RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHAMP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198824

Ensembl transcript IDs: ENST00000361283.4, ENST00000463003.2, ENST00000643483.1, ENST00000644294.1, ENST00000645174.1, ENST00000646155.1, ENST00000646956.1

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTCTACTGATCCAACTATaGTATCTGATAAGCTATACT +
Preference number: 2 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCLLIQL*YLISYT
Trigger: AGTATAGCTTATCAGATAGCATAGTTGGATCAGTAG...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
3UTR-3UTR GCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAACTACTGATCCAACTATaGTATCTGATAAGCTATACT +
Preference number: 2 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKLLIQL*YLISYT
Trigger: AGTATAGCTTATCAGATAGCATAGTTGGATCAGTAG...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
3UTR-3UTR GCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAATACACTTTAACTGAATaGTTTGAGTACAACTTGCTC +
Preference number: 2 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKYTLTE*FEYNLL
Trigger: GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTA...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGCGAATGGCGACTGGATaGAGGAGCCGGGATCCGGGT +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRRMATG*RSRDPG
Trigger: ACCCGGATCCCGGCTCCTGCATCCAGTCGCCATTCG...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361283.4
CDS-3UTR CCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGAGGGGATGGCTTCCTTaGCTCAGGGGAGGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRRGWLP*LRGGSP
Trigger: CGGACTACCTCCCCTGAGCCAAGGAAGCCATCCCCT...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGCAGGAGGGGCTGTTTTaGCAGGCTCGGGAAACAGGG +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRQEGLF*QARETG
Trigger: CCCTGTTTCCCGAGCCTGCCAAAACAGCCCCTCCTG...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGGGAGGTAGTCCGGGCTaGCTTCCGAGATTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRGGSPG*LPRFWR
Trigger: TCTCCAGAATCTCGGAAGTCAGCCCGGACTACCTCC...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGGAGCTCTGGAGATCCTaGTGGACTACGGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRELWRS*WTTDLW
Trigger: CCAGAGATCCGTAGTCCAGCAGGATCTCCAGAGCTC...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGACGTTTGCGTGCTTCTaGAGAAGCAGGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRTFACF*RSRRGC
Trigger: ACAGCCCCTCCTGCTTCTCCAGAAGCACGCAAACGT...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTGTGGTGGGCCGGGTTTaGGAAGCTCTGGAGACACTG +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCVVGRV*EALETL
Trigger: CAGTGTCTCCAGAGCTTCGCAAACCCGGCCCACCAC...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGTCAGGGAAAAGGGCATaGTTCCGGGGCTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRSGKRA*FRGSGK
Trigger: TTTTCCAGAGCCCCGGAAGCATGCCCTTTTCCCTGA...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGAAGCTCTGGAGACACTaGGGGAACTGCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRKLWRH*GNCLPM
Trigger: CATTGGAAGGCAGTTCCCCCAGTGTCTCCAGAGCTT...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGGGGTTTTCTGAGCTCTaGAGATCCTGCTGGACTACG +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRGFSEL*RSCWTT
Trigger: CGTAGTCCAGCAGGATCTCCAGAGCTCAGAAAACCC...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGGAAAAAGGGCACGTTTaGGTGCTTCTGGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPREKGHV*VLLEKQ
Trigger: CTGCTTCTCCAGAAGCACGCAAACGTGCCCTTTTTC...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGGTTCAGGAGACAACGTaGGAGCTGTCTTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRVQETT*ELSFGV
Trigger: AACTCCGAAAGACAGCTCCCACGTTGTCTCCTGAAC...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTACAGAGCCAGGTTTCTaGGGCTCCAGGGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCTEPGF*GSRGVR
Trigger: TCTTACTCCCCTGGAGCCTCAGAAACCTGGCTCTGT...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTACCCTGAGGGTTTTCTaGGCTCTGGAGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCTLRVF*ALEILL
Trigger: CAGCAGGATCTCCAGAGCTCAGAAAACCCTCAGGGT...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGCTGTGTTATCAAATTTaGTGCTCCTCCAGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRLCYQI*CSSSGG
Trigger: ACCGCCACTGGAGGAGCAGCAAATTTGATAACACAG...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTCTCTGGAGATCCTGCTaGACTACGGATCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCLWRSC*TTDLWG
Trigger: TCCCCAGAGATCCGTAGTCCAGCAGGATCTCCAGAG...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACTTTCCAAGAGCCTGGTaGCACAGCGGGGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYFPRAW*HSGGWS
Trigger: AGACCAGCCCCCGCTGTGTCACCAGGCTCTTGGAAA...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGCCATGGGCTGCTACATaGTTTTTAAGGAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRPWAAT*FLRRDS
Trigger: GGAATCTCTCCTTAAAAATCATGTAGCAGCCCATGG...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGAGCACATTTCTAGACTaGTCTGGACTAGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRSTFLD*SGLVMS
Trigger: GGACATGACTAGTCCAGAGCAGTCTAGAAATGTGCT...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGTTTCCAAGAGCCTGGTaGCACAGCGGGGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKFPRAW*HSGGWS
Trigger: AGACCAGCCCCCGCTGTGTCACCAGGCTCTTGGAAA...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAGACACTGGGGGAACTaGCTTCCAATGTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCRHWGN*LPMFRR
Trigger: TCTCCTGAACATTGGAAGGCAGTTCCCCCAGTGTCT...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCCTCCCGAATGGCGACTaGATGCAGGAGCCGGGATCC +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLLPNGD*MQEPGS
Trigger: GGATCCCGGCTCCTGCATCCAGTCGCCATTCGGGAG...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361283.4
CDS-3UTR CCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTCAGCGGCCTCCCGAATaGCGACTGGATGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAQRPPE*RLDAGA
Trigger: GGCTCCTGCATCCAGTCGCCATTCGGGAGGCCGCTG...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361283.4
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGAGGGGATGGCTTCCTTaGCTCAGGGGAGGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKRGWLP*LRGGSP
Trigger: CGGACTACCTCCCCTGAGCCAAGGAAGCCATCCCCT...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTCATAGTCTGTGCCTCTaGAACTGCAATGGTCACACT +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCHSLCL*NCNGHT
Trigger: AGTGTGACCATTGCAGTTTCAGAGGCACAGACTATG...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAACAGAGCCAGGTTTCTaGGGCTCCAGGGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKTEPGF*GSRGVR
Trigger: TCTTACTCCCCTGGAGCCTCAGAAACCTGGCTCTGT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAACCCTGAGGGTTTTCTaGGCTCTGGAGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKTLRVF*ALEILL
Trigger: CAGCAGGATCTCCAGAGCTCAGAAAACCCTCAGGGT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTGGAGAAGTTTTCCGCTaGTCAGGAGAAAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCGEVFR*SGESFQ
