RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHCHD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000159685

Ensembl transcript IDs: ENST00000290913.8, ENST00000503119.5, ENST00000504973.5, ENST00000508789.5, ENST00000510044.1, ENST00000513253.1, ENST00000514908.5, ENST00000515867.1

Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGCAGGCAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTaGTATGCCTTGACCAGGTCCGAGCACAGCAGCACCTCATGCGGG +
Preference number: 1 (lower is better)
Translates to: GGRQGLTLWAALTQR*YALTRSEHSSTSCG
Trigger: CCCGCATGAGGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCTGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR GCA 90 bp CAGGCAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGTATaGCTTGACCAGGTCCGAGCACAGCAGCACCTCATGCGGGCGATC +
Preference number: 1 (lower is better)
Translates to: QARPYLVGGAHAALV*LDQVRAQQHLMRAI
Trigger: GATCGCCCGCATGAGGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR TCA 90 bp AAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTTaGCCAGGTCCGAGCACAGCAGCACCTCATGCGGGCGATCTCGGT +
Preference number: 1 (lower is better)
Translates to: KALPCGRRSRSAGMP*PGPSTAAPHAGDLG
Trigger: ACCGAGATCGCCCGCATGAGGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR CCA 90 bp GGCCCAGCAGGAAACGGCAGGGCACAGTGGCTGTGGTCCCATGATTaGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGGGAATG +
Preference number: 1 (lower is better)
Translates to: GPAGNGRAQWLWSHD*SLLQGSKSLPGQGM
Trigger: CATTCCCTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCACTGTGCCCTGCCGTTTCCTGCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
3UTR TCA 90 bp ATGCGGGCGATCTCGGTAGCAGTGGAGAATCTGGGCCTGCAACCCTaGGCAGACGGGCTCCACCCTGCGGGGCTTTATTGTGCTCTCCAT +
Preference number: 1 (lower is better)
Translates to: MRAISVAVENLGLQP*ADGLHPAGLYCALH
Trigger: ATGGAGAGCACAATAAAGCCCCGCAGGGTGGAGCCCGTCTGCTCAGGGTTGCAGGCCCAGATTCTCCACTGCTACCGAGATCGCCCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR CCA 90 bp CTCCCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCCTaGGGCCAGATGTCCAAGGCGCTCCTGGAAGCAGCCAGGAGAGTG +
Preference number: 1 (lower is better)
Translates to: LPPSLIGQTQQGSSP*GQMSKALLEAARRV
Trigger: CACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
3UTR TCA 90 bp TGTCCAAGGCGCTCCTGGAAGCAGCCAGGAGAGTGTGCAGGTGACTaGGGAAAGCGAAGAATCCCTCCCTTGGCAAATGCAGAGACCTCC +
Preference number: 1 (lower is better)
Translates to: CPRRSWKQPGECAGD*GKRRIPPLANAETS
Trigger: GGAGGTCTCTGCATTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTGCACACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
3UTR TCA 90 bp CAGATGTCCAAGGCGCTCCTGGAAGCAGCCAGGAGAGTGTGCAGGTaGCTGAGGAAAGCGAAGAATCCCTCCCTTGGCAAATGCAGAGAC +
Preference number: 1 (lower is better)
Translates to: QMSKALLEAARRVCR*LRKAKNPSLGKCRD
Trigger: GTCTCTGCATTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTGCACACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
3UTR CCA 90 bp TCTCTGCTCTCCAGCTCCCTGGCCCAAGGCAGGGAGCCAGGCGGCTaGAAGATTGGAGTGATGGAGCCTTTTTATTGGATACCTTTGGAC +
Preference number: 1 (lower is better)
Translates to: SLLSSSLAQGREPGG*KIGVMEPFYWIPLD
Trigger: GTCCAAAGGTATCCAATAAAAAGGCTCCATCACTCCAATCTTCCAGCCGCCTGGCTCCCTGCCTTGGGCCAGGGAGCTGGAGAGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR CCA 90 bp CTCCAGCTCCCTGGCCCAAGGCAGGGAGCCAGGCGGCTGGAAGATTaGAGTGATGGAGCCTTTTTATTGGATACCTTTGGACTTTTGAAT +
Preference number: 1 (lower is better)
Translates to: LQLPGPRQGARRLED*SDGAFLLDTFGLLN
Trigger: ATTCAAAAGTCCAAAGGTATCCAATAAAAAGGCTCCATCACTCCAATCTTCCAGCCGCCTGGCTCCCTGCCTTGGGCCAGGGAGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR GCA 90 bp CGGGGCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCATGGAATTaGTCTGAAGACAGTTTATACATCTCAGCATTCTTCCTCTCAATA +
Preference number: 1 (lower is better)
Translates to: RGFIVLSIFEAASWN*SEDSLYISAFFLSI
Trigger: TATTGAGAGGAAGAATGCTGAGATGTATAAACTGTCTTCAGAGCAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGCCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR CAA 90 bp CAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTaGACCAGGTCCGAGCACAGCAGCACCTCATGCGGGCGATCTCGG +
Preference number: 2 (lower is better)
Translates to: QGLTLWAALTQRWYA*TRSEHSSTSCGRSR
Trigger: CCGAGATCGCCCGCATGAGGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR-3UTR CCA 90 bp AGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTCAAGGCCTTACCTTGTaGGCGGCGCTCACGCAGCGC +
Preference number: 2 (lower is better)
Translates to: RANATGIISLGPDVQGAPQGLTL*AALTQR
Trigger: GCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTG...AGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR-3UTR TCA 90 bp CTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTGGGCCTGCAACCCTaGGCAGACGGGCTCCACCCT +
Preference number: 2 (lower is better)
Translates to: LIGQTQQGSSPWGQMSKALGLQP*ADGLHP
Trigger: AGGGTGGAGCCCGTCTGCTCAGGGTTGCAGGCCCAG...CGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR-3UTR TCA 90 bp GCGGGCGATCTCGGTAGCAGTGGAGAATCTGGGCCTGCAACCCTGAGCAGACGGTGTGCTCTCCATCTTTaGGGCTGCCTCATGGAATTG +
Preference number: 2 (lower is better)
Translates to: AGDLGSSGESGPATLSRRCALHL*GCLMEL
Trigger: CAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACA...CCGTCTGCTCAGGGTTGCAGGCCCAGATTCTCCACTGCTACCGAGATCGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR-3UTR TCA 90 bp AGTGTGCAGGTGACTGAGGAAAGCGAAGAATCCCTCCCTTGGCAAATGCAGAGAAAGGGGCCCGGCCCTTaGAGGTGGGGCCTGACTTTA +
Preference number: 2 (lower is better)
Translates to: SVQVTEESEESLPWQMQRKGPGP*RWGLTL
Trigger: TAAAGTCAGGCCCCACCTTCAAGGGCCGGGCCCCTT...TCTCTGCATTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTGCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508789.5
3UTR-3UTR GCA 90 bp ATGCTAGATAGAGGTACCTCGCCTACCTCCCAAGGCCCTTGGAAACCTGGGAGGTGCGGGGCTTTATTGTaGTCTCCATCTTTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: MLDRGTSPTSQGPWKPGRCGALL*SPSLRL
Trigger: CAGCCTCAAAGATGGAGAGCACAATAAAGCCCCGCA...CCTCCCAGGTTTCCAAGGGCCTTGGGAGGTAGGCGAGGTACCTCTATCTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR-3UTR CCA 90 bp GGCCTGACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGAGGCGGCTGGAAGATTaGAGTGATGGAGCCTTTTTA +
Preference number: 2 (lower is better)
Translates to: GLTLPSLLPPSLIGQTQQRRLED*SDGAFL
Trigger: TAAAAAGGCTCCATCACTCCAATCTTCCAGCCGCCT...CTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGTCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR-3UTR GCA 90 bp ATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCGCTGCCTCATGGAATTaGTCTGAAGACAGTTTATAC +
Preference number: 2 (lower is better)
Translates to: IGQTQQGSSPWGQMSKALAASWN*SEDSLY
Trigger: GTATAAACTGTCTTCAGAGCAATTCCATGAGGCAGC...GAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR TCA 72 bp CCTTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTTaGCCAGGTCCGAGCACAGCAGCACCTCATGCGGGC +
Preference number: 3 (lower is better)
Translates to: PCGRRSRSAGMP*PGPSTAAPHAG
Trigger: GCCCGCATGAGGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR CCA 72 bp CAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTaGTATGCCTTGACCAGGTCCGAGCACAGCAGCACC +
Preference number: 3 (lower is better)
Translates to: QGLTLWAALTQR*YALTRSEHSST
Trigger: GGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR GCA 72 bp CCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGTATaGCTTGACCAGGTCCGAGCACAGCAGCACCTCATG +
Preference number: 3 (lower is better)
Translates to: PYLVGGAHAALV*LDQVRAQQHLM
Trigger: CATGAGGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR CCA 72 bp AGGGGCCCAGCAGGAAACGGCAGGGCACAGTGGCTGTaGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAG +
Preference number: 3 (lower is better)
Translates to: RGPAGNGRAQWL*SHDWSLLQGSK
Trigger: CTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCACTGTGCCCTGCCGTTTCCTGCTGGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
3UTR-3UTR CAA 90 bp AGGCAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTTGACCCCCTGCGGGGCTTTATaGTGCTCTCCATCTTTGAGG +
Preference number: 3 (lower is better)
Translates to: RQGLTLWAALTQRWYALTPCGAL*CSPSLR
Trigger: CCTCAAAGATGGAGAGCACAATAAAGCCCCGCAGGG...GGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR TCA 72 bp ATCTCGGTAGCAGTGGAGAATCTGGGCCTGCAACCCTaGGCAGACGGGCTCCACCCTGCGGGGCTTTATTGT +
Preference number: 3 (lower is better)
Translates to: ISVAVENLGLQP*ADGLHPAGLYC
Trigger: ACAATAAAGCCCCGCAGGGTGGAGCCCGTCTGCTCAGGGTTGCAGGCCCAGATTCTCCACTGCTACCGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR-3UTR CAA 90 bp ACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGGGATCACAGCGCTGGTATGCCTaGACCAGGTCCGAGCACAGC +
Preference number: 3 (lower is better)
Translates to: TLPSLLPPSLIGQTQQGSQRWYA*TRSEHS
Trigger: GCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTG...TGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR TCA 72 bp AAGGCGCTCCTGGAAGCAGCCAGGAGAGTGTGCAGGTaGCTGAGGAAAGCGAAGAATCCCTCCCTTGGCAAA +
Preference number: 3 (lower is better)
Translates to: KALLEAARRVCR*LRKAKNPSLGK
Trigger: TTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTGCACACTCTCCTGGCTGCTTCCAGGAGCGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
3UTR-3UTR CAA 90 bp AAACCTGGGAGGCAGGCAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGATGGAGCCTTTTTATaGGATACCTTTGGACTTTTG +
Preference number: 3 (lower is better)
Translates to: KPGRQARPYLVGGAHAALDGAFL*DTFGLL
Trigger: CAAAAGTCCAAAGGTATCCAATAAAAAGGCTCCATC...CAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCTGCCTCCCAGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR CCA 72 bp CCTGGCCCAAGGCAGGGAGCCAGGCGGCTGGAAGATTaGAGTGATGGAGCCTTTTTATTGGATACCTTTGGA +
Preference number: 3 (lower is better)
Translates to: PGPRQGARRLED*SDGAFLLDTFG
Trigger: TCCAAAGGTATCCAATAAAAAGGCTCCATCACTCCAATCTTCCAGCCGCCTGGCTCCCTGCCTTGGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR TCA 72 bp CCCAAGGCAGGGAGCCAGGCGGCTGGAAGATTGGAGTaGTGGAGCCTTTTTATTGGATACCTTTGGACTTTT +
Preference number: 3 (lower is better)
Translates to: PKAGSQAAGRLE*WSLFIGYLWTF
Trigger: AAAAGTCCAAAGGTATCCAATAAAAAGGCTCCATCACTCCAATCTTCCAGCCGCCTGGCTCCCTGCCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR CCA 72 bp GGCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCATaGAATTGCTCTGAAGACAGTTTATACATCTCAGCA +
Preference number: 3 (lower is better)
Translates to: GFIVLSIFEAAS*NCSEDSLYISA
