RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP94 (Homo sapiens)

Ensembl gene IDs: ENSG00000118307

Ensembl transcript IDs: ENST00000320267.13, ENST00000354189.9, ENST00000395987.8, ENST00000395990.6, ENST00000545133.5, ENST00000554533.5, ENST00000555240.1, ENST00000556006.6, ENST00000556467.5, ENST00000556547.5, ENST00000557684.6, ENST00000674567.1, ENST00000676236.1

Found 509 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCAATCTGGTAGAGAGCAGCATGTGGCACACAGAGTTGACAAACTaGCAGTTGGAACTCCTGACTTTCTCCATTGCTTCCTCAGAAGCA +
Preference number: 1 (lower is better)
Translates to: SNLVESSMWHTELTN*QLELLTFSIASSEA
Trigger: TGCTTCTGAGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGTGTGCCACATGCTGCTCTCTACCAGATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
3UTR CCA 90 bp CCCTTCACTGGTTTACACTGTGGAGGAAGCTCCAAAATATCCAAGTaGTATACTCCACCCAGAGTTGTGAACTGGCATAAATCCACCACA +
Preference number: 1 (lower is better)
Translates to: PFTGLHCGGSSKISK*YTPPRVVNWHKSTT
Trigger: TGTGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAGTATACCACTTGGATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR TCA 90 bp GAGGAAGCTCCAAAATATCCAAGTGGTATACTCCACCCAGAGTTGTaGACTGGCATAAATCCACCACATTGTCTTCAAAGAAATCTGGCT +
Preference number: 1 (lower is better)
Translates to: EEAPKYPSGILHPEL*TGINPPHCLQRNLA
Trigger: AGCCAGATTTCTTTGAAGACAATGTGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAGTATACCACTTGGATATTTTGGAGCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR CCA 90 bp CTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTaGAGGTTAGGAGTAGCTGAGCAATCTGGTAGAGAGCAGCATGTG +
Preference number: 1 (lower is better)
Translates to: LSPCLVLHTYNTVCK*RLGVAEQSGREQHV
Trigger: CACATGCTGCTCTCTACCAGATTGCTCAGCTACTCCTAACCTCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
3UTR CCA 90 bp TTTGAGTATTTCCACAATCATCCATCCCTTCACTGGTTTACACTGTaGAGGAAGCTCCAAAATATCCAAGTGGTATACTCCACCCAGAGT +
Preference number: 1 (lower is better)
Translates to: FEYFHNHPSLHWFTL*RKLQNIQVVYSTQS
Trigger: ACTCTGGGTGGAGTATACCACTTGGATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTGAAGGGATGGATGATTGTGGAAATACTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR TCA 90 bp TTTCTCTTTCCACAAACTAATAAACGTGTTCATTTCTTGGGCTACTaGAGGATCAGGACTCCCATCACATTGAATGTAGTGCTTCCACTG +
Preference number: 1 (lower is better)
Translates to: FLFPQTNKRVHFLGY*RIRTPITLNVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTTTATTAGTTTGTGGAAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000556467.5
3UTR CCA 90 bp AGCTCCAAAATATCCAAGTGGTATACTCCACCCAGAGTTGTGAACTaGCATAAATCCACCACATTGTCTTCAAAGAAATCTGGCTTTTCA +
Preference number: 1 (lower is better)
Translates to: SSKISKWYTPPRVVN*HKSTTLSSKKSGFS
Trigger: TGAAAAGCCAGATTTCTTTGAAGACAATGTGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAGTATACCACTTGGATATTTTGGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR TCA 90 bp CTAGCTTGTTTGAGAAGTATTTCTGTGGCTACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGTAGTATTGATTCTTGGTACTGTATT +
Preference number: 1 (lower is better)
Translates to: LACLRSISVATPNLR*RSSCSCSIDSWYCI
Trigger: AATACAGTACCAAGAATCAATACTACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGTAGCCACAGAAATACTTCTCAAACAAGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR-3UTR TCA 90 bp AAACTAATAAACGTGTTCATTTCTTGGGCTACTGAAGGATCAGGACTCCCATCACATTTCTTGGGCTACTaGAGGATCAGGACTCCCATC +
Preference number: 2 (lower is better)
Translates to: KLINVFISWATEGSGLPSHFLGY*RIRTPI
Trigger: GATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATG...TGATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTTTATTAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000556467.5
3UTR-3UTR CCA 90 bp CCATCCCTTCACTGGTTTACACTGTGGAGGAAGCTCCAAAATATCCAAGTGGTAAACACTTCTGTGCCTTaGATTCTTCTTGAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: PSLHWFTLWRKLQNIQVVNTSVP*ILLEVC
Trigger: GCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTT...TACCACTTGGATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTGAAGGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR-3UTR TCA 90 bp CCACCCAGAGTTGTGAACTGGCATAAATCCACCACATTGTCTTCAAAGAAATCTACAGAGTTGACAAACTaGCAGTTGGAACTCCTGACT +
Preference number: 2 (lower is better)
Translates to: PPRVVNWHKSTTLSSKKSTELTN*QLELLT
Trigger: AGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGT...AGATTTCTTTGAAGACAATGTGGTGGATTTATGCCAGTTCACAACTCTGGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR-3UTR TCA 90 bp GGGAAAGCATTTTCTGTCTCAAACTCTTCTGTAGTTTCCGGAGGATATGTGTATGCCTTGGATTCTTCTTaGGGTTTGCCCACACATACA +
Preference number: 2 (lower is better)
Translates to: GKAFSVSNSSVVSGGYVYALDSS*GLPTHT
Trigger: TGTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGC...ATACACATATCCTCCGGAAACTACAGAAGAGTTTGAGACAGAAAATGCTTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR CAA 90 bp TGGTATACTCCACCCAGAGTTGTGAACTGGCATAAATCCACCACATaGTCTTCAAAGAAATCTGGCTTTTCAGAAGAATTCTCTACCAGC +
Preference number: 2 (lower is better)
Translates to: WYTPPRVVNWHKSTT*SSKKSGFSEEFSTS
Trigger: GCTGGTAGAGAATTCTTCTGAAAAGCCAGATTTCTTTGAAGACAATGTGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAGTATACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR-3UTR TCA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATGACAGTTGGAACTCCTaGCTTTCTCCATTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHDSWNS*LSPLLP
Trigger: AGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTC...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
3UTR-3UTR CCA 90 bp ATCAGGACTCCCATCACATTGAATGTAGTGCTTCCACTGAGAAAGCAATTTAGTAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 2 (lower is better)
Translates to: IRTPITLNVVLPLRKQFSNVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...ACTAAATTGCTTTCTCAGTGGAAGCACTACATTCAATGTGATGGGAGTCCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000556467.5
3UTR CAA 90 bp CATGATCATAGTGGGTATGCAGGAGTCGTACAGCAATGTCACTTGTaGCTAATATCCTTGGAATCTCAAATCCAATTTGTGTTTCAGAGA +
Preference number: 2 (lower is better)
Translates to: HDHSGYAGVVQQCHL*LISLESQIQFVFQR
Trigger: TCTCTGAAACACAAATTGGATTTGAGATTCCAAGGATATTAGCAACAAGTGACATTGCTGTACGACTCCTGCATACCCACTATGATCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR CAA 90 bp CACCACTTAAATACGACTTTTGTAGAATTACATAGTAGGTTCCACTaGCTCCAACCAAATGCAAAAGCAGAACTTAGTAGGGCCATCTGT +
Preference number: 2 (lower is better)
Translates to: HHLNTTFVELHSRFH*LQPNAKAELSRAIC
Trigger: ACAGATGGCCCTACTAAGTTCTGCTTTTGCATTTGGTTGGAGCAAGTGGAACCTACTATGTAATTCTACAAAAGTCGTATTTAAGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR-3UTR GCA 90 bp AAACTAATAAACGTGTTCATTTCTTGGGCTACTGAAGGATCAGGACTCCCATCACTGTTTCAATTTCTCTaGTTCAGGAAAACACCTCTC +
Preference number: 2 (lower is better)
Translates to: KLINVFISWATEGSGLPSLFQFL*FRKTPL
Trigger: GAGAGGTGTTTTCCTGAAGCAGAGAAATTGAAACAG...TGATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTTTATTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000556467.5
3UTR CAA 90 bp AAACATGATCATAGTGGGTATGCAGGAGTCGTACAGCAATGTCACTaGTTGCTAATATCCTTGGAATCTCAAATCCAATTTGTGTTTCAG +
Preference number: 2 (lower is better)
Translates to: KHDHSGYAGVVQQCH*LLISLESQIQFVFQ
Trigger: CTGAAACACAAATTGGATTTGAGATTCCAAGGATATTAGCAACAAGTGACATTGCTGTACGACTCCTGCATACCCACTATGATCATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR-3UTR CCA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTAATACAGTTTGTAAGTaGAGGTTAGGAGTAGCTGAG +
Preference number: 2 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVNTVCK*RLGVAE
Trigger: CTCAGCTACTCCTAACCTCCACTTACAAACTGTATT...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
3UTR CAA 90 bp TCGACCTCCTTGCTGATTGCTTTTTCTACATTCTTAACATCATCTTaGACAAGCTCAGTTACTGCAGAAGTGTATTCTTTTGATGGTGTT +
Preference number: 2 (lower is better)
Translates to: STSLLIAFSTFLTSS*TSSVTAEVYSFDGV
Trigger: AACACCATCAAAAGAATACACTTCTGCAGTAACTGAGCTTGTCAAAGATGATGTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR-3UTR CCA 90 bp TTCACATTTTATGGCTTCAGATTCTTCCTCAGCAGAACTCATTTTCACTTCAATAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 2 (lower is better)
Translates to: FTFYGFRFFLSRTHFHFNNVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...ATTGAAGTGAAAATGAGTTCTGCTGAGGAAGAATCTGAAGCCATAAAATGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR-3UTR CCA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGGTCTTTCACCATGCTTaGTTCTTCATACTTACAATA +
Preference number: 2 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLVFHHA*FFILTI
Trigger: TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGAC...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
3UTR-3UTR CCA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGGTCTTCAAAGAAATCTaGCTTTTCAGAAGAATTCTC +
Preference number: 2 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLVFKEI*LFRRIL
Trigger: GAGAATTCTTCTGAAAAGCCAGATTTCTTTGAAGAC...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR TCA 72 bp GTAGAGAGCAGCATGTGGCACACAGAGTTGACAAACTaGCAGTTGGAACTCCTGACTTTCTCCATTGCTTCC +
Preference number: 3 (lower is better)
Translates to: VESSMWHTELTN*QLELLTFSIAS
Trigger: GGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGTGTGCCACATGCTGCTCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
3UTR-3UTR CAA 90 bp CCATCCCTTCACTGGTTTACACTGTGGAGGAAGCTCCAAAATATCCAAGTGGTATCTTCTTCGACCTCCTaGCTGATTGCTTTTTCTACA +
Preference number: 3 (lower is better)
Translates to: PSLHWFTLWRKLQNIQVVSSSTS*LIAFST
Trigger: TGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGA...TACCACTTGGATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTGAAGGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR CCA 72 bp TTCCACAATCATCCATCCCTTCACTGGTTTACACTGTaGAGGAAGCTCCAAAATATCCAAGTGGTATACTCC +
Preference number: 3 (lower is better)
Translates to: FHNHPSLHWFTL*RKLQNIQVVYS
Trigger: GGAGTATACCACTTGGATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTGAAGGGATGGATGATTGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR-3UTR CAA 90 bp ATCAGGACTCCCATCACATTGAATGTAGTGCTTCCACTGAGAAAGCAATTTAGTAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 3 (lower is better)
Translates to: IRTPITLNVVLPLRKQFSRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...ACTAAATTGCTTTCTCAGTGGAAGCACTACATTCAATGTGATGGGAGTCCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000556467.5
3UTR GCA 72 bp GACAAACTGACAGTTGGAACTCCTGACTTTCTCCATTaGTTCCTCAGAAGCAAAATCCTTCACCATGTGATA +
Preference number: 3 (lower is better)
Translates to: DKLTVGTPDFLH*FLRSKILHHVI
Trigger: TATCACATGGTGAAGGATTTTGCTTCTGAGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTCAGTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
3UTR-3UTR CAA 90 bp CATGTGGCACACAGAGTTGACAAACTGACAGTTGGAACTCCTGACTTTCTCCATTGTCTTTCACCATGCTaGGTTCTTCATACTTACAAT +
Preference number: 3 (lower is better)
Translates to: HVAHRVDKLTVGTPDFLHCLSPC*VLHTYN
Trigger: ATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACA...ATGGAGAAAGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGTGTGCCACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
3UTR-3UTR CAA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 3 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR TCA 72 bp CCACAAACTAATAAACGTGTTCATTTCTTGGGCTACTaGAGGATCAGGACTCCCATCACATTGAATGTAGTG +
Preference number: 3 (lower is better)
Translates to: PQTNKRVHFLGY*RIRTPITLNVV
Trigger: CACTACATTCAATGTGATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTTTATTAGTTTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000556467.5
3UTR TCA 72 bp CCAAAATATCCAAGTGGTATACTCCACCCAGAGTTGTaGACTGGCATAAATCCACCACATTGTCTTCAAAGA +
Preference number: 3 (lower is better)
Translates to: PKYPSGILHPEL*TGINPPHCLQR
Trigger: TCTTTGAAGACAATGTGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAGTATACCACTTGGATATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR CCA 72 bp TGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTaGAGGTTAGGAGTAGCTGAGCAATCTGGTAGAGAG +
Preference number: 3 (lower is better)
Translates to: CLVLHTYNTVCK*RLGVAEQSGRE
Trigger: CTCTCTACCAGATTGCTCAGCTACTCCTAACCTCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
3UTR-3UTR CAA 90 bp ATCAGGACTCCCATCACATTGAATGTAGTGCTTCCACTGAGAAAGCAATTTAGTTCCTTTCTAGATCTTTaGCTTCAAGTCGATGCCATT +
Preference number: 3 (lower is better)
Translates to: IRTPITLNVVLPLRKQFSSFLDL*LQVDAI
Trigger: AATGGCATCGACTTGAAGCAAAAGATCTAGAAAGGA...ACTAAATTGCTTTCTCAGTGGAAGCACTACATTCAATGTGATGGGAGTCCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556467.5
3UTR TCA 72 bp TTGAGAAGTATTTCTGTGGCTACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGTAGTATTGATTCTTGG +
Preference number: 3 (lower is better)
Translates to: LRSISVATPNLR*RSSCSCSIDSW
Trigger: CCAAGAATCAATACTACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGTAGCCACAGAAATACTTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR CCA 72 bp ATATCCAAGTGGTATACTCCACCCAGAGTTGTGAACTaGCATAAATCCACCACATTGTCTTCAAAGAAATCT +
Preference number: 3 (lower is better)
Translates to: ISKWYTPPRVVN*HKSTTLSSKKS
Trigger: AGATTTCTTTGAAGACAATGTGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAGTATACCACTTGGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR CCA 72 bp TACATTCTCATGAACCTCAAGTGTGACCTCTATAGGTaGGAAAGCATTTTCTGTCTCAAACTCTTCTGTAGT +
Preference number: 3 (lower is better)
Translates to: YILMNLKCDLYR*ESIFCLKLFCS
Trigger: ACTACAGAAGAGTTTGAGACAGAAAATGCTTTCCCACCTATAGAGGTCACACTTGAGGTTCATGAGAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR-3UTR CAA 90 bp AAACTAATAAACGTGTTCATTTCTTGGGCTACTGAAGGATCAGGACTCCCATCACCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 3 (lower is better)
Translates to: KLINVFISWATEGSGLPSPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...TGATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTTTATTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000556467.5
3UTR-3UTR CAA 90 bp GGGAAAGCATTTTCTGTCTCAAACTCTTCTGTAGTTTCCGGAGGATATGTGTATCACTTCAATATCACCTaGTTCCTCCTCAACTTTTAT +
Preference number: 3 (lower is better)
Translates to: GKAFSVSNSSVVSGGYVYHFNIT*FLLNFY
Trigger: ATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTG...ATACACATATCCTCCGGAAACTACAGAAGAGTTTGAGACAGAAAATGCTTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR-3UTR CAA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTTGTCTTTCACCATGCTaGGTTCTTCATACTTACAAT +
Preference number: 3 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVCLSPC*VLHTYN
Trigger: ATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACA...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
3UTR-3UTR CAA 90 bp GCCAAAGTACTAGCTTGTTTGAGAAGTATTTCTGTGGCTACACCGAATTTAAGACCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 3 (lower is better)
Translates to: AKVLACLRSISVATPNLRPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...TCTTAAATTCGGTGTAGCCACAGAAATACTTCTCAAACAAGCTAGTACTTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR GCA 72 bp TCTAACACTTCTGTGCCTTGGATTCTTCTTGAGGTTTaGCCACACATACAGAGTAACATTTTCATCTTTAAT +
Preference number: 3 (lower is better)
Translates to: SNTSVPWILLEV*PHIQSNIFIFN
Trigger: ATTAAAGATGAAAATGTTACTCTGTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR CCA 72 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTaGTTCTTCATACTTACAATACAGTTTGTAAGTGGA +
Preference number: 3 (lower is better)
Translates to: HCVAEIPVFHHA*FFILTIQFVSG
Trigger: TCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
3UTR-3UTR CAA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTGTCTTTCACCATGCTaGGTTCTTCATACTTACAAT +
Preference number: 3 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLCLSPC*VLHTYN
Trigger: ATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACA...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
3UTR-3UTR CAA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGAAAGTACTAGCTTGTTaGAGAAGTATTTCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLKVLAC*RSISVA
Trigger: AGCCACAGAAATACTTCTCAAACAAGCTAGTACTTT...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR GCA 72 bp ATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATaGTTGGTTCTTCATACTTACAATACAGTTTGTAAG +
Preference number: 3 (lower is better)
Translates to: ITLCCRNTCLSP*LVLHTYNTVCK
Trigger: CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATAAGGAAAGCCATTGCTaGGAAGAGGGCCGACCCACC +
Preference number: 4 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHKESHC*EEGRPT
Trigger: GGTGGGTCGGCCCTCTTCTCAGCAATGGCTTTCCTT...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354189.9
CDS-3UTR GCA 90 bp CCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGAGCCCCTCCACCTGTCTaGCTCATTTGCCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: PVFHHAWFFILTIQFVSGAPPPV*LICLAH
Trigger: GTGAGCAAGGCAAATGAGGCAGACAGGTGGAGGGGC...TCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354189.9
CDS-3UTR TCA 90 bp AATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTCTCCACCCAGAGTTGTaGACTGGCATAAATCCACCA +
Preference number: 4 (lower is better)
Translates to: NQGNRAKGVQAECYKSFFLHPEL*TGINPP
Trigger: TGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAG...AAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR GCA 90 bp TCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTAGAGTCAAGCTCCACTaGAGTAGTCCGCAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: SFTHYIVLQKYLSFTMLGRVKLH*SSPQSR
Trigger: CCGACTCTGCGGACTACTGCAGTGGAGCTTGACTCT...ACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp CCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGAAGAGTCAAGCTCCACTaGAGTAGTCCGCAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: PVFHHAWFFILTIQFVSGRVKLH*SSPQSR
Trigger: CCGACTCTGCGGACTACTGCAGTGGAGCTTGACTCT...TCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CCA 90 bp ATCAGGACTCCCATCACATTGAATGTAGTGCTTCCACTGAGAAAGCAATTTAGTGGAGCAGAAATTGTGTaGACAAACGCTCCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: IRTPITLNVVLPLRKQFSGAEIV*TNAPGL
Trigger: CAACCCGGGAGCGTTTGTCCACACAATTTCTGCTCC...ACTAAATTGCTTTCTCAGTGGAAGCACTACATTCAATGTGATGGGAGTCCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000556467.5
CDS-3UTR CCA 90 bp GTTTGTAAGTGGAGGTTAGGAGTAGCTGAGCAATCTGGTAGAGAGCAGCATGTGCTCTTTCTTGTTGTTTaGACTCTTCTTCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: VCKWRLGVAEQSGREQHVLFLVV*TLLRPP
Trigger: AGGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAG...CACATGCTGCTCTCTACCAGATTGCTCAGCTACTCCTAACCTCCACTTACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
CDS-3UTR TCA 90 bp CATGTTAATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: HVNMSILNQGNRAKGVQATPNLR*RSSCSC
Trigger: ACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGT...AGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATTAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR TCA 90 bp GTATGCAGGAGTCGTACAGCAATGTCACTTGTTGCTAATATCCTTGGAATCTCAGCCTTGGATTCTTCTTaGGGTTTGCCCACACATACA +
Preference number: 4 (lower is better)
Translates to: VCRSRTAMSLVANILGISALDSS*GLPTHT
Trigger: TGTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGC...TGAGATTCCAAGGATATTAGCAACAAGTGACATTGCTGTACGACTCCTGCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR TCA 90 bp CAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTTGGCAAAGGTGTCCAGGCTaGATGTTACAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QGNRAKGVQAECYKSFFWQRCPG*MLQVFL
Trigger: AAGAAAGACTTGTAACATTCAGCCTGGACACCTTTG...CCAAAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR GCA 90 bp TACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTAAGAGTCAAGCTCCACTaGAGTAGTCCGCAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: YIVLQKYLSFTMLGSSYLRVKLH*SSPQSR
Trigger: CCGACTCTGCGGACTACTGCAGTGGAGCTTGACTCT...TAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTAGAGTCAAGCTCCACTaGAGTAGTCCGCAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILRVKLH*SSPQSR
Trigger: CCGACTCTGCGGACTACTGCAGTGGAGCTTGACTCT...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CCA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAGGAGCAGAAATTGTGTaGACAAACGCTCCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTGAEIV*TNAPGL
Trigger: CAACCCGGGAGCGTTTGTCCACACAATTTCTGCTCC...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000554533.5
CDS-3UTR CCA 90 bp CATGTGGCACACAGAGTTGACAAACTGACAGTTGGAACTCCTGACTTTCTCCATAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: HVAHRVDKLTVGTPDFLHNVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...ATGGAGAAAGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGTGTGCCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
CDS-3UTR CCA 90 bp CATGTGGCACACAGAGTTGACAAACTGACAGTTGGAACTCCTGACTTTCTCCATCTCTTTCTTGTTGTTTaGACTCTTCTTCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: HVAHRVDKLTVGTPDFLHLFLVV*TLLRPP
Trigger: AGGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAG...ATGGAGAAAGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGTGTGCCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
CDS-3UTR CCA 90 bp AGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGCTCTTTCTTGTTGTTTaGACTCTTCTTCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: SILNQGNRAKGVQAECYKLFLVV*TLLRPP
Trigger: AGGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAG...CTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CCA 90 bp AATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTCCCAGAGTTGTGAACTaGCATAAATCCACCACATTG +
Preference number: 4 (lower is better)
Translates to: NMSILNQGNRAKGVQAECPRVVN*HKSTTL
Trigger: CAATGTGGTGGATTTATGCCAGTTCACAACTCTGGG...ACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CCA 90 bp AATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTCATCCATCCCTTCACTaGTTTACACTGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: NQGNRAKGVQAECYKSFFHPSLH*FTLWRK
Trigger: CTTCCTCCACAGTGTAAACCAGTGAAGGGATGGATG...AAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CCA 90 bp TTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTGTGAAGCAGAATCAGTaGTCGCCCCTCCACCTGTCT +
Preference number: 4 (lower is better)
Translates to: LQKYLSFTMLGSSYLQYSVKQNQ*SPLHLS
Trigger: AGACAGGTGGAGGGGCGACCACTGATTCTGCTTCAC...ACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354189.9
CDS-3UTR TCA 90 bp CCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGACATTTCTTGGGCTACTaGAGGATCAGGACTCCCATC +
Preference number: 4 (lower is better)
Translates to: PVFHHAWFFILTIQFVSGHFLGY*RIRTPI
Trigger: GATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATG...TCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp AATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTCTTCGACCTCCTTGCTaGTTGCTTTTTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: NMSILNQGNRAKGVQAECLRPPC*LLFLHS
Trigger: AGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAG...ACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR TCA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACACTCCACCCAGAGTTGTaGACTGGCATAAATCCACCA +
Preference number: 4 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTLHPEL*TGINPP
Trigger: TGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAG...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp CAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTTGGAAGATTACATTCTCATaGACCTCAAGTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: QGNRAKGVQAECYKSFFWKITFS*TSSVTS
Trigger: AGAGGTCACACTTGAGGTTCATGAGAATGTAATCTT...CCAAAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR GCA 90 bp ATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGAGAGTCAAGCTCCACTaGAGTAGTCCGCAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: MYSFTHYIVLQKYLSFTMRVKLH*SSPQSR
