RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000153922

Ensembl transcript IDs: ENST00000284049.7, ENST00000505657.1, ENST00000511067.2, ENST00000512844.5, ENST00000514344.5, ENST00000614616.5

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATGGTACTGAGTTAAGTGTCTATCAGAGGAATAACTGTCCCTGCTaGTATCATCGTGATTTGTATTCTCTTTTAATCTTTCCACATCTG +
Preference number: 1 (lower is better)
Translates to: HGTELSVYQRNNCPC*YHRDLYSLLIFPHL
Trigger: CAGATGTGGAAAGATTAAAAGAGAATACAAATCACGATGATAGCAGCAGGGACAGTTATTCCTCTGATAGACACTTAACTCAGTACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
3UTR-3UTR GCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTGGGATAATAGACCTTaGATCCTGGAAAGAAGTAAC +
Preference number: 2 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRWDNRP*ILERSN
Trigger: GTTACTTCTTTCCAGGATGCAAGGTCTATTATCCCA...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
3UTR-3UTR GCA 90 bp TACTCCAGGTATGCTCCGGTGTACTTTTGTGTTCAACTGAATGTTCAAATGGAGAGGAATAACTGTCCCTaGTGCTATCATCGTGATTTG +
Preference number: 2 (lower is better)
Translates to: YSRYAPVYFCVQLNVQMERNNCP*CYHRDL
Trigger: CAAATCACGATGATAGCAGCAGGGACAGTTATTCCT...CTCCATTTGAACATTCAGTTGAACACAAAAGTACACCGGAGCATACCTGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512844.5
3UTR-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATTTAATAAGAAGGCCTaGGTTGGTAGGGAAAGGAAC +
Preference number: 2 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKFNKKA*VGRERN
Trigger: GTTCCTTTCCCTACCAACTCAGGCCTTCTTATTAAA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
3UTR-3UTR TCA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAAATGGGAGGGCAGTGTTaGGGTCCCTGTAATAGTAAA +
Preference number: 2 (lower is better)
Translates to: KYKASHNNICRKPKGANKMGGQC*GPCNSK
Trigger: TTTACTATTACAGGGACCTCAACACTGCCCTCCCAT...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614616.5
3UTR-3UTR TCA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAATTTAATAAGAAGGCCTaGGTTGGTAGGGAAAGGAAC +
Preference number: 2 (lower is better)
Translates to: GSKNAAENYRSPHILFLKFNKKA*VGRERN
Trigger: GTTCCTTTCCCTACCAACTCAGGCCTTCTTATTAAA...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
3UTR-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAGGCCGTTTTGGATTCTaGAAAGTGTTTATACACCTA +
Preference number: 2 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKGRFGF*KVFIHL
Trigger: TAGGTGTATAAACACTTTTCAGAATCCAAAACGGCC...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
3UTR-3UTR GCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATGGGATAATAGACCTTaGATCCTGGAAAGAAGTAAC +
Preference number: 2 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKWDNRP*ILERSN
Trigger: GTTACTTCTTTCCAGGATGCAAGGTCTATTATCCCA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
3UTR-3UTR CCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTATTTTCTCTTCTGTTaGGATAATAGACCTTGCATC +
Preference number: 2 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRYFLFC*DNRPCI
Trigger: GATGCAAGGTCTATTATCCCAACAGAAGAGAAAATA...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
3UTR-3UTR GCA 90 bp AAGATTTATGGTGCGTATATTCAGAACTTGACCGGTGGTCTGAATGTAACCGATTGTCACTGTAATATCTaGTGTCTTGCTTGTAGTGAT +
Preference number: 2 (lower is better)
Translates to: KIYGAYIQNLTGGLNVTDCHCNI*CLACSD
Trigger: ATCACTACAAGCAAGACAGCAGATATTACAGTGACA...ATCGGTTACATTCAGACCACCGGTCAAGTTCTGAATATACGCACCATAAATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512844.5
3UTR-3UTR TCA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAATCTTTCATTCCTTCCTaGAACATGATCACAGGTCAG +
Preference number: 2 (lower is better)
Translates to: KYKASHNNICRKPKGANKSFIPS*NMITGQ
Trigger: CTGACCTGTGATCATGTTTCAGGAAGGAATGAAAGA...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614616.5
3UTR-3UTR GCA 90 bp AATGTAACCGATGATCTGAGTGAGAACGATGATCAGAATGAGATCTATCTTTTAAGGAATAACTGTCCCTaGTGCTATCATCGTGATTTG +
Preference number: 2 (lower is better)
Translates to: NVTDDLSENDDQNEIYLLRNNCP*CYHRDL
Trigger: CAAATCACGATGATAGCAGCAGGGACAGTTATTCCT...TAAAAGATAGATCTCATTCTGATCATCGTTCTCACTCAGATCATCGGTTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
3UTR-3UTR TCA 90 bp AATGTAACCGATGATCTGAGTGAGAACGATGATCAGAATGAGATCTATCTTTTAGGATTTCTAATCACGTaGGGATTCAAGTTGCTGTTT +
Preference number: 2 (lower is better)
Translates to: NVTDDLSENDDQNEIYLLGFLIT*GFKLLF
Trigger: AAACAGCAACTTGAATCCTCACGTGATTAGAAATCC...TAAAAGATAGATCTCATTCTGATCATCGTTCTCACTCAGATCATCGGTTACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512844.5
3UTR-3UTR GCA 90 bp ACCGATGATCTGAGTGAGAACGATGATCAGAATGAGATCTATCTTTTAAACTTCAATAACTGTCCCTGCTaGTATCATCGTGATTTGTAT +
Preference number: 2 (lower is better)
Translates to: TDDLSENDDQNEIYLLNFNNCPC*YHRDLY
Trigger: ATACAAATCACGATGATAGCAGCAGGGACAGTTATT...GAAGTTTAAAAGATAGATCTCATTCTGATCATCGTTCTCACTCAGATCATCGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
3UTR TCA 72 bp GCCACTGCTGGAAGCTCTGTGGTCCATTTGCCAGTCTaGGTGATACCTATAATCCCTGGAAGATTTATGGTG +
Preference number: 3 (lower is better)
Translates to: ATAGSSVVHLPV*VIPIIPGRFMV
Trigger: CACCATAAATCTTCCAGGGATTATAGGTATCACTCAGACTGGCAAATGGACCACAGAGCTTCCAGCAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512844.5
3UTR-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAATAAGAAGGCCTGAGTaGGTAGGGAAAGGAACAGTC +
Preference number: 3 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKIRRPE*VGKGTV
Trigger: GACTGTTCCTTTCCCTACCAACTCAGGCCTTCTTAT...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
3UTR-3UTR CAA 90 bp TTGACCGGTGGTCTGAATGTAACCGATGATCTGAGTGAGAACGATGATCAGAATGTAATATCTGCTGTCTaGCTTGTAGTGATCCCAATC +
Preference number: 3 (lower is better)
Translates to: LTGGLNVTDDLSENDDQNVISAV*LVVIPI
Trigger: GATTGGGATCACTACAAGCAAGACAGCAGATATTAC...ATTCTGATCATCGTTCTCACTCAGATCATCGGTTACATTCAGACCACCGGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
3UTR-3UTR CAA 90 bp TGGAAGATTTATGGTGCGTATATTCAGAACTTGACCGGTGGTCTGAATGTAACCGTTTTGATCACTGTTTaGCTGAGACTCCTGCCGTTT +
Preference number: 3 (lower is better)
Translates to: WKIYGAYIQNLTGGLNVTVLITV*LRLLPF
Trigger: AAACGGCAGGAGTCTCAGCAAAACAGTGATCAAAAC...GGTTACATTCAGACCACCGGTCAAGTTCTGAATATACGCACCATAAATCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512844.5
3UTR-3UTR CAA 90 bp TACTCCAGGTATGCTCCGGTGTACTTTTGTGTTCAACTGAATGTTCAAATGGAGGTAATATCTGCTGTCTaGCTTGTAGTGATCCCAATC +
Preference number: 3 (lower is better)
Translates to: YSRYAPVYFCVQLNVQMEVISAV*LVVIPI
Trigger: GATTGGGATCACTACAAGCAAGACAGCAGATATTAC...CTCCATTTGAACATTCAGTTGAACACAAAAGTACACCGGAGCATACCTGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512844.5
3UTR CCA 72 bp TACTTTTGTGTTCAACTGAATGTTCAAATGGAGATCTaGAGCCATAAGGAGATCTCTGATCTAGTGGTGACC +
Preference number: 3 (lower is better)
Translates to: YFCVQLNVQMEI*SHKEISDLVVT
Trigger: GGTCACCACTAGATCAGAGATCTCCTTATGGCTCCAGATCTCCATTTGAACATTCAGTTGAACACAAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512844.5
3UTR-3UTR CAA 90 bp GAAGATTTATGGTGCGTATATTCAGAACTTGACCGGTGGTCTGAATGTAACCGAATTCAAGTTGCTGTTTaGATCACTGTTTTGCTGAGA +
Preference number: 3 (lower is better)
Translates to: EDLWCVYSELDRWSECNRIQVAV*ITVLLR
Trigger: TCTCAGCAAAACAGTGATCAAAACAGCAACTTGAAT...TCGGTTACATTCAGACCACCGGTCAAGTTCTGAATATACGCACCATAAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512844.5
3UTR GCA 72 bp ACTGAGTTAAGTGTCTATCAGAGGAATAACTGTCCCTaGTGCTATCATCGTGATTTGTATTCTCTTTTAATC +
Preference number: 3 (lower is better)
Translates to: TELSVYQRNNCP*CYHRDLYSLLI
Trigger: GATTAAAAGAGAATACAAATCACGATGATAGCAGCAGGGACAGTTATTCCTCTGATAGACACTTAACTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
3UTR GCA 72 bp GAGTTAAGTGTCTATCAGAGGAATAACTGTCCCTGCTaGTATCATCGTGATTTGTATTCTCTTTTAATCTTT +
Preference number: 3 (lower is better)
Translates to: ELSVYQRNNCPC*YHRDLYSLLIF
Trigger: AAAGATTAAAAGAGAATACAAATCACGATGATAGCAGCAGGGACAGTTATTCCTCTGATAGACACTTAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
3UTR CCA 72 bp ATTTTCTCTTCTGTTGGGATAATAGACCTTGCATCCTaGAAAGAAGTAACAATACTGCTACTGATAGAAGAT +
Preference number: 3 (lower is better)
Translates to: IFSSVGIIDLAS*KEVTILLLIED
Trigger: ATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCTATTATCCCAACAGAAGAGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAATTCACCGGCGGGCTTaGCGGGGCGGAGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKIHRRA*RGGGSR
Trigger: TCGGCTCCCTCCGCCCCGCCAAGCCCGCCGGTGAAT...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTTCTGGGACTCTCCTTTaGTTCACCGGCGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVASGTLL*FTGGLG
Trigger: GCCAAGCCCGCCGGTGAATCAAAGGAGAGTCCCAGA...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR GCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCGACGTAAGCGCCTCTaGTCACTCCCCTTCCCGACA +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVARRKRL*SLPFPT
Trigger: TGTCGGGAAGGGGAGTGAGCAGAGGCGCTTACGTCG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTTTCCCAGCTGCACTCTaGGTATGGAAGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAFPAAL*VWKALP
Trigger: TGGCAGGGCCTTCCATACTCAGAGTGCAGCTGGGAA...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGCAACGCGCGATCCCCTaGGGAGTGGAGCTAACAATT +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRQRAIP*GVELTI
Trigger: AATTGTTAGCTCCACTCCGCAGGGGATCGCGCGTTG...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACCTGCTGGAAGCTCTGTaGTCCATTTGCCAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNLLEAL*SICQSE
Trigger: CTCAGACTGGCAAATGGACCACAGAGCTTCCAGCAG...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGAGAGTCACTGCTACCTaGCTGGCTACTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRRVTAT*LATASI
Trigger: GATGGAAGCAGTAGCCAGTCAGGTAGCAGTGACTCT...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACGAATCTGAACCAGACTaGGATGGAGATCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNESEPD*DGDPDP
Trigger: TGGGTCAGGATCTCCATCTCAGTCTGGTTCAGATTC...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTGAATCTGAACCAGACTaGGATGGAGATCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAESEPD*DGDPDP
Trigger: TGGGTCAGGATCTCCATCTCAGTCTGGTTCAGATTC...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTGCTCTAGCCTGTGCCTaGAGATCATTCTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAALACA*RSFCGF
Trigger: GAATCCACAGAATGATCTTCAGGCACAGGCTAGAGC...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACGCTCTAGCCTGTGCCTaGAGATCATTCTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNALACA*RSFCGF
Trigger: GAATCCACAGAATGATCTTCAGGCACAGGCTAGAGC...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCCACTTGCCGTGATATaGACTGGAGCATCTGACACT +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAPLAVI*TGASDT
Trigger: AGTGTCAGATGCTCCAGTTCATATCACGGCAAGTGG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACGTTCACCACTTGCCGTaGTATGAACTGGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNVHHLP*YELEHL
Trigger: CAGATGCTCCAGTTCATATCACGGCAAGTGGTGAAC...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACCTGCTTCTTGAGGATTaGAGATCTCTGAACGGCCAG +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNLLLED*RSLNGQ
