RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000173575

Ensembl transcript IDs: ENST00000394196.9, ENST00000420239.7, ENST00000625243.1, ENST00000625463.1, ENST00000625662.2, ENST00000625990.3, ENST00000626782.2, ENST00000626874.2, ENST00000627460.1, ENST00000627622.1, ENST00000628118.1, ENST00000628181.1, ENST00000628375.2, ENST00000629104.1, ENST00000629136.1, ENST00000629346.2, ENST00000630016.1, ENST00000630813.1, ENST00000635856.1, ENST00000636306.1, ENST00000636410.1, ENST00000636861.1, ENST00000636881.1, ENST00000637572.1, ENST00000637613.1, ENST00000637789.1

Found 1360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACACAGGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATaGGAGGACTGTGGCCAGGTGGCTCATGCAGTCACCGGAGCTTTG +
Preference number: 1 (lower is better)
Translates to: TQALPSPLSVTAGPP*EDCGQVAHAVTGAL
Trigger: CAAAGCTCCGGTGACTGCATGAGCCACCTGGCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCCTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp ATCACTGTGTGGCCTAAGTGGAGACACAGGCCCTGCCCTCTCCACTaGGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCCAGGTGG +
Preference number: 1 (lower is better)
Translates to: ITVWPKWRHRPCPLH*ASRQALHGRTVARW
Trigger: CCACCTGGCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCCTGTGTCTCCACTTAGGCCACACAGTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 90 bp GATGAGTGGGGCACAGATGGCCTAAAGCAGCCTGGACCCTTGGCATaGCTCCCCTCGCCCAACGTGGCAGCCCTCAGAGGAGCCGGAAGA +
Preference number: 1 (lower is better)
Translates to: DEWGTDGLKQPGPLA*LPSPNVAALRGAGR
Trigger: TCTTCCGGCTCCTCTGAGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCATCTGTGCCCCACTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 90 bp GCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTaGCCAGGTGGCTCATGCAGTCACCGGAGCTTTGCTTCAGGACAT +
Preference number: 1 (lower is better)
Translates to: ALSTERHGRPSMGGL*PGGSCSHRSFASGH
Trigger: ATGTCCTGAAGCAAAGCTCCGGTGACTGCATGAGCCACCTGGCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 90 bp CTTCCGGGACCCAGACCCTCATCTGGAAACCACACAGGCCAGCCCTaGGATGCTCTGTGTAGCAGGGAGCAAGGGTCACACCACAGCCAC +
Preference number: 1 (lower is better)
Translates to: LPGPRPSSGNHTGQP*DALCSREQGSHHSH
Trigger: GTGGCTGTGGTGTGACCCTTGCTCCCTGCTACACAGAGCATCGCAGGGCTGGCCTGTGTGGTTTCCAGATGAGGGTCTGGGTCCCGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 90 bp CGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCCAGGTGGCTCATaGAGTCACCGGAGCTTTGCTTCAGGACATGTGTGCTACAAGTCC +
Preference number: 1 (lower is better)
Translates to: RHGRPSMGGLWPGGS*SHRSFASGHVCYKS
Trigger: GGACTTGTAGCACACATGTCCTGAAGCAAAGCTCCGGTGACTGCATGAGCCACCTGGCCACAGTCCTCCCATGGAGGGCCTGCCGTGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp GCGTGCAAAGTGTTTGGGCTTCCCTTCGAAGGGCTGAGGAATGACTaGAAGGAGAGTGAGCCCCGGGCTCTGCTGGCACCTGTCTGTCCG +
Preference number: 1 (lower is better)
Translates to: ACKVFGLPFEGLRND*KESEPRALLAPVCP
Trigger: CGGACAGACAGGTGCCAGCAGAGCCCGGGGCTCACTCTCCTTTCAGTCATTCCTCAGCCCTTCGAAGGGAAGCCCAAACACTTTGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 90 bp GCCCGTCAAAGTGGGAGGCCAGAACTAGGCTGGAATGGGATGGGGTaGCAAAGTGCAGGAGTGGTGACCCGAATCAGAGCTGGACCCAGT +
Preference number: 1 (lower is better)
Translates to: ARQSGRPELGWNGMG*QSAGVVTRIRAGPS
Trigger: ACTGGGTCCAGCTCTGATTCGGGTCACCACTCCTGCACTTTGGCACCCCATCCCATTCCAGCCTAGTTCTGGCCTCCCACTTTGACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 90 bp GCTCCTCCTCCAAGTGCCCGTCAAAGTGGGAGGCCAGAACTAGGCTaGAATGGGATGGGGTGCCAAAGTGCAGGAGTGGTGACCCGAATC +
Preference number: 1 (lower is better)
Translates to: APPPSARQSGRPELG*NGMGCQSAGVVTRI
Trigger: GATTCGGGTCACCACTCCTGCACTTTGGCACCCCATCCCATTCCAGCCTAGTTCTGGCCTCCCACTTTGACGGGCACTTGGAGGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp TCTGCAGCACAGCGTGCAAAGTGTTTGGGCTTCCCTTCGAAGGGCTaGGGAATGACTGAAAGGAGAGTGAGCCCCGGGCTCTGCTGGCAC +
Preference number: 1 (lower is better)
Translates to: SAAQRAKCLGFPSKG*GMTERRVSPGLCWH
Trigger: GTGCCAGCAGAGCCCGGGGCTCACTCTCCTTTCAGTCATTCCTCAGCCCTTCGAAGGGAAGCCCAAACACTTTGCACGCTGTGCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp ACAACCCCAAGAACTGTGAGGGTTCAGCAAGCGGGGTGGGTCCACTaGGCTCTCAACACAAGCTTCCGGGACCCAGACCCTCATCTGGAA +
Preference number: 1 (lower is better)
Translates to: TTPRTVRVQQAGWVH*ALNTSFRDPDPHLE
Trigger: TTCCAGATGAGGGTCTGGGTCCCGGAAGCTTGTGTTGAGAGCTCAGTGGACCCACCCCGCTTGCTGAACCCTCACAGTTCTTGGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp CCGGGCTCTGCTGGCACCTGTCTGTCCGGCTCTGAAAGACCGCAGTaGTTAGCTTGGGGTTTCACCTGGCCCTTTTCTAAGGCCATAGTG +
Preference number: 1 (lower is better)
Translates to: PGSAGTCLSGSERPQ*LAWGFTWPFSKAIV
Trigger: CACTATGGCCTTAGAAAAGGGCCAGGTGAAACCCCAAGCTAATCACTGCGGTCTTTCAGAGCCGGACAGACAGGTGCCAGCAGAGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 90 bp CATCCCAGTGAAGCTGGTACACACACAGTCAGCTCCTCCTCCAAGTaGCCGTCAAAGTGGGAGGCCAGAACTAGGCTGGAATGGGATGGG +
Preference number: 1 (lower is better)
Translates to: HPSEAGTHTVSSSSK*PSKWEARTRLEWDG
Trigger: CCCATCCCATTCCAGCCTAGTTCTGGCCTCCCACTTTGACGGGCACTTGGAGGAGGAGCTGACTGTGTGTGTACCAGCTTCACTGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 90 bp CATGGGAGGACTGTGGCCAGGTGGCTCATGCAGTCACCGGAGCTTTaGTTCAGGACATGTGTGCTACAAGTCCAGGCTGGACAACCCCAA +
Preference number: 1 (lower is better)
Translates to: HGRTVARWLMQSPEL*FRTCVLQVQAGQPQ
Trigger: TTGGGGTTGTCCAGCCTGGACTTGTAGCACACATGTCCTGAAGCAAAGCTCCGGTGACTGCATGAGCCACCTGGCCACAGTCCTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 90 bp GTCACCGGAGCTTTGCTTCAGGACATGTGTGCTACAAGTCCAGGCTaGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCGGGGTGGGTC +
Preference number: 1 (lower is better)
Translates to: VTGALLQDMCATSPG*TTPRTVRVQQAGWV
Trigger: GACCCACCCCGCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACACATGTCCTGAAGCAAAGCTCCGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 90 bp CCCGGTGGTCTCGGTCACTGCTGTACTGGTCATAAGGCCTCTTTCTaGACATGTTGTTGGGTCGATAGCTTCCGGAACGGTGGGCATCCA +
Preference number: 1 (lower is better)
Translates to: PGGLGHCCTGHKASF*TCCWVDSFRNGGHP
Trigger: TGGATGCCCACCGTTCCGGAAGCTATCGACCCAACAACATGTCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACCGAGACCACCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR TCA 90 bp GTGACCCGAATCAGAGCTGGACCCAGTGAAAGGCCTCCCATTCCTTaGAGTGCTCCTTCAGCCAGTGAGTTGACAGCAGCAGCATGTCCA +
Preference number: 1 (lower is better)
Translates to: VTRIRAGPSERPPIP*SAPSASELTAAACP
Trigger: TGGACATGCTGCTGCTGTCAACTCACTGGCTGAAGGAGCACTTCAAGGAATGGGAGGCCTTTCACTGGGTCCAGCTCTGATTCGGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 90 bp AATCAACCAAATCACACACTGTTCACCAGGTCCCAGCAGCCTCCATaGACCAGTTCCTGCCCCGACCATGCACTAAGGTCCTGGGAACAC +
Preference number: 1 (lower is better)
Translates to: NQPNHTLFTRSQQPP*TSSCPDHALRSWEH
Trigger: GTGTTCCCAGGACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTGGTGAACAGTGTGTGATTTGGTTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 90 bp CCAGGTGGCTCATGCAGTCACCGGAGCTTTGCTTCAGGACATGTGTaGTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCA +
Preference number: 1 (lower is better)
Translates to: PGGSCSHRSFASGHV*YKSRLDNPKNCEGS
Trigger: TGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACACATGTCCTGAAGCAAAGCTCCGGTGACTGCATGAGCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 90 bp TGCCTCACTCACAGTACTCAGTCAGCCAGAGAAACCTACCTTCCCTaGCACAGTGGGAAAAGGAGGCCCACTCAGGAGACCAAAGCTCTG +
Preference number: 1 (lower is better)
Translates to: CLTHSTQSARETYLP*HSGKRRPTQETKAL
Trigger: CAGAGCTTTGGTCTCCTGAGTGGGCCTCCTTTTCCCACTGTGCCAGGGAAGGTAGGTTTCTCTGGCTGACTGAGTACTGTGAGTGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 90 bp TCTCCGATTTTCAGCAGGCAGTTCCGGGTGTGTTCCAGCTGTTCTTaGACGTTGAGCCCCTTGTCAGGTTTGTCGAGCTGTTTCAGTGCC +
Preference number: 1 (lower is better)
Translates to: SPIFSRQFRVCSSCS*TLSPLSGLSSCFSA
Trigger: GGCACTGAAACAGCTCGACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGCTGGAACACACCCGGAACTGCCTGCTGAAAATCGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR CCA 90 bp GAAGGTTGTGTGAGGTATGGGACTGAGATATCAGAGAGTCCCGGCTaGAGCCTGAGGCCTCTGGACGAAATGGTTTCTTACCCCCAGTCA +
Preference number: 1 (lower is better)
Translates to: EGCVRYGTEISESPG*SLRPLDEMVSYPQS
Trigger: TGACTGGGGGTAAGAAACCATTTCGTCCAGAGGCCTCAGGCTCCAGCCGGGACTCTCTGATATCTCAGTCCCATACCTCACACAACCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR CCA 90 bp GGTCACTGCTGTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTaGGTCGATAGCTTCCGGAACGGTGGGCATCCATATGTCGCCGGT +
Preference number: 1 (lower is better)
Translates to: GHCCTGHKASFWTCC*VDSFRNGGHPYVAG
Trigger: ACCGGCGACATATGGATGCCCACCGTTCCGGAAGCTATCGACCCAACAACATGTCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR TCA 90 bp GCCCCAACTCGCCACTCCCCATCAGCAGCATCCATCATGTCAGAGTaGACCAAATCAACCAAATCACACACTGTTCACCAGGTCCCAGCA +
Preference number: 1 (lower is better)
Translates to: APTRHSPSAASIMSE*TKSTKSHTVHQVPA
Trigger: TGCTGGGACCTGGTGAACAGTGTGTGATTTGGTTGATTTGGTTCACTCTGACATGATGGATGCTGCTGATGGGGAGTGGCGAGTTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 90 bp CTTGCTGGCACTACTGAACCCCACATTAGAAGCCTGTTCACTGCCTaGACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCA +
Preference number: 1 (lower is better)
Translates to: LAGTTEPHIRSLFTA*TRTPTFVIATSWSA
Trigger: TGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCAGGCAGTGAACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTaGCTTGGGCAAGGCAATCATGGGCTAGAGTCAGTATTATCGGCA +
Preference number: 1 (lower is better)
Translates to: LPTLKGSTSQPNLPL*LGQGNHGLESVLSA
Trigger: TGCCGATAATACTGACTCTAGCCCATGATTGCCTTGCCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp CTTGGTAAAGGCATTCATGGTGCTGCCCAGGACACCAGCAAGCACTaGAGTCCTCACAAGTTACTTCAGGAGTTTAACCCTGCACACGCC +
Preference number: 1 (lower is better)
Translates to: LGKGIHGAAQDTSKH*SPHKLLQEFNPAHA
Trigger: GGCGTGTGCAGGGTTAAACTCCTGAAGTAACTTGTGAGGACTTCAGTGCTTGCTGGTGTCCTGGGCAGCACCATGAATGCCTTTACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 90 bp GGTGCCTGTCATAATAATCTCTGTGTCCCCGGTGGTCTCGGTCACTaGTGTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTGGGTC +
Preference number: 1 (lower is better)
Translates to: GACHNNLCVPGGLGH*CTGHKASFWTCCWV
Trigger: GACCCAACAACATGTCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACCGAGACCACCGGGGACACAGAGATTATTATGACAGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR GCA 90 bp CCTTTTCCCTCGCTGGCATTTTCTTTCAGCTGCTCTTCGTATTCCTaGATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGC +
Preference number: 1 (lower is better)
Translates to: PFPSLAFSFSCSSYS*IADTQLLWISSPRR
Trigger: GCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTGAAAGAAAATGCCAGCGAGGGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR CCA 90 bp TCACAGTACTCAGTCAGCCAGAGAAACCTACCTTCCCTGGCACAGTaGGAAAAGGAGGCCCACTCAGGAGACCAAAGCTCTGAAATGTAC +
Preference number: 1 (lower is better)
Translates to: SQYSVSQRNLPSLAQ*EKEAHSGDQSSEMY
Trigger: GTACATTTCAGAGCTTTGGTCTCCTGAGTGGGCCTCCTTTTCCCACTGTGCCAGGGAAGGTAGGTTTCTCTGGCTGACTGAGTACTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp CTCGCTGGCATTTTCTTTCAGCTGCTCTTCGTATTCCTGCATTGCTaGCACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATC +
Preference number: 1 (lower is better)
Translates to: LAGIFFQLLFVFLHC*HTAVVDQFTQALQI
Trigger: GATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTGAAAGAAAATGCCAGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR GCA 90 bp ACATCAAATAGAAATACAGACCTACTAGAAGAACGCAGGGCAAGATaGCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCA +
Preference number: 1 (lower is better)
Translates to: TSNRNTDLLEERRAR*PLGPDNREGWERGA
Trigger: TGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATCTTGCCCTGCGTTCTTCTAGTAGGTCTGTATTTCTATTTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR GCA 90 bp GCGCTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTaGTATGCACTCCAGCTTTATCTCCCTCACGAAGGTGAAAGTCTT +
Preference number: 1 (lower is better)
Translates to: ALQICHRLIYQLSIT*YALQLYLPHEGESL
Trigger: AAGACTTTCACCTTCGTGAGGGAGATAAAGCTGGAGTGCATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637789.1
3UTR CCA 90 bp GTTCTAGTGATCTCTCCAAAGGAGACCTATGATCCAGGGGTGACTTaGAATCGTGAGGAGATTTCTGAGAAGGGGGTGAGCGAGGATCTG +
Preference number: 1 (lower is better)
Translates to: VLVISPKETYDPGVT*NREEISEKGVSEDL
Trigger: CAGATCCTCGCTCACCCCCTTCTCAGAAATCTCCTCACGATTCCAAGTCACCCCTGGATCATAGGTCTCCTTTGGAGAGATCACTAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR TCA 90 bp CAAAGGGAAGGAAATGCAGCAGGAAGTGTTGACCTAGCGCAATACTaGAAGTTTCCCCCACTTGCTGGCACTACTGAACCCCACATTAGA +
Preference number: 1 (lower is better)
Translates to: QREGNAAGSVDLAQY*KFPPLAGTTEPHIR
Trigger: TCTAATGTGGGGTTCAGTAGTGCCAGCAAGTGGGGGAAACTTTCAGTATTGCGCTAGGTCAACACTTCCTGCTGCATTTCCTTCCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp GAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTaGGCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTAT +
Preference number: 1 (lower is better)
Translates to: EFNPAHAQQKGFHQL*AWTLTGTLYVQVSY
Trigger: ATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp GTTTCAGTGCCTTTTTCACGGGCCTCATCCTCTCCTTACATATGCTaGATGTCTCCTGGTCCAGATCATCATCCTCATCCTCTCCAATGG +
Preference number: 1 (lower is better)
Translates to: VSVPFSRASSSPYIC*MSPGPDHHPHPLQW
Trigger: CCATTGGAGAGGATGAGGATGATGATCTGGACCAGGAGACATTCAGCATATGTAAGGAGAGGATGAGGCCCGTGAAAAAGGCACTGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR GCA 90 bp TTCTTGCACGTTGAGCCCCTTGTCAGGTTTGTCGAGCTGTTTCAGTaGCTTTTTCACGGGCCTCATCCTCTCCTTACATATGCTGAATGT +
Preference number: 1 (lower is better)
Translates to: FLHVEPLVRFVELFQ*LFHGPHPLLTYAEC
Trigger: ACATTCAGCATATGTAAGGAGAGGATGAGGCCCGTGAAAAAGGCACTGAAACAGCTCGACAAACCTGACAAGGGGCTCAACGTGCAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR TCA 90 bp TCATTGTGTGACTTCCTAAATCAACTGTGTTTGCACCGTGAGGACTaGTGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAG +
Preference number: 1 (lower is better)
Translates to: SLCDFLNQLCLHRED*CNFQTHQARMSAAQ
Trigger: CTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCATCAGTCCTCACGGTGCAAACACAGTTGATTTAGGAAGTCACACAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 90 bp ATCTTTCAAAGCCAGACTCCAGGGAATACCATCCTCACAGATTCCTaGGGCAGCTTCTCCCATTCACAAGTGAGAGAATTTACCTGTGCA +
Preference number: 1 (lower is better)
Translates to: IFQSQTPGNTILTDS*GSFSHSQVREFTCA
Trigger: TGCACAGGTAAATTCTCTCACTTGTGAATGGGAGAAGCTGCCCCAGGAATCTGTGAGGATGGTATTCCCTGGAGTCTGGCTTTGAAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 90 bp AGGCCCACTCAGGAGACCAAAGCTCTGAAATGTACAAAGACAGTGTaGGAAAAATTAGTGTTGGCAGAGATGAAGCAGTTGTGGAAGCTG +
Preference number: 1 (lower is better)
Translates to: RPTQETKALKCTKTV*EKLVLAEMKQLWKL
Trigger: CAGCTTCCACAACTGCTTCATCTCTGCCAACACTAATTTTTCCCACACTGTCTTTGTACATTTCAGAGCTTTGGTCTCCTGAGTGGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp CAGAAATATCCAGCACCCAACAAGGTAAATGTTACATCTGGCATCTaGCAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCC +
Preference number: 1 (lower is better)
Translates to: QKYPAPNKVNVTSGI*QKLLGTESTRGARP
Trigger: GGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCAGATGTAACATTTACCTTGTTGGGTGCTGGATATTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR TCA 90 bp CAGATGCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATaGCCACTGGAGCTCAGAGACTTCTACATTGGTGCTTCTCTGACC +
Preference number: 1 (lower is better)
Translates to: QMQFNNHNFLLKPIQ*PLELRDFYIGASLT
Trigger: GGTCAGAGAAGCACCAATGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR CCA 90 bp TATAAGAATCTTTCTCTTGATACCTTTCACAGGAGGGCAATACCCTaGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATA +
Preference number: 1 (lower is better)
Translates to: YKNLSLDTFHRRAIP*APSCLYSQQHQSII
Trigger: TATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGGTATTGCCCTCCTGTGAAAGGTATCAAGAGAAAGATTCTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR GCA 90 bp AAGCCATCATCTTTCACTTCTCCCTCTTCTGATGGATTATCTGAATaGCTAGGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTG +
Preference number: 1 (lower is better)
Translates to: KPSSFTSPSSDGLSE*LGDESSIPCSSFSL
Trigger: CAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCCTAGGCATTCAGATAATCCATCAGAAGAGGGAGAAGTGAAAGATGATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000629104.1
3UTR TCA 90 bp TGTTCACCACAGGTACTTATTTCCATCTGCCCACCACATGATGTGTaGTTCTGTCTACTCTATTTCTTCAAGCTGTGCAAAGGGAAGGAA +
Preference number: 1 (lower is better)
Translates to: CSPQVLISICPPHDV*FCLLYFFKLCKGKE
Trigger: TTCCTTCCCTTTGCACAGCTTGAAGAAATAGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTGGTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp AGGTTCACTTCCTGCTGTAATATGGACAGGACCCTGAGATCGCTTTaGTTTACTCGAAGATTTGGCATCACCACTTTTAGGCTTCTCTTT +
Preference number: 1 (lower is better)
Translates to: RFTSCCNMDRTLRSL*FTRRFGITTFRLLF
Trigger: AAAGAGAAGCCTAAAAGTGGTGATGCCAAATCTTCGAGTAAATCAAAGCGATCTCAGGGTCCTGTCCATATTACAGCAGGAAGTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR TCA 90 bp CACAATGTAAAGCTTCGGCTCATCGTACTACTGGTGGCATTGTACTaGAGTAAAGAGGGTGCAGCTTCAGAAGACTTTGACTCTTCAATT +
Preference number: 1 (lower is better)
Translates to: HNVKLRLIVLLVALY*SKEGAASEDFDSSI
Trigger: AATTGAAGAGTCAAAGTCTTCTGAAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAAGCTTTACATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR CCA 90 bp CTTAAAACCCATTCAATGACCACTGGAGCTCAGAGACTTCTACATTaGTGCTTCTCTGACCACATTTTCCCTATCACACTCTTTGGCAAT +
Preference number: 1 (lower is better)
Translates to: LKTHSMTTGAQRLLH*CFSDHIFPITLFGN
Trigger: ATTGCCAAAGAGTGTGATAGGGAAAATGTGGTCAGAGAAGCACCAATGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR TCA 90 bp AGAAACTTGTTCACCACAGGTACTTATTTCCATCTGCCCACCACATaGTGTGTGATTCTGTCTACTCTATTTCTTCAAGCTGTGCAAAGG +
Preference number: 1 (lower is better)
Translates to: RNLFTTGTYFHLPTT*CVILSTLFLQAVQR
Trigger: CCTTTGCACAGCTTGAAGAAATAGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTGGTGAACAAGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 90 bp TTCAATGACCACTGGAGCTCAGAGACTTCTACATTGGTGCTTCTCTaGCCACATTTTCCCTATCACACTCTTTGGCAATTAAATACTGGT +
Preference number: 1 (lower is better)
Translates to: FNDHWSSETSTLVLL*PHFPYHTLWQLNTG
Trigger: ACCAGTATTTAATTGCCAAAGAGTGTGATAGGGAAAATGTGGTCAGAGAAGCACCAATGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR TCA 90 bp ATCTCAAACTCCTCTTCATGTTGGATAATGGATTTCACATTAACCTaGACTCCGGATATCTTGATTGTTGGACCTCTCCTTTTCCCTGGT +
Preference number: 1 (lower is better)
Translates to: ISNSSSCWIMDFTLT*TPDILIVGPLLFPG
Trigger: ACCAGGGAAAAGGAGAGGTCCAACAATCAAGATATCCGGAGTTCAGGTTAATGTGAAATCCATTATCCAACATGAAGAGGAGTTTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR TCA 90 bp TTACCAGATCTTCCAAAAACAAAGCACGACTTTGACACGTTTATATaGAATTTTCCCACTGTAAATTCAAGGTACAGTGCAAATGACGCA +
Preference number: 1 (lower is better)
Translates to: LPDLPKTKHDFDTFI*NFPTVNSRYSANDA
Trigger: TGCGTCATTTGCACTGTACCTTGAATTTACAGTGGGAAAATTTCATATAAACGTGTCAAAGTCGTGCTTTGTTTTTGGAAGATCTGGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CCA 90 bp GATGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAAGCCCCGGGCTCTGCTaGCACCTGTCTGTCCGGCTC +
Preference number: 2 (lower is better)
Translates to: DGLKQPGPLAWLPSPNVASPGLC*HLSVRL
Trigger: GAGCCGGACAGACAGGTGCCAGCAGAGCCCGGGGCT...TGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCTCCCAAGAACACATTTaGGGGGTGTACCTGCTCCCC +
Preference number: 2 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGSQEHI*GVYLLP
Trigger: GGGGAGCAGGTACACCCCTCAAATGTGTTCTTGGGA...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTGCGGGGTGGGTCCACTaGGCTCTCAACACAAGCTTC +
Preference number: 2 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPAGWVH*ALNTSF
Trigger: GAAGCTTGTGTTGAGAGCTCAGTGGACCCACCCCGC...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCCCAGGCCAGAATGTCTaGAGCACAGCGTGCAAAGTG +
Preference number: 2 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGPGQNV*STACKV
Trigger: CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGG...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCCCTGTCGCTTCCCCATaGTGGATTGTTGTTGCCACC +
Preference number: 2 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGPVASP*WIVVAT
Trigger: GGTGGCAACAACAATCCACCATGGGGAAGCGACAGG...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR TCA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGGGAAACACATCCCAGTaGAGCTGGTACACACACAGT +
Preference number: 2 (lower is better)
Translates to: GPALSTERHGRPSMGGLWGNTSQ*SWYTHS
Trigger: ACTGTGTGTGTACCAGCTTCACTGGGATGTGTTTCC...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp GATGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGGGATTCCAGTTCCCTaGCCACACTACTCCCCACCT +
Preference number: 2 (lower is better)
Translates to: DGLKQPGPLAWLPSPNVAGIPVP*PHYSPP
Trigger: AGGTGGGGAGTAGTGTGGCCAGGGAACTGGAATCCC...TGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp CAGGTCCCAGCAGCCTCCATGCACCAGTTCCTGCCCCGACCATGCACTAAGGTCAGGACTGTGGCCAGGTaGCTCATGCAGTCACCGGAG +
Preference number: 2 (lower is better)
Translates to: QVPAASMHQFLPRPCTKVRTVAR*LMQSPE
Trigger: CTCCGGTGACTGCATGAGCCACCTGGCCACAGTCCT...GACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp CAGGTCCCAGCAGCCTCCATGCACCAGTTCCTGCCCCGACCATGCACTAAGGTCCAGTGCTGCTCATACTaGTGGTGCCTGTCGCTTCCC +
Preference number: 2 (lower is better)
Translates to: QVPAASMHQFLPRPCTKVQCCSY*WCLSLP
Trigger: GGGAAGCGACAGGCACCATCAGTATGAGCAGCACTG...GACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR GCA 90 bp CCCCATCTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGTTGTCCCCACCCGCTTaGCCCAACTCGCCACTCCCC +
Preference number: 2 (lower is better)
Translates to: PHLPTLKGSTSQPNLPLWLSPPA*PNSPLP
Trigger: GGGGAGTGGCGAGTTGGGGCAAGCGGGTGGGGACAA...CCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAGATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp CAGGTCCCAGCAGCCTCCATGCACCAGTTCCTGCCCCGACCATGCACTAAGGTCCCCCTTCAAGTCCTATaGTTGTCCCCACCCGCTTGC +
Preference number: 2 (lower is better)
Translates to: QVPAASMHQFLPRPCTKVPLQVL*LSPPAC
Trigger: GCAAGCGGGTGGGGACAAGCATAGGACTTGAAGGGG...GACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp ATGACTGAAAGGAGAGTGAGCCCCGGGCTCTGCTGGCACCTGTCTGTCCGGCTCAGGCATTCATGGTGCTaGCCAGGACACCAGCAAGCA +
Preference number: 2 (lower is better)
Translates to: MTERRVSPGLCWHLSVRLRHSWC*PGHQQA
Trigger: TGCTTGCTGGTGTCCTGGGCAGCACCATGAATGCCT...GAGCCGGACAGACAGGTGCCAGCAGAGCCCGGGGCTCACTCTCCTTTCAGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp CAGGTCCCAGCAGCCTCCATGCACCAGTTCCTGCCCCGACCATGCACTAAGGTCAGGCCAGAACTAGGCTaGAATGGGATGGGGTGCCAA +
Preference number: 2 (lower is better)
Translates to: QVPAASMHQFLPRPCTKVRPELG*NGMGCQ
Trigger: TTGGCACCCCATCCCATTCCAGCCTAGTTCTGGCCT...GACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp CAGGCCAGCCCTGCGATGCTCTGTGTAGCAGGGAGCAAGGGTCACACCACAGCCGAAACCTACCTTCCCTaGCACAGTGGGAAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: QASPAMLCVAGSKGHTTAETYLP*HSGKRR
Trigger: CCTCCTTTTCCCACTGTGCCAGGGAAGGTAGGTTTC...GGCTGTGGTGTGACCCTTGCTCCCTGCTACACAGAGCATCGCAGGGCTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CAA 90 bp CCATGGGAGGACTGTGGCCAGGTGGCTCATGCAGTCACCGGAGCTTaGCTTCAGGACATGTGTGCTACAAGTCCAGGCTGGACAACCCCA +
Preference number: 2 (lower is better)
Translates to: PWEDCGQVAHAVTGA*LQDMCATSPGWTTP
Trigger: TGGGGTTGTCCAGCCTGGACTTGTAGCACACATGTCCTGAAGCAAAGCTCCGGTGACTGCATGAGCCACCTGGCCACAGTCCTCCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp CTGGCACTACTGAACCCCACATTAGAAGCCTGTTCACTGCCTGCACCAGGACCCGTTGGTCAGCAGGCCTaGCTCTGCATCCCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: LALLNPTLEACSLPAPGPVGQQA*LCIPFS
Trigger: GGAGAAGGGGATGCAGAGGCAGGCCTGCTGACCAAC...GGGTCCTGGTGCAGGCAGTGAACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGGTTGGTCAGCAGGCCTaGCTCTGCATCCCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGVGQQA*LCIPFS
Trigger: GGAGAAGGGGATGCAGAGGCAGGCCTGCTGACCAAC...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp AACACAAGCTTCCGGGACCCAGACCCTCATCTGGAAACCACACAGGCCAGCCCTTCTCTGTGTCCCCGGTaGTCTCGGTCACTGCTGTAC +
Preference number: 2 (lower is better)
Translates to: NTSFRDPDPHLETTQASPSLCPR*SRSLLY
Trigger: GTACAGCAGTGACCGAGACCACCGGGGACACAGAGA...AGGGCTGGCCTGTGTGGTTTCCAGATGAGGGTCTGGGTCCCGGAAGCTTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR TCA 90 bp AACACAAGCTTCCGGGACCCAGACCCTCATCTGGAAACCACACAGGCCAGCCCTATGCAGGACCTCTGGTaGCTCCTTTGCCCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: NTSFRDPDPHLETTQASPMQDLW*LLCPSF
Trigger: AAAGGAGGGGCAAAGGAGTCACCAGAGGTCCTGCAT...AGGGCTGGCCTGTGTGGTTTCCAGATGAGGGTCTGGGTCCCGGAAGCTTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp ATGACTGAAAGGAGAGTGAGCCCCGGGCTCTGCTGGCACCTGTCTGTCCGGCTCTCCAAAGGAGACCTATaGTCCAGGGGTGACTTGGAA +
Preference number: 2 (lower is better)
Translates to: MTERRVSPGLCWHLSVRLSKGDL*SRGDLE
Trigger: TTCCAAGTCACCCCTGGATCATAGGTCTCCTTTGGA...GAGCCGGACAGACAGGTGCCAGCAGAGCCCGGGGCTCACTCTCCTTTCAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR GCA 90 bp ATAGCTTCCGGAACGGTGGGCATCCATATGTCGCCGGTCCCCATAATGGTGGTCCCATGCACCAGTTCCTaGCCCGACCATGCACTAAGG +
Preference number: 2 (lower is better)
Translates to: IASGTVGIHMSPVPIMVVPCTSS*PDHALR
Trigger: CCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGG...GACCACCATTATGGGGACCGGCGACATATGGATGCCCACCGTTCCGGAAGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR GCA 90 bp ATGACTGAAAGGAGAGTGAGCCCCGGGCTCTGCTGGCACCTGTCTGTCCGGCTCTTTGAGGGGTGTACCTaGTCCCCTTCAAGTCCTATG +
Preference number: 2 (lower is better)
Translates to: MTERRVSPGLCWHLSVRLFEGCT*SPSSPM
Trigger: CATAGGACTTGAAGGGGAGCAGGTACACCCCTCAAA...GAGCCGGACAGACAGGTGCCAGCAGAGCCCGGGGCTCACTCTCCTTTCAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp CAGGCCAGCCCTGCGATGCTCTGTGTAGCAGGGAGCAAGGGTCACACCACAGCCAACTTTCTTTCCCTCTaGCAGTCTCCTCGATCTGCA +
Preference number: 2 (lower is better)
Translates to: QASPAMLCVAGSKGHTTANFLSL*QSPRSA
Trigger: TGCAGATCGAGGAGACTGGCAGAGGGAAAGAAAGTT...GGCTGTGGTGTGACCCTTGCTCCCTGCTACACAGAGCATCGCAGGGCTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGCCTTCCCTGGCACAGTaGGAAAAGGAGGCCCACTCA +
Preference number: 2 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGPSLAQ*EKEAHS
Trigger: TGAGTGGGCCTCCTTTTCCCACTGTGCCAGGGAAGG...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGTCCATGGGAGGACTGTaGCCAGGTGGCTCATGCAGT +
Preference number: 2 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGSMGGL*PGGSCS
Trigger: ACTGCATGAGCCACCTGGCCACAGTCCTCCCATGGA...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp CCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGTTCAGAGCTGGACCCAGTaGAAGGCCTCCCATTCCTTG +
Preference number: 2 (lower is better)
Translates to: PLTQPTPQSSKTHAGISVQSWTQ*KASHSL
Trigger: CAAGGAATGGGAGGCCTTTCACTGGGTCCAGCTCTG...AACACTGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp ATTTCTGAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGGGTGCAATGGGGGTACAGTGCTGCTCATACTaGTGGTGCCTGTCGCTTCCC +
Preference number: 2 (lower is better)
Translates to: ISEKGVSEDLRLQGAMGVQCCSY*WCLSLP
Trigger: GGGAAGCGACAGGCACCATCAGTATGAGCAGCACTG...TACCCCCATTGCACCCTGCAGTCTCAGATCCTCGCTCACCCCCTTCTCAGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR-3UTR GCA 90 bp AGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTAGCTCCTCCTCCAAGTaGCCGTCAAAGTGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: RSLTLHTPNRRVFTSSEPSSSSK*PSKWEA
Trigger: GGCCTCCCACTTTGACGGGCACTTGGAGGAGGAGCT...AGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp CTGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCAGAACTAGGCTGGAATaGGATGGGGTGCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: LHQDPHLCDCNKLVSRPARTRLE*DGVPKC
Trigger: GCACTTTGGCACCCCATCCCATTCCAGCCTAGTTCT...GGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp CCTCACAAGTTACTTCAGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTCGCTGGTGCTGGGCCTaGGCTGCTGCTCCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: PHKLLQEFNPAHAQQKGFRWCWA*AAAPAD
Trigger: GTCAGCAGGAGCAGCAGCCCAGGCCCAGCACCAGCG...AAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCTGAAGTAACTTGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp ATAGCTTCCGGAACGGTGGGCATCCATATGTCGCCGGTCCCCATAATGGTGGTCGTCGCTTCCCCATGGTaGATTGTTGTTGCCACCACC +
Preference number: 2 (lower is better)
Translates to: IASGTVGIHMSPVPIMVVVASPW*IVVATT
Trigger: GGTGGTGGCAACAACAATCCACCATGGGGAAGCGAC...GACCACCATTATGGGGACCGGCGACATATGGATGCCCACCGTTCCGGAAGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR-3UTR CCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCCCTATAACCAAGACATaGGATTCGCTGTGGCTGACA +
Preference number: 2 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPPITKT*DSLWLT
Trigger: TGTCAGCCACAGCGAATCCCATGTCTTGGTTATAGG...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR CAA 90 bp CGGGTGTGTTCCAGCTGTTCTTGCACGTTGAGCCCCTTGTCAGGTTaGTCGAGCTGTTTCAGTGCCTTTTTCACGGGCCTCATCCTCTCC +
Preference number: 2 (lower is better)
Translates to: RVCSSCSCTLSPLSG*SSCFSAFFTGLILS
Trigger: GGAGAGGATGAGGCCCGTGAAAAAGGCACTGAAACAGCTCGACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGCTGGAACACACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR CAA 90 bp AGGCAGTTCCGGGTGTGTTCCAGCTGTTCTTGCACGTTGAGCCCCTaGTCAGGTTTGTCGAGCTGTTTCAGTGCCTTTTTCACGGGCCTC +
Preference number: 2 (lower is better)
Translates to: RQFRVCSSCSCTLSP*SGLSSCFSAFFTGL
Trigger: GAGGCCCGTGAAAAAGGCACTGAAACAGCTCGACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGCTGGAACACACCCGGAACTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR TCA 90 bp ACATGTTGTTGGGTCGATAGCTTCCGGAACGGTGGGCATCCATATGTCGCCGGTTGCTCCTTCAGCCAGTaGGTTGACAGCAGCAGCATG +
Preference number: 2 (lower is better)
Translates to: TCCWVDSFRNGGHPYVAGCSFSQ*VDSSSM
Trigger: CATGCTGCTGCTGTCAACTCACTGGCTGAAGGAGCA...ACCGGCGACATATGGATGCCCACCGTTCCGGAAGCTATCGACCCAACAACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR GCA 90 bp CCCAACCCCACCCACAGGTTTCACATAATGAGGCCGAGTGTATCACTTCTCCCACCATGCACCAGTTCCTaGCCCGACCATGCACTAAGG +
Preference number: 2 (lower is better)
Translates to: PNPTHRFHIMRPSVSLLPPCTSS*PDHALR
Trigger: CCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGG...TGGGAGAAGTGATACACTCGGCCTCATTATGTGAAACCTGTGGGTGGGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCAGGCATTCATGGTGCTaGCCAGGACACCAGCAAGCA +
Preference number: 2 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASRHSWC*PGHQQA
Trigger: TGCTTGCTGGTGTCCTGGGCAGCACCATGAATGCCT...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp CCCTACCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCACACCACAGCCACATCTaGTTCATTCGGGGGATCCAA +
Preference number: 2 (lower is better)
Translates to: PYPSLSLLPSQVRPMLASHHSHI*FIRGIQ
Trigger: TTGGATCCCCCGAATGAAGCAGATGTGGCTGTGGTG...TGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGGTAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGCACACAGGCCAGCCCTaGGATGCTCTGTGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVHTGQP*DALCSR
Trigger: CCTGCTACACAGAGCATCGCAGGGCTGGCCTGTGTG...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp CCCTACCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGCTACAAGTCCAGGCTaGACAACCCCAAGAACTGTG +
Preference number: 2 (lower is better)
Translates to: PYPSLSLLPSQVRPMLASATSPG*TTPRTV
Trigger: CACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGC...TGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGGTAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CAA 90 bp GTCTCCGATTTTCAGCAGGCAGTTCCGGGTGTGTTCCAGCTGTTCTaGCACGTTGAGCCCCTTGTCAGGTTTGTCGAGCTGTTTCAGTGC +
Preference number: 2 (lower is better)
Translates to: VSDFQQAVPGVFQLF*HVEPLVRFVELFQC
Trigger: GCACTGAAACAGCTCGACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGCTGGAACACACCCGGAACTGCCTGCTGAAAATCGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR TCA 90 bp CATGTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCATGCTCCTTCAGCCAGTaGGTTGACAGCAGCAGCATG +
Preference number: 2 (lower is better)
Translates to: HVCYKSRLDNPKNCEGSACSFSQ*VDSSSM
Trigger: CATGCTGCTGCTGTCAACTCACTGGCTGAAGGAGCA...TGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp CCAGTTTATCTGTGTGGAAAGAGCGGTAATGGTCTGAGGGTCCCTGGCCATGGTAAAGTGCAGGAGTGGTaGCCCGAATCAGAGCTGGAC +
Preference number: 2 (lower is better)
Translates to: PVYLCGKSGNGLRVPGHGKVQEW*PESELD
Trigger: GTCCAGCTCTGATTCGGGTCACCACTCCTGCACTTT...ACCATGGCCAGGGACCCTCAGACCATTACCGCTCTTTCCACACAGATAAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR TCA 90 bp GATCCAGGGGTGACTTGGAATCGTGAGGAGATTTCTGAGAAGGGGGTGAGCGAGAGATCCCCTGTTCCTTaGCTGGGGAAACACATCCCA +
Preference number: 2 (lower is better)
Translates to: DPGVTWNREEISEKGVSERSPVP*LGKHIP
Trigger: TGGGATGTGTTTCCCCAGTCAAGGAACAGGGGATCT...CTCGCTCACCCCCTTCTCAGAAATCTCCTCACGATTCCAAGTCACCCCTGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR TCA 90 bp TGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCTGACCTAGCGCAATACTaGAAGTTTCCCCCACTTGCT +
Preference number: 2 (lower is better)
Translates to: CTRTPTFVIATSWSAGLPDLAQY*KFPPLA
Trigger: AGCAAGTGGGGGAAACTTTCAGTATTGCGCTAGGTC...AGGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp GTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCAGCCAGGATGGGGTGCCAAAGTaGAGGAGTGGTGACCCGAAT +
Preference number: 2 (lower is better)
Translates to: VRPMLASVLPHSQYSVSQDGVPK*RSGDPN
Trigger: ATTCGGGTCACCACTCCTGCACTTTGGCACCCCATC...CTGGCTGACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp CATGTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAAGTGCCCGTCAAAGTaGGAGGCCAGAACTAGGCTG +
Preference number: 2 (lower is better)
Translates to: HVCYKSRLDNPKNCEGSAKCPSK*EARTRL
Trigger: CAGCCTAGTTCTGGCCTCCCACTTTGACGGGCACTT...TGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CAA 90 bp CTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGTaGCCTCACTCACAGTACTCAGTCAGCCAGAGAAACCTACCTTCC +
Preference number: 2 (lower is better)
Translates to: LSLLPSQVRPMLASV*PHSQYSVSQRNLPS
Trigger: GGAAGGTAGGTTTCTCTGGCTGACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp GTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTGGGTCGATAGCTTCCGGACAGAGCTGGACCCAGTaGAAGGCCTCCCATTCCTTG +
Preference number: 2 (lower is better)
Translates to: VLVIRPLSGHVVGSIASGQSWTQ*KASHSL
Trigger: CAAGGAATGGGAGGCCTTTCACTGGGTCCAGCTCTG...TCCGGAAGCTATCGACCCAACAACATGTCCAGAAAGAGGCCTTATGACCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR TCA 90 bp CATGTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGATCCCCTGTTCCTTaGCTGGGGAAACACATCCCA +
Preference number: 2 (lower is better)
Translates to: HVCYKSRLDNPKNCEGSARSPVP*LGKHIP
Trigger: TGGGATGTGTTTCCCCAGTCAAGGAACAGGGGATCT...TGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp TGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGGACCTAGCGCAATACTaGAAGTTTCCCCCACTTGCT +
Preference number: 2 (lower is better)
Translates to: CTRPTEGFSPALSLDTYRDLAQY*KFPPLA
Trigger: AGCAAGTGGGGGAAACTTTCAGTATTGCGCTAGGTC...CCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp CCCTACCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGACACCAGCAAGCACTaGAGTCCTCACAAGTTACTT +
Preference number: 2 (lower is better)
Translates to: PYPSLSLLPSQVRPMLASDTSKH*SPHKLL
Trigger: AAGTAACTTGTGAGGACTTCAGTGCTTGCTGGTGTC...TGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGGTAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp GCTTGGAGTCATGATGGTGCCTGTCATAATAATCTCTGTGTCCCCGGTGGTCTCTGGAATGGGATGGGGTaGCAAAGTGCAGGAGTGGTG +
Preference number: 2 (lower is better)
Translates to: AWSHDGACHNNLCVPGGLWNGMG*QSAGVV
Trigger: CACCACTCCTGCACTTTGGCACCCCATCCCATTCCA...GAGACCACCGGGGACACAGAGATTATTATGACAGGCACCATCATGACTCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR GCA 90 bp ATTTCTGAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGGGTGCAATGGGGGTATTTGAGGGGTGTACCTaGTCCCCTTCAAGTCCTATG +
Preference number: 2 (lower is better)
Translates to: ISEKGVSEDLRLQGAMGVFEGCT*SPSSPM
Trigger: CATAGGACTTGAAGGGGAGCAGGTACACCCCTCAAA...TACCCCCATTGCACCCTGCAGTCTCAGATCCTCGCTCACCCCCTTCTCAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR GCA 90 bp CCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATCAGGCGCTTCAGATCTaGCACCGACTTATCTACCAG +
Preference number: 2 (lower is better)
Translates to: PALLTHSCCGSVHPGASDQALQI*HRLIYQ
Trigger: CTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCTG...ATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR CCA 90 bp TCAACAAGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGGCATCCCAGCCGTCGTaGATTTCCTCCTTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: STSNPLGSVAASPEAFYLASQPS*ISSFQE
Trigger: CTCCTGGAAGGAGGAAATCCACGACGGCTGGGATGC...CAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACTTGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629104.1
3UTR-3UTR TCA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCTGCAGCAGGAAGTGTTaGCCTAGCGCAATACTGAAA +
Preference number: 2 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASCSRKC*PSAILK
Trigger: TTTCAGTATTGCGCTAGGTCAACACTTCCTGCTGCA...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp AACACAAGCTTCCGGGACCCAGACCCTCATCTGGAAACCACACAGGCCAGCCCTAAGAGCCTGCTTAATTaGTGCAACCAAACTTGCTTC +
Preference number: 2 (lower is better)
Translates to: NTSFRDPDPHLETTQASPKSLLN*CNQTCF
Trigger: GAAGCAAGTTTGGTTGCATCAATTAAGCAGGCTCTT...AGGGCTGGCCTGTGTGGTTTCCAGATGAGGGTCTGGGTCCCGGAAGCTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp TGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCTTCTCCAGACCCTTTCTaGGCAGCTTCAACAAGTAAT +
Preference number: 2 (lower is better)
Translates to: CTRTPTFVIATSWSAGLPSPDPF*AASTSN
Trigger: ATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGA...AGGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR GCA 90 bp TATCAGCAACTCAAGAGAGAAGCCCTGATGACTGTGGAAACCCTGATGGAAATGCACACAGGCCAGCCCTaGGATGCTCTGTGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: YQQLKREALMTVETLMEMHTGQP*DALCSR
Trigger: CCTGCTACACAGAGCATCGCAGGGCTGGCCTGTGTG...CATTTCCATCAGGGTTTCCACAGTCATCAGGGCTTCTCTCTTGAGTTGCTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp CCTCACAAGTTACTTCAGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTTGGCCAGGTGGCTCATaGAGTCACCGGAGCTTTGCT +
Preference number: 2 (lower is better)
Translates to: PHKLLQEFNPAHAQQKGFWPGGS*SHRSFA
Trigger: AGCAAAGCTCCGGTGACTGCATGAGCCACCTGGCCA...AAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCTGAAGTAACTTGTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp AGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACAGGCGCTTCAGATCTaGCACCGACTTATCTACCAG +
Preference number: 2 (lower is better)
Translates to: SNPLGSVAASPEAFYLSPQALQI*HRLIYQ
Trigger: CTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCTG...TGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR CCA 90 bp CTGCTGGTGGTAATTTTGAGGCCTAAATTCATCGGATCTCCTCCGCTTGGAGTCAGGCCAGAACTAGGCTaGAATGGGATGGGGTGCCAA +
Preference number: 2 (lower is better)
Translates to: LLVVILRPKFIGSPPLGVRPELG*NGMGCQ
Trigger: TTGGCACCCCATCCCATTCCAGCCTAGTTCTGGCCT...GACTCCAAGCGGAGGAGATCCGATGAATTTAGGCCTCAAAATTACCACCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CCA 90 bp CAAGGCAATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTCCTTCCCTGGCACAGTaGGAAAAGGAGGCCCACTCA +
Preference number: 2 (lower is better)
Translates to: QGNHGLESVLSARSSICGPSLAQ*EKEAHS