Trigger: CCGACTCTGCGGACTACTGCAGTGGAGCTTGACTCT...CATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp CAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTTGGCTGTTTCAATTTCTCTaGTTCAGGAAAACACCTCTC +
Preference number: 4 (lower is better)
Translates to: QGNRAKGVQAECYKSFFWLFQFL*FRKTPL
Trigger: GAGAGGTGTTTTCCTGAAGCAGAGAAATTGAAACAG...CCAAAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CCA 90 bp TGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTGGAGCAGAAATTGTGTaGACAAACGCTCCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: CRNTCLSPCLVLHTYNTVGAEIV*TNAPGL
Trigger: CAACCCGGGAGCGTTTGTCCACACAATTTCTGCTCC...AACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000554533.5
CDS-3UTR CCA 90 bp AATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: NMSILNQGNRAKGVQAECNVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...ACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CCA 90 bp CATGTTAATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTAACACTTCTGTGCCTTaGATTCTTCTTGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: HVNMSILNQGNRAKGVQANTSVP*ILLEVC
Trigger: GCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTT...AGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATTAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CCA 90 bp ATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTGTGACCTCTATAGGTaGGAAAGCATTTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ILNQGNRAKGVQAECYKSCDLYR*ESIFCL
Trigger: GAGACAGAAAATGCTTTCCCACCTATAGAGGTCACA...AGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR TCA 90 bp TTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTCATTTCTTGGGCTACTaGAGGATCAGGACTCCCATC +
Preference number: 4 (lower is better)
Translates to: LQKYLSFTMLGSSYLQYSHFLGY*RIRTPI
Trigger: GATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATG...ACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp GTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTCATTTCTTGGGCTACTaGAGGATCAGGACTCCCATC +
Preference number: 4 (lower is better)
Translates to: VFIHSLHCVAEIPVFHHAHFLGY*RIRTPI
Trigger: GATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATG...AGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFTPNLR*RSSCSC
Trigger: ACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGT...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCGCCTTGGATTCTTCTTaGGGTTTGCCCACACATACA +
Preference number: 4 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFALDSS*GLPTHT
Trigger: TGTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGC...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR TCA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACACTCCACCCAGAGTTGTaGACTGGCATAAATCCACCA +
Preference number: 4 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTLHPEL*TGINPP
Trigger: TGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAG...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACTCCACCCAGAGTTGTaGACTGGCATAAATCCACCA +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTILHPEL*TGINPP
Trigger: TGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAG...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGCTCCACCCAGAGTTGTaGACTGGCATAAATCCACCA +
Preference number: 4 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLLHPEL*TGINPP
Trigger: TGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAG...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp CAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTTGGTCTGTAATCCTTCTTTaGGTATTTCCACAATCATCC +
Preference number: 4 (lower is better)
Translates to: QGNRAKGVQAECYKSFFWSVILL*VFPQSS
Trigger: GGATGATTGTGGAAATACTCAAAGAAGGATTACAGA...CCAAAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR TCA 90 bp ATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTAAGATTACATTCTCATaGACCTCAAGTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: ILNQGNRAKGVQAECYKSKITFS*TSSVTS
Trigger: AGAGGTCACACTTGAGGTTCATGAGAATGTAATCTT...AGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR TCA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCGACAGTTGGAACTCCTaGCTTTCTCCATTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFDSWNS*LSPLLP
Trigger: AGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTC...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACGACAGTTGGAACTCCTaGCTTTCTCCATTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYDSWNS*LSPLLP
Trigger: AGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTC...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTGACAGTTGGAACTCCTaGCTTTCTCCATTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVDSWNS*LSPLLP
Trigger: AGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTC...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp ACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACGACAGTTGGAACTCCTaGCTTTCTCCATTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TLCCRNTCLSPCLVLHTYDSWNS*LSPLLP
Trigger: AGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTC...GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCACAGAGTTGACAAACTaGCAGTTGGAACTCCTGACT +
Preference number: 4 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFTELTN*QLELLT
Trigger: AGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGT...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp ACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACCAGATCTTTGGCCACTaGAGCCTGTTTGTGATGACA +
Preference number: 4 (lower is better)
Translates to: TLCCRNTCLSPCLVLHTYQIFGH*SLFVMT
Trigger: TGTCATCACAAACAGGCTTCAGTGGCCAAAGATCTG...GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395990.6
CDS-3UTR GCA 90 bp CATGTTAATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTATTCTTCTTGAGGTTTaGCCACACATACAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: HVNMSILNQGNRAKGVQAILLEV*PHIQSN
Trigger: GTTACTCTGTATGTGTGGGCAAACCTCAAGAAGAAT...AGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATTAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR GCA 90 bp ATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTAATCTAACACTTCTGTaGCTTGGATTCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: ILNQGNRAKGVQAECYKSNLTLL*LGFFLR
Trigger: CCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGATT...AGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR GCA 90 bp CAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTTGGGACCTCCTTGCTGATTaGTTTTTCTACATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: QGNRAKGVQAECYKSFFWDLLAD*FFYILN
Trigger: GTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTC...CCAAAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CCA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCGGAGCAGAAATTGTGTaGACAAACGCTCCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTGAEIV*TNAPGL
Trigger: CAACCCGGGAGCGTTTGTCCACACAATTTCTGCTCC...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000554533.5
CDS-3UTR CCA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGGGAGCAGAAATTGTGTaGACAAACGCTCCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKGAEIV*TNAPGL
Trigger: CAACCCGGGAGCGTTTGTCCACACAATTTCTGCTCC...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000554533.5
CDS-3UTR CCA 90 bp GTATGCAGGAGTCGTACAGCAATGTCACTTGTTGCTAATATCCTTGGAATCTCAAACACTTCTGTGCCTTaGATTCTTCTTGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: VCRSRTAMSLVANILGISNTSVP*ILLEVC
Trigger: GCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTT...TGAGATTCCAAGGATATTAGCAACAAGTGACATTGCTGTACGACTCCTGCATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR CCA 90 bp CATGTTAATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTTCCAAAATATCCAAGTaGTATACTCCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HVNMSILNQGNRAKGVQASKISK*YTPPRV
Trigger: AACTCTGGGTGGAGTATACCACTTGGATATTTTGGA...AGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATTAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CCA 90 bp GTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGCATCCATCCCTTCACTaGTTTACACTGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VAEIPVFHHAWFFILTIQHPSLH*FTLWRK
Trigger: CTTCCTCCACAGTGTAAACCAGTGAAGGGATGGATG...CTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp ACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACCATCCATCCCTTCACTaGTTTACACTGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TLCCRNTCLSPCLVLHTYHPSLH*FTLWRK
Trigger: CTTCCTCCACAGTGTAAACCAGTGAAGGGATGGATG...GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGCATCCATCCCTTCACTaGTTTACACTGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWHPSLH*FTLWRK
Trigger: CTTCCTCCACAGTGTAAACCAGTGAAGGGATGGATG...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACACATCCATCCCTTCACTaGTTTACACTGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTHPSLH*FTLWRK
Trigger: CTTCCTCCACAGTGTAAACCAGTGAAGGGATGGATG...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGGTAGAGAGCAGCATGTaGCACACAGAGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: FIHSLHCVAEIPVFHHAWVESSM*HTELTN
Trigger: GTTTGTCAACTCTGTGTGCCACATGCTGCTCTCTAC...CCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAGTAGAGAGCAGCATGTaGCACACAGAGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTVESSM*HTELTN
Trigger: GTTTGTCAACTCTGTGTGCCACATGCTGCTCTCTAC...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAGTAGAGAGCAGCATGTaGCACACAGAGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSVESSM*HTELTN
Trigger: GTTTGTCAACTCTGTGTGCCACATGCTGCTCTCTAC...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
3UTR CAA 72 bp AGTGGGTATGCAGGAGTCGTACAGCAATGTCACTTGTaGCTAATATCCTTGGAATCTCAAATCCAATTTGTG +
Preference number: 4 (lower is better)
Translates to: SGYAGVVQQCHL*LISLESQIQFV
Trigger: CACAAATTGGATTTGAGATTCCAAGGATATTAGCAACAAGTGACATTGCTGTACGACTCCTGCATACCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR CAA 72 bp GCTCAGTTACTGCAGAAGTGTATTCTTTTGATGGTGTaGAAACAGGGTGCAGTGCAGAAACATGATCATAGT +
Preference number: 4 (lower is better)
Translates to: AQLLQKCILLMV*KQGAVQKHDHS
Trigger: ACTATGATCATGTTTCTGCACTGCACCCTGTTTCAACACCATCAAAAGAATACACTTCTGCAGTAACTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
3UTR CAA 72 bp CCACCCAGAGTTGTGAACTGGCATAAATCCACCACATaGTCTTCAAAGAAATCTGGCTTTTCAGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: PPRVVNWHKSTT*SSKKSGFSEEF
Trigger: GAATTCTTCTGAAAAGCCAGATTTCTTTGAAGACAATGTGGTGGATTTATGCCAGTTCACAACTCTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR TCA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTCATTTCTTGGGCTACTaGAGGATCAGGACTCCCATC +
Preference number: 4 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLHFLGY*RIRTPI
Trigger: GATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATG...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp GAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTACATTTCTTGGGCTACTaGAGGATCAGGACTCCCATC +
Preference number: 4 (lower is better)
Translates to: EIPVFHHAWFFILTIQFVHFLGY*RIRTPI
Trigger: GATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATG...TACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp GTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: VAEIPVFHHAWFFILTIQTPNLR*RSSCSC
Trigger: ACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGT...CTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWTPNLR*RSSCSC
Trigger: ACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGT...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSTPNLR*RSSCSC
Trigger: ACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGT...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVTPNLR*RSSCSC
