Pregenerated sensors for CFHR3 (Homo sapiens)
Ensembl gene IDs: ENSG00000116785Ensembl transcript IDs: ENST00000367425.9, ENST00000617219.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAGTTCCACATTGCTGGGAAGGCCTCACCATCATGACAGAAGGTaGATGAGTAGCAAAGGTACATCTTACATGGTGGCAGGCAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: HSSTLLGRPHHHDRR*MSSKGTSYMVAGKR Trigger: TCTCTTGCCTGCCACCATGTAAGATGTACCTTTGCTACTCATTCACCTTCTGTCATGATGGTGAGGCCTTCCCAGCAATGTGGAACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| 3UTR TCA 90 bp | GTTCCACATTGCTGGGAAGGCCTCACCATCATGACAGAAGGTGAATaGGTAGCAAAGGTACATCTTACATGGTGGCAGGCAAGAGAACTT | + |
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Preference number: 1 (lower is better) Translates to: VPHCWEGLTIMTEGE*VAKVHLTWWQAREL Trigger: AAGTTCTCTTGCCTGCCACCATGTAAGATGTACCTTTGCTACTCATTCACCTTCTGTCATGATGGTGAGGCCTTCCCAGCAATGTGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| 3UTR TCA 90 bp | AGATGTATTTACTACCATGAGTGGGGTATGGGGAAACTGCTCCCATaGTTCCATTATCTCCACCTGGCCCTACCTTTGATGCATGGTGAT | + |
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Preference number: 1 (lower is better) Translates to: RCIYYHEWGMGKLLP*FHYLHLALPLMHGD Trigger: ATCACCATGCATCAAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCCACTCATGGTAGTAAATACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| 3UTR-3UTR CCA 90 bp | CACTTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTCATAAGAGTGAGAAGTaGAAAAGTGGAAGTTGGACA | + |
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Preference number: 2 (lower is better) Translates to: HFWLCSQCSERVSKTSFLHKSEK*KSGSWT Trigger: TGTCCAACTTCCACTTTTCCACTTCTCACTCTTATG...AAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| 3UTR-3UTR GCA 90 bp | ACTTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTTGTAATGTCAGTGTTTaGCAGGAAACACTACTTTTA | + |
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Preference number: 2 (lower is better) Translates to: TSGCVPNALKGLAKPLFFCNVSV*QETLLL Trigger: TAAAAGTAGTGTTTCCTGGCAAACACTGACATTACA...AAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTAAAAATGACCCTATTTaGTTAACTGCATCTAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: TSGCVPNALKGLAKPLFFKNDPI*LTASRG Trigger: TCCTCTAGATGCAGTTAACCAAATAGGGTCATTTTT...AAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| 3UTR TCA 72 bp | TACTACCATGAGTGGGGTATGGGGAAACTGCTCCCATaGTTCCATTATCTCCACCTGGCCCTACCTTTGATG | + |
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Preference number: 3 (lower is better) Translates to: YYHEWGMGKLLP*FHYLHLALPLM Trigger: CATCAAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCCACTCATGGTAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| 3UTR TCA 72 bp | TGCTGGGAAGGCCTCACCATCATGACAGAAGGTGAATaGGTAGCAAAGGTACATCTTACATGGTGGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: CWEGLTIMTEGE*VAKVHLTWWQA Trigger: TGCCTGCCACCATGTAAGATGTACCTTTGCTACTCATTCACCTTCTGTCATGATGGTGAGGCCTTCCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| 3UTR TCA 72 bp | ACATTGCTGGGAAGGCCTCACCATCATGACAGAAGGTaGATGAGTAGCAAAGGTACATCTTACATGGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: TLLGRPHHHDRR*MSSKGTSYMVA Trigger: TGCCACCATGTAAGATGTACCTTTGCTACTCATTCACCTTCTGTCATGATGGTGAGGCCTTCCCAGCAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR GCA 90 bp | GGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTGATGCAACAGGCGTGTGCCACTaGACCTGGCTTCAGCATCCT | + |
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Preference number: 4 (lower is better) Translates to: GETAPMIPLSPPGPTFDATGVCH*TWLQHP Trigger: AGGATGCTGAAGCCAGGTGCAGTGGCACACGCCTGT...TGCATCAAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR GCA 90 bp | GGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTCTCACAGTTCCACATTaGTGGGAAGGCCTCACCATC | + |
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Preference number: 4 (lower is better) Translates to: GYGETAPMIPLSPPGPTFLTVPH*WEGLTI Trigger: GATGGTGAGGCCTTCCCAGCAATGTGGAACTGTGAG...AAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR GCA 90 bp | GGGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTTGACCTCTGATGATTaGCAGCTTGGCCTCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GVWGNCSHDSIISTWPYLLTSDD*QLGLSK Trigger: CTTTGAGAGGCCAAGCTGGCAATCATCAGAGGTCAA...AAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CCA 90 bp | GGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTGATGCAACCATGAGTGGGGTATaGGGAAACTGCTCCCATGAT | + |
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Preference number: 4 (lower is better) Translates to: GETAPMIPLSPPGPTFDATMSGV*GNCSHD Trigger: ATCATGGGAGCAGTTTCCCCATACCCCACTCATGGT...TGCATCAAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR CCA 90 bp | GGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTGATGCAACAGTTCCACATTGCTaGGAAGGCCTCACCATCATG | + |