Trigger: TGCTGAGATGTATAAACTGTCTTCAGAGCAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
3UTR GCA 72 bp ATTGTGCTCTCCATCTTTGAGGCTGCCTCATGGAATTaGTCTGAAGACAGTTTATACATCTCAGCATTCTTC +
Preference number: 3 (lower is better)
Translates to: IVLSIFEAASWN*SEDSLYISAFF
Trigger: GAAGAATGCTGAGATGTATAAACTGTCTTCAGAGCAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR TCA 90 bp CCACAAGGGGCCCGGCCCTTGAAGGTGGGGCCTGACTTTACCCAGCCTGCTCCCCTGGGCCTGCAACCCTaGGCAGACGGGCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: PQGARPLKVGPDFTQPAPLGLQP*ADGLHP
Trigger: AGGGTGGAGCCCGTCTGCTCAGGGTTGCAGGCCCAG...GGGAGCAGGCTGGGTAAAGTCAGGCCCCACCTTCAAGGGCCGGGCCCCTTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR GCA 90 bp CTCTGCCACCCTCCCACCCCTAAGTGCCGAGGGCTAAGAAGTCCCCGGCACCCACTCCCCATGGCGAGATaGCGCAGGGCCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LCHPPTPKCRGLRSPRHPLPMAR*RRAGSH
Trigger: GTGGCTGCCGGCCCTGCGGCATCTCGCCATGGGGAG...TGGGTGCCGGGGACTTCTTAGCCCTCGGCACTTAGGGGTGGGAGGGTGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR CCA 90 bp GTGGGCGGCGCTCACGCAGCGCTGGTATGCCTTGACCAGGTCCGAGCACAGCAGTCTCCGTGCTCCCCATaGCGAGATGCCGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: VGGAHAALVCLDQVRAQQSPCSP*RDAAGP
Trigger: CGGCCCTGCGGCATCTCGCCATGGGGAGCACGGAGA...CTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CCA 90 bp CCACAAGGGGCCCGGCCCTTGAAGGTGGGGCCTGACTTTACCCAGCCTGCTCCCATCCCTGAGGGCTGCTaGCCACCACTGCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: PQGARPLKVGPDFTQPAPIPEGC*PPLLPD
Trigger: GTCGGGGAGCAGTGGTGGCCAGCAGCCCTCAGGGAT...GGGAGCAGGCTGGGTAAAGTCAGGCCCCACCTTCAAGGGCCGGGCCCCTTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR CCA 90 bp TTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTTGACCAGGTCCGAGCACAGCCAAGGCCTTACCTTGTaGGCGGCGCTCACGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LWAALTQRWYALTRSEHSQGLTL*AALTQR
Trigger: GCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTG...GCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp CAAGGGGCCCGGCCCTTGAAGGTGGGGCCTGACTTTACCCAGCCTGCTCCCACCTGGAGAATCTGGGCCTaGAACCCTGAGCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: QGARPLKVGPDFTQPAPTWRIWA*NPEQTG
Trigger: GCCCGTCTGCTCAGGGTTGCAGGCCCAGATTCTCCA...GGTGGGAGCAGGCTGGGTAAAGTCAGGCCCCACCTTCAAGGGCCGGGCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR GCA 90 bp CAAGGGGCCCGGCCCTTGAAGGTGGGGCCTGACTTTACCCAGCCTGCTCCCACCCACGCAGCGCTGGTATaGCTTGACCAGGTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: QGARPLKVGPDFTQPAPTHAALV*LDQVRA
Trigger: TGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTG...GGTGGGAGCAGGCTGGGTAAAGTCAGGCCCCACCTTCAAGGGCCGGGCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR CCA 90 bp CACCCTCCCACCCCTAAGTGCCGAGGGCTAAGAAGTCCCCGGCACCCACAAGGGTGCTGCCTTCGCCCGTaGGCAGGGATGCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: HPPTPKCRGLRSPRHPQGCCLRP*AGMPWS
Trigger: ACTCCAAGGCATCCCTGCCCACGGGCGAAGGCAGCA...CCCTTGTGGGTGCCGGGGACTTCTTAGCCCTCGGCACTTAGGGGTGGGAGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR TCA 90 bp TCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTGGAAGCAGCCAGGAGAGTGTGCTCTGCTCCTCATGGCTaGTGCTGCCTTCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SPWGQMSKALLEAARRVCSAPHG*CCLRPW
Trigger: CCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGA...GCACACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp TTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTTGACCAGGTCCGAGCACAGCCACGCAGCGCTGGTATaGCTTGACCAGGTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: LWAALTQRWYALTRSEHSHAALV*LDQVRA
Trigger: TGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTG...GCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CCA 90 bp CTGGGAGGCAGGCAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGTATCAGGGGGTGGAGAGCTaGGCTCCTTCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: LGGRQGLTLWAALTQRWYQGVES*APSCGS
Trigger: TGAACCGCATGAAGGAGCCCAGCTCTCCACCCCCTG...ATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCTGCCTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CCA 90 bp CCACAAGGGGCCCGGCCCTTGAAGGTGGGGCCTGACTTTACCCAGCCTGCTCCCCCGACCTGGGCAGTGTaGATTCTTTGTGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PQGARPLKVGPDFTQPAPPTWAV*ILCEGL
Trigger: GAGCCCCTCACAAAGAATCCACACTGCCCAGGTCGG...GGGAGCAGGCTGGGTAAAGTCAGGCCCCACCTTCAAGGGCCGGGCCCCTTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR CCA 90 bp CACCCTCCCACCCCTAAGTGCCGAGGGCTAAGAAGTCCCCGGCACCCACAAGGGTGGGCAGGGATGCCTTaGAGTGCTTGGTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: HPPTPKCRGLRSPRHPQGWAGMP*SAWWQP
Trigger: AGGCTGCCACCAAGCACTCCAAGGCATCCCTGCCCA...CCCTTGTGGGTGCCGGGGACTTCTTAGCCCTCGGCACTTAGGGGTGGGAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR TCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCTGGGCCTGCAACCCTaGGCAGACGGGCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGLGLQP*ADGLHP
Trigger: AGGGTGGAGCCCGTCTGCTCAGGGTTGCAGGCCCAG...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR GCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGCTCCGAAGGACACCCTaGGGCCCTCGCTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQLRRTP*GPRCSP
Trigger: CGGAGAGCAGCGAGGGCCGCAGGGTGTCCTTCGGAG...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR GCA 90 bp CTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGGACAGCCGGACACCCTaGAGCACCCGGACCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LIGQTQQGSSPWGQMSKADSRTP*STRTRS
Trigger: GGAGCGGGTCCGGGTGCTGCAGGGTGTCCGGCTGTC...CGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGGCTGCTGGCCACCACTaGTCCCCGACCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGAAGHH*SPTWAV
Trigger: CACTGCCCAGGTCGGGGAGCAGTGGTGGCCAGCAGC...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp GTGGGGCCTGACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAGCCCGTGGGCAGGGATaGCTTGGAGTGCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VGPDFTQPAPTQPNRANAARGQG*LGVLGG
Trigger: GCCACCAAGCACTCCAAGGCATCCCTGCCCACGGGC...TGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGTCAGGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR CCA 90 bp ACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCTCTCCGTGCTCCCCATaGCGAGATGCCGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: TQPAPTQPNRANATGIISSPCSP*RDAAGP
Trigger: CGGCCCTGCGGCATCTCGCCATGGGGAGCACGGAGA...GGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp AGCACAGCAGCACCTCATGCGGGCGATCTCGGTAGCAGTGGAGAATCTGGGCCTATCCCTGAGGGCTGCTaGCCACCACTGCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: STAAPHAGDLGSSGESGPIPEGC*PPLLPD
Trigger: GTCGGGGAGCAGTGGTGGCCAGCAGCCCTCAGGGAT...AGGCCCAGATTCTCCACTGCTACCGAGATCGCCCGCATGAGGTGCTGCTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CCA 90 bp GGGAGGCAGGCAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCCTTGGAGTGCTTGGTaGCAGCCTCTCTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRQARPYLVGGAHAALVCPWSAW*QPLFPS
Trigger: AGAGGGAAAGAGAGGCTGCCACCAAGCACTCCAAGG...GCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCTGCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR TCA 90 bp GTGGGGCCTGACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAGGCCTGCAGCCGGACTaGCTTCTGCTCCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: VGPDFTQPAPTQPNRANAGLQPD*LLLLMA
Trigger: AGCCATGAGGAGCAGAAGTCAGTCCGGCTGCAGGCC...TGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGTCAGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR GCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCACTCCCCATGGCGAGATaGCGCAGGGCCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYALPMAR*RRAGSH
Trigger: GTGGCTGCCGGCCCTGCGGCATCTCGCCATGGGGAG...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR GCA 90 bp ACGGGCTCCACCCTGCGGGGCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCACCTCGCTGCTCTCCGTaGTCCCCATGGCGAGATGCC +
Preference number: 4 (lower is better)
Translates to: TGSTLRGFIVLSIFEAASPRCSP*SPWRDA
Trigger: GGCATCTCGCCATGGGGAGCACGGAGAGCAGCGAGG...TGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGCCCCGCAGGGTGGAGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGACAGCCGGACACCCTaGAGCACCCGGACCCGCTCC +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYADSRTP*STRTRS
Trigger: GGAGCGGGTCCGGGTGCTGCAGGGTGTCCGGCTGTC...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR GCA 90 bp CAGTGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGCTGCTGGCCACCACTaGTCCCCGACCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QWLWSHDWSLLQGSKSLPAAGHH*SPTWAV
Trigger: CACTGCCCAGGTCGGGGAGCAGTGGTGGCCAGCAGC...TGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp CCTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTGCTGGCCACCACTaGTCCCCGACCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PNRANATGIISLGPDVQGAAGHH*SPTWAV
Trigger: CACTGCCCAGGTCGGGGAGCAGTGGTGGCCAGCAGC...GCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGGCCCGTGGGCAGGGATaGCTTGGAGTGCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGARGQG*LGVLGG
Trigger: GCCACCAAGCACTCCAAGGCATCCCTGCCCACGGGC...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp AGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTTCCAGCTCCCTGGCCTaGAGCCGGACTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: RANATGIISLGPDVQGAPSSSLA*SRTDFC
Trigger: GCAGAAGTCAGTCCGGCTGCAGGCCAGGGAGCTGGA...AGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR CCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGATCCCTGAGGGCTGCTaGCCACCACTGCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQIPEGC*PPLLPD
Trigger: GTCGGGGAGCAGTGGTGGCCAGCAGCCCTCAGGGAT...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGATCCCTGAGGGCTGCTaGCCACCACTGCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGIPEGC*PPLLPD
Trigger: GTCGGGGAGCAGTGGTGGCCAGCAGCCCTCAGGGAT...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp CTGGGAGGCAGGCAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGTATATGCCTTGGAGTGCTTaGTGGCAGCCTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LGGRQGLTLWAALTQRWYMPWSA*WQPLFP
Trigger: GGGAAAGAGAGGCTGCCACCAAGCACTCCAAGGCAT...ATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCTGCCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CCA 90 bp TCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTGGAAGCAGCCAGGAGAGTGTGGGCAGGGATGCCTTaGAGTGCTTGGTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SSPWGQMSKALLEAARRVWAGMP*SAWWQP
