RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHCHD7 (Homo sapiens)

Ensembl gene IDs: ENSG00000170791

Ensembl transcript IDs: ENST00000303759.3, ENST00000355315.8, ENST00000396723.9, ENST00000517636.5, ENST00000517933.5, ENST00000518169.1, ENST00000518801.5, ENST00000519367.1, ENST00000521524.5, ENST00000521831.5, ENST00000521982.5, ENST00000522166.1, ENST00000523061.5, ENST00000523532.5, ENST00000523667.5, ENST00000523975.5

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGCAATCTACAGGATACTCTCTGAATGTGGTTCCAGCTTCTCTTaGCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGAAACATT +
Preference number: 1 (lower is better)
Translates to: GAIYRILSECGSSFS*LTLLLITFPFLGNI
Trigger: AATGTTTCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACCACATTCAGAGAGTATCCTGTAGATTGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR GCA 90 bp TTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGAAACATTaGCTTCATCTCAGCCCCATTCAGTCTTTACTTGTTCACATCATA +
Preference number: 1 (lower is better)
Translates to: LPHTLAHNISFPWKH*LHLSPIQSLLVHII
Trigger: TATGATGTGAACAAGTAAAGACTGAATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR CCA 90 bp TTCAGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTaGAAAAGCTCAATTTCTCATGTAGCCTTACCTAACTCCATGCCT +
Preference number: 1 (lower is better)
Translates to: FSLYLFTSYSSFKTQ*KSSISHVALPNSMP
Trigger: AGGCATGGAGTTAGGTAAGGCTACATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp CATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACA +
Preference number: 2 (lower is better)
Translates to: HRHGTESKQKGHGVTSLSPSAWH*EQAKRT
Trigger: TGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGG...AGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp CATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTAAAAAGGACACGGGGTaGCTTCACTGTCTCCACTTG +
Preference number: 2 (lower is better)
Translates to: HRHGTESKQKGHGVTSLSKKDTG*LHCLHL
Trigger: CAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTT...AGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp AGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGCCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACA +
Preference number: 2 (lower is better)
Translates to: SQQQHTIGMALRASKKDTPSAWH*EQAKRT
Trigger: TGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGG...CGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp CCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCAACCCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACA +
Preference number: 2 (lower is better)
Translates to: PNSMPPESHANSCHNTANPSAWH*EQAKRT
Trigger: TGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGG...GTTGGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp GCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCAGTCACCACATTGAATGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 2 (lower is better)
Translates to: AVGIRRAASQSTPVTTLNASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...ATTCAATGTGGTGACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp CCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 2 (lower is better)
Translates to: PTATYHRHGTESKQKGHGASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...CCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR CCA 90 bp CCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGAACTTAAGGTCTGTCTaGGTGAGGGGTGTACAGTCT +
Preference number: 2 (lower is better)
Translates to: PTATYHRHGTESKQKGHGNLRSV*VRGVQS
Trigger: AGACTGTACACCCCTCACCCAGACAGACCTTAAGTT...CCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp CAAACGATTCTAAAAGGCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 2 (lower is better)
Translates to: QTILKGSGHKEGCFTVYPSHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...GGGGTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGCCTTTTAGAATCGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp GGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCACTTGAAAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 2 (lower is better)
Translates to: GTESKQKGHGVTSLSPLESHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...TTCAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR CCA 90 bp CAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACAACTTAAGGTCTGTCTaGGTGAGGGGTGTACAGTCT +
Preference number: 2 (lower is better)
Translates to: QPTATYHRHGTESKQKGHNLRSV*VRGVQS
Trigger: AGACTGTACACCCCTCACCCAGACAGACCTTAAGTT...GTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR CCA 90 bp CAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGGTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: QQQHTIGMALRASKKDTGCRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...CCCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
3UTR-3UTR TCA 90 bp TTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCAAAAAGGACACGGGGTaGCTTCACTGTCTCCACTTG +
Preference number: 2 (lower is better)
Translates to: LPNSMPPESHANSCHNTAKKDTG*LHCLHL
Trigger: CAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTT...GGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp TCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCAACAGCAACGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 2 (lower is better)
Translates to: SMPPESHANSCHNTANSNASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...GTTGCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp CAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 2 (lower is better)
Translates to: QHSQQQHTIGMALRASKKASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...CTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp GGATCTGAGGCCCACCACACATTCCTTACCTTCAACTTACCTTTCCAGTCTTCTGGTTCCAGCTTCTCTTaGCTCACACTCTTGCTCATA +
Preference number: 2 (lower is better)
Translates to: GSEAHHTFLTFNLPFQSSGSSFS*LTLLLI
Trigger: TATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACC...AGAAGACTGGAAAGGTAAGTTGAAGGTAAGGAATGTGTGGTGGGCCTCAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp GCCATTAAAACAATGTTCTTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCGGGCATAAGGAGGGCTaGTTCACAGTCTACCCCAGT +
Preference number: 2 (lower is better)
Translates to: AIKTMFLTQDQMKRRDKSGHKEG*FTVYPS
Trigger: ACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCC...GCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAAGAACATTGTTTTAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp GGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCACTTGAATTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 2 (lower is better)
Translates to: GTESKQKGHGVTSLSPLEFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...TTCAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
3UTR-3UTR TCA 90 bp TCTCCACTTGAAGAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATAAAAAGGACACGGGGTaGCTTCACTGTCTCCACTTG +
Preference number: 2 (lower is better)
Translates to: SPLEELKVCLGEGCTVLNKKDTG*LHCLHL
Trigger: CAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTT...ATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTCTTCAAGTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp TTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGAAACCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACA +
Preference number: 2 (lower is better)
Translates to: FQLLLPHTLAHNISFPWKPSAWH*EQAKRT
Trigger: TGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGG...TTTCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp TTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCAATGTTTTCAAGTACACAAATGAGCCTGGGATCTaGGGCCCACCACACATTCCT +
Preference number: 2 (lower is better)
Translates to: LTQDQMKRRDKSNVFKYTNEPGI*GPPHIP
Trigger: AGGAATGTGTGGTGGGCCTCAGATCCCAGGCTCATT...TGTGTACTTGAAAACATTGCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp TCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 2 (lower is better)
Translates to: SHVALPNSMPPESHANSCSHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...GCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp TCGGCAGCCATTAAAACAATGTTCTTGACCCAAGACCAGATGAAGAGAAGGGACAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 2 (lower is better)
Translates to: SAAIKTMFLTQDQMKRRDSHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...GTCCCTTCTCTTCATCTGGTCTTGGGTCAAGAACATTGTTTTAATGGCTGCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp AACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCAACAGCTTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 2 (lower is better)
Translates to: NSMPPESHANSCHNTANSFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
3UTR-3UTR CCA 90 bp CCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: PYLTPCLQKVMQTHATTQCRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...CTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
3UTR-3UTR CCA 90 bp CTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCAAGGATGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: LHSYSLEDDEAANKSSQGCRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...TCCTTGAGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
3UTR-3UTR GCA 90 bp AAACCTGAGCTTGGTTTTAGACTCAGACAGACAGTTCATTGTCGGCAGCCATTAGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 2 (lower is better)
Translates to: KPELGFRLRQTVHCRQPLASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...TAATGGCTGCCGACAATGAACTGTCTGTCTGAGTCTAAAACCAAGCTCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CCA 90 bp TCTCCACTTGAAGAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATAACTTAAGGTCTGTCTaGGTGAGGGGTGTACAGTCT +
Preference number: 2 (lower is better)
Translates to: SPLEELKVCLGEGCTVLNNLRSV*VRGVQS
Trigger: AGACTGTACACCCCTCACCCAGACAGACCTTAAGTT...ATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTCTTCAAGTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp GGGAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACA +
Preference number: 2 (lower is better)
Translates to: GNPFVFLPITVVQKLILQPSAWH*EQAKRT
Trigger: TGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGG...CTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp TTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGAAACTACAGGATACTCTCTaGATGTGGTTCCAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: FQLLLPHTLAHNISFPWKLQDTL*MWFQLL
Trigger: GAGAAGCTGGAACCACATTCAGAGAGTATCCTGTAG...TTTCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp GCCATTAAAACAATGTTCTTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCCTACAGGATACTCTCTaGATGTGGTTCCAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: AIKTMFLTQDQMKRRDKSLQDTL*MWFQLL
Trigger: GAGAAGCTGGAACCACATTCAGAGAGTATCCTGTAG...GCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAAGAACATTGTTTTAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp GAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCTAATGAGCCTGGGATCTaGGGCCCACCACACATTCCT +
Preference number: 2 (lower is better)
Translates to: ESICLSSHYCGSKTDTTANEPGI*GPPHIP
Trigger: AGGAATGTGTGGTGGGCCTCAGATCCCAGGCTCATT...AGCTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CCA 90 bp GAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCAACTTAAGGTCTGTCTaGGTGAGGGGTGTACAGTCT +
Preference number: 2 (lower is better)
Translates to: ELKVCLGEGCTVLNITAINLRSV*VRGVQS
Trigger: AGACTGTACACCCCTCACCCAGACAGACCTTAAGTT...GATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR CCA 90 bp AAAACCCAGTGGAAAAGCTCAATTTCTCATGTAGCCTTACCTAACTCCATGCCTAACTTAAGGTCTGTCTaGGTGAGGGGTGTACAGTCT +
Preference number: 2 (lower is better)
Translates to: KTQWKSSISHVALPNSMPNLRSV*VRGVQS
Trigger: AGACTGTACACCCCTCACCCAGACAGACCTTAAGTT...AGGCATGGAGTTAGGTAAGGCTACATGAGAAATTGAGCTTTTCCACTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR CCA 90 bp AGCCTGGGATCTGAGGCCCACCACACATTCCTTACCTTCAACTTACCTTTCCAGTCTTTCAAAACCCAGTaGAAAAGCTCAATTTCTCAT +
Preference number: 2 (lower is better)
Translates to: SLGSEAHHTFLTFNLPFQSFKTQ*KSSISH
Trigger: ATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGA...CTGGAAAGGTAAGTTGAAGGTAAGGAATGTGTGGTGGGCCTCAGATCCCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR CAA 90 bp AGGATACTCTCTGAATGTGGTTCCAGCTTCTCTTGCCTCACACTCTaGCTCATAACATTTCCTTTCCTTGGAAACATTGCCTTCATCTCA +
