RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CGN (Homo sapiens)

Ensembl gene IDs: ENSG00000143375

Ensembl transcript IDs: ENST00000271636.12, ENST00000416743.1, ENST00000427934.2, ENST00000464886.1, ENST00000467998.1, ENST00000473377.5, ENST00000502442.1, ENST00000505188.5

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGGGCACATGTGGTCAGAGAAGCCCCAAGGAAGGCCACAGGGACTaGCACCTTTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTC +
Preference number: 1 (lower is better)
Translates to: LGTCGQRSPKEGHRD*HLYFWNLCSQLSGL
Trigger: GAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAAAGGTGTCAGTCCCTGTGGCCTTCCTTGGGGCTTCTCTGACCACATGTGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR TCA 90 bp CAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTaGAGTTGGGCACATGTGGTCAGAGAAGCCCCAAGGAAGGCCACA +
Preference number: 1 (lower is better)
Translates to: QSQAPQKMRVPWFSY*SWAHVVREAPRKAT
Trigger: TGTGGCCTTCCTTGGGGCTTCTCTGACCACATGTGCCCAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR GCA 90 bp CCTTTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTaGAACCACCTTATAACCATATCCACAGTCACAGAGGAGGGAGAG +
Preference number: 1 (lower is better)
Translates to: PLLLEFVQPVVRAPR*NHLITISTVTEEGE
Trigger: CTCTCCCTCCTCTGTGACTGTGGATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR GCA 90 bp TTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTaGTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCT +
Preference number: 1 (lower is better)
Translates to: FVKTAFLLPPAPYTT*LGNMEVNHPPYLFP
Trigger: AGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR TCA 90 bp GAGATGAGGGAGGTGTCGGCACTTGAGGAAAAGGCTCAGTTGGCTTaGAATGTCCACTCCTACAGTGGAAAGTCCATCTATCAGCTTATT +
Preference number: 1 (lower is better)
Translates to: EMREVSALEEKAQLA*NVHSYSGKSIYQLI
Trigger: AATAAGCTGATAGATGGACTTTCCACTGTAGGAGTGGACATTTCAAGCCAACTGAGCCTTTTCCTCAAGTGCCGACACCTCCCTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR TCA 90 bp TACAACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACGGCAGCAGGGAAGGCTaGGGGCCCTGGCTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: YNLLRKYGGESSPLPLPYGSREG*GPWLGK
Trigger: TTTCCCCAGCCAGGGCCCTCAGCCTTCCCTGCTGCC...GTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR CAA 90 bp TCAGAGAAGCCCCAAGGAAGGCCACAGGGACTGACACCTTTACTTTaGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCAC +
Preference number: 2 (lower is better)
Translates to: SEKPQGRPQGLTPLL*EFVQPVVRAPRCNH
Trigger: GTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAAAGGTGTCAGTCCCTGTGGCCTTCCTTGGGGCTTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR GCA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCGAGCAGAGCAGCACTTaGTGGGATAGGCCTCGAGCC +
Preference number: 2 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIEQSST*WDRPRA
Trigger: GGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTC...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR TCA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAGGTGTCGGCACTTaGGGAAAAGGCTCAGTTGGC +
Preference number: 2 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYGGVGT*GKGSVG
Trigger: GCCAACTGAGCCTTTTCCTCAAGTGCCGACACCTCC...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CCA 90 bp ACATTACAAGTCATTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACCAGAGCAGCACTTGCTaGGATAGGCCTCGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: TLQVICENSLPPATGSLYQSSTC*DRPRAW
Trigger: CCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTG...GTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CCA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATGCAGAACCCAGGGTaGGCAGAGCAGAGCAGCACT +
Preference number: 2 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLMQNPG*AEQSST
Trigger: AGTGCTGCTCTGCTCTGCCCACCCTGGGTTCTGCAT...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CCA 90 bp CAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTGATGGGGACTACCACATaGGCCCCATACTTGTGCAAA +
Preference number: 2 (lower is better)
Translates to: QRNPNSSLNQSLGQQGRLMGTTT*APYLCK
Trigger: TTTGCACAAGTATGGGGCCCATGTGGTAGTCCCCAT...CAGCCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CCA 90 bp AACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGAACTGGAGGGGTATaGGGACTACCACATGGGCCC +
Preference number: 2 (lower is better)
Translates to: NLLRKYGGESSPLPLPYQGTGGV*GLPHGP
Trigger: GGGCCCATGTGGTAGTCCCCATACCCCTCCAGTTCC...CTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CCA 90 bp ACATTACAAGTCATTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACGCTGAGGGCCCTGGCTaGGGAAAAGCTGGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: TLQVICENSLPPATGSLYAEGPG*GKAGLW
Trigger: CCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTCAGC...GTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR CAA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATaGAAGTTGGGCACATGTGGTCAGAGAAGCCCCAAGGAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: SEPSTSENEGPLVLL*KLGTCGQRSPKEGH
Trigger: GTGGCCTTCCTTGGGGCTTCTCTGACCACATGTGCCCAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR TCA 90 bp CAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTGAGAGTGGAAGGAAAATaGGTTGCAGGAATCCAGGGA +
Preference number: 2 (lower is better)
Translates to: QRNPNSSLNQSLGQQGRLRVEGK*VAGIQG
Trigger: TCCCTGGATTCCTGCAACTCATTTTCCTTCCACTCT...CAGCCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR CAA 90 bp CAAAGCCCTGAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTaGGTTCTCTTATTGAAGTTGGGCACATGTGGTCAGAGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: QSPESEPSTSENEGP*VLLLKLGTCGQRSP
Trigger: GGGGCTTCTCTGACCACATGTGCCCAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTCAGGGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR TCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATACCTTGGCTAAGGCACTaGCAGGAAAAATGCAAGGTA +
Preference number: 2 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQIPWLRH*QEKCKV
Trigger: TACCTTGCATTTTTCCTGTCAGTGCCTTAGCCAAGG...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR TCA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCCCCGCCACTTTATCATaGCCCTACCAAAGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIPATLS*PYQSPS
Trigger: AGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGG...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR GCA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATTGGGCCCCATACTTGTaGAAAGAAATGGGTAGAGCC +
Preference number: 2 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYWAPYL*KEMGRA
Trigger: GGCTCTACCCATTTCTTTGCACAAGTATGGGGCCCA...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CCA 90 bp CTTGCCTTGGCTAAGGCACTGACAGGAAAAATGCAAGGTAGGAATGGCAAAGAGCACCCTGCTCCAGAGTaGAAGGAAAATGAGTTGCAG +
Preference number: 2 (lower is better)
Translates to: LALAKALTGKMQGRNGKEHPAPE*KENELQ
Trigger: CTGCAACTCATTTTCCTTCCACTCTGGAGCAGGGTG...CTCTTTGCCATTCCTACCTTGCATTTTTCCTGTCAGTGCCTTAGCCAAGGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CCA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATTGGCTGGGGAAAAGCTaGTCTTTGGAGAGGTATGAA +
Preference number: 2 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYWLGKS*SLERYE
Trigger: TTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCA...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CCA 90 bp GTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCCACATTAGGTCTGAATAATTaGGTCACCCATAGGAATGCA +
Preference number: 2 (lower is better)
Translates to: VQPVVRAPRCNHLITISTLGLNN*VTHRNA
Trigger: TGCATTCCTATGGGTGACCCAATTATTCAGACCTAA...TGTGGATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CCA 90 bp TTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAGGTGAATACTTGTGCAAAGAAATaGGTAGAGCCATGCCTGCAT +
Preference number: 2 (lower is better)
Translates to: FLLPPAPYTTCLGNMEVNTCAKK*VEPCLH
Trigger: ATGCAGGCATGGCTCTACCCATTTCTTTGCACAAGT...ATTCACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR TCA 90 bp TACAACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACAAGGCTCAGTTGGCTTaGAATGTCCACTCCTACAGT +
Preference number: 2 (lower is better)
Translates to: YNLLRKYGGESSPLPLPYKAQLA*NVHSYS
Trigger: ACTGTAGGAGTGGACATTTCAAGCCAACTGAGCCTT...GTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR TCA 90 bp TGCAGATATAAAAAGCAAGAAGAGCATCCTTATCTCCTTGCCTTGGCTAAGGCACATAGGGTATTTCCCTaGGCCTTAGGGTTAAGGGCT +
Preference number: 2 (lower is better)
Translates to: CRYKKQEEHPYLLALAKAHRVFP*ALGLRA
Trigger: AGCCCTTAACCCTAAGGCTCAGGGAAATACCCTATG...TGCCTTAGCCAAGGCAAGGAGATAAGGATGCTCTTCTTGCTTTTTATATCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR GCA 90 bp TACAACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACTACTTTTGGAATTTGTaGAGCCAGTTGTCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: YNLLRKYGGESSPLPLPYYFWNL*SQLSGL
Trigger: GAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTA...GTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CCA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGAGGAAAAGGCTCAGTTaGCTTGAAATGTCCACTCCT +
Preference number: 2 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLRKRLS*LEMSTP
Trigger: AGGAGTGGACATTTCAAGCCAACTGAGCCTTTTCCT...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR CAA 90 bp ATGTGCAGATATAAAAAGCAAGAAGAGCATCCTTATCTCCTTGCCTaGGCTAAGGCACTGACAGGAAAAATGCAAGGTAGGAATGGCAAA +
Preference number: 2 (lower is better)
Translates to: MCRYKKQEEHPYLLA*AKALTGKMQGRNGK
Trigger: TTTGCCATTCCTACCTTGCATTTTTCCTGTCAGTGCCTTAGCCAAGGCAAGGAGATAAGGATGCTCTTCTTGCTTTTTATATCTGCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR GCA 72 bp ATGCAGAACCCAGGGTGGGCAGAGCAGAGCAGCACTTaGTGGGATAGGCCTCGAGCCTGGTTTCTGAGTCCT +
Preference number: 3 (lower is better)
Translates to: MQNPGWAEQSST*WDRPRAWFLSP
Trigger: AGGACTCAGAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTGGGTTCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR TCA 72 bp AACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATaGCCCTACCAAAGTCCCTCTCCCAGGGGTCATTGG +
Preference number: 3 (lower is better)
Translates to: NPEQDQTPATLS*PYQSPSPRGHW
Trigger: CCAATGACCCCTGGGAGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CAA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAACTCTCCCAGGGGTCATaGGCAGAGAAACCCCAACAG +
Preference number: 3 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKLSQGS*AEKPQQ
Trigger: CTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAG...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CAA 90 bp GTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCCACACCTTATCTCCTTGCCTaGGCTAAGGCACTGACAGGA +
Preference number: 3 (lower is better)
Translates to: VQPVVRAPRCNHLITISTPYLLA*AKALTG
Trigger: TCCTGTCAGTGCCTTAGCCAAGGCAAGGAGATAAGG...TGTGGATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CAA 90 bp ACATTACAAGTCATTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACGGGAGGTGTCGGCACTaGAGGAAAAGGCTCAGTTGG +
Preference number: 3 (lower is better)
Translates to: TLQVICENSLPPATGSLYGRCRH*RKRLSW
Trigger: CCAACTGAGCCTTTTCCTCAAGTGCCGACACCTCCC...GTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CAA 90 bp ACATTACAAGTCATTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAATTTGTGCAGCCAGTaGTCAGGGCTCCCAGGTGCA +
Preference number: 3 (lower is better)
Translates to: TLQVICENSLPPATGSLYNLCSQ*SGLPGA
Trigger: TGCACCTGGGAGCCCTGACAACTGGCTGCACAAATT...GTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR TCA 72 bp GCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTaGAGTTGGGCACATGTGGTCAGAGAAGCCCCAAGG +
Preference number: 3 (lower is better)
Translates to: APQKMRVPWFSY*SWAHVVREAPR
Trigger: CCTTGGGGCTTCTCTGACCACATGTGCCCAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CAA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATTGGAAGGAAAATGAGTaGCAGGAATCCAGGGAGCAC +
Preference number: 3 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYWKENE*QESREH
Trigger: GTGCTCCCTGGATTCCTGCAACTCATTTTCCTTCCA...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CAA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCGGGAAAAGCTGGTCTTaGGAGAGGTATGAATGTGCA +
Preference number: 3 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGGKSWS*ERYECA
Trigger: TGCACATTCATACCTCTCCAAAGACCAGCTTTTCCC...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CAA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCCCCTTGGTTCTCTTATaGAAGTTGGGCACATGTGGT +
Preference number: 3 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGPLVLL*KLGTCG
Trigger: ACCACATGTGCCCAACTTCAATAAGAGAACCAAGGG...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR GCA 72 bp TTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTaGAACCACCTTATAACCATATCCACAGTCACAGAG +
Preference number: 3 (lower is better)
Translates to: LEFVQPVVRAPR*NHLITISTVTE
Trigger: CTCTGTGACTGTGGATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CAA 90 bp ACCCCTTGCAAAGCCCTGAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTCTGACACCTTTACTTTaGGAATTTGTGCAGCCAGTT +
Preference number: 3 (lower is better)
Translates to: TPCKALNQSQAPQKMRVPLTPLL*EFVQPV
Trigger: AACTGGCTGCACAAATTCCAAAAGTAAAGGTGTCAG...AGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTCAGGGCTTTGCAAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR TCA 72 bp GAGGTGTCGGCACTTGAGGAAAAGGCTCAGTTGGCTTaGAATGTCCACTCCTACAGTGGAAAGTCCATCTAT +
Preference number: 3 (lower is better)
Translates to: EVSALEEKAQLA*NVHSYSGKSIY
Trigger: ATAGATGGACTTTCCACTGTAGGAGTGGACATTTCAAGCCAACTGAGCCTTTTCCTCAAGTGCCGACACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR TCA 72 bp TTCCACTATAAGAGAGATGAGGGAGGTGTCGGCACTTaGGGAAAAGGCTCAGTTGGCTTGAAATGTCCACTC +
Preference number: 3 (lower is better)
Translates to: FHYKRDEGGVGT*GKGSVGLKCPL
