Pregenerated sensors for CHCHD3 (Homo sapiens)
Ensembl gene IDs: ENSG00000106554Ensembl transcript IDs: ENST00000423635.5, ENST00000481152.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGTCCCATTTTCCCTGTCCAGTGAGTTCCCAACTGTGCTCCAATaGGGACTAAAGGTTCCGAGGAGTAACATCTGGGTTTCTAGGAAG | + |
|
Preference number: 1 (lower is better) Translates to: MVPFSLSSEFPTVLQ*GLKVPRSNIWVSRK Trigger: CTTCCTAGAAACCCAGATGTTACTCCTCGGAACCTTTAGTCCTCATTGGAGCACAGTTGGGAACTCACTGGACAGGGAAAATGGGACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR CCA 90 bp | ACCGGGACCCCAGATTTGTCACTGAAGAAACTGATTCATTACGCATaGACTTCCTTTCATGTTCTCTGTTTGCAGCTGGTCATGGGTTGG | + |
|
Preference number: 1 (lower is better) Translates to: TGTPDLSLKKLIHYA*TSFHVLCLQLVMGW Trigger: CCAACCCATGACCAGCTGCAAACAGAGAACATGAAAGGAAGTCCATGCGTAATGAATCAGTTTCTTCAGTGACAAATCTGGGGTCCCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR GCA 90 bp | TCTTTCTTGGTCTACCACCTCTATTCTGGCTTCACTATTTGCCCATaGAACCGGGACCCCAGATTTGTCACTGAAGAAACTGATTCATTA | + |
|
Preference number: 1 (lower is better) Translates to: SFLVYHLYSGFTICP*NRDPRFVTEETDSL Trigger: TAATGAATCAGTTTCTTCAGTGACAAATCTGGGGTCCCGGTTGCATGGGCAAATAGTGAAGCCAGAATAGAGGTGGTAGACCAAGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR TCA 90 bp | TCAAAACTTACTGTCTTTAATTCTGAAATTATTCCCCTTTCACAATaGCTGACTTTGCTTCCACCTCTCTTATTCCCTTTGTTCCACTCA | + |
|
Preference number: 1 (lower is better) Translates to: SKLTVFNSEIIPLSQ*LTLLPPLLFPLFHS Trigger: TGAGTGGAACAAAGGGAATAAGAGAGGTGGAAGCAAAGTCAGTCATTGTGAAAGGGGAATAATTTCAGAATTAAAGACAGTAAGTTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCATCTGGCTTCACTATTTaGCCATGCAACCGGGACCCC | + |
|
Preference number: 2 (lower is better) Translates to: PLFHSTHVLFLGQLPVSPSGFTI*PCNRDP Trigger: GGGGTCCCGGTTGCATGGGCAAATAGTGAAGCCAGA...TGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCCCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGATTTTCCCTGTCCAGTaGGTTCCCAACTGTGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: IPFVPLNTCTVLRAAASQIFPVQ*VPNCAP Trigger: TGGAGCACAGTTGGGAACTCACTGGACAGGGAAAAT...CTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCAGTTTGCAGCTGGTCATaGGTTGGTCTTTCAGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PLFHSTHVLFLGQLPVSPVCSWS*VGLSEK Trigger: CTTCTCTGAAAGACCAACCCATGACCAGCTGCAAAC...TGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTTCACTATTTGCCCATaGAACCGGGACCCCAGATTT | + |
|
Preference number: 2 (lower is better) Translates to: IPFVPLNTCTVLRAAASQFTICP*NRDPRF Trigger: AAATCTGGGGTCCCGGTTGCATGGGCAAATAGTGAA...CTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCGGGACCCCAGATTTGTCACTGAAGAAACTGATTCATTACGCATGGACTTCCAAGTTCTCCATTCCATaGTCCCATTTTCCCTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: TGTPDLSLKKLIHYAWTSKFSIP*SHFPCP Trigger: TGGACAGGGAAAATGGGACCATGGAATGGAGAACTT...GGAAGTCCATGCGTAATGAATCAGTTTCTTCAGTGACAAATCTGGGGTCCCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCCTCCACTACATCCTTAGCTTCCAAATTTGGAGACTTTAATATACATAGACCCTTTCACAATGACTaGCTTTGCTTCCACCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TSSTTSLASKFGDFNIHRPFHND*LCFHLS