Pregenerated sensors for CFI (Homo sapiens)
Ensembl gene IDs: ENSG00000205403Ensembl transcript IDs: ENST00000394634.7, ENST00000394635.8, ENST00000504853.3, ENST00000510800.1, ENST00000512148.5, ENST00000515512.1, ENST00000643384.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACCAATATAAATTCCCCCACAGGTGATTCCACTGGCATCCTTAATTaGCACCTGCCATGGGAGGTCTCCCAGTTGTGCTCGCTTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TNINSPTGDSTGILN*HLPWEVSQLCSLSS Trigger: GGAGGAAAGCGAGCACAACTGGGAGACCTCCCATGGCAGGTGGCAATTAAGGATGCCAGTGGAATCACCTGTGGGGGAATTTATATTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS CCA 90 bp | TGCTACAGCCAGAAGGCCAAATGGAGGGAATTAGGGCCCAAAGCATaGGGGCTGATGTGGTGGGAGGAGATGTTTGATAGGGGAAATACA | + |
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Preference number: 5 (lower is better) Translates to: CYSQKAKWRELGPKA*GLMWWEEMFDRGNT Trigger: TGTATTTCCCCTATCAAACATCTCCTCCCACCACATCAGCCCCCATGCTTTGGGCCCTAATTCCCTCCATTTGGCCTTCTGGCTGTAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515512.1 |
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| CDS GCA 90 bp | TCTTTGGGCACTGATACGGTAGTTTACAAACACAGGTGCCCTCAATaGATCTCTGCCATGGCTGGCAGAAGACTTTATCGCAGGAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: SLGTDTVVYKHRCPQ*ISAMAGRRLYRRRG Trigger: ACCTCTCCTGCGATAAAGTCTTCTGCCAGCCATGGCAGAGATGCATTGAGGGCACCTGTGTTTGTAAACTACCGTATCAGTGCCCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000510800.1 ENST00000512148.5 |
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| CDS GCA 90 bp | CAGTGCCATTCTTTGGGCACTGATACGGTAGTTTACAAACACAGGTaGCCTCAATGCATCTCTGCCATGGCTGGCAGAAGACTTTATCGC | + |
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Preference number: 5 (lower is better) Translates to: QCHSLGTDTVVYKHR*PQCISAMAGRRLYR Trigger: GCGATAAAGTCTTCTGCCAGCCATGGCAGAGATGCATTGAGGGCACCTGTGTTTGTAAACTACCGTATCAGTGCCCAAAGAATGGCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000510800.1 ENST00000512148.5 |
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| CDS TCA 90 bp | CTTCTCCTGTTAGTTGCACACACTGCAGTGCCATTCTTTGGGCACTaGTACGGTAGTTTACAAACACAGGTGCCCTCAATGCATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LLLLVAHTAVPFFGH*YGSLQTQVPSMHLC Trigger: GCAGAGATGCATTGAGGGCACCTGTGTTTGTAAACTACCGTATCAGTGCCCAAAGAATGGCACTGCAGTGTGTGCAACTAACAGGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000510800.1 ENST00000512148.5 |
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| CDS CCA 90 bp | AAGGCCAAATGGAGGGAATTAGGGCCCAAAGCATGGGGGCTGATGTaGTGGGAGGAGATGTTTGATAGGGGAAATACATACATCTTGACA | + |
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Preference number: 5 (lower is better) Translates to: KAKWRELGPKAWGLM*WEEMFDRGNTYILT Trigger: TGTCAAGATGTATGTATTTCCCCTATCAAACATCTCCTCCCACCACATCAGCCCCCATGCTTTGGGCCCTAATTCCCTCCATTTGGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515512.1 |
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| CDS TCA 90 bp | CCAACTTCATCTTCCCCTGTAATGCAGTCCACCTCACCATTGCATTaGTACTGGCTTGGAATGCAAACACCCGATTTGCAATGGAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: PTSSSPVMQSTSPLH*YWLGMQTPDLQWKP Trigger: AGGCTTCCATTGCAAATCGGGTGTTTGCATTCCAAGCCAGTATCAATGCAATGGTGAGGTGGACTGCATTACAGGGGAAGATGAAGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS GCA 90 bp | TTCTTGAGTCACAGATGCAAAGCCTTGAATTGTAGGATGTCTAGCTaGTGCACAGCCAACTTCATCTTCCCCTGTAATGCAGTCCACCTC | + |