Trigger: CTGGCCGTTCAGAGATCTGCAATCCTCAAGAAGCAG...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACTGCTGCTGCTGCTGTTaGTGCTTCTTGAGGATTGCA +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNCCCCC*CFLRIA
Trigger: TGCAATCCTCAAGAAGCAGCAACAGCAGCAGCAGCA...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp ATTCAGAACTTGACCGGTGGTCTGAATGTAACCGATGATCTGAGTGAGAACGATCTGCTGGAAGCTCTGTaGTCCATTTGCCAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: IQNLTGGLNVTDDLSENDLLEAL*SICQSE
Trigger: CTCAGACTGGCAAATGGACCACAGAGCTTCCAGCAG...ATCGTTCTCACTCAGATCATCGGTTACATTCAGACCACCGGTCAAGTTCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTAGGATTGCAGATCTCTaGACGGCCAGAATACTAGGA +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVARIADL*TARILG
Trigger: TCCTAGTATTCTGGCCGTTCAGAGATCTGCAATCCT...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTGCTGTTGCTGCTTCTTaGGGATTGCAGATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAAVAAS*GLQISE
Trigger: TTCAGAGATCTGCAATCCTCAAGAAGCAGCAACAGC...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTTCCCAGCTGCACTCTaGGTATGGAAGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVFPAAL*VWKALP
Trigger: TGGCAGGGCCTTCCATACTCAGAGTGCAGCTGGGAA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACATGGGAGGGCAGTGTTaGGGTCCCTGTAATAGTAAA +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNMGGQC*GPCNSK
Trigger: TTTACTATTACAGGGACCTCAACACTGCCCTCCCAT...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCTAACAATTCATTATTaGAGCACCAAGGGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVALTIHY*STKGEG
Trigger: GCCCTCGCCCTTGGTGCTTCAATAATGAATTGTTAG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR GCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTTACCTGACTGGCTACTaGTTCCATCACTACTGCTTC +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAYLTGY*FHHYCF
Trigger: GAAGCAGTAGTGATGGAAGCAGTAGCCAGTCAGGTA...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACATCTCCTACTTCTACTaGGCCTCCCTTCACTTCCAT +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNISYFY*ASLHFH
Trigger: ATGGAAGTGAAGGGAGGCGCAGTAGAAGTAGGAGAT...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACAACTGGTTCACCACTTaGCGTGATATGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNNWFTT*RDMNWS
Trigger: GCTCCAGTTCATATCACGGCAAGTGGTGAACCAGTT...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACGTCTCCCAAGTGTTGTaGATATGGGACCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNVSQVL*IWDHPF
Trigger: GAAAGGATGGTCCCATATCCACAACACTTGGGAGAC...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGCCGAGGAATAGTCCGTaGTCTTCCACGTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRPRNSP*SSTFLW
Trigger: CCAAAGAAACGTGGAAGACCACGGACTATTCCTCGG...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACGAAACTTTTTGGAAATaGGAGCTCCATCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNETFWK*ELHLPS
Trigger: GCTGGGAAGATGGAGCTCTCATTTCCAAAAAGTTTC...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGAATGTTCAAAAAGCCTaGGGTACTGCCCTTGGAACC +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRNVQKA*GTALGT
Trigger: GGTTCCAAGGGCAGTACCTCAGGCTTTTTGAACATT...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACTGGCCTTTTCCCTTCTaGGATGGAATCACTATCAGA +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNWPFPF*DGITIR
Trigger: TCTGATAGTGATTCCATCTCAGAAGGGAAAAGGCCA...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTGCTTTTCTCCTCTTTaGACTTCCCGCACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRCFSPL*TSRTRK
Trigger: CTTTCTGGTGCGGGAAGTTCAAAGAGGAGAAAAGCA...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTTTCATCAGACTTCTCTaGAGGCAGAGGAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAFIRLL*RQRRRI
Trigger: GATTCTTCTCCTCTGCCTTCAGAGAAGTCTGATGAA...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGATGGGAGGGCAGTGTTaGGGTCCCTGTAATAGTAAA +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRMGGQC*GPCNSK
Trigger: TTTACTATTACAGGGACCTCAACACTGCCCTCCCAT...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTAGAATGTGTGCCACATaGCTTAAAAACTTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVARMCAT*LKNFPL
Trigger: CAGCGGGAAGTTTTTAAGTCATGTGGCACACATTCT...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR GCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACCTCCTTGTGAAGGCTTaGATAACCATATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNLLVKA*ITIFSP
Trigger: GGGAGAGAATATGGTTATGCAAGCCTTCACAAGGAG...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACTTTGATGAGGTAGTCTaGACGGGTCTGCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNFDEVV*TGLQLF
Trigger: AAACAGTTGCAGACCCGTGCAGACTACCTCATCAAA...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTTTCAAAGCCTGCATTTaGGTCACCATCTGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAFKACI*VTICFN
Trigger: GTTGAAGCAGATGGTGACCCAAATGCAGGCTTTGAA...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGATCATCCGACTGGCTTaGTTCTCCACTACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRIIRLA*FSTTVS
Trigger: AGAAACAGTAGTGGAGAATCAAGCCAGTCGGATGAT...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAAGACTCAGACTCTGACTaGCTGCCTGATTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: GSKNAAENYRSPHILFLKDSDSD*LPDSDP
Trigger: CGGATCTGAATCAGGCAGTCAGTCAGAGTCTGAGTC...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTTTCGGTGGTTTTGCTTaGACTTTGTTTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAFGGFA*TLFSRE
Trigger: TTCCCGAGAAAACAAAGTTCAAGCAAAACCACCGAA...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACCCCTCAGCATTAAAATaGTCTAGAGCTTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNPSALK*SRACFL
Trigger: GAGGAAACAAGCTCTAGATCATTTTAATGCTGAGGG...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACAGAAGTTGGCAACCTTaGACTGGGAAAGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNRSWQP*TGKAIH
Trigger: ATGAATTGCTTTCCCAGTTCAAGGTTGCCAACTTCT...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGATTCACCTGTACTCCTaGTATTCGGAATGTTGGACC +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRIHLYS*YSECWT
Trigger: GGTCCAACATTCCGAATATCAGGAGTACAGGTGAAT...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGCTTCTTCATGGGAGATaGCTAGTTTGGCATTCACCT +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRLLHGR*LVWHSP
Trigger: AGGTGAATGCCAAACTAGTCATCTCCCATGAAGAAG...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp TGTAATATCTGCTGTCTTGCTTGTAGTGATCCCAATCACGATGGTCTTTACCATCCACTTGCCGTGATATaGACTGGAGCATCTGACACT +
Preference number: 4 (lower is better)
Translates to: CNICCLACSDPNHDGLYHPLAVI*TGASDT
Trigger: AGTGTCAGATGCTCCAGTTCATATCACGGCAAGTGG...ATGGTAAAGACCATCGTGATTGGGATCACTACAAGCAAGACAGCAGATATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505657.1
CDS-3UTR TCA 90 bp TGTAATATCTGCTGTCTTGCTTGTAGTGATCCCAATCACGATGGTCTTTACCATGTTCACCACTTGCCGTaGTATGAACTGGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: CNICCLACSDPNHDGLYHVHHLP*YELEHL
Trigger: CAGATGCTCCAGTTCATATCACGGCAAGTGGTGAAC...ATGGTAAAGACCATCGTGATTGGGATCACTACAAGCAAGACAGCAGATATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505657.1
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGGTCCATTTGCCAGTCTaGGTGATACCTATAATCCCT +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRVHLPV*VIPIIP
Trigger: AGGGATTATAGGTATCACTCAGACTGGCAAATGGAC...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACTTTAATAAGAAGGCCTaGGTTGGTAGGGAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNFNKKA*VGRERN
Trigger: GTTCCTTTCCCTACCAACTCAGGCCTTCTTATTAAA...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACAGACTCTGACTGACTaGCTGATTCAGATCCGGAGT +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKQTLTD*LIQIRS
Trigger: ACTCCGGATCTGAATCAGGCAGTCAGTCAGAGTCTG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACTGCTTCTTGAGGATTaGAGATCTCTGAACGGCCAG +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKLLLED*RSLNGQ
Trigger: CTGGCCGTTCAGAGATCTGCAATCCTCAAGAAGCAG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCCTGACCCAGACATTTaGCAATCTTCATCTTTATGC +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAPDPDI*QSSSLC
Trigger: GCATAAAGATGAAGATTGGCAAATGTCTGGGTCAGG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTGCTAACATTAACAGTTaGTTGGCGACGAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAANINS*LATRTS
Trigger: AGAAGTTCTCGTCGCCAAGCAACTGTTAATGTTAGC...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGCCTCTAACATTCTGCTaGTTGAGGGTTTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRPLTFC*LRVSSV
Trigger: GACAGAAGAAACCCTCAAGCAGCAGAATGTTAGAGG...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTTTGATGAGGTAGTCTaGACGGGTCTGCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRFDEVV*TGLQLF
Trigger: AAACAGTTGCAGACCCGTGCAGACTACCTCATCAAA...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp TCTCTCTGTCACTGTAATATCTGCTGTCTTGCTTGTAGTGATCCCAATCACGATAACTGGTTCACCACTTaGCGTGATATGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: SLCHCNICCLACSDPNHDNWFTT*RDMNWS
Trigger: GCTCCAGTTCATATCACGGCAAGTGGTGAACCAGTT...ATCGTGATTGGGATCACTACAAGCAAGACAGCAGATATTACAGTGACAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505657.1
CDS-3UTR CCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACCGAGGAATAGTCCGTaGTCTTCCACGTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKPRNSP*SSTFLW
Trigger: CCAAAGAAACGTGGAAGACCACGGACTATTCCTCGG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTGTTCAAATGGAGATCTaGAGCCATAAGGAGATCTCT +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAVQMEI*SHKEIS
Trigger: AGAGATCTCCTTATGGCTCCAGATCTCCATTTGAAC...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAAGGATTGCAGATCTCTaGACGGCCAGAATACTAGGA +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKRIADL*TARILG
Trigger: TCCTAGTATTCTGGCCGTTCAGAGATCTGCAATCCT...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTCTGAGATGGAGATCCTaGCCCAGACATTTGCCAATC +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVLRWRS*PRHLPI
Trigger: GATTGGCAAATGTCTGGGTCAGGATCTCCATCTCAG...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAACTGAGATGGAGATCCTaGCCCAGACATTTGCCAATC +
Preference number: 4 (lower is better)
Translates to: GSKNAAENYRSPHILFLKLRWRS*PRHLPI
Trigger: GATTGGCAAATGTCTGGGTCAGGATCTCCATCTCAG...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGCCTTTGCACCAAGAATaGGCAAGCCAATTTAAACCA +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRPLHQE*ASQFKP
Trigger: TGGTTTAAATTGGCTTGCTCATTCTTGGTGCAAAGG...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAAATGTTCAAAAAGCCTaGGGTACTGCCCTTGGAACC +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKNVQKA*GTALGT
Trigger: GGTTCCAAGGGCAGTACCTCAGGCTTTTTGAACATT...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGCCTGGTTCATTTTCATaGGTTTCAGCTCTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRPGSFS*VSALFK