Trigger: AGGCTGCCACCAAGCACTCCAAGGCATCCCTGCCCA...CACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp CGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGCTCCTCAGCCCTTGTaGGCGGCGCTCACGCAGCGC +
Preference number: 4 (lower is better)
Translates to: RILCFLNTWQPQAQGHMQAPQPL*AALTQR
Trigger: GCGCTGCGTGAGCGCCGCCCACAAGGGCTGAGGAGC...CTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR TCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGTCTGCTCCTCATGGCTaGTGCTGCCTTCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQSAPHG*CCLRPW
Trigger: CCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGA...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR TCA 90 bp ATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCTCTGCTCCTCATGGCTaGTGCTGCCTTCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: IGQTQQGSSPWGQMSKALSAPHG*CCLRPW
Trigger: CCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGA...GAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR TCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCCTGGCCAGCCGGACTaGCTTCTGCTCCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGPGQPD*LLLLMA
Trigger: AGCCATGAGGAGCAGAAGTCAGTCCGGCTGGCCAGG...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR TCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGCCTGGCCAGCCGGACTaGCTTCTGCTCCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQPGQPD*LLLLMA
Trigger: AGCCATGAGGAGCAGAAGTCAGTCCGGCTGGCCAGG...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR TCA 90 bp CAAGGGGCCCGGCCCTTGAAGGTGGGGCCTGACTTTACCCAGCCTGCTCCCACCTGTGCTCTCCATCTTTaGGGCTGCCTCATGGAATTG +
Preference number: 4 (lower is better)
Translates to: QGARPLKVGPDFTQPAPTCALHL*GCLMEL
Trigger: CAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACA...GGTGGGAGCAGGCTGGGTAAAGTCAGGCCCCACCTTCAAGGGCCGGGCCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR TCA 90 bp GTGGGGCCTGACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAAGCGCTGGTATGCCTTaGCCAGGTCCGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: VGPDFTQPAPTQPNRANASAGMP*PGPSTA
Trigger: TGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCT...TGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGTCAGGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR TCA 90 bp CACCCTCCCACCCCTAAGTGCCGAGGGCTAAGAAGTCCCCGGCACCCACAAGGGGAGTGTGCAGGTGACTaGGGAAAGCGAAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: HPPTPKCRGLRSPRHPQGECAGD*GKRRIP
Trigger: AGGGATTCTTCGCTTTCCTCAGTCACCTGCACACTC...CCCTTGTGGGTGCCGGGGACTTCTTAGCCCTCGGCACTTAGGGGTGGGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR TCA 90 bp CCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGGGCCCGGCCCTTaGAGGTGGGGCCTGACTTTA +
Preference number: 4 (lower is better)
Translates to: PSLIGQTQQGSSPWGQMSKGPGP*RWGLTL
Trigger: TAAAGTCAGGCCCCACCTTCAAGGGCCGGGCCCCTT...GGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR GCA 90 bp ATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCTTCATCCCTGAGGGCTaGTGGCCACCACTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: IGQTQQGSSPWGQMSKALFIPEG*WPPLLP
Trigger: GGGGAGCAGTGGTGGCCAGCAGCCCTCAGGGATGAA...GAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp CCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTTCATCCCTGAGGGCTaGTGGCCACCACTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PPSLIGQTQQGSSPWGQMFIPEG*WPPLLP
Trigger: GGGGAGCAGTGGTGGCCAGCAGCCCTCAGGGATGAA...CATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGTTCATCCCTGAGGGCTaGTGGCCACCACTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGFIPEG*WPPLLP
Trigger: GGGGAGCAGTGGTGGCCAGCAGCCCTCAGGGATGAA...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp GCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTGGATGGAGAATCTGGGCCTaGAACCCTGAGCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: ANATGIISLGPDVQGAPGWRIWA*NPEQTG
Trigger: GCCCGTCTGCTCAGGGTTGCAGGCCCAGATTCTCCA...TCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp AGGCAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTTGACCCACTGCTCCCCGACCTaGGCAGTGTGGATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RQGLTLWAALTQRWYALTHCSPT*AVWILC
Trigger: ACAAAGAATCCACACTGCCCAGGTCGGGGAGCAGTG...GGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CCA 90 bp ACGGGCTCCACCCTGCGGGGCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCAGCGCTCACGCAGCGCTaGTATGCCTTGACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TGSTLRGFIVLSIFEAASALTQR*YALTRS
Trigger: GGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGC...TGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGCCCCGCAGGGTGGAGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CCA 90 bp CCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGGCGCTCACGCAGCGCTaGTATGCCTTGACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPSLIGQTQQGSSPWGQMALTQR*YALTRS
Trigger: GGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGC...CATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCTCCTCAGCCCTTGTaGGCGGCGCTCACGCAGCGC +
Preference number: 4 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYAPQPL*AALTQR
Trigger: GCGCTGCGTGAGCGCCGCCCACAAGGGCTGAGGAGC...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp ATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTGGAAGCAGCCAGGAGAGTACCTCCCAAGGCCCTTaGAAACCTGGGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: IISLGPDVQGAPGSSQESTSQGP*KPGRQA
Trigger: TGCCTGCCTCCCAGGTTTCCAAGGGCCTTGGGAGGT...ACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp CCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCTGCTCTCCAGCTCCCTaGCCTGCAGCCGGACTGACT +
Preference number: 4 (lower is better)
Translates to: PSLIGQTQQGSSPWGQMSCSPAP*PAAGLT
Trigger: AGTCAGTCCGGCTGCAGGCCAGGGAGCTGGAGAGCA...GGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR TCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGAGCGCTGGTATGCCTTaGCCAGGTCCGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGSAGMP*PGPSTA
Trigger: TGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCT...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR TCA 90 bp ATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTTGAAGGTGGGGCCTaGCTTTACCCAGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IGQTQQGSSPWGQMSKALLEGGA*LYPACS
Trigger: GGAGCAGGCTGGGTAAAGTCAGGCCCCACCTTCAAG...GAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR TCA 90 bp CGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGCTGGGCCTGCAACCCTaGGCAGACGGGCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: RILCFLNTWQPQAQGHMQLGLQP*ADGLHL
Trigger: AAGGTGGAGCCCGTCTGCTCAGGGTTGCAGGCCCAG...CTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513253.1
CDS-3UTR GCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCACCTCGCTGCTCTCCGTaGTCCCCATGGCGAGATGCC +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYAPRCSP*SPWRDA
Trigger: GGCATCTCGCCATGGGGAGCACGGAGAGCAGCGAGG...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR GCA 90 bp GGCAGGGAGCCAGGCGGCTGGAAGATTGGAGTGATGGAGCCTTTTTATTGGATAGCTGCTGGCCACCACTaGTCCCCGACCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GREPGGWKIGVMEPFYWIAAGHH*SPTWAV
Trigger: CACTGCCCAGGTCGGGGAGCAGTGGTGGCCAGCAGC...TATCCAATAAAAAGGCTCCATCACTCCAATCTTCCAGCCGCCTGGCTCCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp TCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTGGAAGCAGCCAGGAGAGTGAGGGATGCCTTGGAGTaGTTGGTGGCAGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSPWGQMSKALLEAARRVRDALE*LVAASL
Trigger: AAGAGAGGCTGCCACCAAGCACTCCAAGGCATCCCT...CACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGCCCGTGGGCAGGGATaGCTTGGAGTGCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYAARGQG*LGVLGG
Trigger: GCCACCAAGCACTCCAAGGCATCCCTGCCCACGGGC...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGTGGAGAATCTGGGCCTaGAACCCTGAGCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGWRIWA*NPEQTG
Trigger: GCCCGTCTGCTCAGGGTTGCAGGCCCAGATTCTCCA...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATTCTCCGTGCTCCCCATaGCGAGATGCCGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYSPCSP*RDAAGP
Trigger: CGGCCCTGCGGCATCTCGCCATGGGGAGCACGGAGA...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR CCA 90 bp CCACAAGGGGCCCGGCCCTTGAAGGTGGGGCCTGACTTTACCCAGCCTGCTCCCTCCCTCTTTGCCACCTaGAAGAGCTTATCCTGGATA +
Preference number: 4 (lower is better)
Translates to: PQGARPLKVGPDFTQPAPSLFAT*KSLSWI
Trigger: TATCCAGGATAAGCTCTTCCAGGTGGCAAAGAGGGA...GGGAGCAGGCTGGGTAAAGTCAGGCCCCACCTTCAAGGGCCGGGCCCCTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR CCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGTGGGCAGGGATGCCTTaGAGTGCTTGGTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGWAGMP*SAWWQP
Trigger: AGGCTGCCACCAAGCACTCCAAGGCATCCCTGCCCA...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp ACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCACCTCCCAAGGCCCTTaGAAACCTGGGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TQPAPTQPNRANATGIISTSQGP*KPGRQA
Trigger: TGCCTGCCTCCCAGGTTTCCAAGGGCCTTGGGAGGT...GGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp AGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTTGTCCAAGGCGCTCCTaGAAGCAGCCAGGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: RANATGIISLGPDVQGAPCPRRS*KQPGEC
Trigger: ACACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACA...AGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp CCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGCAGGGATCATCTCCCTaGGGCCAGATGTCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: PPSLIGQTQQGSSPWGQMQGSSP*GQMSKA
Trigger: CGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTG...CATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp AAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTGGAAGCAGGGATCATCTCCCTaGGGCCAGATGTCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: KRNRDHLPGARCPRRSWKQGSSP*GQMSKA
Trigger: CGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTG...CTTCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR TCA 90 bp TCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTGGAAGCAGCCAGGAGAGTGTGCAGTGTGGATTCTTTGTaGGGGGCTCTCAAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SPWGQMSKALLEAARRVCSVDSL*GALKLP
