Pregenerated sensors for CHCHD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000172586Ensembl transcript IDs: ENST00000372833.6, ENST00000372837.3
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCCTGGAGAGATCTATGTCAGCCTCTTTTCAACAAAAGGGCGTTaGGACCTACAAATGAGACTATGTTCAGAAGCTACTATCTCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: QPGEIYVSLFSTKGR*DLQMRLCSEATISA Trigger: AGCTGAGATAGTAGCTTCTGAACATAGTCTCATTTGTAGGTCCCAACGCCCTTTTGTTGAAAAGAGGCTGACATAGATCTCTCCAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| 3UTR TCA 90 bp | AACTGTAACCTTTCCCACTTTGGCGTGAATAATATACCTCCCAAATaGATGAAAGGGCCTTTCCTAGCAAAAGGCAGGGAGAATCATTAC | + |
|
Preference number: 1 (lower is better) Translates to: NCNLSHFGVNNIPPK*MKGPFLAKGRENHY Trigger: GTAATGATTCTCCCTGCCTTTTGCTAGGAAAGGCCCTTTCATTCATTTGGGAGGTATATTATTCACGCCAAAGTGGGAAAGGTTACAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| 3UTR CCA 90 bp | GGCAACTTCAACTTCCTTATTGCATCCAAAAGCAAGGGCACTAAATaGTGTAAAAGACTTCAAATGCAGGGAAAGACAATACAACGGTAT | + |
|
Preference number: 1 (lower is better) Translates to: GNFNFLIASKSKGTK*CKRLQMQGKTIQRY Trigger: ATACCGTTGTATTGTCTTTCCCTGCATTTGAAGTCTTTTACACCATTTAGTGCCCTTGCTTTTGGATGCAATAAGGAAGTTGAAGTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372833.6 |
||
| 3UTR-3UTR GCA 90 bp | GCCTCTTCTACCCTCCAAAGAGGGCATGGCAATGCCAATGTCTCTAAAATGCCTCTTCAACTTCCTTATTaGATCCAAAAGCAAGGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: ASSTLQRGHGNANVSKMPLQLPY*IQKQGH Trigger: GTGCCCTTGCTTTTGGATGCAATAAGGAAGTTGAAG...AGGCATTTTAGAGACATTGGCATTGCCATGCCCTCTTTGGAGGGTAGAAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372833.6 |
||
| 3UTR-3UTR TCA 90 bp | GCCTCTTCTACCCTCCAAAGAGGGCATGGCAATGCCAATGTCTCTAAAATGCCTTTTCCCACTTTGGCGTaGATAATATACCTCCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: ASSTLQRGHGNANVSKMPFPTLA*IIYLPN Trigger: ATTTGGGAGGTATATTATTCACGCCAAAGTGGGAAA...AGGCATTTTAGAGACATTGGCATTGCCATGCCCTCTTTGGAGGGTAGAAGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCCTGGAGAGATCTATGTCAGCCTCTTTTCAACAAAAGGGCGTTGGGACCTACGAAAGTTCAGAGCAATaGATAAATCCGTCAAGATCA | + |
|
Preference number: 2 (lower is better) Translates to: SLERSMSASFQQKGVGTYESSEQ*INPSRS Trigger: TGATCTTGACGGATTTATTCATTGCTCTGAACTTTC...GTAGGTCCCAACGCCCTTTTGTTGAAAAGAGGCTGACATAGATCTCTCCAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAACAAAAGGGCGTTGGGACCTACAAATGAGACTATGTTCAGAAGCTACTATCCAACATTCTTTAAGGTaGTATTGGTTAGCCTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: STKGRWDLQMRLCSEATIQHSLR*YWLASF Trigger: AAATGAGGCTAACCAATACCACCTTAAAGAATGTTG...GATAGTAGCTTCTGAACATAGTCTCATTTGTAGGTCCCAACGCCCTTTTGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| 3UTR CAA 90 bp | GCAATCACTAAGTATTTACAGACGAAGGCAACTTCAACTTCCTTATaGCATCCAAAAGCAAGGGCACTAAATGGTGTAAAAGACTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: AITKYLQTKATSTSL*HPKARALNGVKDFK Trigger: TTTGAAGTCTTTTACACCATTTAGTGCCCTTGCTTTTGGATGCAATAAGGAAGTTGAAGTTGCCTTCGTCTGTAAATACTTAGTGATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372833.6 |
||