Trigger: CTTGAAGAGAGCTGAAACTCATGAAAATGAACCAGG...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATGCTTTTCTCCTCTTTaGACTTCCCGCACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKCFSPL*TSRTRK
Trigger: CTTTCTGGTGCGGGAAGTTCAAAGAGGAGAAAAGCA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTGTTCACCACTTGCCGTaGTATGAACTGGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVVHHLP*YELEHL
Trigger: CAGATGCTCCAGTTCATATCACGGCAAGTGGTGAAC...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GTCACTGTAATATCTGCTGTCTTGCTTGTAGTGATCCCAATCACGATGGTCTTTGTCCATTTGCCAGTCTaGGTGATACCTATAATCCCT +
Preference number: 4 (lower is better)
Translates to: VTVISAVLLVVIPITMVFVHLPV*VIPIIP
Trigger: AGGGATTATAGGTATCACTCAGACTGGCAAATGGAC...AAAGACCATCGTGATTGGGATCACTACAAGCAAGACAGCAGATATTACAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTTCCTTCCTGAAACATaGTCACAGGTCAGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRFLPET*SQVRVK
Trigger: CTTTACTCTGACCTGTGATCATGTTTCAGGAAGGAA...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTGGCCGTTTTGGATTCTaGAAAGTGTTTATACACCTA +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAGRFGF*KVFIHL
Trigger: TAGGTGTATAAACACTTTTCAGAATCCAAAACGGCC...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTGTGGTGGTAAGTGCTTaGGGGAGTAAGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVVVVSA*GSKNAA
Trigger: TGCTGCATTCTTACTCCCTCAAGCACTTACCACCAC...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR GCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATACCTGACTGGCTACTaGTTCCATCACTACTGCTTC +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKYLTGY*FHHYCF
Trigger: GAAGCAGTAGTGATGGAAGCAGTAGCCAGTCAGGTA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAACAGACTCTGACTGACTaGCTGATTCAGATCCGGAGT +
Preference number: 4 (lower is better)
Translates to: GSKNAAENYRSPHILFLKQTLTD*LIQIRS
Trigger: ACTCCGGATCTGAATCAGGCAGTCAGTCAGAGTCTG...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR GCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTATTCCTCTAACATTCTaGTGCTTGAGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAIPLTF*CLRVSS
Trigger: AGAAGAAACCCTCAAGCAGCAGAATGTTAGAGGAAT...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTATGGGCTCTAGCCTGTaGCTGAAGATCATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVMGSSL*LKIILW
Trigger: CCACAGAATGATCTTCAGGCACAGGCTAGAGCCCAT...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAATCTCCTACTTCTACTaGGCCTCCCTTCACTTCCAT +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKISYFY*ASLHFH
Trigger: ATGGAAGTGAAGGGAGGCGCAGTAGAAGTAGGAGAT...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACGACTACTCCAGGTATaGTCCGGTGTACTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKRLLQV*SGVLLC
Trigger: ACACAAAAGTACACCGGAGCATACCTGGAGTAGTCG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACTGGGATAATAGACCTTaGATCCTGGAAAGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNWDNRP*ILERSN
Trigger: GTTACTTCTTTCCAGGATGCAAGGTCTATTATCCCA...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATCACTGCTACCTGACTaGCTACTGCTTCCATCACTA +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKSLLPD*LLLPSL
Trigger: TAGTGATGGAAGCAGTAGCCAGTCAGGTAGCAGTGA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCAAGTGTTGTGGATATaGGACCATCCTTTCCATTTA +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAQVLWI*DHPFHL
Trigger: TAAATGGAAAGGATGGTCCCATATCCACAACACTTG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTGCCTTTGTGTGGCATaGGATAGTATACTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRCLCVA*DSILLS
Trigger: AGAAAGCAGTATACTATCCCATGCCACACAAAGGCA...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACACACTGAAGATTTCTTaGATCTTTCCCTACCATCAG +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNTLKIS*IFPYHQ
Trigger: CTGATGGTAGGGAAAGATCCAAGAAATCTTCAGTGT...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
3UTR CAA 72 bp AATCCCTGGAAGATTTATGGTGCGTATATTCAGAACTaGACCGGTGGTCTGAATGTAACCGATGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: NPWKIYGAYIQN*TGGLNVTDDLS
Trigger: ACTCAGATCATCGGTTACATTCAGACCACCGGTCAAGTTCTGAATATACGCACCATAAATCTTCCAGGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR TCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAAGAGTCACTGCTACCTaGCTGGCTACTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIRVTAT*LATASI
Trigger: GATGGAAGCAGTAGCCAGTCAGGTAGCAGTGACTCT...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAGACTCAGACTCTGACTaGCTGCCTGATTCAGATCCG +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIDSDSD*LPDSDP
Trigger: CGGATCTGAATCAGGCAGTCAGTCAGAGTCTGAGTC...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACTATTAGATGAGGCTTaGTGTTGTTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKLLDEA*CCCCCC
Trigger: GCAGCAGCAACAACAACATCAAGCCTCATCTAATAG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTTATGCTTTTTCCTTTTaGCCTCACTTGATGAGTCAT +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAYAFSF*PHLMSH
Trigger: ATGACTCATCAAGTGAGGTCAAAAGGAAAAAGCATA...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAAGGATAACCAGCTGCTaGCTTTTGATTGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKRITSC*LLIGMS
Trigger: GCTCATTCCAATCAAAAGTCAGCAGCTGGTTATCCT...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAGAAACTTTTTGGAAATaGGAGCTCCATCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKETFWK*ELHLPS
Trigger: GCTGGGAAGATGGAGCTCTCATTTCCAAAAAGTTTC...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATTCATCAGACTTCTCTaGAGGCAGAGGAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKFIRLL*RQRRRI
Trigger: GATTCTTCTCCTCTGCCTTCAGAGAAGTCTGATGAA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACTTTCTTTACAAATGCTaGATGTCTTCTGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNFLYKC*MSSDPA
Trigger: AGCTGGATCAGAAGACATTCAGCATTTGTAAAGAAA...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCCAGCCACCATCTTATaGCTTAAGCATTATGAATTA +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAPATIL*LKHYEL
Trigger: TAATTCATAATGCTTAAGTCATAAGATGGTGGCTGG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR GCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACAACTTTCGGTGGTTTTaGTTGAACTTTGTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNNFRWF*LNFVFS
Trigger: CGAGAAAACAAAGTTCAAGCAAAACCACCGAAAGTT...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTAACTGGTTCACCACTTaGCGTGATATGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVNWFTT*RDMNWS
Trigger: GCTCCAGTTCATATCACGGCAAGTGGTGAACCAGTT...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTAAGTTGTTTCAAAGCTaGTTTAACAGGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAKLFQS*FNRPHS
Trigger: AGAATGAGGCCTGTTAAAGCAGCTTTGAAACAACTT...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp TGGAAGATTTATGGTGCGTATATTCAGAACTTGACCGGTGGTCTGAATGTAACCAGGAATAACTGTCCCTaGTGCTATCATCGTGATTTG +
Preference number: 4 (lower is better)
Translates to: WKIYGAYIQNLTGGLNVTRNNCP*CYHRDL
Trigger: CAAATCACGATGATAGCAGCAGGGACAGTTATTCCT...GGTTACATTCAGACCACCGGTCAAGTTCTGAATATACGCACCATAAATCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR GCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTTGTCACTGTAATATCTaGTGTCTTGCTTGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVACHCNI*CLACSD
Trigger: ATCACTACAAGCAAGACAGCAGATATTACAGTGACA...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACTGTCACTGTAATATCTaGTGTCTTGCTTGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNCHCNI*CLACSD
Trigger: ATCACTACAAGCAAGACAGCAGATATTACAGTGACA...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACCTGGAAGATTTATGGTaGGTATATTCAGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNLEDLW*VYSELD
Trigger: GTCAAGTTCTGAATATACGCACCATAAATCTTCCAG...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AATCTCCCTGATGTCGGTCTTTATGATGATCATGGTACTGAGTTAAGTGTCTATCGACTACTCCAGGTATaGTCCGGTGTACTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: NLPDVGLYDDHGTELSVYRLLQV*SGVLLC
Trigger: ACACAAAAGTACACCGGAGCATACCTGGAGTAGTCG...ATAGACACTTAACTCAGTACCATGATCATCATAAAGACCGACATCAGGGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR GCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTAGTTTCAAAAATGTGTaGCAGGACTACCTTCATTAC +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVASFKNV*QDYLHY
Trigger: GTAATGAAGGTAGTCCTGGCACACATTTTTGAAACT...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACAGTCACAGGTTTTCTaGGACTCTCCTTTGATTCAC +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKQSQVF*DSPLIH
Trigger: GTGAATCAAAGGAGAGTCCCAGAAAACCTGTGACTG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTTCCATCAACTTTCGGTaGTTTTGCTTGAACTTTGTT +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVASINFR*FCLNFV
Trigger: AACAAAGTTCAAGCAAAACCACCGAAAGTTGATGGA...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTGTCTCCCAAGTGTTGTaGATATGGGACCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVVSQVL*IWDHPF
Trigger: GAAAGGATGGTCCCATATCCACAACACTTGGGAGAC...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTCCTCCAATATAGGATaGCTGCTTCTTCAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVSSNIG*LLLQGY
Trigger: GTAGCCCTGAAGAAGCAGCCATCCTATATTGGAGGA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCTGCTTTCTTTCTTCTaGATCAGAAGGAATGGATTT +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVALLSFF*IRRNGF
Trigger: AAATCCATTCCTTCTGATCCAGAAGAAAGAAAGCAG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp ATTCAGAACTTGACCGGTGGTCTGAATGTAACCGATGATCTGAGTGAGAACGATACACTGAAGATTTCTTaGATCTTTCCCTACCATCAG +
Preference number: 4 (lower is better)
Translates to: IQNLTGGLNVTDDLSENDTLKIS*IFPYHQ
Trigger: CTGATGGTAGGGAAAGATCCAAGAAATCTTCAGTGT...ATCGTTCTCACTCAGATCATCGGTTACATTCAGACCACCGGTCAAGTTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505657.1
CDS-3UTR CCA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACGATACCTATAATCCCTaGAAGATTTATGGTGCGTAT +
Preference number: 4 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNDTYNP*KIYGAY
Trigger: ATACGCACCATAAATCTTCCAGGGATTATAGGTATC...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATACTGCTGGAAGCTCTGTaGTCCATTTGCCAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFILLEAL*SICQSE
Trigger: CTCAGACTGGCAAATGGACCACAGAGCTTCCAGCAG...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp TCTCTCTGTCACTGTAATATCTGCTGTCTTGCTTGTAGTGATCCCAATCACGATGTTCAAATGGAGATCTaGAGCCATAAGGAGATCTCT +
Preference number: 4 (lower is better)
Translates to: SLCHCNICCLACSDPNHDVQMEI*SHKEIS
Trigger: AGAGATCTCCTTATGGCTCCAGATCTCCATTTGAAC...ATCGTGATTGGGATCACTACAAGCAAGACAGCAGATATTACAGTGACAGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR TCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGAAAGCAAAAATCCTCTaGTCCCTCAGCATTAAAATG +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRKAKIL*SLSIKM
Trigger: CATTTTAATGCTGAGGGATCAGAGGATTTTTGCTTT...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTCTTCTTCATGGGAGATaGCTAGTTTGGCATTCACCT +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVLLHGR*LVWHSP