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Preference number: 5 (lower is better) Translates to: FLSHRCKALNCRMSS*CTANFIFPCNAVHL Trigger: GAGGTGGACTGCATTACAGGGGAAGATGAAGTTGGCTGTGCAGCAGCTAGACATCCTACAATTCAAGGCTTTGCATCTGTGACTCAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394635.8 |
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| CDS GCA 90 bp | CCTCACCATTGCATTGATACTGGCTTGGAATGCAAACACCCGATTTaGAATGGAAGCCTTTGCCTTGGCATGCTTTACAACACAGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: PHHCIDTGLECKHPI*NGSLCLGMLYNTVH Trigger: ATGAACTGTGTTGTAAAGCATGCCAAGGCAAAGGCTTCCATTGCAAATCGGGTGTTTGCATTCCAAGCCAGTATCAATGCAATGGTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS CCA 90 bp | TCCTTTTGGGAATCTCTCTGCCTGCCCCATGCTGTAAACTTTAGCTaGTTGGTTCAATTATTGCCTAAGACTTGGAAGGTTAGGTTAGTT | + |
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Preference number: 5 (lower is better) Translates to: SFWESLCLPHAVNFS*LVQLLPKTWKVRLV Trigger: AACTAACCTAACCTTCCAAGTCTTAGGCAATAATTGAACCAACCAGCTAAAGTTTACAGCATGGGGCAGGCAGAGAGATTCCCAAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS TCA 90 bp | CATCTGTGTGCCATTGCTTGGACTTCTCAATTTGCTCAGAATTTGTaGGAAGAGACTTCCTCAGTGACGTATTATCCTAGAGATGATGAT | + |
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Preference number: 5 (lower is better) Translates to: HLCAIAWTSQFAQNL*EETSSVTYYPRDDD Trigger: ATCATCATCTCTAGGATAATACGTCACTGAGGAAGTCTCTTCTCACAAATTCTGAGCAAATTGAGAAGTCCAAGCAATGGCACACAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS GCA 90 bp | TCCACAAGTTTTACTTCAACTATTCCCTCTGAATCTGTATTTCCATaGTTCAAGGAAACACTAAACTTTCCTTCGGCTGTGCATGTTCCG | + |
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Preference number: 5 (lower is better) Translates to: STSFTSTIPSESVFP*FKETLNFPSAVHVP Trigger: CGGAACATGCACAGCCGAAGGAAAGTTTAGTGTTTCCTTGAAGCATGGAAATACAGATTCAGAGGGAATAGTTGAAGTAAAACTTGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000510800.1 ENST00000512148.5 |
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| CDS TCA 90 bp | CATTCTCTATATAGGAGTTACAGCTTGGGCAAGATACCGAAACTCTaGGCCTCAGTACCTTCATCTATAAAAGGGAATATAACTACCTCA | + |
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Preference number: 5 (lower is better) Translates to: HSLYRSYSLGKIPKL*ASVPSSIKGNITTS Trigger: TGAGGTAGTTATATTCCCTTTTATAGATGAAGGTACTGAGGCTCAGAGTTTCGGTATCTTGCCCAAGCTGTAACTCCTATATAGAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS GCA 90 bp | CCCAGTTGTGCTCGCTTTCCTCCCACAATTCGTTTCCTTCGAATGTaGATTCTGTTTTTAACTCCACAAGATAGTTTAGGTAATAATGAT | + |
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Preference number: 5 (lower is better) Translates to: PSCARFPPTIRFLRM*ILFLTPQDSLGNND Trigger: ATCATTATTACCTAAACTATCTTGTGGAGTTAAAAACAGAATGCACATTCGAAGGAAACGAATTGTGGGAGGAAAGCGAGCACAACTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS GCA 90 bp | GACCTTTACTGGAGTTCTTTATTTCTTCATATTACTTCAAGTAACTaGCAAATGTCCTTTCACTGCAGTATGCAGGGTTCTCTGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: DLYWSSLFLHITSSN*QMSFHCSMQGSLTC Trigger: GCAAGTCAGAGAACCCTGCATACTGCAGTGAAAGGACATTTGGCAGTTACTTGAAGTAATATGAAGAAATAAAGAACTCCAGTAAAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643384.1 |