Trigger: ACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGT...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp CCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGAACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PVFHHAWFFILTIQFVSGTPNLR*RSSCSC
Trigger: ACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGT...TCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATAGCCTTGGATTCTTCTTaGGGTTTGCCCACACATACA +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTIALDSS*GLPTHT
Trigger: TGTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGC...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp ATAATGAAAGGAATAGGAGTCATCCAGGTTCCTTCCAAAATAGAGATGTGTTTCGCCTTGGATTCTTCTTaGGGTTTGCCCACACATACA +
Preference number: 4 (lower is better)
Translates to: IMKGIGVIQVPSKIEMCFALDSS*GLPTHT
Trigger: TGTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGC...GAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCTTTCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR TCA 90 bp TGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTGCCTTGGATTCTTCTTaGGGTTTGCCCACACATACA +
Preference number: 4 (lower is better)
Translates to: CRNTCLSPCLVLHTYNTVALDSS*GLPTHT
Trigger: TGTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGC...AACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp ATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTCCACCCAGAGTTGTaGACTGGCATAAATCCACCA +
Preference number: 4 (lower is better)
Translates to: MYSFTHYIVLQKYLSFTMLHPEL*TGINPP
Trigger: TGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAG...CATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp ATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTCTGTAATCCTTCTTTaGGTATTTCCACAATCATCC +
Preference number: 4 (lower is better)
Translates to: ILNQGNRAKGVQAECYKSSVILL*VFPQSS
Trigger: GGATGATTGTGGAAATACTCAAAGAAGGATTACAGA...AGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR TCA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGACAGTTGGAACTCCTaGCTTTCTCCATTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFDSWNS*LSPLLP
Trigger: AGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTC...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp TACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTAGACAGTTGGAACTCCTaGCTTTCTCCATTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: YIVLQKYLSFTMLGSSYLDSWNS*LSPLLP
Trigger: AGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTC...TAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp ACATCATCTTTGACAAGCTCAGTTACTGCAGAAGTGTATTCTTTTGATGGTGTTGACAGTTGGAACTCCTaGCTTTCTCCATTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TSSLTSSVTAEVYSFDGVDSWNS*LSPLLP
Trigger: AGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTC...AACACCATCAAAAGAATACACTTCTGCAGTAACTGAGCTTGTCAAAGATGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR TCA 90 bp TTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGACAGAGTTGACAAACTaGCAGTTGGAACTCCTGACT +
Preference number: 4 (lower is better)
Translates to: FIHSLHCVAEIPVFHHAWTELTN*QLELLT
Trigger: AGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGT...CCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACAGAGTTGACAAACTaGCAGTTGGAACTCCTGACT +
Preference number: 4 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHTELTN*QLELLT
Trigger: AGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGT...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGACAGAGTTGACAAACTaGCAGTTGGAACTCCTGACT +
Preference number: 4 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWTELTN*QLELLT
Trigger: AGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGT...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp AGGTTCCACTTGCTCCAACCAAATGCAAAAGCAGAACTTAGTAGGGCCATCTGTCTTTCTTTTTCTTACTaGCAGACATTAAGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: RFHLLQPNAKAELSRAICLSFSY*QTLRVK
Trigger: CTTGACTCTTAATGTCTGGCAGTAAGAAAAAGAAAG...ACAGATGGCCCTACTAAGTTCTGCTTTTGCATTTGGTTGGAGCAAGTGGAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR GCA 90 bp CAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTTGGCTTTCTTTTTCTTACTaGCAGACATTAAGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: QGNRAKGVQAECYKSFFWLSFSY*QTLRVK
Trigger: CTTGACTCTTAATGTCTGGCAGTAAGAAAAAGAAAG...CCAAAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR GCA 90 bp ACTGTCCAGATCTGCCAAAGTACTAGCTTGTTTGAGAAGTATTTCTGTGGCTACAATCTAACACTTCTGTaGCTTGGATTCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: TVQICQSTSLFEKYFCGYNLTLL*LGFFLR
Trigger: CCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGATT...GTAGCCACAGAAATACTTCTCAAACAAGCTAGTACTTTGGCAGATCTGGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR GCA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAGGATTCTCAGTACATaGTTCAGTAAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFRILST*FSKVFP
Trigger: AGGGAACACCTTACTGAAGCATGTACTGAGAATCCT...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp TTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGCTGCCTCATTTGCCTTaGTCACCATTAAGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: FIHSLHCVAEIPVFHHAWLPHLP*SPLRVK
Trigger: CTTGACTCTTAATGGTGAGCAAGGCAAATGAGGCAG...CCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354189.9
CDS-3UTR CCA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFNVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACACCCAGAGTTGTGAACTaGCATAAATCCACCACATTG +
Preference number: 4 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTPRVVN*HKSTTL
Trigger: CAATGTGGTGGATTTATGCCAGTTCACAACTCTGGG...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCCCCAGAGTTGTGAACTaGCATAAATCCACCACATTG +
Preference number: 4 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFPRVVN*HKSTTL
Trigger: CAATGTGGTGGATTTATGCCAGTTCACAACTCTGGG...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCCACTGGTTTACACTGTaGAGGAAGCTCCAAAATATC +
Preference number: 4 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFHWFTL*RKLQNI
Trigger: GATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTG...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACATCCATCCCTTCACTaGTTTACACTGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTIHPSLH*FTLWRK
Trigger: CTTCCTCCACAGTGTAAACCAGTGAAGGGATGGATG...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTCATCCATCCCTTCACTaGTTTACACTGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILHPSLH*FTLWRK
Trigger: CTTCCTCCACAGTGTAAACCAGTGAAGGGATGGATG...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATAGTAGAGAGCAGCATGTaGCACACAGAGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTIVESSM*HTELTN
Trigger: GTTTGTCAACTCTGTGTGCCACATGCTGCTCTCTAC...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp TTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTGTAGAGAGCAGCATGTaGCACACAGAGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: LQKYLSFTMLGSSYLQYSVESSM*HTELTN
Trigger: GTTTGTCAACTCTGTGTGCCACATGCTGCTCTCTAC...ACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTAGAGAGCAGCATGTaGCACACAGAGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTVESSM*HTELTN
Trigger: GTTTGTCAACTCTGTGTGCCACATGCTGCTCTCTAC...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTACTGCCAGATCTTTaGCCACTGAAGCCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFLLPDL*PLKPVC
Trigger: ACAAACAGGCTTCAGTGGCCAAAGATCTGGCAGTAA...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395990.6
CDS-3UTR TCA 90 bp GAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAGCCTTGGATTCTTCTTaGGGTTTGCCCACACATACA +
Preference number: 4 (lower is better)
Translates to: EIPVFHHAWFFILTIQFVALDSS*GLPTHT
Trigger: TGTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGC...TACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGGCCTTGGATTCTTCTTaGGGTTTGCCCACACATACA +
Preference number: 4 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKALDSS*GLPTHT
Trigger: TGTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGC...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCCTTCGACCTCCTTGCTaGTTGCTTTTTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFLRPPC*LLFLHS
Trigger: AGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAG...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR TCA 90 bp TCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTCTTCGACCTCCTTGCTaGTTGCTTTTTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: SFTHYIVLQKYLSFTMLGLRPPC*LLFLHS
Trigger: AGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAG...ACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR TCA 90 bp TCTCTCGTTCACATTTTATGGCTTCAGATTCTTCCTCAGCAGAACTCATTTTCACTTCGACCTCCTTGCTaGTTGCTTTTTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: SLVHILWLQILPQQNSFSLRPPC*LLFLHS
Trigger: AGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAG...TGAAAATGAGTTCTGCTGAGGAAGAATCTGAAGCCATAAAATGTGAACGAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR TCA 90 bp ACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACCAAAGGTGTCCAGGCTaGATGTTACAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TLCCRNTCLSPCLVLHTYQRCPG*MLQVFL
Trigger: AAGAAAGACTTGTAACATTCAGCCTGGACACCTTTG...GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACCAAAGGTGTCCAGGCTaGATGTTACAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYQRCPG*MLQVFL
Trigger: AAGAAAGACTTGTAACATTCAGCCTGGACACCTTTG...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp GAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAGACAGTTGGAACTCCTaGCTTTCTCCATTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: EIPVFHHAWFFILTIQFVDSWNS*LSPLLP
Trigger: AGGAAGCAATGGAGAAAGTCAGGAGTTCCAACTGTC...TACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATAACAGAGTTGACAAACTaGCAGTTGGAACTCCTGACT +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTITELTN*QLELLT
Trigger: AGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGT...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGACAGAGTTGACAAACTaGCAGTTGGAACTCCTGACT +
Preference number: 4 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLTELTN*QLELLT
Trigger: AGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGT...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTACAGAGTTGACAAACTaGCAGTTGGAACTCCTGACT +
Preference number: 4 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFTELTN*QLELLT
Trigger: AGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGT...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTTCCACTGTCCAGATCTaGCAAAGTACTAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVSTVQI*QSTSLF
Trigger: AAACAAGCTAGTACTTTGGCAGATCTGGACAGTGGA...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTCCACTGTCCAGATCTaGCAAAGTACTAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFSTVQI*QSTSLF
Trigger: AAACAAGCTAGTACTTTGGCAGATCTGGACAGTGGA...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp TTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTCCACTGTCCAGATCTaGCAAAGTACTAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FIHSLHCVAEIPVFHHAWSTVQI*QSTSLF
Trigger: AAACAAGCTAGTACTTTGGCAGATCTGGACAGTGGA...CCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATTCTTCTTGAGGTTTaGCCACACATACAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFILLEV*PHIQSN
Trigger: GTTACTCTGTATGTGTGGGCAAACCTCAAGAAGAAT...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGAGGATTCTCAGTACATaGTTCAGTAAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWRILST*FSKVFP
Trigger: AGGGAACACCTTACTGAAGCATGTACTGAGAATCCT...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTAGGATTCTCAGTACATaGTTCAGTAAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVRILST*FSKVFP
Trigger: AGGGAACACCTTACTGAAGCATGTACTGAGAATCCT...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCAGGATTCTCAGTACATaGTTCAGTAAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFRILST*FSKVFP