Trigger: AGAGAGGTGGAAGCAAAGTCAGTCATTGTGAAAGGG...TCTATGTATATTAAAGTCTCCAAATTTGGAAGCTAAGGATGTAGTGGAGGAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR CAA 90 bp | TGGATGAGACTCATATCGCTTGCAGTGGAAGCTTGGGCAAGTTTCTaGATCTCTCTAAGATGCAAATTTTTCCTCATTTCCTACTGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: WMRLISLAVEAWASF*ISLRCKFFLISYCL Trigger: TAAACAGTAGGAAATGAGGAAAAATTTGCATCTTAGAGAGATCAAGAAACTTGCCCAAGCTTCCACTGCAAGCGATATGAGTCTCATCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| 3UTR-3UTR CCA 90 bp | ACCTCCTCCACTACATCCTTAGCTTCCAAATTTGGAGACTTTAATATACATAGACTGATTCATTACGCATaGACTTCCTTTCATGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: TSSTTSLASKFGDFNIHRLIHYA*TSFHVL Trigger: GAGAACATGAAAGGAAGTCCATGCGTAATGAATCAG...TCTATGTATATTAAAGTCTCCAAATTTGGAAGCTAAGGATGTAGTGGAGGAGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCAGCAGCTGGTCATGGGTaGGTCTTTCAGAGAAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PLFHSTHVLFLGQLPVSPAAGHG*VFQRSD Trigger: GTCACTTCTCTGAAAGACCAACCCATGACCAGCTGC...TGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTTCTGGCTTCACTATTaGCCCATGCAACCGGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: IPFVPLNTCTVLRAAASQFWLHY*PMQPGP Trigger: GGGTCCCGGTTGCATGGGCAAATAGTGAAGCCAGAA...CTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR GCA 72 bp | GGGAGGCAAAGAGAAATGCCAACCAAGGTATTCTTCTaGCCGCTGGAAACTAAGAGTTTTGCTCTCGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: GRQREMPTKVFF*PLETKSFALVP Trigger: AGGTACGAGAGCAAAACTCTTAGTTTCCAGCGGGCAGAAGAATACCTTGGTTGGCATTTCTCTTTGCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCATTTAGTGTTTCCCAATaGCCTAGTGAACTAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PLFHSTHVLFLGQLPVSPFSVSQ*PSELGK Trigger: TTTTCCTAGTTCACTAGGCAATTGGGAAACACTAAA...TGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR CCA 72 bp | TCCTTTCATGTTCTCTGTTTGCAGCTGGTCATGGGTTaGTCTTTCAGAGAAGTGACTAAGGTAAAGAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SFHVLCLQLVMG*SFREVTKVKNG Trigger: CCCATTCTTTACCTTAGTCACTTCTCTGAAAGACCAACCCATGACCAGCTGCAAACAGAGAACATGAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR CCA 72 bp | AAAGAGAAATGCCAACCAAGGTATTCTTCTGCCCGCTaGAAACTAAGAGTTTTGCTCTCGTACCTTCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KEKCQPRYSSAR*KLRVLLSYLPQ Trigger: TTGAGGAAGGTACGAGAGCAAAACTCTTAGTTTCCAGCGGGCAGAAGAATACCTTGGTTGGCATTTCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| 3UTR CCA 72 bp | GACTGGATGAGACTCATATCGCTTGCAGTGGAAGCTTaGGCAAGTTTCTTGATCTCTCTAAGATGCAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: DWMRLISLAVEA*ASFLISLRCKF Trigger: AAATTTGCATCTTAGAGAGATCAAGAAACTTGCCCAAGCTTCCACTGCAAGCGATATGAGTCTCATCCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| 3UTR CCA 72 bp | CCAGATTTGTCACTGAAGAAACTGATTCATTACGCATaGACTTCCTTTCATGTTCTCTGTTTGCAGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: PDLSLKKLIHYA*TSFHVLCLQLV Trigger: GACCAGCTGCAAACAGAGAACATGAAAGGAAGTCCATGCGTAATGAATCAGTTTCTTCAGTGACAAATCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAAGAGAAATGCCAACCAAGGTATTCTTCTGCCCGCTGGAAACTAAGAGTTTCTGGCTTCACTATTTaGCCATGCAACCGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GKEKCQPRYSSARWKLRVSGFTI*PCNRDP Trigger: GGGGTCCCGGTTGCATGGGCAAATAGTGAAGCCAGA...AACTCTTAGTTTCCAGCGGGCAGAAGAATACCTTGGTTGGCATTTCTCTTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR TCA 90 bp | GCACTGAGTAAGCCTTTTAGGTCCCTGCAAATGCCAGTCACAGTTTCACTGGTGTCAGGTTGCCTGAAATaGGGGAGAAGTAACGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSKPFRSLQMPVTVSLVSGCLK*GRSNEF Trigger: GAACTCGTTACTTCTCCCTCATTTCAGGCAACCTGA...CACCAGTGAAACTGTGACTGGCATTTGCAGGGACCTAAAAGGCTTACTCAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS-3UTR TCA 90 bp | CACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCACTGACATTTATTTTCCCTGTCCAGTaGGTTCCCAACTGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSTHVLFLGQLPVSPLTFIFPVQ*VPNCAP Trigger: TGGAGCACAGTTGGGAACTCACTGGACAGGGAAAAT...AAATGTCAGTGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCATCCACTTTTATCAGGTaGTTTGCCTTAGCGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLFHSTHVLFLGQLPVSPSTFIR*FALARS Trigger: GGAACGCGCTAAGGCAAAGCACCTGATAAAAGTGGA...TGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR CCA 90 bp | ACACAGTGTCTGGCACTGAGTAAGCCTTTTAGGTCCCTGCAAATGCCAGTCACACAGTCACAGTTTCACTaGTGCTCAGGTTGCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQCLALSKPFRSLQMPVTQSQFH*CSGCLK Trigger: TTTCAGGCAACCTGAGCACCAGTGAAACTGTGACTG...TGTGACTGGCATTTGCAGGGACCTAAAAGGCTTACTCAGTGCCAGACACTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS-3UTR CCA 90 bp | CCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCACTGACATTGTTTGCAGCTGGTCATaGGTTGGTCTTTCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLNTCTVLRAAASQSTDIVCSWS*VGLSEK Trigger: CTTCTCTGAAAGACCAACCCATGACCAGCTGCAAAC...AATGTCAGTGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR TCA 90 bp | CACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCACTGACATTTCCCTTTCACAATGACTaGCTTTGCTTCCACCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSTHVLFLGQLPVSPLTFPFHND*LCFHLS Trigger: AGAGAGGTGGAAGCAAAGTCAGTCATTGTGAAAGGG...AAATGTCAGTGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCAATTCCCCTTTCACAATaGCTGACTTTGCTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PLFHSTHVLFLGQLPVSPIPLSQ*LTLLPP Trigger: AGGTGGAAGCAAAGTCAGTCATTGTGAAAGGGGAAT...TGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR GCA 90 bp | AAGATTAGTAAGATAACGTTTAAGCTCTCCACACAGTGTCTGGCACTGAGTAAGAGCTGCCTAGCCAGGTaGTTTGCCTTAGCGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KISKITFKLSTQCLALSKSCLAR*FALARS Trigger: GGAACGCGCTAAGGCAAAGCACCTGGCTAGGCAGCT...CTTACTCAGTGCCAGACACTGTGTGGAGAGCTTAAACGTTATCTTACTAATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS-3UTR