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| CDS CCA 90 bp | AAGCTACATCTTCACTTCAGCCTTGACAGTATTAAGGTGATATTTTaGCATCTGTGTGCCATTGCTTGGACTTCTCAATTTGCTCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: KLHLHFSLDSIKVIF*HLCAIAWTSQFAQN Trigger: ATTCTGAGCAAATTGAGAAGTCCAAGCAATGGCACACAGATGCCAAAATATCACCTTAATACTGTCAAGGCTGAAGTGAAGATGTAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS CCA 90 bp | TGGGAGGAGATGTTTGATAGGGGAAATACATACATCTTGACATCTTaGATAAACCACTTGGCACTTACCTGCACATTCCATTTCTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: WEEMFDRGNTYILTS*INHLALTCTFHFFF Trigger: GAAAAAGAAATGGAATGTGCAGGTAAGTGCCAAGTGGTTTATCCAAGATGTCAAGATGTATGTATTTCCCCTATCAAACATCTCCTCCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515512.1 |
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| CDS TCA 90 bp | TTTACAGTAAGCTACATCTTCACTTCAGCCTTGACAGTATTAAGGTaGTATTTTGGCATCTGTGTGCCATTGCTTGGACTTCTCAATTTG | + |
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Preference number: 5 (lower is better) Translates to: FTVSYIFTSALTVLR*YFGICVPLLGLLNL Trigger: CAAATTGAGAAGTCCAAGCAATGGCACACAGATGCCAAAATATCACCTTAATACTGTCAAGGCTGAAGTGAAGATGTAGCTTACTGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS GCA 90 bp | TTAGTAAAAGTACATTCAGCCAAACTGGTCTCTAATCCTCGGCAATaGACATGTAGACATTCAGTGGAATTTATAGAGAGATCAGACAAC | + |
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Preference number: 5 (lower is better) Translates to: LVKVHSAKLVSNPRQ*TCRHSVEFIERSDN Trigger: GTTGTCTGATCTCTCTATAAATTCCACTGAATGTCTACATGTGCATTGCCGAGGATTAGAGACCAGTTTGGCTGAATGTACTTTTACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS TCA 90 bp | GGACTTCTCAATTTGCTCAGAATTTGTGAGAAGAGACTTCCTCAGTaGCGTATTATCCTAGAGATGATGATTTACAGTGAACTATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: GLLNLLRICEKRLPQ*RIILEMMIYSELFF Trigger: GAAGAATAGTTCACTGTAAATCATCATCTCTAGGATAATACGTCACTGAGGAAGTCTCTTCTCACAAATTCTGAGCAAATTGAGAAGTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS TCA 90 bp | TTGGACAAATTATGTAACTGCTCTGCATCTCAGATGCCTTATCTATaGTCTTCAATTTTACAAATGAAGAAACCTGCTCAAGGTCACATG | + |
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Preference number: 5 (lower is better) Translates to: LDKLCNCSASQMPYL*SSILQMKKPAQGHM Trigger: CATGTGACCTTGAGCAGGTTTCTTCATTTGTAAAATTGAAGATCATAGATAAGGCATCTGAGATGCAGAGCAGTTACATAATTTGTCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515512.1 |
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| CDS CCA 90 bp | GATTATAATGTGTCTTGGTTTGAACCTTTTTGTGTTTATCCTTCTTaGATTGCATTGAGCTTTTTGAATGTGGACAGCCATGCATTTGAT | + |
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Preference number: 5 (lower is better) Translates to: DYNVSWFEPFCVYPS*IALSFLNVDSHAFD Trigger: ATCAAATGCATGGCTGTCCACATTCAAAAAGCTCAATGCAATCCAAGAAGGATAAACACAAAAAGGTTCAAACCAAGACACATTATAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000643384.1 |