Trigger: TTGGAAGCTTTCTCCTGATCAGCGGAAAACTTCTCC...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACAGGCTTCCAGATATCTaGGGCTGCTTTGGGGGACTC +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYRLPDI*GCFGGL
Trigger: GAGTCCCCCAAAGCAGCCTCAGATATCTGGAAGCCT...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAAGGCTTCCAGATATCTaGGGCTGCTTTGGGGGACTC +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKRLPDI*GCFGGL
Trigger: GAGTCCCCCAAAGCAGCCTCAGATATCTGGAAGCCT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGAATGGAAGACTCCACTaGAAACAACTATGGACAAGA +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRNGRLH*KQLWTR
Trigger: TCTTGTCCATAGTTGTTTTCAGTGGAGTCTTCCATT...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAGAGCTCTGGAGATCCTaGTGGACTACGGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKELWRS*WTTDLW
Trigger: CCAGAGATCCGTAGTCCAGCAGGATCTCCAGAGCTC...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTGAGACTTCCAGGAGCTaGGTGAGACTGATGAAGATT +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCETSRS*VRLMKI
Trigger: AATCTTCATCAGTCTCACCCAGCTCCTGGAAGTCTC...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGGGTTTGCGAAGCTCTaGAGACACTGGGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKGFAKL*RHWGNC
Trigger: GCAGTTCCCCCAGTGTCTCCAGAGCTTCGCAAACCC...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACTGGCCCAGAAGGACCTaGTTTTCGGGTCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYWPRRT*FSGLRE
Trigger: TTCCCTGAGACCCGAAAACCAGGTCCTTCTGGGCCA...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAATGGCCCAGAAGGACCTaGTTTTCGGGTCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKWPRRT*FSGLRE
Trigger: TTCCCTGAGACCCGAAAACCAGGTCCTTCTGGGCCA...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAATGCTTCCGGGGCTCTaGAAAAAGGGCACGTTTGCG +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKMLPGL*KKGTFA
Trigger: CGCAAACGTGCCCTTTTTCCAGAGCCCCGGAAGCAT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGTGTACTCATGTGTCCTaGAAGAAATGTCCTAAGCAT +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRCTHVS*KKCPKH
Trigger: ATGCTTAGGACATTTCTTCCAGGACACATGAGTACA...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR TCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGAGGTTCAGGAGACTCTaGAGGGGATGGCTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKRFRRL*RGWLPW
Trigger: CCAAGGAAGCCATCCCCTTCAGAGTCTCCTGAACCT...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTGTGGTGGGCCGGGTTTaGGAAGCTCTGGAGACACTG +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAVVGRV*EALETL
Trigger: CAGTGTCTCCAGAGCTTCGCAAACCCGGCCCACCAC...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACTCAGGGAAAAGGGCATaGTTCCGGGGCTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYSGKRA*FRGSGK
Trigger: TTTTCCAGAGCCCCGGAAGCATGCCCTTTTCCCTGA...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTTGTTATCAAATTTGCTaGTCCTCCAGTGGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCCYQIC*SSSGGS
Trigger: TGAACCGCCACTGGAGGAGCAGCAAATTTGATAACA...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGTCACAAAATTCTGGATaGATGGTACCCATATGGATT +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRSQNSG*MVPIWI
Trigger: AATCCATATGGGTACCATCCATCCAGAATTTTGTGA...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGTTCATCACAAAATTCTaGATGGATGGTACCCATATG +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRFITKF*MDGTHM
Trigger: CATATGGGTACCATCCATCCAGAATTTTGTGATGAA...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCGGGTTTGCGAAGCTCTaGAGACACTGGGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLGFAKL*RHWGNC
Trigger: GCAGTTCCCCCAGTGTCTCCAGAGCTTCGCAAACCC...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGCTCTGGAGATCCTGCTaGACTACGGATCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKLWRSC*TTDLWG
Trigger: TCCCCAGAGATCCGTAGTCCAGCAGGATCTCCAGAG...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGTATCTGAGGCTGCTTTaGGGGACTCAGATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKYLRLL*GTQMAQ
Trigger: CTGGGCCATCTGAGTCCCCCAAAGCAGCCTCAGATA...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTCAGGAGGGGCTGTTTTaGCAGGCTCGGGAAACAGGG +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAQEGLF*QARETG
Trigger: CCCTGTTTCCCGAGCCTGCCAAAACAGCCCCTCCTG...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGACGTTTGCGTGCTTCTaGAGAAGCAGGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKTFACF*RSRRGC
Trigger: ACAGCCCCTCCTGCTTCTCCAGAAGCACGCAAACGT...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGATGCTTCCGGGGCTCTaGAAAAAGGGCACGTTTGCG +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKMLPGL*KKGTFA
Trigger: CGCAAACGTGCCCTTTTTCCAGAGCCCCGGAAGCAT...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAGAATAGAGCAGATTTaGGGAGTTCAGGGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCRIEQI*GVQGKG
Trigger: CCCTTTTCCCTGAACTCCCCAAATCTGCTCTATTCT...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAGTACATCTTGCTGGTaGAGAAGCATTTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCSTSCW*RSIYGS
Trigger: ACTGCCATAAATGCTTCTTCACCAGCAAGATGTACT...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACACAGGGGCAAGTTTCTaGGACTCACAAACAGGGACT +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYTGASF*DSQTGT
Trigger: AGTCCCTGTTTGTGAGTCTCAGAAACTTGCCCCTGT...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTGGTAAAATATCATTTTaGCTAGCCCACCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCGKISF*LAHQHP
Trigger: TGGATGCTGGTGGGCTAGGCAAAATGATATTTTACC...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCAAGGGCACGTTTGCGTaGTTCTGGAGAAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLKGTFA*FWRSRR
Trigger: CCTCCTGCTTCTCCAGAAGCACGCAAACGTGCCCTT...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTGGTTTACGAAGTTCCTaGAATGCTTCCATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCGLRSS*NASILL
Trigger: CAGAAGAATGGAAGCATTCCAGGAACTTCGTAAACC...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGAAAATTCTGGATGGATaGTACCCATATGGATTTGTA +
Preference number: 4 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRKILDG*YPYGFV
Trigger: TACAAATCCATATGGGTACCATCCATCCAGAATTTT...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCTTCTGGAGATGCAGCTaGGGATGGTCCCCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLFWRCS*GWSPRF
Trigger: GAACCTTGGGGACCATCCCCAGCTGCATCTCCAGAA...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAATCCAGGAGACACAGATaGAGCAGGTTTAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKSRRHR*SRFSWL
Trigger: AAGCCAGCTAAACCTGCTCCATCTGTGTCTCCTGGA...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGAAGCTCTGGAGACACTaGGGGAACTGCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKKLWRH*GNCLPM
Trigger: CATTGGAAGGCAGTTCCCCCAGTGTCTCCAGAGCTT...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGTTTGGGGGACTCAGATaGCCCAGAAGGACCTGGTTT +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKFGGLR*PRRTWF
Trigger: AAACCAGGTCCTTCTGGGCCATCTGAGTCCCCCAAA...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCTATCTGAGGCTGCTTTaGGGGACTCAGATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLYLRLL*GTQMAQ
Trigger: CTGGGCCATCTGAGTCCCCCAAAGCAGCCTCAGATA...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCGGACACCCCAGCAGCTaGAACACAGTTGCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLGHPSS*NTVAGK