Trigger: TGAGTGGGCCTCCTTTTCCCACTGTGCCAGGGAAGG...ACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp TATCAGCAACTCAAGAGAGAAGCCCTGATGACTGTGGAAACCCTGATGGAAATGAGGACTGTGGCCAGGTaGCTCATGCAGTCACCGGAG +
Preference number: 2 (lower is better)
Translates to: YQQLKREALMTVETLMEMRTVAR*LMQSPE
Trigger: CTCCGGTGACTGCATGAGCCACCTGGCCACAGTCCT...CATTTCCATCAGGGTTTCCACAGTCATCAGGGCTTCTCTCTTGAGTTGCTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGCCTTCCTCTTTGGCTTaGGCAAGGCAATCATGGGCT +
Preference number: 2 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVPSSLA*ARQSWA
Trigger: AGCCCATGATTGCCTTGCCCAAGCCAAAGAGGAAGG...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp TCTGAATGCCTAGGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCGACACACAGCTGTTGTaGATCAGTTCACCCAGGCGC +
Preference number: 2 (lower is better)
Translates to: SECLGDESSIPCSSFSLGDTQLL*ISSPRR
Trigger: GCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTC...GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCCTAGGCATTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
3UTR-3UTR CCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTGTAAGGACTGTGGGCTaGTACCCATCTCGGGATCCC +
Preference number: 2 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLVRTVG*YPSRDP
Trigger: GGGATCCCGAGATGGGTACCAGCCCACAGTCCTTAC...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR CAA 90 bp GGGGCGGTGATCAGACATTCGTCGGAAATCCTGCTGGTGGTAATTTaGAGGCCTAAATTCATCGGATCTCCTCCGCTTGGAGTCATGATG +
Preference number: 2 (lower is better)
Translates to: GAVIRHSSEILLVVI*RPKFIGSPPLGVMM
Trigger: CATCATGACTCCAAGCGGAGGAGATCCGATGAATTTAGGCCTCAAAATTACCACCAGCAGGATTTCCGACGAATGTCTGATCACCGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR CAA 90 bp TCTTTCAGCTGCTCTTCGTATTCCTGCATTGCTGACACACAGCTGTaGTGGATCAGTTCACCCAGGCGCTTCAGATCTGCCACCGACTTA +
Preference number: 2 (lower is better)
Translates to: SFSCSSYSCIADTQL*WISSPRRFRSATDL
Trigger: TAAGTCGGTGGCAGATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR CAA 90 bp TTCCCTCGCTGGCATTTTCTTTCAGCTGCTCTTCGTATTCCTGCATaGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCA +
Preference number: 2 (lower is better)
Translates to: FPRWHFLSAALRIPA*LTHSCCGSVHPGAS
Trigger: TGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTGAAAGAAAATGCCAGCGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR TCA 90 bp CAAGGCAATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTCCCAAGAACACATTTaGGGGGTGTACCTGCTCCCC +
Preference number: 2 (lower is better)
Translates to: QGNHGLESVLSARSSICGSQEHI*GVYLLP
Trigger: GGGGAGCAGGTACACCCCTCAAATGTGTTCTTGGGA...ACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATTGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGAAGAGCCTGCTTAATTaGTGCAACCAAACTTGCTTC +
Preference number: 2 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGKSLLN*CNQTCF
Trigger: GAAGCAAGTTTGGTTGCATCAATTAAGCAGGCTCTT...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp TGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGTCTCCTTACATATGCTaGATGTCTCCTGGTCCAGAT +
Preference number: 2 (lower is better)
Translates to: CTRPTEGFSPALSLDTYRSPYIC*MSPGPD
Trigger: ATCTGGACCAGGAGACATTCAGCATATGTAAGGAGA...CCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR TCA 90 bp CCCTGGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGTTAAAACCCATTCAATaGCCACTGGAGCTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: PWAPSCLYSQQHQSIIQGLKPIQ*PLELRD
Trigger: GTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAA...CCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR GCA 90 bp CAAGGCAATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTGCCCCGACCATaGACTAAGGTCCTGGGAACA +
Preference number: 2 (lower is better)
Translates to: QGNHGLESVLSARSSICGFLPRP*TKVLGT
Trigger: TGTTCCCAGGACCTTAGTGCATGGTCGGGGCAGGAA...ACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCAGCCTGTTCACTGCCTaGACCAGGACCCCCACCTTT +
Preference number: 2 (lower is better)
Translates to: NHGLESVLSARSSICGFLSLFTA*TRTPTF
Trigger: AAAGGTGGGGGTCCTGGTGCAGGCAGTGAACAGGCT...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp TATCAGCAACTCAAGAGAGAAGCCCTGATGACTGTGGAAACCCTGATGGAAATGAGCCTGTTCACTGCCTaGACCAGGACCCCCACCTTT +
Preference number: 2 (lower is better)
Translates to: YQQLKREALMTVETLMEMSLFTA*TRTPTF
Trigger: AAAGGTGGGGGTCCTGGTGCAGGCAGTGAACAGGCT...CATTTCCATCAGGGTTTCCACAGTCATCAGGGCTTCTCTCTTGAGTTGCTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCTGGGCAAGGCAATCATaGGCTAGAGTCAGTATTATC +
Preference number: 2 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASWARQS*ARVSII
Trigger: GATAATACTGACTCTAGCCCATGATTGCCTTGCCCA...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp GGTGCCTGTCATAATAATCTCTGTGTCCCCGGTGGTCTCGGTCACTGCTGTACTTTCTGGACATGTTGTTaGGTCGATAGCTTCCGGAAC +
Preference number: 2 (lower is better)
Translates to: GACHNNLCVPGGLGHCCTFWTCC*VDSFRN
Trigger: GTTCCGGAAGCTATCGACCCAACAACATGTCCAGAA...AGTACAGCAGTGACCGAGACCACCGGGGACACAGAGATTATTATGACAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR-3UTR CCA 90 bp AACTCCGGATATCTTGATTGTTGGACCTCTCCTTTTCCCTGGTCCTTTTCCCTCGACACACAGCTGTTGTaGATCAGTTCACCCAGGCGC +
Preference number: 2 (lower is better)
Translates to: NSGYLDCWTSPFPWSFSLDTQLL*ISSPRR
Trigger: GCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTC...GAGGGAAAAGGACCAGGGAAAAGGAGAGGTCCAACAATCAAGATATCCGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR CCA 90 bp GCAATACCCTGGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATAATTAGCTGGAAGTGGTaGTGCGTGCCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: AIPWAPSCLYSQQHQSIIISWKW*CVPVIP
Trigger: TGGGATTACAGGCACGCACCACCACTTCCAGCTAAT...TATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGGTATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR TCA 90 bp CCCCTTCTTCTCCAGACCCTTTCTGAGCAGCTTCAACAAGTAATCCGCTCGGGTTCTCCAGACCCTTTCTaGGCAGCTTCAACAAGTAAT +
Preference number: 2 (lower is better)
Translates to: PLLLQTLSEQLQQVIRSGSPDPF*AASTSN
Trigger: ATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGA...ACCCGAGCGGATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGAAGAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR TCA 90 bp CCCTGGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGCTGATATTTCATTACTaGGGACCCAAGCACATCAGT +
Preference number: 2 (lower is better)
Translates to: PWAPSCLYSQQHQSIIQGLIFHY*GPKHIS
Trigger: ACTGATGTGCTTGGGTCCTCAGTAATGAAATATCAG...CCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR GCA 90 bp ACCCTTGTTCACGTGCAGGTTTTAGGTGATGCTAACTCCCTCTTTCTCAACCTGGCTTCAGGACATGTGTaGTACAAGTCCAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: TLVHVQVLGDANSLFLNLASGHV*YKSRLD
Trigger: GTCCAGCCTGGACTTGTAGCACACATGTCCTGAAGC...CAGGTTGAGAAAGAGGGAGTTAGCATCACCTAAAACCTGCACGTGAACAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp AGTCAGTTATTCTGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTTCCCCTCGCCCAACGTaGCAGCCCTCAGAGGAGCCG +
Preference number: 2 (lower is better)
Translates to: SQLFCLHLERPLDTLNNTSPRPT*QPSEEP
Trigger: CGGCTCCTCTGAGGGCTGCCACGTTGGGCGAGGGGA...AGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACAGAATAACTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTATCAATTATGGGCTCGTaGCAGGTAAGGACTGTGGGC +
Preference number: 2 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLSIMGS*QVRTVG
Trigger: GCCCACAGTCCTTACCTGCCACGAGCCCATAATTGA...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CCA 90 bp TCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGCCAGATGCAGTTGTGCCTAAATGCAACTaGGCATGGTGGCTCACGCCT +
Preference number: 2 (lower is better)
Translates to: SCLYSQQHQSIIQGPDAVVPKCN*AWWLTP
Trigger: AGGCGTGAGCCACCATGCCCAGTTGCATTTAGGCAC...AACTGCATCTGGCCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR TCA 90 bp GTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCAGCCAGAGGAGACCAAAGCTCTaGAATGTACAAAGACAGTGT +
Preference number: 2 (lower is better)
Translates to: VRPMLASVLPHSQYSVSQRRPKL*NVQRQC
Trigger: ACACTGTCTTTGTACATTTCAGAGCTTTGGTCTCCT...CTGGCTGACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp GGTGCCTGTCATAATAATCTCTGTGTCCCCGGTGGTCTCGGTCACTGCTGTACTAGGAGACCAAAGCTCTaGAATGTACAAAGACAGTGT +
Preference number: 2 (lower is better)
Translates to: GACHNNLCVPGGLGHCCTRRPKL*NVQRQC
Trigger: ACACTGTCTTTGTACATTTCAGAGCTTTGGTCTCCT...AGTACAGCAGTGACCGAGACCACCGGGGACACAGAGATTATTATGACAGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR TCA 90 bp CTGAGCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCGGACCCCCACCTTTGTaGTTGCAACAAGTTGGTCAG +
Preference number: 2 (lower is better)
Translates to: LSLDTYRHTVCSSQLFCLGPPPL*LQQVGQ
Trigger: CTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCC...GAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGACCCTGAGATCGCTTTaGTTTACTCGAAGATTTGGC +
Preference number: 2 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVTLRSL*FTRRFG
Trigger: GCCAAATCTTCGAGTAAATCAAAGCGATCTCAGGGT...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR TCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTACTTTTCCTGCACAGGTaGAATGTGCTCCCTATGACC +
Preference number: 2 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLLFLHR*NVLPMT
Trigger: GGTCATAGGGAGCACATTTCACCTGTGCAGGAAAAG...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR GCA 90 bp CACAGGTACTTATTTCCATCTGCCCACCACATGATGTGTGATTCTGTCTACTCTGATGGGGTGCCAAAGTaGAGGAGTGGTGACCCGAAT +
Preference number: 2 (lower is better)
Translates to: HRYLFPSAHHMMCDSVYSDGVPK*RSGDPN
Trigger: ATTCGGGTCACCACTCCTGCACTTTGGCACCCCATC...AGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp CACAGGTACTTATTTCCATCTGCCCACCACATGATGTGTGATTCTGTCTACTCTTCTCTTGGGTGTCCATaGATCTGTGGGCCATGGGAG +
Preference number: 2 (lower is better)
Translates to: HRYLFPSAHHMMCDSVYSSLGCP*ICGPWE
Trigger: CTCCCATGGCCCACAGATGCATGGACACCCAAGAGA...AGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR GCA 90 bp TTCAGCTGCTCTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTCAGCATCACGTGCTATaGACTCCAGCTTTATCTCCC +
Preference number: 2 (lower is better)
Translates to: FSCSSYSCIADTQLLWISQHHVL*TPALSP
Trigger: GGGAGATAAAGCTGGAGTGCATAGCACGTGATGCTG...ACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637789.1
3UTR-3UTR GCA 90 bp GCTTCAACAAGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCAGCTCAGCATCACGTaGTATGCACTCCAGCTTTAT +
Preference number: 2 (lower is better)
Translates to: ASTSNPLGSVAASPEAFYQLSIT*YALQLY
Trigger: ATAAAGCTGGAGTGCATAGCACGTGATGCTGAGCTG...ATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACTTGTTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637789.1
3UTR-3UTR CCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCAGAACTAGGCTGGAATaGGATGGGGTGCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: NHGLESVLSARSSICGFLRTRLE*DGVPKC
Trigger: GCACTTTGGCACCCCATCCCATTCCAGCCTAGTTCT...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp GCTTCAACAAGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATTCCGCTTCTTTAATTTaGCCTCTTCCCCACCTGTCA +
Preference number: 2 (lower is better)
Translates to: ASTSNPLGSVAASPEAFYSASLI*PLPHLS
Trigger: TGACAGGTGGGGAAGAGGCCAAATTAAAGAAGCGGA...ATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACTTGTTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR CCA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGCATAAGGCCTCTTTCTaGACATGTTGTTGGGTCGAT +
Preference number: 2 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVHKASF*TCCWVD
Trigger: ATCGACCCAACAACATGTCCAGAAAGAGGCCTTATG...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CCA 90 bp GCAATACCCTGGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACCATTCAATGACCACTaGAGCTCAGAGACTTCTACA +
Preference number: 2 (lower is better)
Translates to: AIPWAPSCLYSQQHQSIIPFNDH*SSETST
Trigger: TGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGG...TATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGGTATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR CAA 90 bp GGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTaGTTTTCCTTCTTTACCCGAGGCTTCCGCTTCTTTAATTTGGCC +
Preference number: 2 (lower is better)
Translates to: GDESSIPCSSFSLGT*FSFFTRGFRFFNLA
Trigger: GGCCAAATTAAAGAAGCGGAAGCCTCGGGTAAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
3UTR CAA 90 bp AGTCAAAATACCCTTCGAGGTAGCCAAGACACACACACTTTGACCTaGATGTACTTGTCAACATCATTCCTCTTCTCCTCACCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: SQNTLRGSQDTHTLT*MYLSTSFLFSSPLG
Trigger: CCCCAGGGGTGAGGAGAAGAGGAATGATGTTGACAAGTACATCAAGGTCAAAGTGTGTGTGTCTTGGCTACCTCGAAGGGTATTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR TCA 90 bp CACAGGTACTTATTTCCATCTGCCCACCACATGATGTGTGATTCTGTCTACTCTGGACCCCCACCTTTGTaGTTGCAACAAGTTGGTCAG +
Preference number: 2 (lower is better)
Translates to: HRYLFPSAHHMMCDSVYSGPPPL*LQQVGQ
Trigger: CTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCC...AGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp TCTGAATGCCTAGGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCTCTCCAGACCCTTTCTaGGCAGCTTCAACAAGTAAT +
Preference number: 2 (lower is better)
Translates to: SECLGDESSIPCSSFSLGSPDPF*AASTSN
Trigger: ATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGA...GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCCTAGGCATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
3UTR-3UTR TCA 90 bp GCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCACTGGAGCTGGTGGGTGGATCATTTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: AVQQPQLPLKTHSMTTGAGGWII*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAATGATCCACCCACC...AGCTCCAGTGGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR GCA 90 bp CAAGGCAATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTGACAGGTTCACTTCCTaGTGTAATATGGACAGGACC +
Preference number: 2 (lower is better)
Translates to: QGNHGLESVLSARSSICGDRFTS*CNMDRT
Trigger: GGTCCTGTCCATATTACAGCAGGAAGTGAACCTGTC...ACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR GCA 90 bp AACTCCGGATATCTTGATTGTTGGACCTCTCCTTTTCCCTGGTCCTTTTCCCTCTGCTCTTCGTATTCCTaGATTGCTGACACACAGCTG +
Preference number: 2 (lower is better)
Translates to: NSGYLDCWTSPFPWSFSLCSSYS*IADTQL
Trigger: CAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCA...GAGGGAAAAGGACCAGGGAAAAGGAGAGGTCCAACAATCAAGATATCCGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR CCA 90 bp ATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCTCACCCAGACCCTCATCTaGAAACCACACAGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: ISTNNEIFQSQTPGNTILTQTLI*KPHRPA
Trigger: GGCTGGCCTGTGTGGTTTCCAGATGAGGGTCTGGGT...GAGGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCATCATCGTACTACTGGTaGCATTGTACTGAAGTAAAG +
Preference number: 2 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPSSYYW*HCTEVK
Trigger: CTTTACTTCAGTACAATGCCACCAGTAGTACGATGA...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CCA 90 bp CCTCACCCCTGGGGTCTAGTAGTTCTCCTATTGAACTATAAGAATCTTTCTCTTAGGAGGGCAATACCCTaGGCCCCCTCTTGTCTGTAT +
Preference number: 2 (lower is better)
Translates to: PHPWGLVVLLLNYKNLSLRRAIP*APSCLY
Trigger: ATACAGACAAGAGGGGGCCCAGGGTATTGCCCTCCT...AAGAGAAAGATTCTTATAGTTCAATAGGAGAACTACTAGACCCCAGGGGTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR TCA 90 bp GCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCATCCATCTGCCCACCACATaGTGTGTGATTCTGTCTACT +
Preference number: 2 (lower is better)
Translates to: AWTLTGTLYVQVSYSVSIHLPTT*CVILST
Trigger: AGTAGACAGAATCACACATCATGTGGTGGGCAGATG...GATGGAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp CAAGGCAATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTATATGGACAGGACCCTaGGATCGCTTTGATTTACTC +
Preference number: 2 (lower is better)
Translates to: QGNHGLESVLSARSSICGIWTGP*DRFDLL
Trigger: GAGTAAATCAAAGCGATCTCAGGGTCCTGTCCATAT...ACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATTGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR TCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCACAGGCAAAAGGAAAGTaGCATCAAATAGAAATACAG +
Preference number: 2 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPQAKGK*HQIEIQ
Trigger: CTGTATTTCTATTTGATGTCACTTTCCTTTTGCCTG...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR TCA 90 bp GCAATACCCTGGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACTAGTGCCATTAACATaGATGTCAACTTCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: AIPWAPSCLYSQQHQSIILVPLT*MSTSQR
Trigger: TCTCTGAGAAGTTGACATTCATGTTAATGGCACTAG...TATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGGTATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR GCA 90 bp ATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCTCTGGAATGGGATGGGGTaGCAAAGTGCAGGAGTGGTG +
Preference number: 2 (lower is better)
Translates to: ISTNNEIFQSQTPGNTILWNGMG*QSAGVV
Trigger: CACCACTCCTGCACTTTGGCACCCCATCCCATTCCA...GAGGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp ATGTACAAAGACAGTGTGGGAAAAATTAGTGTTGGCAGAGATGAAGCAGTTGTGTTCCTGCCCCGACCATaGACTAAGGTCCTGGGAACA +
Preference number: 2 (lower is better)
Translates to: MYKDSVGKISVGRDEAVVFLPRP*TKVLGT
Trigger: TGTTCCCAGGACCTTAGTGCATGGTCGGGGCAGGAA...CACAACTGCTTCATCTCTGCCAACACTAATTTTTCCCACACTGTCTTTGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCAAGGGAAAACCAAAGCTaGTATGAGGTTAAATTATCC +
Preference number: 2 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPRENQS*YEVKLS
Trigger: GGATAATTTAACCTCATAGCAGCTTTGGTTTTCCCT...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CCA 90 bp ATCTGGCCGATACTGCCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAGATGAAGCAGTTGTaGAAGCTGTTGCCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: IWPILPFATSYGTESPKCEMKQL*KLLPSL
Trigger: GAGAGAGGGCAACAGCTTCCACAACTGCTTCATCTC...ACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGGCAGTATCGGCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp TGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTGGCAATCTATACACTGTGTGGCCTAAGTaGAGACACAGGCCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: CLHLERPLDTLNNTGNLYTVWPK*RHRPCP
Trigger: AGGGCAGGGCCTGTGTCTCCACTTAGGCCACACAGT...GTATAGATTGCCAGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp TGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTGGCAATCTATACAAAGTGCAGGAGTGGTaGCCCGAATCAGAGCTGGAC +
Preference number: 2 (lower is better)
Translates to: CLHLERPLDTLNNTGNLYKVQEW*PESELD
Trigger: GTCCAGCTCTGATTCGGGTCACCACTCCTGCACTTT...GTATAGATTGCCAGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACCCATCTCGGGATCCCTaGTACCTAGTGTGGCTGACA +
Preference number: 2 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHPSRDP*YLVWLT
Trigger: TGTCAGCCACACTAGGTATCAGGGATCCCGAGATGG...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR GCA 90 bp AATTTTAGAATCAATGTAACACTGATCTGGCCGATACTGCCTTTTGCTACTTCACACTACCCAACTCTCTaGAGGGGCTCACCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: NFRINVTLIWPILPFATSHYPTL*RGSPPS
Trigger: GGAAGGAGGTGAGCCCCTGCAGAGAGTTGGGTAGTG...TGAAGTAGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATTGATTCTAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp ACCCTTGTTCACGTGCAGGTTTTAGGTGATGCTAACTCCCTCTTTCTCAACCTGAATGTAACACTGATCTaGCCGATACTGCCTTTTGCT +
Preference number: 2 (lower is better)
Translates to: TLVHVQVLGDANSLFLNLNVTLI*PILPFA
Trigger: AGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATT...CAGGTTGAGAAAGAGGGAGTTAGCATCACCTAAAACCTGCACGTGAACAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp AGTTTCCATAGCCATGTTCATAAATCCCCAGCAACAGGCGAGAATCATCTTCCAGAACTCCGGATATCTTaGTTGTTGGACCTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: SFHSHVHKSPATGENHLPELRIS*LLDLSF
Trigger: AAAGGAGAGGTCCAACAATCAAGATATCCGGAGTTC...TGGAAGATGATTCTCGCCTGTTGCTGGGGATTTATGAACATGGCTATGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR TCA 90 bp GCTTCAACAAGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATGATTTCACATTAACCTaGACTCCGGATATCTTGATT +
Preference number: 2 (lower is better)
Translates to: ASTSNPLGSVAASPEAFYDFTLT*TPDILI
Trigger: AATCAAGATATCCGGAGTTCAGGTTAATGTGAAATC...ATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACTTGTTGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR TCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACGGGATTCGCTGTGGCTaGCACATGCATGATGAGATC +
Preference number: 2 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHGIRCG*HMHDEI
Trigger: GATCTCATCATGCATGTGTCAGCCACAGCGAATCCC...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR TCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTAGAAATGTGCTCCCTATaGCCCACAAAACAAAACATA +
Preference number: 2 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLEMCSL*PTKQNI
Trigger: TATGTTTTGTTTTGTGGGTCATAGGGAGCACATTTC...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR GCA 90 bp AACTCCGGATATCTTGATTGTTGGACCTCTCCTTTTCCCTGGTCCTTTTCCCTCGCATTTTCTTTCAGCTaGTCTTCGTATTCCTGCATT +
Preference number: 2 (lower is better)
Translates to: NSGYLDCWTSPFPWSFSLAFSFS*SSYSCI
Trigger: AATGCAGGAATACGAAGAGCAGCTGAAAGAAAATGC...GAGGGAAAAGGACCAGGGAAAAGGAGAGGTCCAACAATCAAGATATCCGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR GCA 90 bp ACTCCCAGTTTCCATAGCCATGTTCATAAATCCCCAGCAACAGGCGAGAATCATCTCTACATCAAAATGTaGAGCTTTGACACGACAGGT +
Preference number: 2 (lower is better)
Translates to: TPSFHSHVHKSPATGENHLYIKM*SFDTTG
Trigger: ACCTGTCGTGTCAAAGCTGCACATTTTGATGTAGAG...ATGATTCTCGCCTGTTGCTGGGGATTTATGAACATGGCTATGGAAACTGGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR CCA 90 bp CCTCACAAGTTACTTCAGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTCTGACAAGTGGATTTTaGTCTGTAGGATTTCAGTGT +
Preference number: 2 (lower is better)
Translates to: PHKLLQEFNPAHAQQKGFLTSGF*SVGFQC
Trigger: ACACTGAAATCCTACAGACCAAAATCCACTTGTCAG...AAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCTGAAGTAACTTGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAGACAATAGAGAAGGGTaGGAGCGAGGGGCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: SISELEEVAIETIHSETEDNREG*ERGAVS
Trigger: GGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTC...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR TCA 90 bp ATCTGGCCGATACTGCCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTTATCCACGTGTTTGGTaGCTCTTACTCTCTCCTTTA +
Preference number: 2 (lower is better)
Translates to: IWPILPFATSYGTESPKCYPRVW*LLLSPL
Trigger: TAAAGGAGAGAGTAAGAGTCACCAAACACGTGGATA...ACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGGCAGTATCGGCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACAAGGTACAGTGCAAATaGCGCACATCATCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHKVQCK*RTSSAQ
Trigger: CTGGGCTGATGATGTGCGTCATTTGCACTGTACCTT...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CCA 90 bp CCTCACCCCTGGGGTCTAGTAGTTCTCCTATTGAACTATAAGAATCTTTCTCTTAAAATTAGCTGGAAGTaGTGGTGCGTGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: PHPWGLVVLLLNYKNLSLKISWK*WCVPVI
Trigger: GATTACAGGCACGCACCACCACTTCCAGCTAATTTT...AAGAGAAAGATTCTTATAGTTCAATAGGAGAACTACTAGACCCCAGGGGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR CCA 90 bp GCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCACTGGAGCTGTGAGCCACTGCAACTaGCTTCACTTCTCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: AVQQPQLPLKTHSMTTGAVSHCN*LHFSFK
Trigger: TTTAAAAGAGAAGTGAAGCCAGTTGCAGTGGCTCAC...AGCTCCAGTGGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR TCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTCATCTGCCCACCACATaGTGTGTGATTCTGTCTACT +
Preference number: 2 (lower is better)
Translates to: PFATSYGTESPKCEQKEVHLPTT*CVILST
Trigger: AGTAGACAGAATCACACATCATGTGGTGGGCAGATG...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTACTGTGTTTGCACCGTaGGGACTGATGCAACTTTCA +
Preference number: 2 (lower is better)
Translates to: PFATSYGTESPKCEQKEVTVFAP*GLMQLS
Trigger: TGAAAGTTGCATCAGTCCTCACGGTGCAAACACAGT...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR GCA 90 bp AGTCAGTTATTCTGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTGAAAGCTCAATTCCATaGTCCTCTTTCAGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: SQLFCLHLERPLDTLNNTESSIP*SSFSLG
Trigger: GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTC...AGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACAGAATAACTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CCA 90 bp AATTTTAGAATCAATGTAACACTGATCTGGCCGATACTGCCTTTTGCTACTTCAGAGATGAAGCAGTTGTaGAAGCTGTTGCCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: NFRINVTLIWPILPFATSEMKQL*KLLPSL
Trigger: GAGAGAGGGCAACAGCTTCCACAACTGCTTCATCTC...TGAAGTAGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATTGATTCTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp TGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTGGCAATCTATACTCCGCTTCTTTAATTTaGCCTCTTCCCCACCTGTCA +
Preference number: 2 (lower is better)
Translates to: CLHLERPLDTLNNTGNLYSASLI*PLPHLS
Trigger: TGACAGGTGGGGAAGAGGCCAAATTAAAGAAGCGGA...GTATAGATTGCCAGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CCA 90 bp CCTCACCCCTGGGGTCTAGTAGTTCTCCTATTGAACTATAAGAATCTTTCTCTTCAGAGACTTCTACATTaGTGCTTCTCTGACCACATT +
Preference number: 2 (lower is better)
Translates to: PHPWGLVVLLLNYKNLSLQRLLH*CFSDHI
Trigger: AATGTGGTCAGAGAAGCACCAATGTAGAAGTCTCTG...AAGAGAAAGATTCTTATAGTTCAATAGGAGAACTACTAGACCCCAGGGGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR GCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAAGCTCTCCCTGGACTTaGTACTCTCACAATGTAAAG +
Preference number: 2 (lower is better)
Translates to: TNTERVYHQQKKSFRQKESSPWT*YSHNVK
Trigger: CTTTACATTGTGAGAGTAGCAAGTCCAGGGAGAGCT...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACCTCTTTAGCTCTCCCTaGACTTGCTACTCTCACAAT +
Preference number: 2 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHLFSSP*TCYSHN
Trigger: ATTGTGAGAGTAGCAAGTCCAGGGAGAGCTAAAGAG...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CCA 90 bp GGGCCAGATGCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCCCCTATCACACTCTTTaGCAATTAAATACTGGTTTT +
Preference number: 2 (lower is better)
Translates to: GPDAVQQPQLPLKTHSMTPYHTL*QLNTGF
Trigger: AAAACCAGTATTTAATTGCCAAAGAGTGTGATAGGG...GGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGCATCTGGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR CAA 90 bp GTCCACAGGGATAGATTTATGCAGCATCTCAAACTCCTCTTCATGTaGGATAATGGATTTCACATTAACCTGAACTCCGGATATCTTGAT +
Preference number: 2 (lower is better)
Translates to: VHRDRFMQHLKLLFM*DNGFHINLNSGYLD
Trigger: ATCAAGATATCCGGAGTTCAGGTTAATGTGAAATCCATTATCCAACATGAAGAGGAGTTTGAGATGCTGCATAAATCTATCCCTGTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR-3UTR TCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAAGCTTCAGAAGACTTTaGCTCTTCAATTATGGGCTC +
Preference number: 2 (lower is better)
Translates to: TNTERVYHQQKKSFRQKESFRRL*LFNYGL
Trigger: GAGCCCATAATTGAAGAGTCAAAGTCTTCTGAAGCT...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR TCA 90 bp CCTCACCCCTGGGGTCTAGTAGTTCTCCTATTGAACTATAAGAATCTTTCTCTTAAGTCAGCAAAGCCATaGAATAATTCATTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: PHPWGLVVLLLNYKNLSLKSAKP*NNSFSP
Trigger: AGGAGAGAATGAATTATTTCATGGCTTTGCTGACTT...AAGAGAAAGATTCTTATAGTTCAATAGGAGAACTACTAGACCCCAGGGGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR TCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTTCCATCATGTCAGAGTaGACCAAATCAACCAAATCA +
Preference number: 2 (lower is better)
Translates to: PFATSYGTESPKCEQKEVSIMSE*TKSTKS
Trigger: TGATTTGGTTGATTTGGTTCACTCTGACATGATGGA...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR TCA 90 bp AATTTTAGAATCAATGTAACACTGATCTGGCCGATACTGCCTTTTGCTACTTCACCACCACATGATGTGTaGTTCTGTCTACTCTATTTC +
Preference number: 2 (lower is better)
Translates to: NFRINVTLIWPILPFATSPPHDV*FCLLYF
Trigger: GAAATAGAGTAGACAGAATCACACATCATGTGGTGG...TGAAGTAGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATTGATTCTAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp AATTTTAGAATCAATGTAACACTGATCTGGCCGATACTGCCTTTTGCTACTTCAAAGTCACTGTGTCTTTaGATGCTCCTTGTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: NFRINVTLIWPILPFATSKSLCL*MLLVWE
Trigger: TTCCCAAACAAGGAGCATCCAAAGACACAGTGACTT...TGAAGTAGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATTGATTCTAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CCA 90 bp CTTAGAGGCTTTATTACTTCATCACTAACAAGGTACTCCAAGGAATGTGAAACAGCCTTGTATGTAAAATaGTGCAATGCAGCAATGGCT +
Preference number: 2 (lower is better)
Translates to: LRGFITSSLTRYSKECETALYVK*CNAAMA
Trigger: AGCCATTGCTGCATTGCACCATTTTACATACAAGGC...TGTTTCACATTCCTTGGAGTACCTTGTTAGTGATGAAGTAATAAAGCCTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627622.1
3UTR-3UTR CCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAGGCTCATCGTACTACTaGTGGCATTGTACTGAAGTA +
Preference number: 2 (lower is better)
Translates to: SISELEEVAIETIHSETEGSSYY*WHCTEV
Trigger: TACTTCAGTACAATGCCACCAGTAGTACGATGAGCC...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR TCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAAATACAAGTGAGCTGTaGGACAACTTCAAGCAAGCT +
Preference number: 2 (lower is better)
Translates to: SISELEEVAIETIHSETENTSEL*DNFKQA
Trigger: AGCTTGCTTGAAGTTGTCTCACAGCTCACTTGTATT...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR GCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAAGAAAACTCTTTTCCTaGACAGGTGAAATGTGCTCC +
Preference number: 2 (lower is better)
Translates to: SISELEEVAIETIHSETERKLFS*TGEMCS
Trigger: GGAGCACATTTCACCTGTGCAGGAAAAGAGTTTTCT...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CCA 90 bp CTTAGAGGCTTTATTACTTCATCACTAACAAGGTACTCCAAGGAATGTGAAACATACAAGGCTTCTCTATaGCCCTCAGTTACAAGTTTA +
Preference number: 2 (lower is better)
Translates to: LRGFITSSLTRYSKECETYKASL*PSVTSL
Trigger: TAAACTTGTAACTGAGGGCCATAGAGAAGCCTTGTA...TGTTTCACATTCCTTGGAGTACCTTGTTAGTGATGAAGTAATAAAGCCTCTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627622.1
3UTR CAA 90 bp TTCTCTTTCTTATCTTTTGACTTCTTTCTTTCCTTGTCCCCTTCTTaGTCTTTCCTAGAACTCATTTGTTTCTCCTTGTTCTCCTTGTTC +
Preference number: 2 (lower is better)
Translates to: FSFLSFDFFLSLSPS*SFLELICFSLFSLF
Trigger: GAACAAGGAGAACAAGGAGAAACAAATGAGTTCTAGGAAAGACAAAGAAGGGGACAAGGAAAGAAAGAAGTCAAAAGATAAGAAAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000629104.1
3UTR-3UTR GCA 90 bp AAGCTTCAGAAGATAAAGCATTCCAGACGACTCTGTCGAAATACATCAATAAATTTGTATGTAAAATGGTaGAATGCAGCAATGGCTAAA +
Preference number: 2 (lower is better)
Translates to: KLQKIKHSRRLCRNTSINLYVKW*NAAMAK
Trigger: TTTAGCCATTGCTGCATTGCACCATTTTACATACAA...ATTTATTGATGTATTTCGACAGAGTCGTCTGGAATGCTTTATCTTCTGAAGCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627622.1
3UTR CCA 72 bp AGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTaGCAGCCCTCAGAGGAGCCGGAAGACCGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: SLDPWHGSPRPT*QPSEEPEDRWC
Trigger: GCACCAGCGGTCTTCCGGCTCCTCTGAGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp CTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATaGGAGGACTGTGGCCAGGTGGCTCATGCAGTCACC +
Preference number: 3 (lower is better)
Translates to: LPSPLSVTAGPP*EDCGQVAHAVT
Trigger: GGTGACTGCATGAGCCACCTGGCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp GGCACAGATGGCCTAAAGCAGCCTGGACCCTTGGCATaGCTCCCCTCGCCCAACGTGGCAGCCCTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: GTDGLKQPGPLA*LPSPNVAALRG
Trigger: TCCTCTGAGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCATCTGTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp ACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTaGCCAGGTGGCTCATGCAGTCACCGGAGCTTTGCT +
Preference number: 3 (lower is better)
Translates to: TERHGRPSMGGL*PGGSCSHRSFA
Trigger: AGCAAAGCTCCGGTGACTGCATGAGCCACCTGGCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp CCCTCAGAGGAGCCGGAAGACCGCTGGTGCTGGGCCTaGGCTGCTGCTCCTGCTGACAAGTGGATTTTGGTC +
Preference number: 3 (lower is better)
Translates to: PSEEPEDRWCWA*AAAPADKWILV
Trigger: GACCAAAATCCACTTGTCAGCAGGAGCAGCAGCCCAGGCCCAGCACCAGCGGTCTTCCGGCTCCTCTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCAGCTGTTCTTGCACGTaGAGCCCCTTGTCAGGTTTG +
Preference number: 3 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGSCSCT*SPLSGL
Trigger: CAAACCTGACAAGGGGCTCAACGTGCAAGAACAGCT...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CAA 90 bp TGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTTCAGCCAGTGAGTaGACAGCAGCAGCATGTCCA +
Preference number: 3 (lower is better)
Translates to: WPKAAWTLGMAPLAQRGSPSASE*TAAACP
Trigger: TGGACATGCTGCTGCTGTCAACTCACTGGCTGAAGG...GCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGATGCTGGCATCAGTGTaGCCTCACTCACAGTACTCA +
Preference number: 3 (lower is better)
Translates to: GPALSTERHGRPSMGGLWMLASV*PHSQYS
Trigger: TGAGTACTGTGAGTGAGGCAACACTGATGCCAGCAT...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp GATGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCAGTCACCGGAGCTTaGCTTCAGGACATGTGTGCT +
Preference number: 3 (lower is better)
Translates to: DGLKQPGPLAWLPSPNVAAVTGA*LQDMCA
Trigger: AGCACACATGTCCTGAAGCAAAGCTCCGGTGACTGC...TGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 72 bp CCAGCAGCCTCCATGCACCAGTTCCTGCCCCGACCATaGACTAAGGTCCTGGGAACACTGACCCTGGCAAGA +
Preference number: 3 (lower is better)
Translates to: PAASMHQFLPRP*TKVLGTLTLAR
Trigger: TCTTGCCAGGGTCAGTGTTCCCAGGACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 72 bp CCCAGACCCTCATCTGGAAACCACACAGGCCAGCCCTaGGATGCTCTGTGTAGCAGGGAGCAAGGGTCACAC +
Preference number: 3 (lower is better)
Translates to: PRPSSGNHTGQP*DALCSREQGSH
Trigger: GTGTGACCCTTGCTCCCTGCTACACAGAGCATCGCAGGGCTGGCCTGTGTGGTTTCCAGATGAGGGTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 72 bp AGGCCCTCCATGGGAGGACTGTGGCCAGGTGGCTCATaGAGTCACCGGAGCTTTGCTTCAGGACATGTGTGC +
Preference number: 3 (lower is better)
Translates to: RPSMGGLWPGGS*SHRSFASGHVC
Trigger: GCACACATGTCCTGAAGCAAAGCTCCGGTGACTGCATGAGCCACCTGGCCACAGTCCTCCCATGGAGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp AGAAGGGTGGGAGCGAGGGGCAGTCTCCCAACGAGGTaGCAGCTACTCAGCTACAGCTCTCTGCTAATGCGG +
Preference number: 3 (lower is better)
Translates to: RRVGARGSLPTR*QLLSYSSLLMR
Trigger: CCGCATTAGCAGAGAGCTGTAGCTGAGTAGCTGCCACCTCGTTGGGAGACTGCCCCTCGCTCCCACCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CAA 90 bp CTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACCTTGTCCCCACCCGCTaGCCCCAACTCGCCACTCCC +
Preference number: 3 (lower is better)
Translates to: LPSQVRPMLASVLPHSQYLVPTR*PQLATP
Trigger: GGGAGTGGCGAGTTGGGGCAAGCGGGTGGGGACAAG...GTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTACTTGACTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 72 bp GCTGGAATGGGATGGGGTGCCAAAGTGCAGGAGTGGTaGCCCGAATCAGAGCTGGACCCAGTGAAAGGCCTC +
Preference number: 3 (lower is better)
Translates to: AGMGWGAKVQEW*PESELDPVKGL
Trigger: GAGGCCTTTCACTGGGTCCAGCTCTGATTCGGGTCACCACTCCTGCACTTTGGCACCCCATCCCATTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 72 bp AGAACTGTGAGGGTTCAGCAAGCGGGGTGGGTCCACTaGGCTCTCAACACAAGCTTCCGGGACCCAGACCCT +
Preference number: 3 (lower is better)
Translates to: RTVRVQQAGWVH*ALNTSFRDPDP
Trigger: AGGGTCTGGGTCCCGGAAGCTTGTGTTGAGAGCTCAGTGGACCCACCCCGCTTGCTGAACCCTCACAGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 72 bp GTGTTTGGGCTTCCCTTCGAAGGGCTGAGGAATGACTaGAAGGAGAGTGAGCCCCGGGCTCTGCTGGCACCT +
Preference number: 3 (lower is better)
Translates to: VFGLPFEGLRND*KESEPRALLAP
Trigger: AGGTGCCAGCAGAGCCCGGGGCTCACTCTCCTTTCAGTCATTCCTCAGCCCTTCGAAGGGAAGCCCAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 72 bp GCCAGAACTAGGCTGGAATGGGATGGGGTGCCAAAGTaGAGGAGTGGTGACCCGAATCAGAGCTGGACCCAG +
Preference number: 3 (lower is better)
Translates to: ARTRLEWDGVPK*RSGDPNQSWTQ
Trigger: CTGGGTCCAGCTCTGATTCGGGTCACCACTCCTGCACTTTGGCACCCCATCCCATTCCAGCCTAGTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp CCAAGTGCCCGTCAAAGTGGGAGGCCAGAACTAGGCTaGAATGGGATGGGGTGCCAAAGTGCAGGAGTGGTG +
Preference number: 3 (lower is better)
Translates to: PSARQSGRPELG*NGMGCQSAGVV
Trigger: CACCACTCCTGCACTTTGGCACCCCATCCCATTCCAGCCTAGTTCTGGCCTCCCACTTTGACGGGCACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp CAGGTCCCAGCAGCCTCCATGCACCAGTTCCTGCCCCGACCATGCACTAAGGTCTTCGGGGGATCCAACTaGGCATGTCTTGGTAAAGGC +
Preference number: 3 (lower is better)
Translates to: QVPAASMHQFLPRPCTKVFGGSN*ACLGKG
Trigger: GCCTTTACCAAGACATGCCAAGTTGGATCCCCCGAA...GACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 72 bp GTAAGGACTGTGGGCTGGTACCCATCTCGGGATCCCTaGTACCTAGTGTGGCTGACAGCCTCGCACAGAGCT +
Preference number: 3 (lower is better)
Translates to: VRTVGWYPSRDP*YLVWLTASHRA
Trigger: AGCTCTGTGCGAGGCTGTCAGCCACACTAGGTATCAGGGATCCCGAGATGGGTACCAGCCCACAGTCCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR GCA 72 bp AATCACACACTGTTCACCAGGTCCCAGCAGCCTCCATaGACCAGTTCCTGCCCCGACCATGCACTAAGGTCC +
Preference number: 3 (lower is better)
Translates to: NHTLFTRSQQPP*TSSCPDHALRS
Trigger: GGACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTGGTGAACAGTGTGTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp ACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCCTaGCCACACTACTCCCCACCTACCCCACCCTACCCC +
Preference number: 3 (lower is better)
Translates to: TGIRNPPGIPVP*PHYSPPTPPYP
Trigger: GGGGTAGGGTGGGGTAGGTGGGGAGTAGTGTGGCCAGGGAACTGGAATCCCTGGTGGATTTCTGATTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp CCCTACCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAAAGGCCTCCCATTCCTaGAAGTGCTCCTTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: PYPSLSLLPSQVRPMLASKASHS*KCSFSQ
Trigger: CTGGCTGAAGGAGCACTTCAAGGAATGGGAGGCCTT...TGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGGTAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp CCCCATCTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGGAAAGTTTCCCCCACTaGCTGGCACTACTGAACCCC +
Preference number: 3 (lower is better)
Translates to: PHLPTLKGSTSQPNLPLWESFPH*LALLNP
Trigger: GGGGTTCAGTAGTGCCAGCAAGTGGGGGAAACTTTC...CCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAGATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp CACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGCACAGCGTGCAAAGTGTTaGGGCTTCCCTTCGAAGGGC +
Preference number: 3 (lower is better)
Translates to: HTPNRRVFTSSEPGHLQAQRAKC*GFPSKG
Trigger: GCCCTTCGAAGGGAAGCCCAAACACTTTGCACGCTG...TGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 72 bp TGCAGGAGTGGTGACCCGAATCAGAGCTGGACCCAGTaGAAGGCCTCCCATTCCTTGAAGTGCTCCTTCAGC +
Preference number: 3 (lower is better)
Translates to: CRSGDPNQSWTQ*KASHSLKCSFS
Trigger: GCTGAAGGAGCACTTCAAGGAATGGGAGGCCTTTCACTGGGTCCAGCTCTGATTCGGGTCACCACTCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 72 bp GAAGCTGGTACACACACAGTCAGCTCCTCCTCCAAGTaGCCGTCAAAGTGGGAGGCCAGAACTAGGCTGGAA +
Preference number: 3 (lower is better)
Translates to: EAGTHTVSSSSK*PSKWEARTRLE
Trigger: TTCCAGCCTAGTTCTGGCCTCCCACTTTGACGGGCACTTGGAGGAGGAGCTGACTGTGTGTGTACCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 72 bp ACTGTGGCCAGGTGGCTCATGCAGTCACCGGAGCTTTaGTTCAGGACATGTGTGCTACAAGTCCAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: TVARWLMQSPEL*FRTCVLQVQAG
Trigger: TCCAGCCTGGACTTGTAGCACACATGTCCTGAAGCAAAGCTCCGGTGACTGCATGAGCCACCTGGCCACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp CACAGTACTCAGTCAGCCAGAGAAACCTACCTTCCCTaGCACAGTGGGAAAAGGAGGCCCACTCAGGAGACC +
Preference number: 3 (lower is better)
Translates to: HSTQSARETYLP*HSGKRRPTQET