Trigger: GAGTGGACATTTCAAGCCAACTGAGCCTTTTCCTCAAGTGCCGACACCTCCCTCATCTCTCTTATAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CAA 90 bp ACATTACAAGTCATTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAAAGGCTCAGTTGGCTaGAAATGTCCACTCCTACAG +
Preference number: 3 (lower is better)
Translates to: TLQVICENSLPPATGSLYKGSVG*KCPLLQ
Trigger: CTGTAGGAGTGGACATTTCAAGCCAACTGAGCCTTT...GTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR-3UTR CAA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGACATGGGCCCCATACTaGTGCAAAGAAATGGGTAGA +
Preference number: 3 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLTWAPY*CKEMGR
Trigger: TCTACCCATTTCTTTGCACAAGTATGGGGCCCATGT...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR TCA 72 bp AAGAGCATCCTTATCTCCTTGCCTTGGCTAAGGCACTaGCAGGAAAAATGCAAGGTAGGAATGGCAAAGAGG +
Preference number: 3 (lower is better)
Translates to: KSILISLPWLRH*QEKCKVGMAKR
Trigger: CCTCTTTGCCATTCCTACCTTGCATTTTTCCTGTCAGTGCCTTAGCCAAGGCAAGGAGATAAGGATGCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCGGCAGCAGGGAAGGCTaGGGGCCCTGGCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFGSREG*GPWLGK
Trigger: TTTCCCCAGCCAGGGCCCTCAGCCTTCCCTGCTGCC...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCGCCCGGTTCAGTGTCTaGTGCTCCTGCCCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFARFSV*CSCPRR
Trigger: CCGCCTGGGGCAGGAGCAGCAGACACTGAACCGGGC...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGTCCCTCTCCCAGCGGTTCAGTGTCTGCTaGTCCTGCCCCAGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: AGPDPRHFIMTLPKSLSQRFSVC*SCPRRA
Trigger: GGCCCGCCTGGGGCAGGAGCAGCAGACACTGAACCG...CTGGGAGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGTCCCTCTCCCAGCCTCCAGCTCAGCCTTaGCTCGCCGGAGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: AGPDPRHFIMTLPKSLSQPPAQP*LAGAPP
Trigger: GGGAGGTGCTCCGGCGAGGCAAGGCTGAGCTGGAGG...CTGGGAGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTGAGTGTCTGCTGCTCCTaGCCCAGGCGGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QRNPNSSLNQSLGQQGRLSVCCS*PRRASP
Trigger: GGGGCTGGCCCGCCTGGGGCAGGAGCAGCAGACACT...CAGCCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTGCTGGCGCTGGGCATCTaGCACCTCCCGCCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: QRNPNSSLNQSLGQQGRLLALGI*HLPPGL
Trigger: AAGGCCCGGCGGGAGGTGGCAGATGCCCAGCGCCAG...CAGCCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCTTCTGGGACTCAAGCTaGGAGAGGCTGGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFFWDSS*ERLALG
Trigger: GCCTAGTGCCAGCCTCTCTCAGCTTGAGTCCCAGAA...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCTCCTGGGTTGCATCTTaGATGCTCCTGCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFSWVAS*MLLRSC
Trigger: GCAGCTCCGCAGGAGCATGCAAGATGCAACCCAGGA...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCATGCAGAACCCAGGGTaGGCAGAGCAGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFMQNPG*AEQSST
Trigger: AGTGCTGCTCTGCTCTGCCCACCCTGGGTTCTGCAT...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCATGGTGGGGTCCTGTaGACTCCTCCGCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WQRNPNSSLNQSLGQQGRHGGVL*TPPRLL
Trigger: GAGGAGCCGCGGAGGAGTGCACAGGACCCCACCATG...CCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ACCCCTTGCAAAGCCCTGAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTCAGCCTGGGATGCCTaGAGGGCCTGCCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TPCKALNQSQAPQKMRVPSAWDA*RACRSL
Trigger: GAGGCTGCGGCAGGCCCTGCAGGCATCCCAGGCTGA...AGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTCAGGGCTTTGCAAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTGGCCCAATCCTTGGCCTaGCGCTGGGCATCTGCCACC +
Preference number: 4 (lower is better)
Translates to: QRNPNSSLNQSLGQQGRLAQSLA*RWASAT
Trigger: GGTGGCAGATGCCCAGCGCCAGGCCAAGGATTGGGC...CAGCCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCCGAGCTAACAGGAGCTaGTCTGTAGGTTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFRANRS*SVGCSP
Trigger: CGGAGAGCAACCTACAGACCAGCTCCTGTTAGCTCG...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTGCCAGGGCCTGCCAGTaGGGCCTGGGAGTGGGAACG +
Preference number: 4 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLARACQ*GLGVGT
Trigger: CGTTCCCACTCCCAGGCCTCACTGGCAGGCCCTGGC...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCTCAGCCCTTCGTTTTTaGGAGCTGACTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFSALRF*ELTQQL
Trigger: CAGCTGCTGAGTCAGCTCTCAAAAACGAAGGGCTGA...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGTCCCTCTCCCAGTCTCGCTGGTACTGCTaGCGGACATGTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: AGPDPRHFIMTLPKSLSQSRWYC*RTCSTS
Trigger: GGAGGTGGAACATGTCCGGCAGCAGTACCAGCGAGA...CTGGGAGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCAAGCGTCGTCTCCACTaGGGCCCGCCGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIKRRLH*GPPLPQ
Trigger: CTGGGGCAGCGGCGGGCCGCAGTGGAGACGACGCTT...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGTCCCTCTCCCAGCGCTCCAGCCCAACTTaGGATGGCTCTAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AGPDPRHFIMTLPKSLSQRSSPT*DGSSFC
Trigger: GCAGAAGCTAGAGCCATCCCAAGTTGGGCTGGAGCG...CTGGGAGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TACCAAAGTCCCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCCTCCCCTCCTCTTCCTaGGACGCATTCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: YQSPSPRGHWQRNPNSSLLPSSS*DAFRAS
Trigger: GGAGGCCCTGAATGCGTCCCAGGAAGAGGAGGGGAG...GAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGGGACTTTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ACCCCTTGCAAAGCCCTGAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTACTGCCTGGTGGGGCTaGCTCCTGCTGGTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: TPCKALNQSQAPQKMRVPTAWWG*LLLVSK
Trigger: CTTCGAGACCAGCAGGAGGCAGCCCCACCAGGCAGT...AGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTCAGGGCTTTGCAAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCTGTTTCAGCTTGTTCTaGAGCTCCATCACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFCFSLF*SSITWV
Trigger: GACCCAGGTGATGGAGCTGCAGAACAAGCTGAAACA...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGTCCCTCTCCCAGCATCTTGCATGCTCCTaGGGAGCTGCTCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: AGPDPRHFIMTLPKSLSQHLACS*GAALCL
Trigger: GAGACACAGAGCAGCTCCGCAGGAGCATGCAAGATG...CTGGGAGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTCTTGCTCCAGCCCCTaGAGTCGCTGGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: PLPGVIGRETPTALSINHSCSSP*SRWASS
Trigger: GCTACTGGCCCAGCGACTGCAGGGGCTGGAGCAAGA...GTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGGTGCTAGAGGTCCAGTaGTTGGTGGACTGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: WQRNPNSSLNQSLGQQGRVLEVQ*LVDWRS
Trigger: GGAGCGCCAGTCCACCAACCACTGGACCTCTAGCAC...CCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCCACAATGGTCCACACTGCCTaGTGGGGCTGCCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VQPVVRAPRCNHLITISTMVHTA*WGCLLL
Trigger: CAGCAGGAGGCAGCCCCACCAGGCAGTGTGGACCAT...TGTGGATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TGTCGGCACTTGAGGAAAAGGCTCAGTTGGCTTGAAATGTCCACTCCTACAGTGGTGTCCCGCTCAGCCTaGGATGCCTGCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CRHLRKRLSWLEMSTPTVVSRSA*DACRAC
Trigger: GCAGGCCCTGCAGGCATCCCAGGCTGAGCGGGACAC...CACTGTAGGAGTGGACATTTCAAGCCAACTGAGCCTTTTCCTCAAGTGCCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATATCCTCCACCTCACGCTaGGCCTTCTTCCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQISSTSR*AFFLRP
Trigger: CGGCCTGAGGAAGAAGGCCCAGCGTGAGGTGGAGGA...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp TACCAAAGTCCCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCCTTTCTCCCCACTGTTaGGCACCACAAAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: YQSPSPRGHWQRNPNSSLLSPHC*APQRAA
Trigger: GGCAGCCCTTTGTGGTGCTCAACAGTGGGGAGAAAG...GAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGGGACTTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCAAGGCTCAGTTGGCTTaGAATGTCCACTCCTACAGT +
Preference number: 4 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFKAQLA*NVHSYS
Trigger: ACTGTAGGAGTGGACATTTCAAGCCAACTGAGCCTT...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGGGCTGTCCAGGCTCTTaGTCCGTTTGCGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: WQRNPNSSLNQSLGQQGRGCPGS*SVCAVQ
Trigger: CTGAACAGCGCAAACGGAGCAAGAGCCTGGACAGCC...CCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ACCCCTTGCAAAGCCCTGAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGCTCTGGGCTGGCTaGTTCGAAGTGCCCACATGG +
Preference number: 4 (lower is better)
Translates to: TPCKALNQSQAPQKMRVPWLWAG*FEVPTW
Trigger: CCATGTGGGCACTTCGAAGCAGCCAGCCCAGAGCCA...AGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTCAGGGCTTTGCAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTGTCCCGCAGCCTCAGCTaGTCCTCTACTCGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QRNPNSSLNQSLGQQGRLSRSLS*SSTRCF
Trigger: GAAACAGCGAGTAGAGGAGCAGCTGAGGCTGCGGGA...CAGCCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCGCCACCTCCTGGCTCTaGCGTTCTGCCTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGATSWL*RSACSS
Trigger: GGAACTGCAGGCAGAACGGCAGAGCCAGGAGGTGGC...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCCTCAGGACCGCCAGCTaGTTCTCCAACTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGLRTAS*FSNSRS
Trigger: GGACCGGGAGTTGGAGAAGCAGCTGGCGGTCCTGAG...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCCTGCCCCAGCACTGTTaGCTCTGCCTCGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGLPQHC*LCLGHH
Trigger: ATGGTGGCCGAGGCAGAGGCAACAGTGCTGGGGCAG...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTTGCCTTGGCTAAGGCACTGACAGGAAAAATGCAAGGTAGGAATGGCAAAGAGACTGCGGCCCGCCGCTaGCCCAGCACTGTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LALAKALTGKMQGRNGKETAARR*PSTVAS
Trigger: AGAGGCAACAGTGCTGGGGCAGCGGCGGGCCGCAGT...CTCTTTGCCATTCCTACCTTGCATTTTTCCTGTCAGTGCCTTAGCCAAGGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TGTCGGCACTTGAGGAAAAGGCTCAGTTGGCTTGAAATGTCCACTCCTACAGTGTCGAGACCCTTCAGCTaGCGGGCCCTGTCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CRHLRKRLSWLEMSTPTVSRPFS*RALSSW
Trigger: CCAGGACGACAGGGCCCGGCAGCTGAAGGGTCTCGA...CACTGTAGGAGTGGACATTTCAAGCCAACTGAGCCTTTTCCTCAAGTGCCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTGGGGGAGCAGTGTCAATaGTGCTACCTGGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QRNPNSSLNQSLGQQGRLGEQCQ*CYLGKP
Trigger: TGGCTTCCCCAGGTAGCACCATTGACACTGCTCCCC...CAGCCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACAGGTCCAGTGGTTGGTaGACTGGCGCTCCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: PLPGVIGRETPTALSINHRSSGW*TGAPVP
Trigger: AGGAACGGGAGCGCCAGTCCACCAACCACTGGACCT...GTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GGTATGGGGACTACCACATGGGCCCCATACTTGTGCAAAGAAATGGGTAGAGCCGTTCTGGCTCTGGGCTaGCTGCTTCGAAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GMGTTTWAPYLCKEMGRAVLALG*LLRSAH
Trigger: GTGGGCACTTCGAAGCAGCCAGCCCAGAGCCAGAAC...GGCTCTACCCATTTCTTTGCACAAGTATGGGGCCCATGTGGTAGTCCCCATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATACAGAGCAGCACTTGCTaGGATAGGCCTCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQIQSSTC*DRPRAW
Trigger: CCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTG...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTGGGGCAGGAAATCCCTTaGCCTGAGAGTAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QRNPNSSLNQSLGQQGRLGQEIP*PESRGS
Trigger: AGAACCCCTACTCTCAGGTCAAGGGATTTCCTGCCC...CAGCCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATATCAGATGTGCTGCTCTaGGAGGGGGCAGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQISDVLL*EGAGNP
Trigger: GGGATTTCCTGCCCCCTCGCAGAGCAGCACATCTGA...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATAGGCTCTTGCTCCGTTTaGGCTGTTCAGGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQIGSCSV*AVQGVA
Trigger: TGCTACCCCCTGAACAGCGCAAACGGAGCAAGAGCC...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATATCATATGGTCCACACTaGCTGGTGGGGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQISYGPH*LVGLPP
Trigger: AGGAGGCAGCCCCACCAGGCAGTGTGGACCATATGA...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCCACAAAGCTCACCCTGCCCTaGCACGGCCTTAGTAGAACC +
Preference number: 4 (lower is better)
Translates to: VQPVVRAPRCNHLITISTKLTLP*HGLSRT
Trigger: GGTTCTACTAAGGCCGTGGCAGGGCAGGGTGAGCTT...TGTGGATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCCGGGTAAGCTCACCCTaGCCTGCCACGGCCTTAGTA +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGRVSSP*PATALV
Trigger: TACTAAGGCCGTGGCAGGGCAGGGTGAGCTTACCCG...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ACCCCTTGCAAAGCCCTGAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTAGGGCTGACATCTTCTaGCTCTCGGCCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: TPCKALNQSQAPQKMRVPRADIF*LSASST
Trigger: AGTGCTGGAGGCCGAGAGGCAGAAGATGTCAGCCCT...AGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTCAGGGCTTTGCAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACCAGCACTGTTGCCTCTaGCTCGGCCACCATCTTAGC +
Preference number: 4 (lower is better)
Translates to: PLPGVIGRETPTALSINHQHCCL*LGHHLS
Trigger: GCTAAGATGGTGGCCGAGGCAGAGGCAACAGTGCTG...GTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGACGCTTCTTGTTCTCTaGCTCTTGCTCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: WQRNPNSSLNQSLGQQGRTLLVL*LLLQPL
Trigger: CAGGGGCTGGAGCAAGAGGCAGAGAACAAGAAGCGT...CCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCGAGCAGAGCAGCACTTaGTGGGATAGGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGEQSST*WDRPRA
Trigger: GGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTC...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCGCTCCCTATACAACCTaGTTAGGAAATATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFAPYTT*LGNMEV
Trigger: CACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGC...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGTCCCTCTCCCAGCTCTGCACCACTCACTaGCTCTGTGATGAAGCGAAT +
Preference number: 4 (lower is better)
Translates to: AGPDPRHFIMTLPKSLSQLCTTH*LCDEAN