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| CDS CCA 90 bp | CTTTTTCTCCACCAGATCCTCTTGAGATGTATAAGTGACCTTTACTaGAGTTCTTTATTTCTTCATATTACTTCAAGTAACTGCCAAATG | + |
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Preference number: 5 (lower is better) Translates to: LFLHQILLRCISDLY*SSLFLHITSSNCQM Trigger: CATTTGGCAGTTACTTGAAGTAATATGAAGAAATAAAGAACTCCAGTAAAGGTCACTTATACATCTCAAGAGGATCTGGTGGAGAAAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643384.1 |
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| CDS GCA 72 bp | CCACAGGTGATTCCACTGGCATCCTTAATTGCCACCTaGCATGGGAGGTCTCCCAGTTGTGCTCGCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PQVIPLASLIAT*HGRSPSCARFP Trigger: AGGAAAGCGAGCACAACTGGGAGACCTCCCATGGCAGGTGGCAATTAAGGATGCCAGTGGAATCACCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS GCA 72 bp | AATTCCCCCACAGGTGATTCCACTGGCATCCTTAATTaGCACCTGCCATGGGAGGTCTCCCAGTTGTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: NSPTGDSTGILN*HLPWEVSQLCS Trigger: CGAGCACAACTGGGAGACCTCCCATGGCAGGTGGCAATTAAGGATGCCAGTGGAATCACCTGTGGGGGAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS CCA 72 bp | CAGAAGGCCAAATGGAGGGAATTAGGGCCCAAAGCATaGGGGCTGATGTGGTGGGAGGAGATGTTTGATAGG | + |
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Preference number: 6 (lower is better) Translates to: QKAKWRELGPKA*GLMWWEEMFDR Trigger: CCTATCAAACATCTCCTCCCACCACATCAGCCCCCATGCTTTGGGCCCTAATTCCCTCCATTTGGCCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515512.1 |
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| CDS TCA 72 bp | GCCATGAGAAAATCCACTGATACAAGCGCTCACTGTTaGAACCCAAGGTCAAGGCAGGCCACGTTGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: AMRKSTDTSAHC*NPRSRQATLAS Trigger: GGAAGCCAACGTGGCCTGCCTTGACCTTGGGTTTCAACAGTGAGCGCTTGTATCAGTGGATTTTCTCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510800.1 |
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| CDS GCA 72 bp | GGTAGTTTACAAACACAGGTGCCCTCAATGCATCTCTaGCATGGCTGGCAGAAGACTTTATCGCAGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GSLQTQVPSMHL*HGWQKTLSQER Trigger: CCTCTCCTGCGATAAAGTCTTCTGCCAGCCATGGCAGAGATGCATTGAGGGCACCTGTGTTTGTAAACTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000510800.1 ENST00000512148.5 |
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| CDS CAA 72 bp | CAGGCCACGTTGGCTTCCCTCATGCTCCAGCTGCTTTaGCATATGAACATTGTCTTATCTTGGTCCACAAGT | + |
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Preference number: 6 (lower is better) Translates to: QATLASLMLQLL*HMNIVLSWSTS Trigger: ACTTGTGGACCAAGATAAGACAATGTTCATATGCAAAAGCAGCTGGAGCATGAGGGAAGCCAACGTGGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000510800.1 ENST00000512148.5 |
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| CDS TCA 72 bp | TTAGTTGCACACACTGCAGTGCCATTCTTTGGGCACTaGTACGGTAGTTTACAAACACAGGTGCCCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: LVAHTAVPFFGH*YGSLQTQVPSM Trigger: CATTGAGGGCACCTGTGTTTGTAAACTACCGTATCAGTGCCCAAAGAATGGCACTGCAGTGTGTGCAACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000510800.1 ENST00000512148.5 |