Trigger: AGGGAACACCTTACTGAAGCATGTACTGAGAATCCT...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWNVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSNVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVNVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp TCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTAACACTTCTGTGCCTTaGATTCTTCTTGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SFTHYIVLQKYLSFTMLGNTSVP*ILLEVC
Trigger: GCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTT...ACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CCA 90 bp CCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGAAACACTTCTGTGCCTTaGATTCTTCTTGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PVFHHAWFFILTIQFVSGNTSVP*ILLEVC
Trigger: GCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTT...TCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTCTTTCTTGTTGTTTaGACTCTTCTTCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVLFLVV*TLLRPP
Trigger: AGGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAG...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CCA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATCTCTTTCTTGTTGTTTaGACTCTTCTTCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHLFLVV*TLLRPP
Trigger: AGGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAG...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CCA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACCTCTTTCTTGTTGTTTaGACTCTTCTTCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYLFLVV*TLLRPP
Trigger: AGGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAG...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp ATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTGTCTTCAAAGAAATCTaGCTTTTCAGAAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: ILNQGNRAKGVQAECYKSVFKEI*LFRRIL
Trigger: GAGAATTCTTCTGAAAAGCCAGATTTCTTTGAAGAC...AGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CCA 90 bp TACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACCCAGAGTTGTGAACTaGCATAAATCCACCACATTG +
Preference number: 4 (lower is better)
Translates to: YIVLQKYLSFTMLGSSYLPRVVN*HKSTTL
Trigger: CAATGTGGTGGATTTATGCCAGTTCACAACTCTGGG...TAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGCCCAGAGTTGTGAACTaGCATAAATCCACCACATTG +
Preference number: 4 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLPRVVN*HKSTTL
Trigger: CAATGTGGTGGATTTATGCCAGTTCACAACTCTGGG...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTCCCAGAGTTGTGAACTaGCATAAATCCACCACATTG +
Preference number: 4 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILPRVVN*HKSTTL
Trigger: CAATGTGGTGGATTTATGCCAGTTCACAACTCTGGG...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACCACTGGTTTACACTGTaGAGGAAGCTCCAAAATATC +
Preference number: 4 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYHWFTL*RKLQNI
Trigger: GATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTG...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCCATCCATCCCTTCACTaGTTTACACTGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTHPSLH*FTLWRK
Trigger: CTTCCTCCACAGTGTAAACCAGTGAAGGGATGGATG...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGTGTGACCTCTATAGGTaGGAAAGCATTTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWCDLYR*ESIFCL
Trigger: GAGACAGAAAATGCTTTCCCACCTATAGAGGTCACA...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGTAGAGAGCAGCATGTaGCACACAGAGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLVESSM*HTELTN
Trigger: GTTTGTCAACTCTGTGTGCCACATGCTGCTCTCTAC...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp ATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGTAGAGAGCAGCATGTaGCACACAGAGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: IPVFHHAWFFILTIQFVSVESSM*HTELTN
Trigger: GTTTGTCAACTCTGTGTGCCACATGCTGCTCTCTAC...ACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp TTCAAAGAAATCTGGCTTTTCAGAAGAATTCTCTACCAGCAACAACTGTGCTGCAATACAGTTTGTAAGTaGAGGTTAGGAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FKEIWLFRRILYQQQLCCNTVCK*RLGVAE
Trigger: CTCAGCTACTCCTAACCTCCACTTACAAACTGTATT...GCAGCACAGTTGTTGCTGGTAGAGAATTCTTCTGAAAAGCCAGATTTCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR TCA 90 bp ATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: MYSFTHYIVLQKYLSFTMTPNLR*RSSCSC
Trigger: ACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGT...CATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCTPNLR*RSSCSC
Trigger: ACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGT...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp GTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTCTTCGACCTCCTTGCTaGTTGCTTTTTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: VFIHSLHCVAEIPVFHHALRPPC*LLFLHS
Trigger: AGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAG...AGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR TCA 90 bp TACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACTTCGACCTCCTTGCTaGTTGCTTTTTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: YIVLQKYLSFTMLGSSYLLRPPC*LLFLHS
Trigger: AGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAG...TAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR TCA 90 bp TGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTCTTCGACCTCCTTGCTaGTTGCTTTTTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: CRNTCLSPCLVLHTYNTVLRPPC*LLFLHS
Trigger: AGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAG...AACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp TTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGAAGATTACATTCTCATaGACCTCAAGTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: FIHSLHCVAEIPVFHHAWKITFS*TSSVTS
Trigger: AGAGGTCACACTTGAGGTTCATGAGAATGTAATCTT...CCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp TCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTAAGATTACATTCTCATaGACCTCAAGTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: SFTHYIVLQKYLSFTMLGKITFS*TSSVTS
Trigger: AGAGGTCACACTTGAGGTTCATGAGAATGTAATCTT...ACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACACAAAGGTGTCCAGGCTaGATGTTACAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTQRCPG*MLQVFL
Trigger: AAGAAAGACTTGTAACATTCAGCCTGGACACCTTTG...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp ATAATGAAAGGAATAGGAGTCATCCAGGTTCCTTCCAAAATAGAGATGTGTTTCCAAAGGTGTCCAGGCTaGATGTTACAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: IMKGIGVIQVPSKIEMCFQRCPG*MLQVFL
Trigger: AAGAAAGACTTGTAACATTCAGCCTGGACACCTTTG...GAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCTTTCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR TCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAAAGGTGTCCAGGCTaGATGTTACAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTIQRCPG*MLQVFL
Trigger: AAGAAAGACTTGTAACATTCAGCCTGGACACCTTTG...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp TTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTCAAAGGTGTCCAGGCTaGATGTTACAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LQKYLSFTMLGSSYLQYSQRCPG*MLQVFL
Trigger: AAGAAAGACTTGTAACATTCAGCCTGGACACCTTTG...ACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTACAGAGTTGACAAACTaGCAGTTGGAACTCCTGACT +
Preference number: 4 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLTELTN*QLELLT
Trigger: AGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGT...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACACTGTTTCAATTTCTCTaGTTCAGGAAAACACCTCTC +
Preference number: 4 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTLFQFL*FRKTPL
Trigger: GAGAGGTGTTTTCCTGAAGCAGAGAAATTGAAACAG...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACCTGTTTCAATTTCTCTaGTTCAGGAAAACACCTCTC +
Preference number: 4 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYLFQFL*FRKTPL
Trigger: GAGAGGTGTTTTCCTGAAGCAGAGAAATTGAAACAG...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCACTGTTTCAATTTCTCTaGTTCAGGAAAACACCTCTC +
Preference number: 4 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSLFQFL*FRKTPL
Trigger: GAGAGGTGTTTTCCTGAAGCAGAGAAATTGAAACAG...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGCTGTTTCAATTTCTCTaGTTCAGGAAAACACCTCTC +
Preference number: 4 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWLFQFL*FRKTPL
Trigger: GAGAGGTGTTTTCCTGAAGCAGAGAAATTGAAACAG...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATATCCACTGTCCAGATCTaGCAAAGTACTAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTISTVQI*QSTSLF
Trigger: AAACAAGCTAGTACTTTGGCAGATCTGGACAGTGGA...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp ATAATGAAAGGAATAGGAGTCATCCAGGTTCCTTCCAAAATAGAGATGTGTTTCTCCACTGTCCAGATCTaGCAAAGTACTAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IMKGIGVIQVPSKIEMCFSTVQI*QSTSLF
Trigger: AAACAAGCTAGTACTTTGGCAGATCTGGACAGTGGA...GAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCTTTCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR GCA 90 bp CCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGAATTCTTCTTGAGGTTTaGCCACACATACAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: PVFHHAWFFILTIQFVSGILLEV*PHIQSN
Trigger: GTTACTCTGTATGTGTGGGCAAACCTCAAGAAGAAT...TCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTAATCTAACACTTCTGTaGCTTGGATTCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SFTHYIVLQKYLSFTMLGNLTLL*LGFFLR
Trigger: CCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGATT...ACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAAATCTAACACTTCTGTaGCTTGGATTCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTNLTLL*LGFFLR
Trigger: CCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGATT...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCGACCTCCTTGCTGATTaGTTTTTCTACATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFDLLAD*FFYILN
Trigger: GTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTC...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp CCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGAATAGTAGGTTCCACTTaGTCCAACCAAATGCAAAAG +
Preference number: 4 (lower is better)
Translates to: PVFHHAWFFILTIQFVSGIVGST*SNQMQK
Trigger: CTTTTGCATTTGGTTGGAGCAAGTGGAACCTACTAT...TCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCATAGTAGGTTCCACTTaGTCCAACCAAATGCAAAAG +
Preference number: 4 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFIVGST*SNQMQK
Trigger: CTTTTGCATTTGGTTGGAGCAAGTGGAACCTACTAT...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTAGGATTCTCAGTACATaGTTCAGTAAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFRILST*FSKVFP
Trigger: AGGGAACACCTTACTGAAGCATGTACTGAGAATCCT...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAGATCTTCAGTCTTTGTaGTCTGTCACCACTAAACAT +
Preference number: 4 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSDLQSL*SVTTKH
Trigger: ATGTTTAGTGGTGACAGAGCACAAAGACTGAAGATC...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGGATCTTCAGTCTTTGTaGTCTGTCACCACTAAACAT +
Preference number: 4 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWDLQSL*SVTTKH
Trigger: ATGTTTAGTGGTGACAGAGCACAAAGACTGAAGATC...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATGATCTTCAGTCTTTGTaGTCTGTCACCACTAAACAT +
Preference number: 4 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHDLQSL*SVTTKH
Trigger: ATGTTTAGTGGTGACAGAGCACAAAGACTGAAGATC...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp GTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGACCTGTCTTTCACCATaGTTGGTTCTTCATACTTAC +
Preference number: 4 (lower is better)
Translates to: VAEIPVFHHAWFFILTIQTCLSP*LVLHTY
Trigger: GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT...CTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAACCTGTCTTTCACCATaGTTGGTTCTTCATACTTAC +
Preference number: 4 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSTCLSP*LVLHTY
Trigger: GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCACCTGTCTTTCACCATaGTTGGTTCTTCATACTTAC +