Trigger: AGGTGAATGCCAAACTAGTCATCTCCCATGAAGAAG...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATACCACTTGCCGTGATATaGACTGGAGCATCTGACACT +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIPLAVI*TGASDT
Trigger: AGTGTCAGATGCTCCAGTTCATATCACGGCAAGTGG...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GTCACTGTAATATCTGCTGTCTTGCTTGTAGTGATCCCAATCACGATGGTCTTTGGATTTCTAATCACGTaGGGATTCAAGTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VTVISAVLLVVIPITMVFGFLIT*GFKLLF
Trigger: AAACAGCAACTTGAATCCTCACGTGATTAGAAATCC...AAAGACCATCGTGATTGGGATCACTACAAGCAAGACAGCAGATATTACAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
CDS-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATTCCTTCCTGAAACATaGTCACAGGTCAGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKFLPET*SQVRVK
Trigger: CTTTACTCTGACCTGTGATCATGTTTCAGGAAGGAA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAATTTGGGTCACCATCTaGTTCAACTGCATAGATGGT +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKIWVTI*FNCIDG
Trigger: ACCATCTATGCAGTTGAAGCAGATGGTGACCCAAAT...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATGCAACTATTTCCTTTaGACCAAGAATGAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKCNYFL*TKNEQA
Trigger: GGCTTGCTCATTCTTGGTGCAAAGGAAATAGTTGCA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTCTCCTTGTGAAGGCTTaGATAACCATATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVLLVKA*ITIFSP
Trigger: GGGAGAGAATATGGTTATGCAAGCCTTCACAAGGAG...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAATGGGCTCTAGCCTGTaGCTGAAGATCATTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIMGSSL*LKIILW
Trigger: CCACAGAATGATCTTCAGGCACAGGCTAGAGCCCAT...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGCATGGGATAGTATACTaGTTTCTTTCTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRHGIVY*FLSSGS
Trigger: TGATCCAGAAGAAAGAAAGCAGTATACTATCCCATG...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTTGGAATCATCTTCTTTaGCCCAGTCTATATCAAAAT +
Preference number: 4 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAWNHLL*PSLYQN
Trigger: ATTTTGATATAGACTGGGGCAAAGAAGATGATTCCA...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp ATTCAGAACTTGACCGGTGGTCTGAATGTAACCGATGATCTGAGTGAGAACGATAAGTTGTTTCAAAGCTaGTTTAACAGGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: IQNLTGGLNVTDDLSENDKLFQS*FNRPHS
Trigger: AGAATGAGGCCTGTTAAAGCAGCTTTGAAACAACTT...ATCGTTCTCACTCAGATCATCGGTTACATTCAGACCACCGGTCAAGTTCTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505657.1
CDS-3UTR GCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAAGGAATAACTGTCCCTaGTGCTATCATCGTGATTTG +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKRNNCP*CYHRDL
Trigger: CAAATCACGATGATAGCAGCAGGGACAGTTATTCCT...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTCAGTCACAGGTTTTCTaGGACTCTCCTTTGATTCAC +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVQSQVF*DSPLIH
Trigger: GTGAATCAAAGGAGAGTCCCAGAAAACCTGTGACTG...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCATCAACTTTCGGTaGTTTTGCTTGAACTTTGTT +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRSINFR*FCLNFV
Trigger: AACAAAGTTCAAGCAAAACCACCGAAAGTTGATGGA...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATTGGCAACCTTGAACTaGGAAAGCAATTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKLATLN*ESNSSP
Trigger: AGGAGATGAATTGCTTTCCCAGTTCAAGGTTGCCAA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAGCTGTTGCTGCTTCTTaGGGATTGCAGATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIAVAAS*GLQISE
Trigger: TTCAGAGATCTGCAATCCTCAAGAAGCAGCAACAGC...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAACCTTTGCACCAAGAATaGGCAAGCCAATTTAAACCA +
Preference number: 4 (lower is better)
Translates to: GSKNAAENYRSPHILFLKPLHQE*ASQFKP
Trigger: TGGTTTAAATTGGCTTGCTCATTCTTGGTGCAAAGG...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTCCCTCAGCATTAAAATaGTCTAGAGCTTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVPSALK*SRACFL
Trigger: GAGGAAACAAGCTCTAGATCATTTTAATGCTGAGGG...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAAAGAAGTTGGCAACCTTaGACTGGGAAAGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: GSKNAAENYRSPHILFLKRSWQP*TGKAIH
Trigger: ATGAATTGCTTTCCCAGTTCAAGGTTGCCAACTTCT...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAACAGTCTATATCAAAATaGGCTGCCTTTGTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GSKNAAENYRSPHILFLKQSISK*AAFVWH
Trigger: ATGCCACACAAAGGCAGCTCATTTTGATATAGACTG...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAGGATTTCTAATCACGTaGGGATTCAAGTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKGFLIT*GFKLLF
Trigger: AAACAGCAACTTGAATCCTCACGTGATTAGAAATCC...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTCTTTCATTCCTTCCTaGAACATGATCACAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVSFIPS*NMITGQ
Trigger: CTGACCTGTGATCATGTTTCAGGAAGGAATGAAAGA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTTCACCTGTTTCTTTTaGCCAATTCGATGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVFTCFF*PIRWAL
Trigger: TAGAGCCCATCGAATTGGGCAAAAGAAACAGGTGAA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp TCTCTCTGTCACTGTAATATCTGCTGTCTTGCTTGTAGTGATCCCAATCACGATAATAACTGTCCCTGCTaGTATCATCGTGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: SLCHCNICCLACSDPNHDNNCPC*YHRDLY
Trigger: ATACAAATCACGATGATAGCAGCAGGGACAGTTATT...ATCGTGATTGGGATCACTACAAGCAAGACAGCAGATATTACAGTGACAGAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
CDS-3UTR GCA 90 bp GAGTTAAGTGTCTATCAGAGGAATAACTGTCCCTGCTGCTATCATCGTGATTTGTGTCACTGTAATATCTaGTGTCTTGCTTGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: ELSVYQRNNCPCCYHRDLCHCNI*CLACSD
Trigger: ATCACTACAAGCAAGACAGCAGATATTACAGTGACA...CAAATCACGATGATAGCAGCAGGGACAGTTATTCCTCTGATAGACACTTAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
CDS-3UTR GCA 90 bp GAAGATTTATGGTGCGTATATTCAGAACTTGACCGGTGGTCTGAATGTAACCGATGTCACTGTAATATCTaGTGTCTTGCTTGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: EDLWCVYSELDRWSECNRCHCNI*CLACSD
Trigger: ATCACTACAAGCAAGACAGCAGATATTACAGTGACA...TCGGTTACATTCAGACCACCGGTCAAGTTCTGAATATACGCACCATAAATCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR GCA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAACGACTACTCCAGGTATaGTCCGGTGTACTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: KYKASHNNICRKPKGANKRLLQV*SGVLLC
Trigger: ACACAAAAGTACACCGGAGCATACCTGGAGTAGTCG...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTGACCTCCAGCTCTTGTaGACAGCAAAAAGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVDLQLL*TAKSKN
Trigger: ATTTTTGCTTTTTGCTGTCCACAAGAGCTGGAGGTC...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAATTGGCAACCTTGAACTaGGAAAGCAATTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GSKNAAENYRSPHILFLKLATLN*ESNSSP
Trigger: AGGAGATGAATTGCTTTCCCAGTTCAAGGTTGCCAA...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CCA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGATTAATTCTTCTTCATaGGAGATGACTAGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRINSSS*EMTSLA
Trigger: TGCCAAACTAGTCATCTCCCATGAAGAAGAATTAAT...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTGCCTTTGTGTGGCATaGGATAGTATACTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVCLCVA*DSILLS
Trigger: AGAAAGCAGTATACTATCCCATGCCACACAAAGGCA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp TCTCTCTGTCACTGTAATATCTGCTGTCTTGCTTGTAGTGATCCCAATCACGATTCCCTGGAAGATTTATaGTGCGTATATTCAGAACTT +
Preference number: 4 (lower is better)
Translates to: SLCHCNICCLACSDPNHDSLEDL*CVYSEL
Trigger: AAGTTCTGAATATACGCACCATAAATCTTCCAGGGA...ATCGTGATTGGGATCACTACAAGCAAGACAGCAGATATTACAGTGACAGAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR TCA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAACTATTAGATGAGGCTTaGTGTTGTTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KYKASHNNICRKPKGANKLLDEA*CCCCCC
Trigger: GCAGCAGCAACAACAACATCAAGCCTCATCTAATAG...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATATGCTTTTTCCTTTTaGCCTCACTTGATGAGTCAT +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKYAFSF*PHLMSH
Trigger: ATGACTCATCAAGTGAGGTCAAAAGGAAAAAGCATA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAAGGATAACCAGCTGCTaGCTTTTGATTGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIRITSC*LLIGMS
Trigger: GCTCATTCCAATCAAAAGTCAGCAGCTGGTTATCCT...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAATGGCCTTTTCCCTTCTaGGATGGAATCACTATCAGA +
Preference number: 4 (lower is better)
Translates to: KYKASHNNICRKPKGANKWPFPF*DGITIR
Trigger: TCTGATAGTGATTCCATCTCAGAAGGGAAAAGGCCA...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAATTCACCTGTACTCCTaGTATTCGGAATGTTGGACC +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIIHLYS*YSECWT
Trigger: GGTCCAACATTCCGAATATCAGGAGTACAGGTGAAT...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATTTCTTTACAAATGCTaGATGTCTTCTGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKFLYKC*MSSDPA
Trigger: AGCTGGATCAGAAGACATTCAGCATTTGTAAAGAAA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAACCTCTAACATTCTGCTaGTTGAGGGTTTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: KYKASHNNICRKPKGANKPLTFC*LRVSSV
Trigger: GACAGAAGAAACCCTCAAGCAGCAGAATGTTAGAGG...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR GCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATCAAAATGAGCTaGCTTTGTGTGGCATGGGAT +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVYIKMS*LCVAWD
Trigger: ATCCCATGCCACACAAAGGCAGCTCATTTTGATATA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp GATCTGAGTGAGAACGATGATCAGAATGAGATCTATCTTTTAAACTTCCTTCCAAGGAATAACTGTCCCTaGTGCTATCATCGTGATTTG +
Preference number: 4 (lower is better)
Translates to: DLSENDDQNEIYLLNFLPRNNCP*CYHRDL
Trigger: CAAATCACGATGATAGCAGCAGGGACAGTTATTCCT...TGGAAGGAAGTTTAAAAGATAGATCTCATTCTGATCATCGTTCTCACTCAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
CDS-3UTR GCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACTGGAAGATTTATGGTaGGTATATTCAGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKLEDLW*VYSELD
Trigger: GTCAAGTTCTGAATATACGCACCATAAATCTTCCAG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAATTTTCCCTTCTGAGATaGAATCACTATCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: GSKNAAENYRSPHILFLKFSLLR*NHYQIQ
Trigger: CTGGATCTGATAGTGATTCCATCTCAGAAGGGAAAA...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACTGGATCAGAAGGAATaGATTTGTGCAAAGGTATTA +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKLDQKE*ICAKVL
Trigger: TAATACCTTTGCACAAATCCATTCCTTCTGATCCAG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACTGCTTTCTTTCTTCTaGATCAGAAGGAATGGATTT +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKLLSFF*IRRNGF
Trigger: AAATCCATTCCTTCTGATCCAGAAGAAAGAAAGCAG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACCCTACCATCAGACTTaGATTCACTCAATTTATCAT +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKPYHQT*IHSIYH
Trigger: ATGATAAATTGAGTGAATCCAAGTCTGATGGTAGGG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp GTAATATCTGCTGTCTTGCTTGTAGTGATCCCAATCACGATGGTCTTTACCATTGATACCTATAATCCCTaGAAGATTTATGGTGCGTAT +
