGAAGTTCCAT...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR GCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAACATAATGAATCACACTaGTGTCCTCCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEHNESH*CPPPCS
Trigger: AGAACAAGGAGGAGGACAGCAGTGTGATTCATTATG...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAAGTAGAGGAAGACGATaGTTTGTATGGTCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEESRGRR*FVWSCL
Trigger: TAGGCAAGACCATACAAACCATCGTCTTCCTCTACT...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTCACCACATAGAATTTaGGTGCCCACATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLISPHRI*VPTSGT
Trigger: AGTTCCAGATGTGGGCACCCAAATTCTATGTGGTGA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGTTGTTAAATCTCTCTaGGGTGAGGAAGTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIVVKSL*GEEVQE
Trigger: CTCCTGAACTTCCTCACCCCAGAGAGATTTAACAAC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTGCAGTTTCTTGATCTaGTCCTCTTTGGATATGTCA +
Preference number: 4 (lower is better)
Translates to: LEQVGELLFGLREYHPTICSFLI*SSLDMS
Trigger: TGACATATCCAAAGAGGACCAGATCAAGAAACTGCA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CCA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTGGCTTCAGTTTTAAATaGCTCGTTGATAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSGFSFK*LVDNGK
Trigger: TTTGCCATTATCAACGAGCCATTTAAAACTGAAGCC...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGAAGTTGTGTATACTTaGCAGTGTGGGAGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIEVVYT*QCGRKV
Trigger: TACCTTCCTCCCACACTGCCAAGTATACACAACTTC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR GCA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTATGTGCTCAAACTCCTaGACCTTCTTTTTGACGAGA +
Preference number: 4 (lower is better)
Translates to: LFKALFPTKVPKGQARLIMCSNS*TFFLTR
Trigger: TCTCGTCAAAAAGAAGGTGCAGGAGTTTGAGCACAT...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACACGGCGTTGGCCGGCTaGTTCCCCGCCAGCGACTCC +
Preference number: 5 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDTALAG*FPASDS
Trigger: GGAGTCGCTGGCGGGGAACAAGCCGGCCAACGCCGT...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACAGCAGGCCCCAGCGCTaGAGCTGGGGGTCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHSRPQR*SWGSAS
Trigger: CGAGGCCGACCCCCAGCTCAAGCGCTGGGGCCTGCT...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCCCAGCACCTCAATGTaGCCCCCGACTCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTPSTSM*PPTRAS
Trigger: GCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGG...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACCCAGCACCTCAATGTaGCCCCCGACTCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGPSTSM*PPTRAS
Trigger: GCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGG...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGCCTGCTCCAGGAGCTaGAACCTCCGGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDACSRS*NLRARN
Trigger: GTTCCTGGCCCGGAGGTTCAAGCTCCTGGAGCAGGC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGAGCTCCCCGCCGTCCTaGCATACGCGGCAGTACTCC +
Preference number: 5 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMSSPPS*HTRQYS
Trigger: GGAGTACTGCCGCGTATGCAAGGACGGCGGGGAGCT...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCAGCTCCCCGCCGTCCTaGCATACGCGGCAGTACTCC +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTSSPPS*HTRQYS
Trigger: GGAGTACTGCCGCGTATGCAAGGACGGCGGGGAGCT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ACGGGTGTTGAAGCCCAGCACCTCAATGTTGCCCCCGACTCGGGCCAGCAGTGGGTGGTGGGAGACGTTTaGGTAGGAGAGGAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: TGVEAQHLNVAPDSGQQWVVGDV*VGEEAL
Trigger: CAGAGCCTCCTCTCCTACCAAAACGTCTCCCACCAC...CCACTGCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGGCTTCAACACCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CAA 90 bp CCAGGTTCAGGCTCCATCTCTCCAGGCACCCCTGGCACCTCATCCTCTAGAGGATCCTCTCGTCGCCCATaGGACCGTGGCTCATCTCGA +
Preference number: 5 (lower is better)
Translates to: PGSGSISPGTPGTSSSRGSSRRP*DRGSSR
Trigger: TCGAGATGAGCCACGGTCCAATGGGCGACGAGAGGA...TCCTCTAGAGGATGAGGTGCCAGGGGTGCCTGGAGAGATGGAGCCTGAACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACGCCTGCTCCAGGAGCTaGAACCTCCGGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHACSRS*NLRARN
Trigger: GTTCCTGGCCCGGAGGTTCAAGCTCCTGGAGCAGGC...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CCAGGTTCAGGCTCCATCTCTCCAGGCACCCCTGGCACCTCATCCTCTAGAGGAAGCTGGTTCAGAACCTaGTGCAGGACGGCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: PGSGSISPGTPGTSSSRGSWFRT*CRTALA
Trigger: GGCCAACGCCGTCCTGCACAAGGTTCTGAACCAGCT...TCCTCTAGAGGATGAGGTGCCAGGGGTGCCTGGAGAGATGGAGCCTGAACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCAGCAGGCCCCAGCGCTaGAGCTGGGGGTCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFSRPQR*SWGSAS
Trigger: CGAGGCCGACCCCCAGCTCAAGCGCTGGGGCCTGCT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS CCA 90 bp AGTTTCTTGGTGCGGACAGGGCCATCAGGCCGGCCTGAGGCACTGTaGACACTGCCACTGTCCAGGTCTGATTCCTCAGCCTCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: SFLVRTGPSGRPEAL*TLPLSRSDSSASGS
Trigger: TGAACCAGAGGCTGAGGAATCAGACCTGGACAGTGGCAGTGTCCACAGTGCCTCAGGCCGGCCTGATGGCCCTGTCCGCACCAAGAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000452447.1
ENST00000571249.1
ENST00000572579.1
ENST00000672274.1
ENST00000672838.1
CDS CCA 90 bp GGACCTTCTTCTTCTTCCTTCCTGGCCGGCCTCTCTTTAGTTTCTTaGTGCGGACAGGGCCATCAGGCCGGCCTGAGGCACTGTGGACAC +
Preference number: 5 (lower is better)
Translates to: GPSSSSFLAGLSLVS*CGQGHQAGLRHCGH
Trigger: GTGTCCACAGTGCCTCAGGCCGGCCTGATGGCCCTGTCCGCACCAAGAAACTAAAGAGAGGCCGGCCAGGAAGGAAGAAGAAGAAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000452447.1
ENST00000572579.1
ENST00000672838.1
CDS CCA 90 bp CCACCTTCTTCTTCTTCCTTCCTGGCCGGCCTCTCTTTAGTTTCTTaGTGCGGACAGGGCCATCAGGCCGGCCTGAGGCACTGTGGACAC +
Preference number: 5 (lower is better)
Translates to: PPSSSSFLAGLSLVS*CGQGHQAGLRHCGH