Preference number: 4 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFTCLSP*LVLHTY
Trigger: GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp TTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGACCTGTCTTTCACCATaGTTGGTTCTTCATACTTAC +
Preference number: 4 (lower is better)
Translates to: FIHSLHCVAEIPVFHHAWTCLSP*LVLHTY
Trigger: GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT...CCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACACCTGTCTTTCACCATaGTTGGTTCTTCATACTTAC +
Preference number: 4 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYTCLSP*LVLHTY
Trigger: GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILNVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATAAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTINVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTAACACTTCTGTGCCTTaGATTCTTCTTGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFNTSVP*ILLEVC
Trigger: GCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTT...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTCCCAGAGTTGTGAACTaGCATAAATCCACCACATTG +
Preference number: 4 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCPRVVN*HKSTTL
Trigger: CAATGTGGTGGATTTATGCCAGTTCACAACTCTGGG...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTCCAAAATATCCAAGTaGTATACTCCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFSKISK*YTPPRV
Trigger: AACTCTGGGTGGAGTATACCACTTGGATATTTTGGA...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp ACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACTCCAAAATATCCAAGTaGTATACTCCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: TLCCRNTCLSPCLVLHTYSKISK*YTPPRV
Trigger: AACTCTGGGTGGAGTATACCACTTGGATATTTTGGA...GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTTCCAAAATATCCAAGTaGTATACTCCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVSKISK*YTPPRV
Trigger: AACTCTGGGTGGAGTATACCACTTGGATATTTTGGA...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACACTGGTTTACACTGTaGAGGAAGCTCCAAAATATC +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTIHWFTL*RKLQNI
Trigger: GATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTG...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTCACTGGTTTACACTGTaGAGGAAGCTCCAAAATATC +
Preference number: 4 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFHWFTL*RKLQNI
Trigger: GATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTG...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp GTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTCACTGGTTTACACTGTaGAGGAAGCTCCAAAATATC +
Preference number: 4 (lower is better)
Translates to: VFIHSLHCVAEIPVFHHAHWFTL*RKLQNI
Trigger: GATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTG...AGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTCACTGGTTTACACTGTaGAGGAAGCTCCAAAATATC +
Preference number: 4 (lower is better)
Translates to: CRNTCLSPCLVLHTYNTVHWFTL*RKLQNI
Trigger: GATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTG...AACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp ATAATGAAAGGAATAGGAGTCATCCAGGTTCCTTCCAAAATAGAGATGTGTTTCCACTGGTTTACACTGTaGAGGAAGCTCCAAAATATC +
Preference number: 4 (lower is better)
Translates to: IMKGIGVIQVPSKIEMCFHWFTL*RKLQNI
Trigger: GATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTG...GAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCTTTCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CCA 90 bp GTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGTGACCTCTATAGGTaGGAAAGCATTTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: VFIHSLHCVAEIPVFHHACDLYR*ESIFCL
Trigger: GAGACAGAAAATGCTTTCCCACCTATAGAGGTCACA...AGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGAATACAGTTTGTAAGTaGAGGTTAGGAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FIHSLHCVAEIPVFHHAWNTVCK*RLGVAE
Trigger: CTCAGCTACTCCTAACCTCCACTTACAAACTGTATT...CCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAAATACAGTTTGTAAGTaGAGGTTAGGAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSNTVCK*RLGVAE
Trigger: CTCAGCTACTCCTAACCTCCACTTACAAACTGTATT...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGAATACAGTTTGTAAGTaGAGGTTAGGAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWNTVCK*RLGVAE
Trigger: CTCAGCTACTCCTAACCTCCACTTACAAACTGTATT...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp ATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTCGACCTCCTTGCTaGTTGCTTTTTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: MYSFTHYIVLQKYLSFTMLRPPC*LLFLHS
Trigger: AGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAG...CATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR TCA 90 bp GAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTACTTCGACCTCCTTGCTaGTTGCTTTTTCTACATTCT +
Preference number: 4 (lower is better)
Translates to: EIPVFHHAWFFILTIQFVLRPPC*LLFLHS
Trigger: AGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAG...TACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATTCTGTAATCCTTCTTTaGGTATTTCCACAATCATCC +
Preference number: 4 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHSVILL*VFPQSS
Trigger: GGATGATTGTGGAAATACTCAAAGAAGGATTACAGA...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTCTGTAATCCTTCTTTaGGTATTTCCACAATCATCC +
Preference number: 4 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFSVILL*VFPQSS
Trigger: GGATGATTGTGGAAATACTCAAAGAAGGATTACAGA...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp GTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTAAGATTACATTCTCATaGACCTCAAGTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: VFIHSLHCVAEIPVFHHAKITFS*TSSVTS
Trigger: AGAGGTCACACTTGAGGTTCATGAGAATGTAATCTT...AGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTCAAAGGTGTCCAGGCTaGATGTTACAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLQRCPG*MLQVFL
Trigger: AAGAAAGACTTGTAACATTCAGCCTGGACACCTTTG...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTCAAAGGTGTCCAGGCTaGATGTTACAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCQRCPG*MLQVFL
Trigger: AAGAAAGACTTGTAACATTCAGCCTGGACACCTTTG...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGCAAAGGTGTCCAGGCTaGATGTTACAAGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKQRCPG*MLQVFL
Trigger: AAGAAAGACTTGTAACATTCAGCCTGGACACCTTTG...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR TCA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATCTTCGCTGTAAAATATaGCTGGCTCTTGATTACATT +
Preference number: 4 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHLRCKI*LALDYI
Trigger: AATGTAATCAAGAGCCAGTCATATTTTACAGCGAAG...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354189.9
CDS-3UTR GCA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCCTTTCTTTTTCTTACTaGCAGACATTAAGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFLSFSY*QTLRVK
Trigger: CTTGACTCTTAATGTCTGGCAGTAAGAAAAAGAAAG...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320267.13
ENST00000554533.5
CDS-3UTR GCA 90 bp ATCAGGACTCCCATCACATTGAATGTAGTGCTTCCACTGAGAAAGCAATTTAGTCTTTCTTTTTCTTACTaGCAGACATTAAGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: IRTPITLNVVLPLRKQFSLSFSY*QTLRVK
Trigger: CTTGACTCTTAATGTCTGGCAGTAAGAAAAAGAAAG...ACTAAATTGCTTTCTCAGTGGAAGCACTACATTCAATGTGATGGGAGTCCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000556467.5
CDS-3UTR GCA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTCTGTTTCAATTTCTCTaGTTCAGGAAAACACCTCTC +
Preference number: 4 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILLFQFL*FRKTPL
Trigger: GAGAGGTGTTTTCCTGAAGCAGAGAAATTGAAACAG...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTCTGTTTCAATTTCTCTaGTTCAGGAAAACACCTCTC +
Preference number: 4 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFLFQFL*FRKTPL
Trigger: GAGAGGTGTTTTCCTGAAGCAGAGAAATTGAAACAG...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp ATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTTCCACTGTCCAGATCTaGCAAAGTACTAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IPVFHHAWFFILTIQFVSSTVQI*QSTSLF
Trigger: AAACAAGCTAGTACTTTGGCAGATCTGGACAGTGGA...ACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTCCACTGTCCAGATCTaGCAAAGTACTAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKSTVQI*QSTSLF
Trigger: AAACAAGCTAGTACTTTGGCAGATCTGGACAGTGGA...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp GAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTATCCACTGTCCAGATCTaGCAAAGTACTAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: EIPVFHHAWFFILTIQFVSTVQI*QSTSLF
Trigger: AAACAAGCTAGTACTTTGGCAGATCTGGACAGTGGA...TACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAATTCTTCTTGAGGTTTaGCCACACATACAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTILLEV*PHIQSN
Trigger: GTTACTCTGTATGTGTGGGCAAACCTCAAGAAGAAT...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATAAATCTAACACTTCTGTaGCTTGGATTCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTINLTLL*LGFFLR
Trigger: CCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGATT...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTAATCTAACACTTCTGTaGCTTGGATTCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFNLTLL*LGFFLR
Trigger: CCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGATT...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTGACCTCCTTGCTGATTaGTTTTTCTACATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: SFTHYIVLQKYLSFTMLGDLLAD*FFYILN
Trigger: GTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTC...ACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATGACCTCCTTGCTGATTaGTTTTTCTACATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHDLLAD*FFYILN
Trigger: GTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTC...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACGACCTCCTTGCTGATTaGTTTTTCTACATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYDLLAD*FFYILN
Trigger: GTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTC...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTAATAGTAGGTTCCACTTaGTCCAACCAAATGCAAAAG +
Preference number: 4 (lower is better)
Translates to: YIVLQKYLSFTMLGSSYLIVGST*SNQMQK
Trigger: CTTTTGCATTTGGTTGGAGCAAGTGGAACCTACTAT...TAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAATAGTAGGTTCCACTTaGTCCAACCAAATGCAAAAG +
Preference number: 4 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTIVGST*SNQMQK
Trigger: CTTTTGCATTTGGTTGGAGCAAGTGGAACCTACTAT...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp GTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTATAGTAGGTTCCACTTaGTCCAACCAAATGCAAAAG +
Preference number: 4 (lower is better)
Translates to: VFIHSLHCVAEIPVFHHAIVGST*SNQMQK
Trigger: CTTTTGCATTTGGTTGGAGCAAGTGGAACCTACTAT...AGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGATAGTAGGTTCCACTTaGTCCAACCAAATGCAAAAG +
Preference number: 4 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLIVGST*SNQMQK
Trigger: CTTTTGCATTTGGTTGGAGCAAGTGGAACCTACTAT...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTATAGTAGGTTCCACTTaGTCCAACCAAATGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LQKYLSFTMLGSSYLQYSIVGST*SNQMQK
Trigger: CTTTTGCATTTGGTTGGAGCAAGTGGAACCTACTAT...ACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp GAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGGATTCTCAGTACATaGTTCAGTAAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: EIPVFHHAWFFILTIQFVRILST*FSKVFP
Trigger: AGGGAACACCTTACTGAAGCATGTACTGAGAATCCT...TACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATAGATCTTCAGTCTTTGTaGTCTGTCACCACTAAACAT +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTIDLQSL*SVTTKH
Trigger: ATGTTTAGTGGTGACAGAGCACAAAGACTGAAGATC...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTAGATCTTCAGTCTTTGTaGTCTGTCACCACTAAACAT +