Trigger: TTTTCCGGCAACTGTGTTCCAGCTGCTGGGGTGTCC...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR TCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTTTCTACATGGCTTTTTaGCTAAACCACAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCFYMAF*LNHSKQ
Trigger: CTGTTTGCTGTGGTTTAGTCAAAAAGCCATGTAGAA...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361283.4
CDS-3UTR TCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTTTTCTGTGTTTCCATTaGAAGGGCAGGTATGGATTT +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCFLCFH*KGRYGF
Trigger: AAATCCATACCTGCCCTTTCAATGGAAACACAGAAA...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTTTCTGGAGACAAAACTaGACCAAGTTTCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCFWRQN*TKFLCF
Trigger: GAAACACAGAAACTTGGTTCAGTTTTGTCTCCAGAA...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGAACAGAGGCAGGTTTTaGAGGCTCAGGAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKNRGRF*RLRRRK
Trigger: CTTCCTTCTCCTGAGCCTTCAAAACCTGCCTCTGTT...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACCTCACAAACAGGGACTaGTTTTGGAGGTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYLTNRD*FWRFRR
Trigger: TCTCCTGAACCTCCAAAATCAGTCCCTGTTTGTGAG...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGACAGGGGCAAGTTTCTaGGACTCACAAACAGGGACT +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKTGASF*DSQTGT
Trigger: AGTCCCTGTTTGTGAGTCTCAGAAACTTGCCCCTGT...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAAATGTTTCCGGGAAATaGGACTGCTTCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKNVSGK*DCFWGL
Trigger: CAAACCCCAGAAGCAGTCTCATTTCCCGGAAACATT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACAATGTTTCCGGGAAATaGGACTGCTTCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYNVSGK*DCFWGL
Trigger: CAAACCCCAGAAGCAGTCTCATTTCCCGGAAACATT...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAGGAGAAGTTTTCCGCTaGTCAGGAGAAAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKGEVFR*SGESFQ
Trigger: TTGGAAGCTTTCTCCTGATCAGCGGAAAACTTCTCC...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACTTCAGAGAAGTTACCTaGCTTTCTCTGGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYFREVT*LSLVQA
Trigger: AGCCTGGACCAGAGAAAGTCAGGTAACTTCTCTGAA...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR GCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTAAGGGCACGTTTGCGTaGTTCTGGAGAAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAKGTFA*FWRSRR
Trigger: CCTCCTGCTTCTCCAGAAGCACGCAAACGTGCCCTT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACCTGTGTTATCAAATTTaGTGCTCCTCCAGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYLCYQI*CSSSGG
Trigger: ACCGCCACTGGAGGAGCAGCAAATTTGATAACACAG...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACCCTCTGAAACTGCAATaGTCACACTCCAAACGTGCT +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYPLKLQ*SHSKRA
Trigger: AGCACGTTTGGAGTGTGACCATTGCAGTTTCAGAGG...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTTTCTGGAGATGCAGCTaGGGATGGTCCCCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAFWRCS*GWSPRF
Trigger: GAACCTTGGGGACCATCCCCAGCTGCATCTCCAGAA...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGTCCAGGAGACACAGATaGAGCAGGTTTAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKSRRHR*SRFSWL
Trigger: AAGCCAGCTAAACCTGCTCCATCTGTGTCTCCTGGA...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACGAGACTTCCAGGAGCTaGGTGAGACTGATGAAGATT +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYETSRS*VRLMKI
Trigger: AATCTTCATCAGTCTCACCCAGCTCCTGGAAGTCTC...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACGCGTCTGAGCTCTCTTaGTTGTCTTTCTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYASELS*LSFLSF
Trigger: GAAGCTCAAGAAAGACAACCAAGAGAGCTCAGACGC...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGCATAGTCTGTGCCTCTaGAACTGCAATGGTCACACT +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKHSLCL*NCNGHT
Trigger: AGTGTGACCATTGCAGTTTCAGAGGCACAGACTATG...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGCTCACAAACAGGGACTaGTTTTGGAGGTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKLTNRD*FWRFRR
Trigger: TCTCCTGAACCTCCAAAATCAGTCCCTGTTTGTGAG...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCAAGAGTAGCCTTTACTaGCTCAGGAGATACAGGGGC +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLKSSLY*LRRYRG
Trigger: GCCCCTGTATCTCCTGAGTCAGTAAAGGCTACTCTT...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGACATCAACCTGCTCTTaGTCACTGCTTGATTCCTGG +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKTSTCS*SLLDSW
Trigger: CCAGGAATCAAGCAGTGATCAAGAGCAGGTTGATGT...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACCCATGGGCTGCTACATaGTTTTTAAGGAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYPWAAT*FLRRDS
Trigger: GGAATCTCTCCTTAAAAATCATGTAGCAGCCCATGG...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTACCTCTTGGGAAATTTaGTTCAAAATTACAACGTGG +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCTSWEI*FKITTW
Trigger: CCACGTTGTAATTTTGAATCAAATTTCCCAAGAGGT...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGAGCAGAGATCCTGAATaGTGTGAAGGCGCATACCAA +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKSRDPE*CEGAYQ
Trigger: TTGGTATGCGCCTTCACATCATTCAGGATCTCTGCT...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR GCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCAGACACTGGGGGAACTaGCTTCCAATGTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLRHWGN*LPMFRR
Trigger: TCTCCTGAACATTGGAAGGCAGTTCCCCCAGTGTCT...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTTCACAAAATTCTGGATaGATGGTACCCATATGGATT +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCSQNSG*MVPIWI
Trigger: AATCCATATGGGTACCATCCATCCAGAATTTTGTGA...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTTTCATCACAAAATTCTaGATGGATGGTACCCATATG +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCFITKF*MDGTHM
Trigger: CATATGGGTACCATCCATCCAGAATTTTGTGATGAA...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCGTTCAGGAGACAACGTaGGAGCTGTCTTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLVQETT*ELSFGV
Trigger: AACTCCGAAAGACAGCTCCCACGTTGTCTCCTGAAC...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTGGGTTTTCTGAGCTCTaGAGATCCTGCTGGACTACG +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAGFSEL*RSCWTT
Trigger: CGTAGTCCAGCAGGATCTCCAGAGCTCAGAAAACCC...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGCCACGGGAACTTTTCTaGGACTCAGGGAAATCAAGT +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKPRELF*DSGKSS
Trigger: ACTTGATTTCCCTGAGTCCCAGAAAAGTTCCCGTGG...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAAGAATAGAGCAGATTTaGGGAGTTCAGGGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKRIEQI*GVQGKG
Trigger: CCCTTTTCCCTGAACTCCCCAAATCTGCTCTATTCT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACTCACTGCTTGATTCCTaGCCCTTAATATCCATCGCA +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYSLLDS*PLISIA
Trigger: TGCGATGGATATTAAGGGCCAGGAATCAAGCAGTGA...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTAAGAGTAGCCTTTACTaGCTCAGGAGATACAGGGGC +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAKSSLY*LRRYRG
