Pregenerated sensors for CGAS (Homo sapiens)
Ensembl gene IDs: ENSG00000164430Ensembl transcript IDs: ENST00000370315.4, ENST00000370318.5, ENST00000459924.1, ENST00000680833.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTATGCGGTCTCACCCTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATGCTGAGTTTATCTTTTaGTTCAGTGCGGATCACTTA | + |
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Preference number: 2 (lower is better) Translates to: VCGLTLNHDDLDELCSLNAEFIF*FSADHL Trigger: TAAGTGATCCGCACTGAAGCAAAAGATAAACTCAGC...ATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAGGGTGAGACCGCATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| 3UTR-3UTR CAA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGCCACAGACAAAGTCATaGTCTTCGTTTCTCGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: LNHDDLDELCSLNPLGCKPQTKS*SSFLEK Trigger: CTTTTCGAGAAACGAAGACAATGACTTTGTCTGTGG...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| 3UTR TCA 72 bp | TTAAAAACATTAACCAATGAGAGAGAAGATGCATTTTaGGCTGATGTATGCGGTCTCACCCTCAATCATGAT | + |
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Preference number: 3 (lower is better) Translates to: LKTLTNEREDAF*ADVCGLTLNHD Trigger: ATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCTCATTGGTTAATGTTTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGGTGTCCTGGGCGCGCTaGGGGGCCTTTTTGGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMVSWAR*GAFLAR Trigger: CCGCGCCAAAAAGGCCCCTCAGCGCGCCCAGGACAC...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGCAGCCGGAGACTCGGTaGGATCCATCGGGGCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMQPETR*DPSGRP Trigger: GGGGCGCCCCGATGGATCCCACCGAGTCTCCGGCTG...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGCCCGGGCGGAGGTCTTaGCTTCGTGGAGCAGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMPGRRS*LRGAAR Trigger: GCGCGCTGCTCCACGAAGCCAAGACCTCCGCCCGGG...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGCCCTCCGTACGAGAATaGGGGCCGAGACCGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMPSVRE*GPRPAG Trigger: GCCTGCCGGTCTCGGCCCCCATTCTCGTACGGAGGG...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGAAGCCTTGGGGGCAGTaGCTCCGGCCTCGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMKPWGQ*LRPRKL Trigger: GAGCTTCCGAGGCCGGAGCCACTGCCCCCAAGGCTT...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR GCA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGAGGCTCCAGCCCCTCTaGCCCAGGGGCGCTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNHDDLDELCSLNPLGCKRLQPL*PRGAGG Trigger: GCCACCAGCGCCCCTGGGGCAGAGGGGCTGGAGCCT...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGCTGCCCCAGGGGCGCTaGTGGCGTCAGACGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: LNHDDLDELCSLNPLGCKLPQGR*WRQTAA Trigger: CGCAGCCGTCTGACGCCACCAGCGCCCCTGGGGCAG...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGGGCAAGAACCAGCCCTaGAAAGAGCCGGCTCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMGKNQP*KEPAPE Trigger: CTCGGGAGCCGGCTCTTTCCAGGGCTGGTTCTTGCC...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR GCA 90 bp | GTATGCGGTCTCACCCTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATGCCCCTGGCATTCCGTaGGGAAGCCTTGGGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCGLTLNHDDLDELCSLNAPGIP*GSLGGS Trigger: ACTGCCCCCAAGGCTTCCGCACGGAATGCCAGGGGC...ATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAGGGTGAGACCGCATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | GTATGCGGTCTCACCCTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATGGGATCCCGACTTCCTaGCGGGGCCGAACTTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VCGLTLNHDDLDELCSLNGIPTS*RGRTFP Trigger: CGGGAAAGTTCGGCCCCGCCAGGAAGTCGGGATCCC...ATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAGGGTGAGACCGCATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGCCCCAGGGGCGCTGGTaGCGTCAGACGGCTGCGTGT | + |