Preference number: 4 (lower is better)
Translates to: YIVLQKYLSFTMLGSSYLDLQSL*SVTTKH
Trigger: ATGTTTAGTGGTGACAGAGCACAAAGACTGAAGATC...TAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR GCA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGATCTTCAGTCTTTGTaGTCTGTCACCACTAAACAT +
Preference number: 4 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTDLQSL*SVTTKH
Trigger: ATGTTTAGTGGTGACAGAGCACAAAGACTGAAGATC...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTACCTGTCTTTCACCATaGTTGGTTCTTCATACTTAC +
Preference number: 4 (lower is better)
Translates to: CRNTCLSPCLVLHTYNTVTCLSP*LVLHTY
Trigger: GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT...AACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCNVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCAACGTGTTCATTTCTTaGGCTACTGAAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTNVFIS*ATEGSG
Trigger: TCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTT...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCAACACTTCTGTGCCTTaGATTCTTCTTGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTNTSVP*ILLEVC
Trigger: GCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTT...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CCA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAACACTTCTGTGCCTTaGATTCTTCTTGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCNTSVP*ILLEVC
Trigger: GCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTT...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp ATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTAACACTTCTGTGCCTTaGATTCTTCTTGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: IPVFHHAWFFILTIQFVSNTSVP*ILLEVC
Trigger: GCAAACCTCAAGAAGAATCCAAGGCACAGAAGTGTT...ACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp ATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTCTTTCTTGTTGTTTaGACTCTTCTTCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: MYSFTHYIVLQKYLSFTMLFLVV*TLLRPP
Trigger: AGGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAG...CATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CCA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACATCCAAAATATCCAAGTaGTATACTCCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTSKISK*YTPPRV
Trigger: AACTCTGGGTGGAGTATACCACTTGGATATTTTGGA...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATATCCAAAATATCCAAGTaGTATACTCCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTISKISK*YTPPRV
Trigger: AACTCTGGGTGGAGTATACCACTTGGATATTTTGGA...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTCCAAAATATCCAAGTaGTATACTCCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLSKISK*YTPPRV
Trigger: AACTCTGGGTGGAGTATACCACTTGGATATTTTGGA...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTCACTGGTTTACACTGTaGAGGAAGCTCCAAAATATC +
Preference number: 4 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLHWFTL*RKLQNI
Trigger: GATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTG...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTTGTGACCTCTATAGGTaGGAAAGCATTTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLCDLYR*ESIFCL
Trigger: GAGACAGAAAATGCTTTCCCACCTATAGAGGTCACA...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGTGACCTCTATAGGTaGGAAAGCATTTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKCDLYR*ESIFCL
Trigger: GAGACAGAAAATGCTTTCCCACCTATAGAGGTCACA...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCTGTGACCTCTATAGGTaGGAAAGCATTTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTCDLYR*ESIFCL
Trigger: GAGACAGAAAATGCTTTCCCACCTATAGAGGTCACA...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTAATACAGTTTGTAAGTaGAGGTTAGGAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILNTVCK*RLGVAE
Trigger: CTCAGCTACTCCTAACCTCCACTTACAAACTGTATT...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp GTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTAATACAGTTTGTAAGTaGAGGTTAGGAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VFIHSLHCVAEIPVFHHANTVCK*RLGVAE
Trigger: CTCAGCTACTCCTAACCTCCACTTACAAACTGTATT...AGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAAATACAGTTTGTAAGTaGAGGTTAGGAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTNTVCK*RLGVAE
Trigger: CTCAGCTACTCCTAACCTCCACTTACAAACTGTATT...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
3UTR CAA 72 bp ACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTaGGTTCTTCATACTTACAATACAGTTTGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: TLCCRNTCLSPC*VLHTYNTVCKW
Trigger: CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTCTGTAATCCTTCTTTaGGTATTTCCACAATCATCC +
Preference number: 4 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLSVILL*VFPQSS
Trigger: GGATGATTGTGGAAATACTCAAAGAAGGATTACAGA...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp TACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTATCTGTAATCCTTCTTTaGGTATTTCCACAATCATCC +
Preference number: 4 (lower is better)
Translates to: YIVLQKYLSFTMLGSSYLSVILL*VFPQSS
Trigger: GGATGATTGTGGAAATACTCAAAGAAGGATTACAGA...TAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp GTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTCTGTAATCCTTCTTTaGGTATTTCCACAATCATCC +
Preference number: 4 (lower is better)
Translates to: VFIHSLHCVAEIPVFHHASVILL*VFPQSS
Trigger: GGATGATTGTGGAAATACTCAAAGAAGGATTACAGA...AGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGAAGATTACATTCTCATaGACCTCAAGTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKKITFS*TSSVTS
Trigger: AGAGGTCACACTTGAGGTTCATGAGAATGTAATCTT...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR TCA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGATTACATTCTCATaGACCTCAAGTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCKITFS*TSSVTS
Trigger: AGAGGTCACACTTGAGGTTCATGAGAATGTAATCTT...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR GCA 90 bp ATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTCTGTTTCAATTTCTCTaGTTCAGGAAAACACCTCTC +
Preference number: 4 (lower is better)
Translates to: IPVFHHAWFFILTIQFVSLFQFL*FRKTPL
Trigger: GAGAGGTGTTTTCCTGAAGCAGAGAAATTGAAACAG...ACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGATTCTTCTTGAGGTTTaGCCACACATACAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKILLEV*PHIQSN
Trigger: GTTACTCTGTATGTGTGGGCAAACCTCAAGAAGAAT...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp GAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAATTCTTCTTGAGGTTTaGCCACACATACAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: EIPVFHHAWFFILTIQFVILLEV*PHIQSN
Trigger: GTTACTCTGTATGTGTGGGCAAACCTCAAGAAGAAT...TACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp ATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTATTCTTCTTGAGGTTTaGCCACACATACAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: IPVFHHAWFFILTIQFVSILLEV*PHIQSN
Trigger: GTTACTCTGTATGTGTGGGCAAACCTCAAGAAGAAT...ACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCAATCTAACACTTCTGTaGCTTGGATTCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTNLTLL*LGFFLR
Trigger: CCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGATT...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp ATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGAATCTAACACTTCTGTaGCTTGGATTCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: MYSFTHYIVLQKYLSFTMNLTLL*LGFFLR
Trigger: CCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGATT...CATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp ATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTAATCTAACACTTCTGTaGCTTGGATTCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: IPVFHHAWFFILTIQFVSNLTLL*LGFFLR
Trigger: CCTCAAGAAGAATCCAAGGCACAGAAGTGTTAGATT...ACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATAGACCTCCTTGCTGATTaGTTTTTCTACATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: CVAEIPVFHHAWFFILTIDLLAD*FFYILN
Trigger: GTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTC...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp TACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTAGACCTCCTTGCTGATTaGTTTTTCTACATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: YIVLQKYLSFTMLGSSYLDLLAD*FFYILN
Trigger: GTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTC...TAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGGATCTTCAGTCTTTGTaGTCTGTCACCACTAAACAT +
Preference number: 4 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKDLQSL*SVTTKH
Trigger: ATGTTTAGTGGTGACAGAGCACAAAGACTGAAGATC...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCACCTGTCTTTCACCATaGTTGGTTCTTCATACTTAC +
Preference number: 4 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTTCLSP*LVLHTY
Trigger: GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp GTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGGTCTTCAAAGAAATCTaGCTTTTCAGAAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: VAEIPVFHHAWFFILTIQVFKEI*LFRRIL
Trigger: GAGAATTCTTCTGAAAAGCCAGATTTCTTTGAAGAC...CTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTTCCAAAATATCCAAGTaGTATACTCCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCSKISK*YTPPRV
Trigger: AACTCTGGGTGGAGTATACCACTTGGATATTTTGGA...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTAATACAGTTTGTAAGTaGAGGTTAGGAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLNTVCK*RLGVAE
Trigger: CTCAGCTACTCCTAACCTCCACTTACAAACTGTATT...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGGTCTTTCACCATGCTTaGTTCTTCATACTTACAATA +
Preference number: 4 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWVFHHA*FFILTI
Trigger: TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGAC...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp ACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACGTCTTTCACCATGCTTaGTTCTTCATACTTACAATA +
Preference number: 4 (lower is better)
Translates to: TLCCRNTCLSPCLVLHTYVFHHA*FFILTI
Trigger: TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGAC...GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR TCA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTTCTGTAATCCTTCTTTaGGTATTTCCACAATCATCC +
Preference number: 4 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCSVILL*VFPQSS
Trigger: GGATGATTGTGGAAATACTCAAAGAAGGATTACAGA...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR GCA 90 bp ATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGGACCTCCTTGCTGATTaGTTTTTCTACATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: MYSFTHYIVLQKYLSFTMDLLAD*FFYILN
Trigger: GTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTC...CATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR GCA 90 bp GAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAGACCTCCTTGCTGATTaGTTTTTCTACATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: EIPVFHHAWFFILTIQFVDLLAD*FFYILN
Trigger: GTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTC...TACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp TTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTGTCTTCAAAGAAATCTaGCTTTTCAGAAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: LQKYLSFTMLGSSYLQYSVFKEI*LFRRIL
Trigger: GAGAATTCTTCTGAAAAGCCAGATTTCTTTGAAGAC...ACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTCTTCAAAGAAATCTaGCTTTTCAGAAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFVFKEI*LFRRIL
Trigger: GAGAATTCTTCTGAAAAGCCAGATTTCTTTGAAGAC...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp GTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTGTCTTCAAAGAAATCTaGCTTTTCAGAAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: VFIHSLHCVAEIPVFHHAVFKEI*LFRRIL
Trigger: GAGAATTCTTCTGAAAAGCCAGATTTCTTTGAAGAC...AGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp ATAATGAAAGGAATAGGAGTCATCCAGGTTCCTTCCAAAATAGAGATGTGTTTCGTCTTCAAAGAAATCTaGCTTTTCAGAAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: IMKGIGVIQVPSKIEMCFVFKEI*LFRRIL