Trigger: GGTCTCCTGAGTGGGCCTCCTTTTCCCACTGTGCCAGGGAAGGTAGGTTTCTCTGGCTGACTGAGTACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp CCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGTTTGCACGTTGAGCCCCTaGTCAGGTTTGTCGAGCTGT +
Preference number: 3 (lower is better)
Translates to: PLTQPTPQSSKTHAGISVCTLSP*SGLSSC
Trigger: ACAGCTCGACAAACCTGACAAGGGGCTCAACGTGCA...AACACTGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR TCA 72 bp GGCAGTTCCGGGTGTGTTCCAGCTGTTCTTGCACGTTaGGCCCCTTGTCAGGTTTGTCGAGCTGTTTCAGTG +
Preference number: 3 (lower is better)
Translates to: GSSGCVPAVLAR*APCQVCRAVSV
Trigger: CACTGAAACAGCTCGACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGCTGGAACACACCCGGAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR GCA 72 bp TGTAGCAGGGAGCAAGGGTCACACCACAGCCACATCTaGTTCATTCGGGGGATCCAACTTGGCATGTCTTGG +
Preference number: 3 (lower is better)
Translates to: CSREQGSHHSHI*FIRGIQLGMSW
Trigger: CCAAGACATGCCAAGTTGGATCCCCCGAATGAAGCAGATGTGGCTGTGGTGTGACCCTTGCTCCCTGCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 72 bp TTCAGCAGGCAGTTCCGGGTGTGTTCCAGCTGTTCTTaGACGTTGAGCCCCTTGTCAGGTTTGTCGAGCTGT +
Preference number: 3 (lower is better)
Translates to: FSRQFRVCSSCS*TLSPLSGLSSC
Trigger: ACAGCTCGACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGCTGGAACACACCCGGAACTGCCTGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR GCA 72 bp GCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATCTaGCACCGACTTATCTACCAGCTCAGCATCACGTGC +
Preference number: 3 (lower is better)
Translates to: AVVDQFTQALQI*HRLIYQLSITC
Trigger: GCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCTGGGTGAACTGATCCACAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR CCA 72 bp TCAGTCAGCCAGAGAAACCTACCTTCCCTGGCACAGTaGGAAAAGGAGGCCCACTCAGGAGACCAAAGCTCT +
Preference number: 3 (lower is better)
Translates to: SVSQRNLPSLAQ*EKEAHSGDQSS
Trigger: AGAGCTTTGGTCTCCTGAGTGGGCCTCCTTTTCCCACTGTGCCAGGGAAGGTAGGTTTCTCTGGCTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp TCTGGACATGTTGTTGGGTCGATAGCTTCCGGAACGGTGGGCATCCATATGTCGCCTTCAGCCAGTGAGTaGACAGCAGCAGCATGTCCA +
Preference number: 3 (lower is better)
Translates to: SGHVVGSIASGTVGIHMSPSASE*TAAACP
Trigger: TGGACATGCTGCTGCTGTCAACTCACTGGCTGAAGG...CGACATATGGATGCCCACCGTTCCGGAAGCTATCGACCCAACAACATGTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CAA 90 bp AGTCAAGTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCCTTCAAGTCCTATGCTaGTCCCCACCCGCTTGCCCC +
Preference number: 3 (lower is better)
Translates to: SQVRPMLASVLPHSQYSVLQVLC*SPPACP
Trigger: GGGGCAAGCGGGTGGGGACAAGCATAGGACTTGAAG...GACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTACTTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 72 bp GATCCCCTGTTCCTTGACTGGGGAAACACATCCCAGTaGAGCTGGTACACACACAGTCAGCTCCTCCTCCAA +
Preference number: 3 (lower is better)
Translates to: DPLFLDWGNTSQ*SWYTHSQLLLQ
Trigger: TTGGAGGAGGAGCTGACTGTGTGTGTACCAGCTTCACTGGGATGTGTTTCCCCAGTCAAGGAACAGGGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp CCACAGCCACATCTGCTTCATTCGGGGGATCCAACTTaGCATGTCTTGGTAAAGGCATTCATGGTGCTGCCC +
Preference number: 3 (lower is better)
Translates to: PQPHLLHSGDPT*HVLVKAFMVLP
Trigger: GGGCAGCACCATGAATGCCTTTACCAAGACATGCCAAGTTGGATCCCCCGAATGAAGCAGATGTGGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp GCTTTGCTTCAGGACATGTGTGCTACAAGTCCAGGCTaGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCG +
Preference number: 3 (lower is better)
Translates to: ALLQDMCATSPG*TTPRTVRVQQA
Trigger: CGCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACACATGTCCTGAAGCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp GTGAGGTATGGGACTGAGATATCAGAGAGTCCCGGCTaGAGCCTGAGGCCTCTGGACGAAATGGTTTCTTAC +
Preference number: 3 (lower is better)
Translates to: VRYGTEISESPG*SLRPLDEMVSY
Trigger: GTAAGAAACCATTTCGTCCAGAGGCCTCAGGCTCCAGCCGGGACTCTCTGATATCTCAGTCCCATACCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CAA 90 bp CTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACAAGATCCCCTGTTCCTaGACTGGGGAAACACATCCC +
Preference number: 3 (lower is better)
Translates to: LPSQVRPMLASVLPHSQYKIPCS*TGETHP
Trigger: GGGATGTGTTTCCCCAGTCAAGGAACAGGGGATCTT...GTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTACTTGACTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp TGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCTCCAACTTGGCATGTCTaGGTAAAGGCATTCATGGTG +
Preference number: 3 (lower is better)
Translates to: CTRTPTFVIATSWSAGLPPTWHV*VKAFMV
Trigger: CACCATGAATGCCTTTACCAAGACATGCCAAGTTGG...AGGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp CTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACCGGCAGAATTCCGCTTCTTTAATTaGGCCTCTTCCCCACCTGTC +
Preference number: 3 (lower is better)
Translates to: LGSVAASPEAFYLSPPAEFRFFN*ASSPPV
Trigger: GACAGGTGGGGAAGAGGCCAAATTAAAGAAGCGGAA...TTCTGCCGGTGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
ENST00000637789.1
3UTR TCA 72 bp CCTGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTaGGCCTGGACACTTACAGGCACACTGTATGTTCAA +
Preference number: 3 (lower is better)
Translates to: PAHAQQKGFHQL*AWTLTGTLYVQ
Trigger: TTGAACATACAGTGTGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 72 bp TCATGCAGTCACCGGAGCTTTGCTTCAGGACATGTGTaGTACAAGTCCAGGCTGGACAACCCCAAGAACTGT +
Preference number: 3 (lower is better)
Translates to: SCSHRSFASGHV*YKSRLDNPKNC
Trigger: ACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACACATGTCCTGAAGCAAAGCTCCGGTGACTGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 72 bp CTGATGCAACTTTCAGACACACCAGGCCAGAATGTCTaGAGCACAGCGTGCAAAGTGTTTGGGCTTCCCTTC +
Preference number: 3 (lower is better)
Translates to: LMQLSDTPGQNV*STACKVFGLPF
Trigger: GAAGGGAAGCCCAAACACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp CTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTaGCTTGGGCAAGGCAATCATGGGCTAGAGTCAGTA +
Preference number: 3 (lower is better)
Translates to: LKGSTSQPNLPL*LGQGNHGLESV
Trigger: TACTGACTCTAGCCCATGATTGCCTTGCCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CCA 72 bp CTCGGTCACTGCTGTACTGGTCATAAGGCCTCTTTCTaGACATGTTGTTGGGTCGATAGCTTCCGGAACGGT +
Preference number: 3 (lower is better)
Translates to: LGHCCTGHKASF*TCCWVDSFRNG
Trigger: ACCGTTCCGGAAGCTATCGACCCAACAACATGTCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR CCA 72 bp GCTTCAGAAGACTTTGACTCTTCAATTATGGGCTCGTaGCAGGTAAGGACTGTGGGCTGGTACCCATCTCGG +
Preference number: 3 (lower is better)
Translates to: ASEDFDSSIMGS*QVRTVGWYPSR
Trigger: CCGAGATGGGTACCAGCCCACAGTCCTTACCTGCCACGAGCCCATAATTGAAGAGTCAAAGTCTTCTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR CCA 72 bp CTTTCTCTTGATACCTTTCACAGGAGGGCAATACCCTaGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAA +
Preference number: 3 (lower is better)
Translates to: LSLDTFHRRAIP*APSCLYSQQHQ
Trigger: TTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGGTATTGCCCTCCTGTGAAAGGTATCAAGAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR-3UTR CAA 90 bp TCTGAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGGGTGCAATGGGGGTAGAGAAAATATCCACGTGTTaGGTGACTCTTACTCTCTCC +
Preference number: 3 (lower is better)
Translates to: SEKGVSEDLRLQGAMGVEKISTC*VTLTLS
Trigger: GGAGAGAGTAAGAGTCACCAAACACGTGGATATTTT...CTCTACCCCCATTGCACCCTGCAGTCTCAGATCCTCGCTCACCCCCTTCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CAA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGTGTGATTGCAACAAGTaGGTCAGCAGGCCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVCDCNK*VSRPAS
Trigger: AGAGGCAGGCCTGCTGACCAACTTGTTGCAATCACA...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGATGCTGGCATCAGTGTaGCCTCACTCACAGTACTCA +
Preference number: 3 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVMLASV*PHSQYS
Trigger: TGAGTACTGTGAGTGAGGCAACACTGATGCCAGCAT...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 72 bp GGAAATGCAGCAGGAAGTGTTGACCTAGCGCAATACTaGAAGTTTCCCCCACTTGCTGGCACTACTGAACCC +
Preference number: 3 (lower is better)
Translates to: GNAAGSVDLAQY*KFPPLAGTTEP
Trigger: GGGTTCAGTAGTGCCAGCAAGTGGGGGAAACTTTCAGTATTGCGCTAGGTCAACACTTCCTGCTGCATTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 72 bp GGCTCTTTACCTTGGGGGTGGGCAATCATTAGCCCTTaGCTGAGCACTGCTCTGGTTCTACCTAACGAATCT +
Preference number: 3 (lower is better)
Translates to: GSLPWGWAIISP*LSTALVLPNES
Trigger: AGATTCGTTAGGTAGAACCAGAGCAGTGCTCAGTCAAGGGCTAATGATTGCCCACCCCCAAGGTAAAGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR GCA 72 bp ACTACTGAACCCCACATTAGAAGCCTGTTCACTGCCTaGACCAGGACCCCCACCTTTGTGATTGCAACAAGT +
Preference number: 3 (lower is better)
Translates to: TTEPHIRSLFTA*TRTPTFVIATS
Trigger: ACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCAGGCAGTGAACAGGCTTCTAATGTGGGGTTCAGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 72 bp AGAAATACAGACCTACTAGAAGAACGCAGGGCAAGATaGCCACTGGGTCCAGACAATAGAGAAGGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: RNTDLLEERRAR*PLGPDNREGWE
Trigger: CTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATCTTGCCCTGCGTTCTTCTAGTAGGTCTGTATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR GCA 72 bp ATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTaGTATGCACTCCAGCTTTATCTCCCTCACGAAGGT +
Preference number: 3 (lower is better)
Translates to: ICHRLIYQLSIT*YALQLYLPHEG
Trigger: ACCTTCGTGAGGGAGATAAAGCTGGAGTGCATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637789.1
3UTR CCA 72 bp GTGCTGCTCATACTGATGGTGCCTGTCGCTTCCCCATaGTGGATTGTTGTTGCCACCACCATAGTTGAACTT +
Preference number: 3 (lower is better)
Translates to: VLLILMVPVASP*WIVVATTIVEL
Trigger: AAGTTCAACTATGGTGGTGGCAACAACAATCCACCATGGGGAAGCGACAGGCACCATCAGTATGAGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR CCA 72 bp ATCTCTCCAAAGGAGACCTATGATCCAGGGGTGACTTaGAATCGTGAGGAGATTTCTGAGAAGGGGGTGAGC +
Preference number: 3 (lower is better)
Translates to: ISPKETYDPGVT*NREEISEKGVS
Trigger: GCTCACCCCCTTCTCAGAAATCTCCTCACGATTCCAAGTCACCCCTGGATCATAGGTCTCCTTTGGAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR-3UTR CAA 90 bp CCTCACAAGTTACTTCAGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTAAGATCCCCTGTTCCTaGACTGGGGAAACACATCCC +
Preference number: 3 (lower is better)
Translates to: PHKLLQEFNPAHAQQKGFKIPCS*TGETHP
Trigger: GGGATGTGTTTCCCCAGTCAAGGAACAGGGGATCTT...AAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCTGAAGTAACTTGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp TGTAGCTTTCCTTCTCACCACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCGCAGAGATGAAGCAGTaGTGGAAGCTGTTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: CSFPSHHRNQKSTRDSSSAEMKQ*WKLLPS
Trigger: AGAGGGCAACAGCTTCCACAACTGCTTCATCTCTGC...GGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTGGTGAGAAGGAAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp GATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTCAGGTAGGAGGGGCTaGTGGCTTCATCTGCTAGAG +
Preference number: 3 (lower is better)
Translates to: DESSIPCSSFSLGTLFSFSGRRG*WLHLLE
Trigger: CTCTAGCAGATGAAGCCACAAGCCCCTCCTACCTGA...GAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629104.1
3UTR TCA 72 bp CGCCACTCCCCATCAGCAGCATCCATCATGTCAGAGTaGACCAAATCAACCAAATCACACACTGTTCACCAG +
Preference number: 3 (lower is better)
Translates to: RHSPSAASIMSE*TKSTKSHTVHQ
Trigger: CTGGTGAACAGTGTGTGATTTGGTTGATTTGGTTCACTCTGACATGATGGATGCTGCTGATGGGGAGTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR GCA 72 bp GTTGAGCCCCTTGTCAGGTTTGTCGAGCTGTTTCAGTaGCTTTTTCACGGGCCTCATCCTCTCCTTACATAT +
Preference number: 3 (lower is better)
Translates to: VEPLVRFVELFQ*LFHGPHPLLTY
Trigger: ATATGTAAGGAGAGGATGAGGCCCGTGAAAAAGGCACTGAAACAGCTCGACAAACCTGACAAGGGGCTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR GCA 72 bp CATAATAATCTCTGTGTCCCCGGTGGTCTCGGTCACTaGTGTACTGGTCATAAGGCCTCTTTCTGGACATGT +
Preference number: 3 (lower is better)
Translates to: HNNLCVPGGLGH*CTGHKASFWTC
Trigger: ACATGTCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACCGAGACCACCGGGGACACAGAGATTATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR CCA 72 bp CTGCTCATACTGATGGTGCCTGTCGCTTCCCCATGGTaGATTGTTGTTGCCACCACCATAGTTGAACTTTCT +
Preference number: 3 (lower is better)
Translates to: LLILMVPVASPW*IVVATTIVELS
Trigger: AGAAAGTTCAACTATGGTGGTGGCAACAACAATCCACCATGGGGAAGCGACAGGCACCATCAGTATGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR CCA 72 bp TGTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTaGGTCGATAGCTTCCGGAACGGTGGGCATCCATAT +
Preference number: 3 (lower is better)
Translates to: CTGHKASFWTCC*VDSFRNGGHPY
Trigger: ATATGGATGCCCACCGTTCCGGAAGCTATCGACCCAACAACATGTCCAGAAAGAGGCCTTATGACCAGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
3UTR-3UTR CAA 90 bp CACAGGTACTTATTTCCATCTGCCCACCACATGATGTGTGATTCTGTCTACTCTCTCCCAAGAACACATTaGAGGGGTGTACCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: HRYLFPSAHHMMCDSVYSLPRTH*RGVPAP
Trigger: GGGAGCAGGTACACCCCTCAAATGTGTTCTTGGGAG...AGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGGCTGACAAGTGGATTTaGGTCTGTAGGATTTCAGTG +
Preference number: 3 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVADKWI*VCRISV
Trigger: CACTGAAATCCTACAGACCAAAATCCACTTGTCAGC...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp GGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCCGCTTCTTTAATTaGGCCTCTTCCCCACCTGTC +
Preference number: 3 (lower is better)
Translates to: GDESSIPCSSFSLGTLFSFRFFN*ASSPPV
Trigger: GACAGGTGGGGAAGAGGCCAAATTAAAGAAGCGGAA...GGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
3UTR-3UTR CAA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCACAGCTTCAGAAGACTTaGACTCTTCAATTATGGGCT +
Preference number: 3 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPQLQKT*TLQLWA
Trigger: AGCCCATAATTGAAGAGTCAAAGTCTTCTGAAGCTG...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR TCA 72 bp CCTTTTTCACGGGCCTCATCCTCTCCTTACATATGCTaGATGTCTCCTGGTCCAGATCATCATCCTCATCCT +
Preference number: 3 (lower is better)
Translates to: PFSRASSSPYIC*MSPGPDHHPHP
Trigger: AGGATGAGGATGATGATCTGGACCAGGAGACATTCAGCATATGTAAGGAGAGGATGAGGCCCGTGAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR TCA 72 bp ATTTTCTTTCAGCTGCTCTTCGTATTCCTGCATTGCTaGCACACAGCTGTTGTGGATCAGTTCACCCAGGCG +
Preference number: 3 (lower is better)
Translates to: IFFQLLFVFLHC*HTAVVDQFTQA
Trigger: CGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTGAAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR TCA 72 bp CTTTACCTTGGGGGTGGGCAATCATTAGCCCTTGACTaGGCACTGCTCTGGTTCTACCTAACGAATCTTAAC +
Preference number: 3 (lower is better)
Translates to: LYLGGGQSLALD*ALLWFYLTNLN
Trigger: GTTAAGATTCGTTAGGTAGAACCAGAGCAGTGCTCAGTCAAGGGCTAATGATTGCCCACCCCCAAGGTAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR TCA 72 bp CTGCAAAACAGACTAACGCAATTGGGTAGAGTGCAATaGGGCTCTTTACCTTGGGGGTGGGCAATCATTAGC +
Preference number: 3 (lower is better)
Translates to: LQNRLTQLGRVQ*GSLPWGWAIIS
Trigger: GCTAATGATTGCCCACCCCCAAGGTAAAGAGCCTCATTGCACTCTACCCAATTGCGTTAGTCTGTTTTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CAA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGAAAATATCCACGTGTTaGGTGACTCTTACTCTCTCC +
Preference number: 3 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVKISTC*VTLTLS
Trigger: GGAGAGAGTAAGAGTCACCAAACACGTGGATATTTT...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTCTTCAAGTCCTATGCTaGTCCCCACCCGCTTGCCCC +
Preference number: 3 (lower is better)
Translates to: PFATSYGTESPKCEQKEVLQVLC*SPPACP
Trigger: GGGGCAAGCGGGTGGGGACAAGCATAGGACTTGAAG...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp TATCAGCAACTCAAGAGAGAAGCCCTGATGACTGTGGAAACCCTGATGGAAATGGGCCGATACTGCCTTTaGCTACTTCATATGGCACTG +
Preference number: 3 (lower is better)
Translates to: YQQLKREALMTVETLMEMGRYCL*LLHMAL
Trigger: CAGTGCCATATGAAGTAGCAAAAGGCAGTATCGGCC...CATTTCCATCAGGGTTTCCACAGTCATCAGGGCTTCTCTCTTGAGTTGCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCTTCCGCTTCTTTAATTaGGCCTCTTCCCCACCTGTC +
Preference number: 3 (lower is better)
Translates to: NHGLESVLSARSSICGFLFRFFN*ASSPPV
Trigger: GACAGGTGGGGAAGAGGCCAAATTAAAGAAGCGGAA...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CAA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCTTTCCTAGAACTCATTaGTTTCTCCTTGTTCTCCTT +
Preference number: 3 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASFPRTH*FLLVLL
Trigger: AAGGAGAACAAGGAGAAACAAATGAGTTCTAGGAAA...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CAA 90 bp CTGAGCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCTTCAGCCTGGGCACTTaGTTTTCCTTCTTTACCCGA +
Preference number: 3 (lower is better)
Translates to: LSLDTYRHTVCSSQLFCLFSLGT*FSFFTR
Trigger: TCGGGTAAAGAAGGAAAACAAAGTGCCCAGGCTGAA...GAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR TCA 72 bp AAGCTTCGGCTCATCGTACTACTGGTGGCATTGTACTaGAGTAAAGAGGGTGCAGCTTCAGAAGACTTTGAC +
Preference number: 3 (lower is better)
Translates to: KLRLIVLLVALY*SKEGAASEDFD
Trigger: GTCAAAGTCTTCTGAAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CAA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGAACTACAGTAGAAACTaGTTCACCACAGGTACTTAT +
Preference number: 3 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVNYSRN*FTTGTY
Trigger: ATAAGTACCTGTGGTGAACAAGTTTCTACTGTAGTT...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp ACCCTTGTTCACGTGCAGGTTTTAGGTGATGCTAACTCCCTCTTTCTCAACCTGTCCTTGTCCCCTTCTTaGTCTTTCCTAGAACTCATT +
Preference number: 3 (lower is better)
Translates to: TLVHVQVLGDANSLFLNLSLSPS*SFLELI
Trigger: AATGAGTTCTAGGAAAGACAAAGAAGGGGACAAGGA...CAGGTTGAGAAAGAGGGAGTTAGCATCACCTAAAACCTGCACGTGAACAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR TCA 72 bp CCAGCACCCAACAAGGTAAATGTTACATCTGGCATCTaGCAAAAATTACTAGGCACAGAAAGCACCAGGGGA +
Preference number: 3 (lower is better)
Translates to: PAPNKVNVTSGI*QKLLGTESTRG
Trigger: TCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCAGATGTAACATTTACCTTGTTGGGTGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR-3UTR CAA 90 bp GCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCATCCCCAGCATCAGTCAATaGAAAAGAGCCTGCTTAATT +
Preference number: 3 (lower is better)
Translates to: AWTLTGTLYVQVSYSVSIPSISQ*KRACLI
Trigger: AATTAAGCAGGCTCTTTTCAATTGACTGATGCTGGG...GATGGAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp AAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTACTTCGTATTCCTGCATaGCTGACACACAGCTGTTGT +
Preference number: 3 (lower is better)
Translates to: KAQFHAPLSAWALCFPSLLRIPA*LTHSCC
Trigger: ACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAG...TAAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
3UTR TCA 72 bp CCCCAGCATCAGTCAATTGAAAAGAGCCTGCTTAATTaGTGCAACCAAACTTGCTTCCTAAACCTGACTCAG +
Preference number: 3 (lower is better)
Translates to: PQHQSIEKSLLN*CNQTCFLNLTQ
Trigger: CTGAGTCAGGTTTAGGAAGCAAGTTTGGTTGCATCAATTAAGCAGGCTCTTTTCAATTGACTGATGCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 72 bp TCCTGCTGTAATATGGACAGGACCCTGAGATCGCTTTaGTTTACTCGAAGATTTGGCATCACCACTTTTAGG +
Preference number: 3 (lower is better)
Translates to: SCCNMDRTLRSL*FTRRFGITTFR
Trigger: CCTAAAAGTGGTGATGCCAAATCTTCGAGTAAATCAAAGCGATCTCAGGGTCCTGTCCATATTACAGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR TCA 72 bp ACAGGTTCACTTCCTGCTGTAATATGGACAGGACCCTaGGATCGCTTTGATTTACTCGAAGATTTGGCATCA +
Preference number: 3 (lower is better)
Translates to: TGSLPAVIWTGP*DRFDLLEDLAS
Trigger: TGATGCCAAATCTTCGAGTAAATCAAAGCGATCTCAGGGTCCTGTCCATATTACAGCAGGAAGTGAACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR TCA 72 bp TTCAACAACCACAACTTCCTCTTAAAACCCATTCAATaGCCACTGGAGCTCAGAGACTTCTACATTGGTGCT +
Preference number: 3 (lower is better)
Translates to: FNNHNFLLKPIQ*PLELRDFYIGA
Trigger: AGCACCAATGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR GCA 72 bp TCTTTCACTTCTCCCTCTTCTGATGGATTATCTGAATaGCTAGGAGATGAAAGCTCAATTCCATGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: SFTSPSSDGLSE*LGDESSIPCSS
Trigger: AGAGGAGCATGGAATTGAGCTTTCATCTCCTAGGCATTCAGATAATCCATCAGAAGAGGGAGAAGTGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000629104.1
3UTR-3UTR CAA 90 bp GCACCAATCCATTATACAAGGGCCAGATGCAGTTCAACAACCACAACTTCCTCTTCCCTATCACACTCTTaGGCAATTAAATACTGGTTT +
Preference number: 3 (lower is better)
Translates to: APIHYTRARCSSTTTTSSSLSHS*AIKYWF
Trigger: AAACCAGTATTTAATTGCCAAAGAGTGTGATAGGGA...AGAGGAAGTTGTGGTTGTTGAACTGCATCTGGCCCTTGTATAATGGATTGGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR TCA 72 bp TTCACCACAGGTACTTATTTCCATCTGCCCACCACATaGTGTGTGATTCTGTCTACTCTATTTCTTCAAGCT +
Preference number: 3 (lower is better)
Translates to: FTTGTYFHLPTT*CVILSTLFLQA
Trigger: AGCTTGAAGAAATAGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTGGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR TCA 72 bp ACTGTAGGATCAGACCAAAAATATCCACGTGTTTGGTaGCTCTTACTCTCTCCTTTACGAGCTGTCCTTTAT +
Preference number: 3 (lower is better)
Translates to: TVGSDQKYPRVW*LLLSPLRAVLY
Trigger: ATAAAGGACAGCTCGTAAAGGAGAGAGTAAGAGTCACCAAACACGTGGATATTTTTGGTCTGATCCTACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR-3UTR CAA 90 bp CTTAGAGGCTTTATTACTTCATCACTAACAAGGTACTCCAAGGAATGTGAAACAAAGGTACCTTACCTTTaGACTGCTGTAAGAGGCCTT +
Preference number: 3 (lower is better)
Translates to: LRGFITSSLTRYSKECETKVPYL*TAVRGL
Trigger: AAGGCCTCTTACAGCAGTCAAAAGGTAAGGTACCTT...TGTTTCACATTCCTTGGAGTACCTTGTTAGTGATGAAGTAATAAAGCCTCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627622.1
3UTR TCA 72 bp TCCTCTTCATGTTGGATAATGGATTTCACATTAACCTaGACTCCGGATATCTTGATTGTTGGACCTCTCCTT +
Preference number: 3 (lower is better)
Translates to: SSSCWIMDFTLT*TPDILIVGPLL
Trigger: AAGGAGAGGTCCAACAATCAAGATATCCGGAGTTCAGGTTAATGTGAAATCCATTATCCAACATGAAGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
3UTR TCA 72 bp CATGAATGTCAACTTCTCAGAGACGTATCACTTGTCTaGTATTTCATTACTGAGGACCCAAGCACATCAGTT +
Preference number: 3 (lower is better)
Translates to: HECQLLRDVSLV*YFITEDPSTSV
Trigger: AACTGATGTGCTTGGGTCCTCAGTAATGAAATATCAGACAAGTGATACGTCTCTGAGAAGTTGACATTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR CCA 72 bp GGACACTGTAATTTTAGAATCAATGTAACACTGATCTaGCCGATACTGCCTTTTGCTACTTCATATGGCACT +
Preference number: 3 (lower is better)
Translates to: GHCNFRINVTLI*PILPFATSYGT
Trigger: AGTGCCATATGAAGTAGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATTGATTCTAAAATTACAGTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp AGTCAGTTATTCTGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTTTGATGCAACCAAACTaGCTTCCTAAACCTGACTCA +
Preference number: 3 (lower is better)
Translates to: SQLFCLHLERPLDTLNNTLMQPN*LPKPDS
Trigger: TGAGTCAGGTTTAGGAAGCAAGTTTGGTTGCATCAA...AGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACAGAATAACTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp ATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCTCCATCTAGAAAGGCCTTaGGATACTCTTAACAATACT +
Preference number: 3 (lower is better)
Translates to: ISTNNEIFQSQTPGNTILHLERP*DTLNNT
Trigger: AGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATG...GAGGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR-3UTR CAA 90 bp CTTAGAGGCTTTATTACTTCATCACTAACAAGGTACTCCAAGGAATGTGAAACAACAGTAAAGGCCCCTTaGAATAAAGGTACCTTACCT +
Preference number: 3 (lower is better)
Translates to: LRGFITSSLTRYSKECETTVKAP*NKGTLP
Trigger: AGGTAAGGTACCTTTATTCAAAGGGGCCTTTACTGT...TGTTTCACATTCCTTGGAGTACCTTGTTAGTGATGAAGTAATAAAGCCTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627622.1
3UTR-3UTR CAA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACAGGACATCAAAACCATaGTTATATCTGTGTTCCAGG +
Preference number: 3 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHRTSKP*LYLCSR
Trigger: CCTGGAACACAGATATAACAATGGTTTTGATGTCCT...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR TCA 72 bp TATTTCATTACTGAGGACCCAAGCACATCAGTTTCCTaGTGGAATAAATTCCAAGGAAAGGATTTATTCAGC +
Preference number: 3 (lower is better)
Translates to: YFITEDPSTSVS*WNKFQGKDLFS
Trigger: GCTGAATAAATCCTTTCCTTGGAATTTATTCCATCAGGAAACTGATGTGCTTGGGTCCTCAGTAATGAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGAGCCCCGGGCTCTGCTaGCACCTGTCTGTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GPALSTERHGRPSMGGLWSPGLC*HLSVRL
Trigger: GAGCCGGACAGACAGGTGCCAGCAGAGCCCGGGGCT...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ATGACTGAAAGGAGAGTGAGCCCCGGGCTCTGCTGGCACCTGTCTGTCCGGCTCAGCCCCGGGCTCTGCTaGCACCTGTCTGTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: MTERRVSPGLCWHLSVRLSPGLC*HLSVRL
Trigger: GAGCCGGACAGACAGGTGCCAGCAGAGCCCGGGGCT...GAGCCGGACAGACAGGTGCCAGCAGAGCCCGGGGCTCACTCTCCTTTCAGTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGATATTCGGGCTCATTTaGGGGTGCCGGCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: GPALSTERHGRPSMGGLWIFGLI*GCRLPT
Trigger: AGTCGGAAGCCGGCACCCTCAAATGAGCCCGAATAT...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGTCCCAAGAACACATTTaGGGGGTGTACCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GPALSTERHGRPSMGGLWSQEHI*GVYLLP
Trigger: GGGGAGCAGGTACACCCCTCAAATGTGTTCTTGGGA...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTGGGCTGAGGAATGACTaGAAGGAGAGTGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPGLRND*KESEPR
Trigger: CCGGGGCTCACTCTCCTTTCAGTCATTCCTCAGCCC...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCCAGCTCAGCATCACGTaGTATGCACTCCAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGQLSIT*YALQPF
Trigger: GAACGGCTGGAGTGCATAGCACGTGATGCTGAGCTG...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCCTGTCGCTTCCCCATaGTGGATTGTTGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: GPALSTERHGRPSMGGLWPVASP*WIVVAT
Trigger: GGTGGCAACAACAATCCACCATGGGGAAGCGACAGG...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCAAGTGCCCGTCAAAGTaGGAGGCCAGAACTAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGKCPSK*EARTRL
Trigger: CAGCCTAGTTCTGGCCTCCCACTTTGACGGGCACTT...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGTGTGAGGTATGGGACTaGGATATCAGAGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GPALSTERHGRPSMGGLWCEVWD*DIRESR
Trigger: CCGGGACTCTCTGATATCTCAGTCCCATACCTCACA...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GATGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCGGGGTGGGTCCACTaGGCTCTCAACACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: DGLKQPGPLAWLPSPNVAAGWVH*ALNTSF
Trigger: GAAGCTTGTGTTGAGAGCTCAGTGGACCCACCCCGC...TGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CAGGCCAGCCCTGCGATGCTCTGTGTAGCAGGGAGCAAGGGTCACACCACAGCCAGCTCCTCCTCCAAGTaGCCGTCAAAGTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QASPAMLCVAGSKGHTTASSSSK*PSKWEA
Trigger: GGCCTCCCACTTTGACGGGCACTTGGAGGAGGAGCT...GGCTGTGGTGTGACCCTTGCTCCCTGCTACACAGAGCATCGCAGGGCTGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp TGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCATGCACCAGTTCCTaGCCCGACCATGCACTAAGG +
Preference number: 4 (lower is better)
Translates to: WPKAAWTLGMAPLAQRGSPCTSS*PDHALR
Trigger: CCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGG...GCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCCTTCCTCTTTGGCTTaGGCAAGGCAATCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GPALSTERHGRPSMGGLWPSSLA*ARQSWA
Trigger: AGCCCATGATTGCCTTGCCCAAGCCAAAGAGGAAGG...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTGCATCCCAGCCGTCGTaGATTTCCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPASQPS*ISSFQE
Trigger: CTCCTGGAAGGAGGAAATCCACGACGGCTGGGATGC...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp TGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCTGCTACGGGGGCCCCCTaGGGCTGCCCGAAAGTTAGG +
Preference number: 4 (lower is better)
Translates to: CTRTPTFVIATSWSAGLPATGAP*GCPKVR
Trigger: CCTAACTTTCGGGCAGCCTCAGGGGGCCCCCGTAGC...AGGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACCGGCAGAACCCTGCCCTCTCCACTaGGCGTCACGGCAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGSVAASPEAFYLSPPAEPCPLH*ASRQAL
Trigger: GAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGG...TTCTGCCGGTGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp ATGACTGAAAGGAGAGTGAGCCCCGGGCTCTGCTGGCACCTGTCTGTCCGGCTCCCATCTGTCCCCAGATaGGTGGGGCACAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: MTERRVSPGLCWHLSVRLPSVPR*VGHRWP
Trigger: AGGCCATCTGTGCCCCACTCATCTGGGGACAGATGG...GAGCCGGACAGACAGGTGCCAGCAGAGCCCGGGGCTCACTCTCCTTTCAGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGGTCGAGCTGTTTCAGTaGCTTTTTCACGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GPALSTERHGRPSMGGLWVELFQ*LFHGPH
Trigger: ATGAGGCCCGTGAAAAAGGCACTGAAACAGCTCGAC...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCTTTGAGGGGTGTACCTaGTCCCCTTCAAGTCCTATG +
Preference number: 4 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGFEGCT*SPSSPM
Trigger: CATAGGACTTGAAGGGGAGCAGGTACACCCCTCAAA...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp TGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCAGGCATTCATGGTGCTaGCCAGGACACCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: WPKAAWTLGMAPLAQRGSRHSWC*PGHQQA
Trigger: TGCTTGCTGGTGTCCTGGGCAGCACCATGAATGCCT...GCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CCCTACCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGAGCCCCGGGCTCTaGTGGCACCTGTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: PYPSLSLLPSQVRPMLASVSPGL*WHLSVR
Trigger: CCGGACAGACAGGTGCCAGCAGAGCCCGGGGCTCAC...TGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGGTAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGGGTGCAATGGGGGTAGAGGCTTCAGAGAGTCCCGGCTaGAGCCTGAGGCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: EKGVSEDLRLQGAMGVEASESPG*SLRPLD
Trigger: GTCCAGAGGCCTCAGGCTCCAGCCGGGACTCTCTGA...AGCCTCTACCCCCATTGCACCCTGCAGTCTCAGATCCTCGCTCACCCCCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCGAGATGAAGCAGTTGTaGAAGCTGTTGCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGEMKQL*KLLPSL
Trigger: GAGAGAGGGCAACAGCTTCCACAACTGCTTCATCTC...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCATCTGCCCACCACATaGTGTGTGATTCTGTCTACT +
Preference number: 4 (lower is better)
Translates to: GPALSTERHGRPSMGGLWHLPTT*CVILST
Trigger: AGTAGACAGAATCACACATCATGTGGTGGGCAGATG...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCCTTCACTCTCCCATGTaGTGTGGATGTAAGACCAAC +
Preference number: 4 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGLHSPM*CGCKTN
Trigger: GTTGGTCTTACATCCACAGCACATGGGAGAGTGAAG...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp CTGGCACTACTGAACCCCACATTAGAAGCCTGTTCACTGCCTGCACCAGGACCCTTGTCCCCACCCGCTTaGCCCAACTCGCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: LALLNPTLEACSLPAPGPLSPPA*PNSPLP
Trigger: GGGGAGTGGCGAGTTGGGGCAAGCGGGTGGGGACAA...GGGTCCTGGTGCAGGCAGTGAACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTGGCCTCTGGACGAAATaGTTTCTTACCCCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPGLWTK*FLTPSH
Trigger: GTGACTGGGGGTAAGAAACCATTTCGTCCAGAGGCC...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTAGAACTAGGCTGGAATaGGATGGGGTGCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPRTRLE*DGVPKC
Trigger: GCACTTTGGCACCCCATCCCATTCCAGCCTAGTTCT...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGCATCCCCTCGCCCAACGTaGCAGCCCTCAGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: HTPNRRVFTSSEPGHLQASPRPT*QPSEEP
Trigger: CGGCTCCTCTGAGGGCTGCCACGTTGGGCGAGGGGA...TGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CAGGCCAGCCCTGCGATGCTCTGTGTAGCAGGGAGCAAGGGTCACACCACAGCCCTGTCCCCAGATGAGTaGGGCACAGATGGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: QASPAMLCVAGSKGHTTALSPDE*GTDGLK
Trigger: CTTTAGGCCATCTGTGCCCCACTCATCTGGGGACAG...GGCTGTGGTGTGACCCTTGCTCCCTGCTACACAGAGCATCGCAGGGCTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCGACAATAGAGAAGGGTaGGAGCGAGGGGCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPDNREG*ERGAVS
Trigger: GGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTC...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTGATGTGCTCCTGATCTaGGTAGGCTTTAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPDVLLI*VGFKAL
Trigger: GAGTGCCTTAAAGCCTACTCAGATCAGGAGCACATC...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CAGGTCCCAGCAGCCTCCATGCACCAGTTCCTGCCCCGACCATGCACTAAGGTCTGCTCCTTCAGCCAGTaGGTTGACAGCAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: QVPAASMHQFLPRPCTKVCSFSQ*VDSSSM
Trigger: CATGCTGCTGCTGTCAACTCACTGGCTGAAGGAGCA...GACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCACCCCACAACTCAGGTaGTGTACCATAGACCCACCC +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPTPQLR*CTIDPP
Trigger: GGGTGGGTCTATGGTACATCACCTGAGTTGTGGGGT...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCGGTGGTCTCGGTCACTaGTGTACTGGTCATAAGGCC +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPGGLGH*CTGHKA
Trigger: GGCCTTATGACCAGTACAGCAGTGACCGAGACCACC...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCTGGGCAAGGCAATCATaGGCTAGAGTCAGTATTATC +
Preference number: 4 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGWARQS*ARVSII
Trigger: GATAATACTGACTCTAGCCCATGATTGCCTTGCCCA...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ATTTCTGAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGGGTGCAATGGGGGTAGAAGACCGCTGGTGCTaGGCCTGGGCTGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ISEKGVSEDLRLQGAMGVEDRWC*AWAAAP
Trigger: AGGAGCAGCAGCCCAGGCCCAGCACCAGCGGTCTTC...TACCCCCATTGCACCCTGCAGTCTCAGATCCTCGCTCACCCCCTTCTCAGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CAGGTCCCAGCAGCCTCCATGCACCAGTTCCTGCCCCGACCATGCACTAAGGTCCTGTCCCCAGATGAGTaGGGCACAGATGGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: QVPAASMHQFLPRPCTKVLSPDE*GTDGLK
Trigger: CTTTAGGCCATCTGTGCCCCACTCATCTGGGGACAG...GACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCGAAAGTTGCGTAAAGTaGGGCAAAGGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPESCVK*GKGREQ
Trigger: CTGCTCCCTGCCTTTGCCTCACTTTACGCAACTTTC...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGAACATTCTCACCATCTaGGAGAAGATAAGCACTCGA +
Preference number: 4 (lower is better)
Translates to: GPALSTERHGRPSMGGLWNILTI*EKISTR
Trigger: TCGAGTGCTTATCTTCTCTCAGATGGTGAGAATGTT...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp CAGGCCAGCCCTGCGATGCTCTGTGTAGCAGGGAGCAAGGGTCACACCACAGCCGGGGGAATCTGTGTTTaGTTTGAAGTCCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QASPAMLCVAGSKGHTTAGGICV*FEVLCP
Trigger: TGGGCACAGGACTTCAAAGCAAACACAGATTCCCCC...GGCTGTGGTGTGACCCTTGCTCCCTGCTACACAGAGCATCGCAGGGCTGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp TGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCAGTGACTCGATGCATTaGTGTGTAGCGAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: WPKAAWTLGMAPLAQRGSSDSMH*CVANCP
Trigger: AGGACAGTTCGCTACACAGCAATGCATCGAGTCACT...GCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCGTCCTCAGACCCATCTaGATTGAAGTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPVLRPI*IEVVQC
Trigger: GCACTGGACCACTTCAATGCAGATGGGTCTGAGGAC...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCCAGGCGCTTCAGATCTaGCACCGACTTATCTACCAG +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPQALQI*HRLIYQ
Trigger: CTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCTG...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GATGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCATGCTGGCATCAGTGTTaGCTCACTCACAGTACTCAG +
Preference number: 4 (lower is better)
Translates to: DGLKQPGPLAWLPSPNVACWHQC*LTHSTQ
Trigger: CTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCA...TGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCGCCATGTCCACTTCCTaGATCACTTCCCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPAMSTS*ITSLLT
Trigger: AGTGAGCAGGGAAGTGATCCAGGAAGTGGACATGGC...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCAGGAGAGGAATGATATaGTCTGGATGGTCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGRRGMI*SGWSFL
Trigger: TAGGAAAGACCATCCAGACCATATCATTCCTCTCCT...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp TGGAATCGTGAGGAGATTTCTGAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGCCTGGACCCTTGGCATaGCTCCCCTCGCCCAACGTG +
Preference number: 4 (lower is better)
Translates to: WNREEISEKGVSEDLRLQPGPLA*LPSPNV
Trigger: CACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGG...CTGCAGTCTCAGATCCTCGCTCACCCCCTTCTCAGAAATCTCCTCACGATTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp TGGAATCGTGAGGAGATTTCTGAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGAGCAGCCTGGACCCTTaGCATGGCTCCCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: WNREEISEKGVSEDLRLQSSLDP*HGSPRP
Trigger: TGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCT...CTGCAGTCTCAGATCCTCGCTCACCCCCTTCTCAGAAATCTCCTCACGATTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCTTCGGATTTCTCCCTTaGTGGAACCATCCAGACGCT +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPFGFLP*WNHPDA
Trigger: AGCGTCTGGATGGTTCCATCAAGGGAGAAATCCGAA...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTCAAAATGTGCAGCTTTaGCACGACAGGTTAAGCAGT +
Preference number: 4 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPQNVQL*HDRLSS
Trigger: ACTGCTTAACCTGTCGTGTCAAAGCTGCACATTTTG...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp ATAGCTTCCGGAACGGTGGGCATCCATATGTCGCCGGTCCCCATAATGGTGGTCCCCATAGCGGGGCGGTaGTCAGACATTCGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: IASGTVGIHMSPVPIMVVPIAGR*SDIRRK
Trigger: TTTCCGACGAATGTCTGATCACCGCCCCGCTATGGG...GACCACCATTATGGGGACCGGCGACATATGGATGCCCACCGTTCCGGAAGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR TCA 90 bp CTGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCTGCTCCTTCAGCCAGTaGGTTGACAGCAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: LHQDPHLCDCNKLVSRPACSFSQ*VDSSSM
Trigger: CATGCTGCTGCTGTCAACTCACTGGCTGAAGGAGCA...GGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCCTGGTGGCATTGTACTaGAGTAAAGAGGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPLVALY*SKEGAA
Trigger: AGCTGCACCCTCTTTACTTCAGTACAATGCCACCAG...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCAAGGTACAGTGCAAATaGCGCACATCATCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPKVQCK*RTSSAQ
Trigger: CTGGGCTGATGATGTGCGTCATTTGCACTGTACCTT...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CCCTACCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGCTCGGGCTTGTGCCTaGAAGTCATTCTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PYPSLSLLPSQVRPMLASARACA*KSFWGF
Trigger: GAACCCCCAGAATGACTTGCAGGCACAAGCCCGAGC...TGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGGTAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp GGCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGACAGGGATAGATTTATaGAGCATCTCAAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: GPALSTERHGRPSMGGLWTGIDL*SISNSS
Trigger: AGAGGAGTTTGAGATGCTGCATAAATCTATCCCTGT...CCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp ATGACTGAAAGGAGAGTGAGCCCCGGGCTCTGCTGGCACCTGTCTGTCCGGCTCGAAAGCTCAATTCCATaGTCCTCTTTCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MTERRVSPGLCWHLSVRLESSIP*SSFSLG
Trigger: GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTC...GAGCCGGACAGACAGGTGCCAGCAGAGCCCGGGGCTCACTCTCCTTTCAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGTTGTCCCCACCCGCTTaGCCCAACTCGCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVLSPPA*PNSPLP
Trigger: GGGGAGTGGCGAGTTGGGGCAAGCGGGTGGGGACAA...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCATCAGAGAGTCCCGGCTaGAGCCTGAGGCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPSESPG*SLRPLD