Preference number: 4 (lower is better)
Translates to: VISAVLLVVIPITMVFTIDTYNP*KIYGAY
Trigger: ATACGCACCATAAATCTTCCAGGGATTATAGGTATC...AATGGTAAAGACCATCGTGATTGGGATCACTACAAGCAAGACAGCAGATATTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR CCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAGATACCTATAATCCCTaGAAGATTTATGGTGCGTAT +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKDTYNP*KIYGAY
Trigger: ATACGCACCATAAATCTTCCAGGGATTATAGGTATC...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATCTAAAATGTTAACCTaGCTGCATAGCACATTTGAC +
Preference number: 4 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKSKMLT*LHSTFD
Trigger: GTCAAATGTGCTATGCAGCCAGGTTAACATTTTAGA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAATTCGGTGGTTTTGCTTaGACTTTGTTTTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: KYKASHNNICRKPKGANKFGGFA*TLFSRE
Trigger: TTCCCGAGAAAACAAAGTTCAAGCAAAACCACCGAA...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATACCTGGTTCATTTTCATaGGTTTCAGCTCTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIPGSFS*VSALFK
Trigger: CTTGAAGAGAGCTGAAACTCATGAAAATGAACCAGG...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATACAGTCTATATCAAAATaGGCTGCCTTTGTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIQSISK*AAFVWH
Trigger: ATGCCACACAAAGGCAGCTCATTTTGATATAGACTG...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATCTTTCATTCCTTCCTaGAACATGATCACAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFISFIPS*NMITGQ
Trigger: CTGACCTGTGATCATGTTTCAGGAAGGAATGAAAGA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATTTAATAAGAAGGCCTaGGTTGGTAGGGAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIFNKKA*VGRERN
Trigger: GTTCCTTTCCCTACCAACTCAGGCCTTCTTATTAAA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTACTCAGCTAACTAGCTaGCTGAAACTTTCAACTAAA +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVTQLTS*LKLSTK
Trigger: TTTAGTTGAAAGTTTCAGTCAGCTAGTTAGCTGAGT...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR GCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATACCTGACCCAGACATTTaGCAATCTTCATCTTTATGC +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIPDPDI*QSSSLC
Trigger: GCATAAAGATGAAGATTGGCAAATGTCTGGGTCAGG...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAATTTGGGTCACCATCTaGTTCAACTGCATAGATGGT +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIIWVTI*FNCIDG
Trigger: ACCATCTATGCAGTTGAAGCAGATGGTGACCCAAAT...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATGCAACTATTTCCTTTaGACCAAGAATGAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFICNYFL*TKNEQA
Trigger: GGCTTGCTCATTCTTGGTGCAAAGGAAATAGTTGCA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTAAGTTGTTTCAAAGCTaGTTTAACAGGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVKLFQS*FNRPHS
Trigger: AGAATGAGGCCTGTTAAAGCAGCTTTGAAACAACTT...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTAATAACTGTCCCTGCTaGTATCATCGTGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVNNCPC*YHRDLY
Trigger: ATACAAATCACGATGATAGCAGCAGGGACAGTTATT...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAAGGAATAACTGTCCCTaGTGCTATCATCGTGATTTG +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIRNNCP*CYHRDL
Trigger: CAAATCACGATGATAGCAGCAGGGACAGTTATTCCT...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAAATATTCCACATCTTCTaGAGAGGCATTTTTCAACCA +
Preference number: 4 (lower is better)
Translates to: GSKNAAENYRSPHILFLKIFHIF*RGIFQP
Trigger: TGGTTGAAAAATGCCTCTCCAGAAGATGTGGAATAT...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTCTGGATCAGAAGGAATaGATTTGTGCAAAGGTATTA +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVLDQKE*ICAKVL
Trigger: TAATACCTTTGCACAAATCCATTCCTTCTGATCCAG...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTCCCTACCATCAGACTTaGATTCACTCAATTTATCAT +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVPYHQT*IHSIYH
Trigger: ATGATAAATTGAGTGAATCCAAGTCTGATGGTAGGG...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTCCCTGGAAGATTTATaGTGCGTATATTCAGAACTT +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVSLEDL*CVYSEL
Trigger: AAGTTCTGAATATACGCACCATAAATCTTCCAGGGA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAGTTCAAATGGAGATCTaGAGCCATAAGGAGATCTCT +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIVQMEI*SHKEIS
Trigger: AGAGATCTCCTTATGGCTCCAGATCTCCATTTGAAC...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTCTAAAATGTTAACCTaGCTGCATAGCACATTTGAC +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVSKMLT*LHSTFD
Trigger: GTCAAATGTGCTATGCAGCCAGGTTAACATTTTAGA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR TCA 90 bp GATGATCTGAGTGAGAACGATGATCAGAATGAGATCTATCTTTTAAACTTCCTTGGATTTCTAATCACGTaGGGATTCAAGTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: DDLSENDDQNEIYLLNFLGFLIT*GFKLLF
Trigger: AAACAGCAACTTGAATCCTCACGTGATTAGAAATCC...AAGGAAGTTTAAAAGATAGATCTCATTCTGATCATCGTTCTCACTCAGATCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
CDS-3UTR TCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAGGATTTCTAATCACGTaGGGATTCAAGTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIGFLIT*GFKLLF
Trigger: AAACAGCAACTTGAATCCTCACGTGATTAGAAATCC...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAATTCCTCTAACATTCTaGTGCTTGAGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIIPLTF*CLRVSS
Trigger: AGAAGAAACCCTCAAGCAGCAGAATGTTAGAGGAAT...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATTTCATCAGCGAGTATaGAACTATTTCCTTTGCACC +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIFHQRV*NYFLCT
Trigger: GGTGCAAAGGAAATAGTTGCATACTCGCTGATGAAA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAATTTCATCAGCGAGTATaGAACTATTTCCTTTGCACC +
Preference number: 4 (lower is better)
Translates to: KYKASHNNICRKPKGANKFHQRV*NYFLCT
Trigger: GGTGCAAAGGAAATAGTTGCATACTCGCTGATGAAA...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR GCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATATATCAAAATGAGCTaGCTTTGTGTGGCATGGGAT +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIYIKMS*LCVAWD
Trigger: ATCCCATGCCACACAAAGGCAGCTCATTTTGATATA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp GATCTGAGTGAGAACGATGATCAGAATGAGATCTATCTTTTAAACTTCCTTCCAAATAACTGTCCCTGCTaGTATCATCGTGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: DLSENDDQNEIYLLNFLPNNCPC*YHRDLY
Trigger: ATACAAATCACGATGATAGCAGCAGGGACAGTTATT...TGGAAGGAAGTTTAAAAGATAGATCTCATTCTGATCATCGTTCTCACTCAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
CDS-3UTR GCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATGGGATAATAGACCTTaGATCCTGGAAAGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIWDNRP*ILERSN
Trigger: GTTACTTCTTTCCAGGATGCAAGGTCTATTATCCCA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATACAAGTGTTGTGGATATaGGACCATCCTTTCCATTTA +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIQVLWI*DHPFHL
Trigger: TAAATGGAAAGGATGGTCCCATATCCACAACACTTG...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTCTGCTGACTTTTGATTaGAATGAGCAATTATACGTT +
Preference number: 4 (lower is better)
Translates to: RPCILERSNNTATDRRSVLLTFD*NEQLYV
Trigger: AACGTATAATTGCTCATTCCAATCAAAAGTCAGCAG...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATTTTCCCTTCTGAGATaGAATCACTATCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIFSLLR*NHYQIQ
Trigger: CTGGATCTGATAGTGATTCCATCTCAGAAGGGAAAA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAAACACTGAAGATTTCTTaGATCTTTCCCTACCATCAG +
Preference number: 4 (lower is better)
Translates to: KYKASHNNICRKPKGANKTLKIS*IFPYHQ
Trigger: CTGATGGTAGGGAAAGATCCAAGAAATCTTCAGTGT...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAAAAAGCAAAAATCCTCTaGTCCCTCAGCATTAAAATG +
Preference number: 4 (lower is better)
Translates to: KYKASHNNICRKPKGANKKAKIL*SLSIKM
Trigger: CATTTTAATGCTGAGGGATCAGAGGATTTTTGCTTT...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR TCA 90 bp AATGTAACCGATGATCTGAGTGAGAACGATGATCAGAATGAGATCTATCTTTTATTTCTTTACAAATGCTaGATGTCTTCTGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: NVTDDLSENDDQNEIYLLFLYKC*MSSDPA
Trigger: AGCTGGATCAGAAGACATTCAGCATTTGTAAAGAAA...TAAAAGATAGATCTCATTCTGATCATCGTTCTCACTCAGATCATCGGTTACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505657.1
CDS-3UTR GCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATACATGGGATAGTATACTaGTTTCTTTCTTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIHGIVY*FLSSGS
Trigger: TGATCCAGAAGAAAGAAAGCAGTATACTATCCCATG...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAAATAACTGTCCCTGCTaGTATCATCGTGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFINNCPC*YHRDLY
Trigger: ATACAAATCACGATGATAGCAGCAGGGACAGTTATT...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AATGTAACCGATGATCTGAGTGAGAACGATGATCAGAATGAGATCTATCTTTTACTGGAAGATTTATGGTaGGTATATTCAGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: NVTDDLSENDDQNEIYLLLEDLW*VYSELD
Trigger: GTCAAGTTCTGAATATACGCACCATAAATCTTCCAG...TAAAAGATAGATCTCATTCTGATCATCGTTCTCACTCAGATCATCGGTTACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR CCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAATATTCCACATCTTCTaGAGAGGCATTTTTCAACCA +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIIFHIF*RGIFQP
Trigger: TGGTTGAAAAATGCCTCTCCAGAAGATGTGGAATAT...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAGGAGTGGTTTTTGATTaGTTCCTGCTAAAATACTCA +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIGVVFD*FLLKYS
Trigger: TGAGTATTTTAGCAGGAACCAATCAAAAACCACTCC...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR GCA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAATGGAATCATCTTCTTTaGCCCAGTCTATATCAAAAT +
Preference number: 4 (lower is better)
Translates to: KYKASHNNICRKPKGANKWNHLL*PSLYQN
Trigger: ATTTTGATATAGACTGGGGCAAAGAAGATGATTCCA...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATACTGCTGACTTTTGATTaGAATGAGCAATTATACGTT +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFILLTFD*NEQLYV
Trigger: AACGTATAATTGCTCATTCCAATCAAAAGTCAGCAG...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAATTAATTCTTCTTCATaGGAGATGACTAGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIINSSS*EMTSLA
Trigger: TGCCAAACTAGTCATCTCCCATGAAGAAGAATTAAT...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CCA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATATTTTCTCTTCTGTTaGGATAATAGACCTTGCATC +
Preference number: 4 (lower is better)
Translates to: LASWKEVTILLLIEDLFIYFLFC*DNRPCI
Trigger: GATGCAAGGTCTATTATCCCAACAGAAGAGAAAATA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAAGATTCACCGGCGGGCTaGGCGGGGCGGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKDSPAG*AGRREP
Trigger: CGGCTCCCTCCGCCCCGCCAAGCCCGCCGGTGAATC...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS GCA 90 bp AGTCAGAGTCACTGCTACCTGACTGGCTACTGCTTCCATCACTACTaGTTCCAGAACTCGAACCAGATCCAGAGCCTGAAGCTGACCCAG +
Preference number: 5 (lower is better)
Translates to: SQSHCYLTGYCFHHY*FQNSNQIQSLKLTQ