Trigger: ATTCGCTTCATCACAGAGCCAGTGAGTGGTGCAGAG...CTGGGAGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCCACACAGTGGTTGGTGGACTaGCGCTCCCGTTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VQPVVRAPRCNHLITISTQWLVD*RSRSSK
Trigger: CTTTGAGGAACGGGAGCGCCAGTCCACCAACCACTG...TGTGGATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGGGCTGCCTCCTGCTaGTCTCGAAGGAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYGAASC*SRRRSG
Trigger: TCCAGACCTCCTTCGAGACCAGCAGGAGGCAGCCCC...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGATGGTGGCCTTCATATaGTCCACACTGCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: WQRNPNSSLNQSLGQQGRMVAFI*STLPGG
Trigger: CCCACCAGGCAGTGTGGACCATATGAAGGCCACCAT...CCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp ACCCCTTGCAAAGCCCTGAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTCGGGCCCTGTCGTCCTaGGAACGCTTCTTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: TPCKALNQSQAPQKMRVPRALSS*ERFLFS
Trigger: AGAGAACAAGAAGCGTTCCCAGGACGACAGGGCCCG...AGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTCAGGGCTTTGCAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGGAACTGGAGGGGTATaGGGACTACCACATGGGCCC +
Preference number: 4 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKGTGGV*GLPHGP
Trigger: GGGCCCATGTGGTAGTCCCCATACCCCTCCAGTTCC...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR CAA 72 bp CCCCAAGGAAGGCCACAGGGACTGACACCTTTACTTTaGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PQGRPQGLTPLL*EFVQPVVRAPR
Trigger: CCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAAAGGTGTCAGTCCCTGTGGCCTTCCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp AACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGCCCTCGCACAAGGGCTaGCATCTTCTGCCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: NLLRKYGGESSPLPLPYQPSHKG*HLLPLG
Trigger: GCCGAGAGGCAGAAGATGTCAGCCCTTGTGCGAGGG...CTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAATGCCCTGTCTCCTCTaGAGTCTCCTCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKMPCLL*SLLQLP
Trigger: AGGGAGCTGGAGGAGACTTCAGAGGAGACAGGGCAT...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp AACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGAGCTCTGTCCTCAGCTaGTCCACCTGGTCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: NLLRKYGGESSPLPLPYQSSVLS*STWSRP
Trigger: TGGCCGGGACCAGGTGGATCAGCTGAGGACAGAGCT...CTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCCCTTCTCCAGAGACTTaGTCCGGGCCTGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGPSPET*SGPGAV
Trigger: AACAGCTCCAGGCCCGGATCAAGTCTCTGGAGAAGG...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp AACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGTGCCCAGCGATTCCCTaGACACGCACAGCAACCCCG +
Preference number: 4 (lower is better)
Translates to: NLLRKYGGESSPLPLPYQCPAIP*TRTATP
Trigger: CGGGGTTGCTGTGCGTGTGCAGGGAATCGCTGGGCA...CTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCAGCACCACAAAGGGCTaGCCAGCGATTCCCTGCACA +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGSTTKG*PAIPCT
Trigger: TGTGCAGGGAATCGCTGGGCAGCCCTTTGTGGTGCT...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAGGTGAATGCTCCTCATCAGATGTaGTGCTCTGCGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: FLLPPAPYTTCLGNMEVNAPHQM*CSARGQ
Trigger: CTGCCCCCTCGCAGAGCAGCACATCTGATGAGGAGC...ATTCACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ACATTACAAGTCATTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACGGTGGGGCTGCCTCCTaGTGGTCTCGAAGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TLQVICENSLPPATGSLYGGAAS*WSRRRS
Trigger: AGACCTCCTTCGAGACCAGCAGGAGGCAGCCCCACC...GTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATAGCTCCTTGTTGCTCTaGTGGGCCTCCCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYSSLLL*WASPFL
Trigger: GAGGAAGGGGGAGGCCCAGCAGAGCAACAAGGAGCT...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGGGTTGCATCTTGCATaGTCCTGCGGAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKGLHLA*SCGAAL
Trigger: CAGAGCAGCTCCGCAGGAGCATGCAAGATGCAACCC...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAGGTGAATCTCGGCCTCCAGCACTaGATGGTCCTGGGTTGCATC +
Preference number: 4 (lower is better)
Translates to: FLLPPAPYTTCLGNMEVNLGLQH*MVLGCI
Trigger: GATGCAACCCAGGACCATGCAGTGCTGGAGGCCGAG...ATTCACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATACGAGCAGACCTTTCCTaGATGAGCTCTGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQIRADLS*MSSVLS
Trigger: GCTGAGGACAGAGCTCATGCAGGAAAGGTCTGCTCG...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCCACATTGGCCCCCTTGATTTaGACCCCAAAGGAGTCACCG +
Preference number: 4 (lower is better)
Translates to: VQPVVRAPRCNHLITISTLAPLI*TPKESP
Trigger: CGGTGACTCCTTTGGGGTCCAAATCAAGGGGGCCAA...TGTGGATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAACATGTTCCACCTCCTaGTCACGGGAGGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKTCSTS*SREATS
Trigger: GGAGGTAGCCTCCCGTGACCAGGAGGTGGAACATGT...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CTCAGTTGGCTTGAAATGTCCACTCCTACAGTGGAAAGTCCATCTATCAGCTTACGCCCAGCCACCTCCTaGCTCTGCCGTTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LSWLEMSTPTVESPSISLRPATS*LCRSAC
Trigger: GCAGGCAGAACGGCAGAGCCAGGAGGTGGCTGGGCG...TAAGCTGATAGATGGACTTTCCACTGTAGGAGTGGACATTTCAAGCCAACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GACACCTTTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAAGCTGAGGGCCCTGGCTaGGGAAAAGCTGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: DTFTFGICAASCQGSQVQAEGPG*GKAGLW
Trigger: CCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTCAGC...TTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAAAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCAAACCAAGGCTGGATTaGATTGGGAAAGAACGTTTG +
Preference number: 4 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFKPRLD*IGKERL
Trigger: CAAACGTTCTTTCCCAATCCAATCCAGCCTTGGTTT...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTGAGAGGTTTCACTTTCTaGGCTTCCCTCCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: QRNPNSSLNQSLGQQGRLRGFTF*ASLPQD
Trigger: ATCCTGAGGGAGGGAAGCTCAGAAAGTGAAACCTCT...CAGCCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCCTCTGGATCTCATCCTaGAGTCGGCTCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGLWISS*SRLSPP
Trigger: TGGAGGACTGAGCCGACTTCAGGATGAGATCCAGAG...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp ACCCCTTGCAAAGCCCTGAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTCTGCTTCATCCACCTaGCGCTTCAAAGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: TPCKALNQSQAPQKMRVPSASST*RFKAFT
Trigger: GGTGAAGGCTTTGAAGCGTCAGGTGGATGAAGCAGA...AGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTCAGGGCTTTGCAAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACGAGCAGTGTCAATGGTaGTACCTGGGGAAGCCACTT +
Preference number: 4 (lower is better)
Translates to: PLPGVIGRETPTALSINHEQCQW*YLGKPL
Trigger: AAGTGGCTTCCCCAGGTAGCACCATTGACACTGCTC...GTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTTCCCTCCCTCAGGATaGCATAGATGGTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PLPGVIGRETPTALSINHFPPSG*HRWWPS
Trigger: TGAAGGCCACCATCTATGGCATCCTGAGGGAGGGAA...GTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTGTGTCTCGCTGGTACTaGTGCCGGACATGTTCCACC +
Preference number: 4 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLVSRWY*CRTCST
Trigger: GGTGGAACATGTCCGGCAGCAGTACCAGCGAGACAC...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATATTCTCCATTCGCAGCTaGAGGAGTTCCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQIFSIRS*RSSCLV
Trigger: CACCAAGCAGGAACTCCTGCAGCTGCGAATGGAGAA...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAGGTGAATGCTCCAAACCCAGGATaGGCCGGCGGAATTCGTCAT +
Preference number: 4 (lower is better)
Translates to: FLLPPAPYTTCLGNMEVNAPNPG*AGGIRH
Trigger: ATGACGAATTCCGCCGGCGCATCCTGGGTTTGGAGC...ATTCACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATAGCTGCTGCAGGGCTTaGTTAGAGTCCTCCCCGATC +
Preference number: 4 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYSCCRA*LESSPI
Trigger: GATCGGGGAGGACTCTAAGCAAGCCCTGCAGCAGCT...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCTCTTGCATCCTTAGCTaGGCGTCGTCCACCTCGACG +
Preference number: 4 (lower is better)
Translates to: ICAASCQGSQVQPPYNHISCILS*ASSTST
Trigger: CGTCGAGGTGGACGACGCCCAGCTAAGGATGCAAGA...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCGTCAATGGTGCTACCTaGGGAAGCCACTTTCGGGGC +
Preference number: 4 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIVNGAT*GSHFRG
Trigger: GCCCCGAAAGTGGCTTCCCCAGGTAGCACCATTGAC...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GACACCTTTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACTCAGGTTCTGGCTCTaGGCTGGCTGCTTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: DTFTFGICAASCQGSQVQLRFWL*AGCFEV
Trigger: CACTTCGAAGCAGCCAGCCCAGAGCCAGAACCTGAG...TTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAAAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATAAGGCGCTTCATGTTCTaGAGCTCCTTGTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQIRRFMF*SSLLLC
Trigger: GCAGAGCAACAAGGAGCTCCAGAACATGAAGCGCCT...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAGGTGAATGCCTCCAGCACTGCATaGTCCTGGGTTGCATCTTGC +
Preference number: 4 (lower is better)
Translates to: FLLPPAPYTTCLGNMEVNASSTA*SWVASC
Trigger: GCAAGATGCAACCCAGGACCATGCAGTGCTGGAGGC...ATTCACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGCACTGGCCCAATCCTTaGCCTGGCGCTGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLHWPNP*PGAGHL
Trigger: CAGATGCCCAGCGCCAGGCCAAGGATTGGGCCAGTG...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTTCTTCTCAGCCTCACTaGCCCAATCCTTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLSSQPH*PNPWPG
Trigger: GCCAGGCCAAGGATTGGGCCAGTGAGGCTGAGAAGA...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAAGCCTTCTGAGCTaGCCAACCGGGTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYGSLLS*PTGSSG
Trigger: ACCTGAAGACCCGGTTGGCCAGCTCAGAAGGCTTCC...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp GACACCTTTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAAGGTCATTGGCCCCCTTaGTTTGGACCCCAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: DTFTFGICAASCQGSQVQGHWPP*FGPQRS
Trigger: ACTCCTTTGGGGTCCAAATCAAGGGGGCCAATGACC...TTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAAAGGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCCAGACCTTTCCTGCATaGGCTCTGTCCTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGQTFPA*ALSSAD
Trigger: ATCAGCTGAGGACAGAGCTCATGCAGGAAAGGTCTG...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp TTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAGGTGAATCCTGGAGCTGTTCATTaGCCTCATGCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FLLPPAPYTTCLGNMEVNPGAVH*PHAAPP
Trigger: TGGAGGAGCAGCATGAGGTCAATGAACAGCTCCAGG...ATTCACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp TACCAAAGTCCCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCGTCGAATTCCTCATCTaGGCTCAGCCCTTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: YQSPSPRGHWQRNPNSSLVEFLI*AQPFVF
Trigger: AAAAACGAAGGGCTGAGCTCAGATGAGGAATTCGAC...GAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGGGACTTTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp AACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGCTCGAGCCTGGTTTCTaGGTCCTTGAGGACCACGAG +
Preference number: 4 (lower is better)
Translates to: NLLRKYGGESSPLPLPYQLEPGF*VLEDHE
Trigger: CTCGTGGTCCTCAAGGACTCAGAAACCAGGCTCGAG...CTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCGTAGGTACTGGCTCTTaGATCCTTAGCTGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIVGTGS*ILSWAS
Trigger: CGACGCCCAGCTAAGGATGCAAGAGCCAGTACCTAC...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTTGCCTTGGCTAAGGCACTGACAGGAAAAATGCAAGGTAGGAATGGCAAAGAGCCTCATCAGATGTGCTaGTCTGCGAGGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LALAKALTGKMQGRNGKEPHQMC*SARGQE
Trigger: TTCCTGCCCCCTCGCAGAGCAGCACATCTGATGAGG...CTCTTTGCCATTCCTACCTTGCATTTTTCCTGTCAGTGCCTTAGCCAAGGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ACATTACAAGTCATTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACGTTTTCTCCTCCAGCTaGCGCTCCAGCCCAACTTGG +
Preference number: 4 (lower is better)
Translates to: TLQVICENSLPPATGSLYVFSSS*RSSPTW
Trigger: CCAAGTTGGGCTGGAGCGGCAGCTGGAGGAGAAAAC...GTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TACAACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACTCTGGAGCTCCTTGTTaGTCTGCTGGGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: YNLLRKYGGESSPLPLPYSGAPC*SAGPPP
Trigger: AGGGGGAGGCCCAGCAGAGCAACAAGGAGCTCCAGA...GTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ACATTACAAGTCATTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACATGCTCCTGCGGAGCTaGTCTGTGTCTCGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: TLQVICENSLPPATGSLYMLLRS*SVSRWY
Trigger: GTACCAGCGAGACACAGAGCAGCTCCGCAGGAGCAT...GTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCTGCATGGTCCTGGGTTaGATCTTGCATGCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: ICAASCQGSQVQPPYNHICMVLG*ILHAPA
Trigger: CGCAGGAGCATGCAAGATGCAACCCAGGACCATGCA...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGTCTGCCTCCAGCCGCTaGAGCTTGTCCCGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLSASSR*SLSRSR
Trigger: ACGACTACGGGACAAGCTGCAGCGGCTGGAGGCAGA...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATATGGTCATTGACATGCTaGCGCTCGTCTTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQIWSLTC*RSSSIW
Trigger: CCAGATTGAAGACGAGCGGCAGCATGTCAATGACCA...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTGTTCTGGTCATTGACATaGTGCCGCTCGTCTTCAATC +
Preference number: 4 (lower is better)
Translates to: QRNPNSSLNQSLGQQGRLFWSLT*CRSSSI
Trigger: GATTGAAGACGAGCGGCAGCATGTCAATGACCAGAA...CAGCCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACGTCAGGGCTCCCAGGTaGAACCACCTTATAACCATA +
Preference number: 4 (lower is better)