Trigger: GTCCAGAGGCCTCAGGCTCCAGCCGGGACTCTCTGA...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp GATGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGATCCAGGGGTGACTTaGAATCGTGAGGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: DGLKQPGPLAWLPSPNVADPGVT*NREEIS
Trigger: AGAAATCTCCTCACGATTCCAAGTCACCCCTGGATC...TGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CCCTACCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAACCCAGACCCTCATCTaGAAACCACACAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PYPSLSLLPSQVRPMLASTQTLI*KPHRPA
Trigger: GGCTGGCCTGTGTGGTTTCCAGATGAGGGTCTGGGT...TGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGGTAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CAA 72 bp GACTGTGGCCAGGTGGCTCATGCAGTCACCGGAGCTTaGCTTCAGGACATGTGTGCTACAAGTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DCGQVAHAVTGA*LQDMCATSPGW
Trigger: CCAGCCTGGACTTGTAGCACACATGTCCTGAAGCAAAGCTCCGGTGACTGCATGAGCCACCTGGCCACAGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTGCTACGGGGGCCCCCTaGGGCTGCCCGAAAGTTAGG +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLATGAP*GCPKVR
Trigger: CCTAACTTTCGGGCAGCCTCAGGGGGCCCCCGTAGC...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GATGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAATATGGACAGGACCCTaGGATCGCTTTGATTTACTC +
Preference number: 4 (lower is better)
Translates to: DGLKQPGPLAWLPSPNVAIWTGP*DRFDLL
Trigger: GAGTAAATCAAAGCGATCTCAGGGTCCTGTCCATAT...TGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCCCCATAGCGGGGCGGTaGTCAGACATTCGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASPIAGR*SDIRRK
Trigger: TTTCCGACGAATGTCTGATCACCGCCCCGCTATGGG...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCCTGGCCACACTACTCCCCCAGAGCTGGACCCAGTaGAAGGCCTCCCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: HRNQKSTRDSSSLATLLPQSWTQ*KASHSL
Trigger: CAAGGAATGGGAGGCCTTTCACTGGGTCCAGCTCTG...GGGGAGTAGTGTGGCCAGGGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACCGGCAGAACAGAGCTGGACCCAGTaGAAGGCCTCCCATTCCTTG +
Preference number: 4 (lower is better)
Translates to: LGSVAASPEAFYLSPPAEQSWTQ*KASHSL
Trigger: CAAGGAATGGGAGGCCTTTCACTGGGTCCAGCTCTG...TTCTGCCGGTGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp GTGTCCCCGGTGGTCTCGGTCACTGCTGTACTGGTCATAAGGCCTCTTTCTGGATCCCAAGAACACATTTaGGGGGTGTACCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VSPVVSVTAVLVIRPLSGSQEHI*GVYLLP
Trigger: GGGGAGCAGGTACACCCCTCAAATGTGTTCTTGGGA...TCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACCGAGACCACCGGGGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTCCACCACATGATGTGTaGTTCTGTCTACTCTATTTC +
Preference number: 4 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPPPHDV*FCLLYF
Trigger: GAAATAGAGTAGACAGAATCACACATCATGTGGTGG...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCATCCCCTGCCCTCTCCACTaGGCGTCACGGCAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: AWTLTGTLYVQVSYSVSIPCPLH*ASRQAL
Trigger: GAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGG...GATGGAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp TGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCTCTGTCTGTCCGGCTCTaGAAGACCGCAGTGATTAGC +
Preference number: 4 (lower is better)
Translates to: CTRTPTFVIATSWSAGLPLSVRL*KTAVIS
Trigger: GCTAATCACTGCGGTCTTTCAGAGCCGGACAGACAG...AGGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTCTCTACATCAAAATGTaGAGCTTTGACACGACAGGT +
Preference number: 4 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPLYIKM*SFDTTG
Trigger: ACCTGTCGTGTCAAAGCTGCACATTTTGATGTAGAG...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CAGGTCCCAGCAGCCTCCATGCACCAGTTCCTGCCCCGACCATGCACTAAGGTCGACAGGTTCACTTCCTaGTGTAATATGGACAGGACC +
Preference number: 4 (lower is better)
Translates to: QVPAASMHQFLPRPCTKVDRFTS*CNMDRT
Trigger: GGTCCTGTCCATATTACAGCAGGAAGTGAACCTGTC...GACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ATGACTGAAAGGAGAGTGAGCCCCGGGCTCTGCTGGCACCTGTCTGTCCGGCTCAACTTTCTTTCCCTCTaGCAGTCTCCTCGATCTGCA +
Preference number: 4 (lower is better)
Translates to: MTERRVSPGLCWHLSVRLNFLSL*QSPRSA
Trigger: TGCAGATCGAGGAGACTGGCAGAGGGAAAGAAAGTT...GAGCCGGACAGACAGGTGCCAGCAGAGCCCGGGGCTCACTCTCCTTTCAGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CCCCATCTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGGGTGGTCTCGGTCACTaGTGTACTGGTCATAAGGCC +
Preference number: 4 (lower is better)
Translates to: PHLPTLKGSTSQPNLPLWGGLGH*CTGHKA
Trigger: GGCCTTATGACCAGTACAGCAGTGACCGAGACCACC...CCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAGATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp GTAGCCCATAGCGGGGCGGTGATCAGACATTCGTCGGAAATCCTGCTGGTGGTAGGTGGTCTCGGTCACTaGTGTACTGGTCATAAGGCC +
Preference number: 4 (lower is better)
Translates to: VAHSGAVIRHSSEILLVVGGLGH*CTGHKA
Trigger: GGCCTTATGACCAGTACAGCAGTGACCGAGACCACC...TACCACCAGCAGGATTTCCGACGAATGTCTGATCACCGCCCCGCTATGGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR GCA 90 bp GTGTCCCCGGTGGTCTCGGTCACTGCTGTACTGGTCATAAGGCCTCTTTCTGGATGGAATGGGATGGGGTaGCAAAGTGCAGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: VSPVVSVTAVLVIRPLSGWNGMG*QSAGVV
Trigger: CACCACTCCTGCACTTTGGCACCCCATCCCATTCCA...TCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACCGAGACCACCGGGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp AGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGTTGGTCAGCAGGCCTaGCTCTGCATCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSLTLHTPNRRVFTSSEPVGQQA*LCIPFS
Trigger: GGAGAAGGGGATGCAGAGGCAGGCCTGCTGACCAAC...AGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCCTGGCCACACTACTCCCCGGATCGTCCGGCCAGTaGTGTCCATGCGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: HRNQKSTRDSSSLATLLPGSSGQ*CPCAES
Trigger: TGATTCAGCGCATGGACACCACTGGCCGGACGATCC...GGGGAGTAGTGTGGCCAGGGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTATTGTAGTTATCTCTTaGGTGTCCATGCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPIVVIS*VSMHLW
Trigger: CCACAGATGCATGGACACCCAAGAGATAACTACAAT...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GTGTCCCCGGTGGTCTCGGTCACTGCTGTACTGGTCATAAGGCCTCTTTCTGGACCTGTCGCTTCCCCATaGTGGATTGTTGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: VSPVVSVTAVLVIRPLSGPVASP*WIVVAT
Trigger: GGTGGCAACAACAATCCACCATGGGGAAGCGACAGG...TCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACCGAGACCACCGGGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp CATGTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGGACTGTGGCCAGGTaGCTCATGCAGTCACCGGAG +
Preference number: 4 (lower is better)
Translates to: HVCYKSRLDNPKNCEGSARTVAR*LMQSPE
Trigger: CTCCGGTGACTGCATGAGCCACCTGGCCACAGTCCT...TGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AACACAAGCTTCCGGGACCCAGACCCTCATCTGGAAACCACACAGGCCAGCCCTCCTTCCTCTTTGGCTTaGGCAAGGCAATCATGGGCT +
Preference number: 4 (lower is better)
Translates to: NTSFRDPDPHLETTQASPPSSLA*ARQSWA
Trigger: AGCCCATGATTGCCTTGCCCAAGCCAAAGAGGAAGG...AGGGCTGGCCTGTGTGGTTTCCAGATGAGGGTCTGGGTCCCGGAAGCTTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CAAGGCAATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTGAGCCGGAAGACCGCTaGTGCTGGGCCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QGNHGLESVLSARSSICGEPEDR*CWAWAA
Trigger: AGCAGCCCAGGCCCAGCACCAGCGGTCTTCCGGCTC...ACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATTGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CCCTGGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGATATTCGGGCTCATTTaGGGGTGCCGGCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: PWAPSCLYSQQHQSIIQGIFGLI*GCRLPT
Trigger: AGTCGGAAGCCGGCACCCTCAAATGAGCCCGAATAT...CCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp CCCCATCTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGGACGACTGTGTCCGCTaGAGCCAAATTGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: PHLPTLKGSTSQPNLPLWDDCVR*SQIDSQ
Trigger: CTGGGAATCAATTTGGCTTCAGCGGACACAGTCGTC...CCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CAGGTCCCAGCAGCCTCCATGCACCAGTTCCTGCCCCGACCATGCACTAAGGTCACCCTGAGATCGCTTTaGTTTACTCGAAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: QVPAASMHQFLPRPCTKVTLRSL*FTRRFG
Trigger: GCCAAATCTTCGAGTAAATCAAAGCGATCTCAGGGT...GACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GGTGCCTGTCATAATAATCTCTGTGTCCCCGGTGGTCTCGGTCACTGCTGTACTCAGTGCTGCTCATACTaGTGGTGCCTGTCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GACHNNLCVPGGLGHCCTQCCSY*WCLSLP
Trigger: GGGAAGCGACAGGCACCATCAGTATGAGCAGCACTG...AGTACAGCAGTGACCGAGACCACCGGGGACACAGAGATTATTATGACAGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR TCA 90 bp CCCATAATGGTGGTCCTTGTACCAGTGCTGCTCATACTGATGGTGCCTGTCGCTCAGTGCTGCTCATACTaGTGGTGCCTGTCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PIMVVLVPVLLILMVPVAQCCSY*WCLSLP
Trigger: GGGAAGCGACAGGCACCATCAGTATGAGCAGCACTG...AGCGACAGGCACCATCAGTATGAGCAGCACTGGTACAAGGACCACCATTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR TCA 90 bp GTAGCCCATAGCGGGGCGGTGATCAGACATTCGTCGGAAATCCTGCTGGTGGTAAGATCCCCTGTTCCTTaGCTGGGGAAACACATCCCA +
Preference number: 4 (lower is better)
Translates to: VAHSGAVIRHSSEILLVVRSPVP*LGKHIP
Trigger: TGGGATGTGTTTCCCCAGTCAAGGAACAGGGGATCT...TACCACCAGCAGGATTTCCGACGAATGTCTGATCACCGCCCCGCTATGGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCATGCAGGACCTCTGGTaGCTCCTTTGCCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASMQDLW*LLCPSF
Trigger: AAAGGAGGGGCAAAGGAGTCACCAGAGGTCCTGCAT...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CTGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCTCTGCTTCAGGGCCTTaGATTCTCTTGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: LHQDPHLCDCNKLVSRPASASGP*ILLLGW
Trigger: CCATCCCAACAAGAGAATGCAAGGCCCTGAAGCAGA...GGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp AGGCGCTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGATGCGCTCGGGCTTGTaGCTGCAAGTCATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RRFRSATDLSTSSASRAMMRSGL*LQVILG
Trigger: CCCCAGAATGACTTGCAGGCACAAGCCCGAGCGCAT...CATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGCAGGCGCTTCAGATCTaGCACCGACTTATCTACCAG +
Preference number: 4 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGQALQI*HRLIYQ
Trigger: CTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCTG...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp CACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGCATCTCTTGGGTGTCCATaGATCTGTGGGCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: HTPNRRVFTSSEPGHLQASLGCP*ICGPWE
Trigger: CTCCCATGGCCCACAGATGCATGGACACCCAAGAGA...TGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGCAGATGGGGTGCCAAAGTaGAGGAGTGGTGACCCGAAT +
Preference number: 4 (lower is better)
Translates to: HTPNRRVFTSSEPGHLQADGVPK*RSGDPN
Trigger: ATTCGGGTCACCACTCCTGCACTTTGGCACCCCATC...TGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp GTGTCCCCGGTGGTCTCGGTCACTGCTGTACTGGTCATAAGGCCTCTTTCTGGAGCTTCAGGACATGTGTaGTACAAGTCCAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VSPVVSVTAVLVIRPLSGASGHV*YKSRLD
Trigger: GTCCAGCCTGGACTTGTAGCACACATGTCCTGAAGC...TCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACCGAGACCACCGGGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp GTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCAGCCAGCACTACCCAACTCTCTaGAGGGGCTCACCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VRPMLASVLPHSQYSVSQHYPTL*RGSPPS
Trigger: GGAAGGAGGTGAGCCCCTGCAGAGAGTTGGGTAGTG...CTGGCTGACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp TATCAGCAACTCAAGAGAGAAGCCCTGATGACTGTGGAAACCCTGATGGAAATGGTGAGCCCCGGGCTCTaGTGGCACCTGTCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: YQQLKREALMTVETLMEMVSPGL*WHLSVR
Trigger: CCGGACAGACAGGTGCCAGCAGAGCCCGGGGCTCAC...CATTTCCATCAGGGTTTCCACAGTCATCAGGGCTTCTCTCTTGAGTTGCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCCTGGCCACACTACTCCCCAGGCTGGCTTCTCTTTaGCTTCTGGGAGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: HRNQKSTRDSSSLATLLPRLASL*LLGGLA
Trigger: AGCCAGTCCTCCCAGAAGCCAAAGAGAAGCCAGCCT...GGGGAGTAGTGTGGCCAGGGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp ATAGCTTCCGGAACGGTGGGCATCCATATGTCGCCGGTCCCCATAATGGTGGTCGGCCTCTGGACGAAATaGTTTCTTACCCCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: IASGTVGIHMSPVPIMVVGLWTK*FLTPSH
Trigger: GTGACTGGGGGTAAGAAACCATTTCGTCCAGAGGCC...GACCACCATTATGGGGACCGGCGACATATGGATGCCCACCGTTCCGGAAGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCCATAAGGCCTCTTTCTaGACATGTTGTTGGGTCGAT +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPHKASF*TCCWVD
Trigger: ATCGACCCAACAACATGTCCAGAAAGAGGCCTTATG...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGCACGGATCTCCTCCGCTTaGAGTCATGATGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: HTPNRRVFTSSEPGHLQARISSA*SHDGAC
Trigger: ACAGGCACCATCATGACTCCAAGCGGAGGAGATCCG...TGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGCAAGGCCAGAACTAGGCTaGAATGGGATGGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: HTPNRRVFTSSEPGHLQARPELG*NGMGCQ
Trigger: TTGGCACCCCATCCCATTCCAGCCTAGTTCTGGCCT...TGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GGGCATCCATATGTCGCCGGTCCCCATAATGGTGGTCCTTGTACCAGTGCTGCTGAAACCTACCTTCCCTaGCACAGTGGGAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GHPYVAGPHNGGPCTSAAETYLP*HSGKRR
Trigger: CCTCCTTTTCCCACTGTGCCAGGGAAGGTAGGTTTC...AGCAGCACTGGTACAAGGACCACCATTATGGGGACCGGCGACATATGGATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CCCATAATGGTGGTCCTTGTACCAGTGCTGCTCATACTGATGGTGCCTGTCGCTACCCAGACCCTCATCTaGAAACCACACAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PIMVVLVPVLLILMVPVATQTLI*KPHRPA
Trigger: GGCTGGCCTGTGTGGTTTCCAGATGAGGGTCTGGGT...AGCGACAGGCACCATCAGTATGAGCAGCACTGGTACAAGGACCACCATTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CTGGCACTACTGAACCCCACATTAGAAGCCTGTTCACTGCCTGCACCAGGACCCGCTACAAGTCCAGGCTaGACAACCCCAAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: LALLNPTLEACSLPAPGPATSPG*TTPRTV
Trigger: CACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGC...GGGTCCTGGTGCAGGCAGTGAACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCAGCCAGTCCATGGGAGGACTGTaGCCAGGTGGCTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: VRPMLASVLPHSQYSVSQSMGGL*PGGSCS
Trigger: ACTGCATGAGCCACCTGGCCACAGTCCTCCCATGGA...CTGGCTGACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTACTGTGTGGCCTAAGTaGAGACACAGGCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RSLTLHTPNRRVFTSSEPTVWPK*RHRPCP
Trigger: AGGGCAGGGCCTGTGTCTCCACTTAGGCCACACAGT...AGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCCGCTGGTGCTGGGCCTaGGCTGCTGCTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: NHGLESVLSARSSICGFLRWCWA*AAAPAD
Trigger: GTCAGCAGGAGCAGCAGCCCAGGCCCAGCACCAGCG...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CAAGGCAATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTGAAGACCGCTGGTGCTaGGCCTGGGCTGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGNHGLESVLSARSSICGEDRWC*AWAAAP
Trigger: AGGAGCAGCAGCCCAGGCCCAGCACCAGCGGTCTTC...ACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATTGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CAA 72 bp TTTCAGCAGGCAGTTCCGGGTGTGTTCCAGCTGTTCTaGCACGTTGAGCCCCTTGTCAGGTTTGTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: FQQAVPGVFQLF*HVEPLVRFVEL
Trigger: CAGCTCGACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGCTGGAACACACCCGGAACTGCCTGCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CTGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCGGAATTTCTTTCCAATaGGGGCTTCATCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LHQDPHLCDCNKLVSRPAGISFQ*GLHLPS
Trigger: GCTGGGAAGATGAAGCCCTCATTGGAAAGAAATTCC...GGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CTGGCACTACTGAACCCCACATTAGAAGCCTGTTCACTGCCTGCACCAGGACCCAGTCAGAGTCAAAGATaGCGACTGTGTCCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LALLNPTLEACSLPAPGPSQSQR*RLCPLK
Trigger: CTTCAGCGGACACAGTCGTCATCTTTGACTCTGACT...GGGTCCTGGTGCAGGCAGTGAACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp GTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCAGCCAGAAAGTGCAGGAGTGGTaGCCCGAATCAGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VRPMLASVLPHSQYSVSQKVQEW*PESELD
Trigger: GTCCAGCTCTGATTCGGGTCACCACTCCTGCACTTT...CTGGCTGACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CTGCTGGTGGTAATTTTGAGGCCTAAATTCATCGGATCTCCTCCGCTTGGAGTCGCGGGGTGGGTCCACTaGGCTCTCAACACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLVVILRPKFIGSPPLGVAGWVH*ALNTSF
Trigger: GAAGCTTGTGTTGAGAGCTCAGTGGACCCACCCCGC...GACTCCAAGCGGAGGAGATCCGATGAATTTAGGCCTCAAAATTACCACCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCAATACAAGTGAGCTGTaGGACAACTTCAAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPNTSEL*DNFKQA
Trigger: AGCTTGCTTGAAGTTGTCTCACAGCTCACTTGTATT...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CTGGCACTACTGAACCCCACATTAGAAGCCTGTTCACTGCCTGCACCAGGACCCGCACAAAAATGGAGGTaGGCCATGGCTTCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: LALLNPTLEACSLPAPGPAQKWR*AMASKL
Trigger: CAGCTTAGAAGCCATGGCGCACCTCCATTTTTGTGC...GGGTCCTGGTGCAGGCAGTGAACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp CACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGCACACTTTCCGACTGACTaGCTGAGTCTGAACCCGAAG +
Preference number: 4 (lower is better)
Translates to: HTPNRRVFTSSEPGHLQAHFPTD*LSLNPK
Trigger: CTTCGGGTTCAGACTCAGGCAGTCAGTCGGAAAGTG...TGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCGGCCAGTGGTGTCCATaGGCTGAATCACCAGATGAT +
Preference number: 4 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASGQWCP*AESPDD
Trigger: ATCATCTGGTGATTCAGCGCATGGACACCACTGGCC...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCCTCTACATCAAAATGTaGAGCTTTGACACGACAGGT +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPLYIKM*SFDTTG
Trigger: ACCTGTCGTGTCAAAGCTGCACATTTTGATGTAGAG...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GGGCTTGTGGCTTCATCTGCTAGAGCATCCCAGCCGTCGTGGATTTCCTCCTTCGAAAGCTCAATTCCATaGTCCTCTTTCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLVASSARASQPSWISSFESSIP*SSFSLG
Trigger: GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTC...GAAGGAGGAAATCCACGACGGCTGGGATGCTCTAGCAGATGAAGCCACAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629104.1
CDS-3UTR GCA 90 bp GATGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGATGGATTATCTGAATaGCTAGGAGATGAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: DGLKQPGPLAWLPSPNVADGLSE*LGDESS
Trigger: TGAGCTTTCATCTCCTAGGCATTCAGATAATCCATC...TGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGTGTTCCAGCTGTTCTTaGACGTTGAGCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGCSSCS*TLSPLS
Trigger: TGACAAGGGGCTCAACGTGCAAGAACAGCTGGAACA...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACGATGGGGTGCCAAAGTaGAGGAGTGGTGACCCGAAT +
Preference number: 4 (lower is better)
Translates to: LPSQVRPMLASVLPHSQYDGVPK*RSGDPN
Trigger: ATTCGGGTCACCACTCCTGCACTTTGGCACCCCATC...GTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTACTTGACTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTTCCTGCCCCGACCATaGACTAAGGTCCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: LPSQVRPMLASVLPHSQYFLPRP*TKVLGT
Trigger: TGTTCCCAGGACCTTAGTGCATGGTCGGGGCAGGAA...GTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTACTTGACTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGCCCCTTCAAGTCCTATaGTTGTCCCCACCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVPLQVL*LSPPAC
Trigger: GCAAGCGGGTGGGGACAAGCATAGGACTTGAAGGGG...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ATAGCTTCCGGAACGGTGGGCATCCATATGTCGCCGGTCCCCATAATGGTGGTCCCCCACCTTTGTGATTaGAACAAGTTGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IASGTVGIHMSPVPIMVVPHLCD*NKLVSR
Trigger: CCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGG...GACCACCATTATGGGGACCGGCGACATATGGATGCCCACCGTTCCGGAAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp TGGAATCGTGAGGAGATTTCTGAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGAGGCATTCATGGTGCTaGCCAGGACACCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: WNREEISEKGVSEDLRLQRHSWC*PGHQQA
Trigger: TGCTTGCTGGTGTCCTGGGCAGCACCATGAATGCCT...CTGCAGTCTCAGATCCTCGCTCACCCCCTTCTCAGAAATCTCCTCACGATTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CTGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCAGGAATGATATGGTCTaGATGGTCTTTCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: LHQDPHLCDCNKLVSRPARNDMV*MVFPRP
Trigger: GGGCCTAGGAAAGACCATCCAGACCATATCATTCCT...GGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCAGGAGAGGAATGATATaGTCTGGATGGTCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPRRGMI*SGWSFL
Trigger: TAGGAAAGACCATCCAGACCATATCATTCCTCTCCT...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGCACTCCAGCTTTAGGATCGTCCGGCCAGTaGTGTCCATGCGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: LPPTYLPAQHHVLCTPALGSSGQ*CPCAES
Trigger: TGATTCAGCGCATGGACACCACTGGCCGGACGATCC...TAAAGCTGGAGTGCATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp TCTGAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGGGTGCAATGGGGGTAGAGTCCGCTTCTTTAATTTaGCCTCTTCCCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: SEKGVSEDLRLQGAMGVESASLI*PLPHLS
Trigger: TGACAGGTGGGGAAGAGGCCAAATTAAAGAAGCGGA...CTCTACCCCCATTGCACCCTGCAGTCTCAGATCCTCGCTCACCCCCTTCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CCCAACCCCACCCACAGGTTTCACATAATGAGGCCGAGTGTATCACTTCTCCCACCTGTCGCTTCCCCATaGTGGATTGTTGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: PNPTHRFHIMRPSVSLLPPVASP*WIVVAT
Trigger: GGTGGCAACAACAATCCACCATGGGGAAGCGACAGG...TGGGAGAAGTGATACACTCGGCCTCATTATGTGAAACCTGTGGGTGGGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCACCTGTCGCTTCCCCATaGTGGATTGTTGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPPVASP*WIVVAT
Trigger: GGTGGCAACAACAATCCACCATGGGGAAGCGACAGG...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCCTGGCCACACTACTCCCCGTGATTGCAACAAGTTaGTCAGCAGGCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HRNQKSTRDSSSLATLLPVIATS*SAGLPL
Trigger: CAGAGGCAGGCCTGCTGACCAACTTGTTGCAATCAC...GGGGAGTAGTGTGGCCAGGGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ACTGAAAGTTTCCCCCACTTGCTGGCACTACTGAACCCCACATTAGAAGCCTGTAGGACTGTGGCCAGGTaGCTCATGCAGTCACCGGAG +
Preference number: 4 (lower is better)
Translates to: TESFPHLLALLNPTLEACRTVAR*LMQSPE
Trigger: CTCCGGTGACTGCATGAGCCACCTGGCCACAGTCCT...ACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAGCAAGTGGGGGAAACTTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GTAGCCCATAGCGGGGCGGTGATCAGACATTCGTCGGAAATCCTGCTGGTGGTATTCCTCATCACTGTGTaGCCTAAGTGGAGACACAGG +
Preference number: 4 (lower is better)
Translates to: VAHSGAVIRHSSEILLVVFLITV*PKWRHR
Trigger: CCTGTGTCTCCACTTAGGCCACACAGTGATGAGGAA...TACCACCAGCAGGATTTCCGACGAATGTCTGATCACCGCCCCGCTATGGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CCCCATCTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGATCCTCACAGATTCCTaGGGCAGCTTCTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: PHLPTLKGSTSQPNLPLWILTDS*GSFSHS
Trigger: TGAATGGGAGAAGCTGCCCCAGGAATCTGTGAGGAT...CCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GATGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCACTGACAAGTGGATTTTaGTCTGTAGGATTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: DGLKQPGPLAWLPSPNVALTSGF*SVGFQC
Trigger: ACACTGAAATCCTACAGACCAAAATCCACTTGTCAG...TGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ATCTGGCCGATACTGCCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTCGCTGGTGCTGGGCCTaGGCTGCTGCTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: IWPILPFATSYGTESPKCRWCWA*AAAPAD
Trigger: GTCAGCAGGAGCAGCAGCCCAGGCCCAGCACCAGCG...ACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGGCAGTATCGGCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AGACATTCGTCGGAAATCCTGCTGGTGGTAATTTTGAGGCCTAAATTCATCGGAGAGCCGGAAGACCGCTaGTGCTGGGCCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RHSSEILLVVILRPKFIGEPEDR*CWAWAA
Trigger: AGCAGCCCAGGCCCAGCACCAGCGGTCTTCCGGCTC...TCCGATGAATTTAGGCCTCAAAATTACCACCAGCAGGATTTCCGACGAATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CTACTCTATTTCTTCAAGCTGTGCAAAGGGAAGGAAATGCAGCAGGAAGTGTTGTCCCCTCGCCCAACGTaGCAGCCCTCAGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LLYFFKLCKGKEMQQEVLSPRPT*QPSEEP
Trigger: CGGCTCCTCTGAGGGCTGCCACGTTGGGCGAGGGGA...CAACACTTCCTGCTGCATTTCCTTCCCTTTGCACAGCTTGAAGAAATAGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AGTCAAGTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCTGGCCTAAAGCAGCCTaGACCCTTGGCATGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SQVRPMLASVLPHSQYSVWPKAA*TLGMAP
Trigger: GGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCA...GACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTACTTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCGGTAGGAGGGGCTTGTaGCTTCATCTGCTAGAGCAT +
Preference number: 4 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASGRRGL*LHLLEH
Trigger: ATGCTCTAGCAGATGAAGCCACAAGCCCCTCCTACC...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACCGGCAGAAGGTAGGAGGGGCTTGTaGCTTCATCTGCTAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LGSVAASPEAFYLSPPAEGRRGL*LHLLEH
Trigger: ATGCTCTAGCAGATGAAGCCACAAGCCCCTCCTACC...TTCTGCCGGTGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000629104.1
3UTR CAA 72 bp TCCAGCTGTTCTTGCACGTTGAGCCCCTTGTCAGGTTaGTCGAGCTGTTTCAGTGCCTTTTTCACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSCSCTLSPLSG*SSCFSAFFTGL
Trigger: GAGGCCCGTGAAAAAGGCACTGAAACAGCTCGACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CCTCACCCCTGGGGTCTAGTAGTTCTCCTATTGAACTATAAGAATCTTTCTCTTGCTACGGGGGCCCCCTaGGGCTGCCCGAAAGTTAGG +
Preference number: 4 (lower is better)
Translates to: PHPWGLVVLLLNYKNLSLATGAP*GCPKVR
Trigger: CCTAACTTTCGGGCAGCCTCAGGGGGCCCCCGTAGC...AAGAGAAAGATTCTTATAGTTCAATAGGAGAACTACTAGACCCCAGGGGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCAGCTTCTTCAGAGGCTaGGTGACTCGATGCATTGCT +
Preference number: 4 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASSFFRG*VTRCIA
Trigger: AGCAATGCATCGAGTCACTCAGCCTCTGAAGAAGCT...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CATGTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCATTGTCTGCTTCGGTTTaGCCGCCTGACCCCATAAAC +
Preference number: 4 (lower is better)
Translates to: HVCYKSRLDNPKNCEGSALSASV*PPDPIN
Trigger: GTTTATGGGGTCAGGCGGTCAAACCGAAGCAGACAA...TGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGCACTCATATTCGGGCTCATTTaGGGGTGCCGGCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: LQICHRLIYQLSITCYALIFGLI*GCRLPT
Trigger: AGTCGGAAGCCGGCACCCTCAAATGAGCCCGAATAT...GAGTGCATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp CTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCCTCTCTGCCATGAGGTaGGGGTGGATAAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: LRIPALLTHSCCGSVHPGLSAMR*GWIKGR
Trigger: TCGTCCCTTTATCCACCCTCACCTCATGGCAGAGAG...GCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp CACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCCTGGCCACACTACTCCCCTTCGGATTTCTCCCTTaGTGGAACCATCCAGACGCT +
Preference number: 4 (lower is better)
Translates to: HRNQKSTRDSSSLATLLPFGFLP*WNHPDA
Trigger: AGCGTCTGGATGGTTCCATCAAGGGAGAAATCCGAA...GGGGAGTAGTGTGGCCAGGGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp GCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATCTGGACGACTGTGTCCGCTaGAGCCAAATTGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: ALLTHSCCGSVHPGASDLDDCVR*SQIDSQ
Trigger: CTGGGAATCAATTTGGCTTCAGCGGACACAGTCGTC...CAGATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp TCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTTTGGCCCGTTCTATaGTCTCCTCCTCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SYSCIADTQLLWISSPRRFWPVL*SPPPQS
Trigger: GGACTGTGGAGGAGGAGATCATAGAACGGGCCAAAA...GCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp CTGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCATATGGACAGGACCCTaGGATCGCTTTGATTTACTC +
Preference number: 4 (lower is better)
Translates to: LHQDPHLCDCNKLVSRPAIWTGP*DRFDLL
Trigger: GAGTAAATCAAAGCGATCTCAGGGTCCTGTCCATAT...GGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CCCCTTCTTCTCCAGACCCTTTCTGAGCAGCTTCAACAAGTAATCCGCTCGGGTGCTGTTCTTGCACGTTaGGCCCCTTGTCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PLLLQTLSEQLQQVIRSGAVLAR*APCQVC
Trigger: ACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGC...ACCCGAGCGGATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGAAGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGTTGATGTGCTCCTGATCTaGGTAGGCTTTAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: PLTQPTPQSSKTHAGISVDVLLI*VGFKAL
Trigger: GAGTGCCTTAAAGCCTACTCAGATCAGGAGCACATC...AACACTGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGCATCCAAAGGAGACCTATaGTCCAGGGGTGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: HTPNRRVFTSSEPGHLQASKGDL*SRGDLE
Trigger: TTCCAAGTCACCCCTGGATCATAGGTCTCCTTTGGA...TGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CCGATTTTCAGCAGGCAGTTCCGGGTGTGTTCCAGCTGTTCTTGCACGTTGAGCTCCAAAGGAGACCTATaGTCCAGGGGTGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: PIFSRQFRVCSSCSCTLSSKGDL*SRGDLE
Trigger: TTCCAAGTCACCCCTGGATCATAGGTCTCCTTTGGA...GCTCAACGTGCAAGAACAGCTGGAACACACCCGGAACTGCCTGCTGAAAATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACAGATCCCCTGTTCCTTaGCTGGGGAAACACATCCCA +
Preference number: 4 (lower is better)
Translates to: LPSQVRPMLASVLPHSQYRSPVP*LGKHIP
Trigger: TGGGATGTGTTTCCCCAGTCAAGGAACAGGGGATCT...GTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTACTTGACTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGCATCTGAAAGACCGCAGTaGTTAGCTTGGGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: HTPNRRVFTSSEPGHLQASERPQ*LAWGFT
Trigger: GGTGAAACCCCAAGCTAATCACTGCGGTCTTTCAGA...TGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CAGGTCCCAGCAGCCTCCATGCACCAGTTCCTGCCCCGACCATGCACTAAGGTCTTCAGTGTCATTGTGTaGCTTCCTAAATCAACTGTG +
Preference number: 4 (lower is better)
Translates to: QVPAASMHQFLPRPCTKVFSVIV*LPKSTV
Trigger: CACAGTTGATTTAGGAAGTCACACAATGACACTGAA...GACCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGGAGGCTGCTGGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CTGCCAGTCTCCTCGATCTGCATTACTGAAGTGTCTCTTGTTGGGGTGATTGTATGGGAGGCAGGCAAATaGGGCTTCCCCAGTCACGTC +
Preference number: 4 (lower is better)
Translates to: LPVSSICITEVSLVGVIVWEAGK*GFPSHV
Trigger: GACGTGACTGGGGAAGCCTCATTTGCCTGCCTCCCA...TACAATCACCCCAACAAGAGACACTTCAGTAATGCAGATCGAGGAGACTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627460.1
CDS-3UTR GCA 90 bp CCCTGGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGGCACAAAAATGGAGGTaGGCCATGGCTTCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: PWAPSCLYSQQHQSIIQGAQKWR*AMASKL
Trigger: CAGCTTAGAAGCCATGGCGCACCTCCATTTTTGTGC...CCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGCACTCTCTGCACTGGTaGCTTGTTCCTGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGHSLHW*LVPVHL
Trigger: AAGATGAACAGGAACAAGGCACCAGTGCAGAGAGTG...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACGCTCGGGCTTGTGCCTaGAAGTCATTCTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHARACA*KSFWGF
Trigger: GAACCCCCAGAATGACTTGCAGGCACAAGCCCGAGC...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GCTTCAACAAGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATGCTCGGGCTTGTGCCTaGAAGTCATTCTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: ASTSNPLGSVAASPEAFYARACA*KSFWGF
Trigger: GAACCCCCAGAATGACTTGCAGGCACAAGCCCGAGC...ATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACTTGTTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACATGCGCTCGGGCTTGTaGCTGCAAGTCATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHMRSGL*LQVILG
Trigger: CCCCAGAATGACTTGCAGGCACAAGCCCGAGCGCAT...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCATCTCTTGGGTGTCCATaGATCTGTGGGCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: SNPLGSVAASPEAFYLSPSLGCP*ICGPWE
Trigger: CTCCCATGGCCCACAGATGCATGGACACCCAAGAGA...TGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp CACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCCTGGCCACACTACTCCCCCAGTCACCGGAGCTTTaGTTCAGGACATGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: HRNQKSTRDSSSLATLLPQSPEL*FRTCVL
Trigger: TAGCACACATGTCCTGAAGCAAAGCTCCGGTGACTG...GGGGAGTAGTGTGGCCAGGGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp GTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTGGGTCGATAGCTTCCGGATGGCCAGGTGGCTCATaGAGTCACCGGAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VLVIRPLSGHVVGSIASGWPGGS*SHRSFA
Trigger: AGCAAAGCTCCGGTGACTGCATGAGCCACCTGGCCA...TCCGGAAGCTATCGACCCAACAACATGTCCAGAAAGAGGCCTTATGACCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp TCAACAAGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGCACTACCCAACTCTCTaGAGGGGCTCACCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: STSNPLGSVAASPEAFYLHYPTL*RGSPPS
Trigger: GGAAGGAGGTGAGCCCCTGCAGAGAGTTGGGTAGTG...CAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACTTGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCCACTTGATGAGGTACTaGATTTCACCTTCATCCTTT +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPHLMRY*ISPSSF
Trigger: AAAGGATGAAGGTGAAATCCAGTACCTCATCAAGTG...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGCACTCGACACACAGCTGTTGTaGATCAGTTCACCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LQICHRLIYQLSITCYALDTQLL*ISSPRR
Trigger: GCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTC...GAGTGCATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR CCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGTTCTGGACATGTTGTTaGGTCGATAGCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGFWTCC*VDSFRN
Trigger: GTTCCGGAAGCTATCGACCCAACAACATGTCCAGAA...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ATAGCTTCCGGAACGGTGGGCATCCATATGTCGCCGGTCCCCATAATGGTGGTCTTCTGGACATGTTGTTaGGTCGATAGCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: IASGTVGIHMSPVPIMVVFWTCC*VDSFRN
Trigger: GTTCCGGAAGCTATCGACCCAACAACATGTCCAGAA...GACCACCATTATGGGGACCGGCGACATATGGATGCCCACCGTTCCGGAAGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp GTGGTCTCGGTCACTGCTGTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTTCTCTGTGTCCCCGGTaGTCTCGGTCACTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: VVSVTAVLVIRPLSGHVVSLCPR*SRSLLY
Trigger: GTACAGCAGTGACCGAGACCACCGGGGACACAGAGA...AACAACATGTCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACCGAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp GTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTGGGTCGATAGCTTCCGGATCTCTGTGTCCCCGGTaGTCTCGGTCACTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: VLVIRPLSGHVVGSIASGSLCPR*SRSLLY
Trigger: GTACAGCAGTGACCGAGACCACCGGGGACACAGAGA...TCCGGAAGCTATCGACCCAACAACATGTCCAGAAAGAGGCCTTATGACCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp CATGTTGTTGGGTCGATAGCTTCCGGAACGGTGGGCATCCATATGTCGCCGGTCGATCCAGGGGTGACTTaGAATCGTGAGGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: HVVGSIASGTVGIHMSPVDPGVT*NREEIS
Trigger: AGAAATCTCCTCACGATTCCAAGTCACCCCTGGATC...GACCGGCGACATATGGATGCCCACCGTTCCGGAAGCTATCGACCCAACAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp GTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCAGCCAGAGAACTAGGCTGGAATaGGATGGGGTGCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: VRPMLASVLPHSQYSVSQRTRLE*DGVPKC
Trigger: GCACTTTGGCACCCCATCCCATTCCAGCCTAGTTCT...CTGGCTGACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CCCAACCCCACCCACAGGTTTCACATAATGAGGCCGAGTGTATCACTTCTCCCAGAAACCTACCTTCCCTaGCACAGTGGGAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PNPTHRFHIMRPSVSLLPETYLP*HSGKRR
Trigger: CCTCCTTTTCCCACTGTGCCAGGGAAGGTAGGTTTC...TGGGAGAAGTGATACACTCGGCCTCATTATGTGAAACCTGTGGGTGGGGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GCTTCAACAAGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATGGGATTCCAGTTCCCTaGCCACACTACTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: ASTSNPLGSVAASPEAFYGIPVP*PHYSPP
Trigger: AGGTGGGGAGTAGTGTGGCCAGGGAACTGGAATCCC...ATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACTTGTTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp AACACAAGCTTCCGGGACCCAGACCCTCATCTGGAAACCACACAGGCCAGCCCTAAGAAGCTCCATCTGTaGTTTCCTCATCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: NTSFRDPDPHLETTQASPKKLHL*FPHHCV
Trigger: CACACAGTGATGAGGAAACCACAGATGGAGCTTCTT...AGGGCTGGCCTGTGTGGTTTCCAGATGAGGGTCTGGGTCCCGGAAGCTTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ACCGGCTACTGTAGGATCAGACCAAAAATATCCACGTGTTTGGTGACTCTTACTAGCAGCCTGGACCCTTaGCATGGCTCCCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: TGYCRIRPKISTCLVTLTSSLDP*HGSPRP
Trigger: TGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCT...AGTAAGAGTCACCAAACACGTGGATATTTTTGGTCTGATCCTACAGTAGCCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCAGCAAAGGTTGGCACCTaGTGTCTCACAGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPAKVGT*CLTAFC
Trigger: GCAAAAGGCTGTGAGACACCAGGTGCCAACCTTTGC...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCTCATCGTACTACTGGTaGCATTGTACTGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPSSYYW*HCTEVK
Trigger: CTTTACTTCAGTACAATGCCACCAGTAGTACGATGA...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR CAA 72 bp ACCACAGCCACATCTGCTTCATTCGGGGGATCCAACTaGGCATGTCTTGGTAAAGGCATTCATGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TTATSASFGGSN*ACLGKGIHGAA
Trigger: GGCAGCACCATGAATGCCTTTACCAAGACATGCCAAGTTGGATCCCCCGAATGAAGCAGATGTGGCTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CAA 72 bp CGGGTGTGTTCCAGCTGTTCTTGCACGTTGAGCCCCTaGTCAGGTTTGTCGAGCTGTTTCAGTGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RVCSSCSCTLSP*SGLSSCFSAFF
Trigger: GAAAAAGGCACTGAAACAGCTCGACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGCTGGAACACACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
3UTR CAA 72 bp TGCTCTTCGTATTCCTGCATTGCTGACACACAGCTGTaGTGGATCAGTTCACCCAGGCGCTTCAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: CSSYSCIADTQL*WISSPRRFRSA
Trigger: GGCAGATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR TCA 90 bp CCCTGGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGCTGTTTATTCAACTCTaGAGCCAGCTCCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PWAPSCLYSQQHQSIIQGLFIQL*SQLLLA
Trigger: TGCCAACAGGAGCTGGCTTCAGAGTTGAATAAACAG...CCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp GTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCAGCCAGCTGTTTCTGAAGGGCTaGCATCTCCACCCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: VRPMLASVLPHSQYSVSQLFLKG*HLHPEN
Trigger: ATTCTCAGGGTGGAGATGTCAGCCCTTCAGAAACAG...CTGGCTGACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCACTGTTTCTGAAGGGCTaGCATCTCCACCCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPLFLKG*HLHPEN
Trigger: ATTCTCAGGGTGGAGATGTCAGCCCTTCAGAAACAG...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATCTGTTCGGATTTCTCCCTTaGTGGAACCATCCAGACGCT +
Preference number: 4 (lower is better)
Translates to: ALLTHSCCGSVHPGASDLFGFLP*WNHPDA
Trigger: AGCGTCTGGATGGTTCCATCAAGGGAGAAATCCGAA...CAGATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp CTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGCACTCCAGACCCATCTGCATTaGAGTGGTCCAGTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LQICHRLIYQLSITCYALQTHLH*SGPVPV