Preference number: 2 (lower is better)
Translates to: RILSECGSSFSCLTL*LITFPFLGNIAFIS
Trigger: TGAGATGAAGGCAATGTTTCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACCACATTCAGAGAGTATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp GGGAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGAAAAAGGACACGGGGTaGCTTCACTGTCTCCACTTG +
Preference number: 2 (lower is better)
Translates to: GNPFVFLPITVVQKLILQKKDTG*LHCLHL
Trigger: CAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTT...CTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR TCA 90 bp AGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCACCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACA +
Preference number: 2 (lower is better)
Translates to: SLYLFTSYSSFKTQWKSSPSAWH*EQAKRT
Trigger: TGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGG...TGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp TTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCAATGTTTTCAAGTACACAGGTTCCAGCTTCTCTTaGCTCACACTCTTGCTCATA +
Preference number: 2 (lower is better)
Translates to: LTQDQMKRRDKSNVFKYTGSSFS*LTLLLI
Trigger: TATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACC...TGTGTACTTGAAAACATTGCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp GTTGATATTGGTATGTACCTTCAAAGGAGTGACATTAAAATTCCAAGCCCTTTAGGGCATAAGGAGGGCTaGTTCACAGTCTACCCCAGT +
Preference number: 2 (lower is better)
Translates to: VDIGMYLQRSDIKIPSPLGHKEG*FTVYPS
Trigger: ACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCC...TAAAGGGCTTGGAATTTTAATGTCACTCCTTTGAAGGTACATACCAATATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355315.8
ENST00000523975.5
3UTR-3UTR CCA 90 bp GAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: ELKVCLGEGCTVLNITAICRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...GATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
3UTR-3UTR CCA 90 bp AAAGACATTGTTTTAGGGCTGCAGATACTTAAATGTCTAAGAAGACCCACCTATCCCTACAGCCATCAGTaGGAAAGGATTGTGGGTACT +
Preference number: 2 (lower is better)
Translates to: KDIVLGLQILKCLRRPTYPYSHQ*ERIVGT
Trigger: AGTACCCACAATCCTTTCCCACTGATGGCTGTAGGG...ATAGGTGGGTCTTCTTAGACATTTAAGTATCTGCAGCCCTAAAACAATGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517933.5
3UTR-3UTR TCA 90 bp ATTCAGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGAAAAAGGACACGGGGTaGCTTCACTGTCTCCACTTG +
Preference number: 2 (lower is better)
Translates to: IQSLLVHIILFFQNPVEKKKDTG*LHCLHL
Trigger: CAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTT...CTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp GAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCTAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 2 (lower is better)
Translates to: ESICLSSHYCGSKTDTTASHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...AGCTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR GCA 90 bp AATGTTGATATTGGTATGTACCTTCAAAGGAGTGACATTAAAATTCCAAGCCCTGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 2 (lower is better)
Translates to: NVDIGMYLQRSDIKIPSPASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...AGGGCTTGGAATTTTAATGTCACTCCTTTGAAGGTACATACCAATATCAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355315.8
ENST00000523975.5
3UTR-3UTR TCA 90 bp GGGCTGCAGATACTTAAATGTCTAAGAAGACCCACCTATATTAAAACTGCATTCAAGGATTGTGGGTACTaGCTAATTTTAGGCTTCAGT +
Preference number: 2 (lower is better)
Translates to: GLQILKCLRRPTYIKTAFKDCGY*LILGFS
Trigger: ACTGAAGCCTAAAATTAGTCAGTACCCACAATCCTT...GAATGCAGTTTTAATATAGGTGGGTCTTCTTAGACATTTAAGTATCTGCAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517933.5
3UTR-3UTR CCA 90 bp ATTCAGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGTCTTTCAAAACCCAGTaGAAAAGCTCAATTTCTCAT +
Preference number: 2 (lower is better)
Translates to: IQSLLVHIILFFQNPVEKSFKTQ*KSSISH
Trigger: ATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGA...CTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACTGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp CTAAAAGGCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCAGTCACCACAGTCTCATCCCAGTGTaGAGTTCACCTGATGAACCC +
Preference number: 3 (lower is better)
Translates to: LKGSGHKEGCFTVYPSHHSLIPV*SSPDEP
Trigger: GGGTTCATCAGGTGAACTCAACACTGGGATGAGACT...GTGGTGACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGCCTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp GCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCAGTCACCACATTGAATTGGTTCCAGCTTCTCTaGCCTCACACTCTTGCTCAT +
Preference number: 3 (lower is better)
Translates to: AVGIRRAASQSTPVTTLNWFQLL*PHTLAH
Trigger: ATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACCA...ATTCAATGTGGTGACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR TCA 72 bp AACACAGCCAACAGCAACATACCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACACGGGGTGACTTCACT +
Preference number: 3 (lower is better)
Translates to: NTANSNIPSAWH*EQAKRTRGDFT
Trigger: AGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp CCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGCTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 3 (lower is better)
Translates to: PTATYHRHGTESKQKGHGLHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...CCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR GCA 72 bp CCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATaGCACAACACAGCCAACAGCAACATACCATCGGCA +
Preference number: 3 (lower is better)
Translates to: PNSMPPESHANS*HNTANSNIPSA
Trigger: TGCCGATGGTATGTTGCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp AGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGCTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 3 (lower is better)
Translates to: SQQQHTIGMALRASKKDTLHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...CGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp GGATCTGAGGCCCACCACACATTCCTTACCTTCAACTTACCTTTCCAGTCTTCTTGGTTCCAGCTTCTCTaGCCTCACACTCTTGCTCAT +
Preference number: 3 (lower is better)
Translates to: GSEAHHTFLTFNLPFQSSWFQLL*PHTLAH
Trigger: ATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACCA...AGAAGACTGGAAAGGTAAGTTGAAGGTAAGGAATGTGTGGTGGGCCTCAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp CTAAAAGGCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCAGTCACCACTCTAAGGGAATCCATTaGTCTTTCTTCCCATTACTG +
Preference number: 3 (lower is better)
Translates to: LKGSGHKEGCFTVYPSHHSKGIH*SFFPLL
Trigger: CAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGA...GTGGTGACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGCCTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp GGATCTGAGGCCCACCACACATTCCTTACCTTCAACTTACCTTTCCAGTCTTCTCTTTCCTTGGAAACATaGCCTTCATCTCAGCCCCAT +
Preference number: 3 (lower is better)
Translates to: GSEAHHTFLTFNLPFQSSLSLET*PSSQPH
Trigger: ATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAG...AGAAGACTGGAAAGGTAAGTTGAAGGTAAGGAATGTGTGGTGGGCCTCAGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR TCA 72 bp GAAGTAAGAAGTGATTTGAGGAATGAGCCTGGGATCTaGGGCCCACCACACATTCCTTACCTTCAACTTACC +
Preference number: 3 (lower is better)
Translates to: EVRSDLRNEPGI*GPPHIPYLQLT
Trigger: GGTAAGTTGAAGGTAAGGAATGTGTGGTGGGCCTCAGATCCCAGGCTCATTCCTCAAATCACTTCTTACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp GAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCCTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 3 (lower is better)
Translates to: ELKVCLGEGCTVLNITAILHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...GATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp GCCATTAAAACAATGTTCTTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCCTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 3 (lower is better)
Translates to: AIKTMFLTQDQMKRRDKSLHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...GCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAAGAACATTGTTTTAATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp CTTCTAAGGGAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATTGGTTCCAGCTTCTCTaGCCTCACACTCTTGCTCAT +
Preference number: 3 (lower is better)
Translates to: LLRESICLSSHYCGSKTDWFQLL*PHTLAH
Trigger: ATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACCA...ATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp TTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCAATGTTTTCAAGTACACACAGACAGACAGTTCATaGTCGGCAGCCATTAAAACA +
Preference number: 3 (lower is better)
Translates to: LTQDQMKRRDKSNVFKYTQTDSS*SAAIKT
Trigger: TGTTTTAATGGCTGCCGACAATGAACTGTCTGTCTG...TGTGTACTTGAAAACATTGCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp TTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGAAACCATTCAGTCTTTACTaGTTCACATCATACTCTTCT +
Preference number: 3 (lower is better)
Translates to: FQLLLPHTLAHNISFPWKPFSLY*FTSYSS
Trigger: AGAAGAGTATGATGTGAACAAGTAAAGACTGAATGG...TTTCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR GCA 72 bp ACTCTTGCTCATAACATTTCCTTTCCTTGGAAACATTaGCTTCATCTCAGCCCCATTCAGTCTTTACTTGTT +
Preference number: 3 (lower is better)
Translates to: TLAHNISFPWKH*LHLSPIQSLLV
Trigger: AACAAGTAAAGACTGAATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAGGAAATGTTATGAGCAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp ATTCAGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 3 (lower is better)
Translates to: IQSLLVHIILFFQNPVEKLHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...CTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp GTTGATATTGGTATGTACCTTCAAAGGAGTGACATTAAAATTCCAAGCCCTTTACAGACAGACAGTTCATaGTCGGCAGCCATTAAAACA +
Preference number: 3 (lower is better)
Translates to: VDIGMYLQRSDIKIPSPLQTDSS*SAAIKT
Trigger: TGTTTTAATGGCTGCCGACAATGAACTGTCTGTCTG...TAAAGGGCTTGGAATTTTAATGTCACTCCTTTGAAGGTACATACCAATATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355315.8
ENST00000523975.5
3UTR GCA 72 bp GTAGGCATAAATGGCTTCACTCCGTTCTTTCTTCTCTaGATCACGATAGAATTCTATATTAAAACTGCATTC +
Preference number: 3 (lower is better)
Translates to: VGINGFTPFFLL*ITIEFYIKTAF
Trigger: GAATGCAGTTTTAATATAGAATTCTATCGTGATGCAGAGAAGAAAGAACGGAGTGAAGCCATTTATGCCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
3UTR CCA 72 bp TACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTaGAAAAGCTCAATTTCTCATGTAGCCTTACCTAAC +
Preference number: 3 (lower is better)
Translates to: YLFTSYSSFKTQ*KSSISHVALPN
Trigger: GTTAGGTAAGGCTACATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR-3UTR CAA 90 bp GAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCTCCATTCAGTCTTTACTaGTTCACATCATACTCTTCT +
Preference number: 3 (lower is better)
Translates to: ESICLSSHYCGSKTDTTAPFSLY*FTSYSS
Trigger: AGAAGAGTATGATGTGAACAAGTAAAGACTGAATGG...AGCTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CACTCCGTTCTTTCTTCTCTGCATCACGATAGAATTCCAGAATCTCCGGCAGTTCGCATCCCAACTTGCTaGCCCCGCTCCCCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: HSVLSSLHHDRIPESPAVRIPTC*PRSPAA
Trigger: TGCCGCCGGGGAGCGGGGGCAGCAAGTTGGGATGCG...AACTGCCGGAGATTCTGGAATTCTATCGTGATGCAGAGAAGAAAGAACGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521831.5
CDS-3UTR GCA 90 bp CCGTTCTTTCTTCTCTGCATCACGATAGAATTCCAGAATCTCCGGCAGTTTTTGGCGCGCATCCCAACTTaGTGCCCCCGCTCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: PFFLLCITIEFQNLRQFLARIPT*CPRSPA
Trigger: CGCCGGGGAGCGGGGGCAGCAAGTTGGGATGCGCGC...CAAAAACTGCCGGAGATTCTGGAATTCTATCGTGATGCAGAGAAGAAAGAACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000521831.5
CDS-3UTR GCA 90 bp CAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGGGGGCATAAGGAGGGCTaGTTCACAGTCTACCCCAGT +
Preference number: 4 (lower is better)
Translates to: QQQHTIGMALRASKKDTGGHKEG*FTVYPS
Trigger: ACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCC...CCCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp AGCCTGGGATCTGAGGCCCACCACACATTCCTTACCTTCAACTTACCTTTCCAGAATGAGCCTGGGATCTaGGGCCCACCACACATTCCT +
Preference number: 4 (lower is better)
Translates to: SLGSEAHHTFLTFNLPFQNEPGI*GPPHIP