Trigger: TGGCAACTTGAGAGCCCCTCACAAAGAATCCACACT...GCACACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR TCA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGTCTGCTCCTCATGGCTaGTGCTGCCTTCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGSAPHG*CCLRPW
Trigger: CCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGA...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR TCA 90 bp CAGTGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAAGCGCTGGTATGCCTTaGCCAGGTCCGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: QWLWSHDWSLLQGSKSLPSAGMP*PGPSTA
Trigger: TGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCT...TGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp CATCTCAGCATTCTTCCTCTCAATACGCTCCAGCTGCTCCTTGTAGAAGGTGTCCTCCCCATGGCGAGATaGCGCAGGGCCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HLSILPLNTLQLLLVEGVLPMAR*RRAGSH
Trigger: GTGGCTGCCGGCCCTGCGGCATCTCGCCATGGGGAG...GACACCTTCTACAAGGAGCAGCTGGAGCGTATTGAGAGGAAGAATGCTGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp ACTGAGGAAAGCGAAGAATCCCTCCCTTGGCAAATGCAGAGACCTCCAAGTGGACTCCGAAGGACACCCTaGGGCCCTCGCTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: TEESEESLPWQMQRPPSGLRRTP*GPRCSP
Trigger: CGGAGAGCAGCGAGGGCCGCAGGGTGTCCTTCGGAG...TCCACTTGGAGGTCTCTGCATTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp CATCTCAGCATTCTTCCTCTCAATACGCTCCAGCTGCTCCTTGTAGAAGGTGTCGACAGCCGGACACCCTaGAGCACCCGGACCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HLSILPLNTLQLLLVEGVDSRTP*STRTRS
Trigger: GGAGCGGGTCCGGGTGCTGCAGGGTGTCCGGCTGTC...GACACCTTCTACAAGGAGCAGCTGGAGCGTATTGAGAGGAAGAATGCTGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGTTCATCCCTGAGGGCTaGTGGCCACCACTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGFIPEG*WPPLLP
Trigger: GGGGAGCAGTGGTGGCCAGCAGCCCTCAGGGATGAA...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp CAGTGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCATGGAGAATCTGGGCCTaGAACCCTGAGCAGACGGGC +
Preference number: 4 (lower is better)
Translates to: QWLWSHDWSLLQGSKSLPWRIWA*NPEQTG
Trigger: GCCCGTCTGCTCAGGGTTGCAGGCCCAGATTCTCCA...TGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGGCAGGGAATGATGTCTaGTCCTCAGCCCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQAGNDV*SSALVG
Trigger: GCCCACAAGGGCTGAGGAGCAGACATCATTCCCTGC...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGCCGACCTGGGCAGTGTaGATTCTTTGTGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQPTWAV*ILCEGL
Trigger: GAGCCCCTCACAAAGAATCCACACTGCCCAGGTCGG...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR CCA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGTGCTGCCTTCGCCCGTaGGCAGGGATGCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGCCLRP*AGMPWS
Trigger: ACTCCAAGGCATCCCTGCCCACGGGCGAAGGCAGCA...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp CGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGTGCTGCCTTCGCCCGTaGGCAGGGATGCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RILCFLNTWQPQAQGHMQCCLRP*AGMPWS
Trigger: ACTCCAAGGCATCCCTGCCCACGGGCGAAGGCAGCA...CTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGCGCTCACGCAGCGCTaGTATGCCTTGACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYAALTQR*YALTRS
Trigger: GGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGC...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGGCGCTCACGCAGCGCTaGTATGCCTTGACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGALTQR*YALTRS
Trigger: GGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGC...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGTGTTTCCTAAACACGTaGCAGCCCCAGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGCFLNT*QPQAQG
Trigger: CCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACA...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp CAGGTGACTGAGGAAAGCGAAGAATCCCTCCCTTGGCAAATGCAGAGACCTCCACAAGGCCTTACCTTGTaGGCGGCGCTCACGCAGCGC +
Preference number: 4 (lower is better)
Translates to: QVTEESEESLPWQMQRPPQGLTL*AALTQR
Trigger: GCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTG...TGGAGGTCTCTGCATTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp GTGGGGCCTGACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAAGCTGGGCTCCTTCATaGGGTTCACCACGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: VGPDFTQPAPTQPNRANASWAPS*GSPRFQ
Trigger: CTGAAAACGTGGTGAACCGCATGAAGGAGCCCAGCT...TGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGTCAGGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR GCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGAGGGATGCCTTGGAGTaGTTGGTGGCAGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQRDALE*LVAASL
Trigger: AAGAGAGGCTGCCACCAAGCACTCCAAGGCATCCCT...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp CCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGAGGGATGCCTTGGAGTaGTTGGTGGCAGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PPSLIGQTQQGSSPWGQMRDALE*LVAASL
Trigger: AAGAGAGGCTGCCACCAAGCACTCCAAGGCATCCCT...CATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp ACGGGCTCCACCCTGCGGGGCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCAAGCCGGACTGACTTCTaGTCCTCATGGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: TGSTLRGFIVLSIFEAASSRTDF*SSWLML
Trigger: CAGCATCAGCCATGAGGAGCAGAAGTCAGTCCGGCT...TGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGCCCCGCAGGGTGGAGCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp GGCCTGACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGAGCCGGACTGACTTCTaGTCCTCATGGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: GLTLPSLLPPSLIGQTQQSRTDF*SSWLML
Trigger: CAGCATCAGCCATGAGGAGCAGAAGTCAGTCCGGCT...CTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGTCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCACACGCAGCGCTGGTATaGCTTGACCAGGTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYAHAALV*LDQVRA
Trigger: TGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTG...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGAGGCTCAGGGGCATATaGAGGGGCCCAGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGRLRGI*RGPAGN
Trigger: GTTTCCTGCTGGGCCCCTGCATATGCCCCTGAGCCT...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp CGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGAGGCTCAGGGGCATATaGAGGGGCCCAGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: RILCFLNTWQPQAQGHMQRLRGI*RGPAGN
Trigger: GTTTCCTGCTGGGCCCCTGCATATGCCCCTGAGCCT...CTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp ACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCCCCTCCCTTGGCAAATaGAGAGACCTCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: TQPAPTQPNRANATGIISPSLGK*RDLQVE
Trigger: CTCCACTTGGAGGTCTCTGCATTTGCCAAGGGAGGG...GGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp ACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGGGATCACCTCCCACCCCTAAGTaGCGAGGGCTAAGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: TLPSLLPPSLIGQTQQGSPPTPK*RGLRSP
Trigger: GGGACTTCTTAGCCCTCGGCACTTAGGGGTGGGAGG...TGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR CCA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGCAGGGGGTGGAGAGCTaGGCTCCTTCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGQGVES*APSCGS
Trigger: TGAACCGCATGAAGGAGCCCAGCTCTCCACCCCCTG...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR CCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCACTGCTCCCCGACCTaGGCAGTGTGGATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGHCSPT*AVWILC
Trigger: ACAAAGAATCCACACTGCCCAGGTCGGGGAGCAGTG...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR CCA 90 bp AGGCAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTTGACCTCCCTCTTTGCCACCTaGAAGAGCTTATCCTGGATA +
Preference number: 4 (lower is better)
Translates to: RQGLTLWAALTQRWYALTSLFAT*KSLSWI
Trigger: TATCCAGGATAAGCTCTTCCAGGTGGCAAAGAGGGA...GGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGATGCCTTGGAGTGCTTaGTGGCAGCCTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGMPWSA*WQPLFP
Trigger: GGGAAAGAGAGGCTGCCACCAAGCACTCCAAGGCAT...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp TCTCCAATGCTAGATAGAGGTACCTCGCCTACCTCCCAAGGCCCTTGGAAACCTTGCTGCCTTCGCCCGTaGGCAGGGATGCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SPMLDRGTSPTSQGPWKPCCLRP*AGMPWS
Trigger: ACTCCAAGGCATCCCTGCCCACGGGCGAAGGCAGCA...AGGTTTCCAAGGGCCTTGGGAGGTAGGCGAGGTACCTCTATCTAGCATTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CCA 90 bp CAGTGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCATGTTTCCTAAACACGTaGCAGCCCCAGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: QWLWSHDWSLLQGSKSLPCFLNT*QPQAQG
Trigger: CCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACA...TGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp AGGCAAGGCCTTACCTTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTTGACCAGGCGGCTGGAAGATTaGAGTGATGGAGCCTTTTTA +
Preference number: 4 (lower is better)
Translates to: RQGLTLWAALTQRWYALTRRLED*SDGAFL
Trigger: TAAAAAGGCTCCATCACTCCAATCTTCCAGCCGCCT...GGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR TCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGCCTGTTCATACCTCTTaGCACCCTCCTTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQPVHTS*HPPSSL
Trigger: CAGGGATGAAGGAGGGTGTCAAGAGGTATGAACAGG...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR TCA 90 bp ACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCGAGTGTGCAGGTGACTaGGGAAAGCGAAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: TQPAPTQPNRANATGIISECAGD*GKRRIP
Trigger: AGGGATTCTTCGCTTTCCTCAGTCACCTGCACACTC...GGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp ATAGAGGTACCTCGCCTACCTCCCAAGGCCCTTGGAAACCTGGGAGGCAGGCAAAGCTGGGCTCCTTCATaGGGTTCACCACGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: IEVPRLPPKALGNLGGRQSWAPS*GSPRFQ
Trigger: CTGAAAACGTGGTGAACCGCATGAAGGAGCCCAGCT...TTGCCTGCCTCCCAGGTTTCCAAGGGCCTTGGGAGGTAGGCGAGGTACCTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp AAGGTGGGGCCTGACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGAGGGGCTCTCAAGTTaGCATCTTGAAGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KVGPDFTQPAPTQPNRANEGLSS*HLEGQR
Trigger: CCTTTGGCCTTCAAGATGGCAACTTGAGAGCCCCTC...GTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGTCAGGCCCCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR GCA 90 bp CATCTCAGCATTCTTCCTCTCAATACGCTCCAGCTGCTCCTTGTAGAAGGTGTCGCCCGTGGGCAGGGATaGCTTGGAGTGCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: HLSILPLNTLQLLLVEGVARGQG*LGVLGG