Trigger: AACAGGCACTGGACCACTTCAATGCAGATGGGTCTG...GAGTGCATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp CCCCATCTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGGAACTCCGGATATCTTaGTTGTTGGACCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PHLPTLKGSTSQPNLPLWELRIS*LLDLSF
Trigger: AAAGGAGAGGTCCAACAATCAAGATATCCGGAGTTC...CCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCATCCTCCTCCAGAGTTTaGTGTGCTCCTGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPSSSRV*CAPDLS
Trigger: ACTCAGATCAGGAGCACATCAAACTCTGGAGGAGGA...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCAGGGTGAAGGTTGTGTaGGGTATGGGACTGAGATAT +
Preference number: 4 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASRVKVV*GMGLRY
Trigger: ATATCTCAGTCCCATACCTCACACAACCTTCACCCT...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp ACCCTTGTTCACGTGCAGGTTTTAGGTGATGCTAACTCCCTCTTTCTCAACCTGAGAGCGGTAATGGTCTaGGGGTCCCTGGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: TLVHVQVLGDANSLFLNLRAVMV*GSLAMV
Trigger: TACCATGGCCAGGGACCCTCAGACCATTACCGCTCT...CAGGTTGAGAAAGAGGGAGTTAGCATCACCTAAAACCTGCACGTGAACAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp AATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTACCCGAGGAGAGCGGTAATGGTCTaGGGGTCCCTGGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: NSMLLFQPGHFVFLLYPRRAVMV*GSLAMV
Trigger: TACCATGGCCAGGGACCCTCAGACCATTACCGCTCT...CCTCGGGTAAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CTGCCAGTCTCCTCGATCTGCATTACTGAAGTGTCTCTTGTTGGGGTGATTGTAAGAGCGGTAATGGTCTaGGGGTCCCTGGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: LPVSSICITEVSLVGVIVRAVMV*GSLAMV
Trigger: TACCATGGCCAGGGACCCTCAGACCATTACCGCTCT...TACAATCACCCCAACAAGAGACACTTCAGTAATGCAGATCGAGGAGACTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR TCA 90 bp CCAGTTTATCTGTGTGGAAAGAGCGGTAATGGTCTGAGGGTCCCTGGCCATGGTTCCAAAGGAGACCTATaGTCCAGGGGTGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: PVYLCGKSGNGLRVPGHGSKGDL*SRGDLE
Trigger: TTCCAAGTCACCCCTGGATCATAGGTCTCCTTTGGA...ACCATGGCCAGGGACCCTCAGACCATTACCGCTCTTTCCACACAGATAAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR TCA 90 bp GTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCAGCCAGCCCTCCTTTCATTCCTaGAGGACACTACCCAACTCT +
Preference number: 4 (lower is better)
Translates to: VRPMLASVLPHSQYSVSQPSFHS*RTLPNS
Trigger: AGAGTTGGGTAGTGTCCTTCAGGAATGAAAGGAGGG...CTGGCTGACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp ACTGAAAGTTTCCCCCACTTGCTGGCACTACTGAACCCCACATTAGAAGCCTGTATGCAGGACCTCTGGTaGCTCCTTTGCCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TESFPHLLALLNPTLEACMQDLW*LLCPSF
Trigger: AAAGGAGGGGCAAAGGAGTCACCAGAGGTCCTGCAT...ACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAGCAAGTGGGGGAAACTTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCATCGGGCTGAGGAATGACTaGAAGGAGAGTGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AWTLTGTLYVQVSYSVSIGLRND*KESEPR
Trigger: CCGGGGCTCACTCTCCTTTCAGTCATTCCTCAGCCC...GATGGAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCCCATCTGTCCCCAGATaGGTGGGGCACAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: NHGLESVLSARSSICGFLPSVPR*VGHRWP
Trigger: AGGCCATCTGTGCCCCACTCATCTGGGGACAGATGG...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGTGCTGTTCGACTCGCTaGCATGTCCACTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVCCSTR*HVHFLD
Trigger: ATCCAGGAAGTGGACATGGCAGCGAGTCGAACAGCA...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCACAGAAGATTCAGAGCTaGTGTTCGACTCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPQKIQS*CSTRCH
Trigger: ATGGCAGCGAGTCGAACAGCAGCTCTGAATCTTCTG...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACCAGCTCAGCATCACGTaGTATGCACTCCAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHQLSIT*YALQPF
Trigger: GAACGGCTGGAGTGCATAGCACGTGATGCTGAGCTG...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp TGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGTGCTCTTCGTATTCCTaGATTGCTGACACACAGCTG +
Preference number: 4 (lower is better)
Translates to: CTRPTEGFSPALSLDTYRCSSYS*IADTQL
Trigger: CAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCA...CCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp CCAGTTTATCTGTGTGGAAAGAGCGGTAATGGTCTGAGGGTCCCTGGCCATGGTTGTTCCAGCTGTTCTTaGACGTTGAGCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PVYLCGKSGNGLRVPGHGCSSCS*TLSPLS
Trigger: TGACAAGGGGCTCAACGTGCAAGAACAGCTGGAACA...ACCATGGCCAGGGACCCTCAGACCATTACCGCTCTTTCCACACAGATAAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCATGTTCCAGCTGTTCTTaGACGTTGAGCCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPCSSCS*TLSPLS
Trigger: TGACAAGGGGCTCAACGTGCAAGAACAGCTGGAACA...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCAACTTTCTTTCCCTCTaGCAGTCTCCTCGATCTGCA +
Preference number: 4 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASNFLSL*QSPRSA
Trigger: TGCAGATCGAGGAGACTGGCAGAGGGAAAGAAAGTT...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ACCCTTGTTCACGTGCAGGTTTTAGGTGATGCTAACTCCCTCTTTCTCAACCTGCCATGCACCAGTTCCTaGCCCGACCATGCACTAAGG +
Preference number: 4 (lower is better)
Translates to: TLVHVQVLGDANSLFLNLPCTSS*PDHALR
Trigger: CCTTAGTGCATGGTCGGGGCAGGAACTGGTGCATGG...CAGGTTGAGAAAGAGGGAGTTAGCATCACCTAAAACCTGCACGTGAACAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp GCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCATCGTTGGTCAGCAGGCCTaGCTCTGCATCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AWTLTGTLYVQVSYSVSIVGQQA*LCIPFS
Trigger: GGAGAAGGGGATGCAGAGGCAGGCCTGCTGACCAAC...GATGGAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp GTGCCTGTCGCTTCCCCATGGTGGATTGTTGTTGCCACCACCATAGTTGAACTTCACCACAGCCACATCTaGTTCATTCGGGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: VPVASPWWIVVATTIVELHHSHI*FIRGIQ
Trigger: TTGGATCCCCCGAATGAAGCAGATGTGGCTGTGGTG...AAGTTCAACTATGGTGGTGGCAACAACAATCCACCATGGGGAAGCGACAGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCCTACAATGTATAAAATaGAAAGTACACTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPLQCIK*KVHWMG
Trigger: GCCCATCCAGTGTACTTTGCATTTTATACATTGTAG...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATCAGCATCACGTGCTATaGACTCCAGCTTTATCTCCC +
Preference number: 4 (lower is better)
Translates to: PALLTHSCCGSVHPGASDQHHVL*TPALSP
Trigger: GGGAGATAAAGCTGGAGTGCATAGCACGTGATGCTG...ATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637789.1
CDS-3UTR CCA 90 bp CTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACCGGCAGAATCCGCTTCTTTAATTTaGCCTCTTCCCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: LGSVAASPEAFYLSPPAESASLI*PLPHLS
Trigger: TGACAGGTGGGGAAGAGGCCAAATTAAAGAAGCGGA...TTCTGCCGGTGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
ENST00000637789.1
CDS-3UTR CCA 90 bp ACCGGCTACTGTAGGATCAGACCAAAAATATCCACGTGTTTGGTGACTCTTACTTCAGAGAGTCCCGGCTaGAGCCTGAGGCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: TGYCRIRPKISTCLVTLTSESPG*SLRPLD
Trigger: GTCCAGAGGCCTCAGGCTCCAGCCGGGACTCTCTGA...AGTAAGAGTCACCAAACACGTGGATATTTTTGGTCTGATCCTACAGTAGCCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CTGCTGGTGGTAATTTTGAGGCCTAAATTCATCGGATCTCCTCCGCTTGGAGTCGTCGCTTCCCCATGGTaGATTGTTGTTGCCACCACC +
Preference number: 4 (lower is better)
Translates to: LLVVILRPKFIGSPPLGVVASPW*IVVATT
Trigger: GGTGGTGGCAACAACAATCCACCATGGGGAAGCGAC...GACTCCAAGCGGAGGAGATCCGATGAATTTAGGCCTCAAAATTACCACCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGCATAAGGCCTCTTTCTaGACATGTTGTTGGGTCGAT +
Preference number: 4 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGHKASF*TCCWVD
Trigger: ATCGACCCAACAACATGTCCAGAAAGAGGCCTTATG...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GTAGCCCATAGCGGGGCGGTGATCAGACATTCGTCGGAAATCCTGCTGGTGGTACATAAGGCCTCTTTCTaGACATGTTGTTGGGTCGAT +
Preference number: 4 (lower is better)
Translates to: VAHSGAVIRHSSEILLVVHKASF*TCCWVD
Trigger: ATCGACCCAACAACATGTCCAGAAAGAGGCCTTATG...TACCACCAGCAGGATTTCCGACGAATGTCTGATCACCGCCCCGCTATGGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp TGTAGCTTTCCTTCTCACCACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCTCTCTGTGTCCCCGGTaGTCTCGGTCACTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: CSFPSHHRNQKSTRDSSSSLCPR*SRSLLY
Trigger: GTACAGCAGTGACCGAGACCACCGGGGACACAGAGA...GGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTGGTGAGAAGGAAAGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTTCTCTGTGTCCCCGGTaGTCTCGGTCACTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLSLCPR*SRSLLY
Trigger: GTACAGCAGTGACCGAGACCACCGGGGACACAGAGA...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp GCTTCAACAAGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATAGGCCAGAACTAGGCTaGAATGGGATGGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: ASTSNPLGSVAASPEAFYRPELG*NGMGCQ
Trigger: TTGGCACCCCATCCCATTCCAGCCTAGTTCTGGCCT...ATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACTTGTTGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCGGGGGATCCAACTTaGCATGTCTTGGTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LPSQVRPMLASVLPHSQYSGDPT*HVLVKA
Trigger: TGCCTTTACCAAGACATGCCAAGTTGGATCCCCCGA...GTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTACTTGACTGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCACTGTGTGGCCTAAGTaGAGACACAGGCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GDESSIPCSSFSLGTLFSTVWPK*RHRPCP
Trigger: AGGGCAGGGCCTGTGTCTCCACTTAGGCCACACAGT...GGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp AGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCAAGCGTGCAAAGTGTTTaGGCTTCCCTTCGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SNPLGSVAASPEAFYLSPSVQSV*ASLRRA
Trigger: AGCCCTTCGAAGGGAAGCCCAAACACTTTGCACGCT...TGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp TGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCTGCTCCTGCTGACAAGTaGATTTTGGTCTGTAGGATT +
Preference number: 4 (lower is better)
Translates to: CTRTPTFVIATSWSAGLPAPADK*ILVCRI
Trigger: AATCCTACAGACCAAAATCCACTTGTCAGCAGGAGC...AGGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTACCCGAGGGCATCCCAGCCGTCGTaGATTTCCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NSMLLFQPGHFVFLLYPRASQPS*ISSFQE
Trigger: CTCCTGGAAGGAGGAAATCCACGACGGCTGGGATGC...CCTCGGGTAAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000629104.1
CDS-3UTR TCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACTTGTCTGCTTCGGTTTaGCCGCCTGACCCCATAAAC +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHLSASV*PPDPIN
Trigger: GTTTATGGGGTCAGGCGGTCAAACCGAAGCAGACAA...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp TGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGTTTCTCTTTCCACGCTaGGTCTTCGGCTGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: CTRPTEGFSPALSLDTYRFLFPR*VFGCFL
Trigger: TAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAA...CCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp AGGCGCTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGGGAATTTCTTTCCAATaGGGGCTTCATCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RRFRSATDLSTSSASRAMGISFQ*GLHLPS
Trigger: GCTGGGAAGATGAAGCCCTCATTGGAAAGAAATTCC...CATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp GGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACCGGCAGAATTTAGTCAGAGTCAAAGATaGCGACTGTGTCCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSVAASPEAFYLSPPAEFSQSQR*RLCPLK
Trigger: CTTCAGCGGACACAGTCGTCATCTTTGACTCTGACT...AAATTCTGCCGGTGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp ACTGAAAGTTTCCCCCACTTGCTGGCACTACTGAACCCCACATTAGAAGCCTGTTCATCCCAGTCCTTGTaGGGACGCTCTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TESFPHLLALLNPTLEACSSQSL*GRSSSS
Trigger: AGAGCTAGAAGAGCGTCCTCACAAGGACTGGGATGA...ACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAGCAAGTGGGGGAAACTTTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCCTGGCCACACTACTCCCCTTTGTTCCTCTGGAATaGTCTCATCCCAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: HRNQKSTRDSSSLATLLPFVPLE*SHPSPC
Trigger: ACAAGGACTGGGATGAGATCATTCCAGAGGAACAAA...GGGGAGTAGTGTGGCCAGGGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CTGCTGGTGGTAATTTTGAGGCCTAAATTCATCGGATCTCCTCCGCTTGGAGTCCCTATGATCCAGGGGTaGCTTGGAATCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LLVVILRPKFIGSPPLGVPMIQG*LGIVRR
Trigger: TCTCCTCACGATTCCAAGTCACCCCTGGATCATAGG...GACTCCAAGCGGAGGAGATCCGATGAATTTAGGCCTCAAAATTACCACCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR TCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGTATCCACGTGTTTGGTaGCTCTTACTCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGYPRVW*LLLSPL
Trigger: TAAAGGAGAGAGTAAGAGTCACCAAACACGTGGATA...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp ATGCAACTTTCAGACACACCAGGCCAGAATGTCTGCAGCACAGCGTGCAAAGTGGACCTAGCGCAATACTaGAAGTTTCCCCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: MQLSDTPGQNVCSTACKVDLAQY*KFPPLA
Trigger: AGCAAGTGGGGGAAACTTTCAGTATTGCGCTAGGTC...CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGGTGTGTCTGAAAGTTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp ACCCTTGTTCACGTGCAGGTTTTAGGTGATGCTAACTCCCTCTTTCTCAACCTGGGTTTTCACCAGCTCTaGGCCTGGACACTTACAGGC +
Preference number: 4 (lower is better)
Translates to: TLVHVQVLGDANSLFLNLGFHQL*AWTLTG
Trigger: GCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACC...CAGGTTGAGAAAGAGGGAGTTAGCATCACCTAAAACCTGCACGTGAACAAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GTGCCTGTCGCTTCCCCATGGTGGATTGTTGTTGCCACCACCATAGTTGAACTTCCCTCCTTTCATTCCTaGAGGACACTACCCAACTCT +
Preference number: 4 (lower is better)
Translates to: VPVASPWWIVVATTIVELPSFHS*RTLPNS
Trigger: AGAGTTGGGTAGTGTCCTTCAGGAATGAAAGGAGGG...AAGTTCAACTATGGTGGTGGCAACAACAATCCACCATGGGGAAGCGACAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp GGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCCTGTCTGTCCGGCTCTaGAAGACCGCAGTGATTAGC +
Preference number: 4 (lower is better)
Translates to: GDESSIPCSSFSLGTLFSLSVRL*KTAVIS
Trigger: GCTAATCACTGCGGTCTTTCAGAGCCGGACAGACAG...GGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp TCTGAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGGGTGCAATGGGGGTAGAGTTCAGTGTCATTGTGTaGCTTCCTAAATCAACTGTG +
Preference number: 4 (lower is better)
Translates to: SEKGVSEDLRLQGAMGVEFSVIV*LPKSTV
Trigger: CACAGTTGATTTAGGAAGTCACACAATGACACTGAA...CTCTACCCCCATTGCACCCTGCAGTCTCAGATCCTCGCTCACCCCCTTCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp GCAATACCCTGGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAGAAGATTCAGAGCTaGTGTTCGACTCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: AIPWAPSCLYSQQHQSIIQKIQS*CSTRCH
Trigger: ATGGCAGCGAGTCGAACAGCAGCTCTGAATCTTCTG...TATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGGTATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp TGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCTCCCTTCACTTTCTGTTaGTGTAAGGATTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: CTRTPTFVIATSWSAGLPPFTFC*CKDSSL
Trigger: GAGTGAAGAATCCTTACAGCAACAGAAAGTGAAGGG...AGGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp CTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATCTGCCACCGCCCTTCACTTTCTGTTaGTGTAAGGATTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: LTHSCCGSVHPGASDLPPPFTFC*CKDSSL
Trigger: GAGTGAAGAATCCTTACAGCAACAGAAAGTGAAGGG...CGGTGGCAGATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp CTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACCGGCAGAAATTGAAGTGGTCCAGTaGCTGTTTTCGGATTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGSVAASPEAFYLSPPAEIEVVQ*LFSDFS
Trigger: GGAGAAATCCGAAAACAGGCACTGGACCACTTCAAT...TTCTGCCGGTGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCAGAACCTTCGGATCTCTaGATCAGTAAATCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPEPSDL*ISKSLH
Trigger: GTGGAGGGATTTACTGATGCAGAGATCCGAAGGTTC...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCATGCTCTTCGTATTCCTaGATTGCTGACACACAGCTG +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPCSSYS*IADTQL
Trigger: CAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCA...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCAGAAAGCTCAATTCCATaGTCCTCTTTCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SNPLGSVAASPEAFYLSPESSIP*SSFSLG
Trigger: GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTC...TGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
CDS-3UTR GCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTTCTCTTGGGTGTCCATaGATCTGTGGGCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLSLGCP*ICGPWE
Trigger: CTCCCATGGCCCACAGATGCATGGACACCCAAGAGA...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCAAACTTTCTTTCCCTCTaGCAGTCTCCTCGATCTGCA +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPNFLSL*QSPRSA
Trigger: TGCAGATCGAGGAGACTGGCAGAGGGAAAGAAAGTT...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp TGTAGCTTTCCTTCTCACCACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCTCTGAGACTGCAGGGTaGAATGGGGGTAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CSFPSHHRNQKSTRDSSSSETAG*NGGRGC
Trigger: ACAGCCTCTACCCCCATTGCACCCTGCAGTCTCAGA...GGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTGGTGAGAAGGAAAGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CTGCCAGTCTCCTCGATCTGCATTACTGAAGTGTCTCTTGTTGGGGTGATTGTATCTGAGACTGCAGGGTaGAATGGGGGTAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPVSSICITEVSLVGVIVSETAG*NGGRGC
Trigger: ACAGCCTCTACCCCCATTGCACCCTGCAGTCTCAGA...TACAATCACCCCAACAAGAGACACTTCAGTAATGCAGATCGAGGAGACTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR GCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCCCCCTTCAAGTCCTATaGTTGTCCCCACCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: NHGLESVLSARSSICGFLPLQVL*LSPPAC
Trigger: GCAAGCGGGTGGGGACAAGCATAGGACTTGAAGGGG...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ATCTGGCCGATACTGCCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTCACACAGGCCAGCCCTaGGATGCTCTGTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: IWPILPFATSYGTESPKCHTGQP*DALCSR
Trigger: CCTGCTACACAGAGCATCGCAGGGCTGGCCTGTGTG...ACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGGCAGTATCGGCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ACTGAAAGTTTCCCCCACTTGCTGGCACTACTGAACCCCACATTAGAAGCCTGTGCTTCAGGACATGTGTaGTACAAGTCCAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TESFPHLLALLNPTLEACASGHV*YKSRLD
Trigger: GTCCAGCCTGGACTTGTAGCACACATGTCCTGAAGC...ACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAGCAAGTGGGGGAAACTTTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp AGGCGCTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGTGCACTTCGGATCTCTaGATCAGTAAATCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RRFRSATDLSTSSASRAMCTSDL*ISKSLH
Trigger: GTGGAGGGATTTACTGATGCAGAGATCCGAAGTGCA...CATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGGAACTGTCCTCCTCTTaGCTTTTGTCCTTATTTCTC +
Preference number: 4 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGELSSS*LLSLFL
Trigger: GAGAAATAAGGACAAAAGCCAAGAGGAGGACAGTTC...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTCTGGCCTCTTCTTTTTaGGCTCCCACTCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLLASSF*APTLRP
Trigger: GGGTCTGAGAGTGGGAGCCCAAAAAGAAGAGGCCAG...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp AACACAAGCTTCCGGGACCCAGACCCTCATCTGGAAACCACACAGGCCAGCCCTCACTTGATGAGGTACTaGATTTCACCTTCATCCTTT +
Preference number: 4 (lower is better)
Translates to: NTSFRDPDPHLETTQASPHLMRY*ISPSSF
Trigger: AAAGGATGAAGGTGAAATCCAGTACCTCATCAAGTG...AGGGCTGGCCTGTGTGGTTTCCAGATGAGGGTCTGGGTCCCGGAAGCTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp CCCCATCTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCACTACGTTAATCTCTaGTGCCCAGATTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: PHLPTLKGSTSQPNLPLWHYVNL*CPDFKL
Trigger: GAGTTTGAAATCTGGGCACCAGAGATTAACGTAGTG...CCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp CACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGCATGCCTCTTGTTCCTTTaGCAAGAGCCTTGTAATTCC +
Preference number: 4 (lower is better)
Translates to: HTPNRRVFTSSEPGHLQACLLFL*QEPCNS
Trigger: GGAATTACAAGGCTCTTGCCAAAGGAACAAGAGGCA...TGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp CCCCTTCTTCTCCAGACCCTTTCTGAGCAGCTTCAACAAGTAATCCGCTCGGGTTCCGCTTCTTTAATTTaGCCTCTTCCCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: PLLLQTLSEQLQQVIRSGSASLI*PLPHLS
Trigger: TGACAGGTGGGGAAGAGGCCAAATTAAAGAAGCGGA...ACCCGAGCGGATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGAAGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
ENST00000637789.1
CDS-3UTR CCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACCCTCATCCTCTCCAATaGGGACAGGTTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHPHPLQ*GQVHFL
Trigger: CAGGAAGTGAACCTGTCCCCATTGGAGAGGATGAGG...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CCCTACCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAATTGTAGTTATCTCTTaGGTGTCCATGCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: PYPSLSLLPSQVRPMLASIVVIS*VSMHLW
Trigger: CCACAGATGCATGGACACCCAAGAGATAACTACAAT...TGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGGTAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GTCGCTTCCCCATGGTGGATTGTTGTTGCCACCACCATAGTTGAACTTTCTTTCCGGATCTCCTCCGCTTaGAGTCATGATGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VASPWWIVVATTIVELSFRISSA*SHDGAC
Trigger: ACAGGCACCATCATGACTCCAAGCGGAGGAGATCCG...GAAAGAAAGTTCAACTATGGTGGTGGCAACAACAATCCACCATGGGGAAGCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp TGCTGTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTGGGTCGATAGCTTCCGGATCTCCTCCGCTTaGAGTCATGATGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: CCTGHKASFWTCCWVDSFRISSA*SHDGAC
Trigger: ACAGGCACCATCATGACTCCAAGCGGAGGAGATCCG...GAAGCTATCGACCCAACAACATGTCCAGAAAGAGGCCTTATGACCAGTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp TGGAATCGTGAGGAGATTTCTGAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGGATCCAGGGGTGACTTaGAATCGTGAGGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: WNREEISEKGVSEDLRLQDPGVT*NREEIS
Trigger: AGAAATCTCCTCACGATTCCAAGTCACCCCTGGATC...CTGCAGTCTCAGATCCTCGCTCACCCCCTTCTCAGAAATCTCCTCACGATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp AGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCAGAGATGAAGCAGTTGTaGAAGCTGTTGCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SNPLGSVAASPEAFYLSPEMKQL*KLLPSL
Trigger: GAGAGAGGGCAACAGCTTCCACAACTGCTTCATCTC...TGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp GCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCATCCCTTCCCTGGCACAGTaGGAAAAGGAGGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: AWTLTGTLYVQVSYSVSIPSLAQ*EKEAHS
Trigger: TGAGTGGGCCTCCTTTTCCCACTGTGCCAGGGAAGG...GATGGAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp TGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGGCTCCTGCTGACAAGTaGATTTTGGTCTGTAGGATT +
Preference number: 4 (lower is better)
Translates to: CTRPTEGFSPALSLDTYRAPADK*ILVCRI
Trigger: AATCCTACAGACCAAAATCCACTTGTCAGCAGGAGC...CCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ATGTACAAAGACAGTGTGGGAAAAATTAGTGTTGGCAGAGATGAAGCAGTTGTGCCTGGACCCTTGGCATaGCTCCCCTCGCCCAACGTG +
Preference number: 4 (lower is better)
Translates to: MYKDSVGKISVGRDEAVVPGPLA*LPSPNV
Trigger: CACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGG...CACAACTGCTTCATCTCTGCCAACACTAATTTTTCCCACACTGTCTTTGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CAA 72 bp ATGAGGCCGAGTGTATCACTTCTCCCAAGAACACATTaGAGGGGTGTACCTGCTCCCCTTCAAGTCCTATGC +
Preference number: 4 (lower is better)
Translates to: MRPSVSLLPRTH*RGVPAPLQVLC
Trigger: GCATAGGACTTGAAGGGGAGCAGGTACACCCCTCAAATGTGTTCTTGGGAGAAGTGATACACTCGGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp ACAAGGTACTCCAAGGAATGTGAAACAGATCATGATTTGCACAAACAGTACATTGCTACGGGGGCCCCCTaGGGCTGCCCGAAAGTTAGG +
Preference number: 4 (lower is better)
Translates to: TRYSKECETDHDLHKQYIATGAP*GCPKVR
Trigger: CCTAACTTTCGGGCAGCCTCAGGGGGCCCCCGTAGC...AATGTACTGTTTGTGCAAATCATGATCTGTTTCACATTCCTTGGAGTACCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000627622.1
ENST00000629346.2
CDS-3UTR TCA 90 bp CTTAGAGGCTTTATTACTTCATCACTAACAAGGTACTCCAAGGAATGTGAAACAGCTACGGGGGCCCCCTaGGGCTGCCCGAAAGTTAGG +
Preference number: 4 (lower is better)
Translates to: LRGFITSSLTRYSKECETATGAP*GCPKVR
Trigger: CCTAACTTTCGGGCAGCCTCAGGGGGCCCCCGTAGC...TGTTTCACATTCCTTGGAGTACCTTGTTAGTGATGAAGTAATAAAGCCTCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000627622.1
ENST00000629346.2
CDS-3UTR TCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACTCTTCAGAGGCTGAGTaGCTCGATGCATTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHSSEAE*LDALLC
Trigger: ACACAGCAATGCATCGAGTCACTCAGCCTCTGAAGA...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCTGCTCACTTTCCGACTaGCTGCCTGAGTCTGAACCC +
Preference number: 4 (lower is better)
Translates to: NHGLESVLSARSSICGFLCSLSD*LPESEP
Trigger: GGGTTCAGACTCAGGCAGTCAGTCGGAAAGTGAGCA...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACTTCGGTTTGACCGCCTaGCCCCATAAACATCAGGAT +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHFGLTA*PHKHQD
Trigger: ATCCTGATGTTTATGGGGTCAGGCGGTCAAACCGAA...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCCTGGCCACACTACTCCCCTTCCTGTTCATCTTCTaGGGGTTCCTGTTTCCATTT +
Preference number: 4 (lower is better)
Translates to: HRNQKSTRDSSSLATLLPFLFIF*GFLFPF
Trigger: AAATGGAAACAGGAACCCTCAGAAGATGAACAGGAA...GGGGAGTAGTGTGGCCAGGGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCCAGGTAGGAGAGGAATaGTATGGTCTGGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: LRIPALLTHSCCGSVHPGQVGEE*YGLDGL
Trigger: AAGACCATCCAGACCATATCATTCCTCTCCTACCTG...GCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp CTGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCGCCTATGGTTGGACTTaGAATCAATCAGAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: LHQDPHLCDCNKLVSRPAAYGWT*NQSEFY
Trigger: ATAAAACTCTGATTGATTTCAAGTCCAACCATAGGC...GGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp TGTAGCTTTCCTTCTCACCACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCCAGACCCATCTGCATTaGAGTGGTCCAGTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: CSFPSHHRNQKSTRDSSSQTHLH*SGPVPV
Trigger: AACAGGCACTGGACCACTTCAATGCAGATGGGTCTG...GGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTGGTGAGAAGGAAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTAGACGACTGTGTCCGCTaGAGCCAAATTGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLDDCVR*SQIDSQ
Trigger: CTGGGAATCAATTTGGCTTCAGCGGACACAGTCGTC...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CCCCTTCTTCTCCAGACCCTTTCTGAGCAGCTTCAACAAGTAATCCGCTCGGGTTCTATATCCATTTCCTaGGGTTCTGATTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PLLLQTLSEQLQQVIRSGSISIS*GSDSSP
Trigger: AGGGGAGGAATCAGAACCTCAGGAAATGGATATAGA...ACCCGAGCGGATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGAAGAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTTCATCCCAGTCCTTGTaGGGACGCTCTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLSSQSL*GRSSSS
Trigger: AGAGCTAGAAGAGCGTCCTCACAAGGACTGGGATGA...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATCTGTTTGTTCCTCTGGAATaGTCTCATCCCAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: ALLTHSCCGSVHPGASDLFVPLE*SHPSPC
Trigger: ACAAGGACTGGGATGAGATCATTCCAGAGGAACAAA...CAGATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp TGGAATCGTGAGGAGATTTCTGAGAAGGGGGTGAGCGAGGATCTGAGACTGCAGTCTCCAGACCCTTTCTaGGCAGCTTCAACAAGTAAT +
Preference number: 4 (lower is better)
Translates to: WNREEISEKGVSEDLRLQSPDPF*AASTSN
Trigger: ATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGA...CTGCAGTCTCAGATCCTCGCTCACCCCCTTCTCAGAAATCTCCTCACGATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CATGTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCATCTCCTTACATATGCTaGATGTCTCCTGGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: HVCYKSRLDNPKNCEGSASPYIC*MSPGPD
Trigger: ATCTGGACCAGGAGACATTCAGCATATGTAAGGAGA...TGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTGCTGTTCTTGCACGTTaGGCCCCTTGTCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLAVLAR*APCQVC
Trigger: ACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGC...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp TGCTGTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTGGGTCGATAGCTTCCCTATGATCCAGGGGTaGCTTGGAATCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: CCTGHKASFWTCCWVDSFPMIQG*LGIVRR
Trigger: TCTCCTCACGATTCCAAGTCACCCCTGGATCATAGG...GAAGCTATCGACCCAACAACATGTCCAGAAAGAGGCCTTATGACCAGTACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR TCA 90 bp GTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCAAGCTATCCACGTGTTTGGTaGCTCTTACTCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: VCYKSRLDNPKNCEGSASYPRVW*LLLSPL
Trigger: TAAAGGAGAGAGTAAGAGTCACCAAACACGTGGATA...GCTTGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CTGGCACTACTGAACCCCACATTAGAAGCCTGTTCACTGCCTGCACCAGGACCCTCCATCATGTCAGAGTaGACCAAATCAACCAAATCA +
Preference number: 4 (lower is better)
Translates to: LALLNPTLEACSLPAPGPSIMSE*TKSTKS
Trigger: TGATTTGGTTGATTTGGTTCACTCTGACATGATGGA...GGGTCCTGGTGCAGGCAGTGAACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGCAAGGAGACCAAAGCTCTaGAATGTACAAAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: HTPNRRVFTSSEPGHLQARRPKL*NVQRQC
Trigger: ACACTGTCTTTGTACATTTCAGAGCTTTGGTCTCCT...TGCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp TGTAGCTTTCCTTCTCACCACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCGGACCCCCACCTTTGTaGTTGCAACAAGTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: CSFPSHHRNQKSTRDSSSGPPPL*LQQVGQ
Trigger: CTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCC...GGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTGGTGAGAAGGAAAGCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GCTTCAACAAGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATGACCTAGCGCAATACTaGAAGTTTCCCCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: ASTSNPLGSVAASPEAFYDLAQY*KFPPLA
Trigger: AGCAAGTGGGGGAAACTTTCAGTATTGCGCTAGGTC...ATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACTTGTTGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGTGTTAAGAGCCTGCTTAATTaGTGCAACCAAACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PLTQPTPQSSKTHAGISVKSLLN*CNQTCF
Trigger: GAAGCAAGTTTGGTTGCATCAATTAAGCAGGCTCTT...AACACTGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCGGTTTTCACCAGCTCTaGGCCTGGACACTTACAGGC +
Preference number: 4 (lower is better)
Translates to: DESSIPCSSFSLGTLFSFGFHQL*AWTLTG
Trigger: GCCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACC...GAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp GTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTGGGTCGATAGCTTCCGGATTCCCTTCGAAGGGCTaGGGAATGACTGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VLVIRPLSGHVVGSIASGFPSKG*GMTERR
Trigger: TCTCCTTTCAGTCATTCCTCAGCCCTTCGAAGGGAA...TCCGGAAGCTATCGACCCAACAACATGTCCAGAAAGAGGCCTTATGACCAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp GTGGTCTCGGTCACTGCTGTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTTTGCACCGTGAGGACTaGTGCAACTTTCAGACACAC +
Preference number: 4 (lower is better)
Translates to: VVSVTAVLVIRPLSGHVVLHRED*CNFQTH
Trigger: GTGTGTCTGAAAGTTGCATCAGTCCTCACGGTGCAA...AACAACATGTCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACCGAGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACGGGGGAATCTGTGTTTaGTTTGAAGTCCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHGGICV*FEVLCP
Trigger: TGGGCACAGGACTTCAAAGCAAACACAGATTCCCCC...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTCACTTTCCGACTGACTaGCTGAGTCTGAACCCGAAG +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLHFPTD*LSLNPK
Trigger: CTTCGGGTTCAGACTCAGGCAGTCAGTCGGAAAGTG...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CAAGGCAATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTGCTCTTCGACGAGTCTaGCTTTTGGGAGCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: QGNHGLESVLSARSSICGALRRV*LLGASS
Trigger: TGACGAAGCTCCCAAAAGGCAGACTCGTCGAAGAGC...ACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp TCAACAAGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTGCTTCAGGGCCTTaGATTCTCTTGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: STSNPLGSVAASPEAFYLSASGP*ILLLGW
Trigger: CCATCCCAACAAGAGAATGCAAGGCCCTGAAGCAGA...CAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACTTGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp CATGTGTGCTACAAGTCCAGGCTGGACAACCCCAAGAACTGTGAGGGTTCAGCACCCGTATCGTATTTCTaGTCATCAGGTCACCTATGT +
Preference number: 4 (lower is better)
Translates to: HVCYKSRLDNPKNCEGSAPVSYF*SSGHLC
Trigger: ACATAGGTGACCTGATGAGCAGAAATACGATACGGG...TGCTGAACCCTCACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGCACACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCACCCGTATCGTATTTCTaGTCATCAGGTCACCTATGT +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPPVSYF*SSGHLC
Trigger: ACATAGGTGACCTGATGAGCAGAAATACGATACGGG...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CACAGGTACTTATTTCCATCTGCCCACCACATGATGTGTGATTCTGTCTACTCTATGCGCTCGGGCTTGTaGCTGCAAGTCATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: HRYLFPSAHHMMCDSVYSMRSGL*LQVILG
Trigger: CCCCAGAATGACTTGCAGGCACAAGCCCGAGCGCAT...AGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTGGCCAGTGGTGTCCATaGGCTGAATCACCAGATGAT +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLGQWCP*AESPDD
Trigger: ATCATCTGGTGATTCAGCGCATGGACACCACTGGCC...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTACAGCATCACGTGCTATaGACTCCAGCCGTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLQHHVL*TPAVQE
Trigger: CTCTTGAACGGCTGGAGTGCATAGCACGTGATGCTG...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AGCATCACGTGCTATGCACTCCAGCTTTATCTCCCTCACGAAGGTGAAAGTCTTCAGGCGCTTCAGATCTaGCACCGACTTATCTACCAG +
Preference number: 4 (lower is better)
Translates to: SITCYALQLYLPHEGESLQALQI*HRLIYQ
Trigger: CTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCTG...AAGACTTTCACCTTCGTGAGGGAGATAAAGCTGGAGTGCATAGCACGTGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637789.1
CDS-3UTR GCA 90 bp CCGACTTATCTACCAGCTCAGCATCACGTGCTATGCACTCCAGCTTTATCTCCCTGCTCTTCGTATTCCTaGATTGCTGACACACAGCTG +
Preference number: 4 (lower is better)
Translates to: PTYLPAQHHVLCTPALSPCSSYS*IADTQL
Trigger: CAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCA...GGGAGATAAAGCTGGAGTGCATAGCACGTGATGCTGAGCTGGTAGATAAGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637789.1
CDS-3UTR GCA 90 bp CTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATCTGCCACCGACAGGGATAGATTTATaGAGCATCTCAAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: LTHSCCGSVHPGASDLPPTGIDL*SISNSS
Trigger: AGAGGAGTTTGAGATGCTGCATAAATCTATCCCTGT...CGGTGGCAGATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR GCA 90 bp GTTTATATTCCCCCAGTTTATCTGTGTGGAAAGAGCGGTAATGGTCTGAGGGTCTCTCTTGGGTGTCCATaGATCTGTGGGCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: VYIPPVYLCGKSGNGLRVSLGCP*ICGPWE
Trigger: CTCCCATGGCCCACAGATGCATGGACACCCAAGAGA...GACCCTCAGACCATTACCGCTCTTTCCACACAGATAAACTGGGGGAATATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR GCA 90 bp GTTTATATTCCCCCAGTTTATCTGTGTGGAAAGAGCGGTAATGGTCTGAGGGTCGGTGGTCTCGGTCACTaGTGTACTGGTCATAAGGCC +
Preference number: 4 (lower is better)
Translates to: VYIPPVYLCGKSGNGLRVGGLGH*CTGHKA
Trigger: GGCCTTATGACCAGTACAGCAGTGACCGAGACCACC...GACCCTCAGACCATTACCGCTCTTTCCACACAGATAAACTGGGGGAATATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR GCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCTTCCTGCCCCGACCATaGACTAAGGTCCTGGGAACA +
Preference number: 4 (lower is better)
Translates to: NHGLESVLSARSSICGFLFLPRP*TKVLGT
Trigger: TGTTCCCAGGACCTTAGTGCATGGTCGGGGCAGGAA...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CACAGGTACTTATTTCCATCTGCCCACCACATGATGTGTGATTCTGTCTACTCTAGCCTGTTCACTGCCTaGACCAGGACCCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: HRYLFPSAHHMMCDSVYSSLFTA*TRTPTF
Trigger: AAAGGTGGGGGTCCTGGTGCAGGCAGTGAACAGGCT...AGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CCTCACAAGTTACTTCAGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTCACCACAGCCACATCTaGTTCATTCGGGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: PHKLLQEFNPAHAQQKGFHHSHI*FIRGIQ
Trigger: TTGGATCCCCCGAATGAAGCAGATGTGGCTGTGGTG...AAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCTGAAGTAACTTGTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp TCTGAATGCCTAGGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCCAGTCACCGGAGCTTTaGTTCAGGACATGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: SECLGDESSIPCSSFSLGQSPEL*FRTCVL
Trigger: TAGCACACATGTCCTGAAGCAAAGCTCCGGTGACTG...GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCCTAGGCATTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp CCCTGGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGTATACAAGGGCCAGATaGAGTTCAACAACCACAACT +
Preference number: 4 (lower is better)
Translates to: PWAPSCLYSQQHQSIIQGYTRAR*SSTTTT
Trigger: AGTTGTGGTTGTTGAACTGCATCTGGCCCTTGTATA...CCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp GGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACCGGCAGAATTTCAGCTCAGCATCACGTaGTATGCACTCCAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: GSVAASPEAFYLSPPAEFQLSIT*YALQLY
Trigger: ATAAAGCTGGAGTGCATAGCACGTGATGCTGAGCTG...AAATTCTGCCGGTGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637789.1
CDS-3UTR CCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTGGACTGGCTGGGATTTaGAACCTGCTGATTCGCTCT +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLGLAGI*NLLIRS
Trigger: AGAGCGAATCAGCAGGTTCCAAATCCCAGCCAGTCC...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp GGGCCAGATGCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCCTGGCCTCTTCTTTTTaGGCTCCCACTCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: GPDAVQQPQLPLKTHSMTLASSF*APTLRP
Trigger: GGGTCTGAGAGTGGGAGCCCAAAAAGAAGAGGCCAG...GGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGCATCTGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp TGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCTGAGCCTTGTAATTCCTaGTCAGAATCCACTTGTAAT +
Preference number: 4 (lower is better)
Translates to: CTRTPTFVIATSWSAGLPEPCNS*SESTCN
Trigger: ATTACAAGTGGATTCTGACCAGGAATTACAAGGCTC...AGGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp CCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATTGCCTCTTGTTCCTTTaGCAAGAGCCTTGTAATTCC +
Preference number: 4 (lower is better)
Translates to: PALLTHSCCGSVHPGASDCLLFL*QEPCNS
Trigger: GGAATTACAAGGCTCTTGCCAAAGGAACAAGAGGCA...ATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCGACACACAGCTGTTGTaGATCAGTTCACCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: NHGLESVLSARSSICGFLDTQLL*ISSPRR
Trigger: GCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTC...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp TCTGGACATGTTGTTGGGTCGATAGCTTCCGGAACGGTGGGCATCCATATGTCGCATAAGGCCTCTTTCTaGACATGTTGTTGGGTCGAT +
Preference number: 4 (lower is better)
Translates to: SGHVVGSIASGTVGIHMSHKASF*TCCWVD