Trigger: GCCCCTGTATCTCCTGAGTCAGTAAAGGCTACTCTT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAACTTTGCCCATGGGCTaGTACATGATTTTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKTLPMG*YMIFKE
Trigger: CTCCTTAAAAATCATGTAGCAGCCCATGGGCAAAGT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGTGTTATCAAATTTGCTaGTCCTCCAGTGGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKCYQIC*SSSGGS
Trigger: TGAACCGCCACTGGAGGAGCAGCAAATTTGATAACA...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTTACACTTTAACTGAATaGTTTGAGTACAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCYTLTE*FEYNLL
Trigger: GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTA...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAAATTCTGGATGGATaGTACCCATATGGATTTGTA +
Preference number: 4 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCKILDG*YPYGFV
Trigger: TACAAATCCATATGGGTACCATCCATCCAGAATTTT...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAAAGAGGAGTAGGTTTTaGCGATTCTGGAGACAAAAC +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKKRSRF*RFWRQN
Trigger: GTTTTGTCTCCAGAATCGCCAAAACCTACTCCTCTT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCCCACGGGAACTTTTCTaGGACTCAGGGAAATCAAGT +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLPRELF*DSGKSS
Trigger: ACTTGATTTCCCTGAGTCCCAGAAAAGTTCCCGTGG...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGTCACTGCTTGATTCCTaGCCCTTAATATCCATCGCA +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKSLLDS*PLISIA
Trigger: TGCGATGGATATTAAGGGCCAGGAATCAAGCAGTGA...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAATGGCGTTCATGAGTTaGAAAGATAAGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKMAFMS*KDKVES
Trigger: ACTCTCCACCTTATCTTTCCAACTCATGAACGCCAT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR TCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTACACTCCAAACGTGCTaGTGGTTTACGAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEATLQTC*WFTKFL
Trigger: CAGGAACTTCGTAAACCATCAGCACGTTTGGAGTGT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAATTTCTGTGTTTCCATTaGAAGGGCAGGTATGGATTT +
Preference number: 4 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKFLCFH*KGRYGF
Trigger: AAATCCATACCTGCCCTTTCAATGGAAACACAGAAA...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTACATCAACCTGCTCTTaGTCACTGCTTGATTCCTGG +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEATSTCS*SLLDSW
Trigger: CCAGGAATCAAGCAGTGATCAAGAGCAGGTTGATGT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCACTTATCTGTGCATGTaGGGGTATTTCTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLTYLCM*GYFCRE
Trigger: TTCCCTGCAGAAATACCCTCACATGCACAGATAAGT...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR GCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCAGCACATTTCTAGACTaGTCTGGACTAGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLSTFLD*SGLVMS
Trigger: GGACATGACTAGTCCAGAGCAGTCTAGAAATGTGCT...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACTTAGGCTTAAAGCAGTaGTTTGCAATATGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYLGLKQ*FAIWRS
Trigger: TGAACGCCATATTGCAAAGCACTGCTTTAAGCCTAA...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR CCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGGTTTACGAAGTTCCTaGAATGCTTCCATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKGLRSS*NASILL
Trigger: CAGAAGAATGGAAGCATTCCAGGAACTTCGTAAACC...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGTTCTGGAGACAAAACTaGACCAAGTTTCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKFWRQN*TKFLCF
Trigger: GAAACACAGAAACTTGGTTCAGTTTTGTCTCCAGAA...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTGCAATATGGCGTTCATaGGTTGGAAAGATAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAAIWRS*VGKIRW
Trigger: CCACCTTATCTTTCCAACTCATGAACGCCATATTGC...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR GCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCGGTAAAATATCATTTTaGCTAGCCCACCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLGKISF*LAHQHP
Trigger: TGGATGCTGGTGGGCTAGGCAAAATGATATTTTACC...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTCCATTTGTCTGGGGATaGATGTTTGGATGTGATGTG +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAPFVWG*MFGCDV
Trigger: CACATCACATCCAAACATGCATCCCCAGACAAATGG...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGTTGGTTCTGCTGAATTaGAGGGTATTTTCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKLVLLN*RVFSGV
Trigger: AACACCAGAAAATACCCTGCAATTCAGCAGAACCAA...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACACGCTTCATGTATTTTaGAATCTCCTCTTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: QMLILSNTTETVKHGTPYTLHVF*NLLFRD
Trigger: ATCTCTGAAGAGGAGATTGCAAAATACATGAAGCGT...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGCCTTTCCACAGATTGTaGATTTGTAAGGGCTATGAA +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKPFHRL*ICKGYE
Trigger: TTCATAGCCCTTACAAATGCACAATCTGTGGAAAGG...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTTGGAAAAGACCTCTATaGATGGGACATTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAWKRPL*MGHSSR
Trigger: TCTGCTGGAATGTCCCATGCATAGAGGTCTTTTCCA...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR CCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTTTCACTTGTCTCCTGTaGGAGAAGGCTGCAAACTAT +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAFTCLL*EKAANY
Trigger: ATAGTTTGCAGCCTTCTCCCACAGGAGACAAGTGAA...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTAAAGACCTCTATGCATaGGACATTCCAGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAKDLYA*DIPAEI
Trigger: GATCTCTGCTGGAATGTCCCATGCATAGAGGTCTTT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR TCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGACCTCTTGGGAAATTTaGTTCAAAATTACAACGTGG +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKTSWEI*FKITTW
Trigger: CCACGTTGTAATTTTGAATCAAATTTCCCAAGAGGT...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTACTTTGCCCATGGGCTaGTACATGATTTTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEATLPMG*YMIFKE
Trigger: CTCCTTAAAAATCATGTAGCAGCCCATGGGCAAAGT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTAAGAGGAGTAGGTTTTaGCGATTCTGGAGACAAAAC +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAKRSRF*RFWRQN
Trigger: GTTTTGTCTCCAGAATCGCCAAAACCTACTCCTCTT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTAATGGAAGACTCCACTaGAAACAACTATGGACAAGA +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEANGRLH*KQLWTR
Trigger: TCTTGTCCATAGTTGTTTTCAGTGGAGTCTTCCATT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCTTTAATGAGAAAGACTaGACACCTTCCCTTATTGAC +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLFNEKD*TPSLID
Trigger: GTCAATAAGGGAAGGTGTTCAGTCTTTCTCATTAAA...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR TCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCATATGGAATAAGCACTaGCTTTCCCTGTACTTATCT +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLIWNKH*LSLYLS
Trigger: AGATAAGTACAGGGAAAGTCAGTGCTTATTCCATAT...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR GCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTTTGGTTCTGCTGAATTaGAGGGTATTTTCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEALVLLN*RVFSGV