Trigger: CTGGGTCAGCTTCAGGCTCTGGATCTGGTTCGAGTTCTGGAAGCAGTAGTGATGGAAGCAGTAGCCAGTCAGGTAGCAGTGACTCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS GCA 90 bp CTGATTCAGATCCGGAGTCAGAGTCACTGCTACCTGACTGGCTACTaGTTCCATCACTACTGCTTCCAGAACTCGAACCAGATCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LIQIRSQSHCYLTGY*FHHYCFQNSNQIQS
Trigger: GCTCTGGATCTGGTTCGAGTTCTGGAAGCAGTAGTGATGGAAGCAGTAGCCAGTCAGGTAGCAGTGACTCTGACTCCGGATCTGAATCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS GCA 90 bp GAACTTTGTTTTCTCGGGAAGTGTCTGACTCAGACTCTGACTGACTaGCTGATTCAGATCCGGAGTCAGAGTCACTGCTACCTGACTGGC +
Preference number: 5 (lower is better)
Translates to: ELCFLGKCLTQTLTD*LIQIRSQSHCYLTG
Trigger: GCCAGTCAGGTAGCAGTGACTCTGACTCCGGATCTGAATCAGGCAGTCAGTCAGAGTCTGAGTCAGACACTTCCCGAGAAAACAAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCCTGAGGTACTGCCCTaGGAACCTTTGCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAPEVLP*EPLLRA
Trigger: AGCCCTCAGCAAAGGTTCCAAGGGCAGTACCTCAGG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACCCTGAGGTACTGCCCTaGGAACCTTTGCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNPEVLP*EPLLRA
Trigger: AGCCCTCAGCAAAGGTTCCAAGGGCAGTACCTCAGG...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 90 bp TGTTGCTGCTGCTGCTGTTGCTGCTTCTTGAGGATTGCAGATCTCTaGACGGCCAGAATACTAGGACTAGATTTCCAAAACTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCFLRIADL*TARILGLDFQNSAP
Trigger: TGGAGCTGAGTTTTGGAAATCTAGTCCTAGTATTCTGGCCGTTCAGAGATCTGCAATCCTCAAGAAGCAGCAACAGCAGCAGCAGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 90 bp TCACTGCTAGAGGAATCCTCTTCTGATCCGCTATTAGATGAGGCTTaGTGTTGTTGTTGCTGCTGCTGCTGTTGCTGCTTCTTGAGGATT +
Preference number: 5 (lower is better)
Translates to: SLLEESSSDPLLDEA*CCCCCCCCCCFLRI
Trigger: AATCCTCAAGAAGCAGCAACAGCAGCAGCAGCAACAACAACATCAAGCCTCATCTAATAGCGGATCAGAAGAGGATTCCTCTAGCAGTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCATCATCCGACTGGCTaGATTCTCCACTACTGTTTC +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAHHPTG*ILHYCF
Trigger: GAAACAGTAGTGGAGAATCAAGCCAGTCGGATGATG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCTAGACCTCCAGCTCTaGTGGACAGCAAAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVALDLQL*WTAKSK
Trigger: TTTGCTTTTTGCTGTCCACAAGAGCTGGAGGTCTAG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTGTCTTCCACGTTTCTTaGGCCTTTTCCCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAVFHVS*AFSLLR
Trigger: TCTCAGAAGGGAAAAGGCCAAAGAAACGTGGAAGAC...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTATAAGAAGGCCTGAGTaGGTAGGGAAAGGAACAGTC +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAIRRPE*VGKGTV
Trigger: GACTGTTCCTTTCCCTACCAACTCAGGCCTTCTTAT...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAATTCTGGGACTCTCCTTaGATTCACCGGCGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKFWDSP*IHRRAW
Trigger: CCAAGCCCGCCGGTGAATCAAAGGAGAGTCCCAGAA...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGCATCATCCGACTGGCTaGATTCTCCACTACTGTTTC +
Preference number: 5 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRHHPTG*ILHYCF
Trigger: GAAACAGTAGTGGAGAATCAAGCCAGTCGGATGATG...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACTTTCAAAGCCTGCATTaGGGTCACCATCTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNFQSLH*GHHLLQ
Trigger: TTGAAGCAGATGGTGACCCAAATGCAGGCTTTGAAA...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTTTTCAAAGCCTGCATTaGGGTCACCATCTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAFQSLH*GHHLLQ
Trigger: TTGAAGCAGATGGTGACCCAAATGCAGGCTTTGAAA...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGCTAACATTCTGCTGCTaGAGGGTTTCTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRLTFCC*RVSSVS
Trigger: GGAGACAGAAGAAACCCTCAAGCAGCAGAATGTTAG...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTAGTCTGAATTTCCCTTaGCCAGGAAGTAAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVASLNFP*PGSKSG
Trigger: TCCACTCTTACTTCCTGGCAAAGGGAAATTCAGACT...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTGGGAGATGACTAGTTaGGCATTCACCTGTACTCCT +
Preference number: 5 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRWEMTS*AFTCTP
Trigger: AGGAGTACAGGTGAATGCCAAACTAGTCATCTCCCA...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTGTTTTGATCACTGTTTaGCTGAGACTCCTGCCGTTT +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAVLITV*LRLLPF
Trigger: AAACGGCAGGAGTCTCAGCAAAACAGTGATCAAAAC...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 90 bp AGGAATAGTCCGTGGTCTTCCACGTTTCTTTGGCCTTTTCCCTTCTaGGATGGAATCACTATCAGATCCAGAGTATCTCCTACTTCTACT +
Preference number: 5 (lower is better)
Translates to: RNSPWSSTFLWPFPF*DGITIRSRVSPTST
Trigger: AGTAGAAGTAGGAGATACTCTGGATCTGATAGTGATTCCATCTCAGAAGGGAAAAGGCCAAAGAAACGTGGAAGACCACGGACTATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAATTGCTGCTGCTGCTGTaGCTGCTTCTTGAGGATTGC +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKLLLLL*LLLEDC
Trigger: GCAATCCTCAAGAAGCAGCAACAGCAGCAGCAGCAA...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTAAAATAAGAACTCGATaGCCTCGTTCTCTTAGGCGA +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAKIRTR*PRSLRR
Trigger: TCGCCTAAGAGAACGAGGCAATCGAGTTCTTATTTT...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCTCAGGCCTATCAAGTaGTTTCAAAGCTGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVALRPIK*FQSCFN
Trigger: GTTAAAGCAGCTTTGAAACAACTTGATAGGCCTGAG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTAACTTCCTTCCAAATTaGACCTGTGATCTCTACTCC +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVANFLPN*TCDLYS
Trigger: GGAGTAGAGATCACAGGTCAAATTTGGAAGGAAGTT...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 90 bp TCAGATTCTTCAGAAATGGGAACTGGTTCACCACTTGCCGTGATATaGACTGGAGCATCTGACACTGAAGATTTCTTGGATCTTTCCCTA +
Preference number: 5 (lower is better)
Translates to: SDSSEMGTGSPLAVI*TGASDTEDFLDLSL
Trigger: TAGGGAAAGATCCAAGAAATCTTCAGTGTCAGATGCTCCAGTTCATATCACGGCAAGTGGTGAACCAGTTCCCATTTCTGAAGAATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284049.7
ENST00000505657.1
ENST00000511067.2
ENST00000514344.5
ENST00000614616.5
CDS TCA 90 bp GCTCTTCAGATTCTTCAGAAATGGGAACTGGTTCACCACTTGCCGTaGTATGAACTGGAGCATCTGACACTGAAGATTTCTTGGATCTTT +
Preference number: 5 (lower is better)
Translates to: ALQILQKWELVHHLP*YELEHLTLKISWIF
Trigger: AAAGATCCAAGAAATCTTCAGTGTCAGATGCTCCAGTTCATATCACGGCAAGTGGTGAACCAGTTCCCATTTCTGAAGAATCTGAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284049.7
ENST00000505657.1
ENST00000511067.2
ENST00000514344.5
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTCAACTTTCGGTGGTTTaGCTTGAACTTTGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVAQLSVV*LELCFL
Trigger: GAGAAAACAAAGTTCAAGCAAAACCACCGAAAGTTG...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GCTTGTGATGAAAAGCGGCAAGGTGGTCGCAGTGTACAATGTAAACAAGTAGCTAACATTAACAGTTGCTaGGCGACGAGAACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: ACDEKRQGGRSVQCKQVANINSC*ATRTSF
Trigger: AAAAGAAGTTCTCGTCGCCAAGCAACTGTTAATGTT...AGCTACTTGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACTAGACCTCCAGCTCTaGTGGACAGCAAAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKLDLQL*WTAKSK
Trigger: TTTGCTTTTTGCTGTCCACAAGAGCTGGAGGTCTAG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACCTCCCTTCACTTCCATaGAAACTAATCTGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNLPSLP*KLICFA
Trigger: TGCAAAACAGATTAGTTTCAATGGAAGTGAAGGGAG...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAGTCTTCCACGTTTCTTaGGCCTTTTCCCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKVFHVS*AFSLLR
Trigger: TCTCAGAAGGGAAAAGGCCAAAGAAACGTGGAAGAC...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ATCACTGACTTAAAAACAGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGGACACTGAAGATTTCTaGGATCTTTCCCTACCATCA +
Preference number: 5 (lower is better)
Translates to: ITDLKTVLSSLYGRAVLRDTEDF*DLSLPS
Trigger: TGATGGTAGGGAAAGATCCAAGAAATCTTCAGTGTC...CCTCAACACTGCCCTCCCATACAGGCTGGATAAAACTGTTTTTAAGTCAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GGTACTGAGTTAAGTGTCTATCAGAGGAATAACTGTCCCTGCTGCTATCATCGTGTAATATCTGCTGTCTaGCTTGTAGTGATCCCAATC +
Preference number: 5 (lower is better)
Translates to: GTELSVYQRNNCPCCYHRVISAV*LVVIPI
Trigger: GATTGGGATCACTACAAGCAAGACAGCAGATATTAC...ACGATGATAGCAGCAGGGACAGTTATTCCTCTGATAGACACTTAACTCAGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
CDS-3UTR CAA 90 bp GAGTTAAGTGTCTATCAGAGGAATAACTGTCCCTGCTGCTATCATCGTGATTTGGCGTATATTCAGAACTaGACCGGTGGTCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: ELSVYQRNNCPCCYHRDLAYIQN*TGGLNV
Trigger: TACATTCAGACCACCGGTCAAGTTCTGAATATACGC...CAAATCACGATGATAGCAGCAGGGACAGTTATTCCTCTGATAGACACTTAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR CAA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATTGCTGCTGCTGCTGTaGCTGCTTCTTGAGGATTGC +
Preference number: 5 (lower is better)
Translates to: LASWKEVTILLLIEDLFILLLLL*LLLEDC
Trigger: GCAATCCTCAAGAAGCAGCAACAGCAGCAGCAGCAA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTCTAACATTCTGCTGCTaGAGGGTTTCTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVLTFCC*RVSSVS
Trigger: GGAGACAGAAGAAACCCTCAAGCAGCAGAATGTTAG...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACCTCATCAATGCATGCTaGAAACTTTTTGGAAATGAG +
Preference number: 5 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNLINAC*KLFGNE
Trigger: CTCATTTCCAAAAAGTTTCAAGCATGCATTGATGAG...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAATTCACCTGTTTCTTTaGCCCAATTCGATGGGCTCT +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKIHLFL*PNSMGS
Trigger: AGAGCCCATCGAATTGGGCAAAAGAAACAGGTGAAT...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAGAGAAGTTGGCAACCTaGAACTGGGAAAGCAATTCA +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKEKLAT*NWESNS
Trigger: TGAATTGCTTTCCCAGTTCAAGGTTGCCAACTTCTC...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACTTTCCTCCCAATTCTTaGAATTTCTTTCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNFPPNS*NFFQVP
Trigger: TGGAACCTGAAAGAAATTCAAAGAATTGGGAGGAAA...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACAGCATCTCGAGCAATaGCATCTAATCTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKQHLEQ*HLIFPE
Trigger: CTCTGGAAAGATTAGATGCAATTGCTCGAGATGCTG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GAGTTAAGTGTCTATCAGAGGAATAACTGTCCCTGCTGCTATCATCGTGATTTGCTCAGGCCTATCAAGTaGTTTCAAAGCTGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: ELSVYQRNNCPCCYHRDLLRPIK*FQSCFN
Trigger: GTTAAAGCAGCTTTGAAACAACTTGATAGGCCTGAG...CAAATCACGATGATAGCAGCAGGGACAGTTATTCCTCTGATAGACACTTAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505657.1
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAGTTTTGATCACTGTTTaGCTGAGACTCCTGCCGTTT +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKVLITV*LRLLPF
Trigger: AAACGGCAGGAGTCTCAGCAAAACAGTGATCAAAAC...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGTTTTATCCAGCCTGTATGGGAGGGCAGTGTTGAGGTCCCTGTAATAGTAAACATTCAAGTTGCTGTTTaGATCACTGTTTTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: SFIQPVWEGSVEVPVIVNIQVAV*ITVLLR