Translates to: PLPGVIGRETPTALSINHVRAPR*NHLITI
Trigger: TATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGAC...GTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGTGATGAAGCGAATCTaGACTCCATGGTCTACGGGG +
Preference number: 4 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKVMKRI*TPWSTG
Trigger: CCCCGTAGACCATGGAGTCCAGATTCGCTTCATCAC...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp ACCCCTTGCAAAGCCCTGAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTGGATGCCATAGATGGTaGCCTTCATATGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: TPCKALNQSQAPQKMRVPGCHRW*PSYGPH
Trigger: GTGTGGACCATATGAAGGCCACCATCTATGGCATCC...AGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTCAGGGCTTTGCAAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GGTATGGGGACTACCACATGGGCCCCATACTTGTGCAAAGAAATGGGTAGAGCCCGTAAATCTTCACCCTaGTCCAAGAGGCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: GMGTTTWAPYLCKEMGRARKSSP*SKRRFM
Trigger: CATGAAGCGCCTCTTGGACCAGGGTGAAGATTTACG...GGCTCTACCCATTTCTTTGCACAAGTATGGGGCCCATGTGGTAGTCCCCATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TGTCGGCACTTGAGGAAAAGGCTCAGTTGGCTTGAAATGTCCACTCCTACAGTGTGCTCTGTGTCTCGCTaGTACTGCTGCCGGACATGT +
Preference number: 4 (lower is better)
Translates to: CRHLRKRLSWLEMSTPTVCSVSR*YCCRTC
Trigger: ACATGTCCGGCAGCAGTACCAGCGAGACACAGAGCA...CACTGTAGGAGTGGACATTTCAAGCCAACTGAGCCTTTTCCTCAAGTGCCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCAGCACTGCATGGTCCTaGGTTGCATCTTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGSTAWS*VASCML
Trigger: GAGCATGCAAGATGCAACCCAGGACCATGCAGTGCT...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTTGAGCACCTCAACCTaGCGAGTATCTCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: PLPGVIGRETPTALSINHLSTST*RVSPAL
Trigger: TAGTGCTGGAGATACTCGCCAGGTTGAGGTGCTCAA...GTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTTCGTCATTTTCCTCCTaGGTCTCCCGAAGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLSSFSS*VSRSVV
Trigger: GACGACGCTTCGGGAGACCCAGGAGGAAAATGACGA...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGAGCCCCTGCAGTCGCTaGGCCAGTAGCTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLSPCSR*ASSSLS
Trigger: GGACAAAGAGCTACTGGCCCAGCGACTGCAGGGGCT...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp TTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAGGTGAATCTCTGTTTCCAGCCGTaGGACTTTTTCCTCGAGACC +
Preference number: 4 (lower is better)
Translates to: FLLPPAPYTTCLGNMEVNLCFQP*DFFLET
Trigger: GGTCTCGAGGAAAAAGTCTCACGGCTGGAAACAGAG...ATTCACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTTGGTTTCTGAGTCCTTaGGGACCACGAGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLWFLSP*GPRANR
Trigger: CCTGTTAGCTCGTGGTCCTCAAGGACTCAGAAACCA...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCCATAGGGTATTTCCCTaGGCCTTAGGGTTAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGHRVFP*ALGLRA
Trigger: AGCCCTTAACCCTAAGGCTCAGGGAAATACCCTATG...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp AACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGCACCTCGACGTAGAGTaGCCATCTCTGCACCACTCA +
Preference number: 4 (lower is better)
Translates to: NLLRKYGGESSPLPLPYQHLDVE*PSLHHS
Trigger: TGAGTGGTGCAGAGATGGGCACTCTACGTCGAGGTG...CTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCCAGTCCTGTCGCAGTTaGTGGAGGGTCTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIQSCRS*WRVFCS
Trigger: GCTACAAAAGACCCTCCAGCAACTGCGACAGGACTG...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGCAGCTGCTGTTTCTCTaGCTCCAGCCGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLQLLFL*LQPLQL
Trigger: AAGCTGCAGCGGCTGGAGGCAGAGAAACAGCAGCTG...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTCAGTTGGCTTGAAATGTCCACTCCTACAGTGGAAAGTCCATCTATCAGCTTATGGGCCTGGAGCTGCTaGAGGGCTTGCTTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LSWLEMSTPTVESPSISLWAWSC*RACLES
Trigger: GGACTCTAAGCAAGCCCTGCAGCAGCTCCAGGCCCA...TAAGCTGATAGATGGACTTTCCACTGTAGGAGTGGACATTTCAAGCCAACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAGGTGAATTGTTCATTGACCTCATaGTGCTCCTCCACCTCACGC +
Preference number: 4 (lower is better)
Translates to: FLLPPAPYTTCLGNMEVNCSLTS*CSSTSR
Trigger: GCGTGAGGTGGAGGAGCAGCATGAGGTCAATGAACA...ATTCACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAACAGCTTCTAACCCCTTaGAAAGCCCTGAATCAGAGC +
Preference number: 4 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKQLLTP*KALNQS
Trigger: GCTCTGATTCAGGGCTTTGCAAGGGGTTAGAAGCTG...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CTTGCCTTGGCTAAGGCACTGACAGGAAAAATGCAAGGTAGGAATGGCAAAGAGAGTGAGGCCTGGGAGTaGGAACGGAGTAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LALAKALTGKMQGRNGKESEAWE*ERSSFP
Trigger: TGGAAAGCTACTCCGTTCCCACTCCCAGGCCTCACT...CTCTTTGCCATTCCTACCTTGCATTTTTCCTGTCAGTGCCTTAGCCAAGGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TGCAGATATAAAAAGCAAGAAGAGCATCCTTATCTCCTTGCCTTGGCTAAGGCACTCAAAGGTGTCCCGTaGGAGGCGGCTGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CRYKKQEEHPYLLALAKALKGVP*EAAVQA
Trigger: AGCCTGGACAGCCGCCTCCCACGGGACACCTTTGAG...TGCCTTAGCCAAGGCAAGGAGATAAGGATGCTCTTCTTGCTTTTTATATCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TACAACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACAGAGGACTCAGGTTCTaGCTCTGGGCTGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YNLLRKYGGESSPLPLPYRGLRF*LWAGCF
Trigger: GAAGCAGCCAGCCCAGAGCCAGAACCTGAGTCCTCT...GTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTCAGGATGCCATAGATaGTGGCCTTCATATGGTCCA +
Preference number: 4 (lower is better)
Translates to: PLPGVIGRETPTALSINHSGCHR*WPSYGP
Trigger: TGGACCATATGAAGGCCACCATCTATGGCATCCTGA...GTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTTCCTGTCGCAGTTGCTaGAGGGTCTTTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLSCRSC*RVFCSW
Trigger: CCAGCTACAAAAGACCCTCCAGCAACTGCGACAGGA...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTGACTTGATCCGGGCCTaGAGCTGTTCATTGACCTCA +
Preference number: 4 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLDLIRA*SCSLTS
Trigger: TGAGGTCAATGAACAGCTCCAGGCCCGGATCAAGTC...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAATGGGGACTACCACATaGGCCCCATACTTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKMGTTT*APYLCK
Trigger: TTTGCACAAGTATGGGGCCCATGTGGTAGTCCCCAT...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGAAGTTGGGCACATGTaGTCAGAGAAGCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYEVGHM*SEKPQG
Trigger: TCCTTGGGGCTTCTCTGACCACATGTGCCCAACTTC...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR CAA 72 bp ATCATGACCCTACCAAAGTCCCTCTCCCAGGGGTCATaGGCAGAGAAACCCCAACAGCTCTCTCAATCAATC +
Preference number: 4 (lower is better)
Translates to: IMTLPKSLSQGS*AEKPQQLSQSI
Trigger: GATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGGGACTTTGGTAGGGTCATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCAAGGAGGTCTGGAGTTaGTTTGAACTGCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGKEVWS*FELQHG
Trigger: ACCATGCTGCAGTTCAAATCAACTCCAGACCTCCTT...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp ACATTACAAGTCATTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACGGTCTTTCTGGTCATTaGCATGCTGCCGCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: TLQVICENSLPPATGSLYGLSGH*HAAARL
Trigger: AAGACGAGCGGCAGCATGTCAATGACCAGAAAGACC...GTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp TACAACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACGCTCTCCGTAAGCAGTaGTGCAATGGACGAGGGATC +
Preference number: 4 (lower is better)
Translates to: YNLLRKYGGESSPLPLPYALRKQ*CNGRGI
Trigger: GATCCCTCGTCCATTGCATCACTGCTTACGGAGAGC...GTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAAGAGTGGAAGGAAAATaGGTTGCAGGAATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKRVEGK*VAGIQG
Trigger: TCCCTGGATTCCTGCAACTCATTTTCCTTCCACTCT...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCAAGCACCTCAGAAAATaGGGGTCCCTTGGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGKHLRK*GSLGSL
Trigger: AAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTT...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTTGCCTTGGCTAAGGCACTGACAGGAAAAATGCAAGGTAGGAATGGCAAAGAGAGCTGCAGGAGTTCCTaGTTGGTGGCTCTAAGATCC +
Preference number: 4 (lower is better)
Translates to: LALAKALTGKMQGRNGKESCRSS*LVALRS
Trigger: GGATCTTAGAGCCACCAAGCAGGAACTCCTGCAGCT...CTCTTTGCCATTCCTACCTTGCATTTTTCCTGTCAGTGCCTTAGCCAAGGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGGCACTAGCTCGGGCCTaGTCTAATTCCCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLALARA*SNSLCK
Trigger: CTTGCAGAGGGAATTAGAGCAGGCCCGAGCTAGTGC...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGGGCACATGTGGTCAGAGACTCTGCCGTTCTGCCTaGAGTTCCTTAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ENEGPLVLLLKLGTCGQRLCRSA*SSLSSS
Trigger: GGAGGAGCTTAAGGAACTGCAGGCAGAACGGCAGAG...TCTCTGACCACATGTGCCCAACTTCAATAAGAGAACCAAGGGACCCTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TACAACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCGAGTCTCCTTCAGCTaGTGCTCCAAACCCAGGATG +
Preference number: 4 (lower is better)
Translates to: YNLLRKYGGESSPLPLPYRVSFS*CSKPRM
Trigger: CATCCTGGGTTTGGAGCAGCAGCTGAAGGAGACTCG...GTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATATACTTTTGGAATTTGTaGAGCCAGTTGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQIYFWNL*SQLSGL
Trigger: GAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTA...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTTGCCTTGGCTAAGGCACTGACAGGAAAAATGCAAGGTAGGAATGGCAAAGAGAAACAGCCTTCCTCCTaGCACCGGCTCCCTATACAA +
Preference number: 4 (lower is better)
Translates to: LALAKALTGKMQGRNGKEKQPSS*HRLPIQ
Trigger: TTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTT...CTCTTTGCCATTCCTACCTTGCATTTTTCCTGTCAGTGCCTTAGCCAAGGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CTTGCCTTGGCTAAGGCACTGACAGGAAAAATGCAAGGTAGGAATGGCAAAGAGGCAGGCTCAGGACCCTaGACATGTTTCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LALAKALTGKMQGRNGKEAGSGP*TCFSLF
Trigger: GAACAAGCTGAAACATGTCCAGGGTCCTGAGCCTGC...CTCTTTGCCATTCCTACCTTGCATTTTTCCTGTCAGTGCCTTAGCCAAGGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAGGTGAATCTTAGCTGGTCTTTCTaGTCATTGACATGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: FLLPPAPYTTCLGNMEVNLSWSF*SLTCCR
Trigger: GCGGCAGCATGTCAATGACCAGAAAGACCAGCTAAG...ATTCACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAACCCTCAGGCTTAGCTaGTCTTTCTGGTCATTGACA +
Preference number: 4 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKTLRLS*SFWSLT
Trigger: TGTCAATGACCAGAAAGACCAGCTAAGCCTGAGGGT...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR CAA 72 bp AGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATaGAAGTTGGGCACATGTGGTCAGAGAAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: STSENEGPLVLL*KLGTCGQRSPK
Trigger: CTTGGGGCTTCTCTGACCACATGTGCCCAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTCCTTGGCTAAGGCACTaGCAGGAAAAATGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLPWLRH*QEKCKV
Trigger: TACCTTGCATTTTTCCTGTCAGTGCCTTAGCCAAGG...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp TGCAGATATAAAAAGCAAGAAGAGCATCCTTATCTCCTTGCCTTGGCTAAGGCACCCCTTGCAAAGCCCTaGATCAGAGCCAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: CRYKKQEEHPYLLALAKAPLAKP*IRAKHL
Trigger: GAGGTGCTTGGCTCTGATTCAGGGCTTTGCAAGGGG...TGCCTTAGCCAAGGCAAGGAGATAAGGATGCTCTTCTTGCTTTTTATATCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TGCAGATATAAAAAGCAAGAAGAGCATCCTTATCTCCTTGCCTTGGCTAAGGCACTGAGCGGGAAGCTTTaGGCCAGGAGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CRYKKQEEHPYLLALAKALSGKL*ARSPSP
Trigger: TGGAGAAGGACTCCTGGCGCAAAGCTTCCCGCTCAG...TGCCTTAGCCAAGGCAAGGAGATAAGGATGCTCTTCTTGCTTTTTATATCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp AACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGTGGGCCCCATACTTGTaGAAAGAAATGGGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: NLLRKYGGESSPLPLPYQWAPYL*KEMGRA
Trigger: GGCTCTACCCATTTCTTTGCACAAGTATGGGGCCCA...CTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TGCAGATATAAAAAGCAAGAAGAGCATCCTTATCTCCTTGCCTTGGCTAAGGCAGCTCCTGAGGCCCCTTaGTCATTGGCCCCCTTGATT +
Preference number: 4 (lower is better)
Translates to: CRYKKQEEHPYLLALAKAAPEAP*SLAPLI
Trigger: AATCAAGGGGGCCAATGACCAAGGGGCCTCAGGAGC...TGCCTTAGCCAAGGCAAGGAGATAAGGATGCTCTTCTTGCTTTTTATATCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp CAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTGTTCGAAGTGCCCACATaGTTGTCATATTTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: QRNPNSSLNQSLGQQGRLFEVPT*LSYFVL
Trigger: TAGCACAAAATATGACAACCATGTGGGCACTTCGAA...CAGCCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp AACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGCACCCTGCTCCAGAGTaGAAGGAAAATGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NLLRKYGGESSPLPLPYQHPAPE*KENELQ
Trigger: CTGCAACTCATTTTCCTTCCACTCTGGAGCAGGGTG...CTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCTTCCCTACCAGGGCTTaGTTCTCCCCAAAATCCAAA +
Preference number: 4 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIFPTRA*FSPKSK
Trigger: TTTGGATTTTGGGGAGAACCAAGCCCTGGTAGGGAA...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
3UTR CAA 72 bp GAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTaGGTTCTCTTATTGAAGTTGGGCACATGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ESEPSTSENEGP*VLLLKLGTCGQ
Trigger: CTGACCACATGTGCCCAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp CTCAGTTGGCTTGAAATGTCCACTCCTACAGTGGAAAGTCCATCTATCAGCTTACCCGCCACTTTATCATaGCCCTACCAAAGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSWLEMSTPTVESPSISLPATLS*PYQSPS
Trigger: AGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGG...TAAGCTGATAGATGGACTTTCCACTGTAGGAGTGGACATTTCAAGCCAACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAATTACAAGTCATTTGTaGAAACAGCCTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKITSHL*KQPSSC