GCA 90 bp | TTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCACTTTCACTATTTGCCCATaGAACCGGGACCCCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FVPLNTCTVLRAAASQSTFTICP*NRDPRF Trigger: AAATCTGGGGTCCCGGTTGCATGGGCAAATAGTGAA...AGTGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCACTCAGCTGGTCATGGGTTaGTCTTTCAGAGAAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: FVPLNTCTVLRAAASQSTQLVMG*SFREVT Trigger: AGTCACTTCTCTGAAAGACCAACCCATGACCAGCTG...AGTGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR TCA 90 bp | ATCGCTTGCAGTGGAAGCTTGGGCAAGTTTCTTGATCTCTCTAAGATGCAAATTGGTGCTCAGGTTGCCTaGAATGAGGGAGAAGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: IACSGSLGKFLDLSKMQIGAQVA*NEGEVT Trigger: CGTTACTTCTCCCTCATTTCAGGCAACCTGAGCACC...AATTTGCATCTTAGAGAGATCAAGAAACTTGCCCAAGCTTCCACTGCAAGCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS-3UTR GCA 90 bp | ATTCCCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTTCATGTTCTCTGTTTaGAGCTGGTCATGGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IPFVPLNTCTVLRAAASQFMFSV*SWSWVG Trigger: ACCAACCCATGACCAGCTGCAAACAGAGAACATGAA...CTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR GCA 90 bp | ATTCCCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGACCAAGGTATTCTTCTaGCCGCTGGAAACTAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPFVPLNTCTVLRAAASQTKVFF*PLETKS Trigger: ACTCTTAGTTTCCAGCGGGCAGAAGAATACCTTGGT...CTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR CCA 90 bp | CACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCACTGACATTTTTCTCTGTTTGCAGCTaGTCATGGGTTGGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSTHVLFLGQLPVSPLTFFSVCS*SWVGLS Trigger: TGAAAGACCAACCCATGACCAGCTGCAAACAGAGAA...AAATGTCAGTGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR TCA 90 bp | ACACAGTGTCTGGCACTGAGTAAGCCTTTTAGGTCCCTGCAAATGCCAGTCACATCATTTCACCAAACTTaGACTTTGCTTCCACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQCLALSKPFRSLQMPVTSFHQT*TLLPPL Trigger: AAGAGGTGGAAGCAAAGTTCAAGTTTGGTGAAATGA...TGTGACTGGCATTTGCAGGGACCTAAAAGGCTTACTCAGTGCCAGACACTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS-3UTR GCA 90 bp | GGCAAAGAGAAATGCCAACCAAGGTATTCTTCTGCCCGCTGGAAACTAAGAGTTGGAGGCAAAGAGAAATaGCAACCAAGGTATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKEKCQPRYSSARWKLRVGGKEK*QPRYSS Trigger: AGAAGAATACCTTGGTTGGCATTTCTCTTTGCCTCC...AACTCTTAGTTTCCAGCGGGCAGAAGAATACCTTGGTTGGCATTTCTCTTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR CCA 90 bp | AAGATAACGTTTAAGCTCTCCACACAGTGTCTGGCACTGAGTAAGCCTTTTAGGCTTGCAGTGGAAGCTTaGGCAAGTTTCTTGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KITFKLSTQCLALSKPFRLAVEA*ASFLIS Trigger: AGAGATCAAGAAACTTGCCCAAGCTTCCACTGCAAG...CCTAAAAGGCTTACTCAGTGCCAGACACTGTGTGGAGAGCTTAAACGTTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGAGAAATGCCAACCAAGGTATTCTTCTGCCCGCTGGAAACTAAGAGTTTATTCTTCTGCCCGCTaGAAACTAAGAGTTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKEKCQPRYSSARWKLRVYSSAR*KLRVLL