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| CDS TCA 72 bp | TCTTCCCCTGTAATGCAGTCCACCTCACCATTGCATTaGTACTGGCTTGGAATGCAAACACCCGATTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: SSPVMQSTSPLH*YWLGMQTPDLQ Trigger: TTGCAAATCGGGTGTTTGCATTCCAAGCCAGTATCAATGCAATGGTGAGGTGGACTGCATTACAGGGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS GCA 72 bp | CACAGATGCAAAGCCTTGAATTGTAGGATGTCTAGCTaGTGCACAGCCAACTTCATCTTCCCCTGTAATGCA | + |
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Preference number: 6 (lower is better) Translates to: HRCKALNCRMSS*CTANFIFPCNA Trigger: TGCATTACAGGGGAAGATGAAGTTGGCTGTGCAGCAGCTAGACATCCTACAATTCAAGGCTTTGCATCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394635.8 |
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| CDS CAA 90 bp | ACGTTTAAGGTCGGGGTGTATCCAGTCTACTACTGTTGTCCATATTaGGTAACGATGAGTTTTACTGGCTCTGAGACAATGTGCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TFKVGVYPVYYCCPY*VTMSFTGSETMCSS Trigger: ACTGCTGCACATTGTCTCAGAGCCAGTAAAACTCATCGTTACCAAATATGGACAACAGTAGTAGACTGGATACACCCCGACCTTAAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS GCA 72 bp | AATTTCTGTTTCTTCTTGAGTCACAGATGCAAAGCCTaGACAGCCAACTTCATCTTCCCCTGTAATGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: NFCFFLSHRCKA*TANFIFPCNAV Trigger: GACTGCATTACAGGGGAAGATGAAGTTGGCTGTGCAGGCTTTGCATCTGTGACTCAAGAAGAAACAGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394634.7 ENST00000504853.3 |
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| CDS GCA 72 bp | TTGGCATCTGTGTGCCATTGCTTGGACTTCTCAATTTaGTCAGAATTTGTGAGAAGAGACTTCCTCAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LASVCHCLDFSI*SEFVRRDFLSD Trigger: GTCACTGAGGAAGTCTCTTCTCACAAATTCTGAGCAAATTGAGAAGTCCAAGCAATGGCACACAGATGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS CCA 72 bp | GAATCTCTCTGCCTGCCCCATGCTGTAAACTTTAGCTaGTTGGTTCAATTATTGCCTAAGACTTGGAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: ESLCLPHAVNFS*LVQLLPKTWKV Trigger: AACCTTCCAAGTCTTAGGCAATAATTGAACCAACCAGCTAAAGTTTACAGCATGGGGCAGGCAGAGAGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS CAA 72 bp | TGCATCCATGTCAGCAGTCAAAATTTCTGTTTCTTCTaGAGTCACAGATGCAAAGCCTGCACAGCCAACTTC | + |
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Preference number: 6 (lower is better) Translates to: CIHVSSQNFCFF*SHRCKACTANF Trigger: GAAGTTGGCTGTGCAGGCTTTGCATCTGTGACTCAAGAAGAAACAGAAATTTTGACTGCTGACATGGATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394634.7 ENST00000504853.3 |
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| CDS CAA 72 bp | GTCGGGGTGTATCCAGTCTACTACTGTTGTCCATATTaGGTAACGATGAGTTTTACTGGCTCTGAGACAATG | + |
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Preference number: 6 (lower is better) Translates to: VGVYPVYYCCPY*VTMSFTGSETM Trigger: CATTGTCTCAGAGCCAGTAAAACTCATCGTTACCAAATATGGACAACAGTAGTAGACTGGATACACCCCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS CAA 90 bp | CTGATGTGGTGGGAGGAGATGTTTGATAGGGGAAATACATACATCTaGACATCTTGGATAAACCACTTGGCACTTACCTGCACATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LMWWEEMFDRGNTYI*TSWINHLALTCTFH Trigger: ATGGAATGTGCAGGTAAGTGCCAAGTGGTTTATCCAAGATGTCAAGATGTATGTATTTCCCCTATCAAACATCTCCTCCCACCACATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515512.1 |