Trigger: GTGTCCACAGTGCCTCAGGCCGGCCTGATGGCCCTGTCCGCACCAAGAAACTAAAGAGAGGCCGGCCAGGAAGGAAGAAGAAGAAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571249.1
CDS CCA 90 bp CCTTATCTATCCCAAAGAAGACTAGAAATCACTCCACTAGGAGGGTaGTCTGAGGGGGACACCGCTGGGCGCCTGACGCGGCGCAGCGGT +
Preference number: 5 (lower is better)
Translates to: PYLSQRRLEITPLGG*SEGDTAGRLTRRSG
Trigger: ACCGCTGCGCCGCGTCAGGCGCCCAGCGGTGTCCCCCTCAGACCACCCTCCTAGTGGAGTGATTTCTAGTCTTCTTTGGGATAGATAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672274.1
CDS-3UTR CAA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACATCTCCCTGCTCCCTTaGGGAACTAGGGGGCCATAC +
Preference number: 5 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDISLLP*GTRGPY
Trigger: GTATGGCCCCCTAGTTCCCAAAGGGAGCAGGGAGAT...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCGCAGCTGCTGACCCCTaGAAGGGGTTGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTAAADP*KGLLAL
Trigger: CAGTGCCAACAACCCCTTCAAGGGGTCAGCAGCTGC...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGATGGCCCGGCTGTCCTaGTCACCCGTGTATGTCACC +
Preference number: 5 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMMARLS*SPVYVT
Trigger: GGTGACATACACGGGTGACAAGGACAGCCGGGCCAT...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGTGCTTGCGAACCCGCTaGCCCTTGCCTAGATTCCGG +
Preference number: 5 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMCLRTR*PLPRFR
Trigger: CCGGAATCTAGGCAAGGGCAAGCGGGTTCGCAAGCA...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGAGGTGCAGGGACTGTaGGTAGCAGAAGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDEVQGL*VAEASG
Trigger: TCCTGAGGCTTCTGCTACCAACAGTCCCTGCACCTC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTACGGCGTTGGCCGGCTaGTTCCCCGCCAGCGACTCC +
Preference number: 5 (lower is better)
Translates to: LEQVGELLFGLREYHPTITALAG*FPASDS
Trigger: GGAGTCGCTGGCGGGGAACAAGCCGGCCAACGCCGT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCACGGCGTTGGCCGGCTaGTTCCCCGCCAGCGACTCC +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFTALAG*FPASDS
Trigger: GGAGTCGCTGGCGGGGAACAAGCCGGCCAACGCCGT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCAGCACTGGAGGGCCGTaGGTGGCGGCTGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSSTGGP*VAAVMK
Trigger: CTTCATCACAGCCGCCACCAACGGCCCTCCAGTGCT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACAGCACTGGAGGGCCGTaGGTGGCGGCTGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHSTGGP*VAAVMK
Trigger: CTTCATCACAGCCGCCACCAACGGCCCTCCAGTGCT...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCATCTCCCTGCTCCCTTaGGGAACTAGGGGGCCATAC +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTISLLP*GTRGPY
Trigger: GTATGGCCCCCTAGTTCCCAAAGGGAGCAGGGAGAT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATCTTCTTCTTCCTCCTaGGCCTCCCACTGGACCCCC +
Preference number: 5 (lower is better)
Translates to: GSLEQVGELLFGLREYHPSSSSS*ASHWTP
Trigger: GGGGGTCCAGTGGGAGGCCAAGGAGGAAGAAGAAGA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCATGGCCCGGCTGTCCTaGTCACCCGTGTATGTCACC +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSMARLS*SPVYVT
Trigger: GGTGACATACACGGGTGACAAGGACAGCCGGGCCAT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGATCGTCAAGCTCCTGCTaGGACATGGAGCCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGSSSSC*DMEPAL
Trigger: CAAGGCAGGCTCCATGTCCAAGCAGGAGCTTGACGA...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCCCAGCACCTCAATGTaGCCCCCGACTCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFPSTSM*PPTRAS
Trigger: GCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGTGGTGGGAGACGTTTaGGTAGGAGAGGAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMVVGDV*VGEEAL
Trigger: CAGAGCCTCCTCTCCTACCAAAACGTCTCCCACCAC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGAGGTGCAGGGACTGTaGGTAGCAGAAGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGEVQGL*VAEASG
Trigger: TCCTGAGGCTTCTGCTACCAACAGTCCCTGCACCTC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGCTAGAGGAATCTTCCTaGGCTCCAGCCGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMLEESS*APAAPQ
Trigger: TTGGGGAGCGGCTGGAGCCAAGGAAGATTCCTCTAG...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCTCCTCTCGTCGCCCATaGGACCGTGGCTCATCTCGA +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSSSRRP*DRGSSR
Trigger: TCGAGATGAGCCACGGTCCAATGGGCGACGAGAGGA...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTGCCTGCTCCAGGAGCTaGAACCTCCGGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSACSRS*NLRARN
Trigger: GTTCCTGGCCCGGAGGTTCAAGCTCCTGGAGCAGGC...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACAGCTGGTTCAGAACCTaGTGCAGGACGGCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHSWFRT*CRTALA
Trigger: GGCCAACGCCGTCCTGCACAAGGTTCTGAACCAGCT...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCAGCTGGTTCAGAACCTaGTGCAGGACGGCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSSWFRT*CRTALA
Trigger: GGCCAACGCCGTCCTGCACAAGGTTCTGAACCAGCT...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCAGCACTGGAGGGCCGTaGGTGGCGGCTGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTSTGGP*VAAVMK
Trigger: CTTCATCACAGCCGCCACCAACGGCCCTCCAGTGCT...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGTGGGAGGAAGGTACTaGGAAGACCCTGCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGVGGRY*EDPASH
Trigger: ATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCAC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACGAGCTCCTCTTTGGCTaGAGGGAGTATCACCCAACC +
Preference number: 5 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDELLFG*REYHPT
Trigger: GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTC...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS TCA 90 bp CTTCTGCTTCTTGGGTCCTCGTTTTCTCTTCTTCACACCCAATGCTaGCGGCAGCAGCCGAATGTCATCCTTATCTGGCGGCGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: LLLLGSSFSLLHTQC*RQQPNVILIWRRGR
Trigger: CCGCCCCCGCCGCCAGATAAGGATGACATTCGGCTGCTGCCGTCAGCATTGGGTGTGAAGAAGAGAAAACGAGGACCCAAGAAGCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380358.9
