Pregenerated sensors for CGA (Homo sapiens)
Ensembl gene IDs: ENSG00000135346Ensembl transcript IDs: ENST00000369582.6, ENST00000610310.3, ENST00000625577.1, ENST00000627148.3, ENST00000627552.1, ENST00000630630.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTaGAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: DKEEGSKAAVYP*SVSKWYGKEKE Trigger: CTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| 3UTR TCA 72 bp | TGCCCCTTGTCACCTCTACCCCTATTCTCCTCATTCTaGATAAATCCAGTCTATACCCACAAGACAATTGAC | + |
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Preference number: 3 (lower is better) Translates to: CPLSPLPLFSSF*INPVYTHKTID Trigger: GTCAATTGTCTTGTGGGTATAGACTGGATTTATTCAGAATGAGGAGAATAGGGGTAGAGGTGACAAGGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR TCA 90 bp | TATTCCCCACCTGTACAAATGCTCGACAGAGGCTGGGTCATTAGACACCTTTGGCAGCAGCCCATGCACTaGAGTATTGGGGCACCCGGC | + |
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Preference number: 4 (lower is better) Translates to: YSPPVQMLDRGWVIRHLWQQPMH*SIGAPG Trigger: GCCGGGTGCCCCAATACTTCAGTGCATGGGCTGCTG...CCAAAGGTGTCTAATGACCCAGCCTCTGTCGAGCATTTGTACAGGTGGGGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR TCA 90 bp | TGTACTTTCTCCCAACCTGCCCCTTGTCACCTCTACCCCTATTCTCCTCATTCTTGTGTTCAGGGCGGTTaGCTGTGGATCCGAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: CTFSQPAPCHLYPYSPHSCVQGG*LWIRRG Trigger: CCCTCTTCGGATCCACAGTCAACCGCCCTGAACACA...AGAATGAGGAGAATAGGGGTAGAGGTGACAAGGGGCAGGTTGGGAGAAAGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR TCA 90 bp | GCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAACAGCAGCCCATGCACTaGAGTATTGGGGCACCCGGC | + |
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Preference number: 4 (lower is better) Translates to: AVKLQYILEACQSGMVRKQQPMH*SIGAPG Trigger: GCCGGGTGCCCCAATACTTCAGTGCATGGGCTGCTG...TTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | GAAATGTATTCCCCACCTGTACAAATGCTCGACAGAGGCTGGGTCATTAGACACATTGGGGCACCCGGCTaGGAGAAGAATGGGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EMYSPPVQMLDRGWVIRHIGAPG*EKNGFS Trigger: GGAAAACCCATTCTTCTCCCAGCCGGGTGCCCCAAT...GTGTCTAATGACCCAGCCTCTGTCGAGCATTTGTACAGGTGGGGAATACATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR TCA 90 bp | AGGATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTTGTGTTCAGGGCGGTTaGCTGTGGATCCGAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RIRRKAVKLQYILEACQSCVQGG*LWIRRG Trigger: CCCTCTTCGGATCCACAGTCAACCGCCCTGAACACA...ACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627148.3 |
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| CDS-3UTR TCA 90 bp | TGTATTCCCCACCTGTACAAATGCTCGACAGAGGCTGGGTCATTAGACACCTTTACAGCAAGTGGACTCTaGGGTGACGTTCTTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CIPHLYKCSTEAGSLDTFTASGL*GDVLLD Trigger: GTCCAAAAGAACGTCACCTCAGAGTCCACTTGCTGT...AAAGGTGTCTAATGACCCAGCCTCTGTCGAGCATTTGTACAGGTGGGGAATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR CCA 90 bp | AGGATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTATTGGGGCACCCGGCTaGGAGAAGAATGGGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RIRRKAVKLQYILEACQSIGAPG*EKNGFS Trigger: GGAAAACCCATTCTTCTCCCAGCCGGGTGCCCCAAT...ACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | ATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTCATGCACTGAAGTATTaGGGCACCCGGCTGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: IRRKAVKLQYILEACQSGHALKY*GTRLGE Trigger: TTCTCCCAGCCGGGTGCCCCAATACTTCAGTGCATG...ACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | CCTTTGGCATTAAATTCCATGGGTGGGCTCTATGAACATTTCTCTGATTGGGCTCATGCACTGAAGTATTaGGGCACCCGGCTGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: PLALNSMGGLYEHFSDWAHALKY*GTRLGE Trigger: TTCTCCCAGCCGGGTGCCCCAATACTTCAGTGCATG...AGCCCAATCAGAGAAATGTTCATAGAGCCCACCCATGGAATTTAATGCCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR CCA 90 bp | GTACTTTCTCCCAACCTGCCCCTTGTCACCTCTACCCCTATTCTCCTCATTCTGGAGGTGACGTTCTTTTaGACCAACATCGTCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: VLSPNLPLVTSTPILLILEVTFF*TNIVFL Trigger: CAAGAAGACGATGTTGGTCCAAAAGAACGTCACCTC...CAGAATGAGGAGAATAGGGGTAGAGGTGACAAGGGGCAGGTTGGGAGAAAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR CCA 90 bp | TGTATTCCCCACCTGTACAAATGCTCGACAGAGGCTGGGTCATTAGACACCTTTACATCAGGAGCGGAATaGAGAACATGCAGAAACACC | + |