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| CDS GCA 72 bp | TTGGAATGCAAACACCCGATTTGCAATGGAAGCCTTTaGCTTGGCATGCTTTACAACACAGTTCATCACTTT | + |
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Preference number: 6 (lower is better) Translates to: LECKHPICNGSL*LGMLYNTVHHF Trigger: AAAGTGATGAACTGTGTTGTAAAGCATGCCAAGGCAAAGGCTTCCATTGCAAATCGGGTGTTTGCATTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS CAA 72 bp | CTTTGTCCCTGGATGAAGACATTCCAAACTCTTTTGTaGACAGTATGTTGGGAAGCTTCTCCTGTTAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LCPWMKTFQTLL*TVCWEASPVSC Trigger: GCAACTAACAGGAGAAGCTTCCCAACATACTGTCAACAAAAGAGTTTGGAATGTCTTCATCCAGGGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000510800.1 ENST00000512148.5 |
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| CDS CAA 72 bp | AATTTCTGTTTCTTCTTGAGTCACAGATGCAAAGCCTaGAATTGTAGGATGTCTAGCTGCTGCACAGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: NFCFFLSHRCKA*NCRMSSCCTAN Trigger: GTTGGCTGTGCAGCAGCTAGACATCCTACAATTCAAGGCTTTGCATCTGTGACTCAAGAAGAAACAGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394635.8 |
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| CDS CAA 72 bp | TGGGAGGAGATGTTTGATAGGGGAAATACATACATCTaGACATCTTGGATAAACCACTTGGCACTTACCTGC | + |
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Preference number: 6 (lower is better) Translates to: WEEMFDRGNTYI*TSWINHLALTC Trigger: GCAGGTAAGTGCCAAGTGGTTTATCCAAGATGTCAAGATGTATGTATTTCCCCTATCAAACATCTCCTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515512.1 |
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| CDS CAA 72 bp | TTGATCCTGGGTGTACCACCTCTTGTCTGTAAGACTTaGGACAAATTATGTAACTGCTCTGCATCTCAGATG | + |
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Preference number: 6 (lower is better) Translates to: LILGVPPLVCKT*DKLCNCSASQM Trigger: CATCTGAGATGCAGAGCAGTTACATAATTTGTCCAAAGTCTTACAGACAAGAGGTGGTACACCCAGGATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515512.1 |
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| CDS TCA 72 bp | GCCATTGCTTGGACTTCTCAATTTGCTCAGAATTTGTaGGAAGAGACTTCCTCAGTGACGTATTATCCTAGA | + |
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Preference number: 6 (lower is better) Translates to: AIAWTSQFAQNL*EETSSVTYYPR Trigger: TCTAGGATAATACGTCACTGAGGAAGTCTCTTCTCACAAATTCTGAGCAAATTGAGAAGTCCAAGCAATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS TCA 72 bp | AGCTACATCTTCACTTCAGCCTTGACAGTATTAAGGTaGTATTTTGGCATCTGTGTGCCATTGCTTGGACTT | + |
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Preference number: 6 (lower is better) Translates to: SYIFTSALTVLR*YFGICVPLLGL Trigger: AAGTCCAAGCAATGGCACACAGATGCCAAAATATCACCTTAATACTGTCAAGGCTGAAGTGAAGATGTAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS GCA 72 bp | GTACATTCAGCCAAACTGGTCTCTAATCCTCGGCAATaGACATGTAGACATTCAGTGGAATTTATAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: VHSAKLVSNPRQ*TCRHSVEFIER Trigger: TCTCTCTATAAATTCCACTGAATGTCTACATGTGCATTGCCGAGGATTAGAGACCAGTTTGGCTGAATGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS GCA 72 bp | GCTCGCTTTCCTCCCACAATTCGTTTCCTTCGAATGTaGATTCTGTTTTTAACTCCACAAGATAGTTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: ARFPPTIRFLRM*ILFLTPQDSLG Trigger: ACCTAAACTATCTTGTGGAGTTAAAAACAGAATGCACATTCGAAGGAAACGAATTGTGGGAGGAAAGCGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000504853.3 ENST00000512148.5 |