CDS-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACTTTCCCCGAAGCTTCTaGCGTCCATCAGGCACTCGG +
Preference number: 5 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHFPRSF*RPSGTR
Trigger: CCGAGTGCCTGATGGACGCAAGAAGCTTCGGGGAAA...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTCTTCTTCTTCCTCCTaGGCCTCCCACTGGACCCCC +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELSSSSS*ASHWTP
Trigger: GGGGGTCCAGTGGGAGGCCAAGGAGGAAGAAGAAGA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCATTTCCATCTGCCTGTaGAGGGGCTGGCACTGCTAC +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTISICL*RGWHCY
Trigger: GTAGCAGTGCCAGCCCCTCAACAGGCAGATGGAAAT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGCCAGGAAGGGACCTTTaGTGTGGCCCTCCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMPGRDL*CGPPCR
Trigger: TCTACAAGGAGGGCCACACAAAAGGTCCCTTCCTGG...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGAGCACTCGGTGTCCTaGCTCCTTCAGCTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSEHSVS*LLQLSQ
Trigger: CTGCGAAAGCTGAAGGAGCAAGGACACCGAGTGCTC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCGAACCCGCTTGCCCTaGCCTAGATTCCGGGCTAGG +
Preference number: 5 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSRTRLP*PRFRAR
Trigger: CCTAGCCCGGAATCTAGGCAAGGGCAAGCGGGTTCG...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACGAACCCGCTTGCCCTaGCCTAGATTCCGGGCTAGG +
Preference number: 5 (lower is better)
Translates to: DSPLPHETELILQGNGWGRTRLP*PRFRAR
Trigger: CCTAGCCCGGAATCTAGGCAAGGGCAAGCGGGTTCG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATCCGGAGCTGCCTCTTaGACTGTCTACGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: GSLEQVGELLFGLREYHPSGAAS*TVYALQ
Trigger: CTGAAGGGCGTAGACAGTCAAAGAGGCAGCTCCGGA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCTCCGGAGCTGCCTCTTaGACTGTCTACGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSSGAAS*TVYALQ
Trigger: CTGAAGGGCGTAGACAGTCAAAGAGGCAGCTCCGGA...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGTGGTGGGAGACGTTTaGGTAGGAGAGGAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: GSLEQVGELLFGLREYHPVVGDV*VGEEAL
Trigger: CAGAGCCTCCTCTCCTACCAAAACGTCTCCCACCAC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACGAGGTGCAGGGACTGTaGGTAGCAGAAGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHEVQGL*VAEASG
Trigger: TCCTGAGGCTTCTGCTACCAACAGTCCCTGCACCTC...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGAGGTGCAGGGACTGTaGGTAGCAGAAGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSEVQGL*VAEASG
Trigger: TCCTGAGGCTTCTGCTACCAACAGTCCCTGCACCTC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCTAGAGGAATCTTCCTaGGCTCCAGCCGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSLEESS*APAAPQ
Trigger: TTGGGGAGCGGCTGGAGCCAAGGAAGATTCCTCTAG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACCACCATCGGCGATATaGAACATGAACCGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGPPSAI*NMNRGF
Trigger: GAAGCCCCGGTTCATGTTCAATATCGCCGATGGTGG...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTGCCTGCTCCAGGAGCTaGAACCTCCGGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: LEQVGELLFGLREYHPTIACSRS*NLRARN
Trigger: GTTCCTGGCCCGGAGGTTCAAGCTCCTGGAGCAGGC...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTACGGCGTTGGCCGGCTaGTTCCCCGCCAGCGACTCC +
Preference number: 5 (lower is better)
Translates to: LFKALFPTKVPKGQARLITALAG*FPASDS
Trigger: GGAGTCGCTGGCGGGGAACAAGCCGGCCAACGCCGT...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACACAGTCTTCAAGGCTaGGTGGGAAAGGTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGHSLQG*VGKVCG
Trigger: CCCACACACCTTTCCCACCAAGCCTTGAAGACTGTG...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACCTGCCCTCCACTATTTaGCTCTGGTCCCAACGACAA +
Preference number: 5 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDLPSTI*LWSQRQ
Trigger: TTGTCGTTGGGACCAGAGCAAAATAGTGGAGGGCAG...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS GCA 90 bp GGTGCTTCCTTCTTCGTTTCCGACCCGGTCCGGTTCCATATTCACTaGCCCCACTCTCTGACTTCTCCCGGTACTCATCTCGCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: GASFFVSDPVRFHIH*PHSLTSPGTHLAQN
Trigger: GTTCTGAGCGAGATGAGTACCGGGAGAAGTCAGAGAGTGGGGGCAGTGAATATGGAACCGGACCGGGTCGGAAACGAAGAAGGAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000570758.1
ENST00000672274.1
ENST00000672838.1
CDS CCA 90 bp CTTTTCCTCTCGTCGCCCATTGGACCGTGGCTCATCTCGAGGCCCTaGTCGAAGCTCCCGGTCACCTTTTACATCTTCTCTCTTGCCCAA +
Preference number: 5 (lower is better)
Translates to: LFLSSPIGPWLISRP*SKLPVTFYIFSLAQ
Trigger: TTGGGCAAGAGAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGATGAGCCACGGTCCAATGGGCGACGAGAGGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000380358.9
ENST00000682063.1
CDS-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAAGGGGGCCATACCCTTaGTTTCCCGATCTCACCCTT +
Preference number: 5 (lower is better)
Translates to: GSLEQVGELLFGLREYHPRGPYP*FPDLTL
Trigger: AAGGGTGAGATCGGGAAACAAAGGGTATGGCCCCCT...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR CAA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGCAGCTGCTGACCCCTaGAAGGGGTTGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: DSPLPHETELILQGNGWGAAADP*KGLLAL
Trigger: CAGTGCCAACAACCCCTTCAAGGGGTCAGCAGCTGC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCTTGCCCTCTTTGGTTTaGGCTCTTCGGATGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSLPSLV*ALRMGG
Trigger: CCCACCCATCCGAAGAGCCAAAACCAAAGAGGGCAA...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTCTTCTTCTTCCTCCTaGGCCTCCCACTGGACCCCC +
Preference number: 5 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSSSSSS*ASHWTP
Trigger: GGGGGTCCAGTGGGAGGCCAAGGAGGAAGAAGAAGA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTAGCTCCCCGCCGTCCTaGCATACGCGGCAGTACTCC +
Preference number: 5 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPSSPPS*HTRQYS
Trigger: GGAGTACTGCCGCGTATGCAAGGACGGCGGGGAGCT...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTTATCCACACTGTGGTaGATGATGCGGTGGACGGTC +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTLSTLW*MMRWTV