Trigger: GCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAAT...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TACAACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACGCCATGTTGGGTGCCTaGTCCATAAATAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: YNLLRKYGGESSPLPLPYAMLGA*SINRRS
Trigger: ACTCCTCCTATTTATGGAGCAGGCACCCAACATGGC...GTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp ACATTACAAGTCATTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACACCATCACTAGAGGCTaGATCTTCTCCAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: TLQVICENSLPPATGSLYTITRG*IFSSTK
Trigger: TTTGGTGCTGGAGAAGATGCAGCCTCTAGTGATGGT...GTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGGATGGCTCTAGCTTCTaGCGCTTCTTCACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLDGSSF*RFFTSS
Trigger: TGAAGAGGTGAAGAAGCGGCAGAAGCTAGAGCCATC...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGGGCTGCTCTAATTCCCTCTaGAAGACCTCTATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLRKYGGESSPLPLPYQGCSNSL*KTSIFS
Trigger: AGAGAAGATAGAGGTCTTGCAGAGGGAATTAGAGCA...GCCCTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp AACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGAGGGTCTTTTGTAGCTaGAGGTTCTGTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NLLRKYGGESSPLPLPYQRVFCS*RFCSSS
Trigger: GCTGGAAGAACAGAACCTCCAGCTACAAAAGACCCT...CTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATACGCTCGTCTTCAATCTaGATGGATAGTTCTTTAACT +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQIRSSSI*MDSSLT
Trigger: AGTTAAAGAACTATCCATCCAGATTGAAGACGAGCG...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATATTAGGTCTGAATAATTaGGTCACCCATAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQILGLNN*VTHRNA
Trigger: TGCATTCCTATGGGTGACCCAATTATTCAGACCTAA...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCAGGAAAAGGCTCAGTTaGCTTGAAATGTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIRKRLS*LEMSTP
Trigger: AGGAGTGGACATTTCAAGCCAACTGAGCCTTTTCCT...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CCA 90 bp TGTCGGCACTTGAGGAAAAGGCTCAGTTGGCTTGAAATGTCCACTCCTACAGTGGGAAAAGCTGGTCTTTaGAGAGGTATGAATGTGCAG +
Preference number: 4 (lower is better)
Translates to: CRHLRKRLSWLEMSTPTVGKAGL*RGMNVQ
Trigger: CTGCACATTCATACCTCTCCAAAGACCAGCTTTTCC...CACTGTAGGAGTGGACATTTCAAGCCAACTGAGCCTTTTCCTCAAGTGCCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR GCA 90 bp CTCAGTTGGCTTGAAATGTCCACTCCTACAGTGGAAAGTCCATCTATCAGCTTAAACATACTCTGCCAATaGCCTGTCTCCTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LSWLEMSTPTVESPSISLNILCQ*PVSSEV
Trigger: GACTTCAGAGGAGACAGGGCATTGGCAGAGTATGTT...TAAGCTGATAGATGGACTTTCCACTGTAGGAGTGGACATTTCAAGCCAACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR TCA 90 bp GACACCTTTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAAGTCTTTGGAGAGGTATaGATGTGCAGATATAAAAAG +
Preference number: 4 (lower is better)
Translates to: DTFTFGICAASCQGSQVQVFGEV*MCRYKK
Trigger: CTTTTTATATCTGCACATTCATACCTCTCCAAAGAC...TTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAAAGGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp AATAGAGTAAGACTCTGTCCTAGCCGGGCTCCGCGCTCCCAGGCTTaGGTTCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: NRVRLCPSRAPRSQA*VRARARARARARAR
Trigger: CCGAGCCCGAGCCCGAGCCCGAGCCCGAGCCCGAGCCCGAACGCAAGCCTGGGAGCGCGGAGCCCGGCTAGGACAGAGTCTTACTCTATT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427934.2
CDS GCA 90 bp TCCAGCTCCCGACCTCGATCAGCCTCGACCCTCAGGACCGCCAGCTaGTTCTCCAACTCCCGGTCCCGGTGTCGCCCAGCCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSSRPRSASTLRTAS*FSNSRSRCRPATSW
Trigger: CCAGGAGGTGGCTGGGCGACACCGGGACCGGGAGTTGGAGAAGCAGCTGGCGGTCCTGAGGGTCGAGGCTGATCGAGGTCGGGAGCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp TCCTCCTGGGTCTCCCGAAGCGTCGTCTCCACTGCGGCCCGCCGCTaGCCCAGCACTGTTGCCTCTGCCTCGGCCACCATCTTAGCCTTG +
Preference number: 5 (lower is better)
Translates to: SSWVSRSVVSTAARR*PSTVASASATILAL
Trigger: CAAGGCTAAGATGGTGGCCGAGGCAGAGGCAACAGTGCTGGGGCAGCGGCGGGCCGCAGTGGAGACGACGCTTCGGGAGACCCAGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp CAAAGGTGTCCCGTGGGAGGCGGCTGTCCAGGCTCTTGCTCCGTTTaGGCTGTTCAGGGGGTAGCATCCGTGTTCGGCGGCCAGTCCGAC +
Preference number: 5 (lower is better)
Translates to: QRCPVGGGCPGSCSV*AVQGVASVFGGQSD
Trigger: GTCGGACTGGCCGCCGAACACGGATGCTACCCCCTGAACAGCGCAAACGGAGCAAGAGCCTGGACAGCCGCCTCCCACGGGACACCTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS GCA 90 bp CCCGTTCCTCAAAGGTGTCCCGTGGGAGGCGGCTGTCCAGGCTCTTaGTCCGTTTGCGCTGTTCAGGGGGTAGCATCCGTGTTCGGCGGC +
Preference number: 5 (lower is better)
Translates to: PVPQRCPVGGGCPGS*SVCAVQGVASVFGG
Trigger: GCCGCCGAACACGGATGCTACCCCCTGAACAGCGCAAACGGAGCAAGAGCCTGGACAGCCGCCTCCCACGGGACACCTTTGAGGAACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS GCA 90 bp CCGAAGCGTCGTCTCCACTGCGGCCCGCCGCTGCCCCAGCACTGTTaGCTCTGCCTCGGCCACCATCTTAGCCTTGGAAGCCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: PKRRLHCGPPLPQHC*LCLGHHLSLGSLFT
Trigger: TGTGAAGAGGCTTCCAAGGCTAAGATGGTGGCCGAGGCAGAGGCAACAGTGCTGGGGCAGCGGCGGGCCGCAGTGGAGACGACGCTTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp TTCTCCAACTCCCGGTCCCGGTGTCGCCCAGCCACCTCCTGGCTCTaGCGTTCTGCCTGCAGTTCCTTAAGCTCCTCCTGTGTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: FSNSRSRCRPATSWL*RSACSSLSSSCVRS
Trigger: GCTCCGGACACAGGAGGAGCTTAAGGAACTGCAGGCAGAACGGCAGAGCCAGGAGGTGGCTGGGCGACACCGGGACCGGGAGTTGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp CTTCTCAGCCTCACTGGCCCAATCCTTGGCCTGGCGCTGGGCATCTaGCACCTCCCGCCGGGCCTTTTCCTTATAATCCTCCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LLSLTGPILGLALGI*HLPPGLFLIILQLG
Trigger: GCCCAGCTGGAGGATTATAAGGAAAAGGCCCGGCGGGAGGTGGCAGATGCCCAGCGCCAGGCCAAGGATTGGGCCAGTGAGGCTGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp TGCCGGGCCCTGTCGTCCTGGGAACGCTTCTTGTTCTCTGCCTCTTaGTCCAGCCCCTGCAGTCGCTGGGCCAGTAGCTCTTTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: CRALSSWERFLFSAS*SSPCSRWASSSLSS
Trigger: GCTGGACAAAGAGCTACTGGCCCAGCGACTGCAGGGGCTGGAGCAAGAGGCAGAGAACAAGAAGCGTTCCCAGGACGACAGGGCCCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp AGGGCCCCCTTCAGGGCTGTCAACTCCCGCTCCCGCAGCCTCAGCTaGTCCTCTACTCGCTGTTTCCCCTCCAAGACCTCTTCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: RAPFRAVNSRSRSLS*SSTRCFPSKTSSRS
Trigger: ACTTCTGGAAGAGGTCTTGGAGGGGAAACAGCGAGTAGAGGAGCAGCTGAGGCTGCGGGAGCGGGAGTTGACAGCCCTGAAGGGGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp GCATCTTGCATGCTCCTGCGGAGCTGCTCTGTGTCTCGCTGGTACTaGTGCCGGACATGTTCCACCTCCTGGTCACGGGAGGCTACCTCC +
Preference number: 5 (lower is better)
Translates to: ASCMLLRSCSVSRWY*CRTCSTSWSREATS
Trigger: GGAGGTAGCCTCCCGTGACCAGGAGGTGGAACATGTCCGGCAGCAGTACCAGCGAGACACAGAGCAGCTCCGCAGGAGCATGCAAGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp AACTCCTTGTTCAGTCGGTCCACAGTCCTGTCCAGCAAACGCTTCTaGTCCTCCAGCTCAGCCTTGCCTCGCCGGAGCACCTCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: NSLFSRSTVLSSKRF*SSSSALPRRSTSRC
Trigger: GCAGCGGGAGGTGCTCCGGCGAGGCAAGGCTGAGCTGGAGGAGCAGAAGCGTTTGCTGGACAGGACTGTGGACCGACTGAACAAGGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp TCTTGCATGCTCCTGCGGAGCTGCTCTGTGTCTCGCTGGTACTGCTaGCGGACATGTTCCACCTCCTGGTCACGGGAGGCTACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SCMLLRSCSVSRWYC*RTCSTSWSREATSS
Trigger: AGAGGAGGTAGCCTCCCGTGACCAGGAGGTGGAACATGTCCGGCAGCAGTACCAGCGAGACACAGAGCAGCTCCGCAGGAGCATGCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp CGGCCTCCAGCACTGCATGGTCCTGGGTTGCATCTTGCATGCTCCTaGGGAGCTGCTCTGTGTCTCGCTGGTACTGCTGCCGGACATGTT +
Preference number: 5 (lower is better)
Translates to: RPPALHGPGLHLACS*GAALCLAGTAAGHV
Trigger: AACATGTCCGGCAGCAGTACCAGCGAGACACAGAGCAGCTCCGCAGGAGCATGCAAGATGCAACCCAGGACCATGCAGTGCTGGAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp CCACCAGACCTCGAGTCTCCTTCAGCTGCTGCTCCAAACCCAGGATaGGCCGGCGGAATTCGTCATTTTCCTCCTGGGTCTCCCGAAGCG +
Preference number: 5 (lower is better)
Translates to: PPDLESPSAAAPNPG*AGGIRHFPPGSPEA
Trigger: CGCTTCGGGAGACCCAGGAGGAAAATGACGAATTCCGCCGGCGCATCCTGGGTTTGGAGCAGCAGCTGAAGGAGACTCGAGGTCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CCA 90 bp TGGGTTGCATCTTGCATGCTCCTGCGGAGCTGCTCTGTGTCTCGCTaGTACTGCTGCCGGACATGTTCCACCTCCTGGTCACGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: WVASCMLLRSCSVSR*YCCRTCSTSWSREA
Trigger: AGCCTCCCGTGACCAGGAGGTGGAACATGTCCGGCAGCAGTACCAGCGAGACACAGAGCAGCTCCGCAGGAGCATGCAAGATGCAACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGTCCCTCTCCCAGTTCTGGAGCTCCTTGTaGCTCTGCTGGGCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: AGPDPRHFIMTLPKSLSQFWSSL*LCWASP
Trigger: GGGGGAGGCCCAGCAGAGCAACAAGGAGCTCCAGAA...CTGGGAGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGTCCTCCAGCTCAGCCTaGCCTCGCCGGAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: WQRNPNSSLNQSLGQQGRSSSSA*PRRSTS
Trigger: GGAGGTGCTCCGGCGAGGCAAGGCTGAGCTGGAGGA...CCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp AGCACTGCATGGTCCTGGGTTGCATCTTGCATGCTCCTGCGGAGCTaGTCTGTGTCTCGCTGGTACTGCTGCCGGACATGTTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: STAWSWVASCMLLRS*SVSRWYCCRTCSTS
Trigger: GGAGGTGGAACATGTCCGGCAGCAGTACCAGCGAGACACAGAGCAGCTCCGCAGGAGCATGCAAGATGCAACCCAGGACCATGCAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp ACCGCTTCCCCACCATCCACCAGACCTCGAGTCTCCTTCAGCTGCTaGTCCAAACCCAGGATGCGCCGGCGGAATTCGTCATTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: TASPPSTRPRVSFSC*SKPRMRRRNSSFSS
Trigger: GGAGGAAAATGACGAATTCCGCCGGCGCATCCTGGGTTTGGAGCAGCAGCTGAAGGAGACTCGAGGTCTGGTGGATGGTGGGGAAGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp TCCACCGCTTCCCCACCATCCACCAGACCTCGAGTCTCCTTCAGCTaGTGCTCCAAACCCAGGATGCGCCGGCGGAATTCGTCATTTTCC +
Preference number: 5 (lower is better)
Translates to: STASPPSTRPRVSFS*CSKPRMRRRNSSFS
Trigger: GGAAAATGACGAATTCCGCCGGCGCATCCTGGGTTTGGAGCAGCAGCTGAAGGAGACTCGAGGTCTGGTGGATGGTGGGGAAGCGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp TTCTCCAGAGACTTGATCCGGGCCTGGAGCTGTTCATTGACCTCATaGTGCTCCTCCACCTCACGCTGGGCCTTCTTCCTCAGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: FSRDLIRAWSCSLTS*CSSTSRWAFFLRPS
Trigger: GGACGGCCTGAGGAAGAAGGCCCAGCGTGAGGTGGAGGAGCAGCATGAGGTCAATGAACAGCTCCAGGCCCGGATCAAGTCTCTGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS TCA 90 bp ATCCGTGTTCGGCGGCCAGTCCGACCCCGGGCCTGGCCTCCAAGTTaGCTGTCAAACTTGTTGATGAGTGAGTCCACTGAAGACAGGGGA +
Preference number: 5 (lower is better)
Translates to: IRVRRPVRPRAWPPS*LSNLLMSESTEDRG
Trigger: TCCCCTGTCTTCAGTGGACTCACTCATCAACAAGTTTGACAGTCAACTTGGAGGCCAGGCCCGGGGTCGGACTGGCCGCCGAACACGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS-3UTR CAA 90 bp TGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGCTAGAGGTCCAGTGGTaGGTGGACTGGCGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: WQRNPNSSLNQSLGQQGRLEVQW*VDWRSR
Trigger: ACGGGAGCGCCAGTCCACCAACCACTGGACCTCTAG...CCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATATCCAGCCGCTGCAGCTaGTCCCGTAGTCGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQISSRCS*SRSRAS
Trigger: GGAGGCACGACTACGGGACAAGCTGCAGCGGCTGGA...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CCA 90 bp GCCTCTTCACAGTCCTGTCGCAGTTGCTGGAGGGTCTTTTGTAGCTaGAGGTTCTGTTCTTCCAGCTCCCGACCTCGATCAGCCTCGACC +
Preference number: 5 (lower is better)
Translates to: ASSQSCRSCWRVFCS*RFCSSSSRPRSAST
Trigger: GGTCGAGGCTGATCGAGGTCGGGAGCTGGAAGAACAGAACCTCCAGCTACAAAAGACCCTCCAGCAACTGCGACAGGACTGTGAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACTGGGGCAGCAGGGAAGGGAGCTGCTGCAGGGCTaGCTTAGAGTCCTCCCCGAT +
Preference number: 5 (lower is better)
Translates to: WQRNPNSSLNQSLGQQGRELLQG*LRVLPD
Trigger: ATCGGGGAGGACTCTAAGCAAGCCCTGCAGCAGCTC...CCTTCCCTGCTGCCCCAGTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS TCA 90 bp AGATTTTGTCACACTCCAGGTCCTGCCGAGCAGACCTTTCCTGCATaGGCTCTGTCCTCAGCTGATCCACCTGGTCCCGGCCACGATTCA +
Preference number: 5 (lower is better)
Translates to: RFCHTPGPAEQTFPA*ALSSADPPGPGHDS
Trigger: TGAATCGTGGCCGGGACCAGGTGGATCAGCTGAGGACAGAGCTCATGCAGGAAAGGTCTGCTCGGCAGGACCTGGAGTGTGACAAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000473377.5
CDS CCA 90 bp AGGTTTCACTTTCTGAGCTTCCCTCCCTCAGGATGCCATAGATGGTaGCCTTCATATGGTCCACACTGCCTGGTGGGGCTGCCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: RFHFLSFPPSGCHRW*PSYGPHCLVGLPPA
Trigger: AGCAGGAGGCAGCCCCACCAGGCAGTGTGGACCATATGAAGGCCACCATCTATGGCATCCTGAGGGAGGGAAGCTCAGAAAGTGAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000416743.1
CDS-3UTR CAA 90 bp GCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGTCCCTCTCCCAGCCTTATCTCCTTGCCTaGGCTAAGGCACTGACAGGA +
Preference number: 5 (lower is better)
Translates to: AGPDPRHFIMTLPKSLSQPYLLA*AKALTG
Trigger: TCCTGTCAGTGCCTTAGCCAAGGCAAGGAGATAAGG...CTGGGAGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCCCCTTGGTTCTCTTATaGAAGTTGGGCACATGTGGT +
Preference number: 5 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFPLVLL*KLGTCG
Trigger: ACCACATGTGCCCAACTTCAATAAGAGAACCAAGGG...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS TCA 90 bp GCTCCTCATCAGATGTGCTGCTCTGCGAGGGGGCAGGAAATCCCTTaGCCTGAGAGTAGGGGTTCTCAGGGAGTTCCAAATCTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: APHQMCCSARGQEIP*PESRGSQGVPNLSS
Trigger: TGAGCTCAGATTTGGAACTCCCTGAGAACCCCTACTCTCAGGTCAAGGGATTTCCTGCCCCCTCGCAGAGCAGCACATCTGATGAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000271636.12
ENST00000427934.2
ENST00000502442.1
ENST00000505188.5
CDS-3UTR CAA 90 bp ACCCCTTGCAAAGCCCTGAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTCCTTTCTCCCCACTGTaGAGCACCACAAAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: TPCKALNQSQAPQKMRVPPFSPL*STTKGC
Trigger: GCAGCCCTTTGTGGTGCTCAACAGTGGGGAGAAAGG...AGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTCAGGGCTTTGCAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TACCAAAGTCCCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCTGGTCATTGGCCCCCTaGATTTGGACCCCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: YQSPSPRGHWQRNPNSSLWSLAP*IWTPKE