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Preference number: 4 (lower is better) Translates to: LNHDDLDELCSLNPLGCKPQGRW*RQTAAC Trigger: ACACGCAGCCGTCTGACGCCACCAGCGCCCCTGGGG...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | CAAACTTTTCTACAGAGTATGTCATCCACAGACAAAGTCATTGTCTTCGTTTCTCAGCGCGCGCCCCTCTaGCGGCAAGAACCAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: QTFLQSMSSTDKVIVFVSQRAPL*RQEPAL Trigger: CAGGGCTGGTTCTTGCCGCCAGAGGGGCGCGCGCTG...AGAAACGAAGACAATGACTTTGTCTGTGGATGACATACTCTGTAGAAAAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGCGGAAGCTCTCTGCATaGCCTTTCCGTGCCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMRKLSA*PFRAKA Trigger: AGCCTTGGCACGGAAAGGCCATGCAGAGAGCTTCCG...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | CAAACTTTTCTACAGAGTATGTCATCCACAGACAAAGTCATTGTCTTCGTTTCTCCATCGGGGCGCCCCTaGCATTCCGTGCGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTFLQSMSSTDKVIVFVSPSGRP*HSVRKP Trigger: AGGCTTCCGCACGGAATGCCAGGGGCGCCCCGATGG...AGAAACGAAGACAATGACTTTGTCTGTGGATGACATACTCTGTAGAAAAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGACGGGCGGCCTCTCCTaGGTGTCCGGGGCGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNHDDLDELCSLNPLGCKTGGLS*VSGALF Trigger: AAAGAGCGCCCCGGACACCCAGGAGAGGCCGCCCGT...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | CAAACTTTTCTACAGAGTATGTCATCCACAGACAAAGTCATTGTCTTCGTTTCTGCAGCCCGACGCCTCTaGACGCGGAGTCGCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTFLQSMSSTDKVIVFVSAARRL*TRSRTS Trigger: TGAAGTGCGACTCCGCGTTCAGAGGCGTCGGGCTGC...AGAAACGAAGACAATGACTTTGTCTGTGGATGACATACTCTGTAGAAAAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR GCA 90 bp | GTATGCGGTCTCACCCTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATTGCATGGCCTTTCCGTaGCAAGGCTGCATGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VCGLTLNHDDLDELCSLNCMAFP*QGCMAG Trigger: GCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCA...ATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAGGGTGAGACCGCATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGGCTGAAAGCCAGTTTTaGATGCGCAGGCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMAESQF*MRRPSW Trigger: CCAAGAAGGCCTGCGCATTCAAAACTGGCTTTCAGC...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | GTATGCGGTCTCACCCTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATATGCGCAGGCCTTCTTaGGTGCTAGCAGGCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VCGLTLNHDDLDELCSLNMRRPS*VLAGQL Trigger: TAGCTGGCCTGCTAGCACCCAAGAAGGCCTGCGCAT...ATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAGGGTGAGACCGCATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | GTATGCGGTCTCACCCTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATAGTCGCACTTCAGTCTaGGCAGCAGGTGGTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: VCGLTLNHDDLDELCSLNSRTSV*AAGGPQ Trigger: TTGTGGACCACCTGCTGCTCAGACTGAAGTGCGACT...ATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAGGGTGAGACCGCATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR GCA 90 bp | GTATGCGGTCTCACCCTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATTTTCCGTGCCAAGGCTaGATGGCTGGCGCTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VCGLTLNHDDLDELCSLNFPCQG*MAGAFC Trigger: ACAGAAAGCGCCAGCCATGCAGCCTTGGCACGGAAA...ATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAGGGTGAGACCGCATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR GCA 90 bp | CAAACTTTTCTACAGAGTATGTCATCCACAGACAAAGTCATTGTCTTCGTTTCTGGGGCGCTCTTTTTCTaGCGGGATCCCGACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QTFLQSMSSTDKVIVFVSGALFF*RDPDFL Trigger: CAGGAAGTCGGGATCCCGGCAGAAAAAGAGCGCCCC...AGAAACGAAGACAATGACTTTGTCTGTGGATGACATACTCTGTAGAAAAGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGCGTGCCAAGGCTGCATaGCTGGCGCTTTCTGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LNHDDLDELCSLNPLGCKRAKAA*LALSVP Trigger: GGGAACAGAAAGCGCCAGCCATGCAGCCTTGGCACG...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR GCA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGGCCTCGGAAGCTCTCTaGATGGCCTTTCCGTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LNHDDLDELCSLNPLGCKASEAL*MAFPCQ Trigger: TTGGCACGGAAAGGCCATGCAGAGAGCTTCCGAGGC...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGCCAAGGCTGCATGGCTaGCGCTTTCTGTTCCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: LNHDDLDELCSLNPLGCKPRLHG*RFLFPE Trigger: TTCGGGGAACAGAAAGCGCCAGCCATGCAGCCTTGG...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGAGGCCAGCTACTTTTTaGTTCCAAAGCCAGGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMRPATF*FQSQGY Trigger: ATAACCCTGGCTTTGGAATCAAAAAGTAGCTGGCCT...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGAGAGAAGATGCATTTTaGGCTGATGTATGCGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMREDAF*ADVCGL Trigger: GAGACCGCATACATCAGCTCAAAATGCATCTTCTCT...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CCA 90 bp | CAAACTTTTCTACAGAGTATGTCATCCACAGACAAAGTCATTGTCTTCGTTTCTAGTCTGAGCAGCAGGTaGTCCACAACCCCTTTCACC | + |
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Preference number: 4 (lower is better) Translates to: QTFLQSMSSTDKVIVFVSSLSSR*STTPFT Trigger: GGTGAAAGGGGTTGTGGACCACCTGCTGCTCAGACT...AGAAACGAAGACAATGACTTTGTCTGTGGATGACATACTCTGTAGAAAAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR GCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGACCATTTCCTTCCTTTaGATGCTTGGGTACAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMTISFL*MLGYKV Trigger: TACCTTGTACCCAAGCATGCAAAGGAAGGAAATGGT...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | GTATGCGGTCTCACCCTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATAGATATCATCGCGGCTaGGCTTCAACTTCTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: VCGLTLNHDDLDELCSLNRYHRG*ASTSPK Trigger: TTTTGGAGAAGTTGAAGCTCAGCCGCGATGATATCT...ATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAGGGTGAGACCGCATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR GCA 90 bp | CAAACTTTTCTACAGAGTATGTCATCCACAGACAAAGTCATTGTCTTCGTTTCTAAAGCCAGTTTTGAATaGGCAGGCCTTCTTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QTFLQSMSSTDKVIVFVSKASFE*AGLLGC Trigger: GCACCCAAGAAGGCCTGCGCATTCAAAACTGGCTTT...AGAAACGAAGACAATGACTTTGTCTGTGGATGACATACTCTGTAGAAAAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR GCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGGCTGAGTTTATCTTTTaGTTCAGTGCGGATCACTTA | + |