Trigger: GACCGTCCACCGCATCATCAACCACAGTGTGGATAA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTTCTTCTTCTTATACTaGCGGGGCTGGGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTFFFLY*RGWAGS
Trigger: AGACCCTGCCCAGCCCCGCAAGTATAAGAAGAAGAA...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCCCAGGAAGGGACCTTTaGTGTGGCCCTCCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSPGRDL*CGPPCR
Trigger: TCTACAAGGAGGGCCACACAAAAGGTCCCTTCCTGG...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGAGCACTCGGTGTCCTaGCTCCTTCAGCTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELEHSVS*LLQLSQ
Trigger: CTGCGAAAGCTGAAGGAGCAAGGACACCGAGTGCTC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCGAACCCGCTTGCCCTaGCCTAGATTCCGGGCTAGG +
Preference number: 5 (lower is better)
Translates to: LEQVGELLFGLREYHPTIRTRLP*PRFRAR
Trigger: CCTAGCCCGGAATCTAGGCAAGGGCAAGCGGGTTCG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTGCTTGCGAACCCGCTaGCCCTTGCCTAGATTCCGG +
Preference number: 5 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSCLRTR*PLPRFR
Trigger: CCGGAATCTAGGCAAGGGCAAGCGGGTTCGCAAGCA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTCCGGAGCTGCCTCTTaGACTGTCTACGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTSGAAS*TVYALQ
Trigger: CTGAAGGGCGTAGACAGTCAAAGAGGCAGCTCCGGA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCCCAGCACCTCAATGTaGCCCCCGACTCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LFKALFPTKVPKGQARLIPSTSM*PPTRAS
Trigger: GCTGGCCCGAGTCGGGGGCAACATTGAGGTGCTGGG...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCAGCACTGGAGGGCCGTaGGTGGCGGCTGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFSTGGP*VAAVMK
Trigger: CTTCATCACAGCCGCCACCAACGGCCCTCCAGTGCT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCGTGGGAGGAAGGTACTaGGAAGACCCTGCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTVGGRY*EDPASH
Trigger: ATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCAC...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACGTCTGTATCCAGGCCTaGAGGAGGGAGGGTAGTAGA +
Preference number: 5 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHVCIQA*RREGSR
Trigger: TCTACTACCCTCCCTCCTCAAGGCCTGGATACAGAC...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTGGCACCTCATCCTCTAGAGGAATCTTCCTTGGCTCCAGCCGCTCCCCAAGTGCTGCCCTCCACTATTTaGCTCTGGTCCCAACGACAA +
Preference number: 5 (lower is better)
Translates to: LAPHPLEESSLAPAAPQVLPSTI*LWSQRQ
Trigger: TTGTCGTTGGGACCAGAGCAAAATAGTGGAGGGCAG...CACTTGGGGAGCGGCTGGAGCCAAGGAAGATTCCTCTAGAGGATGAGGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS TCA 90 bp TCGTTTCCGACCCGGTCCGGTTCCATATTCACTGCCCCCACTCTCTaGCTTCTCCCGGTACTCATCTCGCTCAGAACCAAATTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SFPTRSGSIFTAPTL*LLPVLISLRTKFLL
Trigger: GAGGAGGAATTTGGTTCTGAGCGAGATGAGTACCGGGAGAAGTCAGAGAGTGGGGGCAGTGAATATGGAACCGGACCGGGTCGGAAACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000570758.1
ENST00000672274.1
ENST00000672838.1
CDS TCA 90 bp AGGGGACACAGAGGCTGGGGCAGGTCCCTCTATTGGGCACGGATGTaGATGCTATCAGACATGGATGAGGGTTGGCTTGCACAAGTCCTA +
Preference number: 5 (lower is better)
Translates to: RGHRGWGRSLYWARM*MLSDMDEGWLAQVL
Trigger: TAGGACTTGTGCAAGCCAACCCTCATCCATGTCTGATAGCATTCACATCCGTGCCCAATAGAGGGACCTGCCCCAGCCTCTGTGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481999.1
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCGCAGCTGCTGACCCCTaGAAGGGGTTGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFAAADP*KGLLAL
Trigger: CAGTGCCAACAACCCCTTCAAGGGGTCAGCAGCTGC...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGATTATGGCCTGGACCTTaGCCCTCTTTGGTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGLWPGP*PSLVLA
Trigger: AGCCAAAACCAAAGAGGGCAAAGGTCCAGGCCATAA...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGTTATGGCCTGGACCTTaGCCCTCTTTGGTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMLWPGP*PSLVLA
Trigger: AGCCAAAACCAAAGAGGGCAAAGGTCCAGGCCATAA...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTTTCCCCGAAGCTTCTaGCGTCCATCAGGCACTCGG +
Preference number: 5 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSFPRSF*RPSGTR
Trigger: CCGAGTGCCTGATGGACGCAAGAAGCTTCGGGGAAA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCCCTCCTTTCTTCCTCTaGCCACCCAGAAGCCCTAGT +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTPPFFL*PPRSPS
Trigger: ACTAGGGCTTCTGGGTGGCAAGAGGAAGAAAGGAGG...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTCCATCTGCCTGTaGAGGGGCTGGCACTGCTAC +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTISICL*RGWHCY
Trigger: GTAGCAGTGCCAGCCCCTCAACAGGCAGATGGAAAT...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATTATCCACACTGTGGTaGATGATGCGGTGGACGGTC +
Preference number: 5 (lower is better)
Translates to: GSLEQVGELLFGLREYHPLSTLW*MMRWTV
Trigger: GACCGTCCACCGCATCATCAACCACAGTGTGGATAA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACCCCCCTTTGATGGCATaGTCCTCAAAGGAGAATTCA +
Preference number: 5 (lower is better)
Translates to: AVWEEGTWKTLPAISHPDPPLMA*SSKENS
Trigger: TGAATTCTCCTTTGAGGACAATGCCATCAAAGGGGG...GTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGCTTTCTTGCCCCCTTaGATGGCATTGTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMAFLPP*MALSSK
Trigger: CTTTGAGGACAATGCCATCAAAGGGGGCAAGAAAGC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAAGGAAGCCCTCCAAGTaGTTAAATCTCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGRKPSK*LNLSGV
Trigger: CACCCCAGAGAGATTTAACAACTTGGAGGGCTTCCT...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGAGGAAGCAGAATTGTaGGGCCCCAGGAGCATTAAA +
Preference number: 5 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGEEAEL*GPRSIK
Trigger: TTTAATGCTCCTGGGGCCCAACAATTCTGCTTCCTC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAACGTACTGTGCCACCTaGAAGGAGCTGAGATACTCA +
Preference number: 5 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGTYCAT*KELRYS
