Pregenerated sensors for CH25H (Homo sapiens)
Ensembl gene IDs: ENSG00000138135Ensembl transcript IDs: ENST00000371852.4
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCCTCTTCATTCAAGTGTaGAAGGCACAGCAGTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCLFIQV*KAQQSR Trigger: TCGGGACTGCTGTGCCTTTCACACTTGAATGAAGAG...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| 3UTR TCA 72 bp | AAATATATAGCTCAGGTGTTTCTCTTCATTCAAGTGTaGAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCC | + |
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Preference number: 3 (lower is better) Translates to: KYIAQVFLFIQV*KAQQSRVLGAP Trigger: GGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGAATGAAGAGAAACACCTGAGCTATATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | TCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACACAGCTGCCCGGAGCTaGAAAGGACCTGGGGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: SSVKGTAVPSLRGTHRSHTAARS*KGPGGR Trigger: CCGACCCCCAGGTCCTTTGCAGCTCCGGGCAGCTGT...GTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | TCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACGCCACATCACCGCGCTaGGACAGATGCAGTCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSVKGTAVPSLRGTHRSHATSPR*DRCSPQ Trigger: CTGCGGACTGCATCTGTCCCAGCGCGGTGATGTGGC...GTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | TCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACAGGCAAGGTAGCAGCTaGTGCGCGGATGGCGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSVKGTAVPSLRGTHRSHRQGSS*CADGEK Trigger: CTTCTCGCCATCCGCGCAGCAGCTGCTACCTTGCCT...GTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | TCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACCAAGGTAGCAGCTGCTaGGCGGATGGCGAGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSVKGTAVPSLRGTHRSHQGSSC*ADGEKS Trigger: TGACTTCTCGCCATCCGCGCAGCAGCTGCTACCTTG...GTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | TTCTCCTGCCTCCTTTTCTCTAACAACCCCCAACAGAACACCCTACACCCAGATGCAGGAGGGCCGGGCTaGGGGCCCAATGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: FSCLLFSNNPQQNTLHPDAGGPG*GPNAAA Trigger: CGCTGCTGCATTGGGCCCGCAGCCCGGCCCTCCTGC...ATCTGGGTGTAGGGTGTTCTGTTGGGGGTTGTTAGAGAAAAGGAGGCAGGAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | TCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACTGGTGGTGCACCTTGTaGAAGGTGCGGTACAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSVKGTAVPSLRGTHRSHWWCTL*KVRYSQ Trigger: CTGGCTGTACCGCACCTTCCACAAGGTGCACCACCA...GTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR TCA 90 bp | TCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACGGCACCCGAGCAGTGTaGCGTTCATCATGTCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SSVKGTAVPSLRGTHRSHGTRAV*RSSCRR Trigger: TCTTCGACATGATGAACGTCACACTGCTCGGGTGCC...GTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | GTTTCTCTTCATTCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCGGGCTGCGGGCCCAATaGAGCAGCGTCACGGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VSLHSSVKGTAVPSLRGTGLRAQ*SSVTGN Trigger: GTTCCCCGTGACGCTGCTGCATTGGGCCCGCAGCCC...GGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGAATGAAGAGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | TCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACTTGTGGTGCAGCAGGTaGCACACGAAGAACTCCATG | + |
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Preference number: 4 (lower is better) Translates to: SSVKGTAVPSLRGTHRSHLWCSR*HTKNSM Trigger: CATGGAGTTCTTCGTGTGGCACCTGCTGCACCACAA...GTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | GTTTCTCTTCATTCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCAGGGTGGTGAGCGGGTaGCACCCGAGCAGTGTGACG | + |