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Preference number: 4 (lower is better) Translates to: CIPHLYKCSTEAGSLDTFTSGAE*RTCRNT Trigger: GGTGTTTCTGCATGTTCTCCATTCCGCTCCTGATGT...AAAGGTGTCTAATGACCCAGCCTCTGTCGAGCATTTGTACAGGTGGGGAATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR CCA 90 bp | AAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAATTGGGGCACCCGGCTaGGAGAAGAATGGGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: KLQYILEACQSGMVRKRRIGAPG*EKNGFS Trigger: GGAAAACCCATTCTTCTCCCAGCCGGGTGCCCCAAT...TCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | AAATGTATTCCCCACCTGTACAAATGCTCGACAGAGGCTGGGTCATTAGACACCCCAACATCGTCTTCTTaGACCTTAGTGGAGTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: KCIPHLYKCSTEAGSLDTPTSSS*TLVEWD Trigger: ATCCCACTCCACTAAGGTCCAAGAAGACGATGTTGG...GGTGTCTAATGACCCAGCCTCTGTCGAGCATTTGTACAGGTGGGGAATACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR CCA 90 bp | GCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAACAGTGGCACGCCGTGTaGTTCTCCACTTTGAAACCC | + |
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Preference number: 4 (lower is better) Translates to: AVKLQYILEACQSGMVRKQWHAV*FSTLKP Trigger: GGGTTTCAAAGTGGAGAACCACACGGCGTGCCACTG...TTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR TCA 90 bp | ATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTACAGCAAGTGGACTCTaGGGTGACGTTCTTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IRRKAVKLQYILEACQSGTASGL*GDVLLD Trigger: GTCCAAAAGAACGTCACCTCAGAGTCCACTTGCTGT...ACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR TCA 90 bp | AAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGACAGCAAGTGGACTCTaGGGTGACGTTCTTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KAVKLQYILEACQSGMVRTASGL*GDVLLD Trigger: GTCCAAAAGAACGTCACCTCAGAGTCCACTTGCTGT...CCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR TCA 90 bp | TGTATTCCCCACCTGTACAAATGCTCGACAGAGGCTGGGTCATTAGACACCTTTAGCTTCTGGGGATCTTaGGGTTCTTACCCTGTTATA | + |
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Preference number: 4 (lower is better) Translates to: CIPHLYKCSTEAGSLDTFSFWGS*GSYPVI Trigger: TATAACAGGGTAAGAACCTCAAGATCCCCAGAAGCT...AAAGGTGTCTAATGACCCAGCCTCTGTCGAGCATTTGTACAGGTGGGGAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR CCA 90 bp | ATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTGGGCAATCACAAATTTaGTCACGCACCCTGCACATC | + |
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Preference number: 4 (lower is better) Translates to: IRRKAVKLQYILEACQSGGQSQI*SRTLHI Trigger: GATGTGCAGGGTGCGTGACCAAATTTGTGATTGCCC...ACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369582.6 |
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| CDS-3UTR TCA 90 bp | AGGATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTCCATGGCGCTCCCTATaGTCACAGCCAAATTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: RIRRKAVKLQYILEACQSPWRSL*SQPNFT Trigger: TGTAAAATTTGGCTGTGATCATAGGGAGCGCCATGG...ACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369582.6 |
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| CDS-3UTR TCA 90 bp | AGGATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTAAGTGGACTCTGAGGTaGCGTTCTTTTGGACCAACA | + |
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Preference number: 4 (lower is better) Translates to: RIRRKAVKLQYILEACQSKWTLR*RSFGPT Trigger: TGTTGGTCCAAAAGAACGTCACCTCAGAGTCCACTT...ACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR TCA 90 bp | AGCACAAGTAAGCTGTACTTTCTCCCAACCTGCCCCTTGTCACCTCTACCCCTATCTTACCCTGTTATATaGTTTAGCTACACAGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: STSKLYFLPTCPLSPLPLSYPVI*FSYTAS Trigger: ACTTGCTGTGTAGCTAAATCATATAACAGGGTAAGA...TAGGGGTAGAGGTGACAAGGGGCAGGTTGGGAGAAAGTACAGCTTACTTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR GCA 90 bp | AGGATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGCGGAATGGAGAACATaGAGAAACACCGACAATGTG | + |
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Preference number: 4 (lower is better) Translates to: RIRRKAVKLQYILEACQSAEWRT*RNTDNV Trigger: CACATTGTCGGTGTTTCTGCATGTTCTCCATTCCGC...ACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | AAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGACATCAGGAGCGGAATaGAGAACATGCAGAAACACC | + |
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Preference number: 4 (lower is better) Translates to: KAVKLQYILEACQSGMVRTSGAE*RTCRNT Trigger: GGTGTTTCTGCATGTTCTCCATTCCGCTCCTGATGT...CCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | AGGATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTACATCAGGAGCGGAATaGAGAACATGCAGAAACACC | + |