| 3UTR TCA 72 bp | CTTTCCCACTTTGGCGTGAATAATATACCTCCCAAATaGATGAAAGGGCCTTTCCTAGCAAAAGGCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSHFGVNNIPPK*MKGPFLAKGRE Trigger: CTCCCTGCCTTTTGCTAGGAAAGGCCCTTTCATTCATTTGGGAGGTATATTATTCACGCCAAAGTGGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| 3UTR CCA 72 bp | GAGATCTATGTCAGCCTCTTTTCAACAAAAGGGCGTTaGGACCTACAAATGAGACTATGTTCAGAAGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: EIYVSLFSTKGR*DLQMRLCSEAT Trigger: AGTAGCTTCTGAACATAGTCTCATTTGTAGGTCCCAACGCCCTTTTGTTGAAAAGAGGCTGACATAGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| CDS-3UTR TCA 90 bp | TGTTTTGCCTCTTCTACCCTCCAAAGAGGGCATGGCAATGCCAATGTCTCTAAATCACCGACATCTCCGTaGTGCAAGTCGCCTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFASSTLQRGHGNANVSKSPTSP*CKSPRP Trigger: AGGGCGAGGCGACTTGCATCACGGAGATGTCGGTGA...TTTAGAGACATTGGCATTGCCATGCCCTCTTTGGAGGGTAGAAGAGGCAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372833.6 ENST00000372837.3 |
||
| CDS-3UTR TCA 90 bp | TCAACAAAAGGGCGTTGGGACCTACAAATGAGACTATGTTCAGAAGCTACTATCGAGCCATCGGTCACCTaGGCCCTCGCGGCACAATCG | + |
|
Preference number: 4 (lower is better) Translates to: STKGRWDLQMRLCSEATIEPSVT*ALAAQS Trigger: CGATTGTGCCGCGAGGGCTCAGGTGACCGATGGCTC...GATAGTAGCTTCTGAACATAGTCTCATTTGTAGGTCCCAACGCCCTTTTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| CDS-3UTR TCA 90 bp | TCAACAAAAGGGCGTTGGGACCTACAAATGAGACTATGTTCAGAAGCTACTATCTCACCGACATCTCCGTaGTGCAAGTCGCCTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: STKGRWDLQMRLCSEATISPTSP*CKSPRP Trigger: AGGGCGAGGCGACTTGCATCACGGAGATGTCGGTGA...GATAGTAGCTTCTGAACATAGTCTCATTTGTAGGTCCCAACGCCCTTTTGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| CDS-3UTR TCA 90 bp | TTGCCTCTTCTACCCTCCAAAGAGGGCATGGCAATGCCAATGTCTCTAAAATGCCAGGGTTTCCTGTATTaGTCTCATCTTTCGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLPSKEGMAMPMSLKCQGFLY*SHLSGF Trigger: GAAGCCCGAAAGATGAGATCAATACAGGAAACCCTG...GCATTTTAGAGACATTGGCATTGCCATGCCCTCTTTGGAGGGTAGAAGAGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372833.6 ENST00000372837.3 |
||
| CDS-3UTR TCA 90 bp | TTGCCTCTTCTACCCTCCAAAGAGGGCATGGCAATGCCAATGTCTCTAAAATGCCAATCAAGTTTGTCCTaGTGTAGGCCCATAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLPSKEGMAMPMSLKCQSSLS*CRPIVL Trigger: GAGAACTATGGGCCTACATCAGGACAAACTTGATTG...GCATTTTAGAGACATTGGCATTGCCATGCCCTCTTTGGAGGGTAGAAGAGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| CDS-3UTR TCA 90 bp | GCCTCTTCTACCCTCCAAAGAGGGCATGGCAATGCCAATGTCTCTAAAATGCCTAATATACCTCCCAAATaGATGAAAGGGCCTTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ASSTLQRGHGNANVSKMPNIPPK*MKGPFL Trigger: TAGGAAAGGCCCTTTCATTCATTTGGGAGGTATATT...AGGCATTTTAGAGACATTGGCATTGCCATGCCCTCTTTGGAGGGTAGAAGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| CDS-3UTR TCA 90 bp | TTGCCTCTTCTACCCTCCAAAGAGGGCATGGCAATGCCAATGTCTCTAAAATGCGAAAGTTCAGAGCAATaGATAAATCCGTCAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLLPSKEGMAMPMSLKCESSEQ*INPSRS Trigger: TGATCTTGACGGATTTATTCATTGCTCTGAACTTTC...GCATTTTAGAGACATTGGCATTGCCATGCCCTCTTTGGAGGGTAGAAGAGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| CDS-3UTR TCA 90 bp | TCAAGAATGAAGAGAGTACCTAATTCACAACAAAAGGCCAAGTTCTGTTCAGAGCAGGGTTTCCTGTATTaGTCTCATCTTTCGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRMKRVPNSQQKAKFCSEQGFLY*SHLSGF Trigger: GAAGCCCGAAAGATGAGATCAATACAGGAAACCCTG...CTCTGAACAGAACTTGGCCTTTTGTTGTGAATTAGGTACTCTCTTCATTCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372833.6 |
||
| CDS-3UTR TCA 90 bp | TGTTTTGCCTCTTCTACCCTCCAAAGAGGGCATGGCAATGCCAATGTCTCTAAAATCTTTCGGGCTTCCTaGAAACACAAAACAAATACA | + |
|