Trigger: GCCACCAAGCACTCCAAGGCATCCCTGCCCACGGGC...GACACCTTCTACAAGGAGCAGCTGGAGCGTATTGAGAGGAAGAATGCTGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp CAGTGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAAGCCGGACTGACTTCTaGTCCTCATGGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: QWLWSHDWSLLQGSKSLPSRTDF*SSWLML
Trigger: CAGCATCAGCCATGAGGAGCAGAAGTCAGTCCGGCT...TGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp GCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTGGATGCGGGGCTTTATTGTaGTCTCCATCTTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ANATGIISLGPDVQGAPGCGALL*SPSLRL
Trigger: CAGCCTCAAAGATGGAGAGCACAATAAAGCCCCGCA...TCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATCACGCAGCGCTGGTATaGCTTGACCAGGTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYHAALV*LDQVRA
Trigger: TGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTG...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGGCAGGGAATGATGTCTaGTCCTCAGCCCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGAGNDV*SSALVG
Trigger: GCCCACAAGGGCTGAGGAGCAGACATCATTCCCTGC...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp CTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCCCTCCCTTGGCAAATaGAGAGACCTCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LIGQTQQGSSPWGQMSKAPSLGK*RDLQVE
Trigger: CTCCACTTGGAGGTCTCTGCATTTGCCAAGGGAGGG...CGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATTGGGCAGGGATGCCTTaGAGTGCTTGGTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYWAGMP*SAWWQP
Trigger: AGGCTGCCACCAAGCACTCCAAGGCATCCCTGCCCA...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp CGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGAACGGCAGGGCACAGTaGCTGTGGTCCCATGATTGG +
Preference number: 4 (lower is better)
Translates to: RILCFLNTWQPQAQGHMQNGRAQ*LWSHDW
Trigger: CCAATCATGGGACCACAGCCACTGTGCCCTGCCGTT...CTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAAACGGCAGGGCACAGTaGCTGTGGTCCCATGATTGG +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYANGRAQ*LWSHDW
Trigger: CCAATCATGGGACCACAGCCACTGTGCCCTGCCGTT...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp ACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATGTCCAAGGCGCTCCTaGAAGCAGCCAGGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: TLPSLLPPSLIGQTQQGSCPRRS*KQPGEC
Trigger: ACACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACA...TGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR TCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGAGTGTGGATTCTTTGTaGGGGGCTCTCAAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGSVDSL*GALKLP
Trigger: TGGCAACTTGAGAGCCCCTCACAAAGAATCCACACT...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR TCA 90 bp CCTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCCCTGTTCATACCTCTTaGCACCCTCCTTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: PNRANATGIISLGPDVQGPVHTS*HPPSSL
Trigger: CAGGGATGAAGGAGGGTGTCAAGAGGTATGAACAGG...GCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR TCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGTGTGCTCTCCATCTTTaGGGCTGCCTCATGGAATTG +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQCALHL*GCLMEL
Trigger: CAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACA...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR TCA 90 bp CCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTATTATCAGCCGGACTaGCTTCTGCTCCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: PPSLIGQTQQGSSPWGQMYYQPD*LLLLMA
Trigger: AGCCATGAGGAGCAGAAGTCAGTCCGGCTGATAATA...CATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAAGCCGGACTGACTTCTaGTCCTCATGGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYASRTDF*SSWLML
Trigger: CAGCATCAGCCATGAGGAGCAGAAGTCAGTCCGGCT...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGTGCGGGGCTTTATTGTaGTCTCCATCTTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQCGALL*SPSLRL
Trigger: CAGCCTCAAAGATGGAGAGCACAATAAAGCCCCGCA...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR GCA 90 bp CAAATGCAGAGACCTCCAAGTGGAGCATCTGATTCTAACAGGAAAAGGCAGGCACTGCACTCGGGCCTCTaGCACCCTCCCACCCCTAAG +
Preference number: 4 (lower is better)
Translates to: QMQRPPSGASDSNRKRQALHSGL*HPPTPK
Trigger: CTTAGGGGTGGGAGGGTGGCAGAGGCCCGAGTGCAG...TGCCTGCCTTTTCCTGTTAGAATCAGATGCTCCACTTGGAGGTCTCTGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR CCA 90 bp AGCCAGGAGAGTGTGCAGGTGACTGAGGAAAGCGAAGAATCCCTCCCTTGGCAACCTTGGAGTGCTTGGTaGCAGCCTCTCTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SQESVQVTEESEESLPWQPWSAW*QPLFPS
Trigger: AGAGGGAAAGAGAGGCTGCCACCAAGCACTCCAAGG...TTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTGCACACTCTCCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCACCTTGGAGTGCTTGGTaGCAGCCTCTCTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYAPWSAW*QPLFPS
Trigger: AGAGGGAAAGAGAGGCTGCCACCAAGCACTCCAAGG...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGCTGTGGTCCCATGATTaGTCCCTTCTTCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGLWSHD*SLLQGS
Trigger: GGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp CAGGTGACTGAGGAAAGCGAAGAATCCCTCCCTTGGCAAATGCAGAGACCTCCAAGGGAGCCAGGCGGCTaGAAGATTGGAGTGATGGAG +
Preference number: 4 (lower is better)
Translates to: QVTEESEESLPWQMQRPPREPGG*KIGVME
Trigger: CTCCATCACTCCAATCTTCCAGCCGCCTGGCTCCCT...TGGAGGTCTCTGCATTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR TCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCACCTGTTCATACCTCTTaGCACCCTCCTTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYAPVHTS*HPPSSL
Trigger: CAGGGATGAAGGAGGGTGTCAAGAGGTATGAACAGG...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR TCA 90 bp ATGCTAGATAGAGGTACCTCGCCTACCTCCCAAGGCCCTTGGAAACCTGGGAGGAGGAGAGTGTGCAGGTaGCTGAGGAAAGCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: MLDRGTSPTSQGPWKPGRRRVCR*LRKAKN
Trigger: ATTCTTCGCTTTCCTCAGTCACCTGCACACTCTCCT...CCTCCCAGGTTTCCAAGGGCCTTGGGAGGTAGGCGAGGTACCTCTATCTAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp CAGTTTATACATCTCAGCATTCTTCCTCTCAATACGCTCCAGCTGCTCCTTGTACTCCGAAGGACACCCTaGGGCCCTCGCTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: QFIHLSILPLNTLQLLLVLRRTP*GPRCSP
Trigger: CGGAGAGCAGCGAGGGCCGCAGGGTGTCCTTCGGAG...TACAAGGAGCAGCTGGAGCGTATTGAGAGGAAGAATGCTGAGATGTATAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAAGCTGGGCTCCTTCATaGGGTTCACCACGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYASWAPS*GSPRFQ
Trigger: CTGAAAACGTGGTGAACCGCATGAAGGAGCCCAGCT...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR GCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGAGGGGCTCTCAAGTTaGCATCTTGAAGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYAEGLSS*HLEGQR
Trigger: CCTTTGGCCTTCAAGATGGCAACTTGAGAGCCCCTC...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR GCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGTCCTGGATAGCAGCATaGTCCTGTTCATACCTCTTG +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQSWIAA*SCSYLL
Trigger: CAAGAGGTATGAACAGGAGCATGCTGCTATCCAGGA...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATAGGGATGCCTTGGAGTaGTTGGTGGCAGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYRDALE*LVAASL
Trigger: AAGAGAGGCTGCCACCAAGCACTCCAAGGCATCCCT...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp CTGCGGGGCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCATGGAATTGCTCTCCGACCTGGGCAGTGTaGATTCTTTGTGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LRGFIVLSIFEAASWNCSPTWAV*ILCEGL
Trigger: GAGCCCCTCACAAAGAATCCACACTGCCCAGGTCGG...AGAGCAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGCCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGTCCCTCTTTGCCACCTaGAAGAGCTTATCCTGGATA +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGSLFAT*KSLSWI
Trigger: TATCCAGGATAAGCTCTTCCAGGTGGCAAAGAGGGA...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGTCCCTCTTTGCCACCTaGAAGAGCTTATCCTGGATA +
Preference number: 4 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQSLFAT*KSLSWI
Trigger: TATCCAGGATAAGCTCTTCCAGGTGGCAAAGAGGGA...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATCCTTGGAGTGCTTGGTaGCAGCCTCTCTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYPWSAW*QPLFPS
Trigger: AGAGGGAAAGAGAGGCTGCCACCAAGCACTCCAAGG...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp GTGCAGGTGACTGAGGAAAGCGAAGAATCCCTCCCTTGGCAAATGCAGAGACCTATGCCTTGGAGTGCTTaGTGGCAGCCTCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VQVTEESEESLPWQMQRPMPWSA*WQPLFP
Trigger: GGGAAAGAGAGGCTGCCACCAAGCACTCCAAGGCAT...AGGTCTCTGCATTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp ATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTGGAAGCAGCCAGGAGAGTTTTGAGGCTGCCTCATaGAATTGCTCTGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: IISLGPDVQGAPGSSQESFEAAS*NCSEDS
Trigger: ACTGTCTTCAGAGCAATTCCATGAGGCAGCCTCAAA...ACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATAGGGCACAGTGGCTGTaGTCCCATGATTGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYRAQWL*SHDWSL
Trigger: AAGGGACCAATCATGGGACCACAGCCACTGTGCCCT...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR TCA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCTCAAGTTGCCATCTTaGAGGCCAAAGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGLKLPS*RPKVED
Trigger: ATCTTCTACCTTTGGCCTTCAAGATGGCAACTTGAG...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR TCA 90 bp ATAGAGGTACCTCGCCTACCTCCCAAGGCCCTTGGAAACCTGGGAGGCAGGCAACTCAAGTTGCCATCTTaGAGGCCAAAGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: IEVPRLPPKALGNLGGRQLKLPS*RPKVED
Trigger: ATCTTCTACCTTTGGCCTTCAAGATGGCAACTTGAG...TTGCCTGCCTCCCAGGTTTCCAAGGGCCTTGGGAGGTAGGCGAGGTACCTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR TCA 90 bp ACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGGGATCAAGGAGAGTGTGCAGGTaGCTGAGGAAAGCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TLPSLLPPSLIGQTQQGSRRVCR*LRKAKN
Trigger: ATTCTTCGCTTTCCTCAGTCACCTGCACACTCTCCT...TGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp AGTGTGCAGGTGACTGAGGAAAGCGAAGAATCCCTCCCTTGGCAAATGCAGAGACACTGCTCCCCGACCTaGGCAGTGTGGATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SVQVTEESEESLPWQMQRHCSPT*AVWILC
Trigger: ACAAAGAATCCACACTGCCCAGGTCGGGGAGCAGTG...TCTCTGCATTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTGCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CCA 90 bp CCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCTTTGAGGCTGCCTCATaGAATTGCTCTGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: PSLIGQTQQGSSPWGQMSFEAAS*NCSEDS