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Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMAEFIF*FSADHL Trigger: TAAGTGATCCGCACTGAAGCAAAAGATAAACTCAGC...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | CAAACTTTTCTACAGAGTATGTCATCCACAGACAAAGTCATTGTCTTCGTTTCTAGATGCATTTTGAGCTaGTGTATGCGGTCTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: QTFLQSMSSTDKVIVFVSRCILS*CMRSHP Trigger: AGGGTGAGACCGCATACATCAGCTCAAAATGCATCT...AGAAACGAAGACAATGACTTTGTCTGTGGATGACATACTCTGTAGAAAAGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR GCA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGATCAAATTCATTAGGTaGAGAAATCTTCACGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: REKMHFELMYAVSPSIMMIKFIR*RNLHVL Trigger: GAGCACGTGAAGATTTCTGCACCTAATGAATTTGAT...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGATTTCCTTTTCGATGTaGGAGAAGGATAGCCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LNHDDLDELCSLNPLGCKISFSM*EKDSRH Trigger: ATGGCGGCTATCCTTCTCTCACATCGAAAAGGAAAT...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | CAAACTTTTCTACAGAGTATGTCATCCACAGACAAAGTCATTGTCTTCGTTTCTCTTCCTAACTTTTGCTaGAAGCCAGTTTTGAATGCG | + |
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Preference number: 4 (lower is better) Translates to: QTFLQSMSSTDKVIVFVSLPNFC*KPVLNA Trigger: CGCATTCAAAACTGGCTTTCAGCAAAAGTTAGGAAG...AGAAACGAAGACAATGACTTTGTCTGTGGATGACATACTCTGTAGAAAAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGGAATATTCTTCTAGTTaGATTCTGGGGACTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LNHDDLDELCSLNPLGCKEYSSS*ILGTSS Trigger: ACTGGAAGTCCCCAGAATTCAACTAGAAGAATATTC...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR GCA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGGGCTTTAGTCGTAGTTaGTTCCTAACTTTTGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LNHDDLDELCSLNPLGCKGFSRS*FLTFAE Trigger: TTCAGCAAAAGTTAGGAAGCAACTACGACTAAAGCC...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| 3UTR CAA 72 bp | CTTTTCTACAGAGTATGTCATCCACAGACAAAGTCATaGTCTTCGTTTCTCGAAAAGCTGTGTAGGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: LFYRVCHPQTKS*SSFLEKLCRYF Trigger: AAAATACCTACACAGCTTTTCGAGAAACGAAGACAATGACTTTGTCTGTGGATGACATACTCTGTAGAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| 3UTR CAA 72 bp | ACCCTCAATCATGATGACCTTGATGAACTATGTTCTTaGAATCCTTTAGGCTGTAAGTTCAGTGAAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: TLNHDDLDELCS*NPLGCKFSEAK Trigger: TTTTGCTTCACTGAACTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR TCA 90 bp | CAAACTTTTCTACAGAGTATGTCATCCACAGACAAAGTCATTGTCTTCGTTTCTTCACCTTCTAAAAACTaGCTCAGAGGATTTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QTFLQSMSSTDKVIVFVSSPSKN*LRGFSF Trigger: GAAAGAAAATCCTCTGAGTCAGTTTTTAGAAGGTGA...AGAAACGAAGACAATGACTTTGTCTGTGGATGACATACTCTGTAGAAAAGTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS GCA 90 bp | CCTGGAAAGAGCCGGCTCCCGAGCCGCAGGAGGCTCCAGCCCCTCTaGCCCAGGGGCGCTGGTGGCGTCAGACGGCTGCGTGTCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: PGKSRLPSRRRLQPL*PRGAGGVRRLRVLG Trigger: GCCCAGGACACGCAGCCGTCTGACGCCACCAGCGCCCCTGGGGCAGAGGGGCTGGAGCCTCCTGCGGCTCGGGAGCCGGCTCTTTCCAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000680833.1 |
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| CDS CCA 90 bp | GGCCCGGGCGGAGGTCTTGGCTTCGTGGAGCAGCGCGCGCCCCTCTaGCGGCAAGAACCAGCCCTGGAAAGAGCCGGCTCCCGAGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: GPGGGLGFVEQRAPL*RQEPALERAGSRAA Trigger: TGCGGCTCGGGAGCCGGCTCTTTCCAGGGCTGGTTCTTGCCGCCAGAGGGGCGCGCGCTGCTCCACGAAGCCAAGACCTCCGCCCGGGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000680833.1 |