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| CDS CCA 72 bp | ATGAAGACATTCCAAACTCTTTTGTTGACAGTATGTTaGGAAGCTTCTCCTGTTAGTTGCACACACTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: MKTFQTLLLTVC*EASPVSCTHCS Trigger: ACTGCAGTGTGTGCAACTAACAGGAGAAGCTTCCCAACATACTGTCAACAAAAGAGTTTGGAATGTCTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000510800.1 ENST00000512148.5 |
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| CDS GCA 72 bp | TTCTCCTTCTGGGGTTCCATTATATATATTTTGGTATaGTTTATGGTGTCACACGAGTCTCATAGGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: FSFWGSIIYILV*FMVSHESHRLC Trigger: ACAGAGCCTATGAGACTCGTGTGACACCATAAAGCATACCAAAATATATATAATGGAACCCCAGAAGGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643384.1 |
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| CDS GCA 72 bp | CATATTACTTCAAGTAACTGCCAAATGTCCTTTCACTaGAGTATGCAGGGTTCTCTGACTTGCACTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: HITSSNCQMSFH*SMQGSLTCTVF Trigger: AAATACAGTGCAAGTCAGAGAACCCTGCATACTGCAGTGAAAGGACATTTGGCAGTTACTTGAAGTAATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643384.1 |
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| CDS CCA 72 bp | CTTCACTTCAGCCTTGACAGTATTAAGGTGATATTTTaGCATCTGTGTGCCATTGCTTGGACTTCTCAATTT | + |
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Preference number: 6 (lower is better) Translates to: LHFSLDSIKVIF*HLCAIAWTSQF Trigger: AAATTGAGAAGTCCAAGCAATGGCACACAGATGCCAAAATATCACCTTAATACTGTCAAGGCTGAAGTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS CAA 90 bp | GTGTCTTGGTTTGAACCTTTTTGTGTTTATCCTTCTTGGATTGCATaGAGCTTTTTGAATGTGGACAGCCATGCATTTGATCAAATGTGG | + |
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Preference number: 6 (lower is better) Translates to: VSWFEPFCVYPSWIA*SFLNVDSHAFDQMW Trigger: CCACATTTGATCAAATGCATGGCTGTCCACATTCAAAAAGCTCAATGCAATCCAAGAAGGATAAACACAAAAAGGTTCAAACCAAGACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000643384.1 |
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| CDS CCA 72 bp | ATGTTTGATAGGGGAAATACATACATCTTGACATCTTaGATAAACCACTTGGCACTTACCTGCACATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: MFDRGNTYILTS*INHLALTCTFH Trigger: ATGGAATGTGCAGGTAAGTGCCAAGTGGTTTATCCAAGATGTCAAGATGTATGTATTTCCCCTATCAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515512.1 |
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| CDS CAA 72 bp | GGAATTTATAGAGAGATCAGACAACTTAAACCTTCTTaGAGTATCAGCACCTTGTTGAAACCCAAGGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: GIYREIRQLKPS*SISTLLKPKVK Trigger: CTTGACCTTGGGTTTCAACAAGGTGCTGATACTCAAAGAAGGTTTAAGTTGTCTGATCTCTCTATAAATTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000512148.5 |