Trigger: AGGAATGTGTGGTGGGCCTCAGATCCCAGGCTCATT...CTGGAAAGGTAAGTTGAAGGTAAGGAATGTGTGGTGGGCCTCAGATCCCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp AGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGTCACCTGATGAACCCTaGCCCTTTTCCCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SQQQHTIGMALRASKKDTSPDEP*PFSLPN
Trigger: GTTGGGCAGGGAAAAGGGTCAGGGTTCATCAGGTGA...CGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp GCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCAGTCACCACATTGAATAAAAAGGACACGGGGTaGCTTCACTGTCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: AVGIRRAASQSTPVTTLNKKDTG*LHCLHL
Trigger: CAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTT...ATTCAATGTGGTGACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp GGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCACTTGAACCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACA +
Preference number: 4 (lower is better)
Translates to: GTESKQKGHGVTSLSPLEPSAWH*EQAKRT
Trigger: TGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGG...TTCAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR TCA 90 bp CAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACCCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACA +
Preference number: 4 (lower is better)
Translates to: QPTATYHRHGTESKQKGHPSAWH*EQAKRT
Trigger: TGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGG...GTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR TCA 90 bp AACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCAACAGCTCACCTGATGAACCCTaGCCCTTTTCCCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: NSMPPESHANSCHNTANSSPDEP*PFSLPN
Trigger: GTTGGGCAGGGAAAAGGGTCAGGGTTCATCAGGTGA...GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp GCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCAGTCACCACATTGAATGTCTCATCCCAGTGTTaGGTTCACCTGATGAACCCT +
Preference number: 4 (lower is better)
Translates to: AVGIRRAASQSTPVTTLNVSSQC*VHLMNP
Trigger: AGGGTTCATCAGGTGAACTCAACACTGGGATGAGAC...ATTCAATGTGGTGACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp GGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCACTTGAAAAAAAGGACACGGGGTaGCTTCACTGTCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: GTESKQKGHGVTSLSPLEKKDTG*LHCLHL
Trigger: CAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTT...TTCAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR TCA 90 bp AGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGAAAAAGGACACGGGGTaGCTTCACTGTCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: SQQQHTIGMALRASKKDTKKDTG*LHCLHL
Trigger: CAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTT...CGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR TCA 90 bp TTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCAATGAGCCTGGGATCTaGGGCCCACCACACATTCCT +
Preference number: 4 (lower is better)
Translates to: LPNSMPPESHANSCHNTANEPGI*GPPHIP
Trigger: AGGAATGTGTGGTGGGCCTCAGATCCCAGGCTCATT...GGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp CTAAAAGGCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCAGTCACCACCTGTGGTTCAAAAACTaGTACTACAGCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LKGSGHKEGCFTVYPSHHLWFKN*YYSCRR
Trigger: CCTTCTGCAGCTGTAGTATCAGTTTTTGAACCACAG...GTGGTGACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGCCTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGGGGCATAAGGAGGGCTaGTTCACAGTCTACCCCAGT +
Preference number: 4 (lower is better)
Translates to: PYLTPCLQKVMQTHATTQGHKEG*FTVYPS
Trigger: ACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCC...CTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp GCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTAACTTAAGGTCTGTCTaGGTGAGGGGTGTACAGTCT +
Preference number: 4 (lower is better)
Translates to: ATYHRHGTESKQKGHGVTNLRSV*VRGVQS
Trigger: AGACTGTACACCCCTCACCCAGACAGACCTTAAGTT...AGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR TCA 90 bp TCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCAATGAGCCTGGGATCTaGGGCCCACCACACATTCCT +
Preference number: 4 (lower is better)
Translates to: SHVALPNSMPPESHANSCNEPGI*GPPHIP
Trigger: AGGAATGTGTGGTGGGCCTCAGATCCCAGGCTCATT...GCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp TCGGCAGCCATTAAAACAATGTTCTTGACCCAAGACCAGATGAAGAGAAGGGACTCACCTGATGAACCCTaGCCCTTTTCCCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SAAIKTMFLTQDQMKRRDSPDEP*PFSLPN
Trigger: GTTGGGCAGGGAAAAGGGTCAGGGTTCATCAGGTGA...GTCCCTTCTCTTCATCTGGTCTTGGGTCAAGAACATTGTTTTAATGGCTGCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp AGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: SQQQHTIGMALRASKKDTSHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...CGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CCACAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAGGTTCCAGCTTCTCTTaGCTCACACTCTTGCTCATA +
Preference number: 4 (lower is better)
Translates to: PQHSQQQHTIGMALRASKGSSFS*LTLLLI
Trigger: TATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACC...TTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp TCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCGGGCATAAGGAGGGCTaGTTCACAGTCTACCCCAGT +
Preference number: 4 (lower is better)
Translates to: SHVALPNSMPPESHANSCGHKEG*FTVYPS
Trigger: ACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCC...GCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp ACAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAACTCCAAACACGTCAATaGCTCACGCAGCAGGACCTT +
Preference number: 4 (lower is better)
Translates to: TTQPTATYHRHGTESKQKLQTRQ*LTQQDL
Trigger: AAGGTCCTGCTGCGTGAGCCATTGACGTGTTTGGAG...TTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303759.3
CDS-3UTR CCA 90 bp GGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCACTTGAAAACTTAAGGTCTGTCTaGGTGAGGGGTGTACAGTCT +
Preference number: 4 (lower is better)
Translates to: GTESKQKGHGVTSLSPLENLRSV*VRGVQS
Trigger: AGACTGTACACCCCTCACCCAGACAGACCTTAAGTT...TTCAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR TCA 90 bp CAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGTCCCCTCCTTTGCATaGGTTCCTCGTGTATTAACT +
Preference number: 4 (lower is better)
Translates to: QHSQQQHTIGMALRASKKVPSFA*VPRVLT
Trigger: AGTTAATACACGAGGAACTCATGCAAAGGAGGGGAC...CTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR TCA 90 bp AGCTCAATTTCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAATGAGCCTGGGATCTaGGGCCCACCACACATTCCT +
Preference number: 4 (lower is better)
Translates to: SSISHVALPNSMPPESHANEPGI*GPPHIP
Trigger: AGGAATGTGTGGTGGGCCTCAGATCCCAGGCTCATT...TGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGAAATTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CACTGTCTCCACTTGAAGAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: HCLHLKNLRSVWVRGVQSSHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...AGACTGTACACCCCTCACCCAGACAGACCTTAAGTTCTTCAAGTGGAGACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGGTTCCAGCTTCTCTTaGCTCACACTCTTGCTCATA +
Preference number: 4 (lower is better)
Translates to: QHSQQQHTIGMALRASKKGSSFS*LTLLLI
Trigger: TATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACC...CTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp AGGACGACGAGGCAGCTAACAAGAGCTCTCAAGGATCTTTCACGGCCAGAATCTTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RTTRQLTRALKDLSRPESCRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...AGATTCTGGCCGTGAAAGATCCTTGAGAGCTCTTGTTAGCTGCCTCGTCGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523532.5
CDS-3UTR CCA 90 bp CCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGACAATCAAGGTCATGTaGCTTAGAAACCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PTATYHRHGTESKQKGHGTIKVM*LRNLSL
Trigger: CAAGCTCAGGTTTCTAAGCCACATGACCTTGATTGT...CCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp GAATGTGGTTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACA +
Preference number: 4 (lower is better)
Translates to: ECGSSFSCLTLLLITFPFPSAWH*EQAKRT
Trigger: TGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGG...GAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACCACATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp TTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCCTACAGGATACTCTCTaGATGTGGTTCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPNSMPPESHANSCHNTALQDTL*MWFQLL
Trigger: GAGAAGCTGGAACCACATTCAGAGAGTATCCTGTAG...GGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp GCCATTAAAACAATGTTCTTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCAATGAGCCTGGGATCTaGGGCCCACCACACATTCCT +
Preference number: 4 (lower is better)
Translates to: AIKTMFLTQDQMKRRDKSNEPGI*GPPHIP
Trigger: AGGAATGTGTGGTGGGCCTCAGATCCCAGGCTCATT...GCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAAGAACATTGTTTTAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp CACTGTCTCCACTTGAAGAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTCTGTGGTTCAAAAACTaGTACTACAGCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: HCLHLKNLRSVWVRGVQSLWFKN*YYSCRR
Trigger: CCTTCTGCAGCTGTAGTATCAGTTTTTGAACCACAG...AGACTGTACACCCCTCACCCAGACAGACCTTAAGTTCTTCAAGTGGAGACAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp AAACAAACGATTCTAAAAGGCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACGTCTCATCCCAGTGTTaGGTTCACCTGATGAACCCT +
Preference number: 4 (lower is better)
Translates to: KQTILKGSGHKEGCFTVYVSSQC*VHLMNP
Trigger: AGGGTTCATCAGGTGAACTCAACACTGGGATGAGAC...GTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGCCTTTTAGAATCGTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp TCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCGTCTCATCCCAGTGTTaGGTTCACCTGATGAACCCT +
Preference number: 4 (lower is better)
Translates to: SHVALPNSMPPESHANSCVSSQC*VHLMNP
Trigger: AGGGTTCATCAGGTGAACTCAACACTGGGATGAGAC...GCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCAACGAAAGTCCCCTCCTTTaGATGAGTTCCTCGTGTATT +
Preference number: 4 (lower is better)
Translates to: PNSMPPESHANSCHNTANESPLL*MSSSCI
Trigger: AATACACGAGGAACTCATGCAAAGGAGGGGACTTTC...GTTGGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CCACAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAATTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: PQHSQQQHTIGMALRASKFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...TTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR GCA 90 bp GGATCTGAGGCCCACCACACATTCCTTACCTTCAACTTACCTTTCCAGTCTTCTGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 4 (lower is better)
Translates to: GSEAHHTFLTFNLPFQSSASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...AGAAGACTGGAAAGGTAAGTTGAAGGTAAGGAATGTGTGGTGGGCCTCAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp ACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCACTTGAAGAAGGTTCCAGCTTCTCTTaGCTCACACTCTTGCTCATA +
Preference number: 4 (lower is better)
Translates to: TESKQKGHGVTSLSPLEEGSSFS*LTLLLI
Trigger: TATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACC...TTCTTCAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCGTTCTTTCTTCTCTaGATCACGATAGAATTCTCA +
Preference number: 4 (lower is better)
Translates to: HRHGTESKQKGHGVTSLSPFFLL*ITIEFS
Trigger: TGAGAATTCTATCGTGATGCAGAGAAGAAAGAACGG...AGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521524.5
ENST00000523061.5
CDS-3UTR CCA 90 bp GATTTCATCTCTTTCTGCTGCCGTAGGCATAAATGGCTTCACTCCGTTCTTTCTCTCCAAACACGTCAATaGCTCACGCAGCAGGACCTT +
Preference number: 4 (lower is better)
Translates to: DFISFCCRRHKWLHSVLSLQTRQ*LTQQDL
Trigger: AAGGTCCTGCTGCGTGAGCCATTGACGTGTTTGGAG...AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521831.5
CDS-3UTR CCA 90 bp GGATCTGAGGCCCACCACACATTCCTTACCTTCAACTTACCTTTCCAGTCTTCTAACTTAAGGTCTGTCTaGGTGAGGGGTGTACAGTCT +
Preference number: 4 (lower is better)
Translates to: GSEAHHTFLTFNLPFQSSNLRSV*VRGVQS
Trigger: AGACTGTACACCCCTCACCCAGACAGACCTTAAGTT...AGAAGACTGGAAAGGTAAGTTGAAGGTAAGGAATGTGTGGTGGGCCTCAGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp CATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCAAGGATCTCCCTACAGCCATCAGTaGGAAAGGATTGTGGGTACT +