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| CDS CCA 90 bp | CATCCCTCCGTACGAGAATGGGGGCCGAGACCGGCAGGCCGGGGCTaGGCACGTCCCAGGGCCCGGGCGGAGGTCTTGGCTTCGTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: HPSVREWGPRPAGRG*ARPRARAEVLASWS Trigger: GCTCCACGAAGCCAAGACCTCCGCCCGGGCCCTGGGACGTGCCCAGCCCCGGCCTGCCGGTCTCGGCCCCCATTCTCGTACGGAGGGATG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000680833.1 |
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| CDS CCA 90 bp | GCTTCGTGGAGCAGCGCGCGCCCCTCTGGCGGCAAGAACCAGCCCTaGAAAGAGCCGGCTCCCGAGCCGCAGGAGGCTCCAGCCCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ASWSSARPSGGKNQP*KEPAPEPQEAPAPL Trigger: CAGAGGGGCTGGAGCCTCCTGCGGCTCGGGAGCCGGCTCTTTCCAGGGCTGGTTCTTGCCGCCAGAGGGGCGCGCGCTGCTCCACGAAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000680833.1 |
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| CDS GCA 90 bp | CGTGCGGAAGCCTTGGGGGCAGTGGCTCCGGCCTCGGAAGCTCTCTaGATGGCCTTTCCGTGCCAAGGCTGCATGGCTGGCGCTTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: RAEALGAVAPASEAL*MAFPCQGCMAGAFC Trigger: ACAGAAAGCGCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGAGCTTCCGAGGCCGGAGCCACTGCCCCCAAGGCTTCCGCACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS CCA 90 bp | CGGAAGCCTTGGGGGCAGTGGCTCCGGCCTCGGAAGCTCTCTGCATaGCCTTTCCGTGCCAAGGCTGCATGGCTGGCGCTTTCTGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: RKPWGQWLRPRKLSA*PFRAKAAWLALSVP Trigger: GGGAACAGAAAGCGCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGAGCTTCCGAGGCCGGAGCCACTGCCCCCAAGGCTTCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS GCA 90 bp | GGGGCAGTGGCTCCGGCCTCGGAAGCTCTCTGCATGGCCTTTCCGTaGCAAGGCTGCATGGCTGGCGCTTTCTGTTCCCCGAAAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: GAVAPASEALCMAFP*QGCMAGAFCSPKEE Trigger: TTCTTCTTTCGGGGAACAGAAAGCGCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGAGCTTCCGAGGCCGGAGCCACTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS CCA 90 bp | CCGACGCCTCTGAACGCGGAGTCGCACTTCAGTCTGAGCAGCAGGTaGTCCACAACCCCTTTCACCATCCCCGCCGCCGTGGAGATATCA | + |
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Preference number: 5 (lower is better) Translates to: PTPLNAESHFSLSSR*STTPFTIPAAVEIS Trigger: TGATATCTCCACGGCGGCGGGGATGGTGAAAGGGGTTGTGGACCACCTGCTGCTCAGACTGAAGTGCGACTCCGCGTTCAGAGGCGTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000680833.1 |
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| CDS GCA 90 bp | GCTCCGGCCTCGGAAGCTCTCTGCATGGCCTTTCCGTGCCAAGGCTaGATGGCTGGCGCTTTCTGTTCCCCGAAAGAAGAATCCGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: APASEALCMAFPCQG*MAGAFCSPKEESVS Trigger: TGAAACGGATTCTTCTTTCGGGGAACAGAAAGCGCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGAGCTTCCGAGGCCGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS CCA 90 bp | CGGCCTCGGAAGCTCTCTGCATGGCCTTTCCGTGCCAAGGCTGCATaGCTGGCGCTTTCTGTTCCCCGAAAGAAGAATCCGTTTCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: RPRKLSAWPFRAKAA*LALSVPRKKNPFQE Trigger: TTCCTGAAACGGATTCTTCTTTCGGGGAACAGAAAGCGCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGAGCTTCCGAGGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS CCA 90 bp | CTCGGAAGCTCTCTGCATGGCCTTTCCGTGCCAAGGCTGCATGGCTaGCGCTTTCTGTTCCCCGAAAGAAGAATCCGTTTCAGGAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: LGSSLHGLSVPRLHG*RFLFPERRIRFRKR Trigger: CCTTTTCCTGAAACGGATTCTTCTTTCGGGGAACAGAAAGCGCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGAGCTTCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGTTCCGTGCGGAAGCCTaGGGGGCAGTGGCTCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: REKMHFELMYAVSPSIMMFRAEA*GAVAPA Trigger: GGCCGGAGCCACTGCCCCCAAGGCTTCCGCACGGAA...