Trigger: ATCGACCCAACAACATGTCCAGAAAGAGGCCTTATG...CGACATATGGATGCCCACCGTTCCGGAAGCTATCGACCCAACAACATGTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp CACAGGTACTTATTTCCATCTGCCCACCACATGATGTGTGATTCTGTCTACTCTCCTTCCCTGGCACAGTaGGAAAAGGAGGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: HRYLFPSAHHMMCDSVYSPSLAQ*EKEAHS
Trigger: TGAGTGGGCCTCCTTTTCCCACTGTGCCAGGGAAGG...AGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CCCATAATGGTGGTCCTTGTACCAGTGCTGCTCATACTGATGGTGCCTGTCGCTAAGAAGCTCCATCTGTaGTTTCCTCATCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: PIMVVLVPVLLILMVPVAKKLHL*FPHHCV
Trigger: CACACAGTGATGAGGAAACCACAGATGGAGCTTCTT...AGCGACAGGCACCATCAGTATGAGCAGCACTGGTACAAGGACCACCATTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp GGGCCAGATGCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCGAAAGTTGCGTAAAGTaGGGCAAAGGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GPDAVQQPQLPLKTHSMTESCVK*GKGREQ
Trigger: CTGCTCCCTGCCTTTGCCTCACTTTACGCAACTTTC...GGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGCATCTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACCTCTCAGATTCCGACTaGCTCTCAGAAGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHLSDSD*LSEDSE
Trigger: CTCTGAATCTTCTGAGAGTCAGTCGGAATCTGAGAG...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CCCTGGGCCCCCTCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGGCTCCTGTTGGCAATTaGAATATTCTACATCTTCAG +
Preference number: 4 (lower is better)
Translates to: PWAPSCLYSQQHQSIIQGAPVGN*NILHLQ
Trigger: CTGAAGATGTAGAATATTTCAATTGCCAACAGGAGC...CCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGAGGGGGCCCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp ATCTGGCCGATACTGCCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTCTCTCTGCCATGAGGTaGGGGTGGATAAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: IWPILPFATSYGTESPKCLSAMR*GWIKGR
Trigger: TCGTCCCTTTATCCACCCTCACCTCATGGCAGAGAG...ACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGGCAGTATCGGCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTCCCCTTCCAGTTCTTTaGAGAGATCCTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLPLPVL*RDPLLQ
Trigger: TTGGAGCAGAGGATCTCTTCAAAGAACTGGAAGGGG...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCATCACTGTCATTTGTCTaGGCCTTTTTAGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPSLSFV*AFLVEL
Trigger: GAGTTCCACTAAAAAGGCTCAGACAAATGACAGTGA...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCAGAACTCCGGATATCTTaGTTGTTGGACCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SNPLGSVAASPEAFYLSPELRIS*LLDLSF
Trigger: AAAGGAGAGGTCCAACAATCAAGATATCCGGAGTTC...TGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR TCA 90 bp CCCTACCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCAGATTTCACATTAACCTaGACTCCGGATATCTTGATT +
Preference number: 4 (lower is better)
Translates to: PYPSLSLLPSQVRPMLASDFTLT*TPDILI
Trigger: AATCAAGATATCCGGAGTTCAGGTTAATGTGAAATC...TGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGGTAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp GGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACCGGCAGAATTTCAAAATGTGCAGCTTTaGCACGACAGGTTAAGCAGT +
Preference number: 4 (lower is better)
Translates to: GSVAASPEAFYLSPPAEFQNVQL*HDRLSS
Trigger: ACTGCTTAACCTGTCGTGTCAAAGCTGCACATTTTG...AAATTCTGCCGGTGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR TCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTAGATGTGCTCCTGATCTaGGTAGGCTTTAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLDVLLI*VGFKAL
Trigger: GAGTGCCTTAAAGCCTACTCAGATCAGGAGCACATC...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CCTCACAAGTTACTTCAGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTTCCTCCTCCAGAGTTTaGTGTGCTCCTGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: PHKLLQEFNPAHAQQKGFSSSRV*CAPDLS
Trigger: ACTCAGATCAGGAGCACATCAAACTCTGGAGGAGGA...AAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCTGAAGTAACTTGTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp ACTGAAAGTTTCCCCCACTTGCTGGCACTACTGAACCCCACATTAGAAGCCTGTAGGGTGAAGGTTGTGTaGGGTATGGGACTGAGATAT +
Preference number: 4 (lower is better)
Translates to: TESFPHLLALLNPTLEACRVKVV*GMGLRY
Trigger: ATATCTCAGTCCCATACCTCACACAACCTTCACCCT...ACAGGCTTCTAATGTGGGGTTCAGTAGTGCCAGCAAGTGGGGGAAACTTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CTGAGCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCCTATGATCCAGGGGTaGCTTGGAATCGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLDTYRHTVCSSQLFCLPMIQG*LGIVRR
Trigger: TCTCCTCACGATTCCAAGTCACCCCTGGATCATAGG...GAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp TCTGAATGCCTAGGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCTGCAGCAGGAAGTGTTaGCCTAGCGCAATACTGAAA +
Preference number: 4 (lower is better)
Translates to: SECLGDESSIPCSSFSLGCSRKC*PSAILK
Trigger: TTTCAGTATTGCGCTAGGTCAACACTTCCTGCTGCA...GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCCTAGGCATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CTGCTGGTGGTAATTTTGAGGCCTAAATTCATCGGATCTCCTCCGCTTGGAGTCCATCTGCCCACCACATaGTGTGTGATTCTGTCTACT +
Preference number: 4 (lower is better)
Translates to: LLVVILRPKFIGSPPLGVHLPTT*CVILST
Trigger: AGTAGACAGAATCACACATCATGTGGTGGGCAGATG...GACTCCAAGCGGAGGAGATCCGATGAATTTAGGCCTCAAAATTACCACCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CAAGGCAATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTGCACCGTGAGGACTaGTGCAACTTTCAGACACAC +
Preference number: 4 (lower is better)
Translates to: QGNHGLESVLSARSSICGLHRED*CNFQTH
Trigger: GTGTGTCTGAAAGTTGCATCAGTCCTCACGGTGCAA...ACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTCTTTTCCTGCACAGGTaGAATGTGCTCCCTATGACC +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLLFLHR*NVLPMT
Trigger: GGTCATAGGGAGCACATTTCACCTGTGCAGGAAAAG...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCACTTAACAGCAAGACCTaGAAAAGGAAACTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPLNSKT*KRKLLP
Trigger: TGGAAGCAGTTTCCTTTTTCAGGTCTTGCTGTTAAG...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp TCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGCCAGATGCAGTTGGTGGGTGGATCATTTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SCLYSQQHQSIIQGPDAVGGWII*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAATGATCCACCCACC...AACTGCATCTGGCCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTGCACAAAAATGGAGGTaGGCCATGGCTTCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLAQKWR*AMASKL
Trigger: CAGCTTAGAAGCCATGGCGCACCTCCATTTTTGTGC...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GCACCAATCCATTATACAAGGGCCAGATGCAGTTCAACAACCACAACTTCCTCTCACTTTCCGACTGACTaGCTGAGTCTGAACCCGAAG +
Preference number: 4 (lower is better)
Translates to: APIHYTRARCSSTTTTSSHFPTD*LSLNPK
Trigger: CTTCGGGTTCAGACTCAGGCAGTCAGTCGGAAAGTG...AGAGGAAGTTGTGGTTGTTGAACTGCATCTGGCCCTTGTATAATGGATTGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTATCTGCTTCAGGGCCTTaGATTCTCTTGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLSASGP*ILLLGW
Trigger: CCATCCCAACAAGAGAATGCAAGGCCCTGAAGCAGA...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACCGGCAGAATTTCCCGTATCGTATTTCTaGTCATCAGGTCACCTATGT +
Preference number: 4 (lower is better)
Translates to: GSVAASPEAFYLSPPAEFPVSYF*SSGHLC
Trigger: ACATAGGTGACCTGATGAGCAGAAATACGATACGGG...AAATTCTGCCGGTGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp GAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTCAGGCGCTTCAGATCTaGCACCGACTTATCTACCAG +
Preference number: 4 (lower is better)
Translates to: EMKAQFHAPLSAWALCFPQALQI*HRLIYQ
Trigger: CTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCTG...AGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp CTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATCTGTCTCCACCGGCAGAAGCATTTTCTTTCAGCTaGTCTTCGTATTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: LGSVAASPEAFYLSPPAEAFSFS*SSYSCI
Trigger: AATGCAGGAATACGAAGAGCAGCTGAAAGAAAATGC...TTCTGCCGGTGGAGACAGATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR GCA 90 bp GGCGCTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGCACAGGGATAGATTTATaGAGCATCTCAAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: GASDLPPTYLPAQHHVLCTGIDL*SISNSS
Trigger: AGAGGAGTTTGAGATGCTGCATAAATCTATCCCTGT...GCATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR GCA 90 bp TCTGAATGCCTAGGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCGACAGGTTCACTTCCTaGTGTAATATGGACAGGACC +
Preference number: 4 (lower is better)
Translates to: SECLGDESSIPCSSFSLGDRFTS*CNMDRT
Trigger: GGTCCTGTCCATATTACAGCAGGAAGTGAACCTGTC...GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCCTAGGCATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp ACCGGCTACTGTAGGATCAGACCAAAAATATCCACGTGTTTGGTGACTCTTACTTGGAATGGGATGGGGTaGCAAAGTGCAGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TGYCRIRPKISTCLVTLTWNGMG*QSAGVV
Trigger: CACCACTCCTGCACTTTGGCACCCCATCCCATTCCA...AGTAAGAGTCACCAAACACGTGGATATTTTTGGTCTGATCCTACAGTAGCCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp AAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTAAGCCTGTTCACTGCCTaGACCAGGACCCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: KAQFHAPLSAWALCFPSLSLFTA*TRTPTF
Trigger: AAAGGTGGGGGTCCTGGTGCAGGCAGTGAACAGGCT...TAAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CCTCTTAAAACCCATTCAATGACCACTGGAGCTCAGAGACTTCTACATTGGTGCGCCATGTCCACTTCCTaGATCACTTCCCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: PLKTHSMTTGAQRLLHWCAMSTS*ITSLLT
Trigger: AGTGAGCAGGGAAGTGATCCAGGAAGTGGACATGGC...GCACCAATGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp ATCTGGCCGATACTGCCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTCTGGCCTCTTCTTTTTaGGCTCCCACTCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: IWPILPFATSYGTESPKCLASSF*APTLRP
Trigger: GGGTCTGAGAGTGGGAGCCCAAAAAGAAGAGGCCAG...ACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGGCAGTATCGGCCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp AGTCAAGTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCGACGAGTCTGCCTTTTaGGAGCTTCGTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: SQVRPMLASVLPHSQYSVDESAF*ELRHHH
Trigger: ATGATGATGACGAAGCTCCCAAAAGGCAGACTCGTC...GACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTACTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCAGAGTTGTTCCTACTGTaGAAGCTGTCAATGCAATTC +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPELFLL*KLSMQF
Trigger: GAATTGCATTGACAGCTTCCACAGTAGGAACAACTC...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp AGGCGCTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGAGGAGAGGAATGATATaGTCTGGATGGTCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: RRFRSATDLSTSSASRAMRRGMI*SGWSFL
Trigger: TAGGAAAGACCATCCAGACCATATCATTCCTCTCCT...CATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCACACTACGTTAATCTCTaGTGCCCAGATTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPHYVNL*CPDFKL
Trigger: GAGTTTGAAATCTGGGCACCAGAGATTAACGTAGTG...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp TGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGGTAATCAGGAGCCTATaGTTGGACTTGAAATCAATC +
Preference number: 4 (lower is better)
Translates to: CTRPTEGFSPALSLDTYRVIRSL*LDLKSI
Trigger: GATTGATTTCAAGTCCAACCATAGGCTCCTGATTAC...CCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp ATTCATCGGATCTCCTCCGCTTGGAGTCATGATGGTGCCTGTCATAATAATCTCCCTCATCCTCTCCAATaGGGACAGGTTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: IHRISSAWSHDGACHNNLPHPLQ*GQVHFL
Trigger: CAGGAAGTGAACCTGTCCCCATTGGAGAGGATGAGG...GAGATTATTATGACAGGCACCATCATGACTCCAAGCGGAGGAGATCCGATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CTACTCTATTTCTTCAAGCTGTGCAAAGGGAAGGAAATGCAGCAGGAAGTGTTGGTCGCTTCCCCATGGTaGATTGTTGTTGCCACCACC +
Preference number: 4 (lower is better)
Translates to: LLYFFKLCKGKEMQQEVLVASPW*IVVATT
Trigger: GGTGGTGGCAACAACAATCCACCATGGGGAAGCGAC...CAACACTTCCTGCTGCATTTCCTTCCCTTTGCACAGCTTGAAGAAATAGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTGCTACAAGTCCAGGCTaGACAACCCCAAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: EMKAQFHAPLSAWALCFPATSPG*TTPRTV
Trigger: CACAGTTCTTGGGGTTGTCCAGCCTGGACTTGTAGC...AGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CCTCACAAGTTACTTCAGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTGCTTGGGGTTTCACCTaGCCCTTTTCTAAGGCCATA +
Preference number: 4 (lower is better)
Translates to: PHKLLQEFNPAHAQQKGFAWGFT*PFSKAI
Trigger: TATGGCCTTAGAAAAGGGCCAGGTGAAACCCCAAGC...AAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCTGAAGTAACTTGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCTCTGGCCTAAAGCAGCCTaGACCCTTGGCATGGCTCCC +
Preference number: 4 (lower is better)
Translates to: ISTNNEIFQSQTPGNTILWPKAA*TLGMAP
Trigger: GGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCA...GAGGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CCTCTTAAAACCCATTCAATGACCACTGGAGCTCAGAGACTTCTACATTGGTGCAGCTTCTTCAGAGGCTaGGTGACTCGATGCATTGCT +
Preference number: 4 (lower is better)
Translates to: PLKTHSMTTGAQRLLHWCSFFRG*VTRCIA
Trigger: AGCAATGCATCGAGTCACTCAGCCTCTGAAGAAGCT...GCACCAATGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp CCTCACCCCTGGGGTCTAGTAGTTCTCCTATTGAACTATAAGAATCTTTCTCTTTGCTCACTTTCCGACTaGCTGCCTGAGTCTGAACCC +
Preference number: 4 (lower is better)
Translates to: PHPWGLVVLLLNYKNLSLCSLSD*LPESEP
Trigger: GGGTTCAGACTCAGGCAGTCAGTCGGAAAGTGAGCA...AAGAGAAAGATTCTTATAGTTCAATAGGAGAACTACTAGACCCCAGGGGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp CTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCTGTTGGGATGGTTTTTaGGTTGTTCCTACTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LRIPALLTHSCCGSVHPGCWDGF*VVPTVE
Trigger: TTCCACAGTAGGAACAACTCAAAAACCATCCCAACA...GCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp TTTTCTTTCAGCTGCTCTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGCCCCTTCCAGTTCTTTaGAGAGATCCTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FSFSCSSYSCIADTQLLWPLPVL*RDPLLQ
Trigger: TTGGAGCAGAGGATCTCTTCAAAGAACTGGAAGGGG...CCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTGAAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp AGTTTCCATAGCCATGTTCATAAATCCCCAGCAACAGGCGAGAATCATCTTCCATCATCCCAGTCCTTGTaGGGACGCTCTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: SFHSHVHKSPATGENHLPSSQSL*GRSSSS
Trigger: AGAGCTAGAAGAGCGTCCTCACAAGGACTGGGATGA...TGGAAGATGATTCTCGCCTGTTGCTGGGGATTTATGAACATGGCTATGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACTTTGTTCCTCTGGAATaGTCTCATCCCAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHFVPLE*SHPSPC
Trigger: ACAAGGACTGGGATGAGATCATTCCAGAGGAACAAA...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGCACTCTCACTGTCATTTGTCTaGGCCTTTTTAGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: LQICHRLIYQLSITCYALSLSFV*AFLVEL
Trigger: GAGTTCCACTAAAAAGGCTCAGACAAATGACAGTGA...GAGTGCATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR TCA 90 bp ATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCATCACTGTCATTTGTCTaGGCCTTTTTAGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: IPALLTHSCCGSVHPGASSLSFV*AFLVEL
Trigger: GAGTTCCACTAAAAAGGCTCAGACAAATGACAGTGA...TGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR TCA 90 bp TATCTACCAGCTCAGCATCACGTGCTATGCACTCCAGCTTTATCTCCCTCACGAGAACTCCGGATATCTTaGTTGTTGGACCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: YLPAQHHVLCTPALSPSRELRIS*LLDLSF
Trigger: AAAGGAGAGGTCCAACAATCAAGATATCCGGAGTTC...TCGTGAGGGAGATAAAGCTGGAGTGCATAGCACGTGATGCTGAGCTGGTAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637789.1
CDS-3UTR TCA 90 bp GTGGTCTCGGTCACTGCTGTACTGGTCATAAGGCCTCTTTCTGGACATGTTGTTCAAAATGTGCAGCTTTaGCACGACAGGTTAAGCAGT +
Preference number: 4 (lower is better)
Translates to: VVSVTAVLVIRPLSGHVVQNVQL*HDRLSS
Trigger: ACTGCTTAACCTGTCGTGTCAAAGCTGCACATTTTG...AACAACATGTCCAGAAAGAGGCCTTATGACCAGTACAGCAGTGACCGAGACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACCAAAATGTGCAGCTTTaGCACGACAGGTTAAGCAGT +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHQNVQL*HDRLSS
Trigger: ACTGCTTAACCTGTCGTGTCAAAGCTGCACATTTTG...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACTCTCCAGACCCTTTCTaGGCAGCTTCAACAAGTAAT +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHSPDPF*AASTSN
Trigger: ATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGA...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GCTTCAACAAGTAATCCGCTCGGGTCTGTAGCTGCTTCCCCTGAGGCTTTTTATTCTCCAGACCCTTTCTaGGCAGCTTCAACAAGTAAT +
Preference number: 4 (lower is better)
Translates to: ASTSNPLGSVAASPEAFYSPDPF*AASTSN
Trigger: ATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGA...ATAAAAAGCCTCAGGGGAAGCAGCTACAGACCCGAGCGGATTACTTGTTGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
ENST00000637789.1
CDS-3UTR TCA 90 bp ATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCTCCCCATAGCGGGGCGGTaGTCAGACATTCGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: ISTNNEIFQSQTPGNTILPIAGR*SDIRRK
Trigger: TTTCCGACGAATGTCTGATCACCGCCCCGCTATGGG...GAGGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CCTCACAAGTTACTTCAGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTACTGTGTTTGCACCGTaGGGACTGATGCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: PHKLLQEFNPAHAQQKGFTVFAP*GLMQLS
Trigger: TGAAAGTTGCATCAGTCCTCACGGTGCAAACACAGT...AAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCTGAAGTAACTTGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCAGAAATGTGCTCCCTATaGCCCACAAAACAAAACATA +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPEMCSL*PTKQNI
Trigger: TATGTTTTGTTTTGTGGGTCATAGGGAGCACATTTC...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CCTCTTAAAACCCATTCAATGACCACTGGAGCTCAGAGACTTCTACATTGGTGCGGGGGAATCTGTGTTTaGTTTGAAGTCCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PLKTHSMTTGAQRLLHWCGGICV*FEVLCP
Trigger: TGGGCACAGGACTTCAAAGCAAACACAGATTCCCCC...GCACCAATGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp GCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCACTGGAGCTGCTCTTCGACGAGTCTaGCTTTTGGGAGCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: AVQQPQLPLKTHSMTTGAALRRV*LLGASS
Trigger: TGACGAAGCTCCCAAAAGGCAGACTCGTCGAAGAGC...AGCTCCAGTGGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTCTTCACTCTCCCATGTaGTGTGGATGTAAGACCAAC +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLLHSPM*CGCKTN
Trigger: GTTGGTCTTACATCCACAGCACATGGGAGAGTGAAG...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACATTGAAGTGGTCCAGTaGCTGTTTTCGGATTTCTCC +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHIEVVQ*LFSDFS
Trigger: GGAGAAATCCGAAAACAGGCACTGGACCACTTCAAT...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp ACCGGCTACTGTAGGATCAGACCAAAAATATCCACGTGTTTGGTGACTCTTACTGTCCTCAGACCCATCTaGATTGAAGTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TGYCRIRPKISTCLVTLTVLRPI*IEVVQC
Trigger: GCACTGGACCACTTCAATGCAGATGGGTCTGAGGAC...AGTAAGAGTCACCAAACACGTGGATATTTTTGGTCTGATCCTACAGTAGCCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp AGTTTCCATAGCCATGTTCATAAATCCCCAGCAACAGGCGAGAATCATCTTCCAGGCCAGTGGTGTCCATaGGCTGAATCACCAGATGAT +
Preference number: 4 (lower is better)
Translates to: SFHSHVHKSPATGENHLPGQWCP*AESPDD
Trigger: ATCATCTGGTGATTCAGCGCATGGACACCACTGGCC...TGGAAGATGATTCTCGCCTGTTGCTGGGGATTTATGAACATGGCTATGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCAGCATTTTCTTTCAGCTaGTCTTCGTATTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPAFSFS*SSYSCI
Trigger: AATGCAGGAATACGAAGAGCAGCTGAAAGAAAATGC...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CCCCTTCTTCTCCAGACCCTTTCTGAGCAGCTTCAACAAGTAATCCGCTCGGGTGCATTTTCTTTCAGCTaGTCTTCGTATTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: PLLLQTLSEQLQQVIRSGAFSFS*SSYSCI
Trigger: AATGCAGGAATACGAAGAGCAGCTGAAAGAAAATGC...ACCCGAGCGGATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGAAGAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR GCA 90 bp CTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGCACTCCAGCTTTACTCTACATCAAAATGTaGAGCTTTGACACGACAGGT +
Preference number: 4 (lower is better)
Translates to: LPPTYLPAQHHVLCTPALLYIKM*SFDTTG
Trigger: ACCTGTCGTGTCAAAGCTGCACATTTTGATGTAGAG...TAAAGCTGGAGTGCATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR GCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCGTCGAGCTGTTTCAGTaGCTTTTTCACGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: NHGLESVLSARSSICGFLVELFQ*LFHGPH
Trigger: ATGAGGCCCGTGAAAAAGGCACTGAAACAGCTCGAC...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp GTCGCTTCCCCATGGTGGATTGTTGTTGCCACCACCATAGTTGAACTTTCTTTCAACTTTCTTTCCCTCTaGCAGTCTCCTCGATCTGCA +
Preference number: 4 (lower is better)
Translates to: VASPWWIVVATTIVELSFNFLSL*QSPRSA
Trigger: TGCAGATCGAGGAGACTGGCAGAGGGAAAGAAAGTT...GAAAGAAAGTTCAACTATGGTGGTGGCAACAACAATCCACCATGGGGAAGCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR GCA 90 bp TATCAGCAACTCAAGAGAGAAGCCCTGATGACTGTGGAAACCCTGATGGAAATGTGCTGGCATCAGTGTTaGCTCACTCACAGTACTCAG +
Preference number: 4 (lower is better)
Translates to: YQQLKREALMTVETLMEMCWHQC*LTHSTQ
Trigger: CTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCA...CATTTCCATCAGGGTTTCCACAGTCATCAGGGCTTCTCTCTTGAGTTGCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp CCCTACCCCTCACTCAGCCTACTCCCCAGTCAAGTAAGACCCATGCTGGCATCACAATTGAAAAGAGCCTaGTTAATTGATGCAACCAAA +
Preference number: 4 (lower is better)
Translates to: PYPSLSLLPSQVRPMLASQLKRA*LIDATK
Trigger: TTTGGTTGCATCAATTAAGCAGGCTCTTTTCAATTG...TGATGCCAGCATGGGTCTTACTTGACTGGGGAGTAGGCTGAGTGAGGGGTAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CCTCACCCCTGGGGTCTAGTAGTTCTCCTATTGAACTATAAGAATCTTTCTCTTAGGCTGGCTTCTCTTTaGCTTCTGGGAGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: PHPWGLVVLLLNYKNLSLRLASL*LLGGLA
Trigger: AGCCAGTCCTCCCAGAAGCCAAAGAGAAGCCAGCCT...AAGAGAAAGATTCTTATAGTTCAATAGGAGAACTACTAGACCCCAGGGGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp CCTCACAAGTTACTTCAGGAGTTTAACCCTGCACACGCCCAACAGAAGGGTTTTTTCCTTCTTAGAGGCTaGCTTCTCTTTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PHKLLQEFNPAHAQQKGFFLLRG*LLFGFW
Trigger: CCAGAAGCCAAAGAGAAGCCAGCCTCTAAGAAGGAA...AAAACCCTTCTGTTGGGCGTGTGCAGGGTTAAACTCCTGAAGTAACTTGTGAGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp TGCACACGCCCAACAGAAGGGTTTTCACCAGCTCTGAGCCTGGACACTTACAGGAATATTAAATCGCGATaGTTCTTGTCTGCTTCGGTT +
Preference number: 4 (lower is better)
Translates to: CTRPTEGFSPALSLDTYRNIKSR*FLSASV
Trigger: AACCGAAGCAGACAAGAACCATCGCGATTTAATATT...CCTGTAAGTGTCCAGGCTCAGAGCTGGTGAAAACCCTTCTGTTGGGCGTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp AGCTGCTCTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCAGACGAGTCTGCCTTTTaGGAGCTTCGTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: SCSSYSCIADTQLLWISSDESAF*ELRHHH
Trigger: ATGATGATGACGAAGCTCCCAAAAGGCAGACTCGTC...TGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp CTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCCACTACGTTAATCTCTaGTGCCCAGATTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: LRIPALLTHSCCGSVHPGHYVNL*CPDFKL
Trigger: GAGTTTGAAATCTGGGCACCAGAGATTAACGTAGTG...GCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp GCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATCTGGTAATCAGGAGCCTATaGTTGGACTTGAAATCAATC +
Preference number: 4 (lower is better)
Translates to: ALLTHSCCGSVHPGASDLVIRSL*LDLKSI
Trigger: GATTGATTTCAAGTCCAACCATAGGCTCCTGATTAC...CAGATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp CAGGCGCTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGAGCCTTGTAATTCCTaGTCAGAATCCACTTGTAAT +
Preference number: 4 (lower is better)
Translates to: QALQICHRLIYQLSITCYEPCNS*SESTCN
Trigger: ATTACAAGTGGATTCTGACCAGGAATTACAAGGCTC...ATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTATCCGCTTCTTTAATTTaGCCTCTTCCCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLSASLI*PLPHLS
Trigger: TGACAGGTGGGGAAGAGGCCAAATTAAAGAAGCGGA...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp TTCAGCTGCTCTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCCGCTTCTTTAATTTaGCCTCTTCCCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: FSCSSYSCIADTQLLWISSASLI*PLPHLS
Trigger: TGACAGGTGGGGAAGAGGCCAAATTAAAGAAGCGGA...ACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR CCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACATGCTGAATGTCTCCTaGTCCAGATCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHMLNVS*SRSSSS
Trigger: TGAGGATGATGATCTGGACCAGGAGACATTCAGCAT...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp ATGTACAAAGACAGTGTGGGAAAAATTAGTGTTGGCAGAGATGAAGCAGTTGTGGGGATTCCAGTTCCCTaGCCACACTACTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: MYKDSVGKISVGRDEAVVGIPVP*PHYSPP
Trigger: AGGTGGGGAGTAGTGTGGCCAGGGAACTGGAATCCC...CACAACTGCTTCATCTCTGCCAACACTAATTTTTCCCACACTGTCTTTGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTGTGATTGCAACAAGTTaGTCAGCAGGCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ESSIPCSSFSLGTLFSFFVIATS*SAGLPL
Trigger: CAGAGGCAGGCCTGCTGACCAACTTGTTGCAATCAC...AAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTACCTATAACCAAGACATaGGATTCGCTGTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLPITKT*DSLWLT
Trigger: TGTCAGCCACAGCGAATCCCATGTCTTGGTTATAGG...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACCTCTTTAGCTCTCCCTaGACTTGCTACTCTCACAAT +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHLFSSP*TCYSHN
Trigger: ATTGTGAGAGTAGCAAGTCCAGGGAGAGCTAAAGAG...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp ACCGGCTACTGTAGGATCAGACCAAAAATATCCACGTGTTTGGTGACTCTTACTTCTTCAGAGGCTGAGTaGCTCGATGCATTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TGYCRIRPKISTCLVTLTSSEAE*LDALLC
Trigger: ACACAGCAATGCATCGAGTCACTCAGCCTCTGAAGA...AGTAAGAGTCACCAAACACGTGGATATTTTTGGTCTGATCCTACAGTAGCCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCCTCTCAGATTCCGACTaGCTCTCAGAAGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: NHGLESVLSARSSICGFLLSDSD*LSEDSE
Trigger: CTCTGAATCTTCTGAGAGTCAGTCGGAATCTGAGAG...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp ATCTGGCCGATACTGCCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTTTCGGTTTGACCGCCTaGCCCCATAAACATCAGGAT +
Preference number: 4 (lower is better)
Translates to: IWPILPFATSYGTESPKCFGLTA*PHKHQD
Trigger: ATCCTGATGTTTATGGGGTCAGGCGGTCAAACCGAA...ACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGGCAGTATCGGCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTCCTGTTGGCAATTaGAATATTCTACATCTTCAG +
Preference number: 4 (lower is better)
Translates to: LRIPALLTHSCCGSVHPGAPVGN*NILHLQ
Trigger: CTGAAGATGTAGAATATTTCAATTGCCAACAGGAGC...GCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp TTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCTTCTTTCACTTCAAAATATTCGGGCTCATTTaGGGGTGCCGGCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: FFKATNRGLCFRAFFHFKIFGLI*GCRLPT
Trigger: AGTCGGAAGCCGGCACCCTCAAATGAGCCCGAATAT...TTTGAAGTGAAAGAAGGCCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630016.1
ENST00000637613.1
CDS-3UTR TCA 90 bp CTGAGCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCAGGTAGGAGAGGAATaGTATGGTCTGGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: LSLDTYRHTVCSSQLFCLQVGEE*YGLDGL
Trigger: AAGACCATCCAGACCATATCATTCCTCTCCTACCTG...GAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGCTCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATGCCTATGGTTGGACTTaGAATCAATCAGAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: PALLTHSCCGSVHPGASDAYGWT*NQSEFY
Trigger: ATAAAACTCTGATTGATTTCAAGTCCAACCATAGGC...ATCTGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp AGTTTCCATAGCCATGTTCATAAATCCCCAGCAACAGGCGAGAATCATCTTCCACTGTTTCTGAAGGGCTaGCATCTCCACCCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SFHSHVHKSPATGENHLPLFLKG*HLHPEN
Trigger: ATTCTCAGGGTGGAGATGTCAGCCCTTCAGAAACAG...TGGAAGATGATTCTCGCCTGTTGCTGGGGATTTATGAACATGGCTATGGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTAGAACTCCGGATATCTTaGTTGTTGGACCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLELRIS*LLDLSF
Trigger: AAAGGAGAGGTCCAACAATCAAGATATCCGGAGTTC...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CCCCTTCTTCTCCAGACCCTTTCTGAGCAGCTTCAACAAGTAATCCGCTCGGGTGATTTCACATTAACCTaGACTCCGGATATCTTGATT +
Preference number: 4 (lower is better)
Translates to: PLLLQTLSEQLQQVIRSGDFTLT*TPDILI
Trigger: AATCAAGATATCCGGAGTTCAGGTTAATGTGAAATC...ACCCGAGCGGATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGAAGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR TCA 90 bp AATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTACCCGAGGTCTCCAGACCCTTTCTaGGCAGCTTCAACAAGTAAT +
Preference number: 4 (lower is better)
Translates to: NSMLLFQPGHFVFLLYPRSPDPF*AASTSN
Trigger: ATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGA...CCTCGGGTAAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
CDS-3UTR TCA 90 bp TTCAGCTGCTCTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCTCCAGACCCTTTCTaGGCAGCTTCAACAAGTAAT +
Preference number: 4 (lower is better)
Translates to: FSCSSYSCIADTQLLWISSPDPF*AASTSN
Trigger: ATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGA...ACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR TCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTAACCCTGAGATCGCTTTaGTTTACTCGAAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLTLRSL*FTRRFG
Trigger: GCCAAATCTTCGAGTAAATCAAAGCGATCTCAGGGT...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp TTATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCCAGTGCTGCTCATACTaGTGGTGCCTGTCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LFLPTMKSFKARLQGIPSQCCSY*WCLSLP
Trigger: GGGAAGCGACAGGCACCATCAGTATGAGCAGCACTG...GGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAACAGTGCTGCTCATACTaGTGGTGCCTGTCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEQCCSY*WCLSLP
Trigger: GGGAAGCGACAGGCACCATCAGTATGAGCAGCACTG...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTGGAAACACATCCCAGTaGAGCTGGTACACACACAGT +
Preference number: 4 (lower is better)
Translates to: ESSIPCSSFSLGTLFSFFGNTSQ*SWYTHS
Trigger: ACTGTGTGTGTACCAGCTTCACTGGGATGTGTTTCC...AAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp AGTCAAGTAAGACCCATGCTGGCATCAGTGTTGCCTCACTCACAGTACTCAGTCCCACCACATGATGTGTaGTTCTGTCTACTCTATTTC +
Preference number: 4 (lower is better)
Translates to: SQVRPMLASVLPHSQYSVPPHDV*FCLLYF
Trigger: GAAATAGAGTAGACAGAATCACACATCATGTGGTGG...GACTGAGTACTGTGAGTGAGGCAACACTGATGCCAGCATGGGTCTTACTTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CACAGGTACTTATTTCCATCTGCCCACCACATGATGTGTGATTCTGTCTACTCTTTCCCTTCGAAGGGCTaGGGAATGACTGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: HRYLFPSAHHMMCDSVYSFPSKG*GMTERR
Trigger: TCTCCTTTCAGTCATTCCTCAGCCCTTCGAAGGGAA...AGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ACCGGCTACTGTAGGATCAGACCAAAAATATCCACGTGTTTGGTGACTCTTACTCAGAAGATTCAGAGCTaGTGTTCGACTCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TGYCRIRPKISTCLVTLTQKIQS*CSTRCH
Trigger: ATGGCAGCGAGTCGAACAGCAGCTCTGAATCTTCTG...AGTAAGAGTCACCAAACACGTGGATATTTTTGGTCTGATCCTACAGTAGCCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp GCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCATCACAAATCGTGGTCTCTaGTTCAGGGCCTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: AWTLTGTLYVQVSYSVSITNRGL*FRALHS
Trigger: AGAATGCAAGGCCCTGAAGCAGAGACCACGATTTGT...GATGGAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp TCAGGGTCCACAGGGATAGATTTATGCAGCATCTCAAACTCCTCTTCATGTTGGACAAATCGTGGTCTCTaGTTCAGGGCCTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: SGSTGIDLCSISNSSSCWTNRGL*FRALHS
Trigger: AGAATGCAAGGCCCTGAAGCAGAGACCACGATTTGT...CCAACATGAAGAGGAGTTTGAGATGCTGCATAAATCTATCCCTGTGGACCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp CTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCTACGTTAATCTCTGGTaGCCAGATTTCAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: LRIPALLTHSCCGSVHPGYVNLW*PDFKLS
Trigger: AGAGAGTTTGAAATCTGGGCACCAGAGATTAACGTA...GCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp AAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTAGTCCTCAGACCCATCTaGATTGAAGTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: KAQFHAPLSAWALCFPSLVLRPI*IEVVQC
Trigger: GCACTGGACCACTTCAATGCAGATGGGTCTGAGGAC...TAAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp CTGAGCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCGAACCTTCGGATCTCTaGATCAGTAAATCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSLDTYRHTVCSSQLFCLEPSDL*ISKSLH
Trigger: GTGGAGGGATTTACTGATGCAGAGATCCGAAGGTTC...GAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp AGTCAGTTATTCTGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTAGCTCCTCCTCCAAGTaGCCGTCAAAGTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SQLFCLHLERPLDTLNNTSSSSK*PSKWEA
Trigger: GGCCTCCCACTTTGACGGGCACTTGGAGGAGGAGCT...AGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACAGAATAACTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ATCTGGCCGATACTGCCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTTTTGAGGGGTGTACCTaGTCCCCTTCAAGTCCTATG +
Preference number: 4 (lower is better)
Translates to: IWPILPFATSYGTESPKCFEGCT*SPSSPM
Trigger: CATAGGACTTGAAGGGGAGCAGGTACACCCCTCAAA...ACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGGCAGTATCGGCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp TGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTGGCAATCTATACTGGCCAGGTGGCTCATaGAGTCACCGGAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: CLHLERPLDTLNNTGNLYWPGGS*SHRSFA
Trigger: AGCAAAGCTCCGGTGACTGCATGAGCCACCTGGCCA...GTATAGATTGCCAGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ATGTACAAAGACAGTGTGGGAAAAATTAGTGTTGGCAGAGATGAAGCAGTTGTGCCAGGCCAGAATGTCTaGAGCACAGCGTGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: MYKDSVGKISVGRDEAVVPGQNV*STACKV
Trigger: CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGG...CACAACTGCTTCATCTCTGCCAACACTAATTTTTCCCACACTGTCTTTGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp AGCTGCTCTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACAGCATCACGTGCTATaGACTCCAGCTTTAGTTATG +
Preference number: 4 (lower is better)
Translates to: SCSSYSCIADTQLLWISSQHHVL*TPALVM
Trigger: CATAACTAAAGCTGGAGTGCATAGCACGTGATGCTG...TGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp TGGTGCAATGCAGCAATGGCTAAACCGACAAGGTCATTTTTCTGCAGTACAAAAGAGAGCGCACAAAAATaGAGGTGCGCCATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: WCNAAMAKPTRSFFCSTKESAQK*RCAMAS
Trigger: AGAAGCCATGGCGCACCTCCATTTTTGTGCGCTCTC...TTTTGTACTGCAGAAAAATGACCTTGTCGGTTTAGCCATTGCTGCATTGCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000627622.1
CDS-3UTR CCA 90 bp TCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGCCAGATGCAGTTTTCCTTCTTAGAGGCTaGCTTCTCTTTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SCLYSQQHQSIIQGPDAVFLLRG*LLFGFW
Trigger: CCAGAAGCCAAAGAGAAGCCAGCCTCTAAGAAGGAA...AACTGCATCTGGCCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp GCACCAATCCATTATACAAGGGCCAGATGCAGTTCAACAACCACAACTTCCTCTGACGAGTCTGCCTTTTaGGAGCTTCGTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: APIHYTRARCSSTTTTSSDESAF*ELRHHH
Trigger: ATGATGATGACGAAGCTCCCAAAAGGCAGACTCGTC...AGAGGAAGTTGTGGTTGTTGAACTGCATCTGGCCCTTGTATAATGGATTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp AAGCACCAGGGGAGCAAGACCCACAGTGAGGAGGTATCAACTGAAACTGACCCACTGTCAATGCAATTCTaGAATTTCTTTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: KHQGSKTHSEEVSTETDPLSMQF*NFFPMR
Trigger: CCTCATTGGAAAGAAATTCCAGAATTGCATTGACAG...TGGGTCAGTTTCAGTTGATACCTCCTCACTGTGGGTCTTGCTCCCCTGGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CCCCTTCTTCTCCAGACCCTTTCTGAGCAGCTTCAACAAGTAATCCGCTCGGGTCTGTCAATGCAATTCTaGAATTTCTTTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: PLLLQTLSEQLQQVIRSGLSMQF*NFFPMR
Trigger: CCTCATTGGAAAGAAATTCCAGAATTGCATTGACAG...ACCCGAGCGGATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGAAGAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACGGATCGTCCGGCCAGTaGTGTCCATGCGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHGSSGQ*CPCAES
Trigger: TGATTCAGCGCATGGACACCACTGGCCGGACGATCC...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTTCCATGGGAGGACTGTaGCCAGGTGGCTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: PFATSYGTESPKCEQKEVSMGGL*PGGSCS
Trigger: ACTGCATGAGCCACCTGGCCACAGTCCTCCCATGGA...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CTACTCTATTTCTTCAAGCTGTGCAAAGGGAAGGAAATGCAGCAGGAAGTGTTGTTCCTCATCACTGTGTaGCCTAAGTGGAGACACAGG +
Preference number: 4 (lower is better)
Translates to: LLYFFKLCKGKEMQQEVLFLITV*PKWRHR
Trigger: CCTGTGTCTCCACTTAGGCCACACAGTGATGAGGAA...CAACACTTCCTGCTGCATTTCCTTCCCTTTGCACAGCTTGAAGAAATAGAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp TCTGAATGCCTAGGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCGGAGCAGGGAATCCCTaGAGTTTGTCAGTTAATTTA +
Preference number: 4 (lower is better)
Translates to: SECLGDESSIPCSSFSLGGAGNP*SLSVNL
Trigger: TAAATTAACTGACAAACTCCAGGGATTCCCTGCTCC...GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCCTAGGCATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACGTAAGGACTGTGGGCTaGTACCCATCTCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHVRTVG*YPSRDP
Trigger: GGGATCCCGAGATGGGTACCAGCCCACAGTCCTTAC...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTAGGCTCATCGTACTACTaGTGGCATTGTACTGAAGTA +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLGSSYY*WHCTEV
Trigger: TACTTCAGTACAATGCCACCAGTAGTACGATGAGCC...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
3UTR CAA 72 bp ATCAGACATTCGTCGGAAATCCTGCTGGTGGTAATTTaGAGGCCTAAATTCATCGGATCTCCTCCGCTTGGA +
Preference number: 4 (lower is better)
Translates to: IRHSSEILLVVI*RPKFIGSPPLG
Trigger: TCCAAGCGGAGGAGATCCGATGAATTTAGGCCTCAAAATTACCACCAGCAGGATTTCCGACGAATGTCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR TCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAATGCTCACTTTCCGACTaGCTGCCTGAGTCTGAACCC +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKECSLSD*LPESEP
Trigger: GGGTTCAGACTCAGGCAGTCAGTCGGAAAGTGAGCA...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAATATTCGGGCTCATTTaGGGGTGCCGGCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEIFGLI*GCRLPT
Trigger: AGTCGGAAGCCGGCACCCTCAAATGAGCCCGAATAT...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CTCCTAAATATGCAGGTTGTTTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAATATTCGGGCTCATTTaGGGGTGCCGGCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: LLNMQVVSLKLQIVVSASIFGLI*GCRLPT
Trigger: AGTCGGAAGCCGGCACCCTCAAATGAGCCCGAATAT...TGAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACAACCTGCATATTTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630016.1
ENST00000637613.1
CDS-3UTR TCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACCTCTCTGCCATGAGGTaGGGGTGGATAAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHLSAMR*GWIKGR
Trigger: TCGTCCCTTTATCCACCCTCACCTCATGGCAGAGAG...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTAACATTCTCACCATCTaGGAGAAGATAAGCACTCGA +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLNILTI*EKISTR
Trigger: TCGAGTGCTTATCTTCTCTCAGATGGTGAGAATGTT...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp ATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCAGATTTCACATTAACCTaGACTCCGGATATCTTGATT +
Preference number: 4 (lower is better)