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Preference number: 4 (lower is better) Translates to: VSLHSSVKGTAVPSLRGTRVVSG*HPSSVT Trigger: CGTCACACTGCTCGGGTGCCACCCGCTCACCACCCT...GGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGAATGAAGAGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | GTTTCTCTTCATTCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCGGCTGCAGGAACAGCTaGCCGGAGCTGCAAAGGACC | + |
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Preference number: 4 (lower is better) Translates to: VSLHSSVKGTAVPSLRGTGCRNS*PELQRT Trigger: GGTCCTTTGCAGCTCCGGGCAGCTGTTCCTGCAGCC...GGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGAATGAAGAGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | TTCTCCTGCCTCCTTTTCTCTAACAACCCCCAACAGAACACCCTACACCCAGATCCGCGCTGGGACAGATaGAGTCCGCAGCGTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FSCLLFSNNPQQNTLHPDPRWDR*SPQRSQ Trigger: CTGGGAACGCTGCGGACTGCATCTGTCCCAGCGCGG...ATCTGGGTGTAGGGTGTTCTGTTGGGGGTTGTTAGAGAAAAGGAGGCAGGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | GTTTCTCTTCATTCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCAGCCAGGGCACCTTGTaGTGCAGCAGGTGCCACACG | + |
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Preference number: 4 (lower is better) Translates to: VSLHSSVKGTAVPSLRGTSQGTL*CSRCHT Trigger: CGTGTGGCACCTGCTGCACCACAAGGTGCCCTGGCT...GGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGAATGAAGAGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | TTCTCCTGCCTCCTTTTCTCTAACAACCCCCAACAGAACACCCTACACCCAGATGGGTCGGAGCAGTTGTaGCAGCTCATTGCGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FSCLLFSNNPQQNTLHPDGSEQL*QLIARL Trigger: CAGCCTCGCAATGAGCTGCCACAACTGCTCCGACCC...ATCTGGGTGTAGGGTGTTCTGTTGGGGGTTGTTAGAGAAAAGGAGGCAGGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | TTCTCCTGCCTCCTTTTCTCTAACAACCCCCAACAGAACACCCTACACCCAGATGAGCTGCAAAGGACCTaGGGGTCGGAGCAGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSCLLFSNNPQQNTLHPDELQRT*GSEQLW Trigger: CCACAACTGCTCCGACCCCCAGGTCCTTTGCAGCTC...ATCTGGGTGTAGGGTGTTCTGTTGGGGGTTGTTAGAGAAAAGGAGGCAGGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | TTCTCCTGCCTCCTTTTCTCTAACAACCCCCAACAGAACACCCTACACCCAGATCAGCTGCTGCGCGGATaGCGAGAAGTCAGGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: FSCLLFSNNPQQNTLHPDQLLRG*REVRVD Trigger: ATCCACCCTGACTTCTCGCCATCCGCGCAGCAGCTG...ATCTGGGTGTAGGGTGTTCTGTTGGGGGTTGTTAGAGAAAAGGAGGCAGGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | TTCTCCTGCCTCCTTTTCTCTAACAACCCCCAACAGAACACCCTACACCCAGATGTTGTGGCAGCTCATTaGGAGGCTGTGCAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FSCLLFSNNPQQNTLHPDVVAAH*EAVQGS Trigger: GCTGCCTTGCACAGCCTCGCAATGAGCTGCCACAAC...ATCTGGGTGTAGGGTGTTCTGTTGGGGGTTGTTAGAGAAAAGGAGGCAGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | TTCTCCTGCCTCCTTTTCTCTAACAACCCCCAACAGAACACCCTACACCCAGATCAGAACAGGATGTGGTaGAGCAGCAGGAGCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: FSCLLFSNNPQQNTLHPDQNRMW*SSRSSS Trigger: CGAGCTGCTCCTGCTGCTGCACCACATCCTGTTCTG...ATCTGGGTGTAGGGTGTTCTGTTGGGGGTTGTTAGAGAAAAGGAGGCAGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | TTCTCCTGCCTCCTTTTCTCTAACAACCCCCAACAGAACACCCTACACCCAGATGCTCATATACTGCGTTaGCAGCGCGAACGAGGACGA | + |
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Preference number: 4 (lower is better) Translates to: FSCLLFSNNPQQNTLHPDAHILR*QRERGR Trigger: TCGTCCTCGTTCGCGCTGGCAACGCAGTATATGAGC...ATCTGGGTGTAGGGTGTTCTGTTGGGGGTTGTTAGAGAAAAGGAGGCAGGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | GTTTCTCTTCATTCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCAACGAGGACGAGTTCTaGTGGTGCACCTTGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VSLHSSVKGTAVPSLRGTNEDEF*WCTLWK Trigger: CTTCCACAAGGTGCACCACCAGAACTCGTCCTCGTT...GGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGAATGAAGAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | TCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACAGGTACTATAATTCTTaGTCACTGTCCAGCAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SSVKGTAVPSLRGTHRSHRYYNS*SLSSRN Trigger: GTTTCTGCTGGACAGTGACCAAGAATTATAGTACCT...GTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR TCA 90 bp | TCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACCAGTCAAAATACCAGTaGAACGGAAGTCAATACTTA | + |