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CAA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGGCCCGGGCGGAGGTCTaGGCTTCGTGGAGCAGCGCG | + |
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Preference number: 5 (lower is better) Translates to: LNHDDLDELCSLNPLGCKARAEV*ASWSSA Trigger: CGCGCTGCTCCACGAAGCCAAGACCTCCGCCCGGGC...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS GCA 90 bp | GAAGAAAGTATGTCACGCAGTTATCAAAGCAGAGGCCCAGGTCTTTaGGGTCCCACTGACTGTCTTGAGGGTTCTGGGTACATACGTGAA | + |
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Preference number: 5 (lower is better) Translates to: EESMSRSYQSRGPGL*GPTDCLEGSGYIRE Trigger: TTCACGTATGTACCCAGAACCCTCAAGACAGTCAGTGGGACCGCAAAGACCTGGGCCTCTGCTTTGATAACTGCGTGACATACTTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370315.4 |
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| CDS TCA 90 bp | GGCTTTAGTCGTAGTTGCTTCCTAACTTTTGCTGAAAGCCAGTTTTaGATGCGCAGGCCTTCTTGGGTGCTAGCAGGCCAGCTACTTTTT | + |
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Preference number: 5 (lower is better) Translates to: GFSRSCFLTFAESQF*MRRPSWVLAGQLLF Trigger: AAAAAGTAGCTGGCCTGCTAGCACCCAAGAAGGCCTGCGCATTCAAAACTGGCTTTCAGCAAAAGTTAGGAAGCAACTACGACTAAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000459924.1 ENST00000680833.1 |
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| CDS-3UTR CAA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGAATGCGCAGGCCTTCTaGGGTGCTAGCAGGCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LNHDDLDELCSLNPLGCKNAQAF*GASRPA Trigger: AGCTGGCCTGCTAGCACCCAAGAAGGCCTGCGCATT...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGAAGATGCATTTTGAGCTGATGTATGCGGTCTCACCCTCAATCATGATGCCACAGACAAAGTCATaGTCTTCGTTTCTCGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: REKMHFELMYAVSPSIMMPQTKS*SSFLEK Trigger: CTTTTCGAGAAACGAAGACAATGACTTTGTCTGTGG...CATCATGATTGAGGGTGAGACCGCATACATCAGCTCAAAATGCATCTTCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CAA 90 bp | GTATGCGGTCTCACCCTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATAACCATTTCCTTCCTTaGCATGCTTGGGTACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: VCGLTLNHDDLDELCSLNNHFLP*HAWVQG Trigger: ACCTTGTACCCAAGCATGCAAAGGAAGGAAATGGTT...ATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAGGGTGAGACCGCATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CAA 90 bp | CAAACTTTTCTACAGAGTATGTCATCCACAGACAAAGTCATTGTCTTCGTTTCTCAGGCCAGCTACTTTTaGATTCCAAAGCCAGGGTTA | + |