Preference number: 4 (lower is better)
Translates to: HSYSLEDDEAANKSSQGSPYSHQ*ERIVGT
Trigger: AGTACCCACAATCCTTTCCCACTGATGGCTGTAGGG...AGATCCTTGAGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517933.5
CDS-3UTR TCA 90 bp GAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCCCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACA +
Preference number: 4 (lower is better)
Translates to: ELKVCLGEGCTVLNITAIPSAWH*EQAKRT
Trigger: TGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGG...GATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR TCA 90 bp TCAATTTCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACCCATCGGCATGGCACTaGGAGCAAGCAAAAAGGACA +
Preference number: 4 (lower is better)
Translates to: SISHVALPNSMPPESHANPSAWH*EQAKRT
Trigger: TGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGG...GTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGAAATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR TCA 90 bp TTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCAATGTTTTCAAGTACACATCACCTGATGAACCCTaGCCCTTTTCCCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LTQDQMKRRDKSNVFKYTSPDEP*PFSLPN
Trigger: GTTGGGCAGGGAAAAGGGTCAGGGTTCATCAGGTGA...TGTGTACTTGAAAACATTGCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp CAAACGATTCTAAAAGGCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCCCCCAGTCACCACATTaGATAATCGTATTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: QTILKGSGHKEGCFTVYPPQSPH*IIVLCL
Trigger: TAAACACAATACGATTATTCAATGTGGTGACTGGGG...GGGGTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGCCTTTTAGAATCGTTTG
47% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp ACAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGAAAGTCCCCTCCTTTaGATGAGTTCCTCGTGTATT +
Preference number: 4 (lower is better)
Translates to: TTQPTATYHRHGTESKQKESPLL*MSSSCI
Trigger: AATACACGAGGAACTCATGCAAAGGAGGGGACTTTC...TTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCAAGGAGAAAGTCCCCTCCTTTaGATGAGTTCCTCGTGTATT +
Preference number: 4 (lower is better)
Translates to: LHSYSLEDDEAANKSSQGESPLL*MSSSCI
Trigger: AATACACGAGGAACTCATGCAAAGGAGGGGACTTTC...TCCTTGAGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR GCA 90 bp CCACAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAACCAGTTCGAGTTTGGTaGATGAGTTTCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: PQHSQQQHTIGMALRASKPVRVW*MSFFTF
Trigger: AAATGTGAAGAAACTCATGCACCAAACTCGAACTGG...TTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACCCAGTTCGAGTTTGGTaGATGAGTTTCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: QPTATYHRHGTESKQKGHPVRVW*MSFFTF
Trigger: AAATGTGAAGAAACTCATGCACCAAACTCGAACTGG...GTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGTTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: QHSQQQHTIGMALRASKKFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...CTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR GCA 90 bp AAACAAACGATTCTAAAAGGCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: KQTILKGSGHKEGCFTVYSHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...GTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGCCTTTTAGAATCGTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp GGTTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGAAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: GSSFSCLTLLLITFPFLGSHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...TCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp ACGACGAGGCAGCTAACAAGAGCTCTCAAGGATCTTTCACGGCCAGAATCTCCGCCGTTCTTTCTTCTCTaGATCACGATAGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: TTRQLTRALKDLSRPESPPFFLL*ITIEFY
Trigger: ATAGAATTCTATCGTGATGCAGAGAAGAAAGAACGG...CGGAGATTCTGGCCGTGAAAGATCCTTGAGAGCTCTTGTTAGCTGCCTCGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523532.5
CDS-3UTR CCA 90 bp ACAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAATGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TTQPTATYHRHGTESKQKCRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...TTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR TCA 90 bp GAAGAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAAAAAAGGACACGGGGTaGCTTCACTGTCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: EELKVCLGEGCTVLNITAKKDTG*LHCLHL
Trigger: CAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTT...TGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTCTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR TCA 90 bp CCTTTCCTTGGAAACATTGCCTTCATCTCAGCCCCATTCAGTCTTTACTTGTTCCTACAGGATACTCTCTaGATGTGGTTCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PFLGNIAFISAPFSLYLFLQDTL*MWFQLL
Trigger: GAGAAGCTGGAACCACATTCAGAGAGTATCCTGTAG...GAACAAGTAAAGACTGAATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CACTCCGTTCTTTCTTCTCTGCATCACGATAGAATTCCAGAATCTCCGGCAGTTGAAAGTCCCCTCCTTTaGATGAGTTCCTCGTGTATT +
Preference number: 4 (lower is better)
Translates to: HSVLSSLHHDRIPESPAVESPLL*MSSSCI
Trigger: AATACACGAGGAACTCATGCAAAGGAGGGGACTTTC...AACTGCCGGAGATTCTGGAATTCTATCGTGATGCAGAGAAGAAAGAACGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518801.5
CDS-3UTR GCA 90 bp CCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCAACCCAGTTCGAGTTTGGTaGATGAGTTTCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: PNSMPPESHANSCHNTANPVRVW*MSFFTF
Trigger: AAATGTGAAGAAACTCATGCACCAAACTCGAACTGG...GTTGGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR GCA 90 bp GGATCTGAGGCCCACCACACATTCCTTACCTTCAACTTACCTTTCCAGTCTTCTTTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: GSEAHHTFLTFNLPFQSSFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...AGAAGACTGGAAAGGTAAGTTGAAGGTAAGGAATGTGTGGTGGGCCTCAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp ACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCACTTGAAGAATTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: TESKQKGHGVTSLSPLEEFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...TTCTTCAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CCGTTCTTTCTTCTCTGCATCACGATAGAATTCCAGAATCTCCGGCAGTTTTTGGGTTCCAGCTTCTCTTaGCTCACACTCTTGCTCATA +
Preference number: 4 (lower is better)
Translates to: PFFLLCITIEFQNLRQFLGSSFS*LTLLLI
Trigger: TATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACC...CAAAAACTGCCGGAGATTCTGGAATTCTATCGTGATGCAGAGAAGAAAGAACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518801.5
CDS-3UTR GCA 90 bp ACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAATTTCTCATGTAGCCGGGCATAAGGAGGGCTaGTTCACAGTCTACCCCAGT +
Preference number: 4 (lower is better)
Translates to: TSYSSFKTQWKSSISHVAGHKEG*FTVYPS
Trigger: ACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCC...GGCTACATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp CATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCAAGGATCTTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: HSYSLEDDEAANKSSQGSCRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...AGATCCTTGAGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CCA 90 bp CCTTTCCTTGGAAACATTGCCTTCATCTCAGCCCCATTCAGTCTTTACTTGTTCAACTTAAGGTCTGTCTaGGTGAGGGGTGTACAGTCT +
Preference number: 4 (lower is better)
Translates to: PFLGNIAFISAPFSLYLFNLRSV*VRGVQS
Trigger: AGACTGTACACCCCTCACCCAGACAGACCTTAAGTT...GAACAAGTAAAGACTGAATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp GCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCAGTCACCACATTGAATTCTTTCAAAACCCAGTaGAAAAGCTCAATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: AVGIRRAASQSTPVTTLNSFKTQ*KSSISH
Trigger: ATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGA...ATTCAATGTGGTGACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp TTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCACAATCAAGGTCATGTaGCTTAGAAACCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LPNSMPPESHANSCHNTATIKVM*LRNLSL
Trigger: CAAGCTCAGGTTTCTAAGCCACATGACCTTGATTGT...GGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp CAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGTTACCAGTTCGAGTTTaGTGCATGAGTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: QHSQQQHTIGMALRASKKLPVRV*CMSFFT
Trigger: TGTGAAGAAACTCATGCACCAAACTCGAACTGGTAA...CTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR TCA 90 bp ATTTCATCTCTTTCTGCTGCCGTAGGCATAAATGGCTTCACTCCGTTCTTTCTTGTCCCCTCCTTTGCATaGGTTCCTCGTGTATTAACT +
Preference number: 4 (lower is better)
Translates to: ISSLSAAVGINGFTPFFLVPSFA*VPRVLT
Trigger: AGTTAATACACGAGGAACTCATGCAAAGGAGGGGAC...AAGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR TCA 90 bp CAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGTTCGAGTTTGGTGCATaGGTTTCTTCACATTTCATT +
Preference number: 4 (lower is better)
Translates to: QHSQQQHTIGMALRASKKFEFGA*VSSHFI
Trigger: AATGAAATGTGAAGAAACTCATGCACCAAACTCGAA...CTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR TCA 90 bp CTTCTAAGGGAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATTCACCTGATGAACCCTaGCCCTTTTCCCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LLRESICLSSHYCGSKTDSPDEP*PFSLPN
Trigger: GTTGGGCAGGGAAAAGGGTCAGGGTTCATCAGGTGA...ATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp ACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCACTTGAAGAACCCCAGTCACCACATTaGATAATCGTATTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: TESKQKGHGVTSLSPLEEPQSPH*IIVLCL
Trigger: TAAACACAATACGATTATTCAATGTGGTGACTGGGG...TTCTTCAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCAAGGACCAGTTCGAGTTTGGTaGATGAGTTTCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: LHSYSLEDDEAANKSSQGPVRVW*MSFFTF
Trigger: AAATGTGAAGAAACTCATGCACCAAACTCGAACTGG...TCCTTGAGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR GCA 90 bp TCGGCAGCCATTAAAACAATGTTCTTGACCCAAGACCAGATGAAGAGAAGGGACTTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: SAAIKTMFLTQDQMKRRDFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...GTCCCTTCTCTTCATCTGGTCTTGGGTCAAGAACATTGTTTTAATGGCTGCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CACTCCGTTCTTTCTTCTCTGCATCACGATAGAATTCCAGAATCTCCGGCAGTTTTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: HSVLSSLHHDRIPESPAVFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...AACTGCCGGAGATTCTGGAATTCTATCGTGATGCAGAGAAGAAAGAACGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000519367.1
ENST00000521831.5
CDS-3UTR GCA 90 bp ATTTCATCTCTTTCTGCTGCCGTAGGCATAAATGGCTTCACTCCGTTCTTTCTTAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: ISSLSAAVGINGFTPFFLSHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...AAGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
CDS-3UTR GCA 90 bp GAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 4 (lower is better)
Translates to: ELKVCLGEGCTVLNITAIASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...GATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR GCA 90 bp ATTTCATCTCTTTCTGCTGCCGTAGGCATAAATGGCTTCACTCCGTTCTTTCTTGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 4 (lower is better)
Translates to: ISSLSAAVGINGFTPFFLASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...AAGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
CDS-3UTR CCA 90 bp AAACCTGAGCTTGGTTTTAGACTCAGACAGACAGTTCATTGTCGGCAGCCATTATGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KPELGFRLRQTVHCRQPLCRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...TAATGGCTGCCGACAATGAACTGTCTGTCTGAGTCTAAAACCAAGCTCAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp ACTCCGTTCTTTCTTCTCTGCATCACGATAGAATTCCAGAATCTCCGGCAGTTTTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TPFFLLCITIEFQNLRQFCRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...AAACTGCCGGAGATTCTGGAATTCTATCGTGATGCAGAGAAGAAAGAACGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000519367.1
ENST00000521831.5
CDS-3UTR CCA 90 bp GATTTCATCTCTTTCTGCTGCCGTAGGCATAAATGGCTTCACTCCGTTCTTTCTTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: DFISFCCRRHKWLHSVLSCRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000518801.5
ENST00000519367.1
ENST00000521524.5
ENST00000521831.5
ENST00000521982.5