Trigger: ACTGTCTTCAGAGCAATTCCATGAGGCAGCCTCAAA...GGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR TCA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATTGTGCTCTCCATCTTTaGGGCTGCCTCATGGAATTG +
Preference number: 4 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYCALHL*GCLMEL
Trigger: CAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACA...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR TCA 90 bp CCCTGCGGGGCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCATGGAATTGCTTGTGCTCTCCATCTTTaGGGCTGCCTCATGGAATTG +
Preference number: 4 (lower is better)
Translates to: PCGALLCSPSLRLPHGIACALHL*GCLMEL
Trigger: CAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACA...AGCAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGCCCCGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp AGTGTGCAGGTGACTGAGGAAAGCGAAGAATCCCTCCCTTGGCAAATGCAGAGAGAGGGGCTCTCAAGTTaGCATCTTGAAGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SVQVTEESEESLPWQMQREGLSS*HLEGQR
Trigger: CCTTTGGCCTTCAAGATGGCAACTTGAGAGCCCCTC...TCTCTGCATTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTGCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR GCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCATCCTGGATAGCAGCATaGTCCTGTTCATACCTCTTG +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYASWIAA*SCSYLL
Trigger: CAAGAGGTATGAACAGGAGCATGCTGCTATCCAGGA...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp CCCTGCGGGGCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCATGGAATTGCTTGCGGGGCTTTATTGTaGTCTCCATCTTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PCGALLCSPSLRLPHGIACGALL*SPSLRL
Trigger: CAGCCTCAAAGATGGAGAGCACAATAAAGCCCCGCA...AGCAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGCCCCGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGCTCCACCTTTATTGTaGTCTCCATCTTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYAAPPLL*SPSLRL
Trigger: CAGCCTCAAAGATGGAGAGCACAATAAAGGTGGAGC...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513253.1
CDS-3UTR TCA 90 bp ACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGGGATCACTCAAGTTGCCATCTTaGAGGCCAAAGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: TLPSLLPPSLIGQTQQGSLKLPS*RPKVED
Trigger: ATCTTCTACCTTTGGCCTTCAAGATGGCAACTTGAG...TGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR TCA 90 bp CAGTTTATACATCTCAGCATTCTTCCTCTCAATACGCTCCAGCTGCTCCTTGTAAGCGCTGGTATGCCTTaGCCAGGTCCGAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: QFIHLSILPLNTLQLLLVSAGMP*PGPSTA
Trigger: TGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCT...TACAAGGAGCAGCTGGAGCGTATTGAGAGGAAGAATGCTGAGATGTATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp TCTCCAATGCTAGATAGAGGTACCTCGCCTACCTCCCAAGGCCCTTGGAAACCTTCCTGGATAGCAGCATaGTCCTGTTCATACCTCTTG +
Preference number: 4 (lower is better)
Translates to: SPMLDRGTSPTSQGPWKPSWIAA*SCSYLL
Trigger: CAAGAGGTATGAACAGGAGCATGCTGCTATCCAGGA...AGGTTTCCAAGGGCCTTGGGAGGTAGGCGAGGTACCTCTATCTAGCATTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp CAGTGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGCTGCCTCATGGAATTaGTCTGAAGACAGTTTATAC +
Preference number: 4 (lower is better)
Translates to: QWLWSHDWSLLQGSKSLPAASWN*SEDSLY
Trigger: GTATAAACTGTCTTCAGAGCAATTCCATGAGGCAGC...TGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGTTTGAGGCTGCCTCATaGAATTGCTCTGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGFEAAS*NCSEDS
Trigger: ACTGTCTTCAGAGCAATTCCATGAGGCAGCCTCAAA...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CCA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCATTTGAGGCTGCCTCATaGAATTGCTCTGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYAFEAAS*NCSEDS
Trigger: ACTGTCTTCAGAGCAATTCCATGAGGCAGCCTCAAA...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp CGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGCTGCCTCATGGAATTaGTCTGAAGACAGTTTATAC +
Preference number: 4 (lower is better)
Translates to: RILCFLNTWQPQAQGHMQAASWN*SEDSLY
Trigger: GTATAAACTGTCTTCAGAGCAATTCCATGAGGCAGC...CTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR GCA 90 bp TCTCCAATGCTAGATAGAGGTACCTCGCCTACCTCCCAAGGCCCTTGGAAACCTGCTGCCTCATGGAATTaGTCTGAAGACAGTTTATAC +
Preference number: 4 (lower is better)
Translates to: SPMLDRGTSPTSQGPWKPAASWN*SEDSLY
Trigger: GTATAAACTGTCTTCAGAGCAATTCCATGAGGCAGC...AGGTTTCCAAGGGCCTTGGGAGGTAGGCGAGGTACCTCTATCTAGCATTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR TCA 90 bp CAGTTTATACATCTCAGCATTCTTCCTCTCAATACGCTCCAGCTGCTCCTTGTACCTGTTCATACCTCTTaGCACCCTCCTTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: QFIHLSILPLNTLQLLLVPVHTS*HPPSSL
Trigger: CAGGGATGAAGGAGGGTGTCAAGAGGTATGAACAGG...TACAAGGAGCAGCTGGAGCGTATTGAGAGGAAGAATGCTGAGATGTATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR GCA 90 bp CAAATGCAGAGACCTCCAAGTGGAGCATCTGATTCTAACAGGAAAAGGCAGGCATCCTGGATAGCAGCATaGTCCTGTTCATACCTCTTG +
Preference number: 4 (lower is better)
Translates to: QMQRPPSGASDSNRKRQASWIAA*SCSYLL
Trigger: CAAGAGGTATGAACAGGAGCATGCTGCTATCCAGGA...TGCCTGCCTTTTCCTGTTAGAATCAGATGCTCCACTTGGAGGTCTCTGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
3UTR CAA 72 bp ATCTGCTTTATTTGTTTTCAGACAGTAGCGCATACTTaGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ICFICFQTVAHT*FPKHVAAPGSG
Trigger: CCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTACTGTCTGAAAACAAATAAAGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS GCA 90 bp CCTCGTCCACTCCGAAGGACACCCTGCGGCCCTCGCTGCTCTCCGTaGTCCCCATGGCGAGATGCCGCAGGGCCGGCAGCCACCAGACCC +
Preference number: 5 (lower is better)
Translates to: PRPLRRTPCGPRCSP*SPWRDAAGPAATRP
Trigger: GGGTCTGGTGGCTGCCGGCCCTGCGGCATCTCGCCATGGGGAGCACGGAGAGCAGCGAGGGCCGCAGGGTGTCCTTCGGAGTGGACGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000514908.5
CDS GCA 90 bp GCAGCACCCGGACCCGCTCCTCCTCGTCCACTCCGAAGGACACCCTaGGGCCCTCGCTGCTCTCCGTGCTCCCCATGGCGAGATGCCGCA +
Preference number: 5 (lower is better)
Translates to: AAPGPAPPRPLRRTP*GPRCSPCSPWRDAA
Trigger: TGCGGCATCTCGCCATGGGGAGCACGGAGAGCAGCGAGGGCCGCAGGGTGTCCTTCGGAGTGGACGAGGAGGAGCGGGTCCGGGTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000514908.5
CDS TCA 90 bp CTCCTCAGCCCTTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTTaGCCAGGTCCGAGCACAGCAGCACCTCATGCGGGCGATCTCGGT +
Preference number: 5 (lower is better)
Translates to: LLSPCGRRSRSAGMP*PGPSTAAPHAGDLG
Trigger: ACCGAGATCGCCCGCATGAGGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGGCTGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290913.8
ENST00000504973.5
ENST00000510044.1
ENST00000513253.1
CDS GCA 90 bp GTCTGCTCCTCAGCCCTTGTGGGCGGCGCTCACGCAGCGCTGGTATaGCTTGACCAGGTCCGAGCACAGCAGCACCTCATGCGGGCGATC +
Preference number: 5 (lower is better)
Translates to: VCSSALVGGAHAALV*LDQVRAQQHLMRAI
Trigger: GATCGCCCGCATGAGGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGGCTGAGGAGCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290913.8
ENST00000504973.5
ENST00000510044.1
ENST00000513253.1
CDS-3UTR CAA 90 bp TTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTTGACCAGGTCCGAGCACAGCAGGCAAGGCCTTACCTaGTGGGCGGCGCTCACGCAG +
Preference number: 5 (lower is better)
Translates to: LWAALTQRWYALTRSEHSRQGLT*WAALTQ
Trigger: CTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCT...GCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS TCA 90 bp CCAGCTCCCTGGCCTGCAGCCGGACTGACTTCTGCTCCTCATGGCTaGTGCTGCCTTCGCCCGTGGGCAGGGATGCCTTGGAGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: PAPWPAAGLTSAPHG*CCLRPWAGMPWSAW
Trigger: CCAAGCACTCCAAGGCATCCCTGCCCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGAAGTCAGTCCGGCTGCAGGCCAGGGAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS-3UTR CAA 90 bp TCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTGGAAGCAGCCAGGAGAGTGTGCCAAGGGGCCCGGCCCTaGAAGGTGGGGCCTGACTTT +
Preference number: 5 (lower is better)
Translates to: SPWGQMSKALLEAARRVCQGARP*KVGPDF
Trigger: AAAGTCAGGCCCCACCTTCAAGGGCCGGGCCCCTTG...GCACACTCTCCTGGCTGCTTCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS GCA 90 bp AGTGGAGAATCTGGGCCTGCAACCCTGAGCAGACGGGCTCCACCCTaGGGGGCCTGGGGCAAGGCGCTGGCTTTGTCACTTTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: SGESGPATLSRRAPP*GAWGKALALSLSTV
Trigger: CACAGTGGAAAGTGACAAAGCCAGCGCCTTGCCCCAGGCCCCGCAGGGTGGAGCCCGTCTGCTCAGGGTTGCAGGCCCAGATTCTCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504973.5
CDS-3UTR CAA 90 bp GTGGGGCCTGACTTTACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAAGGCAAGGCCTTACCTaGTGGGCGGCGCTCACGCAG +
Preference number: 5 (lower is better)
Translates to: VGPDFTQPAPTQPNRANARQGLT*WAALTQ
Trigger: CTGCGTGAGCGCCGCCCACAAGGTAAGGCCTTGCCT...TGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGTAAAGTCAGGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS TCA 90 bp AGCAGCATGCTCCTGTTCATACCTCTTGACACCCTCCTTCATCCCTaGGGGCTGCTGGCCACCACTGCTCCCCGACCTGGGCAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: SSMLLFIPLDTLLHP*GLLATTAPRPGQCG
Trigger: TCCACACTGCCCAGGTCGGGGAGCAGTGGTGGCCAGCAGCCCTCAGGGATGAAGGAGGGTGTCAAGAGGTATGAACAGGAGCATGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000514908.5
CDS GCA 90 bp CTTCTGCTCCTCATGGCTGATGCTGCCTTCGCCCGTGGGCAGGGATaGCTTGGAGTGCTTGGTGGCAGCCTCTCTTTCCCTCTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLLLMADAAFARGQG*LGVLGGSLSFPLCH
Trigger: GTGGCAAAGAGGGAAAGAGAGGCTGCCACCAAGCACTCCAAGGCATCCCTGCCCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000513253.1
ENST00000514908.5
CDS GCA 90 bp CCTTCCCTTCCGTCCATGGCAGGCGCCTGTGTAGCTGTCCATGACTaGACAAACCTCCTGGGTCCAGGGCCGCCACTGGGTTATGAAGTG +
Preference number: 5 (lower is better)
Translates to: PSLPSMAGACVAVHD*TNLLGPGPPLGYEV
Trigger: CACTTCATAACCCAGTGGCGGCCCTGGACCCAGGAGGTTTGTGCAGTCATGGACAGCTACACAGGCGCCTGCCATGGACGGAAGGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515867.1
CDS-3UTR CAA 90 bp ACCCAGCCTGCTCCCACCCAGCCTAATAGGGCAAACGCAACAGGGATCATCTCCCAGCGCTGGTATGCCTaGACCAGGTCCGAGCACAGC +
Preference number: 5 (lower is better)
Translates to: TQPAPTQPNRANATGIISQRWYA*TRSEHS
Trigger: GCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTG...GGAGATGATCCCTGTTGCGTTTGCCCTATTAGGCTGGGTGGGAGCAGGCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CAA 90 bp TGGCTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGCGCTGGTATGCCTaGACCAGGTCCGAGCACAGC +