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Preference number: 5 (lower is better) Translates to: QTFLQSMSSTDKVIVFVSQASYF*IPKPGL Trigger: TAACCCTGGCTTTGGAATCAAAAAGTAGCTGGCCTG...AGAAACGAAGACAATGACTTTGTCTGTGGATGACATACTCTGTAGAAAAGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CAA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGCCGCCATGTTTCTTCTaGGAAACCATTTCCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: LNHDDLDELCSLNPLGCKPPCFF*ETISFL Trigger: AAGGAAGGAAATGGTTTCCAAGAAGAAACATGGCGG...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CAA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGGATGAACTATGTTCTTaGAATCCTTTAGGCTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: LNHDDLDELCSLNPLGCKDELCS*NPLGCK Trigger: CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATC...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS-3UTR CAA 90 bp | CTCAATCATGATGACCTTGATGAACTATGTTCTTTGAATCCTTTAGGCTGTAAGAGGACGTCTGCCATTTaGCTTAGCAGTTTATTAAAA | + |
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Preference number: 5 (lower is better) Translates to: LNHDDLDELCSLNPLGCKRTSAI*LSSLLK Trigger: TTTTAATAAACTGCTAAGCAAAATGGCAGACGTCCT...CTTACAGCCTAAAGGATTCAAAGAACATAGTTCATCAAGGTCATCATGATTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370318.5 |
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| CDS CCA 72 bp | GGAGGTCTTGGCTTCGTGGAGCAGCGCGCGCCCCTCTaGCGGCAAGAACCAGCCCTGGAAAGAGCCGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GGLGFVEQRAPL*RQEPALERAGS Trigger: GGAGCCGGCTCTTTCCAGGGCTGGTTCTTGCCGCCAGAGGGGCGCGCGCTGCTCCACGAAGCCAAGACCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000680833.1 |
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| CDS GCA 72 bp | GCCTTGGGGGCAGTGGCTCCGGCCTCGGAAGCTCTCTaGATGGCCTTTCCGTGCCAAGGCTGCATGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: ALGAVAPASEAL*MAFPCQGCMAG Trigger: GCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGAGCTTCCGAGGCCGGAGCCACTGCCCCCAAGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS CCA 72 bp | CGCCCCTGGCATTCCGTGCGGAAGCCTTGGGGGCAGTaGCTCCGGCCTCGGAAGCTCTCTGCATGGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RPWHSVRKPWGQ*LRPRKLSAWPF Trigger: GAAAGGCCATGCAGAGAGCTTCCGAGGCCGGAGCCACTGCCCCCAAGGCTTCCGCACGGAATGCCAGGGGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000680833.1 |
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| CDS CCA 72 bp | TGGGGGCAGTGGCTCCGGCCTCGGAAGCTCTCTGCATaGCCTTTCCGTGCCAAGGCTGCATGGCTGGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: WGQWLRPRKLSA*PFRAKAAWLAL Trigger: AAGCGCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGAGCTTCCGAGGCCGGAGCCACTGCCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS GCA 72 bp | GCTCCGGCCTCGGAAGCTCTCTGCATGGCCTTTCCGTaGCAAGGCTGCATGGCTGGCGCTTTCTGTTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: APASEALCMAFP*QGCMAGAFCSP Trigger: CGGGGAACAGAAAGCGCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGAGCTTCCGAGGCCGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS CCA 72 bp | CTGAACGCGGAGTCGCACTTCAGTCTGAGCAGCAGGTaGTCCACAACCCCTTTCACCATCCCCGCCGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: LNAESHFSLSSR*STTPFTIPAAV Trigger: CACGGCGGCGGGGATGGTGAAAGGGGTTGTGGACCACCTGCTGCTCAGACTGAAGTGCGACTCCGCGTTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000680833.1 |
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| CDS TCA 72 bp | TCACCATCCCCGCCGCCGTGGAGATATCATCGCGGCTaGGCTTCAACTTCTCCAAAACCGCCCGGAGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: SPSPPPWRYHRG*ASTSPKPPGAS Trigger: CGAAGCTCCGGGCGGTTTTGGAGAAGTTGAAGCTCAGCCGCGATGATATCTCCACGGCGGCGGGGATGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000680833.1 |