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Preference number: 4 (lower is better) Translates to: RIRRKAVKLQYILEACQSTSGAE*RTCRNT Trigger: GGTGTTTCTGCATGTTCTCCATTCCGCTCCTGATGT...ACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | ATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTCCAACATCGTCTTCTTaGACCTTAGTGGAGTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: IRRKAVKLQYILEACQSGPTSSS*TLVEWD Trigger: ATCCCACTCCACTAAGGTCCAAGAAGACGATGTTGG...ACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR TCA 90 bp | AGGATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGCTGCAGTATATCCTTaGAGCGTGTCAAAGTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: RIRRKAVKLQYILEACQSAAVYP*SVSKWY Trigger: ATACCACTTTGACACGCTTCAAGGATATACTGCAGC...ACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR GCA 90 bp | TATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTATCTTTTGGTCACGCACCCTaGACATCAGGAGCGGAATGG | + |
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Preference number: 4 (lower is better) Translates to: YILEACQSGMVRKRRVLSFGHAP*TSGAEW Trigger: CCATTCCGCTCCTGATGTGCAGGGTGCGTGACCAAA...AGATAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369582.6 |
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| CDS-3UTR GCA 90 bp | AAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGATAATAACAAGTACTaGAGTGGCACGCCGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: KLQYILEACQSGMVRKRRDNNKY*SGTPCG Trigger: ACCACACGGCGTGCCACTGCAGTACTTGTTATTATC...TCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | TATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTATCTCATGCACTGAAGTATTaGGGCACCCGGCTGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: YILEACQSGMVRKRRVLSHALKY*GTRLGE Trigger: TTCTCCCAGCCGGGTGCCCCAATACTTCAGTGCATG...AGATAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | TATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTATCTCAGTGGCACGCCGTGTaGTTCTCCACTTTGAAACCC | + |
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Preference number: 4 (lower is better) Translates to: YILEACQSGMVRKRRVLSQWHAV*FSTLKP Trigger: GGGTTTCAAAGTGGAGAACCACACGGCGTGCCACTG...AGATAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | GCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAATTCTGTAGTAATCCATaGCGCTCCTTTCTCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AVKLQYILEACQSGMVRKFCSNP*RSFLWA Trigger: AGCCCAGAGAAAGGAGCGCCATGGATTACTACAGAA...TTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627148.3 |
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| CDS-3UTR GCA 90 bp | GTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGGGTTTTCCTGTAGCGTaGATTCTGGGCAATCACAAA | + |
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Preference number: 4 (lower is better) Translates to: VKLQYILEACQSGMVRKRGFPVA*ILGNHK Trigger: TTTGTGATTGCCCAGAATGCACGCTACAGGAAAACC...CCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369582.6 |
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| CDS-3UTR GCA 90 bp | GAAATGTATTCCCCACCTGTACAAATGCTCGACAGAGGCTGGGTCATTAGACACGATGCATACTACATTTaGACAGTCTCCTTTTTAGGA | + |
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Preference number: 4 (lower is better) Translates to: EMYSPPVQMLDRGWVIRHDAYYI*TVSFLG Trigger: TCCTAAAAAGGAGACTGTGCAAATGTAGTATGCATC...GTGTCTAATGACCCAGCCTCTGTCGAGCATTTGTACAGGTGGGGAATACATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR CCA 90 bp | ATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTCATAAGTGCTTTCTCTaGGCTTTTTGCAGGATGTGT | + |
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Preference number: 4 (lower is better) Translates to: IRRKAVKLQYILEACQSGHKCFL*AFCRMC Trigger: ACACATCCTGCAAAAAGCCCAGAGAAAGCACTTATG...ACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369582.6 |
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| CDS-3UTR CCA 90 bp | AAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGAGGTGACGTTCTTTTaGACCAACATCGTCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KLQYILEACQSGMVRKRREVTFF*TNIVFL Trigger: CAAGAAGACGATGTTGGTCCAAAAGAACGTCACCTC...TCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | TTAGGAAATATTTTTAGCACAAGTAAGCTGTACTTTCTCCCAACCTGCCCCTTGTTCTGTAGTAATCCATaGCGCTCCTTTCTCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LGNIFSTSKLYFLPTCPLFCSNP*RSFLWA Trigger: AGCCCAGAGAAAGGAGCGCCATGGATTACTACAGAA...CAAGGGGCAGGTTGGGAGAAAGTACAGCTTACTTGTGCTAAAAATATTTCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630630.2 |