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Preference number: 4 (lower is better) Translates to: SSVKGTAVPSLRGTHRSHQSKYQ*NGSQYL Trigger: TAAGTATTGACTTCCGTTTCACTGGTATTTTGACTG...GTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR TCA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCGGAAGGTCAGGGTGGTaGGCGGGTGGCACCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCGRSGW*AGGTRA Trigger: TGCTCGGGTGCCACCCGCTCACCACCCTGACCTTCC...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCTCCCAGCTCCTCAGGTaGTCCCAGAGGGGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCSQLLR*SQRGCR Trigger: CCTGCAGCCCCTCTGGGACCACCTGAGGAGCTGGGA...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCGACGAGTTCTGGTGGTaGACCTTGTGGAAGGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCDEFWW*TLWKVR Trigger: CCGCACCTTCCACAAGGTGCACCACCAGAACTCGTC...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR TCA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCAAGGGCACCAGTCTGTaGGTGGACCAAGGGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCKGTSL*VDQGKL Trigger: CAACTTCCCTTGGTCCACTCACAGACTGGTGCCCTT...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR GCA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCCAGACGCTCATATACTaGGTTGCCAGCGCGAACGAG | + |
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Preference number: 4 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCQTLIY*VASANE Trigger: CTCGTTCGCGCTGGCAACGCAGTATATGAGCGTCTG...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCGAGGACGAGTTCTGGTaGTGCACCTTGTGGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCEDEFW*CTLWKV Trigger: CACCTTCCACAAGGTGCACCACCAGAACTCGTCCTC...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCCAGATGTTGACCACGTaGAAGGTCAGGGTGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCQMLTT*KVRVVS Trigger: GCTCACCACCCTGACCTTCCACGTGGTCAACATCTG...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CCA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCGCACCAGTCTGTGAGTaGACCAAGGGAAGTTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCAPVCE*TKGSCS Trigger: GCTACAACTTCCCTTGGTCCACTCACAGACTGGTGC...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR TCA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCTCAAGGCTATTGAGGTaGGCTAGACTAAGAATACCA | + |
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Preference number: 4 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCSRLLR*ARLRIP Trigger: TGGTATTCTTAGTCTAGCTCACCTCAATAGCCTTGA...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 90 bp | TGCGTTGCCAGCGCGAACGAGGACGAGTTCTGGTGGTGCACCTTGTaGAAGGTGCGGTACAGCCAGGGCACCTTGTGGTGCAGCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: CVASANEDEFWWCTL*KVRYSQGTLWCSRC Trigger: GCACCTGCTGCACCACAAGGTGCCCTGGCTGTACCGCACCTTCCACAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 90 bp | GGTGCACCACACCCCCGTACCACCCGAAGGGCACCAGTCTGTGAGTaGACCAAGGGAAGTTGTAGCCGGAGTGGTCCTCCACGGAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: GAPHPRTTRRAPVCE*TKGSCSRSGPPRKA Trigger: GGCTTTCCGTGGAGGACCACTCCGGCTACAACTTCCCTTGGTCCACTCACAGACTGGTGCCCTTCGGGTGGTACGGGGGTGTGGTGCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 90 bp | CAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACATCACCGCGCTaGGACAGATGCAGTCCGCAGCGTTCCCAGTATTTTGTCCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: QSRVLGAPTAATSPR*DRCSPQRSQYFVPV Trigger: CACTGGGACAAAATACTGGGAACGCTGCGGACTGCATCTGTCCCAGCGCGGTGATGTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS GCA 90 bp | CTCATATACTGCGTTGCCAGCGCGAACGAGGACGAGTTCTGGTGGTaGACCTTGTGGAAGGTGCGGTACAGCCAGGGCACCTTGTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: LIYCVASANEDEFWW*TLWKVRYSQGTLWC Trigger: GCACCACAAGGTGCCCTGGCTGTACCGCACCTTCCACAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCAGTATATGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 90 bp | ACGCTCATATACTGCGTTGCCAGCGCGAACGAGGACGAGTTCTGGTaGTGCACCTTGTGGAAGGTGCGGTACAGCCAGGGCACCTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: TLIYCVASANEDEFW*CTLWKVRYSQGTLW Trigger: CCACAAGGTGCCCTGGCTGTACCGCACCTTCCACAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCAGTATATGAGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 90 bp | CAGACGCTCATATACTGCGTTGCCAGCGCGAACGAGGACGAGTTCTaGTGGTGCACCTTGTGGAAGGTGCGGTACAGCCAGGGCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: QTLIYCVASANEDEF*WCTLWKVRYSQGTL Trigger: CAAGGTGCCCTGGCTGTACCGCACCTTCCACAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCAGTATATGAGCGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CAA 90 bp | TCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACAGTTGTGGCAGCTCATaGCGAGGCTGTGCAAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SSVKGTAVPSLRGTHRSHSCGSS*RGCARQ Trigger: CTGCCTTGCACAGCCTCGCAATGAGCTGCCACAACT...GTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 90 bp | TGGTGGTGCACCTTGTGGAAGGTGCGGTACAGCCAGGGCACCTTGTaGTGCAGCAGGTGCCACACGAAGAACTCCATGTCGAAGAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: WWCTLWKVRYSQGTL*CSRCHTKNSMSKSS Trigger: GCTACTCTTCGACATGGAGTTCTTCGTGTGGCACCTGCTGCACCACAAGGTGCCCTGGCTGTACCGCACCTTCCACAAGGTGCACCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS GCA 90 bp | TTGTGGAAGGTGCGGTACAGCCAGGGCACCTTGTGGTGCAGCAGGTaGCACACGAAGAACTCCATGTCGAAGAGTAGCAGGCAGAACAGG | + |
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Preference number: 5 (lower is better) Translates to: LWKVRYSQGTLWCSR*HTKNSMSKSSRQNR Trigger: CCTGTTCTGCCTGCTACTCTTCGACATGGAGTTCTTCGTGTGGCACCTGCTGCACCACAAGGTGCCCTGGCTGTACCGCACCTTCCACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS GCA 90 bp | GTCTTAGGGGCACCCACCGCAGCCACATCACCGCGCTGGGACAGATaGAGTCCGCAGCGTTCCCAGTATTTTGTCCCAGTGTGTAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: VLGAPTAATSPRWDR*SPQRSQYFVPVCKV Trigger: TACTTTACACACTGGGACAAAATACTGGGAACGCTGCGGACTGCATCTGTCCCAGCGCGGTGATGTGGCTGCGGTGGGTGCCCCTAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 90 bp | GAAAGCCAGATGTTGACCACGTGGAAGGTCAGGGTGGTGAGCGGGTaGCACCCGAGCAGTGTGACGTTCATCATGTCGAAGAAGCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: ESQMLTTWKVRVVSG*HPSSVTFIMSKKPK Trigger: TTTGGGCTTCTTCGACATGATGAACGTCACACTGCTCGGGTGCCACCCGCTCACCACCCTGACCTTCCACGTGGTCAACATCTGGCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CAA 90 bp | GTTTCTCTTCATTCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCGCTCATATACTGCGTaGCCAGCGCGAACGAGGACG | + |
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Preference number: 5 (lower is better) Translates to: VSLHSSVKGTAVPSLRGTRSYTA*PARTRT Trigger: CGTCCTCGTTCGCGCTGGCAACGCAGTATATGAGCG...GGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGAATGAAGAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS GCA 90 bp | GAAGAAGCCCAAAGAAAACAGTTCCCAGACGCTCATATACTGCGTTaGCAGCGCGAACGAGGACGAGTTCTGGTGGTGCACCTTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: EEAQRKQFPDAHILR*QRERGRVLVVHLVE Trigger: TTCCACAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCAGTATATGAGCGTCTGGGAACTGTTTTCTTTGGGCTTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS GCA 90 bp | ATGTCGAAGAAGCCCAAAGAAAACAGTTCCCAGACGCTCATATACTaGGTTGCCAGCGCGAACGAGGACGAGTTCTGGTGGTGCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: MSKKPKENSSQTLIY*VASANEDEFWWCTL Trigger: CAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCAGTATATGAGCGTCTGGGAACTGTTTTCTTTGGGCTTCTTCGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CAA 90 bp | TTCTCCTGCCTCCTTTTCTCTAACAACCCCCAACAGAACACCCTACACCCAGATTTCTGGTGGTGCACCTaGTGGAAGGTGCGGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: FSCLLFSNNPQQNTLHPDFWWCT*WKVRYS Trigger: GCTGTACCGCACCTTCCACAAGGTGCACCACCAGAA...ATCTGGGTGTAGGGTGTTCTGTTGGGGGTTGTTAGAGAAAAGGAGGCAGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CAA 90 bp | GTTTCTCTTCATTCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCGGCTTAGAAGGACACTaGGTATGCCCGCTCCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: VSLHSSVKGTAVPSLRGTGLEGH*VCPLPL Trigger: AAGAGGGAGCGGGCATACCAAGTGTCCTTCTAAGCC...GGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGAATGAAGAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CAA 90 bp | TCAAGTGTGAAAGGCACAGCAGTCCCGAGTCTTAGGGGCACCCACCGCAGCCACTTTTCCTCCATGAAATaGCTAGAGCACAACAAACAG | + |
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Preference number: 5 (lower is better) Translates to: SSVKGTAVPSLRGTHRSHFSSMK*LEHNKQ Trigger: CTGTTTGTTGTGCTCTAGCAATTTCATGGAGGAAAA...GTGGCTGCGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CAA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCTACAGCCAGGGCACCTaGTGGTGCAGCAGGTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCYSQGT*WCSRCH Trigger: GTGGCACCTGCTGCACCACAAGGTGCCCTGGCTGTA...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CAA 90 bp | TTCTCCTGCCTCCTTTTCTCTAACAACCCCCAACAGAACACCCTACACCCAGATAGCGTTCCCAGTATTTaGTCCCAGTGTGTAAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: FSCLLFSNNPQQNTLHPDSVPSI*SQCVKY Trigger: GTACTTTACACACTGGGACAAAATACTGGGAACGCT...ATCTGGGTGTAGGGTGTTCTGTTGGGGGTTGTTAGAGAAAAGGAGGCAGGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS-3UTR CAA 90 bp | ATAAGAAGGTACTATAATTCTTGGTCACTGTCCAGCAGAAACATGTTTGATTGCACGGAAAGCCAGATGTaGACCACGTGGAAGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: IRRYYNSWSLSSRNMFDCTESQM*TTWKVR Trigger: CCTGACCTTCCACGTGGTCAACATCTGGCTTTCCGT...GCAATCAAACATGTTTCTGCTGGACAGTGACCAAGAATTATAGTACCTTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 72 bp | GGCTGCAGGAACAGCTGCCCGGAGCTGCAAAGGACCTaGGGGTCGGAGCAGTTGTGGCAGCTCATTGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: GCRNSCPELQRT*GSEQLWQLIAR Trigger: CCTCGCAATGAGCTGCCACAACTGCTCCGACCCCCAGGTCCTTTGCAGCTCCGGGCAGCTGTTCCTGCAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS GCA 72 bp | TGCGTTGCCAGCGCGAACGAGGACGAGTTCTGGTGGTaGACCTTGTGGAAGGTGCGGTACAGCCAGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: CVASANEDEFWW*TLWKVRYSQGT Trigger: GGTGCCCTGGCTGTACCGCACCTTCCACAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CAA 72 bp | GCCAGCGCGAACGAGGACGAGTTCTGGTGGTGCACCTaGTGGAAGGTGCGGTACAGCCAGGGCACCTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: ASANEDEFWWCT*WKVRYSQGTLW Trigger: CCACAAGGTGCCCTGGCTGTACCGCACCTTCCACAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CAA 90 bp | TACTGCGTTGCCAGCGCGAACGAGGACGAGTTCTGGTGGTGCACCTaGTGGAAGGTGCGGTACAGCCAGGGCACCTTGTGGTGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: YCVASANEDEFWWCT*WKVRYSQGTLWCSR Trigger: CCTGCTGCACCACAAGGTGCCCTGGCTGTACCGCACCTTCCACAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS GCA 72 bp | GCACCCACCGCAGCCACATCACCGCGCTGGGACAGATaGAGTCCGCAGCGTTCCCAGTATTTTGTCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: APTAATSPRWDR*SPQRSQYFVPV Trigger: CACTGGGACAAAATACTGGGAACGCTGCGGACTGCATCTGTCCCAGCGCGGTGATGTGGCTGCGGTGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 72 bp | AGCGCGAACGAGGACGAGTTCTGGTGGTGCACCTTGTaGAAGGTGCGGTACAGCCAGGGCACCTTGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SANEDEFWWCTL*KVRYSQGTLWC Trigger: GCACCACAAGGTGCCCTGGCTGTACCGCACCTTCCACAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 72 bp | TACTGCGTTGCCAGCGCGAACGAGGACGAGTTCTGGTaGTGCACCTTGTGGAAGGTGCGGTACAGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: YCVASANEDEFW*CTLWKVRYSQG Trigger: GCCCTGGCTGTACCGCACCTTCCACAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 72 bp | CACCCCCGTACCACCCGAAGGGCACCAGTCTGTGAGTaGACCAAGGGAAGTTGTAGCCGGAGTGGTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HPRTTRRAPVCE*TKGSCSRSGPP Trigger: TGGAGGACCACTCCGGCTACAACTTCCCTTGGTCCACTCACAGACTGGTGCCCTTCGGGTGGTACGGGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 72 bp | GTCTTAGGGGCACCCACCGCAGCCACATCACCGCGCTaGGACAGATGCAGTCCGCAGCGTTCCCAGTATTTT | + |
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Preference number: 6 (lower is better) Translates to: VLGAPTAATSPR*DRCSPQRSQYF Trigger: AAAATACTGGGAACGCTGCGGACTGCATCTGTCCCAGCGCGGTGATGTGGCTGCGGTGGGTGCCCCTAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 72 bp | ACCTTGTGGAAGGTGCGGTACAGCCAGGGCACCTTGTaGTGCAGCAGGTGCCACACGAAGAACTCCATGTCG | + |
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Preference number: 6 (lower is better) Translates to: TLWKVRYSQGTL*CSRCHTKNSMS Trigger: CGACATGGAGTTCTTCGTGTGGCACCTGCTGCACCACAAGGTGCCCTGGCTGTACCGCACCTTCCACAAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CAA 90 bp | TTCTGGTGGTGCACCTTGTGGAAGGTGCGGTACAGCCAGGGCACCTaGTGGTGCAGCAGGTGCCACACGAAGAACTCCATGTCGAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: FWWCTLWKVRYSQGT*WCSRCHTKNSMSKS Trigger: ACTCTTCGACATGGAGTTCTTCGTGTGGCACCTGCTGCACCACAAGGTGCCCTGGCTGTACCGCACCTTCCACAAGGTGCACCACCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CCA 72 bp | ATGTTGACCACGTGGAAGGTCAGGGTGGTGAGCGGGTaGCACCCGAGCAGTGTGACGTTCATCATGTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: MLTTWKVRVVSG*HPSSVTFIMSK Trigger: CTTCGACATGATGAACGTCACACTGCTCGGGTGCCACCCGCTCACCACCCTGACCTTCCACGTGGTCAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CAA 90 bp | CGAAGAAGCCCAAAGAAAACAGTTCCCAGACGCTCATATACTGCGTaGCCAGCGCGAACGAGGACGAGTTCTGGTGGTGCACCTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: RRSPKKTVPRRSYTA*PARTRTSSGGAPCG Trigger: TCCACAAGGTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCAGTATATGAGCGTCTGGGAACTGTTTTCTTTGGGCTTCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS GCA 72 bp | CAAAGAAAACAGTTCCCAGACGCTCATATACTGCGTTaGCAGCGCGAACGAGGACGAGTTCTGGTGGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: QRKQFPDAHILR*QRERGRVLVVH Trigger: GTGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCAGTATATGAGCGTCTGGGAACTGTTTTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS GCA 72 bp | AAGCCCAAAGAAAACAGTTCCCAGACGCTCATATACTaGGTTGCCAGCGCGAACGAGGACGAGTTCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: KPKENSSQTLIY*VASANEDEFWW Trigger: CCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCAGTATATGAGCGTCTGGGAACTGTTTTCTTTGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CAA 72 bp | CCAAAGAAAACAGTTCCCAGACGCTCATATACTGCGTaGCCAGCGCGAACGAGGACGAGTTCTGGTGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PKKTVPRRSYTA*PARTRTSSGGA Trigger: TGCACCACCAGAACTCGTCCTCGTTCGCGCTGGCAACGCAGTATATGAGCGTCTGGGAACTGTTTTCTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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| CDS CAA 72 bp | GCTGGGACAGATGCAGTCCGCAGCGTTCCCAGTATTTaGTCCCAGTGTGTAAAGTACGGAGCGAAGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: AGTDAVRSVPSI*SQCVKYGAKLQ Trigger: CTGCAACTTCGCTCCGTACTTTACACACTGGGACAAAATACTGGGAACGCTGCGGACTGCATCTGTCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371852.4 |
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