Translates to: IPALLTHSCCGSVHPGASDFTLT*TPDILI
Trigger: AATCAAGATATCCGGAGTTCAGGTTAATGTGAAATC...TGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR TCA 90 bp TTTTCTTTCAGCTGCTCTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGCAAAATGTGCAGCTTTaGCACGACAGGTTAAGCAGT +
Preference number: 4 (lower is better)
Translates to: FSFSCSSYSCIADTQLLWQNVQL*HDRLSS
Trigger: ACTGCTTAACCTGTCGTGTCAAAGCTGCACATTTTG...CCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTGAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR TCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCTCTCCAGACCCTTTCTaGGCAGCTTCAACAAGTAAT +
Preference number: 4 (lower is better)
Translates to: NHGLESVLSARSSICGFLSPDPF*AASTSN
Trigger: ATTACTTGTTGAAGCTGCTCAGAAAGGGTCTGGAGA...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp ATGTACAAAGACAGTGTGGGAAAAATTAGTGTTGGCAGAGATGAAGCAGTTGTGGCTGTTCTTGCACGTTaGGCCCCTTGTCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: MYKDSVGKISVGRDEAVVAVLAR*APCQVC
Trigger: ACAAACCTGACAAGGGGCTCAACGTGCAAGAACAGC...CACAACTGCTTCATCTCTGCCAACACTAATTTTTCCCACACTGTCTTTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp ATGTACAAAGACAGTGTGGGAAAAATTAGTGTTGGCAGAGATGAAGCAGTTGTGTGTGAGGTATGGGACTaGGATATCAGAGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: MYKDSVGKISVGRDEAVVCEVWD*DIRESR
Trigger: CCGGGACTCTCTGATATCTCAGTCCCATACCTCACA...CACAACTGCTTCATCTCTGCCAACACTAATTTTTCCCACACTGTCTTTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCAGGAGACCAAAGCTCTaGAATGTACAAAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: GDESSIPCSSFSLGTLFSRRPKL*NVQRQC
Trigger: ACACTGTCTTTGTACATTTCAGAGCTTTGGTCTCCT...GGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CTACTCTATTTCTTCAAGCTGTGCAAAGGGAAGGAAATGCAGCAGGAAGTGTTGTGCAGCAGGAAGTGTTaGCCTAGCGCAATACTGAAA +
Preference number: 4 (lower is better)
Translates to: LLYFFKLCKGKEMQQEVLCSRKC*PSAILK
Trigger: TTTCAGTATTGCGCTAGGTCAACACTTCCTGCTGCA...CAACACTTCCTGCTGCATTTCCTTCCCTTTGCACAGCTTGAAGAAATAGAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CTACTCTATTTCTTCAAGCTGTGCAAAGGGAAGGAAATGCAGCAGGAAGTGTTGGACACCAGCAAGCACTaGAGTCCTCACAAGTTACTT +
Preference number: 4 (lower is better)
Translates to: LLYFFKLCKGKEMQQEVLDTSKH*SPHKLL
Trigger: AAGTAACTTGTGAGGACTTCAGTGCTTGCTGGTGTC...CAACACTTCCTGCTGCATTTCCTTCCCTTTGCACAGCTTGAAGAAATAGAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp CTGCCAGTCTCCTCGATCTGCATTACTGAAGTGTCTCTTGTTGGGGTGATTGTATCTCCCATTCACAAGTaGGAGAATTTACCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LPVSSICITEVSLVGVIVSPIHK*ENLPVQ
Trigger: TTGCACAGGTAAATTCTCTCACTTGTGAATGGGAGA...TACAATCACCCCAACAAGAGACACTTCAGTAATGCAGATCGAGGAGACTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp ACCGGCTACTGTAGGATCAGACCAAAAATATCCACGTGTTTGGTGACTCTTACTACTGTGTTTGCACCGTaGGGACTGATGCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: TGYCRIRPKISTCLVTLTTVFAP*GLMQLS
Trigger: TGAAAGTTGCATCAGTCCTCACGGTGCAAACACAGT...AGTAAGAGTCACCAAACACGTGGATATTTTTGGTCTGATCCTACAGTAGCCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACCTCAGACCCGCTACTTaGCTCTTCCTTAATATTAAA +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHLRPAT*LFLNIK
Trigger: TTTAATATTAAGGAAGAGGCAAGTAGCGGGTCTGAG...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp TTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCTTCTTTCACTTCAAAGCTCTTCGACGAGTCTaGCTTTTGGGAGCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: FFKATNRGLCFRAFFHFKALRRV*LLGASS
Trigger: TGACGAAGCTCCCAAAAGGCAGACTCGTCGAAGAGC...TTTGAAGTGAAAGAAGGCCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637613.1
CDS-3UTR GCA 90 bp CAGGCGCTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGTTTCACTATTATCTTaGTGTTCATCAACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QALQICHRLIYQLSITCYVSLLS*CSSTPS
Trigger: AGAAGGAGTTGATGAACAGCAAGATAATAGTGAAAC...ATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAGCGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTACCCTTCACTTTCTGTTaGTGTAAGGATTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLPFTFC*CKDSSL
Trigger: GAGTGAAGAATCCTTACAGCAACAGAAAGTGAAGGG...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp ATTCCTGCATTGCTGACACACAGCTGTTGTGGATCAGTTCACCCAGGCGCTTCATTACACTATTATTTTTaGACCAGGAATGAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: IPALLTHSCCGSVHPGASLHYYF*TRNELA
Trigger: GGCTAGCTCATTCCTGGTGCAAAAATAATAGTGTAA...TGAAGCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGCAATGCAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp ATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCTCCAGCATCACGTGCTATaGACTCCAGCCGTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: ISTNNEIFQSQTPGNTILQHHVL*TPAVQE
Trigger: CTCTTGAACGGCTGGAGTGCATAGCACGTGATGCTG...GAGGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp AGTTTCCATAGCCATGTTCATAAATCCCCAGCAACAGGCGAGAATCATCTTCCATGCTCTTCGTATTCCTaGATTGCTGACACACAGCTG +
Preference number: 4 (lower is better)
Translates to: SFHSHVHKSPATGENHLPCSSYS*IADTQL
Trigger: CAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCA...TGGAAGATGATTCTCGCCTGTTGCTGGGGATTTATGAACATGGCTATGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR GCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTTCTGAGACTGCAGGGTaGAATGGGGGTAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PFATSYGTESPKCEQKEVSETAG*NGGRGC
Trigger: ACAGCCTCTACCCCCATTGCACCCTGCAGTCTCAGA...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp TTATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCCCAGGCCAGAATGTCTaGAGCACAGCGTGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LFLPTMKSFKARLQGIPSPGQNV*STACKV
Trigger: CACTTTGCACGCTGTGCTGCAGACATTCTGGCCTGG...GGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACCCTGAAAAAGGAAACTaGTTCCAAATAACCTGCAAC +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHPEKGN*FQITCN
Trigger: GTTGCAGGTTATTTGGAAGCAGTTTCCTTTTTCAGG...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp ATGTACAAAGACAGTGTGGGAAAAATTAGTGTTGGCAGAGATGAAGCAGTTGTGGAGAGCGCACAAAAATaGAGGTGCGCCATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: MYKDSVGKISVGRDEAVVESAQK*RCAMAS
Trigger: AGAAGCCATGGCGCACCTCCATTTTTGTGCGCTCTC...CACAACTGCTTCATCTCTGCCAACACTAATTTTTCCCACACTGTCTTTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTAGAACTGTCCTCCTCTTaGCTTTTGTCCTTATTTCTC +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLELSSS*LLSLFL
Trigger: GAGAAATAAGGACAAAAGCCAAGAGGAGGACAGTTC...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp ATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCTCGGACTGGCTGGGATTTaGAACCTGCTGATTCGCTCT +
Preference number: 4 (lower is better)
Translates to: ISTNNEIFQSQTPGNTILGLAGI*NLLIRS
Trigger: AGAGCGAATCAGCAGGTTCCAAATCCCAGCCAGTCC...GAGGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAAGGCTGGCTTCTCTTTaGCTTCTGGGAGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKERLASL*LLGGLA
Trigger: AGCCAGTCCTCCCAGAAGCCAAAGAGAAGCCAGCCT...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp ATGTACAAAGACAGTGTGGGAAAAATTAGTGTTGGCAGAGATGAAGCAGTTGTGTGGGCACTGTTCTTCTaGGGACAGGTCTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: MYKDSVGKISVGRDEAVVWALFF*GQVFWL
Trigger: AAGCCAGAAGACCTGTCCCCAGAAGAACAGTGCCCA...CACAACTGCTTCATCTCTGCCAACACTAATTTTTCCCACACTGTCTTTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp AGTTTCCATAGCCATGTTCATAAATCCCCAGCAACAGGCGAGAATCATCTTCCAAGGAATGATATGGTCTaGATGGTCTTTCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SFHSHVHKSPATGENHLPRNDMV*MVFPRP
Trigger: GGGCCTAGGAAAGACCATCCAGACCATATCATTCCT...TGGAAGATGATTCTCGCCTGTTGCTGGGGATTTATGAACATGGCTATGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAGACACACAGCTGTTGTaGATCAGTTCACCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEDTQLL*ISSPRR
Trigger: GCGCCTGGGTGAACTGATCCACAACAGCTGTGTGTC...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CTACTCTATTTCTTCAAGCTGTGCAAAGGGAAGGAAATGCAGCAGGAAGTGTTGTTCTGGACATGTTGTTaGGTCGATAGCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: LLYFFKLCKGKEMQQEVLFWTCC*VDSFRN
Trigger: GTTCCGGAAGCTATCGACCCAACAACATGTCCAGAA...CAACACTTCCTGCTGCATTTCCTTCCCTTTGCACAGCTTGAAGAAATAGAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CCTCACCCCTGGGGTCTAGTAGTTCTCCTATTGAACTATAAGAATCTTTCTCTTATTAGCTGGAAGTGGTaGTGCGTGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: PHPWGLVVLLLNYKNLSLISWKW*CVPVIP
Trigger: TGGGATTACAGGCACGCACCACCACTTCCAGCTAAT...AAGAGAAAGATTCTTATAGTTCAATAGGAGAACTACTAGACCCCAGGGGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR CAA 72 bp GGCTACTGTAGGATCAGACCAAAAATATCCACGTGTTaGGTGACTCTTACTCTCTCCTTTACGAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GYCRIRPKISTC*VTLTLSFTSCP
Trigger: AGGACAGCTCGTAAAGGAGAGAGTAAGAGTCACCAAACACGTGGATATTTTTGGTCTGATCCTACAGTAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
3UTR CAA 72 bp ACCCTTCGAGGTAGCCAAGACACACACACTTTGACCTaGATGTACTTGTCAACATCATTCCTCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TLRGSQDTHTLT*MYLSTSFLFSS
Trigger: TGAGGAGAAGAGGAATGATGTTGACAAGTACATCAAGGTCAAAGTGTGTGTGTCTTGGCTACCTCGAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp CCTCACCCCTGGGGTCTAGTAGTTCTCCTATTGAACTATAAGAATCTTTCTCTTCTCTCAGATTCCGACTaGCTCTCAGAAGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: PHPWGLVVLLLNYKNLSLLSDSD*LSEDSE
Trigger: CTCTGAATCTTCTGAGAGTCAGTCGGAATCTGAGAG...AAGAGAAAGATTCTTATAGTTCAATAGGAGAACTACTAGACCCCAGGGGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp GCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCACTGGAGCTTTTCTCTTTCCACGCTaGGTCTTCGGCTGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: AVQQPQLPLKTHSMTTGAFLFPR*VFGCFL
Trigger: TAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAA...AGCTCCAGTGGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTTTCAATGAGATCATCTaGGTCAGTCTCAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLFNEII*VSLKVI
Trigger: GATGACTTTGAGACTGACTCAGATGATCTCATTGAA...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTGCTCCTGTTGGCAATTaGAATATTCTACATCTTCAG +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLAPVGN*NILHLQ
Trigger: CTGAAGATGTAGAATATTTCAATTGCCAACAGGAGC...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CCTCACCCCTGGGGTCTAGTAGTTCTCCTATTGAACTATAAGAATCTTTCTCTTGGAATTTCTTTCCAATaGGGGCTTCATCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PHPWGLVVLLLNYKNLSLGISFQ*GLHLPS
Trigger: GCTGGGAAGATGAAGCCCTCATTGGAAAGAAATTCC...AAGAGAAAGATTCTTATAGTTCAATAGGAGAACTACTAGACCCCAGGGGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp AAATATGCAGGTTGTTTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCGGAATTTCTTTCCAATaGGGGCTTCATCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KYAGCFFKATNRGLCFRAGISFQ*GLHLPS
Trigger: GCTGGGAAGATGAAGCCCTCATTGGAAAGAAATTCC...GGCCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACAACCTGCATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630016.1
CDS-3UTR TCA 90 bp TTTTCTTTCAGCTGCTCTTCGTATTCCTGCATTGCTGACACACAGCTGTTGTGGAACATTCTCACCATCTaGGAGAAGATAAGCACTCGA +
Preference number: 4 (lower is better)
Translates to: FSFSCSSYSCIADTQLLWNILTI*EKISTR
Trigger: TCGAGTGCTTATCTTCTCTCAGATGGTGAGAATGTT...CCACAACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTGAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAACAGACCCATCTGCATTaGAGTGGTCCAGTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEQTHLH*SGPVPV
Trigger: AACAGGCACTGGACCACTTCAATGCAGATGGGTCTG...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACTTTTGGCCCGTTCTATaGTCTCCTCCTCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHFWPVL*SPPPQS
Trigger: GGACTGTGGAGGAGGAGATCATAGAACGGGCCAAAA...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CTACTCTATTTCTTCAAGCTGTGCAAAGGGAAGGAAATGCAGCAGGAAGTGTTGACCCTGAGATCGCTTTaGTTTACTCGAAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: LLYFFKLCKGKEMQQEVLTLRSL*FTRRFG
Trigger: GCCAAATCTTCGAGTAAATCAAAGCGATCTCAGGGT...CAACACTTCCTGCTGCATTTCCTTCCCTTTGCACAGCTTGAAGAAATAGAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACTGTGAGGTATGGGACTaGGATATCAGAGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHCEVWD*DIRESR
Trigger: CCGGGACTCTCTGATATCTCAGTCCCATACCTCACA...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AGTCAGTTATTCTGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTAAAGTGCAGGAGTGGTaGCCCGAATCAGAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SQLFCLHLERPLDTLNNTKVQEW*PESELD
Trigger: GTCCAGCTCTGATTCGGGTCACCACTCCTGCACTTT...AGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACAGAATAACTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GGAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTCCATCATGTCAGAGTaGACCAAATCAACCAAATCA +
Preference number: 4 (lower is better)
Translates to: GDESSIPCSSFSLGTLFSSIMSE*TKSTKS
Trigger: TGATTTGGTTGATTTGGTTCACTCTGACATGATGGA...GGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTGGACCCCCACCTTTGTaGTTGCAACAAGTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PFATSYGTESPKCEQKEVGPPPL*LQQVGQ
Trigger: CTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCC...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GTTTATATTCCCCCAGTTTATCTGTGTGGAAAGAGCGGTAATGGTCTGAGGGTCAAGAGCCTGCTTAATTaGTGCAACCAAACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VYIPPVYLCGKSGNGLRVKSLLN*CNQTCF
Trigger: GAAGCAAGTTTGGTTGCATCAATTAAGCAGGCTCTT...GACCCTCAGACCATTACCGCTCTTTCCACACAGATAAACTGGGGGAATATAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR TCA 90 bp GCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCATCTCTCCCATTCACAAGTaGGAGAATTTACCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: AWTLTGTLYVQVSYSVSISPIHK*ENLPVQ
Trigger: TTGCACAGGTAAATTCTCTCACTTGTGAATGGGAGA...GATGGAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp ATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCTCTCTGAAAGACCGCAGTaGTTAGCTTGGGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: ISTNNEIFQSQTPGNTILSERPQ*LAWGFT
Trigger: GGTGAAACCCCAAGCTAATCACTGCGGTCTTTCAGA...GAGGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTAGTTACATCTGGCATCTaGCAAAAATTACTAGGCACA +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLVTSGI*QKLLGT
Trigger: TGTGCCTAGTAATTTTTGTCAGATGCCAGATGTAAC...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GCACCAATCCATTATACAAGGGCCAGATGCAGTTCAACAACCACAACTTCCTCTCTGATATTTCATTACTaGGGACCCAAGCACATCAGT +
Preference number: 4 (lower is better)
Translates to: APIHYTRARCSSTTTTSSLIFHY*GPKHIS
Trigger: ACTGATGTGCTTGGGTCCTCAGTAATGAAATATCAG...AGAGGAAGTTGTGGTTGTTGAACTGCATCTGGCCCTTGTATAATGGATTGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp ACATGGGCAATTCAATTAAGACAGCACTACAAACTGGGTGACAACTCAATGCAAGGGGGAATCTGTGTTTaGTTTGAAGTCCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TWAIQLRQHYKLGDNSMQGGICV*FEVLCP
Trigger: TGGGCACAGGACTTCAAAGCAAACACAGATTCCCCC...TTGCATTGAGTTGTCACCCAGTTTGTAGTGCTGTCTTAATTGAATTGCCCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000629346.2
CDS-3UTR GCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACTGCTGTTCGACTCGCTaGCATGTCCACTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHCCSTR*HVHFLD
Trigger: ATCCAGGAAGTGGACATGGCAGCGAGTCGAACAGCA...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAGCTCTTCGACGAGTCTaGCTTTTGGGAGCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEALRRV*LLGASS
Trigger: TGACGAAGCTCCCAAAAGGCAGACTCGTCGAAGAGC...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CTCCTCTTCATGTTGGATAATGGATTTCACATTAACCTGAACTCCGGATATCTTGCTCTTCGACGAGTCTaGCTTTTGGGAGCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: LLFMLDNGFHINLNSGYLALRRV*LLGASS
Trigger: TGACGAAGCTCCCAAAAGGCAGACTCGTCGAAGAGC...AAGATATCCGGAGTTCAGGTTAATGTGAAATCCATTATCCAACATGAAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTATATACAGTAGTAGATaGTCCAGTGGCTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLIYSSR*SSGSFL
Trigger: AAGAAAGGAGCCACTGGAGCATCTACTACTGTATAT...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTACCCGAGGATATACAGTAGTAGATaGTCCAGTGGCTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NSMLLFQPGHFVFLLYPRIYSSR*SSGSFL
Trigger: AAGAAAGGAGCCACTGGAGCATCTACTACTGTATAT...CCTCGGGTAAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp TTTCACATTAACCTGAACTCCGGATATCTTGATTGTTGGACCTCTCCTTTTCCCCTTCACTCTCCCATGTaGTGTGGATGTAAGACCAAC +
Preference number: 4 (lower is better)
Translates to: FHINLNSGYLDCWTSPFPLHSPM*CGCKTN
Trigger: GTTGGTCTTACATCCACAGCACATGGGAGAGTGAAG...GGGAAAAGGAGAGGTCCAACAATCAAGATATCCGGAGTTCAGGTTAATGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTTACGTTAATCTCTGGTaGCCAGATTTCAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLYVNLW*PDFKLS
Trigger: AGAGAGTTTGAAATCTGGGCACCAGAGATTAACGTA...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CACAGGTACTTATTTCCATCTGCCCACCACATGATGTGTGATTCTGTCTACTCTGAAAACCAGATGTGCTaGCTCTTGTTCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: HRYLFPSAHHMMCDSVYSENQMC*LLFLWQ
Trigger: TTGCCAAAGGAACAAGAGGCAGCACATCTGGTTTTC...AGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp ATGTACAAAGACAGTGTGGGAAAAATTAGTGTTGGCAGAGATGAAGCAGTTGTGGAAAGCTCAATTCCATaGTCCTCTTTCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MYKDSVGKISVGRDEAVVESSIP*SSFSLG
Trigger: GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTC...CACAACTGCTTCATCTCTGCCAACACTAATTTTTCCCACACTGTCTTTGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp TGTTTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCTTCTTTCACTTCACAAATCGTGGTCTCTaGTTCAGGGCCTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: CFFKATNRGLCFRAFFHFTNRGL*FRAFFH
Trigger: GTGAAAGAAGGCCCTGAAGCAGAGACCACGATTTGT...GAAGTGAAAGAAGGCCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000630016.1
ENST00000637613.1
CDS-3UTR GCA 90 bp TGGCATCTGACAAAAATTACTAGGCACAGAAAGCACCAGGGGAGCAAGACCCACAGGGAAAACCAAAGCTaGTATGAGGTTAAATTATCC +
Preference number: 4 (lower is better)
Translates to: WHLTKITRHRKHQGSKTHRENQS*YEVKLS
Trigger: GGATAATTTAACCTCATAGCAGCTTTGGTTTTCCCT...GTGGGTCTTGCTCCCCTGGTGCTTTCTGTGCCTAGTAATTTTTGTCAGATGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp TGGTGCAATGCAGCAATGGCTAAACCGACAAGGTCATTTTTCTGCAGTACAAAACATACCTCGATGCATTaGTGTGTAGCGAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: WCNAAMAKPTRSFFCSTKHTSMH*CVANCP
Trigger: AGGACAGTTCGCTACACAGCAATGCATCGAGGTATG...TTTTGTACTGCAGAAAAATGACCTTGTCGGTTTAGCCATTGCTGCATTGCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627622.1
CDS-3UTR GCA 90 bp AATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCGGCCTCAAACTCCTGTaGTCAAGCAATCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: NIFSAHMCPILFISISSPGLKLL*SSNPAA
Trigger: GGCGGCAGGATTGCTTGAGCACAGGAGTTTGAGGCC...GGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACGAGAGCGCACAAAAATaGAGGTGCGCCATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHESAQK*RCAMAS
Trigger: AGAAGCCATGGCGCACCTCCATTTTTGTGCGCTCTC...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CCTCTTAAAACCCATTCAATGACCACTGGAGCTCAGAGACTTCTACATTGGTGCGAACTGTCCTCCTCTTaGCTTTTGTCCTTATTTCTC +
Preference number: 4 (lower is better)
Translates to: PLKTHSMTTGAQRLLHWCELSSS*LLSLFL
Trigger: GAGAAATAAGGACAAAAGCCAAGAGGAGGACAGTTC...GCACCAATGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACTGGGCACTGTTCTTCTaGGGACAGGTCTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHWALFF*GQVFWL
Trigger: AAGCCAGAAGACCTGTCCCCAGAAGAACAGTGCCCA...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CTGAGCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCTTCCGACTATGAGCTaGAAAATCTGTTTGACCCAA +
Preference number: 4 (lower is better)
Translates to: LSLDTYRHTVCSSQLFCLLPTMS*KICLTQ
Trigger: TTGGGTCAAACAGATTTTCCAGCTCATAGTCGGAAG...GAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp TATCAGCAACTCAAGAGAGAAGCCCTGATGACTGTGGAAACCCTGATGGAAATGGAGTTGTTCCTACTGTaGAAGCTGTCAATGCAATTC +
Preference number: 4 (lower is better)
Translates to: YQQLKREALMTVETLMEMELFLL*KLSMQF
Trigger: GAATTGCATTGACAGCTTCCACAGTAGGAACAACTC...CATTTCCATCAGGGTTTCCACAGTCATCAGGGCTTCTCTCTTGAGTTGCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp GGGCCAGATGCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCGAGTTGTTCCTACTGTaGAAGCTGTCAATGCAATTC +
Preference number: 4 (lower is better)
Translates to: GPDAVQQPQLPLKTHSMTELFLL*KLSMQF
Trigger: GAATTGCATTGACAGCTTCCACAGTAGGAACAACTC...GGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGCATCTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTGAGCCTTGTAATTCCTaGTCAGAATCCACTTGTAAT +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLEPCNS*SESTCN
Trigger: ATTACAAGTGGATTCTGACCAGGAATTACAAGGCTC...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp TTATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCCCTCATCCTCTCCAATaGGGACAGGTTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: LFLPTMKSFKARLQGIPSPHPLQ*GQVHFL
Trigger: CAGGAAGTGAACCTGTCCCCATTGGAGAGGATGAGG...GGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CACAGGTACTTATTTCCATCTGCCCACCACATGATGTGTGATTCTGTCTACTCTATGCTGAATGTCTCCTaGTCCAGATCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: HRYLFPSAHHMMCDSVYSMLNVS*SRSSSS
Trigger: TGAGGATGATGATCTGGACCAGGAGACATTCAGCAT...AGAGTAGACAGAATCACACATCATGTGGTGGGCAGATGGAAATAAGTACCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAGGCCTCTGGACGAAATaGTTTCTTACCCCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEGLWTK*FLTPSH
Trigger: GTGACTGGGGGTAAGAAACCATTTCGTCCAGAGGCC...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp AATTTTAGAATCAATGTAACACTGATCTGGCCGATACTGCCTTTTGCTACTTCAAAGTGCCCGTCAAAGTaGGAGGCCAGAACTAGGCTG +
Preference number: 4 (lower is better)
Translates to: NFRINVTLIWPILPFATSKCPSK*EARTRL
Trigger: CAGCCTAGTTCTGGCCTCCCACTTTGACGGGCACTT...TGAAGTAGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATTGATTCTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ATCTGGCCGATACTGCCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTTGGGCAAGGCAATCATaGGCTAGAGTCAGTATTATC +
Preference number: 4 (lower is better)
Translates to: IWPILPFATSYGTESPKCWARQS*ARVSII
Trigger: GATAATACTGACTCTAGCCCATGATTGCCTTGCCCA...ACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGGCAGTATCGGCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp GATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCAATGTAACACTGATCTaGCCGATACTGCCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: DESSIPCSSFSLGTLFSFNVTLI*PILPFA
Trigger: AGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATT...GAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp ATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCTCATCCTCACAGATTCCTaGGGCAGCTTCTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: ISTNNEIFQSQTPGNTILILTDS*GSFSHS
Trigger: TGAATGGGAGAAGCTGCCCCAGGAATCTGTGAGGAT...GAGGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp TTATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCAGCGTGCAAAGTGTTTaGGCTTCCCTTCGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LFLPTMKSFKARLQGIPSSVQSV*ASLRRA
Trigger: AGCCCTTCGAAGGGAAGCCCAAACACTTTGCACGCT...GGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp TGTAGCTTTCCTTCTCACCACAGGAATCAGAAATCCACCAGGGATTCCAGTTCCCTGACAAGTGGATTTTaGTCTGTAGGATTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: CSFPSHHRNQKSTRDSSSLTSGF*SVGFQC
Trigger: ACACTGAAATCCTACAGACCAAAATCCACTTGTCAG...GGAACTGGAATCCCTGGTGGATTTCTGATTCCTGTGGTGAGAAGGAAAGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAGCTCCTGGCAAAGGTTaGCACCTGGTGTCTCACAGC +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETEAPGKG*HLVSHS
Trigger: GCTGTGAGACACCAGGTGCCAACCTTTGCCAGGAGC...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACCCTAGAAACAGCTCCTaGCAAAGGTTGGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHPRNSS*QRLAPG
Trigger: ACCAGGTGCCAACCTTTGCCAGGAGCTGTTTCTAGG...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CTCCTATTGAACTATAAGAATCTTTCTCTTGATACCTTTCACAGGAGGGCAATAGTGCCTAAATGCAACTaGGCATGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: LLLNYKNLSLDTFHRRAIVPKCN*AWWLTP
Trigger: AGGCGTGAGCCACCATGCCCAGTTGCATTTAGGCAC...TATTGCCCTCCTGTGAAAGGTATCAAGAGAAAGATTCTTATAGTTCAATAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp CTTCAGATCTGCCACCGACTTATCTACCAGCTCAGCATCACGTGCTATGCACTCGTGAAAGTCTTTTTATaGATGGCCTGTCTTTATCAT +
Preference number: 4 (lower is better)
Translates to: LQICHRLIYQLSITCYALVKVFL*MACLYH
Trigger: ATGATAAAGACAGGCCATCCATAAAAAGACTTTCAC...GAGTGCATAGCACGTGATGCTGAGCTGGTAGATAAGTCGGTGGCAGATCTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637789.1
CDS-3UTR TCA 90 bp AATTTTAGAATCAATGTAACACTGATCTGGCCGATACTGCCTTTTGCTACTTCAGAAAGTTGCGTAAAGTaGGGCAAAGGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NFRINVTLIWPILPFATSESCVK*GKGREQ
Trigger: CTGCTCCCTGCCTTTGCCTCACTTTACGCAACTTTC...TGAAGTAGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATTGATTCTAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp ACAAGGTACTCCAAGGAATGTGAAACAGATCATGATTTGCACAAACAGTACATTGAAAGTTGCGTAAAGTaGGGCAAAGGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TRYSKECETDHDLHKQYIESCVK*GKGREQ
Trigger: CTGCTCCCTGCCTTTGCCTCACTTTACGCAACTTTC...AATGTACTGTTTGTGCAAATCATGATCTGTTTCACATTCCTTGGAGTACCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627622.1
ENST00000629346.2
CDS-3UTR TCA 90 bp AATCATGGGCTAGAGTCAGTATTATCGGCAAGAAGCTCCATCTGTGGTTTCCTCTTCAATGAGATCATCTaGGTCAGTCTCAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: NHGLESVLSARSSICGFLFNEII*VSLKVI
Trigger: GATGACTTTGAGACTGACTCAGATGATCTCATTGAA...GAGGAAACCACAGATGGAGCTTCTTGCCGATAATACTGACTCTAGCCCATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CCTCTTAAAACCCATTCAATGACCACTGGAGCTCAGAGACTTCTACATTGGTGCTTCAATGAGATCATCTaGGTCAGTCTCAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: PLKTHSMTTGAQRLLHWCFNEII*VSLKVI
Trigger: GATGACTTTGAGACTGACTCAGATGATCTCATTGAA...GCACCAATGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp ACTCCCAGTTTCCATAGCCATGTTCATAAATCCCCAGCAACAGGCGAGAATCATTTCAATGAGATCATCTaGGTCAGTCTCAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: TPSFHSHVHKSPATGENHFNEII*VSLKVI
Trigger: GATGACTTTGAGACTGACTCAGATGATCTCATTGAA...ATGATTCTCGCCTGTTGCTGGGGATTTATGAACATGGCTATGGAAACTGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp ACCGGCTACTGTAGGATCAGACCAAAAATATCCACGTGTTTGGTGACTCTTACTTGTTGGGATGGTTTTTaGGTTGTTCCTACTGTGGAA +
Preference number: 4 (lower is better)
Translates to: TGYCRIRPKISTCLVTLTCWDGF*VVPTVE
Trigger: TTCCACAGTAGGAACAACTCAAAAACCATCCCAACA...AGTAAGAGTCACCAAACACGTGGATATTTTTGGTCTGATCCTACAGTAGCCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp GCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCACTGGAGCTTGTTGGGATGGTTTTTaGGTTGTTCCTACTGTGGAA +
Preference number: 4 (lower is better)
Translates to: AVQQPQLPLKTHSMTTGACWDGF*VVPTVE
Trigger: TTCCACAGTAGGAACAACTCAAAAACCATCCCAACA...AGCTCCAGTGGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAAGTCAGAGTCAAAGATaGCGACTGTGTCCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKESQSQR*RLCPLK
Trigger: CTTCAGCGGACACAGTCGTCATCTTTGACTCTGACT...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AGTCAGTTATTCTGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTTTTTGGCCCGTTCTATaGTCTCCTCCTCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: SQLFCLHLERPLDTLNNTFWPVL*SPPPQS
Trigger: GGACTGTGGAGGAGGAGATCATAGAACGGGCCAAAA...AGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACAGAATAACTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTAGATTTCACATTAACCTaGACTCCGGATATCTTGATT +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLDFTLT*TPDILI
Trigger: AATCAAGATATCCGGAGTTCAGGTTAATGTGAAATC...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTGGAAACACATCCCAGTaGAGCTGGTACACACACAGT +
Preference number: 4 (lower is better)
Translates to: PFATSYGTESPKCEQKEVGNTSQ*SWYTHS
Trigger: ACTGTGTGTGTACCAGCTTCACTGGGATGTGTTTCC...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp TTCGGCTCATCGTACTACTGGTGGCATTGTACTGAAGTAAAGAGGGTGCAGCTTCAGGCAAAAGGAAAGTaGCATCAAATAGAAATACAG +
Preference number: 4 (lower is better)
Translates to: FGSSYYWWHCTEVKRVQLQAKGK*HQIEIQ
Trigger: CTGTATTTCTATTTGATGTCACTTTCCTTTTGCCTG...AAGCTGCACCCTCTTTACTTCAGTACAATGCCACCAGTAGTACGATGAGCCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp CCTCTTAAAACCCATTCAATGACCACTGGAGCTCAGAGACTTCTACATTGGTGCAGCACATCAGTTTCCTaGTGGAATAAATTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PLKTHSMTTGAQRLLHWCSTSVS*WNKFQG
Trigger: TCCTTGGAATTTATTCCATCAGGAAACTGATGTGCT...GCACCAATGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp TCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGCCAGATGCAGTTGACGTATCACTTGTCTaGTATTTCATTACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: SCLYSQQHQSIIQGPDAVDVSLV*YFITED
Trigger: GTCCTCAGTAATGAAATATCAGACAAGTGATACGTC...AACTGCATCTGGCCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp GGGCCAGATGCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCCTAGTGCCATTAACATaGATGTCAACTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GPDAVQQPQLPLKTHSMTLVPLT*MSTSQR
Trigger: TCTCTGAGAAGTTGACATTCATGTTAATGGCACTAG...GGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGCATCTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp CTGAGCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCATATACAGTAGTAGATaGTCCAGTGGCTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSLDTYRHTVCSSQLFCLIYSSR*SSGSFL
Trigger: AAGAAAGGAGCCACTGGAGCATCTACTACTGTATAT...GAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp GGGCCAGATGCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCATATACAGTAGTAGATaGTCCAGTGGCTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GPDAVQQPQLPLKTHSMTIYSSR*SSGSFL
Trigger: AAGAAAGGAGCCACTGGAGCATCTACTACTGTATAT...GGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGCATCTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp CCTCCTAAATATGCAGGTTGTTTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCCTTCACTCTCCCATGTaGTGTGGATGTAAGACCAAC +
Preference number: 4 (lower is better)
Translates to: PPKYAGCFFKATNRGLCFLHSPM*CGCKTN
Trigger: GTTGGTCTTACATCCACAGCACATGGGAGAGTGAAG...GAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACAACCTGCATATTTAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637613.1
CDS-3UTR GCA 90 bp GCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCACTGGAGCTCCCTTCACTTTCTGTTaGTGTAAGGATTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: AVQQPQLPLKTHSMTTGAPFTFC*CKDSSL
Trigger: GAGTGAAGAATCCTTACAGCAACAGAAAGTGAAGGG...AGCTCCAGTGGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp AAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCTTCTTTCACTTCAAAATGGCACCCTTCACTTTCTGTTaGTGTAAGGATTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: KATNRGLCFRAFFHFKMAPFTFC*CKDSSL
Trigger: GAGTGAAGAATCCTTACAGCAACAGAAAGTGAAGGG...TGCCATTTTGAAGTGAAAGAAGGCCCTGAAGCAGAGACCACGATTTGTAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637613.1
CDS-3UTR GCA 90 bp CTGAGCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCTACGTTAATCTCTGGTaGCCAGATTTCAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: LSLDTYRHTVCSSQLFCLYVNLW*PDFKLS
Trigger: AGAGAGTTTGAAATCTGGGCACCAGAGATTAACGTA...GAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp GAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTGATGGATTATCTGAATaGCTAGGAGATGAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: EMKAQFHAPLSAWALCFPDGLSE*LGDESS
Trigger: TGAGCTTTCATCTCCTAGGCATTCAGATAATCCATC...AGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625662.2
ENST00000629104.1
ENST00000636881.1
CDS-3UTR GCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACGTCGAGCTGTTTCAGTaGCTTTTTCACGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHVELFQ*LFHGPH
Trigger: ATGAGGCCCGTGAAAAAGGCACTGAAACAGCTCGAC...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CTAAATATGCAGGTTGTTTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAGGGACAAATCGTGGTCTCTaGTTCAGGGCCTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LNMQVVSLKLQIVVSASGTNRGL*FRAFFH
Trigger: GTGAAAGAAGGCCCTGAAGCAGAGACCACGATTTGT...CCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACAACCTGCATATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000630016.1
ENST00000637613.1
CDS-3UTR CCA 90 bp CTCCTATTGAACTATAAGAATCTTTCTCTTGATACCTTTCACAGGAGGGCAATAGAGAGCGCACAAAAATaGAGGTGCGCCATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLNYKNLSLDTFHRRAIESAQK*RCAMAS
Trigger: AGAAGCCATGGCGCACCTCCATTTTTGTGCGCTCTC...TATTGCCCTCCTGTGAAAGGTATCAAGAGAAAGATTCTTATAGTTCAATAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp CTTAGAGGCTTTATTACTTCATCACTAACAAGGTACTCCAAGGAATGTGAAACAGAGAGCGCACAAAAATaGAGGTGCGCCATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRGFITSSLTRYSKECETESAQK*RCAMAS
Trigger: AGAAGCCATGGCGCACCTCCATTTTTGTGCGCTCTC...TGTTTCACATTCCTTGGAGTACCTTGTTAGTGATGAAGTAATAAAGCCTCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627622.1
ENST00000629346.2
CDS-3UTR CCA 90 bp AGTCAGTTATTCTGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTGCCATGTCCACTTCCTaGATCACTTCCCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: SQLFCLHLERPLDTLNNTAMSTS*ITSLLT
Trigger: AGTGAGCAGGGAAGTGATCCAGGAAGTGGACATGGC...AGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACAGAATAACTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp CTCCTATTGAACTATAAGAATCTTTCTCTTGATACCTTTCACAGGAGGGCAATAGGACTGGCTGGGATTTaGAACCTGCTGATTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LLLNYKNLSLDTFHRRAIGLAGI*NLLIRS
Trigger: AGAGCGAATCAGCAGGTTCCAAATCCCAGCCAGTCC...TATTGCCCTCCTGTGAAAGGTATCAAGAGAAAGATTCTTATAGTTCAATAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp CCTCTTAAAACCCATTCAATGACCACTGGAGCTCAGAGACTTCTACATTGGTGCCACTTGATGAGGTACTaGATTTCACCTTCATCCTTT +
Preference number: 4 (lower is better)
Translates to: PLKTHSMTTGAQRLLHWCHLMRY*ISPSSF
Trigger: AAAGGATGAAGGTGAAATCCAGTACCTCATCAAGTG...GCACCAATGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp GAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTCTTCCGACTATGAGCTaGAAAATCTGTTTGACCCAA +
Preference number: 4 (lower is better)
Translates to: ESSIPCSSFSLGTLFSFFLPTMS*KICLTQ
Trigger: TTGGGTCAAACAGATTTTCCAGCTCATAGTCGGAAG...AAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp AAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCTTCTTTCACTTCAAAATGGCACTTCCGACTATGAGCTaGAAAATCTGTTTGACCCAA +
Preference number: 4 (lower is better)
Translates to: KATNRGLCFRAFFHFKMALPTMS*KICLTQ
Trigger: TTGGGTCAAACAGATTTTCCAGCTCATAGTCGGAAG...TGCCATTTTGAAGTGAAAGAAGGCCCTGAAGCAGAGACCACGATTTGTAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630016.1
ENST00000637613.1
CDS-3UTR CCA 90 bp AGACATTCGTCGGAAATCCTGCTGGTGGTAATTTTGAGGCCTAAATTCATCGGAATTGTAGTTATCTCTTaGGTGTCCATGCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: RHSSEILLVVILRPKFIGIVVIS*VSMHLW
Trigger: CCACAGATGCATGGACACCCAAGAGATAACTACAAT...TCCGATGAATTTAGGCCTCAAAATTACCACCAGCAGGATTTCCGACGAATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp TTTTCCGAACATTCCAGTTATAATCTGGGTTGTTTTTCTGTTCTAGTGATCTCTGTCGCTTCCCCATGGTaGATTGTTGTTGCCACCACC +
Preference number: 4 (lower is better)
Translates to: FSEHSSYNLGCFSVLVISVASPW*IVVATT
Trigger: GGTGGTGGCAACAACAATCCACCATGGGGAAGCGAC...AGAGATCACTAGAACAGAAAAACAACCCAGATTATAACTGGAATGTTCGGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000625662.2
ENST00000627460.1
CDS-3UTR CCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAGTCGCTTCCCCATGGTaGATTGTTGTTGCCACCACC +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETEVASPW*IVVATT
Trigger: GGTGGTGGCAACAACAATCCACCATGGGGAAGCGAC...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CTACTCTATTTCTTCAAGCTGTGCAAAGGGAAGGAAATGCAGCAGGAAGTGTTGAAGTCACTGTGTCTTTaGATGCTCCTTGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLYFFKLCKGKEMQQEVLKSLCL*MLLVWE
Trigger: TTCCCAAACAAGGAGCATCCAAAGACACAGTGACTT...CAACACTTCCTGCTGCATTTCCTTCCCTTTGCACAGCTTGAAGAAATAGAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp TGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTGGCAATCTATACTCGGGGGATCCAACTTaGCATGTCTTGGTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: CLHLERPLDTLNNTGNLYSGDPT*HVLVKA
Trigger: TGCCTTTACCAAGACATGCCAAGTTGGATCCCCCGA...GTATAGATTGCCAGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp TGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTGGCAATCTATACGCTTGGGGTTTCACCTaGCCCTTTTCTAAGGCCATA +
Preference number: 4 (lower is better)
Translates to: CLHLERPLDTLNNTGNLYAWGFT*PFSKAI
Trigger: TATGGCCTTAGAAAAGGGCCAGGTGAAACCCCAAGC...GTATAGATTGCCAGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCTAGGAGGGCAATACCCTaGGCCCCCTCTTGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: IFSQHICVQSSLSVYLLPRRAIP*APSCLY
Trigger: ATACAGACAAGAGGGGGCCCAGGGTATTGCCCTCCT...AGGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR CAA 72 bp CAAAATACCCTTCGAGGTAGCCAAGACACACACACTTaGACCTTGATGTACTTGTCAACATCATTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QNTLRGSQDTHT*TLMYLSTSFLF
Trigger: GAAGAGGAATGATGTTGACAAGTACATCAAGGTCAAAGTGTGTGTGTCTTGGCTACCTCGAAGGGTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp TTTAAGCTTCAGAAGATAAAGCATTCCAGACGACTCTGTCGAAATACATCAATAGAAAGTTGCGTAAAGTaGGGCAAAGGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FKLQKIKHSRRLCRNTSIESCVK*GKGREQ
Trigger: CTGCTCCCTGCCTTTGCCTCACTTTACGCAACTTTC...TATTGATGTATTTCGACAGAGTCGTCTGGAATGCTTTATCTTCTGAAGCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627622.1
CDS-3UTR TCA 90 bp ACATGGGCAATTCAATTAAGACAGCACTACAAACTGGGTGACAACTCAATGCAAAATCTGTGTTTGCTTTaGAGTCCTGTGCCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: TWAIQLRQHYKLGDNSMQNLCLL*SPVPRY
Trigger: ATACCTGGGCACAGGACTTCAAAGCAAACACAGATT...TTGCATTGAGTTGTCACCCAGTTTGTAGTGCTGTCTTAATTGAATTGCCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629346.2
CDS-3UTR TCA 90 bp CTCCTATTGAACTATAAGAATCTTTCTCTTGATACCTTTCACAGGAGGGCAATATCTTCAGAGGCTGAGTaGCTCGATGCATTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLLNYKNLSLDTFHRRAISSEAE*LDALLC
Trigger: ACACAGCAATGCATCGAGTCACTCAGCCTCTGAAGA...TATTGCCCTCCTGTGAAAGGTATCAAGAGAAAGATTCTTATAGTTCAATAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp CTCCTATTGAACTATAAGAATCTTTCTCTTGATACCTTTCACAGGAGGGCAATATTCGGTTTGACCGCCTaGCCCCATAAACATCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLLNYKNLSLDTFHRRAIFGLTA*PHKHQD
Trigger: ATCCTGATGTTTATGGGGTCAGGCGGTCAAACCGAA...TATTGCCCTCCTGTGAAAGGTATCAAGAGAAAGATTCTTATAGTTCAATAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp AATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCTTGTCTGCTTCGGTTTaGCCGCCTGACCCCATAAAC +
Preference number: 4 (lower is better)
Translates to: NIFSAHMCPILFISISSPLSASV*PPDPIN
Trigger: GTTTATGGGGTCAGGCGGTCAAACCGAAGCAGACAA...GGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp CTCCTCTTCATGTTGGATAATGGATTTCACATTAACCTGAACTCCGGATATCTTCTGTTTATTCAACTCTaGAGCCAGCTCCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLFMLDNGFHINLNSGYLLFIQL*SQLLLA
Trigger: TGCCAACAGGAGCTGGCTTCAGAGTTGAATAAACAG...AAGATATCCGGAGTTCAGGTTAATGTGAAATCCATTATCCAACATGAAGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR TCA 90 bp GTTCCAGATTCTCCCCTCCTAAATATGCAGGTTGTTTCTTTAAAGCTACAAATCCTGTTTATTCAACTCTaGAGCCAGCTCCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: VPDSPLLNMQVVSLKLQILFIQL*SQLLLA