Trigger: AACACCAGAAAATACCCTGCAATTCAGCAGAACCAA...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTCCTTTCCACAGATTGTaGATTTGTAAGGGCTATGAA +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAPFHRL*ICKGYE
Trigger: TTCATAGCCCTTACAAATGCACAATCTGTGGAAAGG...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGCTACTGATCCAACTATaGTATCTGATAAGCTATACT +
Preference number: 4 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKLLIQL*YLISYT
Trigger: AGTATAGCTTATCAGATAGCATAGTTGGATCAGTAG...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCATTTCTAGACTGCTCTaGACTAGTCATGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLISRLL*TSHVHF
Trigger: AAAATGGACATGACTAGTCCAGAGCAGTCTAGAAAT...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR TCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTGTCCTAAGCATATATTaGTCAACACACATGCTTTAC +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAVLSIY*STHMLY
Trigger: GTAAAGCATGTGTGTTGATCAATATATGCTTAGGAC...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR GCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTACGCTTCATGTATTTTaGAATCTCCTCTTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEATLHVF*NLLFRD
Trigger: ATCTCTGAAGAGGAGATTGCAAAATACATGAAGCGT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTATTTCTAGACTGCTCTaGACTAGTCATGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAISRLL*TSHVHF
Trigger: AAAATGGACATGACTAGTCCAGAGCAGTCTAGAAAT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
3UTR CAA 72 bp CACAGATACACTTTAACTGAATGCTTTGAGTACAACTaGCTCTTGATTATTAAATGGAATGCCTACTTCCTT +
Preference number: 4 (lower is better)
Translates to: HRYTLTECFEYN*LLIIKWNAYFL
Trigger: AAGGAAGTAGGCATTCCATTTAATAATCAAGAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR GCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTAAAAACTTTCAATACTaGTGCTGTCTTACTAGACAC +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEAKNFQY*CCLTRH
Trigger: GTGTCTAGTAAGACAGCAGCAGTATTGAAAGTTTTT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361283.4
CDS-3UTR GCA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTCTACTGATCCAACTATaGTATCTGATAAGCTATACT +
Preference number: 4 (lower is better)
Translates to: NPETPTFHDIKANKHLEALLIQL*YLISYT
Trigger: AGTATAGCTTATCAGATAGCATAGTTGGATCAGTAG...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS GCA 90 bp TCCGCGAGGCCCTGCAGCGCAGCGGCCTCCCGAATGGCGACTGGATaGAGGAGCCGGGATCCGGGTGCGCGAGCGTGCGCGCTCCCGCGG +
Preference number: 5 (lower is better)
Translates to: SARPCSAAASRMATG*RSRDPGARACALPR
Trigger: CCGCGGGAGCGCGCACGCTCGCGCACCCGGATCCCGGCTCCTGCATCCAGTCGCCATTCGGGAGGCCGCTGCGCTGCAGGGCCTCGCGGA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646956.1
CDS CCA 90 bp TCGCGGGCGGCTCCGCGAGGCCCTGCAGCGCAGCGGCCTCCCGAATaGCGACTGGATGCAGGAGCCGGGATCCGGGTGCGCGAGCGTGCG +
Preference number: 5 (lower is better)
Translates to: SRAAPRGPAAQRPPE*RLDAGAGIRVRERA
Trigger: CGCACGCTCGCGCACCCGGATCCCGGCTCCTGCATCCAGTCGCCATTCGGGAGGCCGCTGCGCTGCAGGGCCTCGCGGAGCCGCCCGCGA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463003.2
ENST00000645174.1
ENST00000646956.1
CDS CCA 90 bp CGGCTCCGCGAGGCCCTGCAGCGCAGCGGCCTCCCGAATGGCGACTaGATGCAGGAGCCGGGATCCGGGTGCGCGAGCGTGCGCGCTCCC +
Preference number: 5 (lower is better)
Translates to: RLREALQRSGLPNGD*MQEPGSGCASVRAP
Trigger: GGGAGCGCGCACGCTCGCGCACCCGGATCCCGGCTCCTGCATCCAGTCGCCATTCGGGAGGCCGCTGCGCTGCAGGGCCTCGCGGAGCCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646956.1
CDS CCA 90 bp CATGTTCAAATATCGGTCCGGCCGCGGGCGGCGTCCAGTGGGCGATaGACCGCGCGGAGGGCCCGGCTCGCGGTCGCGGGCGGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: HVQISVRPRAASSGR*TARRARLAVAGGSA
Trigger: CGCGGAGCCGCCCGCGACCGCGAGCCGGGCCCTCCGCGCGGTCCATCGCCCACTGGACGCCGCCCGCGGCCGGACCGATATTTGAACATG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646155.1
CDS CCA 90 bp ACTAAACCACAGCAAACAGCCGGTCCGGCCGCGGGCGGCGTCCAGTaGGCGATGGACCGCGCGGAGGGCCCGGCTCGCGGTCGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: TKPQQTAGPAAGGVQ*AMDRAEGPARGRGR
Trigger: CCGCCCGCGACCGCGAGCCGGGCCCTCCGCGCGGTCCATCGCCCACTGGACGCCGCCCGCGGCCGGACCGGCTGTTTGCTGTGGTTTAGT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645174.1
CDS CCA 90 bp TGTTTTACATGTTCAAATATCGGTCCGGCCGCGGGCGGCGTCCAGTaGGCGATGGACCGCGCGGAGGGCCCGGCTCGCGGTCGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: CFTCSNIGPAAGGVQ*AMDRAEGPARGRGR
Trigger: CCGCCCGCGACCGCGAGCCGGGCCCTCCGCGCGGTCCATCGCCCACTGGACGCCGCCCGCGGCCGGACCGATATTTGAACATGTAAAACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646155.1
CDS-3UTR CAA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGATATCTGAGGCTGCTTaGGGGGACTCAGATGGCCCA +
Preference number: 5 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRISEAA*GDSDGP
Trigger: TGGGCCATCTGAGTCCCCCAAAGCAGCCTCAGATAT...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 90 bp GGAAGAGGTGTCTGTAGCTCAGGAGAAACAACAGAGCCAGGTTTCTaGGGCTCCAGGGGAGTAAGAGGAGTAGGTTTTGGCGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: GRGVCSSGETTEPGF*GSRGVRGVGFGDSG
Trigger: TCCAGAATCGCCAAAACCTACTCCTCTTACTCCCCTGGAGCCTCAGAAACCTGGCTCTGTTGTTTCTCCTGAGCTACAGACACCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361283.4
ENST00000643483.1
ENST00000644294.1
CDS TCA 90 bp GATCAGGAGAAAGCTTCCAAAGATCTGGTGACCCTGAGGGTTTTCTaGGCTCTGGAGATCCTGCTGGACTACGGATCTCTGGGGATAGTG +
Preference number: 5 (lower is better)
Translates to: DQEKASKDLVTLRVF*ALEILLDYGSLGIV
Trigger: CACTATCCCCAGAGATCCGTAGTCCAGCAGGATCTCCAGAGCTCAGAAAACCCTCAGGGTCACCAGATCTTTGGAAGCTTTCTCCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CCA 90 bp CAGACTTCCATGACTCAGGAGATGCAGGGGGAGACTTCCAGGAGCTaGGTGAGACTGATGAAGATTTCCAGGATGCAGAAGACACAGATG +
Preference number: 5 (lower is better)
Translates to: QTSMTQEMQGETSRS*VRLMKISRMQKTQM
Trigger: CATCTGTGTCTTCTGCATCCTGGAAATCTTCATCAGTCTCACCCAGCTCCTGGAAGTCTCCCCCTGCATCTCCTGAGTCATGGAAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGGGAAAAAGGGCACGTTaGCGTGCTTCTGGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRGKRAR*RASGEA
Trigger: TGCTTCTCCAGAAGCACGCAAACGTGCCCTTTTTCC...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 90 bp GACTCTGGAGATGAGGCTGAAGGTGGCCCCAATGTTTCCGGGAAATaGGACTGCTTCTGGGGTTTGGGATTACTAAGAGTAGCCTTTACT +
Preference number: 5 (lower is better)
Translates to: DSGDEAEGGPNVSGK*DCFWGLGLLRVAFT
Trigger: AGTAAAGGCTACTCTTAGTAATCCCAAACCCCAGAAGCAGTCTCATTTCCCGGAAACATTGGGGCCACCTTCAGCCTCATCTCCAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CCA 90 bp CACCAAGCTCAACAGCCTTCTGTGATTCTGAGAATAGAGCAGATTTaGGGAGTTCAGGGAAAAGGGCATGCTTCCGGGGCTCTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: HQAQQPSVILRIEQI*GVQGKGHASGALEK
Trigger: TTTTTCCAGAGCCCCGGAAGCATGCCCTTTTCCCTGAACTCCCCAAATCTGCTCTATTCTCAGAATCACAGAAGGCTGTTGAGCTTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACGCAGGAGGGGCTGTTTaGGCAGGCTCGGGAAACAGG +
Preference number: 5 (lower is better)
Translates to: QMLILSNTTETVKHGTPYAGGAV*AGSGNR