Trigger: TCTCAGCAAAACAGTGATCAAAACAGCAACTTGAAT...GTTTACTATTACAGGGACCTCAACACTGCCCTCCCATACAGGCTGGATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GAGTTAAGTGTCTATCAGAGGAATAACTGTCCCTGCTGCTATCATCGTGATTTGGTAATATCTGCTGTCTaGCTTGTAGTGATCCCAATC +
Preference number: 5 (lower is better)
Translates to: ELSVYQRNNCPCCYHRDLVISAV*LVVIPI
Trigger: GATTGGGATCACTACAAGCAAGACAGCAGATATTAC...CAAATCACGATGATAGCAGCAGGGACAGTTATTCCTCTGATAGACACTTAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
CDS CCA 90 bp GGATCAGAAGGAATGGATTTGTGCAAAGGTATTAATTCTTCTTCATaGGAGATGACTAGTTTGGCATTCACCTGTACTCCTGATATTCGG +
Preference number: 5 (lower is better)
Translates to: GSEGMDLCKGINSSS*EMTSLAFTCTPDIR
Trigger: CCGAATATCAGGAGTACAGGTGAATGCCAAACTAGTCATCTCCCATGAAGAAGAATTAATACCTTTGCACAAATCCATTCCTTCTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284049.7
ENST00000514344.5
ENST00000614616.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTGAGAAGTTGGCAACCTaGAACTGGGAAAGCAATTCA +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVEKLAT*NWESNS
Trigger: TGAATTGCTTTCCCAGTTCAAGGTTGCCAACTTCTC...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATCCATATTTGAGAAGTaGGCAACCTTGAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKSIFEK*ATLNWE
Trigger: TTCCCAGTTCAAGGTTGCCAACTTCTCAAATATGGA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAACTGATATTCGGAATGTaGGACCCTTCACTTTTCCGA +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKLIFGM*DPSLFR
Trigger: TCGGAAAAGTGAAGGGTCCAACATTCCGAATATCAG...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATCATCTGGAAGAATCTaGTGTGTTAGACTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKSSGRI*CVRLRS
Trigger: TGACCTCAGTCTAACACACAAGATTCTTCCAGATGA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTTGCTTTTCTCCTCTTaGAACTTCCCGCACCAGAAA +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVLLFSS*NFPHQK
Trigger: TTTCTGGTGCGGGAAGTTCAAAGAGGAGAAAAGCAA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAATTGCTTTTCTCCTCTTaGAACTTCCCGCACCAGAAA +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKLLFSS*NFPHQK
Trigger: TTTCTGGTGCGGGAAGTTCAAAGAGGAGAAAAGCAA...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAGTAATATCTGCTGTCTaGCTTGTAGTGATCCCAATC +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKVISAV*LVVIPI
Trigger: GATTGGGATCACTACAAGCAAGACAGCAGATATTAC...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AAGAATCTCCCTGATGTCGGTCTTTATGATGATCATGGTACTGAGTTAAGTGTCAACTTCCTTCCAAATTaGACCTGTGATCTCTACTCC +
Preference number: 5 (lower is better)
Translates to: KNLPDVGLYDDHGTELSVNFLPN*TCDLYS
Trigger: GGAGTAGAGATCACAGGTCAAATTTGGAAGGAAGTT...GACACTTAACTCAGTACCATGATCATCATAAAGACCGACATCAGGGAGATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505657.1
ENST00000512844.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTGCGTATATTCAGAACTaGACCGGTGGTCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVAYIQN*TGGLNV
Trigger: TACATTCAGACCACCGGTCAAGTTCTGAATATACGC...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAAGCGTATATTCAGAACTaGACCGGTGGTCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKAYIQN*TGGLNV
Trigger: TACATTCAGACCACCGGTCAAGTTCTGAATATACGC...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS TCA 90 bp ATTAACAAATTGGAATCATCTTCTTTGCCCCAGTCTATATCAAAATaGGCTGCCTTTGTGTGGCATGGGATAGTATACCTGGCATCAAAG +
Preference number: 5 (lower is better)
Translates to: INKLESSSLPQSISK*AAFVWHGIVYLASK
Trigger: CTTTGATGCCAGGTATACTATCCCATGCCACACAAAGGCAGCTCATTTTGATATAGACTGGGGCAAAGAAGATGATTCCAATTTGTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514344.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTTTCGGTGGTTTTGCTaGAACTTTGTTTTCTCGGGA +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVFRWFC*NFVFSG
Trigger: TCCCGAGAAAACAAAGTTCAAGCAAAACCACCGAAA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAATGAGATCGTCTGTATaGTTTTTCCAAGGCCCATTT +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKMRSSV*FFQGPF
Trigger: AAATGGGCCTTGGAAAAACAATACAGACGATCTCAT...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTAACCACAGCATTCATTaGAGAAGCCCAAGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVNHSIH*RSPSLN
Trigger: ATTCAGACTTGGGCTTCTCAAATGAATGCTGTGGTT...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTAAAATAAGAACTCGATaGCCTCGTTCTCTTAGGCGA +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVKIRTR*PRSLRR
Trigger: TCGCCTAAGAGAACGAGGCAATCGAGTTCTTATTTT...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAAGTACTGTCTTCCCAGTaGTGTCCATTCTTTGAATTA +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKVLSSQ*CPFFEL
Trigger: TAATTCAAAGAATGGACACAACTGGGAAGACAGTAC...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAATCCATATTTGAGAAGTaGGCAACCTTGAACTGGGAA +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKSIFEK*ATLNWE
Trigger: TTCCCAGTTCAAGGTTGCCAACTTCTCAAATATGGA...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAATCATCTGGAAGAATCTaGTGTGTTAGACTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKSSGRI*CVRLRS
Trigger: TGACCTCAGTCTAACACACAAGATTCTTCCAGATGA...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAATCCCTACCATCAGACTaGGATTCACTCAATTTATCA +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKSLPSD*DSLNLS
Trigger: TGATAAATTGAGTGAATCCAAGTCTGATGGTAGGGA...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAAGACACTGAAGATTTCTaGGATCTTTCCCTACCATCA +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKDTEDF*DLSLPS
Trigger: TGATGGTAGGGAAAGATCCAAGAAATCTTCAGTGTC...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAACTCAGGCCTATCAAGTaGTTTCAAAGCTGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKLRPIK*FQSCFN
Trigger: GTTAAAGCAGCTTTGAAACAACTTGATAGGCCTGAG...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp GATCTGAGTGAGAACGATGATCAGAATGAGATCTATCTTTTAAACTTCCTTCCAGTTTTGATCACTGTTTaGCTGAGACTCCTGCCGTTT +
Preference number: 5 (lower is better)
Translates to: DLSENDDQNEIYLLNFLPVLITV*LRLLPF
Trigger: AAACGGCAGGAGTCTCAGCAAAACAGTGATCAAAAC...TGGAAGGAAGTTTAAAAGATAGATCTCATTCTGATCATCGTTCTCACTCAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTGTAATATCTGCTGTCTaGCTTGTAGTGATCCCAATC +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVVISAV*LVVIPI
Trigger: GATTGGGATCACTACAAGCAAGACAGCAGATATTAC...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTAACTTCCTTCCAAATTaGACCTGTGATCTCTACTCC +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVNFLPN*TCDLYS
Trigger: GGAGTAGAGATCACAGGTCAAATTTGGAAGGAAGTT...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTGCTCCGGTGTACTTTaGTGTTCAACTGAATGTTCA +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVCSGVL*CSTECS
Trigger: TGAACATTCAGTTGAACACAAAAGTACACCGGAGCA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 90 bp AAGGAATGGATTTGTGCAAAGGTATTAATTCTTCTTCATGGGAGATaGCTAGTTTGGCATTCACCTGTACTCCTGATATTCGGAATGTTG +
Preference number: 5 (lower is better)
Translates to: KEWICAKVLILLHGR*LVWHSPVLLIFGML
Trigger: CAACATTCCGAATATCAGGAGTACAGGTGAATGCCAAACTAGTCATCTCCCATGAAGAAGAATTAATACCTTTGCACAAATCCATTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284049.7
ENST00000514344.5
ENST00000614616.5
CDS GCA 90 bp ATCACTCACTGCTTTCTTTCTTCTGGATCAGAAGGAATGGATTTGTaGAAAGGTATTAATTCTTCTTCATGGGAGATGACTAGTTTGGCA +
Preference number: 5 (lower is better)
Translates to: ITHCFLSSGSEGMDL*KGINSSSWEMTSLA
Trigger: TGCCAAACTAGTCATCTCCCATGAAGAAGAATTAATACCTTTGCACAAATCCATTCCTTCTGATCCAGAAGAAAGAAAGCAGTGAGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514344.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTCAACTTTCGGTGGTTTaGCTTGAACTTTGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVQLSVV*LELCFL
Trigger: GAGAAAACAAAGTTCAAGCAAAACCACCGAAAGTTG...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTAACATTAACAGTTGCTaGGCGACGAGAACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVNINSC*ATRTSF
Trigger: AAAAGAAGTTCTCGTCGCCAAGCAACTGTTAATGTT...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp ACCTGGCTGCATAGCACATTTGACATTATTGCCCACATAAAACGGGAAAACAAACTCATCAATGCATGCTaGAAACTTTTTGGAAATGAG +
Preference number: 5 (lower is better)
Translates to: TWLHSTFDIIAHIKRENKLINAC*KLFGNE
Trigger: CTCATTTCCAAAAAGTTTCAAGCATGCATTGATGAG...TTTGTTTTCCCGTTTTATGTGGGCAATAATGTCAAATGTGCTATGCAGCCAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAATCAGGGCTACAAACCTaGGCCTTTGTTTTAATACTT +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKSGLQT*AFVLIL
Trigger: AAGTATTAAAACAAAGGCCAAGGTTTGTAGCCCTGA...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAAAGTCTGAATTTCCCTTaGCCAGGAAGTAAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: KYKASHNNICRKPKGANKSLNFP*PGSKSG
Trigger: TCCACTCTTACTTCCTGGCAAAGGGAAATTCAGACT...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTGTACTGTCTTCCCAGTaGTGTCCATTCTTTGAATTA +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVVLSSQ*CPFFEL
Trigger: TAATTCAAAGAATGGACACAACTGGGAAGACAGTAC...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTCTCCCTTCACTTCCATaGAAACTAATCTGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVLPSLP*KLICFA
Trigger: TGCAAAACAGATTAGTTTCAATGGAAGTGAAGGGAG...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATACAGCATCTCGAGCAATaGCATCTAATCTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LASWKEVTILLLIEDLFIQHLEQ*HLIFPE
Trigger: CTCTGGAAAGATTAGATGCAATTGCTCGAGATGCTG...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATACTGATATTCGGAATGTaGGACCCTTCACTTTTCCGA +
Preference number: 5 (lower is better)
Translates to: LASWKEVTILLLIEDLFILIFGM*DPSLFR
Trigger: TCGGAAAAGTGAAGGGTCCAACATTCCGAATATCAG...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GTAACCGATGATCTGAGTGAGAACGATGATCAGAATGAGATCTATCTTTTAAACTGCTCCGGTGTACTTTaGTGTTCAACTGAATGTTCA +
Preference number: 5 (lower is better)
Translates to: VTDDLSENDDQNEIYLLNCSGVL*CSTECS
Trigger: TGAACATTCAGTTGAACACAAAAGTACACCGGAGCA...GTTTAAAAGATAGATCTCATTCTGATCATCGTTCTCACTCAGATCATCGGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS TCA 90 bp ATTAACAAATTGGAATCATCTTCTTTGCCCCAGTCTATATCAAAATaGGCTGCCTTTGTGTGGCATGGGATAGTATACTGCTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: INKLESSSLPQSISK*AAFVWHGIVYCFLS
Trigger: AGAAAGAAAGCAGTATACTATCCCATGCCACACAAAGGCAGCTCATTTTGATATAGACTGGGGCAAAGAAGATGATTCCAATTTGTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GGGAGTAAGAATGCAGCAGAAAATTACAGGAGCCCACATATCCTTTTTCTTAAATTATGCTTTTTCCTTTaGACCTCACTTGATGAGTCA +
Preference number: 5 (lower is better)
Translates to: GSKNAAENYRSPHILFLKLCFFL*TSLDES
Trigger: TGACTCATCAAGTGAGGTCAAAAGGAAAAAGCATAA...TTTAAGAAAAAGGATATGTGGGCTCCTGTAATTTTCTGCTGCATTCTTACTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATAAACCACAGCATTCATTaGAGAAGCCCAAGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: LASWKEVTILLLIEDLFINHSIH*RSPSLN
Trigger: ATTCAGACTTGGGCTTCTCAAATGAATGCTGTGGTT...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AGACCTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTTTCCTCCCAATTCTTaGAATTTCTTTCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: RPCILERSNNTATDRRSVFPPNS*NFFQVP