Preference number: 5 (lower is better)
Translates to: WLWSHDWSLLQGSKSLPGQRWYA*TRSEHS
Trigger: GCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTG...CCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CAA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCATCTGCTCCTCAGCCCTaGTGGGCGGCGCTCACGCAG +
Preference number: 5 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYASAPQP*WAALTQ
Trigger: CTGCGTGAGCGCCGCCCACAAGGGCTGAGGAGCAGA...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS TCA 90 bp CCCCACCCCACAGAGCTGTTGAGAGGATGGCAGGAGAATGGCAGGTaGTGCCCAAGACGGCCCGGTCAGAACATGCTCAGTAACGCAGTG +
Preference number: 5 (lower is better)
Translates to: PHPTELLRGWQENGR*CPRRPGQNMLSNAV
Trigger: CACTGCGTTACTGAGCATGTTCTGACCGGGCCGTCTTGGGCATCACCTGCCATTCTCCTGCCATCCTCTCAACAGCTCTGTGGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504973.5
CDS-3UTR CAA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATTCTGCTCCTCAGCCCTaGTGGGCGGCGCTCACGCAG +
Preference number: 5 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYSAPQP*WAALTQ
Trigger: CTGCGTGAGCGCCGCCCACAAGGGCTGAGGAGCAGA...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CAA 90 bp CCTAATAGGGCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGATGCCTTGGAGTGCTaGGTGGCAGCCTCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: PNRANATGIISLGPDVQGDALEC*VAASLS
Trigger: GGAAAGAGAGGCTGCCACCAAGCACTCCAAGGCATC...GCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGCCCTATTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CAA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATCAGCGCTGGTATGCCTaGACCAGGTCCGAGCACAGC +
Preference number: 5 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYQRWYA*TRSEHS
Trigger: GCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTG...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS TCA 90 bp CATGTCAATGTATTATCAGCCGGACTGACTTCTGCTCCTCATGGCTaGTGCTGCCTTCGCCCGTGGGCAGGGATGCCTTGGAGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: HVNVLSAGLTSAPHG*CCLRPWAGMPWSAW
Trigger: CCAAGCACTCCAAGGCATCCCTGCCCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGAAGTCAGTCCGGCTGATAATACATTGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CAA 90 bp GCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGATGCCTTGGAGTGCTaGGTGGCAGCCTCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: AHTLFPKHVAAPGSGAYADALEC*VAASLS
Trigger: GGAAAGAGAGGCTGCCACCAAGCACTCCAAGGCATC...TGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CAA 90 bp CTGCGGGGCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCATGGAATTGCTCTCAGCGCTGGTATGCCTaGACCAGGTCCGAGCACAGC +
Preference number: 5 (lower is better)
Translates to: LRGFIVLSIFEAASWNCSQRWYA*TRSEHS
Trigger: GCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTG...AGAGCAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGCCCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS GCA 90 bp CAGGGATGCCTTGGAGTGCTTGGTGGCAGCCTCTCTTTCCCTCTTTaGCACCTGGAAGAGCTTATCCTGGATAGCAGCATGCTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: QGCLGVLGGSLSFPL*HLEELILDSSMLLF
Trigger: GAACAGGAGCATGCTGCTATCCAGGATAAGCTCTTCCAGGTGGCAAAGAGGGAAAGAGAGGCTGCCACCAAGCACTCCAAGGCATCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000513253.1
ENST00000514908.5
CDS GCA 90 bp GGCAGGAGAATGGCAGGTGATGCCCAAGACGGCCCGGTCAGAACATaGTCAGTAACGCAGTGTGGCCCTGACATTCAAGGCAGAAATGTT +
Preference number: 5 (lower is better)
Translates to: GRRMAGDAQDGPVRT*SVTQCGPDIQGRNV
Trigger: AACATTTCTGCCTTGAATGTCAGGGCCACACTGCGTTACTGAGCATGTTCTGACCGGGCCGTCTTGGGCATCACCTGCCATTCTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504973.5
CDS-3UTR CAA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGCCCTGCGGGGCTTTATaGTGCTCTCCATCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGPCGAL*CSPSLR
Trigger: CCTCAAAGATGGAGAGCACAATAAAGCCCCGCAGGG...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS GCA 90 bp CCTGACACCCAGCAGCATCCTTTTAACCCTCAAGGAGAAGCACTGTaGTTTCCCGTTCTAGAAATGAGAGGACGGTCGCAGGGTCAAGCC +
Preference number: 5 (lower is better)
Translates to: PDTQQHPFNPQGEAL*FPVLEMRGRSQGQA
Trigger: GGCTTGACCCTGCGACCGTCCTCTCATTTCTAGAACGGGAAAGCACAGTGCTTCTCCTTGAGGGTTAAAAGGATGCTGCTGGGTGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510044.1
CDS-3UTR CAA 90 bp GCAAACGCAACAGGGATCATCTCCCTGGGGCCAGATGTCCAAGGCGCTCCTGGATCTCAAGTTGCCATCTaGAAGGCCAAAGGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: ANATGIISLGPDVQGAPGSQVAI*KAKGRR
Trigger: TCTTCTACCTTTGGCCTTCAAGATGGCAACTTGAGA...TCCAGGAGCGCCTTGGACATCTGGCCCCAGGGAGATGATCCCTGTTGCGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CAA 90 bp CTGTGGTCCCATGATTGGTCCCTTCTTCAGGGCTCCAAGTCACTGCCAGGGCAGTTGTGCTCTCCATCTTaGAGGCTGCCTCATGGAATT +
Preference number: 5 (lower is better)
Translates to: LWSHDWSLLQGSKSLPGQLCSPS*RLPHGI
Trigger: AATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAA...CTGCCCTGGCAGTGACTTGGAGCCCTGAAGAAGGGACCAATCATGGGACCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CAA 90 bp GGCAGGGAGCCAGGCGGCTGGAAGATTGGAGTGATGGAGCCTTTTTATTGGATACCCTGCGGGGCTTTATaGTGCTCTCCATCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: GREPGGWKIGVMEPFYWIPCGAL*CSPSLR
Trigger: CCTCAAAGATGGAGAGCACAATAAAGCCCCGCAGGG...TATCCAATAAAAAGGCTCCATCACTCCAATCTTCCAGCCGCCTGGCTCCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CAA 90 bp GAGAGTGTGCAGGTGACTGAGGAAAGCGAAGAATCCCTCCCTTGGCAAATGCAGCCCTGCGGGGCTTTATaGTGCTCTCCATCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: ESVQVTEESEESLPWQMQPCGAL*CSPSLR
Trigger: CCTCAAAGATGGAGAGCACAATAAAGCCCCGCAGGG...CTGCATTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTGCACACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS GCA 90 bp TGGACTTTTGAATCATGTCAATGTATTATCAGCCGGACTGACTTCTaGTCCTCATGGCTGATGCTGCCTTCGCCCGTGGGCAGGGATGCC +
Preference number: 5 (lower is better)
Translates to: WTFESCQCIISRTDF*SSWLMLPSPVGRDA
Trigger: GGCATCCCTGCCCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGAAGTCAGTCCGGCTGATAATACATTGACATGATTCAAAAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CAA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATCGGGCTCCACCTTTATaGTGCTCTCCATCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYRAPPL*CSPSLR
Trigger: CCTCAAAGATGGAGAGCACAATAAAGGTGGAGCCCG...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513253.1
CDS-3UTR CAA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGTTGTGCTCTCCATCTTaGAGGCTGCCTCATGGAATT +
Preference number: 5 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGLCSPS*RLPHGI
Trigger: AATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAA...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CAA 90 bp AGCACAGCAGCACCTCATGCGGGCGATCTCGGTAGCAGTGGAGAATCTGGGCCTGATGGAGCCTTTTTATaGGATACCTTTGGACTTTTG +
Preference number: 5 (lower is better)
Translates to: STAAPHAGDLGSSGESGPDGAFL*DTFGLL
Trigger: CAAAAGTCCAAAGGTATCCAATAAAAAGGCTCCATC...AGGCCCAGATTCTCCACTGCTACCGAGATCGCCCGCATGAGGTGCTGCTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CAA 90 bp CGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGTCTCAAGTTGCCATCTaGAAGGCCAAAGGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: RILCFLNTWQPQAQGHMQSQVAI*KAKGRR
Trigger: TCTTCTACCTTTGGCCTTCAAGATGGCAACTTGAGA...CTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290913.8
CDS-3UTR CAA 90 bp CAGGTGACTGAGGAAAGCGAAGAATCCCTCCCTTGGCAAATGCAGAGACCTCCATTGTGCTCTCCATCTTaGAGGCTGCCTCATGGAATT +
Preference number: 5 (lower is better)
Translates to: QVTEESEESLPWQMQRPPLCSPS*RLPHGI
Trigger: AATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAA...TGGAGGTCTCTGCATTTGCCAAGGGAGGGATTCTTCGCTTTCCTCAGTCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503119.5
ENST00000508789.5
CDS-3UTR CAA 90 bp ATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATGCAGGGGACAGTAGCGCATACTTaGTTTCCTAAACACGTGGCA +
Preference number: 5 (lower is better)
Translates to: ILCFLNTWQPQAQGHMQGTVAHT*FPKHVA
Trigger: TGCCACGTGTTTAGGAAACAAAGTATGCGCTACTGT...CCCCTGCATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CAA 90 bp GTAGCGCATACTTTGTTTCCTAAACACGTGGCAGCCCCAGGCTCAGGGGCATATACAGTAGCGCATACTTaGTTTCCTAAACACGTGGCA +
Preference number: 5 (lower is better)
Translates to: VAHTLFPKHVAAPGSGAYTVAHT*FPKHVA
Trigger: TGCCACGTGTTTAGGAAACAAAGTATGCGCTACTGT...ATATGCCCCTGAGCCTGGGGCTGCCACGTGTTTAGGAAACAAAGTATGCGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290913.8
ENST00000513253.1
CDS-3UTR CAA 90 bp CATCTCAGCATTCTTCCTCTCAATACGCTCCAGCTGCTCCTTGTAGAAGGTGTCTTGTGCTCTCCATCTTaGAGGCTGCCTCATGGAATT +
Preference number: 5 (lower is better)
Translates to: HLSILPLNTLQLLLVEGVLCSPS*RLPHGI
Trigger: AATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAA...GACACCTTCTACAAGGAGCAGCTGGAGCGTATTGAGAGGAAGAATGCTGAGATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS-3UTR CAA 90 bp CAGTTTATACATCTCAGCATTCTTCCTCTCAATACGCTCCAGCTGCTCCTTGTATCTCAAGTTGCCATCTaGAAGGCCAAAGGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: QFIHLSILPLNTLQLLLVSQVAI*KAKGRR
Trigger: TCTTCTACCTTTGGCCTTCAAGATGGCAACTTGAGA...TACAAGGAGCAGCTGGAGCGTATTGAGAGGAAGAATGCTGAGATGTATAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS GCA 90 bp TCCACCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCATGGAATTaGTCTGAAGACAGTTTATACATCTCAGCATTCTTCCTCTCAATA +
Preference number: 5 (lower is better)
Translates to: STFIVLSIFEAASWN*SEDSLYISAFFLSI
Trigger: TATTGAGAGGAAGAATGCTGAGATGTATAAACTGTCTTCAGAGCAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513253.1
CDS CAA 90 bp GCTCCTCAGCCCTTGTGGGCGGCGCTCACGCAGCGCTGGTATGCCTaGACCAGGTCCGAGCACAGCAGCACCTCATGCGGGCGATCTCGG +
Preference number: 6 (lower is better)
Translates to: APQPLWAALTQRWYA*TRSEHSSTSCGRSR
Trigger: CCGAGATCGCCCGCATGAGGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGGCTGAGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290913.8
ENST00000504973.5
ENST00000510044.1
ENST00000513253.1
CDS CCA 72 bp GCTCCTCAGCCCTTGTGGGCGGCGCTCACGCAGCGCTaGTATGCCTTGACCAGGTCCGAGCACAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: APQPLWAALTQR*YALTRSEHSST
Trigger: GGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGGCTGAGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290913.8
ENST00000504973.5
ENST00000510044.1
ENST00000513253.1