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| CDS GCA 72 bp | TCGGAAGCTCTCTGCATGGCCTTTCCGTGCCAAGGCTaGATGGCTGGCGCTTTCTGTTCCCCGAAAGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SEALCMAFPCQG*MAGAFCSPKEE Trigger: TTCTTCTTTCGGGGAACAGAAAGCGCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGAGCTTCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS CCA 72 bp | AAGCTCTCTGCATGGCCTTTCCGTGCCAAGGCTGCATaGCTGGCGCTTTCTGTTCCCCGAAAGAAGAATCCG | + |
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Preference number: 6 (lower is better) Translates to: KLSAWPFRAKAA*LALSVPRKKNP Trigger: CGGATTCTTCTTTCGGGGAACAGAAAGCGCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS CCA 72 bp | TCTCTGCATGGCCTTTCCGTGCCAAGGCTGCATGGCTaGCGCTTTCTGTTCCCCGAAAGAAGAATCCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SLHGLSVPRLHG*RFLFPERRIRF Trigger: GAAACGGATTCTTCTTTCGGGGAACAGAAAGCGCCAGCCATGCAGCCTTGGCACGGAAAGGCCATGCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370315.4 ENST00000370318.5 |
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| CDS CAA 72 bp | GCAGAGGCCCAGGTCTTTGCGGTCCCACTGACTGTCTaGAGGGTTCTGGGTACATACGTGAAAGAAGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: AEAQVFAVPLTV*RVLGTYVKEGS Trigger: ACTGCCTTCTTTCACGTATGTACCCAGAACCCTCAAGACAGTCAGTGGGACCGCAAAGACCTGGGCCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370315.4 |
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| CDS GCA 72 bp | ATGTCACGCAGTTATCAAAGCAGAGGCCCAGGTCTTTaGGGTCCCACTGACTGTCTTGAGGGTTCTGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: MSRSYQSRGPGL*GPTDCLEGSGY Trigger: GTACCCAGAACCCTCAAGACAGTCAGTGGGACCGCAAAGACCTGGGCCTCTGCTTTGATAACTGCGTGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370315.4 |
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| CDS TCA 72 bp | CGTAGTTGCTTCCTAACTTTTGCTGAAAGCCAGTTTTaGATGCGCAGGCCTTCTTGGGTGCTAGCAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RSCFLTFAESQF*MRRPSWVLAGQ Trigger: CTGGCCTGCTAGCACCCAAGAAGGCCTGCGCATTCAAAACTGGCTTTCAGCAAAAGTTAGGAAGCAACTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000459924.1 ENST00000680833.1 |
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| CDS CAA 90 bp | GTTATCAAAGCAGAGGCCCAGGTCTTTGCGGTCCCACTGACTGTCTaGAGGGTTCTGGGTACATACGTGAAAGAAGGCAGTTTTCACATG | + |
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Preference number: 6 (lower is better) Translates to: VIKAEAQVFAVPLTV*RVLGTYVKEGSFHM Trigger: CATGTGAAAACTGCCTTCTTTCACGTATGTACCCAGAACCCTCAAGACAGTCAGTGGGACCGCAAAGACCTGGGCCTCTGCTTTGATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370315.4 |
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| CDS TCA 72 bp | GTAGAAGGAGCCTCAGGATTCAGAACCAGGGCAGTCTaGCTCCAAGGCCAATACTGCTTTTCTTTACCGAAA | + |
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Preference number: 6 (lower is better) Translates to: VEGASGFRTRAV*LQGQYCFSLPK Trigger: TTTCGGTAAAGAAAAGCAGTATTGGCCTTGGAGTCAGACTGCCCTGGTTCTGAATCCTGAGGCTCCTTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459924.1 |
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| CDS CAA 72 bp | GCCGCCATGTTTCTTCTTGGAAACCATTTCCTTCCTTaGCATGCTTGGGTACAAGGTAAAATGGCTTTAGTC | + |
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Preference number: 6 (lower is better) Translates to: AAMFLLGNHFLP*HAWVQGKMALV Trigger: GACTAAAGCCATTTTACCTTGTACCCAAGCATGCAAAGGAAGGAAATGGTTTCCAAGAAGAAACATGGCGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000370315.4 ENST00000370318.5 ENST00000680833.1 |
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