Trigger: TGAGTATCTCAGCTCCTTCAAGGTGGCACAGTACGT...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTTCCGGAGCTGCCTCTTaGACTGTCTACGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSSGAAS*TVYALQ
Trigger: CTGAAGGGCGTAGACAGTCAAAGAGGCAGCTCCGGA...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCATTGACCAACGCCCATaGATGTGCTCAAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTIDQRP*MCSNSC
Trigger: GCAGGAGTTTGAGCACATCAATGGGCGTTGGTCAAT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCTAGAGGAATCTTCCTaGGCTCCAGCCGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSLEESS*APAAPQ
Trigger: TTGGGGAGCGGCTGGAGCCAAGGAAGATTCCTCTAG...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCCCACCATCGGCGATATaGAACATGAACCGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELPPSAI*NMNRGF
Trigger: GAAGCCCCGGTTCATGTTCAATATCGCCGATGGTGG...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTTGACTTCCTCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGAGAGGCTGAACAGCAGTaGACTTCCTCCCTCATAACT +
Preference number: 5 (lower is better)
Translates to: VDFLPHNCSTLHVGRGRGEAEQQ*TSSLIT
Trigger: AGTTATGAGGGAGGAAGTCAACTGCTGTTCAGCCTC...TCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGAGGAAGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGTCTGTATCCAGGCCTaGAGGAGGGAGGGTAGTAGA +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELVCIQA*RREGSR
Trigger: TCTACTACCCTCCCTCCTCAAGGCCTGGATACAGAC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCAAGTCCAGTCTCACCTaGTCTTCTTCCCGCACGACG +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELKSSLT*SSSRTT
Trigger: CGTCGTGCGGGAAGAAGACAAGGTGAGACTGGACTT...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS CCA 90 bp ACCCTCCTCCCAGGTCCCAAGACTACTATCTGTACTGTACTGTACTaGCCTTTCAAACAGCTACCCGCCCAGGACCCAAGCATTCGGTTC +
Preference number: 5 (lower is better)
Translates to: TLLPGPKTTICTVLY*PFKQLPAQDPSIRF
Trigger: GAACCGAATGCTTGGGTCCTGGGCGGGTAGCTGTTTGAAAGGCCAGTACAGTACAGTACAGATAGTAGTCTTGGGACCTGGGAGGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572750.1
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCAGGTCAGAAGCAGAGTaGCTGATGACTTCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTRSEAE*LMTSVP
Trigger: TGGAACAGAAGTCATCAGCAACTCTGCTTCTGACCT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGAGGTCAGAAGCAGAGTaGCTGATGACTTCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMRSEAE*LMTSVP
Trigger: TGGAACAGAAGTCATCAGCAACTCTGCTTCTGACCT...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATTGCCCTCTTTGGTTTaGGCTCTTCGGATGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DSPLPHETELILQGNGWGLPSLV*ALRMGG
Trigger: CCCACCCATCCGAAGAGCCAAAACCAAAGAGGGCAA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTTCTTCTTCTTATACTaGCGGGGCTGGGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTFFFLY*RGWAGS
Trigger: AGACCCTGCCCAGCCCCGCAAGTATAAGAAGAAGAA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACAGGAAGCCCTCCAAGTaGTTAAATCTCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHRKPSK*LNLSGV
Trigger: CACCCCAGAGAGATTTAACAACTTGGAGGGCTTCCT...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCTTTCTCTTGGCCACTaGTGTGATTCGCTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHLSLGH*CDSLFH
Trigger: GTGGAAGAGCGAATCACACAAGTGGCCAAGAGAAAG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTTCGTCAAGCTCCTGCTaGGACATGGAGCCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: LEQVGELLFGLREYHPTISSSSC*DMEPAL
Trigger: CAAGGCAGGCTCCATGTCCAAGCAGGAGCTTGACGA...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTCGTCAAGCTCCTGCTaGGACATGGAGCCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFSSSSC*DMEPAL
Trigger: CAAGGCAGGCTCCATGTCCAAGCAGGAGCTTGACGA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACGTACTGTGCCACCTaGAAGGAGCTGAGATACTCA +
Preference number: 5 (lower is better)
Translates to: GSLEQVGELLFGLREYHPTYCAT*KELRYS
Trigger: TGAGTATCTCAGCTCCTTCAAGGTGGCACAGTACGT...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCGAACCCGCTTGCCCTaGCCTAGATTCCGGGCTAGG +
Preference number: 5 (lower is better)
Translates to: LFKALFPTKVPKGQARLIRTRLP*PRFRAR
Trigger: CCTAGCCCGGAATCTAGGCAAGGGCAAGCGGGTTCG...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTTGCTTGCGAACCCGCTaGCCCTTGCCTAGATTCCGG +
Preference number: 5 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPCLRTR*PLPRFR
Trigger: CCGGAATCTAGGCAAGGGCAAGCGGGTTCGCAAGCA...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCATCATTGTAGTTAACTaGCTTGCGAACCCGCTTGCC +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTIIVVN*LANPLA
Trigger: GGCAAGCGGGTTCGCAAGCAAGTTAACTACAATGAT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATCCTCTCGTCGCCCATaGGACCGTGGCTCATCTCGA +
Preference number: 5 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEESSRRP*DRGSSR
Trigger: TCGAGATGAGCCACGGTCCAATGGGCGACGAGAGGA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCACAGTCTTCAAGGCTaGGTGGGAAAGGTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSHSLQG*VGKVCG
Trigger: CCCACACACCTTTCCCACCAAGCCTTGAAGACTGTG...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGAGAGCTCCTCTTTGGCTaGAGGGAGTATCACCCAACC +
Preference number: 5 (lower is better)
Translates to: DSPLPHETELILQGNGWGELLFG*REYHPT
Trigger: GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTC...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTGAGCTCCTCTTTGGCTaGAGGGAGTATCACCCAACC +
Preference number: 5 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSELLFG*REYHPT
Trigger: GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTC...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCCTGCCCTCCACTATTTaGCTCTGGTCCCAACGACAA +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELLPSTI*LWSQRQ
Trigger: TTGTCGTTGGGACCAGAGCAAAATAGTGGAGGGCAG...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS TCA 90 bp CTTCTGCTTCTTGGGTCCTCGTTTTCTCTTCTTCACACCCAATGCTaGCGGCAGCAGCCGAATGTCATCCTTATCTCGGTCTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LLLLGSSFSLLHTQC*RQQPNVILISVSAA