Trigger: GAGCAAAACTCTTAGTTTCCAGCGGGCAGAAGAATA...AACTCTTAGTTTCCAGCGGGCAGAAGAATACCTTGGTTGGCATTTCTCTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR GCA 90 bp | ATCGCTTGCAGTGGAAGCTTGGGCAAGTTTCTTGATCTCTCTAAGATGCAAATTAGCCTTTTAGGTCCCTaGAAATGCCAGTCACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IACSGSLGKFLDLSKMQISLLGP*KCQSQF Trigger: AAACTGTGACTGGCATTTGCAGGGACCTAAAAGGCT...AATTTGCATCTTAGAGAGATCAAGAAACTTGCCCAAGCTTCCACTGCAAGCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGAGAAATGCCAACCAAGGTATTCTTCTGCCCGCTGGAAACTAAGAGTTCTGATTCATTACGCATaGACTTCCTTTCATGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKEKCQPRYSSARWKLRVLIHYA*TSFHVL Trigger: GAGAACATGAAAGGAAGTCCATGCGTAATGAATCAG...AACTCTTAGTTTCCAGCGGGCAGAAGAATACCTTGGTTGGCATTTCTCTTTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR TCA 90 bp | ATCGCTTGCAGTGGAAGCTTGGGCAAGTTTCTTGATCTCTCTAAGATGCAAATTCGTATACATGTTCTGTaGCTCCAAAAAGTTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IACSGSLGKFLDLSKMQIRIHVL*LQKVAA Trigger: AGCAGCAACTTTTTGGAGTCACAGAACATGTATACG...AATTTGCATCTTAGAGAGATCAAGAAACTTGCCCAAGCTTCCACTGCAAGCGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS-3UTR GCA 90 bp | ATTGTTGTGAAGATTAGTAAGATAACGTTTAAGCTCTCCACACAGTGTCTGGCATTAGGTCCCTGCAAATaGCAGTCACAGTTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVVKISKITFKLSTQCLALGPCK*QSQFHW Trigger: CCAGTGAAACTGTGACTGGCATTTGCAGGGACCTAA...TGCCAGACACTGTGTGGAGAGCTTAAACGTTATCTTACTAATCTTCACAACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS-3UTR CCA 90 bp | AAGAAACTGATTCATTACGCATGGACTTCCTTTCATGTTCTCTGTTTGCAGCTGAAGTTCTCCATTCCATaGTCCCATTTTCCCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKLIHYAWTSFHVLCLQLKFSIP*SHFPCP Trigger: TGGACAGGGAAAATGGGACCATGGAATGGAGAACTT...CAGCTGCAAACAGAGAACATGAAAGGAAGTCCATGCGTAATGAATCAGTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR GCA 90 bp | AAGATAACGTTTAAGCTCTCCACACAGTGTCTGGCACTGAGTAAGCCTTTTAGGTCCAGCTCTTTGGCTTaGTTTAGTAATAACGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: KITFKLSTQCLALSKPFRSSSLA*FSNNVY Trigger: GTATACGTTATTACTAAAGCAAGCCAAAGAGCTGGA...CCTAAAAGGCTTACTCAGTGCCAGACACTGTGTGGAGAGCTTAAACGTTATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS-3UTR CAA 90 bp | CCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCACTGACATTTTCTGGCTTCACTATTaGCCCATGCAACCGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: PLNTCTVLRAAASQSTDIFWLHY*PMQPGP Trigger: GGGTCCCGGTTGCATGGGCAAATAGTGAAGCCAGAA...AATGTCAGTGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR CAA 90 bp | ACACAGTGTCTGGCACTGAGTAAGCCTTTTAGGTCCCTGCAAATGCCAGTCACATCACTGGTGCTCAGGTaGCCTGAAATGAGGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TQCLALSKPFRSLQMPVTSLVLR*PEMREK Trigger: CTTCTCCCTCATTTCAGGCAACCTGAGCACCAGTGA...TGTGACTGGCATTTGCAGGGACCTAAAAGGCTTACTCAGTGCCAGACACTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS TCA 90 bp | GTCCCTGCAAATGCCAGTCACAGTTTCACTGGTGCTCAGGTTGCCTaGAATGAGGGAGAAGTAACGAGTTCTCCTACTAGGAGCCATACT | + |