ENST00000523061.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CCA 90 bp CAAACGATTCTAAAAGGCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCTCTTTCAAAACCCAGTaGAAAAGCTCAATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: QTILKGSGHKEGCFTVYPSFKTQ*KSSISH
Trigger: ATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGA...GGGGTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGCCTTTTAGAATCGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp CAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACTCTTTCAAAACCCAGTaGAAAAGCTCAATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: QPTATYHRHGTESKQKGHSFKTQ*KSSISH
Trigger: ATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGA...GTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp ATATTAAAACTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCGTCCCCTCCTTTGCATaGGTTCCTCGTGTATTAACT +
Preference number: 4 (lower is better)
Translates to: ILKLHSYSLEDDEAANKSVPSFA*VPRVLT
Trigger: AGTTAATACACGAGGAACTCATGCAAAGGAGGGGAC...GCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAGTTTTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR TCA 90 bp TTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCAATGTTTTCAAGTACACACTACAGGATACTCTCTaGATGTGGTTCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LTQDQMKRRDKSNVFKYTLQDTL*MWFQLL
Trigger: GAGAAGCTGGAACCACATTCAGAGAGTATCCTGTAG...TGTGTACTTGAAAACATTGCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp GCCATTAAAACAATGTTCTTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCCTGTGGTTCAAAAACTaGTACTACAGCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AIKTMFLTQDQMKRRDKSLWFKN*YYSCRR
Trigger: CCTTCTGCAGCTGTAGTATCAGTTTTTGAACCACAG...GCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAAGAACATTGTTTTAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp ACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAATTTCTCATGTAGCCGTCTCATCCCAGTGTTaGGTTCACCTGATGAACCCT +
Preference number: 4 (lower is better)
Translates to: TSYSSFKTQWKSSISHVAVSSQC*VHLMNP
Trigger: AGGGTTCATCAGGTGAACTCAACACTGGGATGAGAC...GGCTACATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp AAACAAACGATTCTAAAAGGCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACCCCCAGTCACCACATTaGATAATCGTATTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: KQTILKGSGHKEGCFTVYPQSPH*IIVLCL
Trigger: TAAACACAATACGATTATTCAATGTGGTGACTGGGG...GTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGCCTTTTAGAATCGTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp TCGGCAGCCATTAAAACAATGTTCTTGACCCAAGACCAGATGAAGAGAAGGGACCCCCAGTCACCACATTaGATAATCGTATTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: SAAIKTMFLTQDQMKRRDPQSPH*IIVLCL
Trigger: TAAACACAATACGATTATTCAATGTGGTGACTGGGG...GTCCCTTCTCTTCATCTGGTCTTGGGTCAAGAACATTGTTTTAATGGCTGCCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp GGTTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGACCAGTTCGAGTTTGGTaGATGAGTTTCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: GSSFSCLTLLLITFPFLGPVRVW*MSFFTF
Trigger: AAATGTGAAGAAACTCATGCACCAAACTCGAACTGG...TCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CAGTGGAAAAGCTCAATTTCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAATTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: QWKSSISHVALPNSMPPEFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...TTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGAAATTGAGCTTTTCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR GCA 90 bp GATTTCATCTCTTTCTGCTGCCGTAGGCATAAATGGCTTCACTCCGTTCTTTCTTTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: DFISFCCRRHKWLHSVLSFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000518801.5
ENST00000519367.1
ENST00000521524.5
ENST00000521831.5
ENST00000521982.5
ENST00000523061.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR GCA 90 bp TTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCAATGTTTTCAAGTACACAGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 4 (lower is better)
Translates to: LTQDQMKRRDKSNVFKYTASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...TGTGTACTTGAAAACATTGCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp TCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAATGGGCATAAGGAGGGCTaGTTCACAGTCTACCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLLVHIILFFQNPVEKLNGHKEG*FTVYPS
Trigger: ACTGGGGTAGACTGTGAAGCAGCCCTCCTTATGCCC...ATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp ATTTCATCTCTTTCTGCTGCCGTAGGCATAAATGGCTTCACTCCGTTCTTTCTTTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ISSLSAAVGINGFTPFFLCRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...AAGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000518801.5
ENST00000519367.1
ENST00000521524.5
ENST00000521831.5
ENST00000521982.5
ENST00000523061.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR TCA 90 bp TCGGCAGCCATTAAAACAATGTTCTTGACCCAAGACCAGATGAAGAGAAGGGACTTCGAGTTTGGTGCATaGGTTTCTTCACATTTCATT +
Preference number: 4 (lower is better)
Translates to: SAAIKTMFLTQDQMKRRDFEFGA*VSSHFI
Trigger: AATGAAATGTGAAGAAACTCATGCACCAAACTCGAA...GTCCCTTCTCTTCATCTGGTCTTGGGTCAAGAACATTGTTTTAATGGCTGCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp TCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCTTCGAGTTTGGTGCATaGGTTTCTTCACATTTCATT +
Preference number: 4 (lower is better)
Translates to: SHVALPNSMPPESHANSCFEFGA*VSSHFI
Trigger: AATGAAATGTGAAGAAACTCATGCACCAAACTCGAA...GCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR TCA 90 bp AAACAAACGATTCTAAAAGGCAGTGGGCATAAGGAGGGCTGCTTCACAGTCTACTTCGAGTTTGGTGCATaGGTTTCTTCACATTTCATT +
Preference number: 4 (lower is better)
Translates to: KQTILKGSGHKEGCFTVYFEFGA*VSSHFI
Trigger: AATGAAATGTGAAGAAACTCATGCACCAAACTCGAA...GTAGACTGTGAAGCAGCCCTCCTTATGCCCACTGCCTTTTAGAATCGTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp CATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCAAGGATCTTTCGAGTTTGGTGCATaGGTTTCTTCACATTTCATT +
Preference number: 4 (lower is better)
Translates to: HSYSLEDDEAANKSSQGSFEFGA*VSSHFI
Trigger: AATGAAATGTGAAGAAACTCATGCACCAAACTCGAA...AGATCCTTGAGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR TCA 90 bp AATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCTGAAAAAGGACACGGGGTaGCTTCACTGTCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: NPFVFLPITVVQKLILQLKKDTG*LHCLHL
Trigger: CAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTT...CAGCTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp CTTGAAGAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACACTGTGGTTCAAAAACTaGTACTACAGCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LEELKVCLGEGCTVLNITLWFKN*YYSCRR
Trigger: CCTTCTGCAGCTGTAGTATCAGTTTTTGAACCACAG...TGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTCTTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp ACTCCGTTCTTTCTTCTCTGCATCACGATAGAATTCCAGAATCTCCGGCAGTTTCCCCAGTCACCACATTaGATAATCGTATTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: TPFFLLCITIEFQNLRQFPQSPH*IIVLCL
Trigger: TAAACACAATACGATTATTCAATGTGGTGACTGGGG...AAACTGCCGGAGATTCTGGAATTCTATCGTGATGCAGAGAAGAAAGAACGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518801.5
CDS-3UTR GCA 90 bp GATTTCATCTCTTTCTGCTGCCGTAGGCATAAATGGCTTCACTCCGTTCTTTCTCCAGTTCGAGTTTGGTaGATGAGTTTCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: DFISFCCRRHKWLHSVLSPVRVW*MSFFTF
Trigger: AAATGTGAAGAAACTCATGCACCAAACTCGAACTGG...AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR GCA 90 bp ATTTCATCTCTTTCTGCTGCCGTAGGCATAAATGGCTTCACTCCGTTCTTTCTTTTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: ISSLSAAVGINGFTPFFLFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...AAGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000518801.5
ENST00000519367.1
ENST00000521524.5
ENST00000521831.5
ENST00000521982.5
ENST00000523061.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR GCA 90 bp TTAAAACTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTTTCATCTCTTTCTGCTaGCGTAGGCATAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: LKLHSYSLEDDEAANKSSFISFC*RRHKWL
Trigger: AAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAA...AGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CCA 90 bp TCAATTTCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTACCCAGTTCGAGTTTaGTGCATGAGTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: SISHVALPNSMPPESHANYPVRV*CMSFFT
Trigger: TGTGAAGAAACTCATGCACCAAACTCGAACTGGGTA...GTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGAAATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303759.3
ENST00000396723.9
CDS-3UTR CCA 90 bp TTAAAACTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTTACCCAGTTCGAGTTTaGTGCATGAGTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LKLHSYSLEDDEAANKSSYPVRV*CMSFFT
Trigger: TGTGAAGAAACTCATGCACCAAACTCGAACTGGGTA...AGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CCA 90 bp CTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCATTTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LKVCLGEGCTVLNITAIICRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...AATGATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR CCA 90 bp GGGAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGAACTTAAGGTCTGTCTaGGTGAGGGGTGTACAGTCT +
Preference number: 4 (lower is better)
Translates to: GNPFVFLPITVVQKLILQNLRSV*VRGVQS
Trigger: AGACTGTACACCCCTCACCCAGACAGACCTTAAGTT...CTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
3UTR CAA 72 bp AACATTGCCTTCATCTCAGCCCCATTCAGTCTTTACTaGTTCACATCATACTCTTCTTTCAAAACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: NIAFISAPFSLY*FTSYSSFKTQW
Trigger: CCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACTGAATGGGGCTGAGATGAAGGCAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp AATGTTGATATTGGTATGTACCTTCAAAGGAGTGACATTAAAATTCCAAGCCCTAAAAAGGACACGGGGTaGCTTCACTGTCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: NVDIGMYLQRSDIKIPSPKKDTG*LHCLHL
Trigger: CAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTT...AGGGCTTGGAATTTTAATGTCACTCCTTTGAAGGTACATACCAATATCAACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355315.8
ENST00000523975.5
CDS-3UTR TCA 90 bp GGGAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCTGTGGTTCAAAAACTaGTACTACAGCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GNPFVFLPITVVQKLILQLWFKN*YYSCRR
Trigger: CCTTCTGCAGCTGTAGTATCAGTTTTTGAACCACAG...CTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp TTAAAACTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCCAGTTCGAGTTTGGTaGATGAGTTTCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: LKLHSYSLEDDEAANKSSPVRVW*MSFFTF
Trigger: AAATGTGAAGAAACTCATGCACCAAACTCGAACTGG...AGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAGTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR GCA 90 bp AGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: SLYLFTSYSSFKTQWKSSSHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...TGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CTTCTAAGGGAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATGGTTCCAGCTTCTCTTaGCTCACACTCTTGCTCATA +
Preference number: 4 (lower is better)
Translates to: LLRESICLSSHYCGSKTDGSSFS*LTLLLI
Trigger: TATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACC...ATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp AAACTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCAACCGTTCTTTCTTCTCTaGATCACGATAGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: KLHSYSLEDDEAANKSSQPFFLL*ITIEFY
Trigger: ATAGAATTCTATCGTGATGCAGAGAAGAAAGAACGG...TTGAGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CCA 90 bp ACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAATTTCTCATGTAGCCTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TSYSSFKTQWKSSISHVACRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...GGCTACATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp CTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAATTTCTCAAACTTAAGGTCTGTCTaGGTGAGGGGTGTACAGTCT +
Preference number: 4 (lower is better)
Translates to: LVHIILFFQNPVEKLNFSNLRSV*VRGVQS