Trigger: CTCCTTTGGGGTCCAAATCAAGGGGGCCAATGACCA...GAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGGGACTTTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATTCACTGGCCCAATCCTaGGCCTGGCGCTGGGCATCT +
Preference number: 5 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYSLAQS*AWRWAS
Trigger: AGATGCCCAGCGCCAGGCCAAGGATTGGGCCAGTGA...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TACCAAAGTCCCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCCGGGTCTTCAGGTCCTaGTTCTGTCTCTCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: YQSPSPRGHWQRNPNSSLRVFRS*FCLSKE
Trigger: CTCCTTGGAGAGACAGAACAAGGACCTGAAGACCCG...GAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGGGACTTTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp CCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACCTCTCCCAGGGGTCATaGGCAGAGAAACCCCAACAG +
Preference number: 5 (lower is better)
Translates to: PLPGVIGRETPTALSINHLSQGS*AEKPQQ
Trigger: CTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAG...GTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS TCA 90 bp CTCAGGCCGTCCAGTCGCTCAATTTCCTCTTCTGCTTCATCCACCTaGCGCTTCAAAGCCTTCACCCTCAGGCTTAGCTGGTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: LRPSSRSISSSASST*RFKAFTLRLSWSFW
Trigger: CCAGAAAGACCAGCTAAGCCTGAGGGTGAAGGCTTTGAAGCGTCAGGTGGATGAAGCAGAAGAGGAAATTGAGCGACTGGACGGCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS TCA 90 bp CGTAGACACTGTCGAATTCCTCATCTGAGCTCAGCCCTTCGTTTTTaGGAGCTGACTCAGCAGCTGAGCGGGAAGCTTTGCGCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: RRHCRIPHLSSALRF*ELTQQLSGKLCARS
Trigger: ACTCCTGGCGCAAAGCTTCCCGCTCAGCTGCTGAGTCAGCTCTCAAAAACGAAGGGCTGAGCTCAGATGAGGAATTCGACAGTGTCTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS GCA 90 bp CGGCTAAAGCCACTGAGAGGACTCAGGTTCTGGCTCTGGGCTGGCTaGTTCGAAGTGCCCACATGGTTGTCATATTTTGTGCTAGAGGTC +
Preference number: 5 (lower is better)
Translates to: RLKPLRGLRFWLWAG*FEVPTWLSYFVLEV
Trigger: GACCTCTAGCACAAAATATGACAACCATGTGGGCACTTCGAAGCAGCCAGCCCAGAGCCAGAACCTGAGTCCTCTCAGTGGCTTTAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS GCA 90 bp TTGAGCACCTCAACCTGGCGAGTATCTCCAGCACTAGCTCGGGCCTaGTCTAATTCCCTCTGCAAGACCTCTATCTTCTCTCCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: LSTSTWRVSPALARA*SNSLCKTSIFSPSS
Trigger: GGAGCTTGGAGAGAAGATAGAGGTCTTGCAGAGGGAATTAGAGCAGGCCCGAGCTAGTGCTGGAGATACTCGCCAGGTTGAGGTGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000464886.1
CDS CCA 90 bp TCAGGACCCTGGACATGTTTCAGCTTGTTCTGCAGCTCCATCACCTaGGTCTCCAGCCCATGTCGTAAATCTTCACCCTGGTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: SGPWTCFSLFCSSIT*VSSPCRKSSPWSKR
Trigger: CCTCTTGGACCAGGGTGAAGATTTACGACATGGGCTGGAGACCCAGGTGATGGAGCTGCAGAACAAGCTGAAACATGTCCAGGGTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GGTATGGGGACTACCACATGGGCCCCATACTTGTGCAAAGAAATGGGTAGAGCCATTGGCCCCCTTGATTaGGACCCCAAAGGAGTCACC +
Preference number: 5 (lower is better)
Translates to: GMGTTTWAPYLCKEMGRAIGPLD*DPKGVT
Trigger: GGTGACTCCTTTGGGGTCCAAATCAAGGGGGCCAAT...GGCTCTACCCATTTCTTTGCACAAGTATGGGGCCCATGTGGTAGTCCCCATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TGTCGGCACTTGAGGAAAAGGCTCAGTTGGCTTGAAATGTCCACTCCTACAGTGGAGGCCCCTTGGTCATaGGCCCCCTTGATTTGGACC +
Preference number: 5 (lower is better)
Translates to: CRHLRKRLSWLEMSTPTVEAPWS*APLIWT
Trigger: GGTCCAAATCAAGGGGGCCAATGACCAAGGGGCCTC...CACTGTAGGAGTGGACATTTCAAGCCAACTGAGCCTTTTCCTCAAGTGCCGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCCGGCTGTCCAGGCTCTaGCTCCGTTTGCGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIRLSRL*LRLRCS
Trigger: TGAACAGCGCAAACGGAGCAAGAGCCTGGACAGCCG...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGTCCTGGGTTGCATCTaGCATGCTCCTGCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYVLGCI*HAPAEL
Trigger: CAGCTCCGCAGGAGCATGCAAGATGCAACCCAGGAC...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp ACCCCTTGCAAAGCCCTGAATCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGCAGGAGTTCCTGCTaGGTGGCTCTAAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: TPCKALNQSQAPQKMRVPCRSSC*VALRSS
Trigger: GGAGGATCTTAGAGCCACCAAGCAGGAACTCCTGCA...AGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGATTCAGGGCTTTGCAAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp CAGGGTGGGCAGAGCAGAGCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCGAAAATGAGGGTCCCTaGGTTCTCTTATTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: QGGQSRAALAGIGLEPGFENEGP*VLLLKL
Trigger: CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTC...GAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGCTCTGCTCTGCCCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp TCCAGCTTTCGCTGTAGCTCCTCCACTTTTCGGGTAAGCTCACCCTaGCCTGCCACGGCCTTAGTAGAACCAGAAGAAACCATCACTAGA +
Preference number: 5 (lower is better)
Translates to: SSFRCSSSTFRVSSP*PATALVEPEETITR
Trigger: TCTAGTGATGGTTTCTTCTGGTTCTACTAAGGCCGTGGCAGGGCAGGGTGAGCTTACCCGAAAAGTGGAGGAGCTACAGCGAAAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 90 bp TGCTTGGTGGCTCTAAGATCCTCCTTGTTCTTCTGGAACATACTCTaGCAATGCCCTGTCTCCTCTGAAGTCTCCTCCAGCTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: CLVALRSSLFFWNIL*QCPVSSEVSSSSLC
Trigger: GCAGAGGGAGCTGGAGGAGACTTCAGAGGAGACAGGGCATTGGCAGAGTATGTTCCAGAAGAACAAGGAGGATCTTAGAGCCACCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000464886.1
CDS CCA 90 bp ACCATCTTAGCCTTGGAAGCCTCTTCACAGTCCTGTCGCAGTTGCTaGAGGGTCTTTTGTAGCTGGAGGTTCTGTTCTTCCAGCTCCCGA +
Preference number: 5 (lower is better)
Translates to: TILALEASSQSCRSC*RVFCSWRFCSSSSR
Trigger: TCGGGAGCTGGAAGAACAGAACCTCCAGCTACAAAAGACCCTCCAGCAACTGCGACAGGACTGTGAAGAGGCTTCCAAGGCTAAGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TACCAAAGTCCCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCTGGACATGTTTCAGCTaGTTCTGCAGCTCCATCACC +
Preference number: 5 (lower is better)
Translates to: YQSPSPRGHWQRNPNSSLWTCFS*FCSSIT
Trigger: GGTGATGGAGCTGCAGAACAAGCTGAAACATGTCCA...GAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGGGACTTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATCTGCATGGTCCTGGGTaGCATCTTGCATGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYLHGPG*HLACSC
Trigger: GCAGGAGCATGCAAGATGCAACCCAGGACCATGCAG...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGGGCACATGTGGTCAGAGATGGGCCAGTAGCTCTTaGTCCAGCCGGGCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: ENEGPLVLLLKLGTCGQRWASSS*SSRAVS
Trigger: GGACACAGCCCGGCTGGACAAAGAGCTACTGGCCCA...TCTCTGACCACATGTGCCCAACTTCAATAAGAGAACCAAGGGACCCTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGGCTGAGCGGGAAGCTTaGCGCCAGGAGTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLAEREA*RQESFS
Trigger: GGAGAAGGACTCCTGGCGCAAAGCTTCCCGCTCAGC...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GGTATGGGGACTACCACATGGGCCCCATACTTGTGCAAAGAAATGGGTAGAGCCGAGCTGGTCTGTAGGTaGCTCTCCGTAAGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: GMGTTTWAPYLCKEMGRAELVCR*LSVSSD
Trigger: ATCACTGCTTACGGAGAGCAACCTACAGACCAGCTC...GGCTCTACCCATTTCTTTGCACAAGTATGGGGCCCATGTGGTAGTCCCCATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGTCCCTCTCCCAGCTTTACTTTTGGAATTaGTGCAGCCAGTTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: AGPDPRHFIMTLPKSLSQLYFWN*CSQLSG
Trigger: CCCTGACAACTGGCTGCACAAATTCCAAAAGTAAAG...CTGGGAGAGGGACTTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GAGGGCCCTGGCTGGGGAAAAGCTGGTCTTTGGAGAGGTATGAATGTGCAGATACTTCCCTACCAGGGCTaGGTTCTCCCCAAAATCCAA +
Preference number: 5 (lower is better)
Translates to: EGPGWGKAGLWRGMNVQILPYQG*VLPKIQ
Trigger: TTGGATTTTGGGGAGAACCAAGCCCTGGTAGGGAAG...TATCTGCACATTCATACCTCTCCAAAGACCAGCTTTTCCCCAGCCAGGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGCGGAGCAGCTCCTTCTaGAGCACCTCAACCTGGCGA +
Preference number: 5 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLRSSSF*STSTWR
Trigger: TCGCCAGGTTGAGGTGCTCAAGAAGGAGCTGCTCCG...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GACACCTTTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAAGCCACCATCTTAGCCTaGGAAGCCTCTTCACAGTCC +
Preference number: 5 (lower is better)
Translates to: DTFTFGICAASCQGSQVQATILA*EASSQS
Trigger: GGACTGTGAAGAGGCTTCCAAGGCTAAGATGGTGGC...TTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAAAGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GGTATGGGGACTACCACATGGGCCCCATACTTGTGCAAAGAAATGGGTAGAGCCATCTTCTCCAACTCCTaGTTCAGTCGGTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: GMGTTTWAPYLCKEMGRAIFSNS*FSRSTV
Trigger: GACTGTGGACCGACTGAACAAGGAGTTGGAGAAGAT...GGCTCTACCCATTTCTTTGCACAAGTATGGGGCCCATGTGGTAGTCCCCATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp AACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGTCCTTCTCCAGAGACTaGATCCGGGCCTGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: NLLRKYGGESSPLPLPYQSFSRD*IRAWSC
Trigger: ACAGCTCCAGGCCCGGATCAAGTCTCTGGAGAAGGA...CTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS TCA 90 bp ATGGGAAAAGAGAGAGAAACCCAAGTACCTGGGCCAAGGCTGAGGTaGAGAGACTCAGAAACTGAGGTACTGGAGGCAGTACCACGTAGA +
Preference number: 5 (lower is better)
Translates to: MGKERETQVPGPRLR*RDSETEVLEAVPRR
Trigger: TCTACGTGGTACTGCCTCCAGTACCTCAGTTTCTGAGTCTCTTCACCTCAGCCTTGGCCCAGGTACTTGGGTTTCTCTCTCTTTTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS-3UTR CAA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGCGGGGCTCAGCCATGTaGGGTGCCTGCTCCATAAAT +
Preference number: 5 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLRGSAM*GACSIN
Trigger: ATTTATGGAGCAGGCACCCAACATGGCTGAGCCCCG...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp ATGAAAACCCTGAGCAGGACCAGACCCCCGCCACTTTATCATGACCCTACCAAAGGCCTGGCCTCCAAGTaGACTGTCAAACTTGTTGAT +
Preference number: 5 (lower is better)
Translates to: MKTLSRTRPPPLYHDPTKGLASK*TVKLVD
Trigger: ATCAACAAGTTTGACAGTCAACTTGGAGGCCAGGCC...TTTGGTAGGGTCATGATAAAGTGGCGGGGGTCTGGTCCTGCTCAGGGTTTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCAGGTCTGGAGTTGATTaGAACTGCAGCATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIRSGVD*NCSMVG
Trigger: CCCCACCATGCTGCAGTTCAAATCAACTCCAGACCT...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTCTCTCCAAGGAGATTTaGTCACACTCCAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLLSKEI*SHSRSC
Trigger: GCAGGACCTGGAGTGTGACAAAATCTCCTTGGAGAG...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTTGGTCTTTCTGGTCATaGACATGCTGCCGCTCGTCT +
Preference number: 5 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLWSFWS*TCCRSS
Trigger: AGACGAGCGGCAGCATGTCAATGACCAGAAAGACCA...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TACAACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACGCCTGGAGCTGTTCATaGACCTCATGCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: YNLLRKYGGESSPLPLPYAWSCS*TSCCSS
Trigger: GGAGGAGCAGCATGAGGTCAATGAACAGCTCCAGGC...GTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp AACCTGCTTAGGAAATATGGAGGTGAATCATCCCCCTTACCTCTTCCCTACCAGAATTTGTGCAGCCAGTaGTCAGGGCTCCCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: NLLRKYGGESSPLPLPYQNLCSQ*SGLPGA
Trigger: TGCACCTGGGAGCCCTGACAACTGGCTGCACAAATT...CTGGTAGGGAAGAGGTAAGGGGGATGATTCACCTCCATATTTCCTAAGCAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATGGAGGTGAATAGCTCCAGCATGCTGTaGCTTCTGTTACTAGGATCC +
Preference number: 5 (lower is better)
Translates to: FLLPPAPYTTCLGNMEVNSSSML*LLLLGS
Trigger: GGATCCTAGTAACAGAAGCAACAGCATGCTGGAGCT...ATTCACCTCCATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TGCAGATATAAAAAGCAAGAAGAGCATCCTTATCTCCTTGCCTTGGCTAAGGCAAGGCTCTTGCTCCGTTaGCGCTGTTCAGGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: CRYKKQEEHPYLLALAKARLLLR*RCSGGS
Trigger: GCTACCCCCTGAACAGCGCAAACGGAGCAAGAGCCT...TGCCTTAGCCAAGGCAAGGAGATAAGGATGCTCTTCTTGCTTTTTATATCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp CCTCTCCCAGGGGTCATTGGCAGAGAAACCCCAACAGCTCTCTCAATCAATCACGAAGTGCCCACATGGTaGTCATATTTTGTGCTAGAG +
Preference number: 5 (lower is better)
Translates to: PLPGVIGRETPTALSINHEVPTW*SYFVLE
Trigger: CTCTAGCACAAAATATGACAACCATGTGGGCACTTC...GTGATTGATTGAGAGAGCTGTTGGGGTTTCTCTGCCAATGACCCCTGGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GACACCTTTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACGCTCCAGTTTTCGATaGGTAGACTGCAGAACTGTC +
Preference number: 5 (lower is better)
Translates to: DTFTFGICAASCQGSQVQRSSFR*VDCRTV
Trigger: GACAGTTCTGCAGTCTACCAATCGAAAACTGGAGCG...TTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAAAGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp ACATTACAAGTCATTTGTGAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACCTCAGCCCTTCGTTTTaGAGAGCTGACTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TLQVICENSLPPATGSLYLSPSF*RADSAA
Trigger: AGCTGCTGAGTCAGCTCTCAAAAACGAAGGGCTGAG...GTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTCACAAATGACTTGTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp CTCAGTTGGCTTGAAATGTCCACTCCTACAGTGGAAAGTCCATCTATCAGCTTAGGGAGGTGTCGGCACTaGAGGAAAAGGCTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: LSWLEMSTPTVESPSISLGRCRH*RKRLSW
Trigger: CCAACTGAGCCTTTTCCTCAAGTGCCGACACCTCCC...TAAGCTGATAGATGGACTTTCCACTGTAGGAGTGGACATTTCAAGCCAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTTGGAAGGAAAATGAGTaGCAGGAATCCAGGGAGCAC +
Preference number: 5 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLWKENE*QESREH
Trigger: GTGCTCCCTGGATTCCTGCAACTCATTTTCCTTCCA...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCCACAGTTCTCTTATTGAAGTaGGGCACATGTGGTCAGAGA +
Preference number: 5 (lower is better)
Translates to: VQPVVRAPRCNHLITISTVLLLK*GTCGQR
Trigger: TCTCTGACCACATGTGCCCAACTTCAATAAGAGAAC...TGTGGATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GAAAACAGCCTTCCTCCTGCCACCGGCTCCCTATACAACCTGCTTAGGAAATATTCAGCTTCTAACCCCTaGCAAAGCCCTGAATCAGAG +