Trigger: TGCCAACAGGAGCTGGCTTCAGAGTTGAATAAACAG...GATTTGTAGCTTTAAAGAAACAACCTGCATATTTAGGAGGGGAGAATCTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637613.1
CDS-3UTR TCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACGGAATTTCTTTCCAATaGGGGCTTCATCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHGISFQ*GLHLPS
Trigger: GCTGGGAAGATGAAGCCCTCATTGGAAAGAAATTCC...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAACAGGTAGGAGAGGAATaGTATGGTCTGGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEQVGEE*YGLDGL
Trigger: AAGACCATCCAGACCATATCATTCCTCTCCTACCTG...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AGTCAGTTATTCTGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTCCCCTTCCAGTTCTTTaGAGAGATCCTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SQLFCLHLERPLDTLNNTPLPVL*RDPLLQ
Trigger: TTGGAGCAGAGGATCTCTTCAAAGAACTGGAAGGGG...AGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACAGAATAACTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp ATGTACAAAGACAGTGTGGGAAAAATTAGTGTTGGCAGAGATGAAGCAGTTGTGTCTATATCCATTTCCTaGGGTTCTGATTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: MYKDSVGKISVGRDEAVVSISIS*GSDSSP
Trigger: AGGGGAGGAATCAGAACCTCAGGAAATGGATATAGA...CACAACTGCTTCATCTCTGCCAACACTAATTTTTCCCACACTGTCTTTGTACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTGACACCAGCAAGCACTaGAGTCCTCACAAGTTACTT +
Preference number: 4 (lower is better)
Translates to: PFATSYGTESPKCEQKEVDTSKH*SPHKLL
Trigger: AAGTAACTTGTGAGGACTTCAGTGCTTGCTGGTGTC...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR TCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAGGGATTCGCTGTGGCTaGCACATGCATGATGAGATC +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETEGIRCG*HMHDEI
Trigger: GATCTCATCATGCATGTGTCAGCCACAGCGAATCCC...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GGGCCAGATGCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCAAGTCAGCAAAGCCATaGAATAATTCATTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GPDAVQQPQLPLKTHSMTKSAKP*NNSFSP
Trigger: AGGAGAGAATGAATTATTTCATGGCTTTGCTGACTT...GGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGCATCTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp CTTAGAGGCTTTATTACTTCATCACTAACAAGGTACTCCAAGGAATGTGAAACAGCACAAAAATGGAGGTaGGCCATGGCTTCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: LRGFITSSLTRYSKECETAQKWR*AMASKL
Trigger: CAGCTTAGAAGCCATGGCGCACCTCCATTTTTGTGC...TGTTTCACATTCCTTGGAGTACCTTGTTAGTGATGAAGTAATAAAGCCTCTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627622.1
ENST00000629346.2
CDS-3UTR GCA 90 bp ATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCTTGCTGTTCGACTCGCTaGCATGTCCACTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: IFSQHICVQSSLSVYLLPCCSTR*HVHFLD
Trigger: ATCCAGGAAGTGGACATGGCAGCGAGTCGAACAGCA...AGGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACCACTCTCTGCACTGGTaGCTTGTTCCTGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHHSLHW*LVPVHL
Trigger: AAGATGAACAGGAACAAGGCACCAGTGCAGAGAGTG...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GTGCAAATGACGCACATCATCAGCCCAGGGAAAACCAAAGCTGCTATGAGGTTAGTTTCACTATTATCTTaGTGTTCATCAACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VQMTHIISPGKTKAAMRLVSLLS*CSSTPS
Trigger: AGAAGGAGTTGATGAACAGCAAGATAATAGTGAAAC...TAACCTCATAGCAGCTTTGGTTTTCCCTGGGCTGATGATGTGCGTCATTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACACAAATCGTGGTCTCTaGTTCAGGGCCTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHTNRGL*FRALHS
Trigger: AGAATGCAAGGCCCTGAAGCAGAGACCACGATTTGT...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCATCTTACACTATTATTTTTaGACCAGGAATGAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: AWTLTGTLYVQVSYSVSILHYYF*TRNELA
Trigger: GGCTAGCTCATTCCTGGTGCAAAAATAATAGTGTAA...GATGGAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp AATGGATTTCACATTAACCTGAACTCCGGATATCTTGATTGTTGGACCTCTCCTGAAAACCAGATGTGCTaGCTCTTGTTCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: NGFHINLNSGYLDCWTSPENQMC*LLFLWQ
Trigger: TTGCCAAAGGAACAAGAGGCAGCACATCTGGTTTTC...AGGAGAGGTCCAACAATCAAGATATCCGGAGTTCAGGTTAATGTGAAATCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp CTCCTCTTCATGTTGGATAATGGATTTCACATTAACCTGAACTCCGGATATCTTGAACCTTCGGATCTCTaGATCAGTAAATCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LLFMLDNGFHINLNSGYLEPSDL*ISKSLH
Trigger: GTGGAGGGATTTACTGATGCAGAGATCCGAAGGTTC...AAGATATCCGGAGTTCAGGTTAATGTGAAATCCATTATCCAACATGAAGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637789.1
CDS-3UTR GCA 90 bp CTACTCTATTTCTTCAAGCTGTGCAAAGGGAAGGAAATGCAGCAGGAAGTGTTGGCATTTTCTTTCAGCTaGTCTTCGTATTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: LLYFFKLCKGKEMQQEVLAFSFS*SSYSCI
Trigger: AATGCAGGAATACGAAGAGCAGCTGAAAGAAAATGC...CAACACTTCCTGCTGCATTTCCTTCCCTTTGCACAGCTTGAAGAAATAGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp AGTTTCCATAGCCATGTTCATAAATCCCCAGCAACAGGCGAGAATCATCTTCCAGATGGATTATCTGAATaGCTAGGAGATGAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SFHSHVHKSPATGENHLPDGLSE*LGDESS
Trigger: TGAGCTTTCATCTCCTAGGCATTCAGATAATCCATC...TGGAAGATGATTCTCGCCTGTTGCTGGGGATTTATGAACATGGCTATGGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAGACAGGTTCACTTCCTaGTGTAATATGGACAGGACC +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEDRFTS*CNMDRT
Trigger: GGTCCTGTCCATATTACAGCAGGAAGTGAACCTGTC...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AATTTTAGAATCAATGTAACACTGATCTGGCCGATACTGCCTTTTGCTACTTCACCCCACCTTTGTGATTaGAACAAGTTGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: NFRINVTLIWPILPFATSPHLCD*NKLVSR
Trigger: CCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGG...TGAAGTAGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATTGATTCTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ACCCTTGTTCACGTGCAGGTTTTAGGTGATGCTAACTCCCTCTTTCTCAACCTGAAATCAATGAAGAAATaGTTCCTTTTTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: TLVHVQVLGDANSLFLNLKSMKK*FLFPST
Trigger: TGTGCTGGGAAAAAGGAAGCATTTCTTCATTGATTT...CAGGTTGAGAAAGAGGGAGTTAGCATCACCTAAAACCTGCACGTGAACAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp AATATGCAGGTTGTTTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCTATTTTTCTACCTACTTaGACCAGGAATGAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: NMQVVSLKLQIVVSASGPIFLPT*TRNELA
Trigger: GGCTAGCTCATTCCTGGTGCAAGTAGGTAGAAAAAT...AGGCCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACAACCTGCATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000630016.1
ENST00000637613.1
CDS-3UTR GCA 90 bp AAATATGCAGGTTGTTTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCATTTTTCTACCTACTTaGACCAGGAATGAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: KYAGCFFKATNRGLCFRAIFLPT*TRNELA
Trigger: GGCTAGCTCATTCCTGGTGCAAGTAGGTAGAAAAAT...GGCCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACAACCTGCATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000630016.1
ENST00000637613.1
CDS-3UTR GCA 90 bp ACAAGGTACTCCAAGGAATGTGAAACAGATCATGATTTGCACAAACAGTACATTCGACTCTCGATGCATTaGTGTGTAGCGAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: TRYSKECETDHDLHKQYIRLSMH*CVANCP
Trigger: AGGACAGTTCGCTACACAGCAATGCATCGAGAGTCG...AATGTACTGTTTGTGCAAATCATGATCTGTTTCACATTCCTTGGAGTACCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629346.2
CDS-3UTR GCA 90 bp CCTCCTAAATATGCAGGTTGTTTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCACCATCACCATACCTTaGATTCTCTTGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: PPKYAGCFFKATNRGLCFTITIP*ILLLGW
Trigger: CCATCCCAACAAGAGAATGCAAGGTATGGTGATGGT...GAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACAACCTGCATATTTAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630016.1
CDS-3UTR GCA 90 bp TCTTGTCTGTATAGCCAGCAGCACCAATCCATTATACAAGGGCCAGATGCAGTTACTTCTCTTTTAAAGTaGCTAAATGCAACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SCLYSQQHQSIIQGPDAVTSLLK*LNATGH
Trigger: ATGCCCAGTTGCATTTAGGCACTTTAAAAGAGAAGT...AACTGCATCTGGCCCTTGTATAATGGATTGGTGCTGCTGGCTATACAGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACTTCCTTCTTAGAGGCTaGCTTCTCTTTGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHFLLRG*LLFGFW
Trigger: CCAGAAGCCAAAGAGAAGCCAGCCTCTAAGAAGGAA...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACGACGAGTCTGCCTTTTaGGAGCTTCGTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHDESAF*ELRHHH
Trigger: ATGATGATGACGAAGCTCCCAAAAGGCAGACTCGTC...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp GTTCCAGATTCTCCCCTCCTAAATATGCAGGTTGTTTCTTTAAAGCTACAAATCGACGAGTCTGCCTTTTaGGAGCTTCGTCATCATCAT +
Preference number: 4 (lower is better)
Translates to: VPDSPLLNMQVVSLKLQIDESAF*ELRHHH
Trigger: ATGATGATGACGAAGCTCCCAAAAGGCAGACTCGTC...GATTTGTAGCTTTAAAGAAACAACCTGCATATTTAGGAGGGGAGAATCTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637613.1
CDS-3UTR CCA 90 bp AGTTTCCATAGCCATGTTCATAAATCCCCAGCAACAGGCGAGAATCATCTTCCACACTTGATGAGGTACTaGATTTCACCTTCATCCTTT +
Preference number: 4 (lower is better)
Translates to: SFHSHVHKSPATGENHLPHLMRY*ISPSSF
Trigger: AAAGGATGAAGGTGAAATCCAGTACCTCATCAAGTG...TGGAAGATGATTCTCGCCTGTTGCTGGGGATTTATGAACATGGCTATGGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp AATATGCAGGTTGTTTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCTGAGTTGTTCCTACTGTaGAAGCTGTCAATGCAATTC +
Preference number: 4 (lower is better)
Translates to: NMQVVSLKLQIVVSASGPELFLL*KLSMQF
Trigger: GAATTGCATTGACAGCTTCCACAGTAGGAACAACTC...AGGCCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACAACCTGCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630016.1
CDS-3UTR CCA 90 bp AAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTAGAGTTGTTCCTACTGTaGAAGCTGTCAATGCAATTC +
Preference number: 4 (lower is better)
Translates to: KAQFHAPLSAWALCFPSLELFLL*KLSMQF
Trigger: GAATTGCATTGACAGCTTCCACAGTAGGAACAACTC...TAAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR CCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAAGGAATGATATGGTCTaGATGGTCTTTCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKERNDMV*MVFPRP
Trigger: GGGCCTAGGAAAGACCATCCAGACCATATCATTCCT...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTTCCGCTTCTTTAATTTaGCCTCTTCCCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: PFATSYGTESPKCEQKEVSASLI*PLPHLS
Trigger: TGACAGGTGGGGAAGAGGCCAAATTAAAGAAGCGGA...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAATTCTGGACATGTTGTTaGGTCGATAGCTTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEFWTCC*VDSFRN
Trigger: GTTCCGGAAGCTATCGACCCAACAACATGTCCAGAA...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAATCAATTATGGGCTCGTaGCAGGTAAGGACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETESIMGS*QVRTVG
Trigger: GCCCACAGTCCTTACCTGCCACGAGCCCATAATTGA...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CCTCACCCCTGGGGTCTAGTAGTTCTCCTATTGAACTATAAGAATCTTTCTCTTGTGAGCCACTGCAACTaGCTTCACTTCTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: PHPWGLVVLLLNYKNLSLVSHCN*LHFSFK
Trigger: TTTAAAAGAGAAGTGAAGCCAGTTGCAGTGGCTCAC...AAGAGAAAGATTCTTATAGTTCAATAGGAGAACTACTAGACCCCAGGGGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp TGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTGGCAATCTATACAATCTGTGTTTGCTTTaGAGTCCTGTGCCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: CLHLERPLDTLNNTGNLYNLCLL*SPVPRY
Trigger: ATACCTGGGCACAGGACTTCAAAGCAAACACAGATT...GTATAGATTGCCAGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAAGCTTCTTCAGAGGCTaGGTGACTCGATGCATTGCT +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETESFFRG*VTRCIA
Trigger: AGCAATGCATCGAGTCACTCAGCCTCTGAAGAAGCT...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAATTTCTCTTTCCACGCTaGGTCTTCGGCTGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEFLFPR*VFGCFL
Trigger: TAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAA...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AGTCAGTTATTCTGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTCTGTTTATTCAACTCTaGAGCCAGCTCCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SQLFCLHLERPLDTLNNTLFIQL*SQLLLA
Trigger: TGCCAACAGGAGCTGGCTTCAGAGTTGAATAAACAG...AGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACAGAATAACTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp TCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCTTCTTTCACTTCAAAATGTTGGGATGGTTTTTaGGTTGTTCCTACTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SLKLQIVVSASGPSFTSKCWDGF*VVPTVE
Trigger: TTCCACAGTAGGAACAACTCAAAAACCATCCCAACA...TTTTGAAGTGAAAGAAGGCCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630016.1
CDS-3UTR TCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAATCTATATCCATTTCCTaGGGTTCTGATTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKESISIS*GSDSSP
Trigger: AGGGGAGGAATCAGAACCTCAGGAAATGGATATAGA...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAATATGGACAGGACCCTaGGATCGCTTTGATTTACTC +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEIWTGP*DRFDLL
Trigger: GAGTAAATCAAAGCGATCTCAGGGTCCTGTCCATAT...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTATCCTGTGATGACATATaGGCCATGCAAATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: KAQFHAPLSAWALCFPSLSCDDI*AMQIVK
Trigger: TTTGACAATTTGCATGGCTCATATGTCATCACAGGA...TAAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636881.1
CDS-3UTR GCA 90 bp AAGCTTCAGAAGATAAAGCATTCCAGACGACTCTGTCGAAATACATCAATAAATGCACAAAAATGGAGGTaGGCCATGGCTTCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: KLQKIKHSRRLCRNTSINAQKWR*AMASKL
Trigger: CAGCTTAGAAGCCATGGCGCACCTCCATTTTTGTGC...ATTTATTGATGTATTTCGACAGAGTCGTCTGGAATGCTTTATCTTCTGAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627622.1
CDS-3UTR GCA 90 bp TTTAAGCTTCAGAAGATAAAGCATTCCAGACGACTCTGTCGAAATACATCAATAGGGGGAATCTGTGTTTaGTTTGAAGTCCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: FKLQKIKHSRRLCRNTSIGGICV*FEVLCP
Trigger: TGGGCACAGGACTTCAAAGCAAACACAGATTCCCCC...TATTGATGTATTTCGACAGAGTCGTCTGGAATGCTTTATCTTCTGAAGCTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627622.1
CDS-3UTR GCA 90 bp GCCTGGACACTTACAGGCACACTGTATGTTCAAGTCAGTTATTCTGTCTCCATCGTTTCACTATTATCTTaGTGTTCATCAACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AWTLTGTLYVQVSYSVSIVSLLS*CSSTPS
Trigger: AGAAGGAGTTGATGAACAGCAAGATAATAGTGAAAC...GATGGAGACAGAATAACTGACTTGAACATACAGTGTGCCTGTAAGTGTCCAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp CTCCTATTGAACTATAAGAATCTTTCTCTTGATACCTTTCACAGGAGGGCAATACTTCACTCTCCCATGTaGTGTGGATGTAAGACCAAC +
Preference number: 4 (lower is better)
Translates to: LLLNYKNLSLDTFHRRAILHSPM*CGCKTN
Trigger: GTTGGTCTTACATCCACAGCACATGGGAGAGTGAAG...TATTGCCCTCCTGTGAAAGGTATCAAGAGAAAGATTCTTATAGTTCAATAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACGAAAACCAGATGTGCTaGCTCTTGTTCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHENQMC*LLFLWQ
Trigger: TTGCCAAAGGAACAAGAGGCAGCACATCTGGTTTTC...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTATTGAAGTGGTCCAGTaGCTGTTTTCGGATTTCTCC +
Preference number: 4 (lower is better)
Translates to: PFATSYGTESPKCEQKEVIEVVQ*LFSDFS
Trigger: GGAGAAATCCGAAAACAGGCACTGGACCACTTCAAT...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR GCA 90 bp TCTGTCTCCACCGGCAGAATTTTGTCAGTTAATTTAAGCTCTGGGTCTGTTTTACTCTACATCAAAATGTaGAGCTTTGACACGACAGGT +
Preference number: 4 (lower is better)
Translates to: SVSTGRILSVNLSSGSVLLYIKM*SFDTTG
Trigger: ACCTGTCGTGTCAAAGCTGCACATTTTGATGTAGAG...TAAAACAGACCCAGAGCTTAAATTAACTGACAAAATTCTGCCGGTGGAGACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR GCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAGAAAGCTCAATTCCATaGTCCTCTTTCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETEESSIP*SSFSLG
Trigger: GCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTC...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp GAGATGAAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTCAATTGAAAAGAGCCTaGTTAATTGATGCAACCAAA +
Preference number: 4 (lower is better)
Translates to: EMKAQFHAPLSAWALCFPQLKRA*LIDATK
Trigger: TTTGGTTGCATCAATTAAGCAGGCTCTTTTCAATTG...AGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTTCATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR GCA 90 bp ATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCTACAGGTGTGAGCCACTaGAACTGGCTTCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: IFSQHICVQSSLSVYLLPTGVSH*NWLHFS
Trigger: AGAGAAGTGAAGCCAGTTGCAGTGGCTCACACCTGT...AGGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp GATTCTCCCCTCCTAAATATGCAGGTTGTTTCTTTAAAGCTACAAATCGTGGTCCTTCCGACTATGAGCTaGAAAATCTGTTTGACCCAA +
Preference number: 4 (lower is better)
Translates to: DSPLLNMQVVSLKLQIVVLPTMS*KICLTQ
Trigger: TTGGGTCAAACAGATTTTCCAGCTCATAGTCGGAAG...GACCACGATTTGTAGCTTTAAAGAAACAACCTGCATATTTAGGAGGGGAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630016.1
ENST00000637613.1
CDS-3UTR CCA 90 bp GCAGTTCAACAACCACAACTTCCTCTTAAAACCCATTCAATGACCACTGGAGCTCTGTCAATGCAATTCTaGAATTTCTTTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: AVQQPQLPLKTHSMTTGALSMQF*NFFPMR
Trigger: CCTCATTGGAAAGAAATTCCAGAATTGCATTGACAG...AGCTCCAGTGGTCATTGAATGGGTTTTAAGAGGAAGTTGTGGTTGTTGAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAATGCCTCTTGTTCCTTTaGCAAGAGCCTTGTAATTCC +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKECLLFL*QEPCNS
Trigger: GGAATTACAAGGCTCTTGCCAAAGGAACAAGAGGCA...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp AATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCTCTTCTCCTCACCCCTaGGGTCTAGTAGTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: NIFSAHMCPILFISISSPSSPHP*GLVVLL
Trigger: TAGGAGAACTACTAGACCCCAGGGGTGAGGAGAAGA...GGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACTTCCTGTTCATCTTCTaGGGGTTCCTGTTTCCATTT +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHFLFIF*GFLFPF
Trigger: AAATGGAAACAGGAACCCTCAGAAGATGAACAGGAA...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp TCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCTTCTTTCACTTCAAAAGCTCCTGTTGGCAATTaGAATATTCTACATCTTCAG +
Preference number: 4 (lower is better)
Translates to: SLKLQIVVSASGPSFTSKAPVGN*NILHLQ
Trigger: CTGAAGATGTAGAATATTTCAATTGCCAACAGGAGC...TTTTGAAGTGAAAGAAGGCCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637613.1
CDS-3UTR TCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAACTGTTTATTCAACTCTaGAGCCAGCTCCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETELFIQL*SQLLLA
Trigger: TGCCAACAGGAGCTGGCTTCAGAGTTGAATAAACAG...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAAGGGTGAAGGTTGTGTaGGGTATGGGACTGAGATAT +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETERVKVV*GMGLRY
Trigger: ATATCTCAGTCCCATACCTCACACAACCTTCACCCT...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp GCAACTCATAACAAAGCTCCAGAATACTTACAGGAATACAGAAATATCCAGCACAGCTTCAGAAGACTTTaGCTCTTCAATTATGGGCTC +
Preference number: 4 (lower is better)
Translates to: ATHNKAPEYLQEYRNIQHSFRRL*LFNYGL
Trigger: GAGCCCATAATTGAAGAGTCAAAGTCTTCTGAAGCT...GTGCTGGATATTTCTGTATTCCTGTAAGTATTCTGGAGCTTTGTTATGAGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAAGTGACTCGATGCATTaGTGTGTAGCGAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETESDSMH*CVANCP
Trigger: AGGACAGTTCGCTACACAGCAATGCATCGAGTCACT...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCAGTGACTCGATGCATTaGTGTGTAGCGAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: NIFSAHMCPILFISISSPSDSMH*CVANCP
Trigger: AGGACAGTTCGCTACACAGCAATGCATCGAGTCACT...GGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAAGAAAACTCTTTTCCTaGACAGGTGAAATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKERKLFS*TGEMCS
Trigger: GGAGCACATTTCACCTGTGCAGGAAAAGAGTTTTCT...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAACTTCCGACTATGAGCTaGAAAATCTGTTTGACCCAA +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKELPTMS*KICLTQ
Trigger: TTGGGTCAAACAGATTTTCCAGCTCATAGTCGGAAG...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAATTGTAGTTATCTCTTaGGTGTCCATGCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEIVVIS*VSMHLW
Trigger: CCACAGATGCATGGACACCCAAGAGATAACTACAAT...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp TTATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCAAGTCACTGTGTCTTTaGATGCTCCTTGTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LFLPTMKSFKARLQGIPSKSLCL*MLLVWE
Trigger: TTCCCAAACAAGGAGCATCCAAAGACACAGTGACTT...GGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTAATGTAACACTGATCTaGCCGATACTGCCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PFATSYGTESPKCEQKEVNVTLI*PILPFA
Trigger: AGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATT...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AAGCTTCAGAAGATAAAGCATTCCAGACGACTCTGTCGAAATACATCAATAAATGGTGCAATGCAGCAATaGCTAAACCGACAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: KLQKIKHSRRLCRNTSINGAMQQ*LNRQGH
Trigger: ATGACCTTGTCGGTTTAGCCATTGCTGCATTGCACC...ATTTATTGATGTATTTCGACAGAGTCGTCTGGAATGCTTTATCTTCTGAAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627622.1
CDS-3UTR CCA 90 bp CTCCTATTGAACTATAAGAATCTTTCTCTTGATACCTTTCACAGGAGGGCAATAAAAATTAGCTGGAAGTaGTGGTGCGTGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LLLNYKNLSLDTFHRRAIKISWK*WCVPVI
Trigger: GATTACAGGCACGCACCACCACTTCCAGCTAATTTT...TATTGCCCTCCTGTGAAAGGTATCAAGAGAAAGATTCTTATAGTTCAATAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp AAAGCTCAATTCCATGCTCCTCTTTCAGCCTGGGCACTTTGTTTTCCTTCTTTATTGTCAAAAATAGAGTaGACTCAATCCTTGCACTTC +
Preference number: 4 (lower is better)
Translates to: KAQFHAPLSAWALCFPSLLSKIE*TQSLHF
Trigger: GAAGTGCAAGGATTGAGTCCACTCTATTTTTGACAA...TAAAGAAGGAAAACAAAGTGCCCAGGCTGAAAGAGGAGCATGGAATTGAGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636881.1
3UTR CAA 72 bp AAATGCAAAGTACACTGGATGGGCCTCACAGCAGTCTaGACATTGAAAAGGAAAGTATTAGTGAACTTGAAG +
Preference number: 4 (lower is better)
Translates to: KCKVHWMGLTAV*TLKRKVLVNLK
Trigger: CTTCAAGTTCACTAATACTTTCCTTTTCAATGTCAAGACTGCTGTGAGGCCCATCCAGTGTACTTTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAAATCTGTGTTTGCTTTaGAGTCCTGTGCCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETENLCLL*SPVPRY
Trigger: ATACCTGGGCACAGGACTTCAAAGCAAACACAGATT...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp TTTAAGCTTCAGAAGATAAAGCATTCCAGACGACTCTGTCGAAATACATCAATAAATCTGTGTTTGCTTTaGAGTCCTGTGCCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: FKLQKIKHSRRLCRNTSINLCLL*SPVPRY
Trigger: ATACCTGGGCACAGGACTTCAAAGCAAACACAGATT...TATTGATGTATTTCGACAGAGTCGTCTGGAATGCTTTATCTTCTGAAGCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627622.1
CDS-3UTR TCA 90 bp AATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCAATCTGTGTTTGCTTTaGAGTCCTGTGCCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: NIFSAHMCPILFISISSPNLCLL*SPVPRY
Trigger: ATACCTGGGCACAGGACTTCAAAGCAAACACAGATT...GGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR TCA 90 bp CTCCTAAATATGCAGGTTGTTTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCATTCAATGAGATCATCTaGGTCAGTCTCAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: LLNMQVVSLKLQIVVSASFNEII*VSLKVI
Trigger: GATGACTTTGAGACTGACTCAGATGATCTCATTGAA...TGAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACAACCTGCATATTTAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637613.1
CDS-3UTR TCA 90 bp CCTTTTGCTACTTCATATGGCACTGAGAGTCCTAAATGTGAACAAAAGGAAGTTGCTCCTGTTGGCAATTaGAATATTCTACATCTTCAG +
Preference number: 4 (lower is better)
Translates to: PFATSYGTESPKCEQKEVAPVGN*NILHLQ
Trigger: CTGAAGATGTAGAATATTTCAATTGCCAACAGGAGC...AACTTCCTTTTGTTCACATTTAGGACTCTCAGTGCCATATGAAGTAGCAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp AATTTTAGAATCAATGTAACACTGATCTGGCCGATACTGCCTTTTGCTACTTCATCACTGTCATTTGTCTaGGCCTTTTTAGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: NFRINVTLIWPILPFATSSLSFV*AFLVEL
Trigger: GAGTTCCACTAAAAAGGCTCAGACAAATGACAGTGA...TGAAGTAGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATTGATTCTAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR TCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAATCTCCTTACATATGCTaGATGTCTCCTGGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETESPYIC*MSPGPD
Trigger: ATCTGGACCAGGAGACATTCAGCATATGTAAGGAGA...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCTTAAAACCCATTCAATaGCCACTGGAGCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: NIFSAHMCPILFISISSPLKPIQ*PLELRD
Trigger: GTCTCTGAGCTCCAGTGGTCATTGAATGGGTTTTAA...GGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp GTTCCAGATTCTCCCCTCCTAAATATGCAGGTTGTTTCTTTAAAGCTACAAATCATATACAGTAGTAGATaGTCCAGTGGCTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VPDSPLLNMQVVSLKLQIIYSSR*SSGSFL
Trigger: AAGAAAGGAGCCACTGGAGCATCTACTACTGTATAT...GATTTGTAGCTTTAAAGAAACAACCTGCATATTTAGGAGGGGAGAATCTGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637613.1
CDS-3UTR GCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAACAGGGATAGATTTATaGAGCATCTCAAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKETGIDL*SISNSS
Trigger: AGAGGAGTTTGAGATGCTGCATAAATCTATCCCTGT...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AATTTTAGAATCAATGTAACACTGATCTGGCCGATACTGCCTTTTGCTACTTCACTCTACATCAAAATGTaGAGCTTTGACACGACAGGT +
Preference number: 4 (lower is better)
Translates to: NFRINVTLIWPILPFATSLYIKM*SFDTTG
Trigger: ACCTGTCGTGTCAAAGCTGCACATTTTGATGTAGAG...TGAAGTAGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATTGATTCTAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp TGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTGGCAATCTATACGATGGATTATCTGAATaGCTAGGAGATGAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: CLHLERPLDTLNNTGNLYDGLSE*LGDESS
Trigger: TGAGCTTTCATCTCCTAGGCATTCAGATAATCCATC...GTATAGATTGCCAGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR GCA 90 bp ACAAACACTGAAAGAGTTTATCACCAGCAGAAAAAGTCCTTCAGGCAAAAGGAAGATGGATTATCTGAATaGCTAGGAGATGAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: TNTERVYHQQKKSFRQKEDGLSE*LGDESS
Trigger: TGAGCTTTCATCTCCTAGGCATTCAGATAATCCATC...TTCCTTTTGCCTGAAGGACTTTTTCTGCTGGTGATAAACTCTTTCAGTGTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp ATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCTACCATCACCATACCTTaGATTCTCTTGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: IFSQHICVQSSLSVYLLPTITIP*ILLLGW
Trigger: CCATCCCAACAAGAGAATGCAAGGTATGGTGATGGT...AGGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628375.2
ENST00000630016.1
CDS-3UTR GCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAAGCTCTCCCTGGACTTaGTACTCTCACAATGTAAAG +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETESSPWT*YSHNVK
Trigger: CTTTACATTGTGAGAGTAGCAAGTCCAGGGAGAGCT...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp CTTAGAGGCTTTATTACTTCATCACTAACAAGGTACTCCAAGGAATGTGAAACAGAACTGTCCTCCTCTTaGCTTTTGTCCTTATTTCTC +
Preference number: 4 (lower is better)
Translates to: LRGFITSSLTRYSKECETELSSS*LLSLFL
Trigger: GAGAAATAAGGACAAAAGCCAAGAGGAGGACAGTTC...TGTTTCACATTCCTTGGAGTACCTTGTTAGTGATGAAGTAATAAAGCCTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627622.1
ENST00000629346.2
CDS-3UTR CCA 90 bp ACAAGGTACTCCAAGGAATGTGAAACAGATCATGATTTGCACAAACAGTACATTGAACTGTCCTCCTCTTaGCTTTTGTCCTTATTTCTC +
Preference number: 4 (lower is better)
Translates to: TRYSKECETDHDLHKQYIELSSS*LLSLFL
Trigger: GAGAAATAAGGACAAAAGCCAAGAGGAGGACAGTTC...AATGTACTGTTTGTGCAAATCATGATCTGTTTCACATTCCTTGGAGTACCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627622.1
ENST00000629346.2
CDS-3UTR CCA 90 bp CTCCTAAATATGCAGGTTGTTTCTTTAAAGCTACAAATCGTGGTCTCTGCTTCACACTTGATGAGGTACTaGATTTCACCTTCATCCTTT +
Preference number: 4 (lower is better)
Translates to: LLNMQVVSLKLQIVVSASHLMRY*ISPSSF
Trigger: AAAGGATGAAGGTGAAATCCAGTACCTCATCAAGTG...TGAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACAACCTGCATATTTAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637613.1
CDS-3UTR CCA 90 bp CTCCTATTGAACTATAAGAATCTTTCTCTTGATACCTTTCACAGGAGGGCAATACTTCCGACTATGAGCTaGAAAATCTGTTTGACCCAA +
Preference number: 4 (lower is better)
Translates to: LLLNYKNLSLDTFHRRAILPTMS*KICLTQ
Trigger: TTGGGTCAAACAGATTTTCCAGCTCATAGTCGGAAG...TATTGCCCTCCTGTGAAAGGTATCAAGAGAAAGATTCTTATAGTTCAATAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CCA 90 bp ATTTCTACCAACAATGAAATCTTTCAAAGCCAGACTCCAGGGAATACCATCCTCCTGTCAATGCAATTCTaGAATTTCTTTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: ISTNNEIFQSQTPGNTILLSMQF*NFFPMR
Trigger: CCTCATTGGAAAGAAATTCCAGAATTGCATTGACAG...GAGGATGGTATTCCCTGGAGTCTGGCTTTGAAAGATTTCATTGTTGGTAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp TCTTTAAAGCTACAAATCGTGGTCTCTGCTTCAGGGCCTTCTTTCACTTCAAAACTGTCAATGCAATTCTaGAATTTCTTTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: SLKLQIVVSASGPSFTSKLSMQF*NFFPMR
Trigger: CCTCATTGGAAAGAAATTCCAGAATTGCATTGACAG...TTTTGAAGTGAAAGAAGGCCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630016.1
CDS-3UTR CCA 90 bp TTTTCCGAACATTCCAGTTATAATCTGGGTTGTTTTTCTGTTCTAGTGATCTCTATGCTGAATGTCTCCTaGTCCAGATCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: FSEHSSYNLGCFSVLVISMLNVS*SRSSSS
Trigger: TGAGGATGATGATCTGGACCAGGAGACATTCAGCAT...AGAGATCACTAGAACAGAAAAACAACCCAGATTATAACTGGAATGTTCGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625662.2
CDS-3UTR CCA 90 bp CTTAGAGGCTTTATTACTTCATCACTAACAAGGTACTCCAAGGAATGTGAAACAGACAGCACTACAAACTaGGTGACAACTCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: LRGFITSSLTRYSKECETDSTTN*VTTQCK
Trigger: TTTGCATTGAGTTGTCACCCAGTTTGTAGTGCTGTC...TGTTTCACATTCCTTGGAGTACCTTGTTAGTGATGAAGTAATAAAGCCTCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629346.2
CDS-3UTR CCA 90 bp ACAAGGTACTCCAAGGAATGTGAAACAGATCATGATTTGCACAAACAGTACATTGCCTTGTATGTAAAATaGTGCAATGCAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: TRYSKECETDHDLHKQYIALYVK*CNAAMA
Trigger: AGCCATTGCTGCATTGCACCATTTTACATACAAGGC...AATGTACTGTTTGTGCAAATCATGATCTGTTTCACATTCCTTGGAGTACCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627622.1
CDS-3UTR CCA 90 bp AATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCCCATTCAATGACCACTaGAGCTCAGAGACTTCTACA +
Preference number: 4 (lower is better)
Translates to: NIFSAHMCPILFISISSPPFNDH*SSETST
Trigger: TGTAGAAGTCTCTGAGCTCCAGTGGTCATTGAATGG...GGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628375.2
3UTR CAA 72 bp GATAGATTTATGCAGCATCTCAAACTCCTCTTCATGTaGGATAATGGATTTCACATTAACCTGAACTCCGGA +
Preference number: 4 (lower is better)
Translates to: DRFMQHLKLLFM*DNGFHINLNSG
Trigger: TCCGGAGTTCAGGTTAATGTGAAATCCATTATCCAACATGAAGAGGAGTTTGAGATGCTGCATAAATCTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636881.1
ENST00000637789.1
CDS-3UTR TCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAATGTTGGGATGGTTTTTaGGTTGTTCCTACTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETECWDGF*VVPTVE
Trigger: TTCCACAGTAGGAACAACTCAAAAACCATCCCAACA...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AGTCAGTTATTCTGTCTCCATCTAGAAAGGCCTTTGGATACTCTTAACAATACTCTCAGACCCGCTACTTaGCTCTTCCTTAATATTAAA +
Preference number: 4 (lower is better)
Translates to: SQLFCLHLERPLDTLNNTLRPAT*LFLNIK
Trigger: TTTAATATTAAGGAAGAGGCAAGTAGCGGGTCTGAG...AGTATTGTTAAGAGTATCCAAAGGCCTTTCTAGATGGAGACAGAATAACTGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CCA 90 bp ATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCTCAGAGACTTCTACATTaGTGCTTCTCTGACCACATT +
Preference number: 4 (lower is better)
Translates to: IFSQHICVQSSLSVYLLPQRLLH*CFSDHI
Trigger: AATGTGGTCAGAGAAGCACCAATGTAGAAGTCTCTG...AGGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp AATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCCTCAGACCCGCTACTTaGCTCTTCCTTAATATTAAA +
Preference number: 4 (lower is better)
Translates to: NIFSAHMCPILFISISSPLRPAT*LFLNIK
Trigger: TTTAATATTAAGGAAGAGGCAAGTAGCGGGTCTGAG...GGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp GAAGTTCCAGATTCTCCCCTCCTAAATATGCAGGTTGTTTCTTTAAAGCTACAAGTTTCACTATTATCTTaGTGTTCATCAACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EVPDSPLLNMQVVSLKLQVSLLS*CSSTPS
Trigger: AGAAGGAGTTGATGAACAGCAAGATAATAGTGAAAC...TTGTAGCTTTAAAGAAACAACCTGCATATTTAGGAGGGGAGAATCTGGAACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637613.1
CDS-3UTR CCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAGTAATCAGGAGCCTATaGTTGGACTTGAAATCAATC +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETEVIRSL*LDLKSI
Trigger: GATTGATTTCAAGTCCAACCATAGGCTCCTGATTAC...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR TCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAGCCTATGGTTGGACTTaGAATCAATCAGAGTTTTAT +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETEAYGWT*NQSEFY
Trigger: ATAAAACTCTGATTGATTTCAAGTCCAACCATAGGC...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp CTCCTATTGAACTATAAGAATCTTTCTCTTGATACCTTTCACAGGAGGGCAATAGTTTCACTATTATCTTaGTGTTCATCAACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLNYKNLSLDTFHRRAIVSLLS*CSSTPS
Trigger: AGAAGGAGTTGATGAACAGCAAGATAATAGTGAAAC...TATTGCCCTCCTGTGAAAGGTATCAAGAGAAAGATTCTTATAGTTCAATAGGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAATTACACTATTATTTTTaGACCAGGAATGAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETELHYYF*TRNELA
Trigger: GGCTAGCTCATTCCTGGTGCAAAAATAATAGTGTAA...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR GCA 90 bp AATTTTAGAATCAATGTAACACTGATCTGGCCGATACTGCCTTTTGCTACTTCAAAATCAATGAAGAAATaGTTCCTTTTTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: NFRINVTLIWPILPFATSKSMKK*FLFPST
Trigger: TGTGCTGGGAAAAAGGAAGCATTTCTTCATTGATTT...TGAAGTAGCAAAAGGCAGTATCGGCCAGATCAGTGTTACATTGATTCTAAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CCA 90 bp AGTATTAGTGAACTTGAAGAGGTAGCAATAGAAACTATCCACAGTGAAACAGAAAATATTAAATCGCGATaGTTCTTGTCTGCTTCGGTT +
Preference number: 4 (lower is better)
Translates to: SISELEEVAIETIHSETENIKSR*FLSASV
Trigger: AACCGAAGCAGACAAGAACCATCGCGATTTAATATT...TTCTGTTTCACTGTGGATAGTTTCTATTGCTACCTCTTCAAGTTCACTAATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CCA 90 bp ATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCTAATATTAAATCGCGATaGTTCTTGTCTGCTTCGGTT +
Preference number: 4 (lower is better)
Translates to: IFSQHICVQSSLSVYLLPNIKSR*FLSASV
Trigger: AACCGAAGCAGACAAGAACCATCGCGATTTAATATT...AGGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR GCA 90 bp TTTAAGCTTCAGAAGATAAAGCATTCCAGACGACTCTGTCGAAATACATCAATATTGTATGTAAAATGGTaGAATGCAGCAATGGCTAAA +
Preference number: 4 (lower is better)
Translates to: FKLQKIKHSRRLCRNTSILYVKW*NAAMAK
Trigger: TTTAGCCATTGCTGCATTGCACCATTTTACATACAA...TATTGATGTATTTCGACAGAGTCGTCTGGAATGCTTTATCTTCTGAAGCTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627622.1
CDS-3UTR CCA 90 bp ATATTTTCTCAGCACATATGTGTCCAATCCTCTTTATCAGTATATCTTCTCCCTCCCTATCACACTCTTTaGCAATTAAATACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: IFSQHICVQSSLSVYLLPPYHTL*QLNTGF
Trigger: AAAACCAGTATTTAATTGCCAAAGAGTGTGATAGGG...AGGGAGAAGATATACTGATAAAGAGGATTGGACACATATGTGCTGAGAAAATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628375.2
CDS-3UTR CAA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCGCTGACACACAGCTGTaGTGGATCAGTTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGADTQL*WISSPR
Trigger: CCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGC...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CAA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTCTTCAAGTCCTATGCTaGTCCCCACCCGCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPLQVLC*SPPACP
Trigger: GGGGCAAGCGGGTGGGGACAAGCATAGGACTTGAAG...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CAA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCGAAAGTTTCCCCCACTaGCTGGCACTACTGAACCCC +
Preference number: 5 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGESFPH*LALLNP
Trigger: GGGGTTCAGTAGTGCCAGCAAGTGGGGGAAACTTTC...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CAA 90 bp CTGCACCAGGACCCCCACCTTTGTGATTGCAACAAGTTGGTCAGCAGGCCTGCCAAGCAGCCTGGACCCTaGGCATGGCTCCCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: LHQDPHLCDCNKLVSRPAKQPGP*AWLPSP
Trigger: GGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTT...GGCAGGCCTGCTGACCAACTTGTTGCAATCACAAAGGTGGGGGTCCTGGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS GCA 90 bp ACACACTACAGGGTGCGGACCGCTACAGGCAAGGGCGGACAAGACTaGCAGGAGCAAACGCGTCCAGGAAAGAAGCCGCCCACCGGAAAG +
Preference number: 5 (lower is better)
Translates to: THYRVRTATGKGGQD*QEQTRPGKKPPTGK
Trigger: CTTTCCGGTGGGCGGCTTCTTTCCTGGACGCGTTTGCTCCTGGCAGTCTTGTCCGCCCTTGCCTGTAGCGGTCCGCACCCTGTAGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626782.2
CDS-3UTR CAA 90 bp TGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCAGGACTGGCTGGGATTaGGAACCTGCTGATTCGCTC +
Preference number: 5 (lower is better)
Translates to: WPKAAWTLGMAPLAQRGSRTGWD*EPADSL
Trigger: GAGCGAATCAGCAGGTTCCAAATCCCAGCCAGTCCT...GCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CAA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCCCAGGCCACCAGCCCTaGTCGAGAGCAGGAAACAGA +
Preference number: 5 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPPGHQP*SRAGNR
Trigger: TCTGTTTCCTGCTCTCGACAAGGGCTGGTGGCCTGG...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CAA 90 bp TGGCCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCGCAGTCACCGGAGCTTaGCTTCAGGACATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: WPKAAWTLGMAPLAQRGSAVTGA*LQDMCA
Trigger: AGCACACATGTCCTGAAGCAAAGCTCCGGTGACTGC...GCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CAA 90 bp CTCCCAACGCTCAAGGGCTCGACAAGCCAACCTAACCTTCCTCTTTGGCTTGGGAAGCAGCCTGGACCCTaGGCATGGCTCCCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: LPTLKGSTSQPNLPLWLGKQPGP*AWLPSP
Trigger: GGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTT...CCCAAGCCAAAGAGGAAGGTTAGGTTGGCTTGTCGAGCCCTTGAGCGTTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CAA 90 bp GCCCTGCCCTCTCCACTGAGCGTCACGGCAGGCCCTCCATGGGAGGACTGTGGCCCAACTTGGCATGTCTaGGTAAAGGCATTCATGGTG +
Preference number: 5 (lower is better)
Translates to: ALPSPLSVTAGPPWEDCGPTWHV*VKAFMV
Trigger: CACCATGAATGCCTTTACCAAGACATGCCAAGTTGG...GCCACAGTCCTCCCATGGAGGGCCTGCCGTGACGCTCAGTGGAGAGGGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394196.9
ENST00000625662.2
CDS-3UTR CAA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCTCTATGCGCTCGGGCTaGTGCCTGCAAGTCATTCTG +
Preference number: 5 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPSMRSG*CLQVIL
Trigger: CAGAATGACTTGCAGGCACAAGCCCGAGCGCATAGA...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CAA 90 bp CCTAAAGCAGCCTGGACCCTTGGCATGGCTCCCCTCGCCCAACGTGGCAGCCCTTCCCCTTCCAGTTCTTaGAAGAGATCCTCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: PKAAWTLGMAPLAQRGSPSPSSS*KRSSAP
Trigger: TGGAGCAGAGGATCTCTTCAAAGAACTGGAAGGGGA...AGGGCTGCCACGTTGGGCGAGGGGAGCCATGCCAAGGGTCCAGGCTGCTTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394196.9
CDS-3UTR CAA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCGCTGACACACAGCTGTaGTGGATCAGTTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPADTQL*WISSPR
Trigger: CCTGGGTGAACTGATCCACAACAGCTGTGTGTCAGC...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UTR CAA 90 bp GATGCCCACTGGGTCCAGACAATAGAGAAGGGTGGGAGCGAGGGGCAGTCTCCCGTGTTCCAGCTGTTCTaGCACGTTGAGCCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: DAHWVQTIEKGGSEGQSPVFQLF*HVEPLV
Trigger: GACAAGGGGCTCAACGTGCAAGAACAGCTGGAACAC...GGGAGACTGCCCCTCGCTCCCACCCTTCTCTATTGTCTGGACCCAGTGGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626874.2
CDS-3UT