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| CDS CAA 72 bp | GTATCACCTCCAAAAGTAGGAGCTGCTATTGTTGTATaGGGCAGTAGAATTAGCTTAACCATGTTATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VSPPKVGAAIVV*GSRISLTMLSK Trigger: CTTTGATAACATGGTTAAGCTAATTCTACTGCCCAATACAACAATAGCAGCTCCTACTTTTGGAGGTGATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515512.1 |
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| CDS CAA 90 bp | TCTTACTTTCTTATTTTCTCCTTCTGGGGTTCCATTATATATATTTaGGTATGCTTTATGGTGTCACACGAGTCTCATAGGCTCTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SYFLIFSFWGSIIYI*VCFMVSHESHRLCS Trigger: TGAACAGAGCCTATGAGACTCGTGTGACACCATAAAGCATACCAAAATATATATAATGGAACCCCAGAAGGAGAAAATAAGAAAGTAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643384.1 |
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| CDS TCA 72 bp | ATCTTGGTCCACAAGTTTTACTTCAACTATTCCCTCTaGATCTGTATTTCCATGCTTCAAGGAAACACTAAA | + |
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Preference number: 6 (lower is better) Translates to: ILVHKFYFNYSL*ICISMLQGNTK Trigger: TTTAGTGTTTCCTTGAAGCATGGAAATACAGATTCAGAGGGAATAGTTGAAGTAAAACTTGTGGACCAAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394634.7 ENST00000394635.8 ENST00000510800.1 ENST00000512148.5 |
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| CDS TCA 72 bp | TCAGTGACGTATTATCCTAGAGATGATGATTTACAGTaGACTATTCTTCTAGGACATTCAATTGTTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SVTYYPRDDDLQ*TILLGHSIVPC Trigger: GCAAGGAACAATTGAATGTCCTAGAAGAATAGTTCACTGTAAATCATCATCTCTAGGATAATACGTCACTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS TCA 72 bp | AATTTGCTCAGAATTTGTGAGAAGAGACTTCCTCAGTaGCGTATTATCCTAGAGATGATGATTTACAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: NLLRICEKRLPQ*RIILEMMIYSE Trigger: TTCACTGTAAATCATCATCTCTAGGATAATACGTCACTGAGGAAGTCTCTTCTCACAAATTCTGAGCAAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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| CDS CAA 72 bp | TTTGAACCTTTTTGTGTTTATCCTTCTTGGATTGCATaGAGCTTTTTGAATGTGGACAGCCATGCATTTGAT | + |
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Preference number: 6 (lower is better) Translates to: FEPFCVYPSWIA*SFLNVDSHAFD Trigger: ATCAAATGCATGGCTGTCCACATTCAAAAAGCTCAATGCAATCCAAGAAGGATAAACACAAAAAGGTTCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000643384.1 |
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| CDS TCA 72 bp | ACTTTTTCTCCACCAGATCCTCTTGAGATGTATAAGTaGCCTTTACTGGAGTTCTTTATTTCTTCATATTAC | + |
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Preference number: 6 (lower is better) Translates to: TFSPPDPLEMYK*PLLEFFISSYY Trigger: GTAATATGAAGAAATAAAGAACTCCAGTAAAGGTCACTTATACATCTCAAGAGGATCTGGTGGAGAAAAAGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643384.1 |
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| CDS CAA 72 bp | GGAATTTATAGAGAGATCAGACAACTTAAACCTTCTTaGAGTATCAGCACCTCTGCAAATAGAATAAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GIYREIRQLKPS*SISTSANRIKE Trigger: TTCCTTTATTCTATTTGCAGAGGTGCTGATACTCAAAGAAGGTTTAAGTTGTCTGATCTCTCTATAAATTCC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504853.3 |
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