Preference number: 4 (lower is better) Translates to: CFASSTLQRGHGNANVSKIFRAS*KHKTNT Trigger: TGTATTTGTTTTGTGTTTTCAGGAAGCCCGAAAGAT...TTTAGAGACATTGGCATTGCCATGCCCTCTTTGGAGGGTAGAAGAGGCAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| CDS-3UTR CCA 90 bp | TTGCCTCTTCTACCCTCCAAAGAGGGCATGGCAATGCCAATGTCTCTAAAATGCCAACATTCTTTAAGGTaGTATTGGTTAGCCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLPSKEGMAMPMSLKCQHSLR*YWLASF Trigger: AAATGAGGCTAACCAATACCACCTTAAAGAATGTTG...GCATTTTAGAGACATTGGCATTGCCATGCCCTCTTTGGAGGGTAGAAGAGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| CDS-3UTR CCA 90 bp | TCAACAAAAGGGCGTTGGGACCTACAAATGAGACTATGTTCAGAAGCTACTATCTCAACAAAAGGGCGTTaGGACCTACAAATGAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: STKGRWDLQMRLCSEATISTKGR*DLQMRL Trigger: TAGTCTCATTTGTAGGTCCCAACGCCCTTTTGTTGA...GATAGTAGCTTCTGAACATAGTCTCATTTGTAGGTCCCAACGCCCTTTTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| CDS-3UTR TCA 90 bp | TCAACAAAAGGGCGTTGGGACCTACAAATGAGACTATGTTCAGAAGCTACTATCTTTCCCACTTTGGCGTaGATAATATACCTCCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: STKGRWDLQMRLCSEATIFPTLA*IIYLPN Trigger: ATTTGGGAGGTATATTATTCACGCCAAAGTGGGAAA...GATAGTAGCTTCTGAACATAGTCTCATTTGTAGGTCCCAACGCCCTTTTGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372837.3 |
||
| CDS-3UTR GCA 90 bp | TTCCTTATTGCATCCAAAAGCAAGGGCACTAAATGGTGTAAAAGACTTCAAATGATTCAGAGAGCACCTTaGAGGGACTACGCACAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLIASKSKGTKWCKRLQMIQRAP*RDYAQN Trigger: ATTTTGTGCGTAGTCCCTGCAAGGTGCTCTCTGAAT...CATTTGAAGTCTTTTACACCATTTAGTGCCCTTGCTTTTGGATGCAATAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372833.6 |
||
| CDS-3UTR GCA 90 bp | ATCACTAAGTATTTACAGACGAAGGCAACTTCAACTTCCTTATTGCATCCAAAACTTCAACTTCCTTATTaGATCCAAAAGCAAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITKYLQTKATSTSLLHPKLQLPY*IQKQGH Trigger: GTGCCCTTGCTTTTGGATGCAATAAGGAAGTTGAAG...TTTTGGATGCAATAAGGAAGTTGAAGTTGCCTTCGTCTGTAAATACTTAGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372833.6 |
||
| 3UTR CAA 72 bp | AAGTATTTACAGACGAAGGCAACTTCAACTTCCTTATaGCATCCAAAAGCAAGGGCACTAAATGGTGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KYLQTKATSTSL*HPKARALNGVK Trigger: TTTTACACCATTTAGTGCCCTTGCTTTTGGATGCAATAAGGAAGTTGAAGTTGCCTTCGTCTGTAAATACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372833.6 |
||
| CDS-3UTR CAA 90 bp | TTGCCTCTTCTACCCTCCAAAGAGGGCATGGCAATGCCAATGTCTCTAAAATGCCCAGGGTTTCCTGTATaGATCTCATCTTTCGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPLLPSKEGMAMPMSLKCPGFPV*ISSFGL Trigger: AAGCCCGAAAGATGAGATCAATACAGGAAACCCTGG...GCATTTTAGAGACATTGGCATTGCCATGCCCTCTTTGGAGGGTAGAAGAGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372833.6 ENST00000372837.3 |
||
| CDS-3UTR CAA 90 bp | ATTCAGAGAGCACCTTGCAGGGACTACGCACAAAATAGGCAATCACTAAGTATTCCAGGGTTTCCTGTATaGATCTCATCTTTCGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IQRAPCRDYAQNRQSLSIPGFPV*ISSFGL Trigger: AAGCCCGAAAGATGAGATCAATACAGGAAACCCTGG...AATACTTAGTGATTGCCTATTTTGTGCGTAGTCCCTGCAAGGTGCTCTCTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372833.6 |
||
| CDS-3UTR CAA 90 bp | TTCAAATGCAGGGAAAGACAATACAACGGTATTTGTCCTGCTCCTAGGGCAAATTATTCAGAGAGCACCTaGCAGGGACTACGCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FKCRERQYNGICPAPRANYSEST*QGLRTK Trigger: TTTTGTGCGTAGTCCCTGCAAGGTGCTCTCTGAATA...ATTTGCCCTAGGAGCAGGACAAATACCGTTGTATTGTCTTTCCCTGCATTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372833.6 |
||
| CDS TCA 72 bp | TCTGCTTCCAGCAAGCCATCATCACCGACATCTCCGTaGTGCAAGTCGCCTCGCCCTTCTCCCGGCGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SASSKPSSPTSP*CKSPRPSPGAA Trigger: AGCGGCGCCGGGAGAAGGGCGAGGCGACTTGCATCACGGAGATGTCGGTGATGATGGCTTGCTGGAAGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372833.6 ENST00000372837.3 |
||