Trigger: GGCTGCTGAGACCGAGATAAGGATGACATTCGGCTGCTGCCGTCAGCATTGGGTGTGAAGAAGAGAAAACGAGGACCCAAGAAGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671866.1
CDS GCA 90 bp AAGAGGGAAATCCCAAATTCTAATCCCCCATCACTCCTAAGGCCATaGACCCACCTGACTTCTCTCTGTCCCCACGGTACCCAGGTTCAG +
Preference number: 5 (lower is better)
Translates to: KREIPNSNPPSLLRP*THLTSLCPHGTQVQ
Trigger: CTGAACCTGGGTACCGTGGGGACAGAGAGAAGTCAGGTGGGTGCATGGCCTTAGGAGTGATGGGGGATTAGAATTTGGGATTTCCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572750.1
CDS CCA 90 bp CAGCCAGGGATCTGTATGGTGCATTCACAGTCCAAGGCCCCTAACTaGATGATGTTAAGCAGTATGGCAGGCATGCAGTTCCACTGCCAG +
Preference number: 5 (lower is better)
Translates to: QPGICMVHSQSKAPN*MMLSSMAGMQFHCQ
Trigger: CTGGCAGTGGAACTGCATGCCTGCCATACTGCTTAACATCATCCAGTTAGGGGCCTTGGACTGTGAATGCACCATACAGATCCCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481999.1
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCAGGGGGCCATACCCTTaGTTTCCCGATCTCACCCTT +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFRGPYP*FPDLTL
Trigger: AAGGGTGAGATCGGGAAACAAAGGGTATGGCCCCCT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCCTCCTTTCTTCCTCTaGCCACCCAGAAGCCCTAGT +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFPPFFL*PPRSPS
Trigger: ACTAGGGCTTCTGGGTGGCAAGAGGAAGAAAGGAGG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACCTCTCTTTAGTTTCTaGGTGCGGACAGGGCCATCA +
Preference number: 5 (lower is better)
Translates to: DSPLPHETELILQGNGWGPLFSF*VRTGPS
Trigger: TGATGGCCCTGTCCGCACCAAGAAACTAAAGAGAGG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCTCTTTCACTTTACGCTaGTCGCTCTTCCCATCATCC +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSSFTLR*SLFPSS
Trigger: GGATGATGGGAAGAGCGACAAGCGTAAAGTGAAAGA...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTATGGCCCGGCTGTCCTaGTCACCCGTGTATGTCACC +
Preference number: 5 (lower is better)
Translates to: LFKALFPTKVPKGQARLIMARLS*SPVYVT
Trigger: GGTGACATACACGGGTGACAAGGACAGCCGGGCCAT...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCCCCTTTGATGGCATaGTCCTCAAAGGAGAATTCA +
Preference number: 5 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHPPLMA*SSKENS
Trigger: TGAATTCTCCTTTGAGGACAATGCCATCAAAGGGGG...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCGCTTTCTTGCCCCCTTaGATGGCATTGTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELAFLPP*MALSSK
Trigger: CTTTGAGGACAATGCCATCAAAGGGGGCAAGAAAGC...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATTAAAGACATCTGCCTaGAGTCTCCGCAGCATGTGT +
Preference number: 5 (lower is better)
Translates to: GSLEQVGELLFGLREYHPLKTSA*SLRSMC
Trigger: ACACATGCTGCGGAGACTCAAGGCAGATGTCTTTAA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCATCAATTTCCTCAATCTaGTCTTCTTCCCGCACGACG +
Preference number: 5 (lower is better)
Translates to: GSLEQVGELLFGLREYHPSISSI*SSSRTT
Trigger: CGTCGTGCGGGAAGAAGACAAGATTGAGGAAATTGA...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTGACCAACGCCCATaGATGTGCTCAAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTIDQRP*MCSNSC
Trigger: GCAGGAGTTTGAGCACATCAATGGGCGTTGGTCAAT...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTCCTCTCGTCGCCCATaGGACCGTGGCTCATCTCGA +
Preference number: 5 (lower is better)
Translates to: LFKALFPTKVPKGQARLISSRRP*DRGSSR
Trigger: TCGAGATGAGCCACGGTCCAATGGGCGACGAGAGGA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCCCACCATCGGCGATATaGAACATGAACCGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFPPSAI*NMNRGF
Trigger: GAAGCCCCGGTTCATGTTCAATATCGCCGATGGTGG...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCACTGTGCCAGATCTCATaGAGTTTCCCCGAGGAAATA +
Preference number: 5 (lower is better)
Translates to: GSLEQVGELLFGLREYHPLCQIS*SFPEEI
Trigger: TATTTCCTCGGGGAAACTCAATGAGATCTGGCACAG...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTAGCTGGTTCAGAACCTaGTGCAGGACGGCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LFKALFPTKVPKGQARLISWFRT*CRTALA
Trigger: GGCCAACGCCGTCCTGCACAAGGTTCTGAACCAGCT...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGTGGGAGGAAGGTACTaGGAAGACCCTGCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEVGGRY*EDPASH
Trigger: ATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCAC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCGAGGCTGAACAGCAGTaGACTTCCTCCCTCATAACT +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTEAEQQ*TSSLIT
Trigger: AGTTATGAGGGAGGAAGTCAACTGCTGTTCAGCCTC...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTGTCTGTATCCAGGCCTaGAGGAGGGAGGGTAGTAGA +
Preference number: 5 (lower is better)
Translates to: LEQVGELLFGLREYHPTIVCIQA*RREGSR
Trigger: TCTACTACCCTCCCTCCTCAAGGCCTGGATACAGAC...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACTGCCCTCCACTATTTaGCTCTGGTCCCAACGACAA +
Preference number: 5 (lower is better)
Translates to: DSPLPHETELILQGNGWGLPSTI*LWSQRQ
Trigger: TTGTCGTTGGGACCAGAGCAAAATAGTGGAGGGCAG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTGGCACCTCATCCTCTAGAGGAATCTTCCTTGGCTCCAGCCGCTCCCCAAGTGTACATTTTCTGGACATaGCGCATGTTCCATGCCATC +
Preference number: 5 (lower is better)
Translates to: LAPHPLEESSLAPAAPQVYIFWT*RMFHAI
Trigger: GATGGCATGGAACATGCGCAATGTCCAGAAAATGTA...CACTTGGGGAGCGGCTGGAGCCAAGGAAGATTCCTCTAGAGGATGAGGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS TCA 90 bp CTTCTGCTTCTTGGGTCCTCGTTTTCTCTTCTTCACACCCAATGCTaGCGGCAGCAGCCGAATGTCATCCTTATCAGGCATCCTGTCACC +
Preference number: 5 (lower is better)
Translates to: LLLLGSSFSLLHTQC*RQQPNVILIRHPVT
Trigger: GGTGACAGGATGCCTGATAAGGATGACATTCGGCTGCTGCCGTCAGCATTGGGTGTGAAGAAGAGAAAACGAGGACCCAAGAAGCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS TCA 90 bp CTTCTGGTCTATTCAGAAAGCCAAGAGGGAAAGGGGAGGCCGGGTTaGCACAAAGACCCATCTCAACCTCGGATCCTTTCACGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LLVYSESQEGKGRPG*HKDPSQPRILSRFS
Trigger: AGAGAAGCGTGAAAGGATCCGAGGTTGAGATGGGTCTTTGTGTCAACCCGGCCTCCCCTTTCCCTCTTGGCTTTCTGAATAGACCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672838.1