Trigger: AGACTGTACACCCCTCACCCAGACAGACCTTAAGTT...TGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp GAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCTTACCAGTTCGAGTTTaGTGCATGAGTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: ELKVCLGEGCTVLNITAILPVRV*CMSFFT
Trigger: TGTGAAGAAACTCATGCACCAAACTCGAACTGGTAA...GATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR TCA 90 bp TCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAATGTCCCCTCCTTTGCATaGGTTCCTCGTGTATTAACT +
Preference number: 4 (lower is better)
Translates to: SLLVHIILFFQNPVEKLNVPSFA*VPRVLT
Trigger: AGTTAATACACGAGGAACTCATGCAAAGGAGGGGAC...ATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp ATTCAGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGGTCCCCTCCTTTGCATaGGTTCCTCGTGTATTAACT +
Preference number: 4 (lower is better)
Translates to: IQSLLVHIILFFQNPVEKVPSFA*VPRVLT
Trigger: AGTTAATACACGAGGAACTCATGCAAAGGAGGGGAC...CTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp TTAAAACTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTTTCGAGTTTGGTGCATaGGTTTCTTCACATTTCATT +
Preference number: 4 (lower is better)
Translates to: LKLHSYSLEDDEAANKSSFEFGA*VSSHFI
Trigger: AATGAAATGTGAAGAAACTCATGCACCAAACTCGAA...AGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAGTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR TCA 90 bp TTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGAAATTCGAGTTTGGTGCATaGGTTTCTTCACATTTCATT +
Preference number: 4 (lower is better)
Translates to: FQLLLPHTLAHNISFPWKFEFGA*VSSHFI
Trigger: AATGAAATGTGAAGAAACTCATGCACCAAACTCGAA...TTTCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp GCAAATAGAAATCTTACTTCTAAGGGAATCCATTTGTCTTTCTTCCCATTACTGCTACAGGATACTCTCTaGATGTGGTTCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ANRNLTSKGIHLSFFPLLLQDTL*MWFQLL
Trigger: GAGAAGCTGGAACCACATTCAGAGAGTATCCTGTAG...CAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGAAGTAAGATTTCTATTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR TCA 90 bp ACAGAGGATAAAGTTGAAAAGTTAAGTTTCCCTACAGCCATCAGTGGGAAAGGAAAGGATTGTGGGTACTaGCTAATTTTAGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TEDKVEKLSFPTAISGKGKDCGY*LILGFS
Trigger: ACTGAAGCCTAAAATTAGTCAGTACCCACAATCCTT...TCCTTTCCCACTGATGGCTGTAGGGAAACTTAACTTTTCAACTTTATCCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517933.5
CDS-3UTR GCA 90 bp GAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCTGAAAGTCCCCTCCTTTaGATGAGTTCCTCGTGTATT +
Preference number: 4 (lower is better)
Translates to: ESICLSSHYCGSKTDTTAESPLL*MSSSCI
Trigger: AATACACGAGGAACTCATGCAAAGGAGGGGACTTTC...AGCTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp GTTGATATTGGTATGTACCTTCAAAGGAGTGACATTAAAATTCCAAGCCCTTTAAGTCATGCAAACTCATaGCACAACACAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: VDIGMYLQRSDIKIPSPLSHANS*HNTANS
Trigger: GCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACT...TAAAGGGCTTGGAATTTTAATGTCACTCCTTTGAAGGTACATACCAATATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355315.8
ENST00000523975.5
CDS-3UTR GCA 90 bp GCAAATAGAAATCTTACTTCTAAGGGAATCCATTTGTCTTTCTTCCCATTACTGGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 4 (lower is better)
Translates to: ANRNLTSKGIHLSFFPLLASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...CAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGAAGTAAGATTTCTATTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp ATTCAGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGGCCTCCAGAAAGTCATaGAAACTCATGCCACAACAC +
Preference number: 4 (lower is better)
Translates to: IQSLLVHIILFFQNPVEKASRKS*KLMPQH
Trigger: GTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGC...CTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp CTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCATTCCGTTCTTTCTTCTCTaGATCACGATAGAATTCTCA +
Preference number: 4 (lower is better)
Translates to: LKVCLGEGCTVLNITAIIPFFLL*ITIEFS
Trigger: TGAGAATTCTATCGTGATGCAGAGAAGAAAGAACGG...AATGATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521524.5
ENST00000523061.5
CDS-3UTR GCA 90 bp TTAAAACTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCCGTTCTTTCTTCTCTaGATCACGATAGAATTCTAT +
Preference number: 4 (lower is better)
Translates to: LKLHSYSLEDDEAANKSSPFFLL*ITIEFY
Trigger: ATAGAATTCTATCGTGATGCAGAGAAGAAAGAACGG...AGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAGTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CCA 90 bp GAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCTTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ESICLSSHYCGSKTDTTACRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...AGCTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp CTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCATTTTACCAGTTCGAGTTTaGTGCATGAGTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LKVCLGEGCTVLNITAIILPVRV*CMSFFT
Trigger: TGTGAAGAAACTCATGCACCAAACTCGAACTGGTAA...AATGATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
3UTR CAA 72 bp AAGTTAAGTTTCCCTACAGCCATCAGTGGGAAAGGATaGTGGGTACTGACTAATTTTAGGCTTCAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: KLSFPTAISGKG*WVLTNFRLQFQ
Trigger: TTGAAACTGAAGCCTAAAATTAGTCAGTACCCACAATCCTTTCCCACTGATGGCTGTAGGGAAACTTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517933.5
CDS-3UTR TCA 90 bp ATATTAAAACTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTTCGAGTTTGGTGCATaGGTTTCTTCACATTTCATT +
Preference number: 4 (lower is better)
Translates to: ILKLHSYSLEDDEAANKSFEFGA*VSSHFI
Trigger: AATGAAATGTGAAGAAACTCATGCACCAAACTCGAA...GCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAGTTTTAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CCA 90 bp AGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCATACCCAGTTCGAGTTTaGTGCATGAGTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: SLYLFTSYSSFKTQWKSSYPVRV*CMSFFT
Trigger: TGTGAAGAAACTCATGCACCAAACTCGAACTGGGTA...TGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303759.3
ENST00000396723.9
CDS-3UTR CCA 90 bp GCAAATAGAAATCTTACTTCTAAGGGAATCCATTTGTCTTTCTTCCCATTACTGTGCCGTAGGCATAAATaGCTTCACTCCGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ANRNLTSKGIHLSFFPLLCRRHK*LHSVLS
Trigger: AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCA...CAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGAAGTAAGATTTCTATTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp TTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGAAATCTTTCAAAACCCAGTaGAAAAGCTCAATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: FQLLLPHTLAHNISFPWKSFKTQ*KSSISH
Trigger: ATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGA...TTTCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp ATTCAGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGACAATCAAGGTCATGTaGCTTAGAAACCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: IQSLLVHIILFFQNPVEKTIKVM*LRNLSL
Trigger: CAAGCTCAGGTTTCTAAGCCACATGACCTTGATTGT...CTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp GCAAATAGAAATCTTACTTCTAAGGGAATCCATTTGTCTTTCTTCCCATTACTGACAATCAAGGTCATGTaGCTTAGAAACCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: ANRNLTSKGIHLSFFPLLTIKVM*LRNLSL
Trigger: CAAGCTCAGGTTTCTAAGCCACATGACCTTGATTGT...CAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGAAGTAAGATTTCTATTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
CDS-3UTR GCA 90 bp ATTCAGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCCAGTTCGAGTTTGGTaGATGAGTTTCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: IQSLLVHIILFFQNPVEKPVRVW*MSFFTF
Trigger: AAATGTGAAGAAACTCATGCACCAAACTCGAACTGG...CTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CCA 90 bp ACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAATTTCTCATGTAGCCTCTTTCAAAACCCAGTaGAAAAGCTCAATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TSYSSFKTQWKSSISHVASFKTQ*KSSISH
Trigger: ATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGA...GGCTACATGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS CCA 90 bp GCGGGAGGAAGAGCAACGGGAAGAGGTCCGCGCTGCGGCGAAGCCTaGCGGGAGCGCCTCCGCGCCGCAGAAGTGCATTCGGGCCCCGCT +
Preference number: 5 (lower is better)
Translates to: AGGRATGRGPRCGEA*RERLRAAEVHSGPA
Trigger: AGCGGGGCCCGAATGCACTTCTGCGGCGCGGAGGCGCTCCCGCCAGGCTTCGCCGCAGCGCGGACCTCTTCCCGTTGCTCTTCCTCCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517636.5
ENST00000522166.1
CDS GCA 90 bp CAGACCCGTGTGGCGGGAGGAAGAGCAACGGGAAGAGGTCCGCGCTaGGGCGAAGCCTGGCGGGAGCGCCTCCGCGCCGCAGAAGTGCAT +
Preference number: 5 (lower is better)
Translates to: QTRVAGGRATGRGPR*GEAWRERLRAAEVH
Trigger: ATGCACTTCTGCGGCGCGGAGGCGCTCCCGCCAGGCTTCGCCGCAGCGCGGACCTCTTCCCGTTGCTCTTCCTCCCGCCACACGGGTCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517636.5
ENST00000522166.1
CDS CCA 90 bp TGCAAAGTGGAAGGGGGCAAGAAGTCAAGGGTGGCCTGCCGGAGGTaGGCGCGCAGGGCAAGGAGAAACGAAGGGCGAACCCGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: CKVEGGKKSRVACRR*ARRARRNEGRTRGL
Trigger: GAGGCCTCGGGTTCGCCCTTCGTTTCTCCTTGCCCTGCGCGCCCACCTCCGGCAGGCCACCCTTGACTTCTTGCCCCCTTCCACTTTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS CCA 90 bp GGAAGCTGCACACGCCGTGCCGTTAACCCACTGCCAGGTGCAAAGTaGAAGGGGGCAAGAAGTCAAGGGTGGCCTGCCGGAGGTGGGCGC +
Preference number: 5 (lower is better)
Translates to: GSCTRRAVNPLPGAK*KGARSQGWPAGGGR
Trigger: GCGCCCACCTCCGGCAGGCCACCCTTGACTTCTTGCCCCCTTCCACTTTGCACCTGGCAGTGGGTTAACGGCACGGCGTGTGCAGCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS TCA 90 bp CGCGGTGTAGCCCGTCAGCATCTGATCCTGGACGGCGCGCACAGGTaGACACACCTTGCTGTGCCGAGACCATGCCGAGAGAGACAAGGG +
Preference number: 5 (lower is better)
Translates to: RGVARQHLILDGAHR*THLAVPRPCRERQG
Trigger: CCCTTGTCTCTCTCGGCATGGTCTCGGCACAGCAAGGTGTGTTCACCTGTGCGCGCCGTCCAGGATCAGATGCTGACGGGCTACACCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS GCA 90 bp CCGTCAGCATCTGATCCTGGACGGCGCGCACAGGTGAACACACCTTaGTGTGCCGAGACCATGCCGAGAGAGACAAGGGGCGAGGAAAAC +
Preference number: 5 (lower is better)
Translates to: PSASDPGRRAQVNTP*CAETMPRETRGEEN
Trigger: GTTTTCCTCGCCCCTTGTCTCTCTCGGCATGGTCTCGGCACAGCAAGGTGTGTTCACCTGTGCGCGCCGTCCAGGATCAGATGCTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS TCA 90 bp CCCTCTCTAAGTAGCTTTGAAAGGGCAGGGGGAAGGAAACGTTTCTaGACACGTTCATGCCCACACGCCCCGTGGTCGGAGCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PSLSSFERAGGRKRF*TRSCPHAPWSEPRQ
Trigger: CTGCCTGGGCTCCGACCACGGGGCGTGTGGGCATGAACGTGTTCAGAAACGTTTCCTTCCCCCTGCCCTTTCAAAGCTACTTAGAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS-3UTR CAA 90 bp CCGTTCTTTCTTCTCTGCATCACGATAGAATTCCAGAATCTCCGGCAGTTTTTGAGCGCGCATCCCAACTaGCTGCCCCCGCTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: PFFLLCITIEFQNLRQFLSAHPN*LPPLPG
Trigger: GCCGGGGAGCGGGGGCAGCAAGTTGGGATGCGCGCT...CAAAAACTGCCGGAGATTCTGGAATTCTATCGTGATGCAGAGAAGAAAGAACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000521831.5
CDS-3UTR CAA 90 bp CCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGAGTCTCATCCCAGTGTaGAGTTCACCTGATGAACCC +
Preference number: 5 (lower is better)
Translates to: PTATYHRHGTESKQKGHGSLIPV*SSPDEP
Trigger: GGGTTCATCAGGTGAACTCAACACTGGGATGAGACT...CCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp AGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGCGAAAGTCCCCTCCTTaGCATGAGTTCCTCGTGTAT +
Preference number: 5 (lower is better)
Translates to: SQQQHTIGMALRASKKDTRKSPP*HEFLVY
Trigger: ATACACGAGGAACTCATGCAAAGGAGGGGACTTTCG...CGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGCAAGGCACTCTAAGTTaGGATTTCCGAAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PTATYHRHGTESKQKGHGQGTLS*DFRKSP
Trigger: AGGGGACTTTCGGAAATCCAAACTTAGAGTGCCTTG...CCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR CAA 90 bp GCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTCTTTCCTTGGAAACATaGCCTTCATCTCAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: ATYHRHGTESKQKGHGVTLSLET*PSSQPH
Trigger: ATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAG...AGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp ACGACGAGGCAGCTAACAAGAGCTCTCAAGGATCTTTCACGGCCAGAATCTCCGATACCCAGTTCGAGTTaGGTGCATGAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: TTRQLTRALKDLSRPESPIPSSS*VHEFLH