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| CDS-3UTR TCA 90 bp | ATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTTGTGACCCTGTTATATaGTTTAGCTACACAGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: IRRKAVKLQYILEACQSGCDPVI*FSYTAS Trigger: ACTTGCTGTGTAGCTAAATCATATAACAGGGTCACA...ACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR TCA 90 bp | AGGATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTAAAGAACTAGACTGCTaGTTGTACTGTAGGATAAGG | + |
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Preference number: 4 (lower is better) Translates to: RIRRKAVKLQYILEACQSKELDC*LYCRIR Trigger: CCTTATCCTACAGTACAATCAGCAGTCTAGTTCTTT...ACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR TCA 90 bp | ATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTAAAGAACTAGACTGCTaGTTGTACTGTAGGATAAGG | + |
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Preference number: 4 (lower is better) Translates to: IRRKAVKLQYILEACQSGKELDC*LYCRIR Trigger: CCTTATCCTACAGTACAATCAGCAGTCTAGTTCTTT...ACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR GCA 90 bp | CAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTAGCGGAATGGAGAACATaGAGAAACACCGACAATGTG | + |
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Preference number: 4 (lower is better) Translates to: QYILEACQSGMVRKRRVLAEWRT*RNTDNV Trigger: CACATTGTCGGTGTTTCTGCATGTTCTCCATTCCGC...TAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | CAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTACCAACATCGTCTTCTTaGACCTTAGTGGAGTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: QYILEACQSGMVRKRRVLPTSSS*TLVEWD Trigger: ATCCCACTCCACTAAGGTCCAAGAAGACGATGTTGG...TAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR TCA 90 bp | TATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTATCTAAGTGGACTCTGAGGTaGCGTTCTTTTGGACCAACA | + |
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Preference number: 4 (lower is better) Translates to: YILEACQSGMVRKRRVLSKWTLR*RSFGPT Trigger: TGTTGGTCCAAAAGAACGTCACCTCAGAGTCCACTT...AGATAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR GCA 90 bp | TATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTATCTGATAATAACAAGTACTaGAGTGGCACGCCGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: YILEACQSGMVRKRRVLSDNNKY*SGTPCG Trigger: ACCACACGGCGTGCCACTGCAGTACTTGTTATTATC...AGATAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
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| CDS-3UTR CCA 90 bp | ATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTAGGCTTTATTTGCAGTaGAACAAGCTAAATGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IRRKAVKLQYILEACQSGRLYLQ*NKLNAV Trigger: TACAGCATTTAGCTTGTTCCACTGCAAATAAAGCCT...ACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS-3UTR TCA 90 bp | TATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTATCTGCTGCAGTATATCCTTaGAGCGTGTCAAAGTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YILEACQSGMVRKRRVLSAAVYP*SVSKWY Trigger: ATACCACTTTGACACGCTTCAAGGATATACTGCAGC...AGATAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS-3UTR CCA 90 bp | TATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTATCTGAGGTGACGTTCTTTTaGACCAACATCGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YILEACQSGMVRKRRVLSEVTFF*TNIVFL Trigger: CAAGAAGACGATGTTGGTCCAAAAGAACGTCACCTC...AGATAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS-3UTR TCA 90 bp | CAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTATGTGACCCTGTTATATaGTTTAGCTACACAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QYILEACQSGMVRKRRVLCDPVI*FSYTAS Trigger: ACTTGCTGTGTAGCTAAATCATATAACAGGGTCACA...TAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS-3UTR GCA 90 bp | GCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAGACCAGAAAGATAGCTaGATATTTTCTGTAGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: AVKLQYILEACQSGMVRKDQKDS*IFSVVI Trigger: GATTACTACAGAAAATATGCAGCTATCTTTCTGGTC...TTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS-3UTR GCA 90 bp | TTAGGAAATATTTTTAGCACAAGTAAGCTGTACTTTCTCCCAACCTGCCCCTTGGCTGAAATAAGTAGATaGATACTACATTTGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGNIFSTSKLYFLPTCPLAEISR*ILHLHS Trigger: ACTGTGCAAATGTAGTATGCATCTACTTATTTCAGC...CAAGGGGCAGGTTGGGAGAAAGTACAGCTTACTTGTGCTAAAAATATTTCCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630630.2 |
||