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCGGTCATTTTTACTTCTaGCCCACAGGATCACAGTGT +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSGHFYF*PTGSQC
Trigger: ACACTGTGATCCTGTGGGCAAGAAGTAAAAATGACC...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000358181.8
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTTCTCCTTCTGCTTCTaGGGTCCTCGTTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELFSFCF*GPRFLF
Trigger: GAAGAGAAAACGAGGACCCAAGAAGCAGAAGGAGAA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCTTCTCCTTCTGCTTCTaGGGTCCTCGTTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTFSFCF*GPRFLF
Trigger: GAAGAGAAAACGAGGACCCAAGAAGCAGAAGGAGAA...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATTGCCCTCTTTGGTTTaGGCTCTTCGGATGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEELPSLV*ALRMGG
Trigger: CCCACCCATCCGAAGAGCCAAAACCAAAGAGGGCAA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTTTTCCCCGAAGCTTCTaGCGTCCATCAGGCACTCGG +
Preference number: 5 (lower is better)
Translates to: LFKALFPTKVPKGQARLIFPRSF*RPSGTR
Trigger: CCGAGTGCCTGATGGACGCAAGAAGCTTCGGGGAAA...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAACCTCCTTTCTTCCTCTaGCCACCCAGAAGCCCTAGT +
Preference number: 5 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEPPFFL*PPRSPS
Trigger: ACTAGGGCTTCTGGGTGGCAAGAGGAAGAAAGGAGG...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTATTTCCATCTGCCTGTaGAGGGGCTGGCACTGCTAC +
Preference number: 5 (lower is better)
Translates to: TGKLCILGSVGGRYLEDPISICL*RGWHCY
Trigger: GTAGCAGTGCCAGCCCCTCAACAGGCAGATGGAAAT...AGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACACAACTTCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCATCTTAAAAGCTTTCTaGCCCCCTTTGATGGCATTG +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTILKAF*PPLMAL
Trigger: CAATGCCATCAAAGGGGGCAAGAAAGCTTTTAAGAT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCAGAACCCTGAAAAACTaGGACTGGTTGTTCTTGAGT +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTRTLKN*DWLFLS
Trigger: ACTCAAGAACAACCAGTCCAAGTTTTTCAGGGTTCT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGAGCACTCGGTGTCCTaGCTCCTTCAGCTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: LFKALFPTKVPKGQARLIEHSVS*LLQLSQ
Trigger: CTGCGAAAGCTGAAGGAGCAAGGACACCGAGTGCTC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGACTTTCTCTTGGCCACTaGTGTGATTCGCTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: DSPLPHETELILQGNGWGLSLGH*CDSLFH
Trigger: GTGGAAGAGCGAATCACACAAGTGGCCAAGAGAAAG...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTCAATTTCCTCAATCTaGTCTTCTTCCCGCACGACG +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELSISSI*SSSRTT
Trigger: CGTCGTGCGGGAAGAAGACAAGATTGAGGAAATTGA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCATCATTGTAGTTAACTaGCTTGCGAACCCGCTTGCC +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELIIVVN*LANPLA
Trigger: GGCAAGCGGGTTCGCAAGCAAGTTAACTACAATGAT...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp AGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCCAGACTTCTTCTCACCAGCTTTACATCTTCTCTCTaGCCCAAATCCCCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: RYLEDPASHLPPRLLLTSFTSSL*PKSPVS
Trigger: GGAAACAGGGGATTTGGGCAAGAGAGAAGATGTAAA...GCTGGTGAGAAGAAGTCTGGGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCCTGTGCCAGATCTCATaGAGTTTCCCCGAGGAAATA +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTLCQIS*SFPEEI
Trigger: TATTTCCTCGGGGAAACTCAATGAGATCTGGCACAG...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGTGGGAGGAAGGTACTaGGAAGACCCTGCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: LFKALFPTKVPKGQARLIVGGRY*EDPASH
Trigger: ATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCAC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAAGTCTGTATCCAGGCCTaGAGGAGGGAGGGTAGTAGA +
Preference number: 5 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEVCIQA*RREGSR
Trigger: TCTACTACCCTCCCTCCTCAAGGCCTGGATACAGAC...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTACATCTTCTGCTCTCTaGCCCAAATCCCCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLTSSAL*PKSPVS
Trigger: GGAAACAGGGGATTTGGGCAAGAGAGCAGAAGATGT...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CAA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATTCTCCTTCTGCTTCTaGGGTCCTCGTTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: DSPLPHETELILQGNGWGFSFCF*GPRFLF
Trigger: GAAGAGAAAACGAGGACCCAAGAAGCAGAAGGAGAA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTTATGGCCTGGACCTTaGCCCTCTTTGGTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFLWPGP*PSLVLA
Trigger: AGCCAAAACCAAAGAGGGCAAAGGTCCAGGCCATAA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAACCTCTCTTTAGTTTCTaGGTGCGGACAGGGCCATCA +
Preference number: 5 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEEPLFSF*VRTGPS
Trigger: TGATGGCCCTGTCCGCACCAAGAAACTAAAGAGAGG...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GATTCTCCACTTCCACATGAGACAGAGCTGATTCTGCAGGGAAACGGCTGGGGATCTTTCACTTTACGCTaGTCGCTCTTCCCATCATCC +
Preference number: 5 (lower is better)
Translates to: DSPLPHETELILQGNGWGSFTLR*SLFPSS
Trigger: GGATGATGGGAAGAGCGACAAGCGTAAAGTGAAAGA...TCCCCAGCCGTTTCCCTGCAGAATCAGCTCTGTCTCATGTGGAAGTGGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp CCTCCCCACAACCATTTACTGGGAAGTTGTGTATACTTGGCAGTGTGGGAGGAATTATCCACACTGTGGTaGATGATGCGGTGGACGGTC +
Preference number: 5 (lower is better)
Translates to: PPHNHLLGSCVYLAVWEELSTLW*MMRWTV
Trigger: GACCGTCCACCGCATCATCAACCACAGTGTGGATAA...TTCCTCCCACACTGCCAAGTATACACAACTTCCCAGTAAATGGTTGTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GGGTCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAGTGTCTCCAGTAGCTTaGCTTATGTTCTTCGTATTC +
Preference number: 5 (lower is better)
Translates to: GSLEQVGELLFGLREYHPVSPVA*LMFFVF
Trigger: GAATACGAAGAACATAAGCAAAGCTACTGGAGACAC...TGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACATCTTAAAAGCTTTCTaGCCCCCTTTGATGGCATTG +
Preference number: 5 (lower is better)