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Preference number: 4 (lower is better) Translates to: GETAPMIPLSPPGPTFDATVPHC*EGLTIM Trigger: CATGATGGTGAGGCCTTCCCAGCAATGTGGAACTGT...TGCATCAAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR TCA 90 bp | GTGGGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCCATCATGACAGAAGGTaGATGAGTAGCAAAGGTACA | + |
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Preference number: 4 (lower is better) Translates to: VGYGETAPMIPLSPPGPTHHDRR*MSSKGT Trigger: TGTACCTTTGCTACTCATTCACCTTCTGTCATGATG...GGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR GCA 90 bp | GTGGGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTATACATGGATGTATaGATCTTGGTGGTTCCGACC | + |
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Preference number: 4 (lower is better) Translates to: VGYGETAPMIPLSPPGPTLYMDV*ILVVPT Trigger: GGTCGGAACCACCAAGATGCATACATCCATGTATAA...GGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CCA 90 bp | GGGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTATTCAAGGTGAAAATTaGGTGGGACACAGCCAAACC | + |
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Preference number: 4 (lower is better) Translates to: GVWGNCSHDSIISTWPYLIQGEN*VGHSQT Trigger: GGTTTGGCTGTGTCCCACCCAATTTTCACCTTGAAT...AAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR CCA 90 bp | GGGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTAAGGTGAAAATTGGGTaGGACACAGCCAAACCATAT | + |
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Preference number: 4 (lower is better) Translates to: GVWGNCSHDSIISTWPYLKVKIG*DTAKPY Trigger: ATATGGTTTGGCTGTGTCCCACCCAATTTTCACCTT...AAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR CCA 90 bp | GGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTGATGCAATTCAAGGTGAAAATTaGGTGGGACACAGCCAAACC | + |
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Preference number: 4 (lower is better) Translates to: GETAPMIPLSPPGPTFDAIQGEN*VGHSQT Trigger: GGTTTGGCTGTGTCCCACCCAATTTTCACCTTGAAT...TGCATCAAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR TCA 90 bp | GTGGGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTATATAATTCAAGGTaGAAATTGGGTGGGACACAG | + |
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Preference number: 4 (lower is better) Translates to: VGYGETAPMIPLSPPGPTLYNSR*KLGGTQ Trigger: CTGTGTCCCACCCAATTTTCACCTTGAATTATATAA...GGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR GCA 90 bp | ACTTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTTTGCCCAGGCTGGAGTaGAGTGGCACTATCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TSGCVPNALKGLAKPLFFLPRLE*SGTILA Trigger: AGCCAAGATAGTGCCACTGCACTCCAGCCTGGGCAA...AAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CCA 90 bp | GGGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTCATAAGAGTGAGAAGTaGAAAAGTGGAAGTTGGACA | + |
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Preference number: 4 (lower is better) Translates to: GVWGNCSHDSIISTWPYLHKSEK*KSGSWT Trigger: TGTCCAACTTCCACTTTTCCACTTCTCACTCTTATG...AAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CCA 90 bp | GGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTAAGGTGAAAATTGGGTaGGACACAGCCAAACCATAT | + |
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Preference number: 4 (lower is better) Translates to: GYGETAPMIPLSPPGPTFKVKIG*DTAKPY Trigger: ATATGGTTTGGCTGTGTCCCACCCAATTTTCACCTT...AAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR CCA 90 bp | GGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTGATGCAAAGGTACATCTTACATaGTGGCAGGCAAGAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: GETAPMIPLSPPGPTFDAKVHLT*WQAREL Trigger: AAGTTCTCTTGCCTGCCACCATGTAAGATGTACCTT...TGCATCAAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR TCA 90 bp | TTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTTTCCCCACTGGTTAAAGTaGTTCTCCCACCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FWLCSQCSERVSKTSFLFPHWLK*FSHLSL Trigger: GAGGCTGAGGTGGGAGAATCACTTTAACCAGTGGGG...AAAAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR TCA 90 bp | AGTGGGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACTTATATAATTCAAGGTaGAAATTGGGTGGGACACAG | + |
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Preference number: 4 (lower is better) Translates to: SGVWGNCSHDSIISTWPYLYNSR*KLGGTQ Trigger: CTGTGTCCCACCCAATTTTCACCTTGAATTATATAA...GTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR GCA 90 bp | GTGGGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTGTAATGTCAGTGTTTaGCAGGAAACACTACTTTTA | + |
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Preference number: 4 (lower is better) Translates to: VGYGETAPMIPLSPPGPTCNVSV*QETLLL Trigger: TAAAAGTAGTGTTTCCTGGCAAACACTGACATTACA...GGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR GCA 90 bp | ACTTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTCTCACAGTTCCACATTaGTGGGAAGGCCTCACCATC | + |