Trigger: CCTGTTTCCCGAGCCTGCCAAAACAGCCCCTCCTGC...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 90 bp ATGAGACTGCTTCTGGGGTTTGGGATTACTAAGAGTAGCCTTTACTaGCTCAGGAGATACAGGGGCAGGTTTCTGTGGTTCTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: MRLLLGFGITKSSLY*LRRYRGRFLWFWRR
Trigger: CCTTCTCCAGAACCACAGAAACCTGCCCCTGTATCTCCTGAGTCAGTAAAGGCTACTCTTAGTAATCCCAAACCCCAGAAGCAGTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 90 bp TGGAAAAGACCTCTATGCATGGGACATTCCAGCAGAGATCCTGAATaGTGTGAAGGCGCATACCAACCAAAGGGCAAATCAGAGGACACC +
Preference number: 5 (lower is better)
Translates to: WKRPLCMGHSSRDPE*CEGAYQPKGKSEDT
Trigger: GGTGTCCTCTGATTTGCCCTTTGGTTGGTATGCGCCTTCACATCATTCAGGATCTCTGCTGGAATGTCCCATGCATAGAGGTCTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS TCA 90 bp TTCTGGGACTCAGGGAAATCAAGTGAAGCAGGAGAAGTTTTCCGCTaGTCAGGAGAAAGCTTCCAAAGATCTGGTGACCCTGAGGGTTTT +
Preference number: 5 (lower is better)
Translates to: FWDSGKSSEAGEVFR*SGESFQRSGDPEGF
Trigger: AAAACCCTCAGGGTCACCAGATCTTTGGAAGCTTTCTCCTGATCAGCGGAAAACTTCTCCTGCTTCACTTGATTTCCCTGAGTCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAAACAAAGATGAGAAGTaGAACCGGTCCGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKNKDEK*NRSGRG
Trigger: CCCGCGGCCGGACCGGTTCAACTTCTCATCTTTGTT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361283.4
CDS-3UTR CAA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGAAACAGGGACTGATTTaGGAGGTTCAGGAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRKQGLI*EVQEKK
Trigger: TTTCTTCTCCTGAACCTCCAAAATCAGTCCCTGTTT...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp TTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTAAGGCCCAGGTCTGAGCTCTCTTGGTaGTCTTTCTTGAGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: FLLINLVLSPNRRHVRPRSELSW*SFLSFF
Trigger: AAAGAAGCTCAAGAAAGACAACCAAGAGAGCTCAGA...CCTGGGCCTTACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 90 bp ATAGTCTGTGCCTCTGAAACTGCAATGGTCACACTCCAAACGTGCTaGTGGTTTACGAAGTTCCTGGAATGCTTCCATTCTTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: IVCASETAMVTLQTC*WFTKFLECFHSSVC
Trigger: GCAGACAGAAGAATGGAAGCATTCCAGGAACTTCGTAAACCATCAGCACGTTTGGAGTGTGACCATTGCAGTTTCAGAGGCACAGACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644294.1
CDS-3UTR CAA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCAGTGGTGGGCCGGGTTaGCGAAGCTCTGGAGACACT +
Preference number: 5 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLSGGPG*RSSGDT
Trigger: AGTGTCTCCAGAGCTTCGCAAACCCGGCCCACCACT...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTGCAGGAGGGGCTGTTTaGGCAGGCTCGGGAAACAGG +
Preference number: 5 (lower is better)
Translates to: NPETPTFHDIKANKHLEAAGGAV*AGSGNR
Trigger: CCTGTTTCCCGAGCCTGCCAAAACAGCCCCTCCTGC...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 90 bp ATAGTCTGTGCCTCTGAAACTGCAATGGTCACACTCCAAACGTGCTaGTGGTTTACGAAGTTCCTGGAATGCTTCCATTCTTCTGTCTGT +
Preference number: 5 (lower is better)
Translates to: IVCASETAMVTLQTC*WFTKFLECFHSSVC
Trigger: ACAGACAGAAGAATGGAAGCATTCCAGGAACTTCGTAAACCATCAGCACGTTTGGAGTGTGACCATTGCAGTTTCAGAGGCACAGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361283.4
ENST00000463003.2
ENST00000643483.1
ENST00000645174.1
CDS CCA 90 bp CTGCAATGGTCACACTCCAAACGTGCTGATGGTTTACGAAGTTCCTaGAATGCTTCCATTCTTCTGTCTGTTACCAACACACACGGTTAT +
Preference number: 5 (lower is better)
Translates to: LQWSHSKRADGLRSS*NASILLSVTNTHGY
Trigger: ATAACCGTGTGTGTTGGTAACAGACAGAAGAATGGAAGCATTCCAGGAACTTCGTAAACCATCAGCACGTTTGGAGTGTGACCATTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361283.4
ENST00000463003.2
ENST00000643483.1
ENST00000645174.1
CDS CCA 90 bp CTGCAATGGTCACACTCCAAACGTGCTGATGGTTTACGAAGTTCCTaGAATGCTTCCATTCTTCTGTCTGCTGTCTTACTAGACACCTTA +
Preference number: 5 (lower is better)
Translates to: LQWSHSKRADGLRSS*NASILLSAVLLDTL
Trigger: TAAGGTGTCTAGTAAGACAGCAGACAGAAGAATGGAAGCATTCCAGGAACTTCGTAAACCATCAGCACGTTTGGAGTGTGACCATTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644294.1
CDS-3UTR CAA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTAGTGGTGGGCCGGGTTaGCGAAGCTCTGGAGACACT +
Preference number: 5 (lower is better)
Translates to: NPETPTFHDIKANKHLEASGGPG*RSSGDT
Trigger: AGTGTCTCCAGAGCTTCGCAAACCCGGCCCACCACT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTTTTGGTTCTGCTGAATaGCAGGGTATTTTCTGGTGT +
Preference number: 5 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCFGSAE*QGIFWC
Trigger: ACACCAGAAAATACCCTGCAATTCAGCAGAACCAAA...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTGTTTCTGTGTTTCCATaGAAAGGGCAGGTATGGATT +
Preference number: 5 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCVSVFP*KGQVWI
Trigger: AATCCATACCTGCCCTTTCAATGGAAACACAGAAAC...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACGATGATGCTGAAGGATaGGATTTCCAAGGCCTAGGG +
Preference number: 5 (lower is better)
Translates to: QMLILSNTTETVKHGTPYDDAEG*DFQGLG
Trigger: CCCTAGGCCTTGGAAATCCAATCCTTCAGCATCATC...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAACTGTGTTATCAAATTaGCTGCTCCTCCAGTGGCGG +
Preference number: 5 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKTVLSN*LLLQWR
Trigger: CCGCCACTGGAGGAGCAGCAAATTTGATAACACAGT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTTGTAATCTCAGCACTTaGGGAGGCCGGGCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: NPETPTFHDIKANKHLEACNLST*GGRAGR
Trigger: TCTGCCTGCCCGGCCTCCCAAAGTGCTGAGATTACA...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR CAA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGATGATGCTGAAGGATaGGATTTCCAAGGCCTAGGG +
Preference number: 5 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKDDAEG*DFQGLG
Trigger: CCCTAGGCCTTGGAAATCCAATCCTTCAGCATCATC...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTATATCTGAGGCTGCTTaGGGGGACTCAGATGGCCCA +
Preference number: 5 (lower is better)
Translates to: NPETPTFHDIKANKHLEAISEAA*GDSDGP
Trigger: TGGGCCATCTGAGTCCCCCAAAGCAGCCTCAGATAT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCGGAAAAAGGGCACGTTaGCGTGCTTCTGGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLGKRAR*RASGEA
Trigger: TGCTTCTCCAGAAGCACGCAAACGTGCCCTTTTTCC...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp AGACTTTCAGTTCCTACTTATCAACCTGGTCTTAAGCCCCAACAGGCGACATGTCATGTGCTTTATACTTaGACTCTCAAACTCCGAGTA +
Preference number: 5 (lower is better)
Translates to: RLSVPTYQPGLKPQQATCHVLYT*TLKLRV
Trigger: TACTCGGAGTTTGAGAGTCAAAGTATAAAGCACATG...ACATGTCGCCTGTTGGGGCTTAAGACCAGGTTGATAAGTAGGAACTGAAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR CAA 90 bp GACAAGAAAGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGACACTTATCTTTCACTaGTCTCCTGTGGGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: DKKDLKSHLSFTCLLWEKTLIFH*SPVGEG
Trigger: GCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGT...CTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCTTTCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 90 bp TTGTTCTCTTTGCTAAAATCAATGGATTCCACATCAACCTGCTCTTaGTCACTGCTTGATTCCTGGCCCTTAATATCCATCGCATCCAAA +
Preference number: 5 (lower is better)
Translates to: LFSLLKSMDSTSTCS*SLLDSWPLISIASK
Trigger: TTTGGATGCGATGGATATTAAGGGCCAGGAATCAAGCAGTGATCAAGAGCAGGTTGATGTGGAATCCATTGATTTTAGCAAAGAGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 90 bp TGTGAGCCTGACTCTAGAATTAGCTATTGCATGTGCTTTATACTTTaGCTCTCAAACTCCGAGTACAAAAGTCCTCAGCACACAAAGATG +