| CDS-3UTR CCA 90 bp | CAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTAAGGCTTTATTTGCAGTaGAACAAGCTAAATGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QYILEACQSGMVRKRRVLRLYLQ*NKLNAV Trigger: TACAGCATTTAGCTTGTTCCACTGCAAATAAAGCCT...TAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS-3UTR GCA 90 bp | TATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTATCTGACCAGAAAGATAGCTaGATATTTTCTGTAGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: YILEACQSGMVRKRRVLSDQKDS*IFSVVI Trigger: GATTACTACAGAAAATATGCAGCTATCTTTCTGGTC...AGATAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS-3UTR GCA 90 bp | TTGCATTCTGCTGAAATAAGTAGATGCATACTACATTTGCACAGTCTCCTTTTTGACCAGAAAGATAGCTaGATATTTTCTGTAGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: LHSAEISRCILHLHSLLFDQKDS*IFSVVI Trigger: GATTACTACAGAAAATATGCAGCTATCTTTCTGGTC...AAAAAGGAGACTGTGCAAATGTAGTATGCATCTACTTATTTCAGCAGAATGCAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630630.2 |
||
| CDS-3UTR CAA 90 bp | AGCACAAGTAAGCTGTACTTTCTCCCAACCTGCCCCTTGTCACCTCTACCCCTAATGTGTTCAGGGCGGTaGACTGTGGATCCGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: STSKLYFLPTCPLSPLPLMCSGR*TVDPKR Trigger: CCTCTTCGGATCCACAGTCAACCGCCCTGAACACAT...TAGGGGTAGAGGTGACAAGGGGCAGGTTGGGAGAAAGTACAGCTTACTTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630630.2 |
||
| CDS-3UTR CAA 90 bp | AAATGTATTCCCCACCTGTACAAATGCTCGACAGAGGCTGGGTCATTAGACACCCTCCCAACCTGCCCCTaGTCACCTCTACCCCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: KCIPHLYKCSTEAGSLDTLPTCP*SPLPLF Trigger: GAATAGGGGTAGAGGTGACAAGGGGCAGGTTGGGAG...GGTGTCTAATGACCCAGCCTCTGTCGAGCATTTGTACAGGTGGGGAATACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000630630.2 |
||
| CDS TCA 90 bp | GGCGCTCCTTTCTCTGGGCTTTTTGCAGGATGTGTTCAGGGCGGTTaGCTGTGGATCCGAAGAGGGATTTTAGCTTCGTCTTATGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAPFSGLFAGCVQGG*LWIRRGILASSYEF Trigger: GAACTCATAAGACGAAGCTAAAATCCCTCTTCGGATCCACAGTCAACCGCCCTGAACACATCCTGCAAAAAGCCCAGAGAAAGGAGCGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000610310.3 ENST00000627148.3 ENST00000627552.1 ENST00000630630.2 |
||
| CDS-3UTR CAA 90 bp | GAAATGTATTCCCCACCTGTACAAATGCTCGACAGAGGCTGGGTCATTAGACACCTTTCTCTGGGCTTTTaGCAGGATGTGTTCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EMYSPPVQMLDRGWVIRHLSLGF*QDVFRA Trigger: CGCCCTGAACACATCCTGCAAAAAGCCCAGAGAAAG...GTGTCTAATGACCCAGCCTCTGTCGAGCATTTGTACAGGTGGGGAATACATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630630.2 |
||
| CDS CCA 90 bp | GGCAATCACAAATTTGGTCACGCACCCTGCACATCAGGAGCGGAATaGAGAACATGCAGAAACACCGACAATGTGACCAGAAAGATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GNHKFGHAPCTSGAE*RTCRNTDNVTRKIA Trigger: AGCTATCTTTCTGGTCACATTGTCGGTGTTTCTGCATGTTCTCCATTCCGCTCCTGATGTGCAGGGTGCGTGACCAAATTTGTGATTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369582.6 |
||
| CDS-3UTR CAA 90 bp | GAAATGTATTCCCCACCTGTACAAATGCTCGACAGAGGCTGGGTCATTAGACACACCAACATCGTCTTCTaGGACCTTAGTGGAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EMYSPPVQMLDRGWVIRHTNIVF*DLSGVG Trigger: TCCCACTCCACTAAGGTCCAAGAAGACGATGTTGGT...GTGTCTAATGACCCAGCCTCTGTCGAGCATTTGTACAGGTGGGGAATACATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630630.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGTGTTCAGGGCGGTaGACTGTGGATCCGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IRRKAVKLQYILEACQSGMCSGR*TVDPKR Trigger: CCTCTTCGGATCCACAGTCAACCGCCCTGAACACAT...ACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627148.3 |
||
| CDS CCA 90 bp | TTGAACCACAAATTTGGTCACGCACCCTGCACATCAGGAGCGGAATaGAGAACATGCAGAAACACCGACAATGTGACCAGAAAGATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LNHKFGHAPCTSGAE*RTCRNTDNVTRKIA Trigger: AGCTATCTTTCTGGTCACATTGTCGGTGTTTCTGCATGTTCTCCATTCCGCTCCTGATGTGCAGGGTGCGTGACCAAATTTGTGGTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627552.1 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGCTTTCTCTGGGCTTTTaGCAGGATGTGTTCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KAVKLQYILEACQSGMVRLSLGF*QDVFRA Trigger: CGCCCTGAACACATCCTGCAAAAAGCCCAGAGAAAG...CCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS GCA 90 bp | GTGCATTCTGGGCAATCCTGCACATCAGGAGCGGAATGGAGAACATaGAGAAACACCGACAATGTGACCAGAAAGATAGCTGCATATTTT | + |
|
Preference number: 5 (lower is better) Translates to: VHSGQSCTSGAEWRT*RNTDNVTRKIAAYF Trigger: AAAATATGCAGCTATCTTTCTGGTCACATTGTCGGTGTTTCTGCATGTTCTCCATTCCGCTCCTGATGTGCAGGATTGCCCAGAATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625577.1 ENST00000627148.3 ENST00000630630.2 |