CDS TCA 72 bp ATCTCGGTAGCAGTGGAGAATCTGGGCCTGCAACCCTaGGCAGACGGGCTCCACCCTGCGGGGCCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: ISVAVENLGLQP*ADGLHPAGPPR
Trigger: CCTGGGAGGCCCCGCAGGGTGGAGCCCGTCTGCTCAGGGTTGCAGGCCCAGATTCTCCACTGCTACCGAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510044.1
CDS GCA 72 bp CTCTCCAGCTCCCTGGCCTGCAGCCGGACTGACTTCTaGTCCTCATGGCTGATGCTGCCTTCGCCCGTGGGC +
Preference number: 6 (lower is better)
Translates to: LSSSLACSRTDF*SSWLMLPSPVG
Trigger: GCCCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGAAGTCAGTCCGGCTGCAGGCCAGGGAGCTGGAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS CCA 72 bp GCAACCCTGAGCAGACGGGCTCCACCCTGCGGGGCCTaGGGCAAGGCGCTGGCTTTGTCACTTTCCACTGTG +
Preference number: 6 (lower is better)
Translates to: ATLSRRAPPCGA*GKALALSLSTV
Trigger: CACAGTGGAAAGTGACAAAGCCAGCGCCTTGCCCCAGGCCCCGCAGGGTGGAGCCCGTCTGCTCAGGGTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504973.5
CDS TCA 72 bp TGGCCTGCAGCCGGACTGACTTCTGCTCCTCATGGCTaGTGCTGCCTTCGCCCGTGGGCAGGGATGCCTTGG +
Preference number: 6 (lower is better)
Translates to: WPAAGLTSAPHG*CCLRPWAGMPW
Trigger: CCAAGGCATCCCTGCCCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGAAGTCAGTCCGGCTGCAGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508789.5
CDS GCA 72 bp TCAGCCCTTGTGGGCGGCGCTCACGCAGCGCTGGTATaGCTTGACCAGGTCCGAGCACAGCAGCACCTCATG +
Preference number: 6 (lower is better)
Translates to: SALVGGAHAALV*LDQVRAQQHLM
Trigger: CATGAGGTGCTGCTGTGCTCGGACCTGGTCAAGGCATACCAGCGCTGCGTGAGCGCCGCCCACAAGGGCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290913.8
ENST00000504973.5
ENST00000510044.1
ENST00000513253.1
CDS GCA 72 bp CCGTCCATGGCAGGCGCCTGTGTAGCTGTCCATGACTaGACAAACCTCCTGGGTCCAGGGCCGCCACTGGGT +
Preference number: 6 (lower is better)
Translates to: PSMAGACVAVHD*TNLLGPGPPLG
Trigger: ACCCAGTGGCGGCCCTGGACCCAGGAGGTTTGTGCAGTCATGGACAGCTACACAGGCGCCTGCCATGGACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515867.1
CDS CAA 72 bp CTGCCTTCGCCCGTGGGCAGGGATGCCTTGGAGTGCTaGGTGGCAGCCTCTCTTTCCCTCTTTGCCACCTGG +
Preference number: 6 (lower is better)
Translates to: LPSPVGRDALEC*VAASLSLFATW
Trigger: CCAGGTGGCAAAGAGGGAAAGAGAGGCTGCCACCAAGCACTCCAAGGCATCCCTGCCCACGGGCGAAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000513253.1
ENST00000514908.5
CDS CAA 72 bp GCTCCACCCTGCGGGGCCTGGGGCAAGGCGCTGGCTTaGTCACTTTCCACTGTGTGGTCGGTGCATCAGGTA +
Preference number: 6 (lower is better)
Translates to: APPCGAWGKALA*SLSTVWSVHQV
Trigger: TACCTGATGCACCGACCACACAGTGGAAAGTGACAAAGCCAGCGCCTTGCCCCAGGCCCCGCAGGGTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504973.5
CDS CAA 90 bp TGCTCCTCATGGCTGATGCTGCCTTCGCCCGTGGGCAGGGATGCCTaGGAGTGCTTGGTGGCAGCCTCTCTTTCCCTCTTTGCCACCTGG +
Preference number: 6 (lower is better)
Translates to: CSSWLMLPSPVGRDA*ECLVAASLSLFATW
Trigger: CCAGGTGGCAAAGAGGGAAAGAGAGGCTGCCACCAAGCACTCCAAGGCATCCCTGCCCACGGGCGAAGGCAGCATCAGCCATGAGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000513253.1
ENST00000514908.5
CDS GCA 72 bp CTCATGGCTGATGCTGCCTTCGCCCGTGGGCAGGGATaGCTTGGAGTGCTTGGTGGCAGCCTCTCTTTCCCT +
Preference number: 6 (lower is better)
Translates to: LMADAAFARGQG*LGVLGGSLSFP
Trigger: AGGGAAAGAGAGGCTGCCACCAAGCACTCCAAGGCATCCCTGCCCACGGGCGAAGGCAGCATCAGCCATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000513253.1
ENST00000514908.5
CDS CCA 72 bp TACCTCTTGACACCCTCCTTCATCCCTGAGGGCTGCTaGCCACCACTGCTCCCCGACCTGGGCAGTGTGGAT +
Preference number: 6 (lower is better)
Translates to: YLLTPSFIPEGC*PPLLPDLGSVD
Trigger: ATCCACACTGCCCAGGTCGGGGAGCAGTGGTGGCCAGCAGCCCTCAGGGATGAAGGAGGGTGTCAAGAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000514908.5
CDS CCA 72 bp TGCCTTCGCCCGTGGGCAGGGATGCCTTGGAGTGCTTaGTGGCAGCCTCTCTTTCCCTCTTTGCCACCTGGA +
Preference number: 6 (lower is better)
Translates to: CLRPWAGMPWSA*WQPLFPSLPPG
Trigger: TCCAGGTGGCAAAGAGGGAAAGAGAGGCTGCCACCAAGCACTCCAAGGCATCCCTGCCCACGGGCGAAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000513253.1
ENST00000514908.5
CDS TCA 72 bp GTATTATCAGCCGGACTGACTTCTGCTCCTCATGGCTaGTGCTGCCTTCGCCCGTGGGCAGGGATGCCTTGG +
Preference number: 6 (lower is better)
Translates to: VLSAGLTSAPHG*CCLRPWAGMPW
Trigger: CCAAGGCATCCCTGCCCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGAAGTCAGTCCGGCTGATAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS CCA 72 bp CATCTCAGCATTCTGCCAGTCTCAACAGGTAGAAGGTaGAGGCTGACCAGCTTCCACGGTGGACGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: HLSILPVSTGRR*RLTSFHGGRPQ
Trigger: CTGCGGCCGTCCACCGTGGAAGCTGGTCAGCCTCCACCTTCTACCTGTTGAGACTGGCAGAATGCTGAGATG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515867.1
CDS GCA 72 bp ATGGCAGGTGATGCCCAAGACGGCCCGGTCAGAACATaGTCAGTAACGCAGTGTGGCCCTGACATTCAAGGC +
Preference number: 6 (lower is better)
Translates to: MAGDAQDGPVRT*SVTQCGPDIQG
Trigger: GCCTTGAATGTCAGGGCCACACTGCGTTACTGAGCATGTTCTGACCGGGCCGTCTTGGGCATCACCTGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504973.5
CDS CAA 90 bp CCTGGGCAGTGTGGATTCTTTGTGAGGGGCTCTCAAGTTGCCATCTaGAAGGCCAAAGGTAGAAGATGTGGGAGCAGGGGGTGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: PGQCGFFVRGSQVAI*KAKGRRCGSRGWRA
Trigger: AGCTCTCCACCCCCTGCTCCCACATCTTCTACCTTTGGCCTTCAAGATGGCAACTTGAGAGCCCCTCACAAAGAATCCACACTGCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000514908.5
CDS TCA 72 bp ATCTCGGTAGCAGTGGAGAATCTGGGCCTGCAACCCTaGGCAGACGGGCTCCACCTTTATTGTGCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: ISVAVENLGLQP*ADGLHLYCALH
Trigger: ATGGAGAGCACAATAAAGGTGGAGCCCGTCTGCTCAGGGTTGCAGGCCCAGATTCTCCACTGCTACCGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513253.1
CDS TCA 72 bp CACAAACCTCCTGGGTCCAGGGCCGCCACTGGGTTATaGAGTGTTGCCTGTTTGTGCTTTATTGTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: HKPPGSRAATGL*SVACLCFIVLS
Trigger: GGAGAGCACAATAAAGCACAAACAGGCAACACTTCATAACCCAGTGGCGGCCCTGGACCCAGGAGGTTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515867.1
CDS GCA 72 bp CTTGGAGTGCTTGGTGGCAGCCTCTCTTTCCCTCTTTaGCACCTGGAAGAGCTTATCCTGGATAGCAGCATG +
Preference number: 6 (lower is better)
Translates to: LGVLGGSLSFPL*HLEELILDSSM
Trigger: CATGCTGCTATCCAGGATAAGCTCTTCCAGGTGGCAAAGAGGGAAAGAGAGGCTGCCACCAAGCACTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000513253.1
ENST00000514908.5
CDS GCA 72 bp GAATCATGTCAATGTATTATCAGCCGGACTGACTTCTaGTCCTCATGGCTGATGCTGCCTTCGCCCGTGGGC +
Preference number: 6 (lower is better)
Translates to: ESCQCIISRTDF*SSWLMLPSPVG
Trigger: GCCCACGGGCGAAGGCAGCATCAGCCATGAGGAGCAGAAGTCAGTCCGGCTGATAATACATTGACATGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS CAA 72 bp TGTGGATTCTTTGTGAGGGGCTCTCAAGTTGCCATCTaGAAGGCCAAAGGTAGAAGATGTGGGAGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: CGFFVRGSQVAI*KAKGRRCGSRG
Trigger: CCCCCTGCTCCCACATCTTCTACCTTTGGCCTTCAAGATGGCAACTTGAGAGCCCCTCACAAAGAATCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000514908.5
CDS GCA 72 bp CAGCAGCATCCTTTTAACCCTCAAGGAGAAGCACTGTaGTTTCCCGTTCTAGAAATGAGAGGACGGTCGCAG +
Preference number: 6 (lower is better)
Translates to: QQHPFNPQGEAL*FPVLEMRGRSQ
Trigger: CTGCGACCGTCCTCTCATTTCTAGAACGGGAAAGCACAGTGCTTCTCCTTGAGGGTTAAAAGGATGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510044.1
CDS GCA 72 bp GAGCATCCCAGGTGGCCGGAGACAGCAGGTGATTCGTaGTCACAAGTAAACCTTTATTGTGCTCTCCATCTT +
Preference number: 6 (lower is better)
Translates to: EHPRWPETAGDS*SQVNLYCALHL
Trigger: AAGATGGAGAGCACAATAAAGGTTTACTTGTGAGCACGAATCACCTGCTGTCTCCGGCCACCTGGGATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514908.5
CDS CCA 72 bp ATGACTGCACAAACCTCCTGGGTCCAGGGCCGCCACTaGGTTATGAAGTGTTGCCTGTTTGTGCTTTATTGT +
Preference number: 6 (lower is better)
Translates to: MTAQTSWVQGRH*VMKCCLFVLYC
Trigger: ACAATAAAGCACAAACAGGCAACACTTCATAACCCAGTGGCGGCCCTGGACCCAGGAGGTTTGTGCAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515867.1
CDS GCA 72 bp TTTGCCACCTGGAAGAGCTTATCCTGGATAGCAGCATaGTCCTGTTCATACCTCTTGACACCCTCCTTCATC +
Preference number: 6 (lower is better)
Translates to: FATWKSLSWIAA*SCSYLLTPSFI
Trigger: GATGAAGGAGGGTGTCAAGAGGTATGAACAGGAGCATGCTGCTATCCAGGATAAGCTCTTCCAGGTGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290913.8
ENST00000503119.5
ENST00000508789.5
ENST00000513253.1
ENST00000514908.5
CDS CAA 90 bp CAGGGAGCCAGGCGGCTGGAAGATTGGAGTGATGGAGCCTTTTTATaGGATACCTTTGGACTTTTGAATCATGTCAATGTATTATCAGCC +
Preference number: 6 (lower is better)
Translates to: QGARRLEDWSDGAFL*DTFGLLNHVNVLSA
Trigger: GGCTGATAATACATTGACATGATTCAAAAGTCCAAAGGTATCCAATAAAAAGGCTCCATCACTCCAATCTTCCAGCCGCCTGGCTCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS GCA 72 bp ATTGTGCTCTCCATCTTTGAGGCTGCCTCATGGAATTaGTCTGAAGACAGTTTATACATCTCAGCATTCTGC +
Preference number: 6 (lower is better)
Translates to: IVLSIFEAASWN*SEDSLYISAFC
Trigger: GCAGAATGCTGAGATGTATAAACTGTCTTCAGAGCAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515867.1
CDS CCA 72 bp TGCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCATaGAATTGCTCTGAAGACAGTTTATACATCTCAGCA +
Preference number: 6 (lower is better)
Translates to: CFIVLSIFEAAS*NCSEDSLYISA
Trigger: TGCTGAGATGTATAAACTGTCTTCAGAGCAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515867.1
CDS CCA 72 bp ACCTTTATTGTGCTCTCCATCTTTGAGGCTGCCTCATaGAATTGCTCTGAAGACAGTTTATACATCTCAGCA +
Preference number: 6 (lower is better)
Translates to: TFIVLSIFEAAS*NCSEDSLYISA
Trigger: TGCTGAGATGTATAAACTGTCTTCAGAGCAATTCCATGAGGCAGCCTCAAAGATGGAGAGCACAATAAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513253.1
ENST00000514908.5
CDS CAA 72 bp AGGCGGCTGGAAGATTGGAGTGATGGAGCCTTTTTATaGGATACCTTTGGACTTTTGAATCATGTCAATGTA +
Preference number: 6 (lower is better)
Translates to: RRLEDWSDGAFL*DTFGLLNHVNV
Trigger: TACATTGACATGATTCAAAAGTCCAAAGGTATCCAATAAAAAGGCTCCATCACTCCAATCTTCCAGCCGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS CAA 90 bp GAAGATTGGAGTGATGGAGCCTTTTTATTGGATACCTTTGGACTTTaGAATCATGTCAATGTATTATCAGCCGGACTGACTTCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: EDWSDGAFLLDTFGL*NHVNVLSAGLTSAP
Trigger: AGGAGCAGAAGTCAGTCCGGCTGATAATACATTGACATGATTCAAAAGTCCAAAGGTATCCAATAAAAAGGCTCCATCACTCCAATCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503119.5
CDS CAA 72 bp AGTGATGGAGCCTTTTTATTGGATACCTTTGGACTTTaGAATCATGTCAATGTATTATCAGCCGGACTGACT +
Preference number: 6 (lower is better)
Translates to: SDGAFLLDTFGL*NHVNVLSAGLT
Trigger: AGTCAGTCCGGCTGATAATACATTGACATGATTCAAAAGTCCAAAGGTATCCAATAAAAAGGCTCCATCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503119.5