Translates to: YLAVWEEGTWKTLPAISHILKAF*PPLMAL
Trigger: CAATGCCATCAAAGGGGGCAAGAAAGCTTTTAAGAT...GTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTCTTTCTCTTGGCCACTaGTGTGATTCGCTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LEQVGELLFGLREYHPTILSLGH*CDSLFH
Trigger: GTGGAAGAGCGAATCACACAAGTGGCCAAGAGAAAG...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCACGTACTGTGCCACCTaGAAGGAGCTGAGATACTCA +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFTYCAT*KELRYS
Trigger: TGAGTATCTCAGCTCCTTCAAGGTGGCACAGTACGT...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTACGTACTGTGCCACCTaGAAGGAGCTGAGATACTCA +
Preference number: 5 (lower is better)
Translates to: LEQVGELLFGLREYHPTITYCAT*KELRYS
Trigger: TGAGTATCTCAGCTCCTTCAAGGTGGCACAGTACGT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GTGTATACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTATCATTGTAGTTAACTaGCTTGCGAACCCGCTTGCC +
Preference number: 5 (lower is better)
Translates to: VYTWQCGRKVLGRPCQPSIIVVN*LANPLA
Trigger: GGCAAGCGGGTTCGCAAGCAAGTTAACTACAATGAT...AGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGTATACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ATCTCGAGGCCCTGGTCGAAGCTCCCGGTCACCTTTTACATCTTCTGCTCTCTTATCATTGTAGTTAACTaGCTTGCGAACCCGCTTGCC +
Preference number: 5 (lower is better)
Translates to: ISRPWSKLPVTFYIFCSLIIVVN*LANPLA
Trigger: GGCAAGCGGGTTCGCAAGCAAGTTAACTACAATGAT...AAGAGAGCAGAAGATGTAAAAGGTGACCGGGAGCTTCGACCAGGGCCTCGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470531.5
CDS-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTATTGACCAACGCCCATaGATGTGCTCAAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: LEQVGELLFGLREYHPTIIDQRP*MCSNSC
Trigger: GCAGGAGTTTGAGCACATCAATGGGCGTTGGTCAAT...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCTTTACATCTTCTCTCTaGCCCAAATCCCCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELFTSSL*PKSPVS
Trigger: GGAAACAGGGGATTTGGGCAAGAGAGAAGATGTAAA...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330494.12
ENST00000380358.9
CDS-3UTR CAA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCCACCATCGGCGATATaGAACATGAACCGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: LFKALFPTKVPKGQARLIPPSAI*NMNRGF
Trigger: GAAGCCCCGGTTCATGTTCAATATCGCCGATGGTGG...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGGTTGATAATGGCAAATaGAGCATCATTCTGGATGTC +
Preference number: 5 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMVDNGK*SIILDV
Trigger: GACATCCAGAATGATGCTCAATTTGCCATTATCAAC...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp TCCCTCATAACTGCTCCACCCTCCACGTGGGGAGAGGTAGGGGACGGTAACATGAGAAAGTTCCCCTTATaGGCTTCAGTTTTAAATGGC +
Preference number: 5 (lower is better)
Translates to: SLITAPPSTWGEVGDGNMRKFPL*ASVLNG
Trigger: GCCATTTAAAACTGAAGCCAATAAGGGGAACTTTCT...CATGTTACCGTCCCCTACCTCTCCCCACGTGGAGGGTGGAGCAGTTATGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCCCATTTACTGGGAAGTaGTGTATACTTGGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELPFTGK*CILGSV
Trigger: CACACTGCCAAGTATACACAACTTCCCAGTAAATGG...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCGAGGCTGAACAGCAGTaGACTTCCTCCCTCATAACT +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFEAEQQ*TSSLIT
Trigger: AGTTATGAGGGAGGAAGTCAACTGCTGTTCAGCCTC...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCATTGAGGCTGAACAGCAGTaGACTTCCTCCCTCATAACT +
Preference number: 5 (lower is better)
Translates to: LEQVGELLFGLREYHPTIEAEQQ*TSSLIT
Trigger: AGTTATGAGGGAGGAAGTCAACTGCTGTTCAGCCTC...AATGGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS-3UTR CAA 90 bp CTCTTCAAAGCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTGAGCTCCTCTTTGGCTaGAGGGAGTATCACCCAACC +
Preference number: 5 (lower is better)
Translates to: LFKALFPTKVPKGQARLIELLFG*REYHPT
Trigger: GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTC...AATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGCTTTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
ENST00000470531.5
CDS TCA 90 bp CTTCTGCTTCTTGGGTCCTCGTTTTCTCTTCTTCACACCCAATGCTaGCGGCAGCAGCCGAATGTCATCCTTATCTCCGAAAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: LLLLGSSFSLLHTQC*RQQPNVILISESHL
Trigger: CAGATGACTTTCGGAGATAAGGATGACATTCGGCTGCTGCCGTCAGCATTGGGTGTGAAGAAGAGAAAACGAGGACCCAAGAAGCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672838.1
CDS-3UTR CAA 90 bp ACTTGGCAGTGTGGGAGGAAGGTACTTGGAAGACCCTGCCAGCCATCTCCCACCAGCCCTAGTTTTATTTaGAGTGGTGCCATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: TWQCGRKVLGRPCQPSPTSPSFI*SGAIFF
Trigger: AAAGAAAATGGCACCACTCAAAATAAAACTAGGGCT...GGTGGGAGATGGCTGGCAGGGTCTTCCAAGTACCTTCCTCCCACACTGCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp GCTCTCTTCCCCACAAAAGTTCCTAAAGGCCAGGCAAGGCTGATTCTCCACTTCTCTTTCACTTTACGCTaGTCGCTCTTCCCATCATCC +
Preference number: 5 (lower is better)
Translates to: ALFPTKVPKGQARLILHFSFTLR*SLFPSS
Trigger: GGATGATGGGAAGAGCGACAAGCGTAAAGTGAAAGA...GAAGTGGAGAATCAGCCTTGCCTGGCCTTTAGGAACTTTTGTGGGGAAGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp ATTCTCTCCCACCCTTCTAGGTTACCTGGGTCCCTAGAACAGGTTGGGGAGCTCATCTTAAAAGCTTTCTaGCCCCCTTTGATGGCATTG +
Preference number: 5 (lower is better)
Translates to: ILSHPSRLPGSLEQVGELILKAF*PPLMAL
Trigger: CAATGCCATCAAAGGGGGCAAGAAAGCTTTTAAGAT...GAGCTCCCCAACCTGTTCTAGGGACCCAGGTAACCTAGAAGGGTGGGAGAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCAGAACCCTGAAAAACTaGGACTGGTTGTTCTTGAGT +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTRTLKN*DWLFLS
Trigger: ACTCAAGAACAACCAGTCCAAGTTTTTCAGGGTTCT...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330494.12
ENST00000358181.8
ENST00000380358.9
CDS-3UTR CAA 90 bp TCCCTAGAACAGGTTGGGGAGCTCCTCTTTGGCTTGAGGGAGTATCACCCAACCAGCAAGTCTAACATTTaGGTCATCTGCGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: SLEQVGELLFGLREYHPTSKSNI*VICEKM
Trigger: CATCTTCTCGCAGATGACCAAAATGTTAGACTTGCT...GGTTGGGTGATACTCCCTCAAGCCAAAGAGGAGCTCCCCAACCTGTTCTAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330494.12