Preference number: 5 (lower is better)
Translates to: CEPDSRISYCMCFIL*LSNSEYKSPQHTKM
Trigger: CATCTTTGTGTGCTGAGGACTTTTGTACTCGGAGTTTGAGAGTCAAAGTATAAAGCACATGCAATAGCTAATTCTAGAGTCAGGCTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR CAA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACGTTTCTGTGTTTCCATaGAAAGGGCAGGTATGGATT +
Preference number: 5 (lower is better)
Translates to: QMLILSNTTETVKHGTPYVSVFP*KGQVWI
Trigger: AATCCATACCTGCCCTTTCAATGGAAACACAGAAAC...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACAAACAGGGACTGATTTaGGAGGTTCAGGAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: QMLILSNTTETVKHGTPYKQGLI*EVQEKK
Trigger: TTTCTTCTCCTGAACCTCCAAAATCAGTCCCTGTTT...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTACACTTATCTTTCACTaGTCTCCTGTGGGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: NPETPTFHDIKANKHLEATLIFH*SPVGEG
Trigger: GCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGT...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS GCA 90 bp ACAAACACCTTTGTAGAACAAATATTCACACTGTGTTATCAAATTTaGTGCTCCTCCAGTGGCGGTTCAAGAGCTTCCATTAGCTTTTTA +
Preference number: 5 (lower is better)
Translates to: TNTFVEQIFTLCYQI*CSSSGGSRASISFL
Trigger: TAAAAAGCTAATGGAAGCTCTTGAACCGCCACTGGAGGAGCAGCAAATTTGATAACACAGTGTGAATATTTGTTCTACAAAGGTGTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACACATTAGAGTACATCTaGCTGGTGAAGAAGCATTTA +
Preference number: 5 (lower is better)
Translates to: QMLILSNTTETVKHGTPYTLEYI*LVKKHL
Trigger: TAAATGCTTCTTCACCAGCAAGATGTACTCTAATGT...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp AGATCTAAAATCACACTTATCTTTCACTTGTCTCCTGTGGGAGAAGGCTGCAAAACATTAGAGTACATCTaGCTGGTGAAGAAGCATTTA +
Preference number: 5 (lower is better)
Translates to: RSKITLIFHLSPVGEGCKTLEYI*LVKKHL
Trigger: TAAATGCTTCTTCACCAGCAAGATGTACTCTAATGT...TTTGCAGCCTTCTCCCACAGGAGACAAGTGAAAGATAAGTGTGATTTTAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCTTTGGTTCTGCTGAATaGCAGGGTATTTTCTGGTGT +
Preference number: 5 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLFGSAE*QGIFWC
Trigger: ACACCAGAAAATACCCTGCAATTCAGCAGAACCAAA...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp ATTAGTTCCACACACAGATACACTTTAACTGAATGCTTTGAGTACAACTTGCTCTCTGAGCTCTCTTGGTaGTCTTTCTTGAGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: ISSTHRYTLTECFEYNLLSELSW*SFLSFF
Trigger: AAAGAAGCTCAAGAAAGACAACCAAGAGAGCTCAGA...GAGCAAGTTGTACTCAAAGCATTCAGTTAAAGTGTATCTGTGTGTGGAACTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS-3UTR CAA 90 bp CAAATGCTCATTCTTAGTAACACAACTGAGACAGTGAAACACGGTACACCATACGAACACCTTCCCTTATaGACGGTAATGATATTTACT +
Preference number: 5 (lower is better)
Translates to: QMLILSNTTETVKHGTPYEHLPL*TVMIFT
Trigger: AGTAAATATCATTACCGTCAATAAGGGAAGGTGTTC...GTATGGTGTACCGTGTTTCACTGTCTCAGTTGTGTTACTAAGAATGAGCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS-3UTR CAA 90 bp AACCCTGAGACTCCAACATTTCATGACATAAAAGCTAATAAACATCTAGAAGCTGCAGCTGGAACACAGTaGCCGGAAAACATGAATTTA +
Preference number: 5 (lower is better)
Translates to: NPETPTFHDIKANKHLEAAAGTQ*PENMNL
Trigger: TAAATTCATGTTTTCCGGCAACTGTGTTCCAGCTGC...AGCTTCTAGATGTTTATTAGCTTTTATGTCATGAAATGTTGGAGTCTCAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS GCA 90 bp AACACCTTTGTAGAACAAATATTCACACTGTGTTATCAAATTTGCTaGTCCTCCAGTGGCGGTTCAAGAGCTTCCATTAGCTTTTTATTT +
Preference number: 5 (lower is better)
Translates to: NTFVEQIFTLCYQIC*SSSGGSRASISFLF
Trigger: AAATAAAAAGCTAATGGAAGCTCTTGAACCGCCACTGGAGGAGCAGCAAATTTGATAACACAGTGTGAATATTTGTTCTACAAAGGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 90 bp ACTCTCAAACTCCGAGTACAAAAGTCCTCAGCACACAAAGATGAGTaGATATCAAAATTAAATCTTGGCTATTTAAGGATGAACAAGAGA +
Preference number: 5 (lower is better)
Translates to: TLKLRVQKSSAHKDE*ISKLNLGYLRMNKR
Trigger: TCTCTTGTTCATCCTTAAATAGCCAAGATTTAATTTTGATATTCACTCATCTTTGTGTGCTGAGGACTTTTGTACTCGGAGTTTGAGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS GCA 72 bp CCCTGCAGCGCAGCGGCCTCCCGAATGGCGACTGGATaGAGGAGCCGGGATCCGGGTGCGCGAGCGTGCGCG +
Preference number: 6 (lower is better)
Translates to: PCSAAASRMATG*RSRDPGARACA
Trigger: CGCGCACGCTCGCGCACCCGGATCCCGGCTCCTGCATCCAGTCGCCATTCGGGAGGCCGCTGCGCTGCAGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463003.2
ENST00000645174.1
ENST00000646956.1
CDS CCA 72 bp GCTCCGCGAGGCCCTGCAGCGCAGCGGCCTCCCGAATaGCGACTGGATGCAGGAGCCGGGATCCGGGTGCGC +
Preference number: 6 (lower is better)
Translates to: APRGPAAQRPPE*RLDAGAGIRVR
Trigger: GCGCACCCGGATCCCGGCTCCTGCATCCAGTCGCCATTCGGGAGGCCGCTGCGCTGCAGGGCCTCGCGGAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361283.4
ENST00000463003.2
ENST00000645174.1
ENST00000646956.1
CDS CCA 72 bp GAGGCCCTGCAGCGCAGCGGCCTCCCGAATGGCGACTaGATGCAGGAGCCGGGATCCGGGTGCGCGAGCGTG +
Preference number: 6 (lower is better)
Translates to: EALQRSGLPNGD*MQEPGSGCASV
Trigger: CACGCTCGCGCACCCGGATCCCGGCTCCTGCATCCAGTCGCCATTCGGGAGGCCGCTGCGCTGCAGGGCCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463003.2
ENST00000645174.1
ENST00000646956.1
CDS TCA 72 bp GGATGGCTTCCTTGGCTCAGGGGAGGTAGTCCGGGCTaGCTTCCGAGATTCTGGAGATGCAGCTGGGGATGG +
Preference number: 6 (lower is better)
Translates to: GWLPWLRGGSPG*LPRFWRCSWGW
Trigger: CCATCCCCAGCTGCATCTCCAGAATCTCGGAAGTCAGCCCGGACTACCTCCCCTGAGCCAAGGAAGCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CAA 72 bp GGACTACGGATCTCTGGGGATAGTGGTGGGCCGGGTTaGCGAAGCTCTGGAGACACTGGGGGAACTGCCTTC +
Preference number: 6 (lower is better)
Translates to: GLRISGDSGGPG*RSSGDTGGTAF
Trigger: GAAGGCAGTTCCCCCAGTGTCTCCAGAGCTTCGCAAACCCGGCCCACCACTATCCCCAGAGATCCGTAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CAA 90 bp GATCCTGCTGGACTACGGATCTCTGGGGATAGTGGTGGGCCGGGTTaGCGAAGCTCTGGAGACACTGGGGGAACTGCCTTCCAATGTTCA +
Preference number: 6 (lower is better)
Translates to: DPAGLRISGDSGGPG*RSSGDTGGTAFQCS
Trigger: TGAACATTGGAAGGCAGTTCCCCCAGTGTCTCCAGAGCTTCGCAAACCCGGCCCACCACTATCCCCAGAGATCCGTAGTCCAGCAGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 72 bp GACAGCAGGGAACGGCTTCCAAGGTTCAGGAGACTCTaGAGGGGATGGCTTCCTTGGCTCAGGGGAGGTAGT +
Preference number: 6 (lower is better)
Translates to: DSRERLPRFRRL*RGWLPWLRGGS
Trigger: ACTACCTCCCCTGAGCCAAGGAAGCCATCCCCTTCAGAGTCTCCTGAACCTTGGAAGCCGTTCCCTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CAA 72 bp CGTTTGCGTGCTTCTGGAGAAGCAGGAGGGGCTGTTTaGGCAGGCTCGGGAAACAGGGCAGGTTTTCTAGGC +
Preference number: 6 (lower is better)
Translates to: RLRASGEAGGAV*AGSGNRAGFLG
Trigger: GCCTAGAAAACCTGCCCTGTTTCCCGAGCCTGCCAAAACAGCCCCTCCTGCTTCTCCAGAAGCACGCAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 72 bp CTCAGTATCGATAGAGAGAACAGGCTTCCAGATATCTaGGGCTGCTTTGGGGGACTCAGATGGCCCAGAAGG +
Preference number: 6 (lower is better)
Translates to: LSIDRENRLPDI*GCFGGLRWPRR
Trigger: CCTTCTGGGCCATCTGAGTCCCCCAAAGCAGCCTCAGATATCTGGAAGCCTGTTCTCTCTATCGATACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CCA 72 bp ATGACTCAGGAGATGCAGGGGGAGACTTCCAGGAGCTaGGTGAGACTGATGAAGATTTCCAGGATGCAGAAG +
Preference number: 6 (lower is better)
Translates to: MTQEMQGETSRS*VRLMKISRMQK