Preference number: 5 (lower is better)
Translates to: ENSLPPATGSLYNLLRKYSASNP*QSPESE
Trigger: CTCTGATTCAGGGCTTTGCAAGGGGTTAGAAGCTGA...ATATTTCCTAAGCAGGTTGTATAGGGAGCCGGTGGCAGGAGGAAGGCTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp CTCAGTTGGCTTGAAATGTCCACTCCTACAGTGGAAAGTCCATCTATCAGCTTATCCTGGGAACGCTTCTaGTTCTCTGCCTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LSWLEMSTPTVESPSISLSWERF*FSASCS
Trigger: GGAGCAAGAGGCAGAGAACAAGAAGCGTTCCCAGGA...TAAGCTGATAGATGGACTTTCCACTGTAGGAGTGGACATTTCAAGCCAACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCAAAGGCTCAGTTGGCTaGAAATGTCCACTCCTACAG +
Preference number: 5 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIKGSVG*KCPLLQ
Trigger: CTGTAGGAGTGGACATTTCAAGCCAACTGAGCCTTT...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp ATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCGCTCTAAGATCCTCCTaGTTCTTCTGGAACATACTC +
Preference number: 5 (lower is better)
Translates to: ICAASCQGSQVQPPYNHIALRSS*FFWNIL
Trigger: GAGTATGTTCCAGAAGAACAAGGAGGATCTTAGAGC...GATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TCAGAGCCAAGCACCTCAGAAAATGAGGGTCCCTTGGTTCTCTTATTGAAGTTGGGGAAAAGCTGGTCTTaGGAGAGGTATGAATGTGCA +
Preference number: 5 (lower is better)
Translates to: SEPSTSENEGPLVLLLKLGKSWS*ERYECA
Trigger: TGCACATTCATACCTCTCCAAAGACCAGCTTTTCCC...CAACTTCAATAAGAGAACCAAGGGACCCTCATTTTCTGAGGTGCTTGGCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp TTACTTTTGGAATTTGTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTCTGACACCTTTACTTTaGGAATTTGTGCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: LLLEFVQPVVRAPRCNHLLTPLL*EFVQPV
Trigger: AACTGGCTGCACAAATTCCAAAAGTAAAGGTGTCAG...AAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCACAAATTCCAAAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS-3UTR CAA 90 bp GTGCAGCCAGTTGTCAGGGCTCCCAGGTGCAACCACCTTATAACCATATCCACAAATAAATGTCTTCCGTaGCCTCTTCCCATTTTTACA +
Preference number: 5 (lower is better)
Translates to: VQPVVRAPRCNHLITISTNKCLP*PLPIFT
Trigger: TGTAAAAATGGGAAGAGGCAACGGAAGACATTTATT...TGTGGATATGGTTATAAGGTGGTTGCACCTGGGAGCCCTGACAACTGGCTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS TCA 90 bp TCCAGTTTTCGATTGGTAGACTGCAGAACTGTCTTCTCCCTAAGGTaGGGTAGAAGAATGTCTATGAGTGTCCCCATTTCTAAGGGAATC +
Preference number: 5 (lower is better)
Translates to: SSFRLVDCRTVFSLR*GRRMSMSVPISKGI
Trigger: GATTCCCTTAGAAATGGGGACACTCATAGACATTCTTCTACCTCACCTTAGGGAGAAGACAGTTCTGCAGTCTACCAATCGAAAACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467998.1
CDS-3UTR CAA 90 bp TGCAGATATAAAAAGCAAGAAGAGCATCCTTATCTCCTTGCCTTGGCTAAGGCAACATGGGCCCCATACTaGTGCAAAGAAATGGGTAGA +
Preference number: 5 (lower is better)
Translates to: CRYKKQEEHPYLLALAKATWAPY*CKEMGR
Trigger: TCTACCCATTTCTTTGCACAAGTATGGGGCCCATGT...TGCCTTAGCCAAGGCAAGGAGATAAGGATGCTCTTCTTGCTTTTTATATCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 72 bp GTCTCCCGAAGCGTCGTCTCCACTGCGGCCCGCCGCTaGCCCAGCACTGTTGCCTCTGCCTCGGCCACCATC +
Preference number: 6 (lower is better)
Translates to: VSRSVVSTAARR*PSTVASASATI
Trigger: GATGGTGGCCGAGGCAGAGGCAACAGTGCTGGGGCAGCGGCGGGCCGCAGTGGAGACGACGCTTCGGGAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 72 bp CGACCTCGATCAGCCTCGACCCTCAGGACCGCCAGCTaGTTCTCCAACTCCCGGTCCCGGTGTCGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: RPRSASTLRTAS*FSNSRSRCRPA
Trigger: GGCTGGGCGACACCGGGACCGGGAGTTGGAGAAGCAGCTGGCGGTCCTGAGGGTCGAGGCTGATCGAGGTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 72 bp CCCGTGGGAGGCGGCTGTCCAGGCTCTTGCTCCGTTTaGGCTGTTCAGGGGGTAGCATCCGTGTTCGGCGGC +
Preference number: 6 (lower is better)
Translates to: PVGGGCPGSCSV*AVQGVASVFGG
Trigger: GCCGCCGAACACGGATGCTACCCCCTGAACAGCGCAAACGGAGCAAGAGCCTGGACAGCCGCCTCCCACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS GCA 72 bp CGTCTCCACTGCGGCCCGCCGCTGCCCCAGCACTGTTaGCTCTGCCTCGGCCACCATCTTAGCCTTGGAAGC +
Preference number: 6 (lower is better)
Translates to: RLHCGPPLPQHC*LCLGHHLSLGS
Trigger: GCTTCCAAGGCTAAGATGGTGGCCGAGGCAGAGGCAACAGTGCTGGGGCAGCGGCGGGCCGCAGTGGAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CCA 72 bp AGCTCTTTGTCCAGCCGGGCTGTGTCCCGCTCAGCCTaGGATGCCTGCAGGGCCTGCCGCAGCCTCTGGATC +
Preference number: 6 (lower is better)
Translates to: SSLSSRAVSRSA*DACRACRSLWI
Trigger: GATCCAGAGGCTGCGGCAGGCCCTGCAGGCATCCCAGGCTGAGCGGGACACAGCCCGGCTGGACAAAGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CCA 72 bp GGTGGACTGGCGCTCCCGTTCCTCAAAGGTGTCCCGTaGGAGGCGGCTGTCCAGGCTCTTGCTCCGTTTGCG +
Preference number: 6 (lower is better)
Translates to: GGLALPFLKGVP*EAAVQALAPFA
Trigger: CGCAAACGGAGCAAGAGCCTGGACAGCCGCCTCCCACGGGACACCTTTGAGGAACGGGAGCGCCAGTCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS CCA 72 bp CCCAGGATGCGCCGGCGGAATTCGTCATTTTCCTCCTaGGTCTCCCGAAGCGTCGTCTCCACTGCGGCCCGC +
Preference number: 6 (lower is better)
Translates to: PRMRRRNSSFSS*VSRSVVSTAAR
Trigger: GCGGGCCGCAGTGGAGACGACGCTTCGGGAGACCCAGGAGGAAAATGACGAATTCCGCCGGCGCATCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CCA 72 bp GAGGTCTTCTCAGCCTCACTGGCCCAATCCTTGGCCTaGCGCTGGGCATCTGCCACCTCCCGCCGGGCCTTT +
Preference number: 6 (lower is better)
Translates to: EVFSASLAQSLA*RWASATSRRAF
Trigger: AAAGGCCCGGCGGGAGGTGGCAGATGCCCAGCGCCAGGCCAAGGATTGGGCCAGTGAGGCTGAGAAGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CAA 72 bp TCCCGTGGGAGGCGGCTGTCCAGGCTCTTGCTCCGTTaGCGCTGTTCAGGGGGTAGCATCCGTGTTCGGCGG +
Preference number: 6 (lower is better)
Translates to: SRGRRLSRLLLR*RCSGGSIRVRR
Trigger: CCGCCGAACACGGATGCTACCCCCTGAACAGCGCAAACGGAGCAAGAGCCTGGACAGCCGCCTCCCACGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS CAA 90 bp TCAAAGGTGTCCCGTGGGAGGCGGCTGTCCAGGCTCTTGCTCCGTTaGCGCTGTTCAGGGGGTAGCATCCGTGTTCGGCGGCCAGTCCGA +
Preference number: 6 (lower is better)
Translates to: SKVSRGRRLSRLLLR*RCSGGSIRVRRPVR
Trigger: TCGGACTGGCCGCCGAACACGGATGCTACCCCCTGAACAGCGCAAACGGAGCAAGAGCCTGGACAGCCGCCTCCCACGGGACACCTTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS CAA 90 bp TCCCGTTCCTCAAAGGTGTCCCGTGGGAGGCGGCTGTCCAGGCTCTaGCTCCGTTTGCGCTGTTCAGGGGGTAGCATCCGTGTTCGGCGG +
Preference number: 6 (lower is better)
Translates to: SRSSKVSRGRRLSRL*LRLRCSGGSIRVRR
Trigger: CCGCCGAACACGGATGCTACCCCCTGAACAGCGCAAACGGAGCAAGAGCCTGGACAGCCGCCTCCCACGGGACACCTTTGAGGAACGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS TCA 72 bp CTCCTCCAGCTCCCTCTGCAGCCCTCGCACAAGGGCTaGCATCTTCTGCCTCTCGGCCTCCAGCACTGCATG +
Preference number: 6 (lower is better)
Translates to: LLQLPLQPSHKG*HLLPLGLQHCM
Trigger: CATGCAGTGCTGGAGGCCGAGAGGCAGAAGATGTCAGCCCTTGTGCGAGGGCTGCAGAGGGAGCTGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000464886.1
CDS GCA 72 bp CCGCCTTTCTCCCCACTGTTGAGCACCACAAAGGGCTaGCCAGCGATTCCCTGCACACGCACAGCAACCCCG +
Preference number: 6 (lower is better)
Translates to: PPFSPLLSTTKG*PAIPCTRTATP
Trigger: CGGGGTTGCTGTGCGTGTGCAGGGAATCGCTGGGCAGCCCTTTGTGGTGCTCAACAGTGGGGAGAAAGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271636.12
ENST00000427934.2
ENST00000502442.1
ENST00000505188.5
CDS GCA 72 bp CAAAGGTGTCCCGTGGGAGGCGGCTGTCCAGGCTCTTaGTCCGTTTGCGCTGTTCAGGGGGTAGCATCCGTG +
Preference number: 6 (lower is better)
Translates to: QRCPVGGGCPGS*SVCAVQGVASV
Trigger: CACGGATGCTACCCCCTGAACAGCGCAAACGGAGCAAGAGCCTGGACAGCCGCCTCCCACGGGACACCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS GCA 72 bp CTCCTGCGGAGCTGCTCTGTGTCTCGCTGGTACTGCTaGCGGACATGTTCCACCTCCTGGTCACGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: LLRSCSVSRWYC*RTCSTSWSREA
Trigger: AGCCTCCCGTGACCAGGAGGTGGAACATGTCCGGCAGCAGTACCAGCGAGACACAGAGCAGCTCCGCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CCA 72 bp GTCGGCTCAGTCCTCCAGAGGTCTTCTCAGCCTCACTaGCCCAATCCTTGGCCTGGCGCTGGGCATCTGCCA +
Preference number: 6 (lower is better)
Translates to: VGSVLQRSSQPH*PNPWPGAGHLP
Trigger: TGGCAGATGCCCAGCGCCAGGCCAAGGATTGGGCCAGTGAGGCTGAGAAGACCTCTGGAGGACTGAGCCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS TCA 72 bp CACACTCCAGGTCCTGCCGAGCAGACCTTTCCTGCATaGGCTCTGTCCTCAGCTGATCCACCTGGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: HTPGPAEQTFPA*ALSSADPPGPG
Trigger: GCCGGGACCAGGTGGATCAGCTGAGGACAGAGCTCATGCAGGAAAGGTCTGCTCGGCAGGACCTGGAGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000473377.5
CDS GCA 72 bp ATGCTCCTGCGGAGCTGCTCTGTGTCTCGCTGGTACTaGTGCCGGACATGTTCCACCTCCTGGTCACGGGAG +
Preference number: 6 (lower is better)
Translates to: MLLRSCSVSRWY*CRTCSTSWSRE
Trigger: CTCCCGTGACCAGGAGGTGGAACATGTCCGGCAGCAGTACCAGCGAGACACAGAGCAGCTCCGCAGGAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 72 bp TCCCCACCATCCACCAGACCTCGAGTCTCCTTCAGCTaGTGCTCCAAACCCAGGATGCGCCGGCGGAATTCG +
Preference number: 6 (lower is better)
Translates to: SPPSTRPRVSFS*CSKPRMRRRNS
Trigger: CGAATTCCGCCGGCGCATCCTGGGTTTGGAGCAGCAGCTGAAGGAGACTCGAGGTCTGGTGGATGGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CCA 72 bp TCCTCGAGACCCTTCAGCTGCCGGGCCCTGTCGTCCTaGGAACGCTTCTTGTTCTCTGCCTCTTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSRPFSCRALSS*ERFLFSASCSS
Trigger: GCTGGAGCAAGAGGCAGAGAACAAGAAGCGTTCCCAGGACGACAGGGCCCGGCAGCTGAAGGGTCTCGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CAA 72 bp TCAAAGGTGTCCCGTGGGAGGCGGCTGTCCAGGCTCTaGCTCCGTTTGCGCTGTTCAGGGGGTAGCATCCGT +
Preference number: 6 (lower is better)
Translates to: SKVSRGRRLSRL*LRLRCSGGSIR
Trigger: ACGGATGCTACCCCCTGAACAGCGCAAACGGAGCAAGAGCCTGGACAGCCGCCTCCCACGGGACACCTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS TCA 72 bp GGACCCCAAAGGAGTCACCGCCTTTCTCCCCACTGTTaGGCACCACAAAGGGCTGCCCAGCGATTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: GPQRSHRLSPHC*APQRAAQRFPA
Trigger: TGCAGGGAATCGCTGGGCAGCCCTTTGTGGTGCTCAACAGTGGGGAGAAAGGCGGTGACTCCTTTGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271636.12
ENST00000427934.2
ENST00000502442.1
ENST00000505188.5
CDS TCA 72 bp TGGCCCCCTACTGTCCCCAAGGACTCCTCTCAGCCATaGGCTCCACCATTAGACTGGGCAGGATCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: WPPTVPKDSSQP*APPLDWAGSRA
Trigger: TGCCCTGGATCCTGCCCAGTCTAATGGTGGAGCTCATGGCTGAGAGGAGTCCTTGGGGACAGTAGGGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467998.1
CDS GCA 72 bp TTCAGGGCTGTCAACTCCCGCTCCCGCAGCCTCAGCTaGTCCTCTACTCGCTGTTTCCCCTCCAAGACCTCT +
Preference number: 6 (lower is better)
Translates to: FRAVNSRSRSLS*SSTRCFPSKTS
Trigger: AGAGGTCTTGGAGGGGAAACAGCGAGTAGAGGAGCAGCTGAGGCTGCGGGAGCGGGAGTTGACAGCCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CCA 72 bp GCCATAGATGGTGGCCTTCATATGGTCCACACTGCCTaGTGGGGCTGCCTCCTGCTGGTCTCGAAGGAGGTC +
Preference number: 6 (lower is better)
Translates to: AIDGGLHMVHTA*WGCLLLVSKEV
Trigger: GACCTCCTTCGAGACCAGCAGGAGGCAGCCCCACCAGGCAGTGTGGACCATATGAAGGCCACCATCTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000416743.1
CDS CAA 72 bp TGGACCCCAAAGGAGTCACCGCCTTTCTCCCCACTGTaGAGCACCACAAAGGGCTGCCCAGCGATTCCCTGC +
Preference number: 6 (lower is better)
Translates to: WTPKESPPFSPL*STTKGCPAIPC
Trigger: GCAGGGAATCGCTGGGCAGCCCTTTGTGGTGCTCAACAGTGGGGAGAAAGGCGGTGACTCCTTTGGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271636.12
ENST00000427934.2
ENST00000502442.1
ENST00000505188.5
CDS TCA 72 bp CGGCGGCCAGTCCGACCCCGGGCCTGGCCTCCAAGTTaGCTGTCAAACTTGTTGATGAGTGAGTCCACTGAA +
Preference number: 6 (lower is better)
Translates to: RRPVRPRAWPPS*LSNLLMSESTE
Trigger: TTCAGTGGACTCACTCATCAACAAGTTTGACAGTCAACTTGGAGGCCAGGCCCGGGGTCGGACTGGCCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS GCA 72 bp GGATGCCATAGATGGTGGCCTTCATATGGTCCACACTaGCTGGTGGGGCTGCCTCCTGCTGGTCTCGAAGGA +
Preference number: 6 (lower is better)
Translates to: GCHRWWPSYGPH*LVGLPPAGLEG
Trigger: TCCTTCGAGACCAGCAGGAGGCAGCCCCACCAGGCAGTGTGGACCATATGAAGGCCACCATCTATGGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000416743.1
CDS GCA 72 bp TGGTCCTGGGTTGCATCTTGCATGCTCCTGCGGAGCTaGTCTGTGTCTCGCTGGTACTGCTGCCGGACATGT +
Preference number: 6 (lower is better)
Translates to: WSWVASCMLLRS*SVSRWYCCRTC
Trigger: ACATGTCCGGCAGCAGTACCAGCGAGACACAGAGCAGCTCCGCAGGAGCATGCAAGATGCAACCCAGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 72 bp CCTCCAGCACTGCATGGTCCTGGGTTGCATCTTGCATaGTCCTGCGGAGCTGCTCTGTGTCTCGCTGGTACT +
Preference number: 6 (lower is better)
Translates to: PPALHGPGLHLA*SCGAALCLAGT
Trigger: AGTACCAGCGAGACACAGAGCAGCTCCGCAGGAGCATGCAAGATGCAACCCAGGACCATGCAGTGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 72 bp TCCAGCCGTGAGACTTTTTCCTCGAGACCCTTCAGCTaGCGGGCCCTGTCGTCCTGGGAACGCTTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: SSRETFSSRPFS*RALSSWERFLF
Trigger: GAACAAGAAGCGTTCCCAGGACGACAGGGCCCGGCAGCTGAAGGGTCTCGAGGAAAAAGTCTCACGGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS GCA 72 bp GACTTGATCCGGGCCTGGAGCTGTTCATTGACCTCATaGTGCTCCTCCACCTCACGCTGGGCCTTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: DLIRAWSCSLTS*CSSTSRWAFFL
Trigger: GAGGAAGAAGGCCCAGCGTGAGGTGGAGGAGCAGCATGAGGTCAATGAACAGCTCCAGGCCCGGATCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS CCA 72 bp TCTTGCATGCTCCTGCGGAGCTGCTCTGTGTCTCGCTaGTACTGCTGCCGGACATGTTCCACCTCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: SCMLLRSCSVSR*YCCRTCSTSWS
Trigger: TGACCAGGAGGTGGAACATGTCCGGCAGCAGTACCAGCGAGACACAGAGCAGCTCCGCAGGAGCATGCAAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CAA 72 bp TTCTCCAGAGACTTGATCCGGGCCTGGAGCTGTTCATaGACCTCATGCTGCTCCTCCACCTCACGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: FSRDLIRAWSCS*TSCCSSTSRWA
Trigger: GGCCCAGCGTGAGGTGGAGGAGCAGCATGAGGTCAATGAACAGCTCCAGGCCCGGATCAAGTCTCTGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS CAA 90 bp CCCTTGATTTGGACCCCAAAGGAGTCACCGCCTTTCTCCCCACTGTaGAGCACCACAAAGGGCTGCCCAGCGATTCCCTGCACACGCACA +
Preference number: 6 (lower is better)
Translates to: PLIWTPKESPPFSPL*STTKGCPAIPCTRT
Trigger: TGTGCGTGTGCAGGGAATCGCTGGGCAGCCCTTTGTGGTGCTCAACAGTGGGGAGAAAGGCGGTGACTCCTTTGGGGTCCAAATCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271636.12