|
Preference number: 5 (lower is better) Translates to: VPANASHSFTGAQVA*NEGEVTSSPTRSHT Trigger: AGTATGGCTCCTAGTAGGAGAACTCGTTACTTCTCCCTCATTTCAGGCAACCTGAGCACCAGTGAAACTGTGACTGGCATTTGCAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS-3UTR CAA 90 bp | ACCGGGACCCCAGATTTGTCACTGAAGAAACTGATTCATTACGCATGGACTTCCGCAGCTGGTCATGGGTaGGTCTTTCAGAGAAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TGTPDLSLKKLIHYAWTSAAGHG*VFQRSD Trigger: GTCACTTCTCTGAAAGACCAACCCATGACCAGCTGC...GGAAGTCCATGCGTAATGAATCAGTTTCTTCAGTGACAAATCTGGGGTCCCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR CAA 90 bp | ACCGGGACCCCAGATTTGTCACTGAAGAAACTGATTCATTACGCATGGACTTCCTTTCATGTTCTCTGTTaGCAGCTGGTCATGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGTPDLSLKKLIHYAWTSFHVLC*QLVMGW Trigger: CCAACCCATGACCAGCTGCAAACAGAGAACATGAAA...GGAAGTCCATGCGTAATGAATCAGTTTCTTCAGTGACAAATCTGGGGTCCCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCACCTCTCTTATTCCCTTaGTTCCACTCAACACATGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLFHSTHVLFLGQLPVSPPLLFP*FHSTHV Trigger: TACATGTGTTGAGTGGAACAAAGGGAATAAGAGAGG...TGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTTCCACTCAACACATGTACTGTTCTTAGGGCAGCTGCCAGTCAGTCCACTTTTAGTGTTTCCCAATaGCCTAGTGAACTAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FVPLNTCTVLRAAASQSTFSVSQ*PSELGK Trigger: TTTTCCTAGTTCACTAGGCAATTGGGAAACACTAAA...AGTGGACTGACTGGCAGCTGCCCTAAGAACAGTACATGTGTTGAGTGGAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR CAA 90 bp | TCATTACGCATGGACTTCCTTTCATGTTCTCTGTTTGCAGCTGGTCATGGGTTGACTGACATTTCTTTCTaGGTCTACCACCTCTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLRMDFLSCSLFAAGHGLTDISF*VYHLYS Trigger: AGAATAGAGGTGGTAGACCAAGAAAGAAATGTCAGT...CAACCCATGACCAGCTGCAAACAGAGAACATGAAAGGAAGTCCATGCGTAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAAATGCCAACCAAGGTATTCTTCTGCCCGCTGGAAACTAAGAGTTTTGTGGAAACTAAGAGTTTaGCTCTCGTACCTTCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: KEKCQPRYSSARWKLRVLWKLRV*LSYLPQ Trigger: TTGAGGAAGGTACGAGAGCAAAACTCTTAGTTTCCA...CAAAACTCTTAGTTTCCAGCGGGCAGAAGAATACCTTGGTTGGCATTTCTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481152.2 |
||
| CDS-3UTR CAA 90 bp | ATCGCTTGCAGTGGAAGCTTGGGCAAGTTTCTTGATCTCTCTAAGATGCAAATTTTCATTTCACCAAACTaGAACTTTGCTTCCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IACSGSLGKFLDLSKMQIFISPN*NFASTS Trigger: AGAGGTGGAAGCAAAGTTCAAGTTTGGTGAAATGAA...AATTTGCATCTTAGAGAGATCAAGAAACTTGCCCAAGCTTCCACTGCAAGCGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||
| CDS TCA 72 bp | AATGCCAGTCACAGTTTCACTGGTGCTCAGGTTGCCTaGAATGAGGGAGAAGTAACGAGTTCTCCTACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: NASHSFTGAQVA*NEGEVTSSPTR Trigger: CCTAGTAGGAGAACTCGTTACTTCTCCCTCATTTCAGGCAACCTGAGCACCAGTGAAACTGTGACTGGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423635.5 |
||