Trigger: GTGAAGAAACTCATGCACCAAACTCGAACTGGGTAT...CGGAGATTCTGGCCGTGAAAGATCCTTGAGAGCTCTTGTTAGCTGCCTCGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523532.5
CDS-3UTR CAA 90 bp CAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGGCTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: QQQHTIGMALRASKKDTGLHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...CCCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCTTACCAGTTCGAGTTaGGTGCATGAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: HRHGTESKQKGHGVTSLSLTSSS*VHEFLH
Trigger: GTGAAGAAACTCATGCACCAAACTCGAACTGGTAAG...AGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGCAAGGCACTCTAAGTTaGGATTTCCGAAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: QHSQQQHTIGMALRASKKQGTLS*DFRKSP
Trigger: AGGGGACTTTCGGAAATCCAAACTTAGAGTGCCTTG...CTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGGACACATACCCAGTTCGAGTTaGGTGCATGAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: QPTATYHRHGTESKQKGHIPSSS*VHEFLH
Trigger: GTGAAGAAACTCATGCACCAAACTCGAACTGGGTAT...GTGTCCTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303759.3
ENST00000396723.9
CDS-3UTR CAA 90 bp CACTGTCTCCACTTGAAGAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTCTTTCCTTGGAAACATaGCCTTCATCTCAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: HCLHLKNLRSVWVRGVQSLSLET*PSSQPH
Trigger: ATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAG...AGACTGTACACCCCTCACCCAGACAGACCTTAAGTTCTTCAAGTGGAGACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp TCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCAACAGCAACCTTTCCTTGGAAACATaGCCTTCATCTCAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: SMPPESHANSCHNTANSNLSLET*PSSQPH
Trigger: ATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAG...GTTGCTGTTGGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGAGTCTCATCCCAGTGTaGAGTTCACCTGATGAACCC +
Preference number: 5 (lower is better)
Translates to: PYLTPCLQKVMQTHATTQSLIPV*SSPDEP
Trigger: GGGTTCATCAGGTGAACTCAACACTGGGATGAGACT...CTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS GCA 90 bp CTGTGCTTCAGTAATCTTCCAATTCAATTCCTAGAGATACAGCTTTaGAAAAGTTTAGGAGGCCGAGTCGGGCGGATCACGAGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LCFSNLPIQFLEIQL*KSLGGRVGRITRSG
Trigger: TCCTGACCTCGTGATCCGCCCGACTCGGCCTCCTAAACTTTTGCAAAGCTGTATCTCTAGGAATTGAATTGGAAGATTACTGAAGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS-3UTR CAA 90 bp ACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCACTTGAAGAACAAGGCACTCTAAGTTaGGATTTCCGAAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: TESKQKGHGVTSLSPLEEQGTLS*DFRKSP
Trigger: AGGGGACTTTCGGAAATCCAAACTTAGAGTGCCTTG...TTCTTCAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCAAGGACAAGGCACTCTAAGTTaGGATTTCCGAAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: LHSYSLEDDEAANKSSQGQGTLS*DFRKSP
Trigger: AGGGGACTTTCGGAAATCCAAACTTAGAGTGCCTTG...TCCTTGAGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CAA 90 bp CAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGATACCCAGTTCGAGTTaGGTGCATGAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: QHSQQQHTIGMALRASKKIPSSS*VHEFLH
Trigger: GTGAAGAAACTCATGCACCAAACTCGAACTGGGTAT...CTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303759.3
ENST00000396723.9
CDS-3UTR CAA 90 bp CCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCTTTCCTTGGAAACATaGCCTTCATCTCAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: PYLTPCLQKVMQTHATTQLSLET*PSSQPH
Trigger: ATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAG...CTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCAACCTTACCAGTTCGAGTTaGGTGCATGAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PNSMPPESHANSCHNTANLTSSS*VHEFLH
Trigger: GTGAAGAAACTCATGCACCAAACTCGAACTGGTAAG...GTTGGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CCTTTCCTTGGAAACATTGCCTTCATCTCAGCCCCATTCAGTCTTTACTTGTTCCGAAAGTCCCCTCCTTaGCATGAGTTCCTCGTGTAT +
Preference number: 5 (lower is better)
Translates to: PFLGNIAFISAPFSLYLFRKSPP*HEFLVY
Trigger: ATACACGAGGAACTCATGCAAAGGAGGGGACTTTCG...GAACAAGTAAAGACTGAATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp GATTTCATCTCTTTCTGCTGCCGTAGGCATAAATGGCTTCACTCCGTTCTTTCTCGAAAGTCCCCTCCTTaGCATGAGTTCCTCGTGTAT +
Preference number: 5 (lower is better)
Translates to: DFISFCCRRHKWLHSVLSRKSPP*HEFLVY
Trigger: ATACACGAGGAACTCATGCAAAGGAGGGGACTTTCG...AGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CAA 90 bp CTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCAAGGAATACCCAGTTCGAGTTaGGTGCATGAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: LHSYSLEDDEAANKSSQGIPSSS*VHEFLH
Trigger: GTGAAGAAACTCATGCACCAAACTCGAACTGGGTAT...TCCTTGAGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CAA 90 bp ACAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAACTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: TTQPTATYHRHGTESKQKLHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...TTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR CAA 90 bp ACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCACTTGAAGAACTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: TESKQKGHGVTSLSPLEELHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...TTCTTCAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR CAA 90 bp TTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTCATGCCACAACACAGCCCTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LPNSMPPESHANSCHNTALHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...GGCTGTGTTGTGGCATGAGTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR CAA 90 bp AAACCTGAGCTTGGTTTTAGACTCAGACAGACAGTTCATTGTCGGCAGCCATTATGGTTCCAGCTTCTCTaGCCTCACACTCTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: KPELGFRLRQTVHCRQPLWFQLL*PHTLAH
Trigger: ATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACCA...TAATGGCTGCCGACAATGAACTGTCTGTCTGAGTCTAAAACCAAGCTCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp AGCTCAATTTCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAGTCTCATCCCAGTGTaGAGTTCACCTGATGAACCC +
Preference number: 5 (lower is better)
Translates to: SSISHVALPNSMPPESHASLIPV*SSPDEP
Trigger: GGGTTCATCAGGTGAACTCAACACTGGGATGAGACT...TGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGAAATTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CAGTGGAAAAGCTCAATTTCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCTCATCCCAGTGTaGAGTTCACCTGATGAACCC +
Preference number: 5 (lower is better)
Translates to: QWKSSISHVALPNSMPPESLIPV*SSPDEP
Trigger: GGGTTCATCAGGTGAACTCAACACTGGGATGAGACT...TTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGAAATTGAGCTTTTCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp GGCACTGAGAGCAAGCAAAAAGGACACGGGGTGACTTCACTGTCTCCACTTGAAACCCCAGTCACCACATaGAATAATCGTATTGTGTTT +
Preference number: 5 (lower is better)
Translates to: GTESKQKGHGVTSLSPLETPVTT*NNRIVF
Trigger: AAACACAATACGATTATTCAATGTGGTGACTGGGGT...TTCAAGTGGAGACAGTGAAGTCACCCCGTGTCCTTTTTGCTTGCTCTCAGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS TCA 90 bp ACTGGAATTGAAGAGGAAATGTCAATTTACAGTGAGGAGCGGGGCTaGATTACAACATCGAGTGCTCCGCTAAAGGGGCCTTGTCTATTA +
Preference number: 5 (lower is better)
Translates to: TGIEEEMSIYSEERG*ITTSSAPLKGPCLL
Trigger: TAATAGACAAGGCCCCTTTAGCGGAGCACTCGATGTTGTAATTCAGCCCCGCTCCTCACTGTAAATTGACATTTCCTCTTCAATTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS-3UTR CAA 90 bp TTAAAACTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGAGCTCTCGAAAGTCCCCTCCTTaGCATGAGTTCCTCGTGTAT +
Preference number: 5 (lower is better)
Translates to: LKLHSYSLEDDEAANKSSRKSPP*HEFLVY
Trigger: ATACACGAGGAACTCATGCAAAGGAGGGGACTTTCG...AGAGCTCTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAGTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CAA 90 bp TCAATTTCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAAACTGGTTCCAGCTTCTCTaGCCTCACACTCTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: SISHVALPNSMPPESHANWFQLL*PHTLAH
Trigger: ATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACCA...GTTTGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGAAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp TTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGAAATGGTTCCAGCTTCTCTaGCCTCACACTCTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: FQLLLPHTLAHNISFPWKWFQLL*PHTLAH
Trigger: ATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACCA...TTTCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CAACACAGCCAACAGCAACATACCATCGGCATGGCACTGAGAGCAAGCAAAAAGTCTAAGGGAATCCATTaGTCTTTCTTCCCATTACTG +
Preference number: 5 (lower is better)
Translates to: QHSQQQHTIGMALRASKKSKGIH*SFFPLL
Trigger: CAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGA...CTTTTTGCTTGCTCTCAGTGCCATGCCGATGGTATGTTGCTGTTGGCTGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp ATTTCATCTCTTTCTGCTGCCGTAGGCATAAATGGCTTCACTCCGTTCTTTCTTCAAGGCACTCTAAGTTaGGATTTCCGAAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: ISSLSAAVGINGFTPFFLQGTLS*DFRKSP
Trigger: AGGGGACTTTCGGAAATCCAAACTTAGAGTGCCTTG...AAGAAAGAACGGAGTGAAGCCATTTATGCCTACGGCAGCAGAAAGAGATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000518801.5
ENST00000521524.5
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CAA 90 bp TTGACCCAAGACCAGATGAAGAGAAGGGACAAAAGCAATGTTTTCAAGTACACAAGTCTCATCCCAGTGTaGAGTTCACCTGATGAACCC +
Preference number: 5 (lower is better)
Translates to: LTQDQMKRRDKSNVFKYTSLIPV*SSPDEP
Trigger: GGGTTCATCAGGTGAACTCAACACTGGGATGAGACT...TGTGTACTTGAAAACATTGCTTTTGTCCCTTCTCTTCATCTGGTCTTGGGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp GGATCTGAGGCCCACCACACATTCCTTACCTTCAACTTACCTTTCCAGTCTTCTACCCCAGTCACCACATaGAATAATCGTATTGTGTTT +
Preference number: 5 (lower is better)
Translates to: GSEAHHTFLTFNLPFQSSTPVTT*NNRIVF
Trigger: AAACACAATACGATTATTCAATGTGGTGACTGGGGT...AGAAGACTGGAAAGGTAAGTTGAAGGTAAGGAATGTGTGGTGGGCCTCAGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp TCTCCACTTGAAGAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATCAGACAGACAGTTCATaGTCGGCAGCCATTAAAACA +
Preference number: 5 (lower is better)
Translates to: SPLEELKVCLGEGCTVLNQTDSS*SAAIKT
Trigger: TGTTTTAATGGCTGCCGACAATGAACTGTCTGTCTG...ATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTCTTCAAGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp ACTCCGTTCTTTCTTCTCTGCATCACGATAGAATTCCAGAATCTCCGGCAGTTTCAGACAGACAGTTCATaGTCGGCAGCCATTAAAACA +
Preference number: 5 (lower is better)
Translates to: TPFFLLCITIEFQNLRQFQTDSS*SAAIKT
Trigger: TGTTTTAATGGCTGCCGACAATGAACTGTCTGTCTG...AAACTGCCGGAGATTCTGGAATTCTATCGTGATGCAGAGAAGAAAGAACGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518801.5
CDS-3UTR CAA 90 bp CTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCATTCTTTCCTTGGAAACATaGCCTTCATCTCAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: LKVCLGEGCTVLNITAIILSLET*PSSQPH
Trigger: ATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAG...AATGATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp GGTTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGATCTAAGGGAATCCATTaGTCTTTCTTCCCATTACTG +
Preference number: 5 (lower is better)
Translates to: GSSFSCLTLLLITFPFLGSKGIH*SFFPLL
Trigger: CAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGA...TCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp GAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCCAGACAGACAGTTCATaGTCGGCAGCCATTAAAACA +
Preference number: 5 (lower is better)
Translates to: ELKVCLGEGCTVLNITAIQTDSS*SAAIKT
Trigger: TGTTTTAATGGCTGCCGACAATGAACTGTCTGTCTG...GATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp TTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGAAACAGACAGACAGTTCATaGTCGGCAGCCATTAAAACA +
Preference number: 5 (lower is better)
Translates to: FQLLLPHTLAHNISFPWKQTDSS*SAAIKT
Trigger: TGTTTTAATGGCTGCCGACAATGAACTGTCTGTCTG...TTTCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp TCTATATTAAAACTGCATTCTTATAGCTTAGAGGACGACGAGGCAGCTAACAAGCAAGGCACTCTAAGTTaGGATTTCCGAAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: SILKLHSYSLEDDEAANKQGTLS*DFRKSP