ENST00000427934.2
ENST00000502442.1
ENST00000505188.5
CDS TCA 72 bp GCAGCACTTGCTGGGATAGGCCTCGAGCCTGGTTTCTaGGTCCTTGAGGACCACGAGCTAACAGGAGCTGGT +
Preference number: 6 (lower is better)
Translates to: AALAGIGLEPGF*VLEDHELTGAG
Trigger: ACCAGCTCCTGTTAGCTCGTGGTCCTCAAGGACTCAGAAACCAGGCTCGAGGCCTATCCCAGCAAGTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS GCA 72 bp CTCGAGTCTCCTTCAGCTGCTGCTCCAAACCCAGGATaGGCCGGCGGAATTCGTCATTTTCCTCCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: LESPSAAAPNPG*AGGIRHFPPGS
Trigger: AGACCCAGGAGGAAAATGACGAATTCCGCCGGCGCATCCTGGGTTTGGAGCAGCAGCTGAAGGAGACTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CAA 90 bp GAAGTGCCCACATGGTTGTCATATTTTGTGCTAGAGGTCCAGTGGTaGGTGGACTGGCGCTCCCGTTCCTCAAAGGTGTCCCGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: EVPTWLSYFVLEVQW*VDWRSRSSKVSRGR
Trigger: CCTCCCACGGGACACCTTTGAGGAACGGGAGCGCCAGTCCACCAACCACTGGACCTCTAGCACAAAATATGACAACCATGTGGGCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS CAA 90 bp CTCAGGTTCTGGCTCTGGGCTGGCTGCTTCGAAGTGCCCACATGGTaGTCATATTTTGTGCTAGAGGTCCAGTGGTTGGTGGACTGGCGC +
Preference number: 6 (lower is better)
Translates to: LRFWLWAGCFEVPTW*SYFVLEVQWLVDWR
Trigger: GCGCCAGTCCACCAACCACTGGACCTCTAGCACAAAATATGACAACCATGTGGGCACTTCGAAGCAGCCAGCCCAGAGCCAGAACCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS TCA 72 bp TGCTGGGATAGGCCTCGAGCCTGGTTTCTGAGTCCTTaGGGACCACGAGCTAACAGGAGCTGGTCTGTAGGT +
Preference number: 6 (lower is better)
Translates to: CWDRPRAWFLSP*GPRANRSWSVG
Trigger: ACCTACAGACCAGCTCCTGTTAGCTCGTGGTCCTCAAGGACTCAGAAACCAGGCTCGAGGCCTATCCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS GCA 72 bp CGCTGTAGCTCCTCCACTTTTCGGGTAAGCTCACCCTaGCCTGCCACGGCCTTAGTAGAACCAGAAGAAACC +
Preference number: 6 (lower is better)
Translates to: RCSSSTFRVSSP*PATALVEPEET
Trigger: GGTTTCTTCTGGTTCTACTAAGGCCGTGGCAGGGCAGGGTGAGCTTACCCGAAAAGTGGAGGAGCTACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CCA 72 bp TCATATTTTGTGCTAGAGGTCCAGTGGTTGGTGGACTaGCGCTCCCGTTCCTCAAAGGTGTCCCGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: SYFVLEVQWLVD*RSRSSKVSRGR
Trigger: CCTCCCACGGGACACCTTTGAGGAACGGGAGCGCCAGTCCACCAACCACTGGACCTCTAGCACAAAATATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS CCA 72 bp ATATGGTCCACACTGCCTGGTGGGGCTGCCTCCTGCTaGTCTCGAAGGAGGTCTGGAGTTGATTTGAACTGC +
Preference number: 6 (lower is better)
Translates to: IWSTLPGGAASC*SRRRSGVDLNC
Trigger: GCAGTTCAAATCAACTCCAGACCTCCTTCGAGACCAGCAGGAGGCAGCCCCACCAGGCAGTGTGGACCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000416743.1
CDS CCA 72 bp TTTCTGAGCTTCCCTCCCTCAGGATGCCATAGATGGTaGCCTTCATATGGTCCACACTGCCTGGTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: FLSFPPSGCHRW*PSYGPHCLVGL
Trigger: CAGCCCCACCAGGCAGTGTGGACCATATGAAGGCCACCATCTATGGCATCCTGAGGGAGGGAAGCTCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000416743.1
CDS CCA 72 bp CACTTTCTGAGCTTCCCTCCCTCAGGATGCCATAGATaGTGGCCTTCATATGGTCCACACTGCCTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: HFLSFPPSGCHR*WPSYGPHCLVG
Trigger: CCCCACCAGGCAGTGTGGACCATATGAAGGCCACCATCTATGGCATCCTGAGGGAGGGAAGCTCAGAAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000416743.1
CDS CCA 72 bp TCTGTTTTCTCCTCCAGCTGCCGCTCCAGCCCAACTTaGGATGGCTCTAGCTTCTGCCGCTTCTTCACCTCT +
Preference number: 6 (lower is better)
Translates to: SVFSSSCRSSPT*DGSSFCRFFTS
Trigger: AGAGGTGAAGAAGCGGCAGAAGCTAGAGCCATCCCAAGTTGGGCTGGAGCGGCAGCTGGAGGAGAAAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000416743.1
CDS TCA 72 bp TGGGCAGGTCGGGGCCATGCTCTGGTGACGGCCCTTTaGCAGAAAGGCAAACCCCAGAATCTACTCTTCATT +
Preference number: 6 (lower is better)
Translates to: WAGRGHALVTAL*QKGKPQNLLFI
Trigger: AATGAAGAGTAGATTCTGGGGTTTGCCTTTCTGTCAAAGGGCCGTCACCAGAGCATGGCCCCGACCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS CCA 72 bp ACCTGGGTCTCCAGCCCATGTCGTAAATCTTCACCCTaGTCCAAGAGGCGCTTCATGTTCTGGAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: TWVSSPCRKSSP*SKRRFMFWSSL
Trigger: CAAGGAGCTCCAGAACATGAAGCGCCTCTTGGACCAGGGTGAAGATTTACGACATGGGCTGGAGACCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CAA 72 bp ATGGGCAGGTCGGGGCCATGCTCTGGTGACGGCCCTTaGACAGAAAGGCAAACCCCAGAATCTACTCTTCAT +
Preference number: 6 (lower is better)
Translates to: MGRSGPCSGDGP*TERQTPESTLH
Trigger: ATGAAGAGTAGATTCTGGGGTTTGCCTTTCTGTCAAAGGGCCGTCACCAGAGCATGGCCCCGACCTGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS GCA 72 bp CCACTGAGAGGACTCAGGTTCTGGCTCTGGGCTGGCTaGTTCGAAGTGCCCACATGGTTGTCATATTTTGTG +
Preference number: 6 (lower is better)
Translates to: PLRGLRFWLWAG*FEVPTWLSYFV
Trigger: CACAAAATATGACAACCATGTGGGCACTTCGAAGCAGCCAGCCCAGAGCCAGAACCTGAGTCCTCTCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS GCA 72 bp TCTCCAGCACTAGCTCGGGCCTGCTCTAATTCCCTCTaGAAGACCTCTATCTTCTCTCCAAGCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SPALARACSNSL*KTSIFSPSSSS
Trigger: GGAAGAGGAGCTTGGAGAGAAGATAGAGGTCTTGCAGAGGGAATTAGAGCAGGCCCGAGCTAGTGCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000464886.1
CDS CCA 72 bp CCCACATGGTTGTCATATTTTGTGCTAGAGGTCCAGTaGTTGGTGGACTGGCGCTCCCGTTCCTCAAAGGTG +
Preference number: 6 (lower is better)
Translates to: PTWLSYFVLEVQ*LVDWRSRSSKV
Trigger: CACCTTTGAGGAACGGGAGCGCCAGTCCACCAACCACTGGACCTCTAGCACAAAATATGACAACCATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS CCA 72 bp GCCTTGGAAGCCTCTTCACAGTCCTGTCGCAGTTGCTaGAGGGTCTTTTGTAGCTGGAGGTTCTGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: ALEASSQSCRSC*RVFCSWRFCSS
Trigger: GGAAGAACAGAACCTCCAGCTACAAAAGACCCTCCAGCAACTGCGACAGGACTGTGAAGAGGCTTCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CAA 72 bp TGGCTCTGGGCTGGCTGCTTCGAAGTGCCCACATGGTaGTCATATTTTGTGCTAGAGGTCCAGTGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: WLWAGCFEVPTW*SYFVLEVQWLV
Trigger: CACCAACCACTGGACCTCTAGCACAAAATATGACAACCATGTGGGCACTTCGAAGCAGCCAGCCCAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS CAA 72 bp GGGCTGTCGGTTTTGACCGCTAGTACAGAAAGAGGCTaGGAAGTCCCACCCTTTTTCCACAGGTCACACCTC +
Preference number: 6 (lower is better)
Translates to: GLSVLTASTERG*EVPPFFHRSHL
Trigger: GAGGTGTGACCTGTGGAAAAAGGGTGGGACTTCCAAGCCTCTTTCTGTACTAGCGGTCAAAACCGACAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS TCA 72 bp TCCAGTCGCTCAATTTCCTCTTCTGCTTCATCCACCTaGCGCTTCAAAGCCTTCACCCTCAGGCTTAGCTGG +
Preference number: 6 (lower is better)
Translates to: SSRSISSSASST*RFKAFTLRLSW
Trigger: CCAGCTAAGCCTGAGGGTGAAGGCTTTGAAGCGTCAGGTGGATGAAGCAGAAGAGGAAATTGAGCGACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS TCA 72 bp TGTCGAATTCCTCATCTGAGCTCAGCCCTTCGTTTTTaGGAGCTGACTCAGCAGCTGAGCGGGAAGCTTTGC +
Preference number: 6 (lower is better)
Translates to: CRIPHLSSALRF*ELTQQLSGKLC
Trigger: GCAAAGCTTCCCGCTCAGCTGCTGAGTCAGCTCTCAAAAACGAAGGGCTGAGCTCAGATGAGGAATTCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS TCA 72 bp GAGAGAGAAACCCAAGTACCTGGGCCAAGGCTGAGGTaGAGAGACTCAGAAACTGAGGTACTGGAGGCAGTA +
Preference number: 6 (lower is better)
Translates to: ERETQVPGPRLR*RDSETEVLEAV
Trigger: TACTGCCTCCAGTACCTCAGTTTCTGAGTCTCTTCACCTCAGCCTTGGCCCAGGTACTTGGGTTTCTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS GCA 72 bp CAGAGGTTTCACTTTCTGAGCTTCCCTCCCTCAGGATaGCATAGATGGTGGCCTTCATATGGTCCACACTGC +
Preference number: 6 (lower is better)
Translates to: QRFHFLSFPPSG*HRWWPSYGPHC
Trigger: GCAGTGTGGACCATATGAAGGCCACCATCTATGGCATCCTGAGGGAGGGAAGCTCAGAAAGTGAAACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000416743.1
CDS GCA 72 bp TCAACCTGGCGAGTATCTCCAGCACTAGCTCGGGCCTaGTCTAATTCCCTCTGCAAGACCTCTATCTTCTCT +
Preference number: 6 (lower is better)
Translates to: STWRVSPALARA*SNSLCKTSIFS
Trigger: AGAGAAGATAGAGGTCTTGCAGAGGGAATTAGAGCAGGCCCGAGCTAGTGCTGGAGATACTCGCCAGGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000464886.1
CDS CCA 72 bp AAAGCCACTGAGAGGACTCAGGTTCTGGCTCTGGGCTaGCTGCTTCGAAGTGCCCACATGGTTGTCATATTT +
Preference number: 6 (lower is better)
Translates to: KATERTQVLALG*LLRSAHMVVIF
Trigger: AAATATGACAACCATGTGGGCACTTCGAAGCAGCCAGCCCAGAGCCAGAACCTGAGTCCTCTCAGTGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS CCA 72 bp TCCTTCAGTAACACCTCCTTAGCAGGCTCAGGACCCTaGACATGTTTCAGCTTGTTCTGCAGCTCCATCACC +
Preference number: 6 (lower is better)
Translates to: SFSNTSLAGSGP*TCFSLFCSSIT
Trigger: GGTGATGGAGCTGCAGAACAAGCTGAAACATGTCCAGGGTCCTGAGCCTGCTAAGGAGGTGTTACTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CCA 72 bp ATCAGGAGAAAGTGTTCCCTAAAGATCAGGCCAGGCTaGCCATATCTGAGGTGGAAGATGGAGGGAGCCACA +
Preference number: 6 (lower is better)
Translates to: IRRKCSLKIRPG*PYLRWKMEGAT
Trigger: TGTGGCTCCCTCCATCTTCCACCTCAGATATGGCCAGCCTGGCCTGATCTTTAGGGAACACTTTCTCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467998.1
CDS CAA 72 bp ACATGGTTGTCATATTTTGTGCTAGAGGTCCAGTGGTaGGTGGACTGGCGCTCCCGTTCCTCAAAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: TWLSYFVLEVQW*VDWRSRSSKVS
Trigger: GGACACCTTTGAGGAACGGGAGCGCCAGTCCACCAACCACTGGACCTCTAGCACAAAATATGACAACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000427934.2
CDS CAA 72 bp CTGTCGAATTCCTCATCTGAGCTCAGCCCTTCGTTTTaGAGAGCTGACTCAGCAGCTGAGCGGGAAGCTTTG +
Preference number: 6 (lower is better)
Translates to: LSNSSSELSPSF*RADSAAEREAL
Trigger: CAAAGCTTCCCGCTCAGCTGCTGAGTCAGCTCTCAAAAACGAAGGGCTGAGCTCAGATGAGGAATTCGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS CAA 90 bp ATTCGCAGCTGCAGGAGTTCCTGCTTGGTGGCTCTAAGATCCTCCTaGTTCTTCTGGAACATACTCTGCCAATGCCCTGTCTCCTCTGAA +
Preference number: 6 (lower is better)
Translates to: IRSCRSSCLVALRSS*FFWNILCQCPVSSE
Trigger: TTCAGAGGAGACAGGGCATTGGCAGAGTATGTTCCAGAAGAACAAGGAGGATCTTAGAGCCACCAAGCAGGAACTCCTGCAGCTGCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000464886.1
CDS TCA 72 bp CCTTCACCCTCAGGCTTAGCTGGTCTTTCTGGTCATTaGCATGCTGCCGCTCGTCTTCAATCTGGATGGATA +
Preference number: 6 (lower is better)
Translates to: PSPSGLAGLSGH*HAAARLQSGWI
Trigger: TATCCATCCAGATTGAAGACGAGCGGCAGCATGTCAATGACCAGAAAGACCAGCTAAGCCTGAGGGTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS TCA 72 bp GAAAAGAGAGAGAAACCCAAGTACCTGGGCCAAGGCTaGGGTGAAGAGACTCAGAAACTGAGGTACTGGAGG +
Preference number: 6 (lower is better)
Translates to: EKREKPKYLGQG*GEETQKLRYWR
Trigger: CCTCCAGTACCTCAGTTTCTGAGTCTCTTCACCTCAGCCTTGGCCCAGGTACTTGGGTTTCTCTCTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS GCA 72 bp TTAGCCTTGGAAGCCTCTTCACAGTCCTGTCGCAGTTaGTGGAGGGTCTTTTGTAGCTGGAGGTTCTGTTCT +
Preference number: 6 (lower is better)
Translates to: LALEASSQSCRS*WRVFCSWRFCS
Trigger: AGAACAGAACCTCCAGCTACAAAAGACCCTCCAGCAACTGCGACAGGACTGTGAAGAGGCTTCCAAGGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271636.12
CDS CAA 72 bp TGCAGGAGTTCCTGCTTGGTGGCTCTAAGATCCTCCTaGTTCTTCTGGAACATACTCTGCCAATGCCCTGTC +
Preference number: 6 (lower is better)
Translates to: CRSSCLVALRSS*FFWNILCQCPV
Trigger: GACAGGGCATTGGCAGAGTATGTTCCAGAAGAACAAGGAGGATCTTAGAGCCACCAAGCAGGAACTCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271636.12
ENST00000464886.1
CDS CAA 90 bp AGACCAGGAGCCTCTCAAACTCCAGCATTAACAGACTTTTCTCTCTaGCACATCCCAGTAACCTTTTGGTACTTGCCTGGACCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: RPGASQTPALTDFSL*HIPVTFWYLPGPRA
Trigger: GGCTCTGGGTCCAGGCAAGTACCAAAAGGTTACTGGGATGTGCAAGAGAGAAAAGTCTGTTAATGCTGGAGTTTGAGAGGCTCCTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS TCA 72 bp GCCAAACAAAACTCATCAACTGTGGGCTGTCGGTTTTaGCCGCTAGTACAGAAAGAGGCTTGGAAGTCCCAC +
Preference number: 6 (lower is better)
Translates to: AKQNSSTVGCRF*PLVQKEAWKSH
Trigger: GTGGGACTTCCAAGCCTCTTTCTGTACTAGCGGTCAAAACCGACAGCCCACAGTTGATGAGTTTTGTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS GCA 72 bp ACCCTCAGGCTTAGCTGGTCTTTCTGGTCATTGACATaGTGCCGCTCGTCTTCAATCTGGATGGATAGTTCT +
Preference number: 6 (lower is better)
Translates to: TLRLSWSFWSLT*CRSSSIWMDSS
Trigger: AGAACTATCCATCCAGATTGAAGACGAGCGGCAGCATGTCAATGACCAGAAAGACCAGCTAAGCCTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS GCA 72 bp GGAAACCCACTGCTCAGCTCCAGCCAACTGTTGCCATaGAGACTCAGGACAAGACACTCAGTATTACCATAT +
Preference number: 6 (lower is better)
Translates to: GNPLLSSSQLLP*RLRTRHSVLPY
Trigger: ATATGGTAATACTGAGTGTCTTGTCCTGAGTCTGCATGGCAACAGTTGGCTGGAGCTGAGCAGTGGGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS GCA 72 bp CTGAAGAATACTGTTCACTCTAAAGGGGAAACCCACTaGTCAGCTCCAGCCAACTGTTGCCATGCAGACTCA +
Preference number: 6 (lower is better)
Translates to: LKNTVHSKGETH*SAPANCCHADS
Trigger: TGAGTCTGCATGGCAACAGTTGGCTGGAGCTGAGCAGTGGGTTTCCCCTTTAGAGTGAACAGTATTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS CAA 72 bp AGCCAAACAAAACTCATCAACTGTGGGCTGTCGGTTTaGACCGCTAGTACAGAAAGAGGCTTGGAAGTCCCA +
Preference number: 6 (lower is better)
Translates to: SQTKLINCGLSV*TASTERGLEVP
Trigger: TGGGACTTCCAAGCCTCTTTCTGTACTAGCGGTCAAAACCGACAGCCCACAGTTGATGAGTTTTGTTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS CAA 90 bp AAATACTGCAGCCAAACAAAACTCATCAACTGTGGGCTGTCGGTTTaGACCGCTAGTACAGAAAGAGGCTTGGAAGTCCCACCCTTTTTC +
Preference number: 6 (lower is better)
Translates to: KYCSQTKLINCGLSV*TASTERGLEVPPFF
Trigger: GAAAAAGGGTGGGACTTCCAAGCCTCTTTCTGTACTAGCGGTCAAAACCGACAGCCCACAGTTGATGAGTTTTGTTTGGCTGCAGTATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473377.5
CDS GCA 72 bp CTCAGGCTTAGCTGGTCTTTCTGGTCATTGACATGCTaGCGCTCGTCTTCAATCTGGATGGATAGTTCTTTA +
Preference number: 6 (lower is better)
Translates to: LRLSWSFWSLTC*RSSSIWMDSSL
Trigger: TAAAGAACTATCCATCCAGATTGAAGACGAGCGGCAGCATGTCAATGACCAGAAAGACCAGCTAAGCCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271636.12
ENST00000467998.1
ENST00000473377.5
CDS TCA 72 bp CGATTGGTAGACTGCAGAACTGTCTTCTCCCTAAGGTaGGGTAGAAGAATGTCTATGAGTGTCCCCATTTCT +
Preference number: 6 (lower is better)
Translates to: RLVDCRTVFSLR*GRRMSMSVPIS
Trigger: AGAAATGGGGACACTCATAGACATTCTTCTACCTCACCTTAGGGAGAAGACAGTTCTGCAGTCTACCAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467998.1