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Preference number: 4 (lower is better) Translates to: TSGCVPNALKGLAKPLFFLTVPH*WEGLTI Trigger: GATGGTGAGGCCTTCCCAGCAATGTGGAACTGTGAG...AAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CCA 90 bp | ACTTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTGTGTGCCACTGCACCTaGCTTCAGCATCCTAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: TSGCVPNALKGLAKPLFFVCHCT*LQHPKV Trigger: CACTTTAGGATGCTGAAGCCAGGTGCAGTGGCACAC...AAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CCA 90 bp | CACTTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTACCATGAGTGGGGTATaGGGAAACTGCTCCCATGAT | + |
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Preference number: 4 (lower is better) Translates to: HFWLCSQCSERVSKTSFLTMSGV*GNCSHD Trigger: ATCATGGGAGCAGTTTCCCCATACCCCACTCATGGT...AAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR TCA 90 bp | ACTTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTCTGGTCTTGAACTTTTaGCCTCTGATGATTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TSGCVPNALKGLAKPLFFLVLNF*PLMIAS Trigger: GCTGGCAATCATCAGAGGTCAAAAGTTCAAGACCAG...AAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CCA 90 bp | GGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTGATGCAAAAAATGACCCTATTTaGTTAACTGCATCTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: GETAPMIPLSPPGPTFDAKNDPI*LTASRG Trigger: TCCTCTAGATGCAGTTAACCAAATAGGGTCATTTTT...TGCATCAAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CCA 90 bp | TTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTTTACAGTTCCACATTGCTaGGAAGGCCTCACCATCATG | + |
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Preference number: 4 (lower is better) Translates to: FWLCSQCSERVSKTSFLFTVPHC*EGLTIM Trigger: CATGATGGTGAGGCCTTCCCAGCAATGTGGAACTGT...AAAAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CCA 90 bp | ACTTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTCATTTAATGCACTTCTaGCTGTGTTCCCAATGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TSGCVPNALKGLAKPLFFHLMHF*LCSQCS Trigger: AGAGCATTGGGAACACAGCCAGAAGTGCATTAAATG...AAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR TCA 90 bp | ACTTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTAGGCCCACACTTTTCTaGAGAATTAATGCAAATTGG | + |
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Preference number: 4 (lower is better) Translates to: TSGCVPNALKGLAKPLFFRPTLF*RINANW Trigger: CCAATTTGCATTAATTCTTCAGAAAAGTGTGGGCCT...AAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR TCA 90 bp | TTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTTTCATCATGACAGAAGGTaGATGAGTAGCAAAGGTACA | + |
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Preference number: 4 (lower is better) Translates to: FWLCSQCSERVSKTSFLFHHDRR*MSSKGT Trigger: TGTACCTTTGCTACTCATTCACCTTCTGTCATGATG...AAAAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CCA 90 bp | ACTTCTGGCTGTGTTCCCAATGCTCTGAAAGGGTTAGCAAAACCTCTTTTCTTTTTCAGTTATTATACATaGATGTATGCATCTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TSGCVPNALKGLAKPLFFFSYYT*MYASWW Trigger: CCACCAAGATGCATACATCCATGTATAATAACTGAA...AAAGAAAAGAGGTTTTGCTAACCCTTTCAGAGCATTGGGAACACAGCCAGAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CAA 90 bp | GGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTGATGCACTGATGATTGCCAGCTaGGCCTCTCAAAGTGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: GETAPMIPLSPPGPTFDALMIAS*ASQSAR Trigger: CCTAGCACTTTGAGAGGCCAAGCTGGCAATCATCAG...TGCATCAAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367425.9 |
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| CDS-3UTR CAA 90 bp | GGGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTGGCAGGCAAGAGAACTaGTCCAGGGGAACTTTCATT | + |
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Preference number: 5 (lower is better) Translates to: GVWGNCSHDSIISTWPYLGRQEN*SRGTFI Trigger: AATGAAAGTTCCCCTGGACAAGTTCTCTTGCCTGCC...AAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR CAA 90 bp | GGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTGATGCAACTCACAGTTCCACATaGCTGGGAAGGCCTCACCAT | + |
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Preference number: 5 (lower is better) Translates to: GETAPMIPLSPPGPTFDATHSST*LGRPHH Trigger: ATGGTGAGGCCTTCCCAGCAATGTGGAACTGTGAGT...TGCATCAAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR CAA 90 bp | GGGTATGGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTATCACAAGGTTTCACTaGTCCATTAGCACAGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: GYGETAPMIPLSPPGPTFITRFH*SISTGN Trigger: GTTTCCTGTGCTAATGGACAAGTGAAACCTTGTGAT...AAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCCATACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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| CDS-3UTR CAA 90 bp | GGGGAAACTGCTCCCATGATTCCATTATCTCCACCTGGCCCTACCTTTGATGCAATCACAAGGTTTCACTaGTCCATTAGCACAGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: GETAPMIPLSPPGPTFDAITRFH*SISTGN Trigger: GTTTCCTGTGCTAATGGACAAGTGAAACCTTGTGAT...TGCATCAAAGGTAGGGCCAGGTGGAGATAATGGAATCATGGGAGCAGTTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367425.9 ENST00000617219.1 |
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