||
| CDS-3UTR CAA 90 bp | AGGATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTTGGGCAATCACAAATTaGGTCACGCACCCTGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: RIRRKAVKLQYILEACQSWAITN*VTHPAH Trigger: ATGTGCAGGGTGCGTGACCAAATTTGTGATTGCCCA...ACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369582.6 |
||
| CDS-3UTR CAA 90 bp | TATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTATCTCCATGCACTGAAGTATaGGGGCACCCGGCTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YILEACQSGMVRKRRVLSPCTEV*GHPAGR Trigger: TCTCCCAGCCGGGTGCCCCAATACTTCAGTGCATGG...AGATAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS-3UTR CAA 90 bp | ATAAGGAGGAAGGCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTACCAACATCGTCTTCTaGGACCTTAGTGGAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: IRRKAVKLQYILEACQSGTNIVF*DLSGVG Trigger: TCCCACTCCACTAAGGTCCAAGAAGACGATGTTGGT...ACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGCCTTCCTCCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS TCA 90 bp | TATAACACTTTCTCTGGGCTTTTTGCAGGATGTGTTCAGGGCGGTTaGCTGTGGATCCGAAGAGGGATTTTAGCTTCGTCTTATGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YNTFSGLFAGCVQGG*LWIRRGILASSYEF Trigger: GAACTCATAAGACGAAGCTAAAATCCCTCTTCGGATCCACAGTCAACCGCCCTGAACACATCCTGCAAAAAGCCCAGAGAAAGTGTTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000625577.1 |
||
| CDS GCA 90 bp | AAATTTGGTCACGCACCCTGCACATCAGGAGCGGAATGGAGAACATaGAGAAACACCGACAATGTGACCAGAAAGATAGCTGCATATTTT | + |
|
Preference number: 5 (lower is better) Translates to: KFGHAPCTSGAEWRT*RNTDNVTRKIAAYF Trigger: AAAATATGCAGCTATCTTTCTGGTCACATTGTCGGTGTTTCTGCATGTTCTCCATTCCGCTCCTGATGTGCAGGGTGCGTGACCAAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627552.1 |
||
| CDS CCA 90 bp | TATGATTTAGCTACACAGCAAGTGGACTCTGAGGTGACGTTCTTTTaGACCAACATCGTCTTCTTGGACCTTAGTGGAGTGGGATATGCT | + |
|
Preference number: 5 (lower is better) Translates to: YDLATQQVDSEVTFF*TNIVFLDLSGVGYA Trigger: AGCATATCCCACTCCACTAAGGTCCAAGAAGACGATGTTGGTCCAAAAGAACGTCACCTCAGAGTCCACTTGCTGTGTAGCTAAATCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369582.6 ENST00000610310.3 ENST00000627148.3 ENST00000630630.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAACCAACATCGTCTTCTaGGACCTTAGTGGAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVKLQYILEACQSGMVRKTNIVF*DLSGVG Trigger: TCCCACTCCACTAAGGTCCAAGAAGACGATGTTGGT...TTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS GCA 90 bp | ATGGAGAACATGCAGAAACACCGACAATGTGACCAGAAAGATAGCTaGATATTTTCTGTAGTAATCCATGGCGCTCCCTATGATCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: MENMQKHRQCDQKDS*IFSVVIHGAPYDHS Trigger: GCTGTGATCATAGGGAGCGCCATGGATTACTACAGAAAATATGCAGCTATCTTTCTGGTCACATTGTCGGTGTTTCTGCATGTTCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369582.6 |
||
| CDS GCA 90 bp | ATGGAGAACATGCAGAAACACCGACAATGTGACCAGAAAGATAGCTaGATATTTTCTGTAGTAATCCATGGCGCTCCTTTCTCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MENMQKHRQCDQKDS*IFSVVIHGAPFSGL Trigger: AAGCCCAGAGAAAGGAGCGCCATGGATTACTACAGAAAATATGCAGCTATCTTTCTGGTCACATTGTCGGTGTTTCTGCATGTTCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000610310.3 ENST00000627148.3 ENST00000627552.1 ENST00000630630.2 |
||
| CDS GCA 90 bp | ATGGAGAACATGCAGAAACACCGACAATGTGACCAGAAAGATAGCTaGATATTTTCTGTAGTAATCCATGGCGCTCCATATGCCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: MENMQKHRQCDQKDS*IFSVVIHGAPYAPT Trigger: TGTTGGGGCATATGGAGCGCCATGGATTACTACAGAAAATATGCAGCTATCTTTCTGGTCACATTGTCGGTGTTTCTGCATGTTCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625577.1 |
||
| CDS CCA 90 bp | TTGGCATTAAATTCCATGGGTGGGCTCTATGAACATTTCTCTGATTaGGCTGTTAGAAAGCTTCTGGGGATCTTGAGGTTCTTACCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LALNSMGGLYEHFSD*AVRKLLGILRFLPC Trigger: ACAGGGTAAGAACCTCAAGATCCCCAGAAGCTTTCTAACAGCCCAATCAGAGAAATGTTCATAGAGCCCACCCATGGAATTTAATGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630630.2 |
||