Trigger: CTTCTGCATCCTGGAAATCTTCATCAGTCTCACCCAGCTCCTGGAAGTCTCCCCCTGCATCTCCTGAGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CAA 72 bp AGTGGTCTTCAAAAGGCAGGCATTCTACATGGCTTTTaGACTAAACCACAGCAAACAGCCGGTCCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: SGLQKAGILHGF*TKPQQTAGPAA
Trigger: CGCGGCCGGACCGGCTGTTTGCTGTGGTTTAGTCAAAAAGCCATGTAGAATGCCTGCCTTTTGAAGACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645174.1
CDS TCA 72 bp AAAGCTTCCAAAGATCTGGTGACCCTGAGGGTTTTCTaGGCTCTGGAGATCCTGCTGGACTACGGATCTCTG +
Preference number: 6 (lower is better)
Translates to: KASKDLVTLRVF*ALEILLDYGSL
Trigger: CAGAGATCCGTAGTCCAGCAGGATCTCCAGAGCTCAGAAAACCCTCAGGGTCACCAGATCTTTGGAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 72 bp GATGAGGCTGAAGGTGGCCCCAATGTTTCCGGGAAATaGGACTGCTTCTGGGGTTTGGGATTACTAAGAGTA +
Preference number: 6 (lower is better)
Translates to: DEAEGGPNVSGK*DCFWGLGLLRV
Trigger: TACTCTTAGTAATCCCAAACCCCAGAAGCAGTCTCATTTCCCGGAAACATTGGGGCCACCTTCAGCCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 72 bp AACAGGGGCAAGTTTCTGAGACTCACAAACAGGGACTaGTTTTGGAGGTTCAGGAGAAGAAACAGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: NRGKFLRLTNRD*FWRFRRRNRGR
Trigger: CCTGCCTCTGTTTCTTCTCCTGAACCTCCAAAATCAGTCCCTGTTTGTGAGTCTCAGAAACTTGCCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 72 bp CTTCTGGGGTTTGGGATTACTAAGAGTAGCCTTTACTaGCTCAGGAGATACAGGGGCAGGTTTCTGTGGTTC +
Preference number: 6 (lower is better)
Translates to: LLGFGITKSSLY*LRRYRGRFLWF
Trigger: GAACCACAGAAACCTGCCCCTGTATCTCCTGAGTCAGTAAAGGCTACTCTTAGTAATCCCAAACCCCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS TCA 72 bp CCTCTATGCATGGGACATTCCAGCAGAGATCCTGAATaGTGTGAAGGCGCATACCAACCAAAGGGCAAATCA +
Preference number: 6 (lower is better)
Translates to: PLCMGHSSRDPE*CEGAYQPKGKS
Trigger: TGATTTGCCCTTTGGTTGGTATGCGCCTTCACATCATTCAGGATCTCTGCTGGAATGTCCCATGCATAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS TCA 72 bp GCCTCTGAAACTGCAATGGTCACACTCCAAACGTGCTaGTGGTTTACGAAGTTCCTGGAATGCTTCCATTCT +
Preference number: 6 (lower is better)
Translates to: ASETAMVTLQTC*WFTKFLECFHS
Trigger: AGAATGGAAGCATTCCAGGAACTTCGTAAACCATCAGCACGTTTGGAGTGTGACCATTGCAGTTTCAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361283.4
ENST00000463003.2
ENST00000643483.1
ENST00000644294.1
ENST00000645174.1
CDS TCA 72 bp TCAGGGAAATCAAGTGAAGCAGGAGAAGTTTTCCGCTaGTCAGGAGAAAGCTTCCAAAGATCTGGTGACCCT +
Preference number: 6 (lower is better)
Translates to: SGKSSEAGEVFR*SGESFQRSGDP
Trigger: AGGGTCACCAGATCTTTGGAAGCTTTCTCCTGATCAGCGGAAAACTTCTCCTGCTTCACTTGATTTCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CCA 72 bp AGTGATGTAGAGGCCGTTGGAAAAGACCTCTATGCATaGGACATTCCAGCAGAGATCCTGAATGATGTGAAG +
Preference number: 6 (lower is better)
Translates to: SDVEAVGKDLYA*DIPAEILNDVK
Trigger: CTTCACATCATTCAGGATCTCTGCTGGAATGTCCCATGCATAGAGGTCTTTTCCAACGGCCTCTACATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643483.1
CDS CCA 72 bp TCACACTCCAAACGTGCTGATGGTTTACGAAGTTCCTaGAATGCTTCCATTCTTCTGTCTGTTACCAACACA +
Preference number: 6 (lower is better)
Translates to: SHSKRADGLRSS*NASILLSVTNT
Trigger: TGTGTTGGTAACAGACAGAAGAATGGAAGCATTCCAGGAACTTCGTAAACCATCAGCACGTTTGGAGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361283.4
ENST00000463003.2
ENST00000643483.1
ENST00000645174.1
CDS CAA 90 bp CTGAACCAAGTTTCTGTGTTTCCATTGAAAGGGCAGGTATGGATTTaGGTTCTGCTGAATTGCAGGGTATTTTCTGGTGTTCAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: LNQVSVFPLKGQVWI*VLLNCRVFSGVQEE
Trigger: CTCTTCCTGAACACCAGAAAATACCCTGCAATTCAGCAGAACCAAAATCCATACCTGCCCTTTCAATGGAAACACAGAAACTTGGTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361283.4
ENST00000463003.2
ENST00000643483.1
ENST00000644294.1
CDS CAA 90 bp TTGGCGATTCTGGAGACAAAACTGAACCAAGTTTCTGTGTTTCCATaGAAAGGGCAGGTATGGATTTTGGTTCTGCTGAATTGCAGGGTA +
Preference number: 6 (lower is better)
Translates to: LAILETKLNQVSVFP*KGQVWILVLLNCRV
Trigger: TACCCTGCAATTCAGCAGAACCAAAATCCATACCTGCCCTTTCAATGGAAACACAGAAACTTGGTTCAGTTTTGTCTCCAGAATCGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361283.4
ENST00000643483.1
ENST00000644294.1
CDS GCA 72 bp GTAGAACAAATATTCACACTGTGTTATCAAATTTGCTaGTCCTCCAGTGGCGGTTCAAGAGCTTCCATTAGC +
Preference number: 6 (lower is better)
Translates to: VEQIFTLCYQIC*SSSGGSRASIS
Trigger: GCTAATGGAAGCTCTTGAACCGCCACTGGAGGAGCAGCAAATTTGATAACACAGTGTGAATATTTGTTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CAA 72 bp GTTTCTGTGTTTCCATTGAAAGGGCAGGTATGGATTTaGGTTCTGCTGAATTGCAGGGTATTTTCTGGTGTT +
Preference number: 6 (lower is better)
Translates to: VSVFPLKGQVWI*VLLNCRVFSGV
Trigger: AACACCAGAAAATACCCTGCAATTCAGCAGAACCAAAATCCATACCTGCCCTTTCAATGGAAACACAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361283.4
ENST00000463003.2
ENST00000643483.1
ENST00000644294.1
CDS CAA 90 bp TCACTACTACTAAGCTCAGCGTCTGAGCTCTCTTGGTTGTCTTTCTaGAGCTTCTTTGAGGAAGGAAATAAAGTATCTTCTAAGAGTTTC +
Preference number: 6 (lower is better)
Translates to: SLLLSSASELSWLSF*SFFEEGNKVSSKSF
Trigger: GAAACTCTTAGAAGATACTTTATTTCCTTCCTCAAAGAAGCTCAAGAAAGACAACCAAGAGAGCTCAGACGCTGAGCTTAGTAGTAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CAA 90 bp AACTGTAGCACATTTCTAGACTGCTCTGGACTAGTCATGTCCATTTaGTTCTCTTTGCTAAAATCAATGGATTCCACATCAACCTGCTCT +
Preference number: 6 (lower is better)
Translates to: NCSTFLDCSGLVMSI*FSLLKSMDSTSTCS
Trigger: AGAGCAGGTTGATGTGGAATCCATTGATTTTAGCAAAGAGAACAAAATGGACATGACTAGTCCAGAGCAGTCTAGAAATGTGCTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS GCA 72 bp TTTGTAGAACAAATATTCACACTGTGTTATCAAATTTaGTGCTCCTCCAGTGGCGGTTCAAGAGCTTCCATT +
Preference number: 6 (lower is better)
Translates to: FVEQIFTLCYQI*CSSSGGSRASI
Trigger: AATGGAAGCTCTTGAACCGCCACTGGAGGAGCAGCAAATTTGATAACACAGTGTGAATATTTGTTCTACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CCA 72 bp AACCAAGTTTCTGTGTTTCCATTGAAAGGGCAGGTATaGATTTTGGTTCTGCTGAATTGCAGGGTATTTTCT +
Preference number: 6 (lower is better)
Translates to: NQVSVFPLKGQV*ILVLLNCRVFS
Trigger: AGAAAATACCCTGCAATTCAGCAGAACCAAAATCCATACCTGCCCTTTCAATGGAAACACAGAAACTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361283.4
ENST00000463003.2
ENST00000643483.1
ENST00000644294.1
CDS CAA 90 bp ATCCATTTCATCACAAAATTCTGGATGGATGGTACCCATATGGATTaGTACATTTTCATAGTCTGTGCCTCTGAAACTGCAATGGTCACA +
Preference number: 6 (lower is better)
Translates to: IHFITKFWMDGTHMD*YIFIVCASETAMVT
Trigger: TGTGACCATTGCAGTTTCAGAGGCACAGACTATGAAAATGTACAAATCCATATGGGTACCATCCATCCAGAATTTTGTGATGAAATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361283.4
ENST00000463003.2
ENST00000643483.1
ENST00000644294.1
ENST00000645174.1
CDS CAA 72 bp ACATTTCTAGACTGCTCTGGACTAGTCATGTCCATTTaGTTCTCTTTGCTAAAATCAATGGATTCCACATCA +
Preference number: 6 (lower is better)
Translates to: TFLDCSGLVMSI*FSLLKSMDSTS
Trigger: TGATGTGGAATCCATTGATTTTAGCAAAGAGAACAAAATGGACATGACTAGTCCAGAGCAGTCTAGAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361283.4
ENST00000643483.1
CDS CAA 72 bp TTCTCTTTAATGAGAAAGACTGAACACCTTCCCTTATaGACGGTAATGATATTTACTCCTCCTCAAAGAACA +
Preference number: 6 (lower is better)
Translates to: FSLMRKTEHLPL*TVMIFTPPQRT
Trigger: TGTTCTTTGAGGAGGAGTAAATATCATTACCGTCAATAAGGGAAGGTGTTCAGTCTTTCTCATTAAAGAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643483.1