Trigger: TGGAACCTGAAAGAAATTCAAAGAATTGGGAGGAAA...AACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp GATGATCTGAGTGAGAACGATGATCAGAATGAGATCTATCTTTTAAACTTCCTTGACACTGAAGATTTCTaGGATCTTTCCCTACCATCA +
Preference number: 5 (lower is better)
Translates to: DDLSENDDQNEIYLLNFLDTEDF*DLSLPS
Trigger: TGATGGTAGGGAAAGATCCAAGAAATCTTCAGTGTC...AAGGAAGTTTAAAAGATAGATCTCATTCTGATCATCGTTCTCACTCAGATCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505657.1
CDS-3UTR CAA 90 bp AATCTCCCTGATGTCGGTCTTTATGATGATCATGGTACTGAGTTAAGTGTCTATATTCAAGTTGCTGTTTaGATCACTGTTTTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: NLPDVGLYDDHGTELSVYIQVAV*ITVLLR
Trigger: TCTCAGCAAAACAGTGATCAAAACAGCAACTTGAAT...ATAGACACTTAACTCAGTACCATGATCATCATAAAGACCGACATCAGGGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512844.5
CDS-3UTR CAA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATGCTCCGGTGTACTTTaGTGTTCAACTGAATGTTCA +
Preference number: 5 (lower is better)
Translates to: LASWKEVTILLLIEDLFICSGVL*CSTECS
Trigger: TGAACATTCAGTTGAACACAAAAGTACACCGGAGCA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 90 bp AGACTTGGATTCACTCAATTTATCATCATCTTCATCAGACTTCTCTaGAGGCAGAGGAGAAGAATCACTCTTTATTTCCTCTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: RLGFTQFIIIFIRLL*RQRRRITLYFLFHF
Trigger: AAAGTGAAAGAGGAAATAAAGAGTGATTCTTCTCCTCTGCCTTCAGAGAAGTCTGATGAAGATGATGATAAATTGAGTGAATCCAAGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284049.7
ENST00000514344.5
ENST00000614616.5
CDS-3UTR CAA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATCAGGGCTACAAACCTaGGCCTTTGTTTTAATACTT +
Preference number: 5 (lower is better)
Translates to: LASWKEVTILLLIEDLFISGLQT*AFVLIL
Trigger: AAGTATTAAAACAAAGGCCAAGGTTTGTAGCCCTGA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS-3UTR CAA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAATCCCTACCATCAGACTaGGATTCACTCAATTTATCA +
Preference number: 5 (lower is better)
Translates to: KYKASHNNICRKPKGANKSLPSD*DSLNLS
Trigger: TGATAAATTGAGTGAATCCAAGTCTGATGGTAGGGA...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp AAATATAAAGCATCCCATAATAATATCTGTAGGAAGCCAAAAGGGGCCAACAAAACAAATATCTGTAGGTaGCTCCCACAGCTAATTAAC +
Preference number: 5 (lower is better)
Translates to: KYKASHNNICRKPKGANKTNICR*LPQLIN
Trigger: GTTAATTAGCTGTGGGAGCAACCTACAGATATTTGT...TTTGTTGGCCCCTTTTGGCTTCCTACAGATATTATTATGGGATGCTTTATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS-3UTR CAA 90 bp CTTGCATCCTGGAAAGAAGTAACAATACTGCTACTGATAGAAGATCTGTTTATATTATGCTTTTTCCTTTaGACCTCACTTGATGAGTCA +
Preference number: 5 (lower is better)
Translates to: LASWKEVTILLLIEDLFILCFFL*TSLDES
Trigger: TGACTCATCAAGTGAGGTCAAAAGGAAAAAGCATAA...TATAAACAGATCTTCTATCAGTAGCAGTATTGTTACTTCTTTCCAGGATGCAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 72 bp GCGATCCCCTGCGGAGTGGAGCTAACAATTCATTATTaGAGCACCAAGGGCGAGGGCAGCAAGAGCTATAAG +
Preference number: 6 (lower is better)
Translates to: AIPCGVELTIHY*STKGEGSKSYK
Trigger: CTTATAGCTCTTGCTGCCCTCGCCCTTGGTGCTTCAATAATGAATTGTTAGCTCCACTCCGCAGGGGATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614616.5
CDS GCA 72 bp TTTCTCGGGAAGTGTCTGACTCAGACTCTGACTGACTaGCTGATTCAGATCCGGAGTCAGAGTCACTGCTAC +
Preference number: 6 (lower is better)
Translates to: FLGKCLTQTLTD*LIQIRSQSHCY
Trigger: GTAGCAGTGACTCTGACTCCGGATCTGAATCAGGCAGTCAGTCAGAGTCTGAGTCAGACACTTCCCGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS CCA 72 bp GATTCAGATCCGGAGTCAGAGTCACTGCTACCTGACTaGCTACTGCTTCCATCACTACTGCTTCCAGAACTC +
Preference number: 6 (lower is better)
Translates to: DSDPESESLLPD*LLLPSLLLPEL
Trigger: GAGTTCTGGAAGCAGTAGTGATGGAAGCAGTAGCCAGTCAGGTAGCAGTGACTCTGACTCCGGATCTGAATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS GCA 72 bp TTGTTGCTGCTGCTGCTGTTGCTGCTTCTTGAGGATTaGAGATCTCTGAACGGCCAGAATACTAGGACTAGA +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLED*RSLNGQNTRTR
Trigger: TCTAGTCCTAGTATTCTGGCCGTTCAGAGATCTGCAATCCTCAAGAAGCAGCAACAGCAGCAGCAGCAACAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 72 bp CCGTGGTCTTCCACGTTTCTTTGGCCTTTTCCCTTCTaGGATGGAATCACTATCAGATCCAGAGTATCTCCT +
Preference number: 6 (lower is better)
Translates to: PWSSTFLWPFPF*DGITIRSRVSP
Trigger: AGGAGATACTCTGGATCTGATAGTGATTCCATCTCAGAAGGGAAAAGGCCAAAGAAACGTGGAAGACCACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS CCA 72 bp CCAGAGCCTGAAGCTGACCCAGAATCATCATCCGACTaGCTTGATTCTCCACTACTGTTTCTAACACTTTCT +
Preference number: 6 (lower is better)
Translates to: PEPEADPESSSD*LDSPLLFLTLS
Trigger: AGAAAGTGTTAGAAACAGTAGTGGAGAATCAAGCCAGTCGGATGATGATTCTGGGTCAGCTTCAGGCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS CAA 72 bp GTTTGGCATTCACCTGTACTCCTGATATTCGGAATGTaGGACCCTTCACTTTTCCGAGTCTACCACCTGTTC +
Preference number: 6 (lower is better)
Translates to: VWHSPVLLIFGM*DPSLFRVYHLF
Trigger: GAACAGGTGGTAGACTCGGAAAAGTGAAGGGTCCAACATTCCGAATATCAGGAGTACAGGTGAATGCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 72 bp TGCTGCTGTTGCTGCTTCTTGAGGATTGCAGATCTCTaGACGGCCAGAATACTAGGACTAGATTTCCAAAAC +
Preference number: 6 (lower is better)
Translates to: CCCCCFLRIADL*TARILGLDFQN
Trigger: GTTTTGGAAATCTAGTCCTAGTATTCTGGCCGTTCAGAGATCTGCAATCCTCAAGAAGCAGCAACAGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 72 bp TCTCTCTCTTCTTCAGATTCTGAATCTGAACCAGACTaGGATGGAGATCCTGACCCAGACATTTGCCAATCT +
Preference number: 6 (lower is better)
Translates to: SLSSSDSESEPD*DGDPDPDICQS
Trigger: AGATTGGCAAATGTCTGGGTCAGGATCTCCATCTCAGTCTGGTTCAGATTCAGAATCTGAAGAAGAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 72 bp TCAGAAATGGGAACTGGTTCACCACTTGCCGTGATATaGACTGGAGCATCTGACACTGAAGATTTCTTGGAT +
Preference number: 6 (lower is better)
Translates to: SEMGTGSPLAVI*TGASDTEDFLD
Trigger: ATCCAAGAAATCTTCAGTGTCAGATGCTCCAGTTCATATCACGGCAAGTGGTGAACCAGTTCCCATTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284049.7
ENST00000505657.1
ENST00000511067.2
ENST00000514344.5
ENST00000614616.5
CDS GCA 72 bp ATCATCTTCTTTGCCCCAGTCTATATCAAAATGAGCTaGCTTTGTGTGGCATGGGATAGTATACCTGGCATC +
Preference number: 6 (lower is better)
Translates to: IIFFAPVYIKMS*LCVAWDSIPGI
Trigger: GATGCCAGGTATACTATCCCATGCCACACAAAGGCAGCTCATTTTGATATAGACTGGGGCAAAGAAGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514344.5
CDS TCA 72 bp TTGGAATCATCTTCTTTGCCCCAGTCTATATCAAAATaGGCTGCCTTTGTGTGGCATGGGATAGTATACTGC +
Preference number: 6 (lower is better)
Translates to: LESSSLPQSISK*AAFVWHGIVYC
Trigger: GCAGTATACTATCCCATGCCACACAAAGGCAGCTCATTTTGATATAGACTGGGGCAAAGAAGATGATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 72 bp ATTCTTCAGAAATGGGAACTGGTTCACCACTTGCCGTaGTATGAACTGGAGCATCTGACACTGAAGATTTCT +
Preference number: 6 (lower is better)
Translates to: ILQKWELVHHLP*YELEHLTLKIS
Trigger: AGAAATCTTCAGTGTCAGATGCTCCAGTTCATATCACGGCAAGTGGTGAACCAGTTCCCATTTCTGAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284049.7
ENST00000505657.1
ENST00000511067.2
ENST00000514344.5
ENST00000614616.5
CDS TCA 72 bp TTGGAATCATCTTCTTTGCCCCAGTCTATATCAAAATaGGCTGCCTTTGTGTGGCATGGGATAGTATACCTG +
Preference number: 6 (lower is better)
Translates to: LESSSLPQSISK*AAFVWHGIVYL
Trigger: CAGGTATACTATCCCATGCCACACAAAGGCAGCTCATTTTGATATAGACTGGGGCAAAGAAGATGATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514344.5
CDS GCA 72 bp ATCATCTTCTTTGCCCCAGTCTATATCAAAATGAGCTaGCTTTGTGTGGCATGGGATAGTATACTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: IIFFAPVYIKMS*LCVAWDSILLS
Trigger: AGAAAGCAGTATACTATCCCATGCCACACAAAGGCAGCTCATTTTGATATAGACTGGGGCAAAGAAGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS CAA 72 bp ATTTCCAAAACTCAGCTCCATCAACTTTCGGTGGTTTaGCTTGAACTTTGTTTTCTCGGGAAGTGTCTGACT +
Preference number: 6 (lower is better)
Translates to: ISKTQLHQLSVV*LELCFLGKCLT
Trigger: AGTCAGACACTTCCCGAGAAAACAAAGTTCAAGCAAAACCACCGAAAGTTGATGGAGCTGAGTTTTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS CAA 90 bp GATTTGTGCAAAGGTATTAATTCTTCTTCATGGGAGATGACTAGTTaGGCATTCACCTGTACTCCTGATATTCGGAATGTTGGACCCTTC +
Preference number: 6 (lower is better)
Translates to: DLCKGINSSSWEMTS*AFTCTPDIRNVGPF
Trigger: GAAGGGTCCAACATTCCGAATATCAGGAGTACAGGTGAATGCCAAACTAGTCATCTCCCATGAAGAAGAATTAATACCTTTGCACAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284049.7
ENST00000514344.5
ENST00000614616.5
CDS CCA 72 bp GGAATGGATTTGTGCAAAGGTATTAATTCTTCTTCATaGGAGATGACTAGTTTGGCATTCACCTGTACTCCT +
Preference number: 6 (lower is better)
Translates to: GMDLCKGINSSS*EMTSLAFTCTP
Trigger: AGGAGTACAGGTGAATGCCAAACTAGTCATCTCCCATGAAGAAGAATTAATACCTTTGCACAAATCCATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284049.7
ENST00000514344.5
ENST00000614616.5
CDS CAA 72 bp ACTCGATTGCCTCGTTCTCTTAGGCGAATTAATAGCTaGTCAAGAAGAATCAATTTTCCGCTACTACGAATT +
Preference number: 6 (lower is better)
Translates to: TRLPRSLRRINS*SRRINFPLLRI
Trigger: AATTCGTAGTAGCGGAAAATTGATTCTTCTTGACAAGCTATTAATTCGCCTAAGAGAACGAGGCAATCGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 72 bp TCATCTCCTACAGTTAAAGGACCTGGTTCATTTTCATaGGTTTCAGCTCTCTTCAAGATTTCATCTATATCC +
Preference number: 6 (lower is better)
Translates to: SSPTVKGPGSFS*VSALFKISSIS
Trigger: GGATATAGATGAAATCTTGAAGAGAGCTGAAACTCATGAAAATGAACCAGGTCCTTTAACTGTAGGAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS TCA 72 bp ATTTGTGCAAAGGTATTAATTCTTCTTCATGGGAGATaGCTAGTTTGGCATTCACCTGTACTCCTGATATTC +
Preference number: 6 (lower is better)
Translates to: ICAKVLILLHGR*LVWHSPVLLIF
Trigger: GAATATCAGGAGTACAGGTGAATGCCAAACTAGTCATCTCCCATGAAGAAGAATTAATACCTTTGCACAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284049.7
ENST00000514344.5
ENST00000614616.5
CDS CAA 72 bp AAAGGTATTAATTCTTCTTCATGGGAGATGACTAGTTaGGCATTCACCTGTACTCCTGATATTCGGAATGTT +
Preference number: 6 (lower is better)
Translates to: KGINSSSWEMTS*AFTCTPDIRNV
Trigger: AACATTCCGAATATCAGGAGTACAGGTGAATGCCAAACTAGTCATCTCCCATGAAGAAGAATTAATACCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284049.7
ENST00000514344.5
ENST00000614616.5
CDS CAA 90 bp AAAATAAGAACTCGATTGCCTCGTTCTCTTAGGCGAATTAATAGCTaGTCAAGAAGAATCAATTTTCCGCTACTACGAATTAAGTGTTGT +
Preference number: 6 (lower is better)
Translates to: KIRTRLPRSLRRINS*SRRINFPLLRIKCC
Trigger: ACAACACTTAATTCGTAGTAGCGGAAAATTGATTCTTCTTGACAAGCTATTAATTCGCCTAAGAGAACGAGGCAATCGAGTTCTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS GCA 72 bp CATTTCTTCATCCTCCTTATAGCTAACATTAACAGTTaGTTGGCGACGAGAACTTCTTTTATCATTATCATA +
Preference number: 6 (lower is better)
Translates to: HFFILLIANINS*LATRTSFIIII
Trigger: TATGATAATGATAAAAGAAGTTCTCGTCGCCAAGCAACTGTTAATGTTAGCTATAAGGAGGATGAAGAAATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5
CDS CAA 72 bp TTCTTCATCCTCCTTATAGCTAACATTAACAGTTGCTaGGCGACGAGAACTTCTTTTATCATTATCATAATC +
Preference number: 6 (lower is better)
Translates to: FFILLIANINSC*ATRTSFIIIII
Trigger: GATTATGATAATGATAAAAGAAGTTCTCGTCGCCAAGCAACTGTTAATGTTAGCTATAAGGAGGATGAAGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284049.7
ENST00000614616.5