| CDS-3UTR CAA 90 bp | TATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTATCTCTTTCTCTGGGCTTTTaGCAGGATGTGTTCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: YILEACQSGMVRKRRVLSLSLGF*QDVFRA Trigger: CGCCCTGAACACATCCTGCAAAAAGCCCAGAGAAAG...AGATAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS-3UTR CAA 90 bp | GCAGTAAAGCTGCAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGCTGCAGTATATCCTaGAAGCGTGTCAAAGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AVKLQYILEACQSGMVRKSCSIS*KRVKVV Trigger: TACCACTTTGACACGCTTCAAGGATATACTGCAGCT...TTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTGCAGCTTTACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS TCA 90 bp | GGAGTTATTGATGTACATCTAGAAATGTGTGTTGTCCTTATTACTTaGACCACAAATTTGGTCACGCACCCTGCACATCAGGAGCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GVIDVHLEMCVVLIT*TTNLVTHPAHQERN Trigger: ATTCCGCTCCTGATGTGCAGGGTGCGTGACCAAATTTGTGGTTCAAGTAATAAGGACAACACACATTTCTAGATGTACATCAATAACTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627552.1 |
||
| CDS-3UTR CAA 90 bp | TTAGGAAATATTTTTAGCACAAGTAAGCTGTACTTTCTCCCAACCTGCCCCTTGAAGCTTCTGGGGATCTaGAGGTTCTTACCCTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LGNIFSTSKLYFLPTCPLKLLGI*RFLPCY Trigger: ATAACAGGGTAAGAACCTCAAGATCCCCAGAAGCTT...CAAGGGGCAGGTTGGGAGAAAGTACAGCTTACTTGTGCTAAAAATATTTCCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000630630.2 |
||
| CDS-3UTR CAA 90 bp | CAGTATATCCTTGAAGCGTGTCAAAGTGGTATGGTAAGGAAAAGGAGAGTTTTAAGCTGCAGTATATCCTaGAAGCGTGTCAAAGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QYILEACQSGMVRKRRVLSCSIS*KRVKVV Trigger: TACCACTTTGACACGCTTCAAGGATATACTGCAGCT...TAAAACTCTCCTTTTCCTTACCATACCACTTTGACACGCTTCAAGGATATACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627148.3 |
||
| CDS-3UTR CAA 90 bp | TTAGGAAATATTTTTAGCACAAGTAAGCTGTACTTTCTCCCAACCTGCCCCTTGAGATGCATACTACATTaGCACAGTCTCCTTTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGNIFSTSKLYFLPTCPLRCILH*HSLLFR Trigger: CCTAAAAAGGAGACTGTGCAAATGTAGTATGCATCT...CAAGGGGCAGGTTGGGAGAAAGTACAGCTTACTTGTGCTAAAAATATTTCCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000630630.2 |
||
| CDS GCA 72 bp | CACCCGGCTGGGAGAAGAATGGGTTTTCCTGTAGCGTaGATTCTGGGCAATCCTGCACATCAGGAGCGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HPAGRRMGFPVA*ILGNPAHQERN Trigger: ATTCCGCTCCTGATGTGCAGGATTGCCCAGAATGCACGCTACAGGAAAACCCATTCTTCTCCCAGCCGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625577.1 ENST00000627148.3 ENST00000630630.2 |
||
| CDS CCA 72 bp | TGCTCTAGAGAAGCAGCAGCCCATGCACTGAAGTATTaGGGCACCCGGCTGGGAGAAGAATGGGTTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSREAAAHALKY*GTRLGEEWVFL Trigger: CAGGAAAACCCATTCTTCTCCCAGCCGGGTGCCCCAATACTTCAGTGCATGGGCTGCTGCTTCTCTAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000369582.6 ENST00000610310.3 ENST00000625577.1 ENST00000627148.3 ENST00000630630.2 |
||
| CDS GCA 72 bp | CACCCGGCTGGGAGAAGAATGGGTTTTCCTGTAGCGTaGATTCTGGGCAATCACAAATTTGGTCACGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: HPAGRRMGFPVA*ILGNHKFGHAP Trigger: GGGTGCGTGACCAAATTTGTGATTGCCCAGAATGCACGCTACAGGAAAACCCATTCTTCTCCCAGCCGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369582.6 |
||
| CDS CAA 90 bp | CAAGTGGACTCTGAGGTGACGTTCTTTTGGACCAACATCGTCTTCTaGGACCTTAGTGGAGTGGGATATGCTCTAGAGAAGCAGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QVDSEVTFFWTNIVF*DLSGVGYALEKQQP Trigger: GGGCTGCTGCTTCTCTAGAGCATATCCCACTCCACTAAGGTCCAAGAAGACGATGTTGGTCCAAAAGAACGTCACCTCAGAGTCCACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369582.6 ENST00000610310.3 ENST00000627148.3 ENST00000630630.2 |
||
| CDS TCA 72 bp | TTCTCTGGGCTTTTTGCAGGATGTGTTCAGGGCGGTTaGCTGTGGATCCGAAGAGGGATTTTAGCTTCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSGLFAGCVQGG*LWIRRGILASS Trigger: AGACGAAGCTAAAATCCCTCTTCGGATCCACAGTCAACCGCCCTGAACACATCCTGCAAAAAGCCCAGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000610310.3 ENST00000625577.1 ENST00000627148.3 ENST00000627552.1 ENST00000630630.2 |
||
| CDS CCA 72 bp | AAATTTGGTCACGCACCCTGCACATCAGGAGCGGAATaGAGAACATGCAGAAACACCGACAATGTGACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KFGHAPCTSGAE*RTCRNTDNVTR Trigger: TCTGGTCACATTGTCGGTGTTTCTGCATGTTCTCCATTCCGCTCCTGATGTGCAGGGTGCGTGACCAAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369582.6 ENST00000627552.1 |
||
| CDS CCA 72 bp | GCTACACAGCAAGTGGACTCTGAGGTGACGTTCTTTTaGACCAACATCGTCTTCTTGGACCTTAGTGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ATQQVDSEVTFF*TNIVFLDLSGV Trigger: CACTCCACTAAGGTCCAAGAAGACGATGTTGGTCCAAAAGAACGTCACCTCAGAGTCCACTTGCTGTGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369582.6 ENST00000610310.3 ENST00000627148.3 ENST00000630630.2 |
||