Trigger: AGGGGACTTTCGGAAATCCAAACTTAGAGTGCCTTG...CTTGTTAGCTGCCTCGTCGTCCTCTAAGCTATAAGAATGCAGTTTTAATATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CAA 90 bp CTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAATCATTCTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LKVCLGEGCTVLNITAIILHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...AATGATTGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000521524.5
ENST00000523061.5
ENST00000523975.5
CDS-3UTR CAA 90 bp AGCTCAATTTCTCATGTAGCCTTACCTAACTCCATGCCTCCAGAAAGTCATGCAACCCCAGTCACCACATaGAATAATCGTATTGTGTTT +
Preference number: 5 (lower is better)
Translates to: SSISHVALPNSMPPESHATPVTT*NNRIVF
Trigger: AAACACAATACGATTATTCAATGTGGTGACTGGGGT...TGCATGACTTTCTGGAGGCATGGAGTTAGGTAAGGCTACATGAGAAATTGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS TCA 90 bp ACAAGGCACTCTAAGTTTGGATTTCCGAAAGTCCCCTCCTTTGCATaGGTTCCTCGTGTATTAACTGGAATTGAAGAGGAAATGTCAATT +
Preference number: 5 (lower is better)
Translates to: TRHSKFGFPKVPSFA*VPRVLTGIEEEMSI
Trigger: AATTGACATTTCCTCTTCAATTCCAGTTAATACACGAGGAACTCATGCAAAGGAGGGGACTTTCGGAAATCCAAACTTAGAGTGCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS-3UTR CAA 90 bp GCAAATAGAAATCTTACTTCTAAGGGAATCCATTTGTCTTTCTTCCCATTACTGCGAAAGTCCCCTCCTTaGCATGAGTTCCTCGTGTAT +
Preference number: 5 (lower is better)
Translates to: ANRNLTSKGIHLSFFPLLRKSPP*HEFLVY
Trigger: ATACACGAGGAACTCATGCAAAGGAGGGGACTTTCG...CAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGAAGTAAGATTTCTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp GGGAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: GNPFVFLPITVVQKLILQLHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...CTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp AAACCTGAGCTTGGTTTTAGACTCAGACAGACAGTTCATTGTCGGCAGCCATTACCATTCAGTCTTTACTaGTTCACATCATACTCTTCT +
Preference number: 5 (lower is better)
Translates to: KPELGFRLRQTVHCRQPLPFSLY*FTSYSS
Trigger: AGAAGAGTATGATGTGAACAAGTAAAGACTGAATGG...TAATGGCTGCCGACAATGAACTGTCTGTCTGAGTCTAAAACCAAGCTCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CCTTTCCTTGGAAACATTGCCTTCATCTCAGCCCCATTCAGTCTTTACTTGTTCCCATTCAGTCTTTACTaGTTCACATCATACTCTTCT +
Preference number: 5 (lower is better)
Translates to: PFLGNIAFISAPFSLYLFPFSLY*FTSYSS
Trigger: AGAAGAGTATGATGTGAACAAGTAAAGACTGAATGG...GAACAAGTAAAGACTGAATGGGGCTGAGATGAAGGCAATGTTTCCAAGGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp TCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAATTGGTTCCAGCTTCTCTaGCCTCACACTCTTGCTCAT +
Preference number: 5 (lower is better)
Translates to: SLLVHIILFFQNPVEKLNWFQLL*PHTLAH
Trigger: ATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAACCA...ATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp TTCCAGCTTCTCTTGCCTCACACTCTTGCTCATAACATTTCCTTTCCTTGGAAATCTAAGGGAATCCATTaGTCTTTCTTCCCATTACTG +
Preference number: 5 (lower is better)
Translates to: FQLLLPHTLAHNISFPWKSKGIH*SFFPLL
Trigger: CAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGA...TTTCCAAGGAAAGGAAATGTTATGAGCAAGAGTGTGAGGCAAGAGAAGCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp GAAGAACTTAAGGTCTGTCTGGGTGAGGGGTGTACAGTCTTAAATATTACAGCAACCCCAGTCACCACATaGAATAATCGTATTGTGTTT +
Preference number: 5 (lower is better)
Translates to: EELKVCLGEGCTVLNITATPVTT*NNRIVF
Trigger: AAACACAATACGATTATTCAATGTGGTGACTGGGGT...TGCTGTAATATTTAAGACTGTACACCCCTCACCCAGACAGACCTTAAGTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp AATGTTGATATTGGTATGTACCTTCAAAGGAGTGACATTAAAATTCCAAGCCCTCAAGGCACTCTAAGTTaGGATTTCCGAAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: NVDIGMYLQRSDIKIPSPQGTLS*DFRKSP
Trigger: AGGGGACTTTCGGAAATCCAAACTTAGAGTGCCTTG...AGGGCTTGGAATTTTAATGTCACTCCTTTGAAGGTACATACCAATATCAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523975.5
CDS-3UTR CAA 90 bp CTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAATTTCTCACTTCACTGTCTCCACTaGAAGAACTTAAGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LVHIILFFQNPVEKLNFSLHCLH*KNLRSV
Trigger: GACAGACCTTAAGTTCTTCAAGTGGAGACAGTGAAG...TGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp GAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCTCTTACCAGTTCGAGTTaGGTGCATGAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: ESICLSSHYCGSKTDTTALTSSS*VHEFLH
Trigger: GTGAAGAAACTCATGCACCAAACTCGAACTGGTAAG...AGCTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp ACTCCGTTCTTTCTTCTCTGCATCACGATAGAATTCTATATTAAAACTGCATTCATACCCAGTTCGAGTTaGGTGCATGAGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: TPFFLLCITIEFYIKTAFIPSSS*VHEFLH
Trigger: GTGAAGAAACTCATGCACCAAACTCGAACTGGGTAT...GAATGCAGTTTTAATATAGAATTCTATCGTGATGCAGAGAAGAAAGAACGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
CDS-3UTR CAA 90 bp GGGAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCCATTCAGTCTTTACTaGTTCACATCATACTCTTCT +
Preference number: 5 (lower is better)
Translates to: GNPFVFLPITVVQKLILQPFSLY*FTSYSS
Trigger: AGAAGAGTATGATGTGAACAAGTAAAGACTGAATGG...CTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp AATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCTGTCTAAGGGAATCCATTaGTCTTTCTTCCCATTACTG +
Preference number: 5 (lower is better)
Translates to: NPFVFLPITVVQKLILQLSKGIH*SFFPLL
Trigger: CAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGA...CAGCTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp GAATCCATTTGTCTTTCTTCCCATTACTGTGGTTCAAAAACTGATACTACAGCTTCTAAGGGAATCCATTaGTCTTTCTTCCCATTACTG +
Preference number: 5 (lower is better)
Translates to: ESICLSSHYCGSKTDTTASKGIH*SFFPLL
Trigger: CAGTAATGGGAAGAAAGACAAATGGATTCCCTTAGA...AGCTGTAGTATCAGTTTTTGAACCACAGTAATGGGAAGAAAGACAAATGGATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp AGTCTTTACTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAACCCCAGTCACCACATaGAATAATCGTATTGTGTTT +
Preference number: 5 (lower is better)
Translates to: SLYLFTSYSSFKTQWKSSTPVTT*NNRIVF
Trigger: AAACACAATACGATTATTCAATGTGGTGACTGGGGT...TGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAGTAAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS-3UTR CAA 90 bp CTTGTTCACATCATACTCTTCTTTCAAAACCCAGTGGAAAAGCTCAATTTCTCACCATTCAGTCTTTACTaGTTCACATCATACTCTTCT +
Preference number: 5 (lower is better)
Translates to: LVHIILFFQNPVEKLNFSPFSLY*FTSYSS
Trigger: AGAAGAGTATGATGTGAACAAGTAAAGACTGAATGG...TGAGAAATTGAGCTTTTCCACTGGGTTTTGAAAGAAGAGTATGATGTGAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303759.3
ENST00000355315.8
ENST00000396723.9
ENST00000518801.5
ENST00000523975.5
CDS GCA 72 bp GCGAAGCCTGGCGGGAGCGCCTCCGCGCCGCAGAAGTaGATTCGGGCCCCGCTACGGCCCAAGGGCACCCCT +
Preference number: 6 (lower is better)
Translates to: AKPGGSASAPQK*IRAPLRPKGTP
Trigger: AGGGGTGCCCTTGGGCCGTAGCGGGGCCCGAATGCACTTCTGCGGCGCGGAGGCGCTCCCGCCAGGCTTCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517636.5
ENST00000522166.1
CDS GCA 72 bp GTGGCGGGAGGAAGAGCAACGGGAAGAGGTCCGCGCTaGGGCGAAGCCTGGCGGGAGCGCCTCCGCGCCGCA +
Preference number: 6 (lower is better)
Translates to: VAGGRATGRGPR*GEAWRERLRAA
Trigger: TGCGGCGCGGAGGCGCTCCCGCCAGGCTTCGCCGCAGCGCGGACCTCTTCCCGTTGCTCTTCCTCCCGCCAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517636.5
ENST00000522166.1
CDS CCA 72 bp AGAGCAACGGGAAGAGGTCCGCGCTGCGGCGAAGCCTaGCGGGAGCGCCTCCGCGCCGCAGAAGTGCATTCG +
Preference number: 6 (lower is better)
Translates to: RATGRGPRCGEA*RERLRAAEVHS
Trigger: CGAATGCACTTCTGCGGCGCGGAGGCGCTCCCGCCAGGCTTCGCCGCAGCGCGGACCTCTTCCCGTTGCTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517636.5
ENST00000522166.1
CDS CAA 90 bp GTCAATGGCTCACGCAGCAGGACCTTAAGTAGCGCGCATCCCAACTaGCTGCCCCCGCTCCCCGGCGGCAGCCCGCCCAATCGGCGCGCG +
Preference number: 6 (lower is better)
Translates to: VNGSRSRTLSSAHPN*LPPLPGGSPPNRRA
Trigger: CGCGCGCCGATTGGGCGGGCTGCCGCCGGGGAGCGGGGGCAGCAAGTTGGGATGCGCGCTACTTAAGGTCCTGCTGCGTGAGCCATTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521831.5
CDS CCA 72 bp GTCATCTTCCTCGCCCCCGGAGCGAACAGACCCGTGTaGCGGGAGGAAGAGCAACGGGAAGAGGTCCGCGCT +
Preference number: 6 (lower is better)
Translates to: VIFLAPGANRPV*REEEQREEVRA
Trigger: AGCGCGGACCTCTTCCCGTTGCTCTTCCTCCCGCCACACGGGTCTGTTCGCTCCGGGGGCGAGGAAGATGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517636.5
ENST00000522166.1
CDS TCA 72 bp GCCCGTCAGCATCTGATCCTGGACGGCGCGCACAGGTaGACACACCTTGCTGTGCCGAGACCATGCCGAGAG +
Preference number: 6 (lower is better)
Translates to: ARQHLILDGAHR*THLAVPRPCRE
Trigger: CTCTCGGCATGGTCTCGGCACAGCAAGGTGTGTTCACCTGTGCGCGCCGTCCAGGATCAGATGCTGACGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS GCA 72 bp TCCTGGACGGCGCGCACAGGTGAACACACCTTGCTGTaGCGAGACCATGCCGAGAGAGACAAGGGGCGAGGA +
Preference number: 6 (lower is better)
Translates to: SWTARTGEHTLL*RDHAERDKGRG
Trigger: TCCTCGCCCCTTGTCTCTCTCGGCATGGTCTCGGCACAGCAAGGTGTGTTCACCTGTGCGCGCCGTCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS GCA 72 bp TCTGATCCTGGACGGCGCGCACAGGTGAACACACCTTaGTGTGCCGAGACCATGCCGAGAGAGACAAGGGGC +
Preference number: 6 (lower is better)
Translates to: SDPGRRAQVNTP*CAETMPRETRG
Trigger: GCCCCTTGTCTCTCTCGGCATGGTCTCGGCACAGCAAGGTGTGTTCACCTGTGCGCGCCGTCCAGGATCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS CCA 72 bp ACACGCCGTGCCGTTAACCCACTGCCAGGTGCAAAGTaGAAGGGGGCAAGAAGTCAAGGGTGGCCTGCCGGA +
Preference number: 6 (lower is better)
Translates to: TRRAVNPLPGAK*KGARSQGWPAG
Trigger: TCCGGCAGGCCACCCTTGACTTCTTGCCCCCTTCCACTTTGCACCTGGCAGTGGGTTAACGGCACGGCGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS TCA 72 bp AGTAGCTTTGAAAGGGCAGGGGGAAGGAAACGTTTCTaGACACGTTCATGCCCACACGCCCCGTGGTCGGAG +
Preference number: 6 (lower is better)
Translates to: SSFERAGGRKRF*TRSCPHAPWSE
Trigger: CTCCGACCACGGGGCGTGTGGGCATGAACGTGTTCAGAAACGTTTCCTTCCCCCTGCCCTTTCAAAGCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS TCA 72 bp TCTAAGTTTGGATTTCCGAAAGTCCCCTCCTTTGCATaGGTTCCTCGTGTATTAACTCCGGCCTCCGCTTCG +
Preference number: 6 (lower is better)
Translates to: SKFGFPKVPSFA*VPRVLTPASAS
Trigger: CGAAGCGGAGGCCGGAGTTAATACACGAGGAACTCATGCAAAGGAGGGGACTTTCGGAAATCCAAACTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000303759.3
ENST00000396723.9
ENST00000518169.1
ENST00000518801.5
ENST00000521524.5
ENST00000521982.5
ENST00000523532.5
ENST00000523667.5
ENST00000523975.5
CDS TCA 72 bp GAAGAGGAAATGTCAATTTACAGTGAGGAGCGGGGCTaGATTACAACATCGAGTGCTCCGCTAAAGGGGCCT +
Preference number: 6 (lower is better)
Translates to: EEEMSIYSEERG*ITTSSAPLKGP
Trigger: AGGCCCCTTTAGCGGAGCACTCGATGTTGTAATTCAGCCCCGCTCCTCACTGTAAATTGACATTTCCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS GCA 72 bp CCAAAAATACAAAAATTAGCCTGGTGTCGTGCCGTGTaGCTGTGGTCCCAGCTACTTGGAAGGCTAAGTAAG +
Preference number: 6 (lower is better)
Translates to: PKIQKLAWCRAV*LWSQLLGRLSK
Trigger: CTTACTTAGCCTTCCAAGTAGCTGGGACCACAGGCACACGGCACGACACCAGGCTAATTTTTGTATTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS GCA 72 bp AGTAATCTTCCAATTCAATTCCTAGAGATACAGCTTTaGAAAAGTTTAGGAGGCCGAGTCGGGCGGATCACG +
Preference number: 6 (lower is better)
Translates to: SNLPIQFLEIQL*KSLGGRVGRIT
Trigger: CGTGATCCGCCCGACTCGGCCTCCTAAACTTTTGCAAAGCTGTATCTCTAGGAATTGAATTGGAAGATTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS CCA 72 bp TTTGTATTGCCATGCCTCAACACAAAGGCCATATATTaGATTGAAATGCATCTACTGGCTGGGTGCGGTGTC +
Preference number: 6 (lower is better)
Translates to: FVLPCLNTKAIY*IEMHLLAGCGV
Trigger: GACACCGCACCCAGCCAGTAGATGCATTTCAATCCAATATATGGCCTTTGTGTTGAGGCATGGCAATACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS CAA 72 bp TTCCAGTGGCATCTTCTTTTTAACTATTTCCCTGCGTaGCAGGAAGTCAGGGAATGCTACTGTGCTTCAGTA +
Preference number: 6 (lower is better)
Translates to: FQWHLLFNYFPA*QEVRECYCASV
Trigger: TACTGAAGCACAGTAGCATTCCCTGACTTCCTGCAACGCAGGGAAATAGTTAAAAAGAAGATGCCACTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522166.1
CDS TCA 72 bp TCTAAGTTTGGATTTCCGAAAGTCCCCTCCTTTGCATaGGTTCCTCGTGTATTAACTGGAATTGAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: SKFGFPKVPSFA*VPRVLTGIEEE
Trigger: TTCCTCTTCAATTCCAGTTAATACACGAGGAACTCATGCAAAGGAGGGGACTTTCGGAAATCCAAACTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522166.1