| CDS CAA 72 bp | TTTCTCTGGGCTTTTTGCAGGATGTGTTCAGGGCGGTaGACTGTGGATCCGAAGAGGGATTTTAGCTTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: FLWAFCRMCSGR*TVDPKRDFSFV Trigger: GACGAAGCTAAAATCCCTCTTCGGATCCACAGTCAACCGCCCTGAACACATCCTGCAAAAAGCCCAGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000610310.3 ENST00000625577.1 ENST00000627148.3 ENST00000627552.1 ENST00000630630.2 |
||
| CDS CAA 72 bp | TCTGAGGTGACGTTCTTTTGGACCAACATCGTCTTCTaGGACCTTAGTGGAGTGGGATATGCTCTAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SEVTFFWTNIVF*DLSGVGYALEK Trigger: CTTCTCTAGAGCATATCCCACTCCACTAAGGTCCAAGAAGACGATGTTGGTCCAAAAGAACGTCACCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369582.6 ENST00000610310.3 ENST00000627148.3 ENST00000630630.2 |
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| CDS GCA 72 bp | TGTAGTAATCCATGGCGCTCCATATGCCCCAACAGTTaGACTTTTGGGCATTTATCTCAGAGAAATGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: CSNPWRSICPNS*TFGHLSQRNED Trigger: GTCTTCATTTCTCTGAGATAAATGCCCAAAAGTGCAACTGTTGGGGCATATGGAGCGCCATGGATTACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625577.1 |
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| CDS GCA 72 bp | CTGCATATTTTCTGTAGTAATCCATGGCGCTCCATATaGCCCAACAGTTGCACTTTTGGGCATTTATCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LHIFCSNPWRSI*PNSCTFGHLSQ Trigger: CTGAGATAAATGCCCAAAAGTGCAACTGTTGGGGCATATGGAGCGCCATGGATTACTACAGAAAATATGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625577.1 |
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| CDS CAA 72 bp | ATCCATGGCGCTCCATATGCCCCAACAGTTGCACTTTaGGGCATTTATCTCAGAGAAATGAAGACTATGTTC | + |
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Preference number: 6 (lower is better) Translates to: IHGAPYAPTVAL*GIYLREMKTMF Trigger: GAACATAGTCTTCATTTCTCTGAGATAAATGCCCAAAAGTGCAACTGTTGGGGCATATGGAGCGCCATGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625577.1 |
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| CDS GCA 72 bp | ATGCAGAAACACCGACAATGTGACCAGAAAGATAGCTaGATATTTTCTGTAGTAATCCATGGCGCTCCCTAT | + |
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Preference number: 6 (lower is better) Translates to: MQKHRQCDQKDS*IFSVVIHGAPY Trigger: ATAGGGAGCGCCATGGATTACTACAGAAAATATGCAGCTATCTTTCTGGTCACATTGTCGGTGTTTCTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369582.6 |
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| CDS GCA 72 bp | ATGCAGAAACACCGACAATGTGACCAGAAAGATAGCTaGATATTTTCTGTAGTAATCCATGGCGCTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: MQKHRQCDQKDS*IFSVVIHGAPF Trigger: GAAAGGAGCGCCATGGATTACTACAGAAAATATGCAGCTATCTTTCTGGTCACATTGTCGGTGTTTCTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000610310.3 ENST00000627148.3 ENST00000627552.1 ENST00000630630.2 |
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| CDS CAA 90 bp | TCTGTAGTAATCCATGGCGCTCCATATGCCCCAACAGTTGCACTTTaGGGCATTTATCTCAGAGAAATGAAGACTATGTTCACACAAAAC | + |
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Preference number: 6 (lower is better) Translates to: SVVIHGAPYAPTVAL*GIYLREMKTMFTQN Trigger: GTTTTGTGTGAACATAGTCTTCATTTCTCTGAGATAAATGCCCAAAAGTGCAACTGTTGGGGCATATGGAGCGCCATGGATTACTACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625577.1 |
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| CDS TCA 72 bp | GATGTACATCTAGAAATGTGTGTTGTCCTTATTACTTaGACCACAAATTTGGTCACGCACCCTGCACATCAG | + |
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Preference number: 6 (lower is better) Translates to: DVHLEMCVVLIT*TTNLVTHPAHQ Trigger: CTGATGTGCAGGGTGCGTGACCAAATTTGTGGTTCAAGTAATAAGGACAACACACATTTCTAGATGTACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627552.1 |
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| CDS GCA 72 bp | ATGCAGAAACACCGACAATGTGACCAGAAAGATAGCTaGATATTTTCTGTAGTAATCCATGGCGCTCCATAT | + |
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Preference number: 6 (lower is better) Translates to: MQKHRQCDQKDS*IFSVVIHGAPY Trigger: ATATGGAGCGCCATGGATTACTACAGAAAATATGCAGCTATCTTTCTGGTCACATTGTCGGTGTTTCTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625577.1 |
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| CDS TCA 72 bp | ACACAGCAGCTTGAATGGATCTCAAGAGAATTGTGCTaGATGCAGGCTGAATACTATATGATTCCATTTATA | + |
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Preference number: 6 (lower is better) Translates to: TQQLEWISRELC*MQAEYYMIPFI Trigger: TATAAATGGAATCATATAGTATTCAGCCTGCATTCAGCACAATTCTCTTGAGATCCATTCAAGCTGCTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625577.1 |
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