Trigger: GAGAATTCTTCTGAAAAGCCAGATTTCTTTGAAGAC...GAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCTTTCATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CCA 90 bp TACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTAGTCTTTCACCATGCTTaGTTCTTCATACTTACAATA +
Preference number: 4 (lower is better)
Translates to: YIVLQKYLSFTMLGSSYLVFHHA*FFILTI
Trigger: TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGAC...TAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CCA 90 bp TGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTGTCTTTCACCATGCTTaGTTCTTCATACTTACAATA +
Preference number: 4 (lower is better)
Translates to: CRNTCLSPCLVLHTYNTVVFHHA*FFILTI
Trigger: TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGAC...AACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR GCA 90 bp GAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTACTTTCTTTTTCTTACTaGCAGACATTAAGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: EIPVFHHAWFFILTIQFVLSFSY*QTLRVK
Trigger: CTTGACTCTTAATGTCTGGCAGTAAGAAAAAGAAAG...TACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320267.13
ENST00000554533.5
ENST00000676236.1
CDS-3UTR CCA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGTCTTCAAAGAAATCTaGCTTTTCAGAAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLVFKEI*LFRRIL
Trigger: GAGAATTCTTCTGAAAAGCCAGATTTCTTTGAAGAC...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
CDS-3UTR CCA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTGTCTTTCACCATGCTTaGTTCTTCATACTTACAATA +
Preference number: 4 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCVFHHA*FFILTI
Trigger: TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGAC...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp ATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGTCTTTCACCATGCTTaGTTCTTCATACTTACAATA +
Preference number: 4 (lower is better)
Translates to: IPVFHHAWFFILTIQFVSVFHHA*FFILTI
Trigger: TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGAC...ACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CCA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGTCTTTCACCATGCTTaGTTCTTCATACTTACAATA +
Preference number: 4 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLVFHHA*FFILTI
Trigger: TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGAC...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS TCA 90 bp GCTTTGGGACCCTGTCCGCCTGGTCCAGGTAAGGAAAGCCATTGCTaGGAAGAGGGCCGACCCACCCCAAGGTATGAGTTATTTCCCAAA +
Preference number: 5 (lower is better)
Translates to: ALGPCPPGPGKESHC*EEGRPTPRYELFPK
Trigger: TTTGGGAAATAACTCATACCTTGGGGTGGGTCGGCCCTCTTCTCAGCAATGGCTTTCCTTACCTGGACCAGGCGGACAGGGTCCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354189.9
CDS-3UTR CAA 90 bp CATGTTAATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAGTCGGAGCAGAAATaGTGTGGACAAACGCTCCCG +
Preference number: 5 (lower is better)
Translates to: HVNMSILNQGNRAKGVQAESEQK*CGQTLP
Trigger: CGGGAGCGTTTGTCCACACAATTTCTGCTCCGACTC...AGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATTAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR CAA 90 bp ATCAGGACTCCCATCACATTGAATGTAGTGCTTCCACTGAGAAAGCAATTTAGTGAGTCGGAGCAGAAATaGTGTGGACAAACGCTCCCG +
Preference number: 5 (lower is better)
Translates to: IRTPITLNVVLPLRKQFSESEQK*CGQTLP
Trigger: CGGGAGCGTTTGTCCACACAATTTCTGCTCCGACTC...ACTAAATTGCTTTCTCAGTGGAAGCACTACATTCAATGTGATGGGAGTCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000556467.5
CDS-3UTR CAA 90 bp AGGTTCCACTTGCTCCAACCAAATGCAAAAGCAGAACTTAGTAGGGCCATCTGTAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: RFHLLQPNAKAELSRAICRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...ACAGATGGCCCTACTAAGTTCTGCTTTTGCATTTGGTTGGAGCAAGTGGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR CAA 90 bp CAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTTGGAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: QGNRAKGVQAECYKSFFWRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...CCAAAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAGAGTCGGAGCAGAAATaGTGTGGACAAACGCTCCCG +
Preference number: 5 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSESEQK*CGQTLP
Trigger: CGGGAGCGTTTGTCCACACAATTTCTGCTCCGACTC...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000554533.5
CDS-3UTR CAA 90 bp CCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGAGAGTCGGAGCAGAAATaGTGTGGACAAACGCTCCCG +
Preference number: 5 (lower is better)
Translates to: PVFHHAWFFILTIQFVSGESEQK*CGQTLP
Trigger: CGGGAGCGTTTGTCCACACAATTTCTGCTCCGACTC...TCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000554533.5
CDS-3UTR CAA 90 bp AGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGATTCTTTTGATGGTGTaGAAACAGGGTGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: SILNQGNRAKGVQAECYKILLMV*KQGAVQ
Trigger: CTGCACTGCACCCTGTTTCAACACCATCAAAAGAAT...CTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp AGAGAGCAGCATGTGGCACACAGAGTTGACAAACTGACAGTTGGAACTCCTGACCAGAAGTGTATTCTTTaGATGGTGTTGAAACAGGGT +
Preference number: 5 (lower is better)
Translates to: REQHVAHRVDKLTVGTPDQKCIL*MVLKQG
Trigger: ACCCTGTTTCAACACCATCAAAAGAATACACTTCTG...GTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGTGTGCCACATGCTGCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
CDS-3UTR CAA 90 bp AATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTCCTCTTTCTTGTTGTTaGGACTCTTCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: NMSILNQGNRAKGVQAECPLSCC*DSSSTS
Trigger: GGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAGG...ACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp CAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTTGGAGACCCTCTTTCTTGTaGTTTGGACTCTTCTTCGAC +
Preference number: 5 (lower is better)
Translates to: QGNRAKGVQAECYKSFFWRPSFL*FGLFFD
Trigger: GTCGAAGAAGAGTCCAAACAACAAGAAAGAGGGTCT...CCAAAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp GTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTGAGTCGGAGCAGAAATaGTGTGGACAAACGCTCCCG +
Preference number: 5 (lower is better)
Translates to: VFIHSLHCVAEIPVFHHAESEQK*CGQTLP
Trigger: CGGGAGCGTTTGTCCACACAATTTCTGCTCCGACTC...AGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000554533.5
CDS-3UTR CAA 90 bp AAACTAATAAACGTGTTCATTTCTTGGGCTACTGAAGGATCAGGACTCCCATCAAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: KLINVFISWATEGSGLPSRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...TGATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTTTATTAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000556467.5
CDS-3UTR CAA 90 bp CATGTGGCACACAGAGTTGACAAACTGACAGTTGGAACTCCTGACTTTCTCCATCAGCAATGTCACTTGTaGCTAATATCCTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: HVAHRVDKLTVGTPDFLHQQCHL*LISLES
Trigger: AGATTCCAAGGATATTAGCAACAAGTGACATTGCTG...ATGGAGAAAGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGTGTGCCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
CDS-3UTR CAA 90 bp AGGTTCCACTTGCTCCAACCAAATGCAAAAGCAGAACTTAGTAGGGCCATCTGTCAGCAATGTCACTTGTaGCTAATATCCTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: RFHLLQPNAKAELSRAICQQCHL*LISLES
Trigger: AGATTCCAAGGATATTAGCAACAAGTGACATTGCTG...ACAGATGGCCCTACTAAGTTCTGCTTTTGCATTTGGTTGGAGCAAGTGGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR CAA 90 bp AGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGCAGCAATGTCACTTGTaGCTAATATCCTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: SILNQGNRAKGVQAECYKQQCHL*LISLES
Trigger: AGATTCCAAGGATATTAGCAACAAGTGACATTGCTG...CTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp CATGTTAATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTTCTTCTTCGACCTCCTaGCTGATTGCTTTTTCTACA +
Preference number: 5 (lower is better)
Translates to: HVNMSILNQGNRAKGVQASSSTS*LIAFST
Trigger: TGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGA...AGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATTAACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp AATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTAGACCCTCTTTCTTGTaGTTTGGACTCTTCTTCGAC +
Preference number: 5 (lower is better)
Translates to: NQGNRAKGVQAECYKSFFRPSFL*FGLFFD
Trigger: GTCGAAGAAGAGTCCAAACAACAAGAAAGAGGGTCT...AAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp AATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTTCTTTGTGAGACCCTCTTTCTaGTTGTTTGGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: NQGNRAKGVQAECYKSFFVRPSF*LFGLFF
Trigger: GAAGAAGAGTCCAAACAACAAGAAAGAGGGTCTCAC...AAAGAAAGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp AATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTGTTAATATGAGCATCTaGAATCAAGGTAACAGGGCC +
Preference number: 5 (lower is better)
Translates to: NMSILNQGNRAKGVQAECVNMSI*NQGNRA
Trigger: GGCCCTGTTACCTTGATTCAAGATGCTCATATTAAC...ACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp ATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTCCTTTCTAGATCTTTaGCTTCAAGTCGATGCCATT +
Preference number: 5 (lower is better)
Translates to: ILNQGNRAKGVQAECYKSSFLDL*LQVDAI
Trigger: AATGGCATCGACTTGAAGCAAAAGATCTAGAAAGGA...AGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557684.6
CDS-3UTR CAA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp GTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: VAEIPVFHHAWFFILTIQRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...CTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp CCATCCCTTCACTGGTTTACACTGTGGAGGAAGCTCCAAAATATCCAAGTGGTACCTGCAGTTGTAGTATaGATTCTTGGTACTGTATTA +
Preference number: 5 (lower is better)
Translates to: PSLHWFTLWRKLQNIQVVPAVVV*ILGTVL
Trigger: TAATACAGTACCAAGAATCAATACTACAACTGCAGG...TACCACTTGGATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTGAAGGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR CAA 90 bp ATCCATCCCTTCACTGGTTTACACTGTGGAGGAAGCTCCAAAATATCCAAGTGGTGCCAAAGTACTAGCTaGTTTGAGAAGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: IHPFTGLHCGGSSKISKWCQSTS*FEKYFC
Trigger: ACAGAAATACTTCTCAAACAAGCTAGTACTTTGGCA...CCACTTGGATATTTTGGAGCTTCCTCCACAGTGTAAACCAGTGAAGGGATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR CAA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACTGCCTTGGATTCTTCTaGAGGTTTGCCCACACATAC +
Preference number: 5 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYCLGFF*RFAHTY
Trigger: GTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGCA...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATGCCTTGGATTCTTCTaGAGGTTTGCCCACACATAC +
Preference number: 5 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSCLGFF*RFAHTY
Trigger: GTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGCA...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTTGCCTTGGATTCTTCTaGAGGTTTGCCCACACATAC +
Preference number: 5 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVCLGFF*RFAHTY
Trigger: GTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGCA...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TCTCTCGTTCACATTTTATGGCTTCAGATTCTTCCTCAGCAGAACTCATTTTCATGCCTTGGATTCTTCTaGAGGTTTGCCCACACATAC +
Preference number: 5 (lower is better)
Translates to: SLVHILWLQILPQQNSFSCLGFF*RFAHTY
Trigger: GTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGCA...TGAAAATGAGTTCTGCTGAGGAAGAATCTGAAGCCATAAAATGTGAACGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR CAA 90 bp AATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTGTACAGCAATGTCACTaGTTGCTAATATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: NMSILNQGNRAKGVQAECVQQCH*LLISLE
Trigger: TTCCAAGGATATTAGCAACAAGTGACATTGCTGTAC...ACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATTCTTTTGATGGTGTaGAAACAGGGTGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFILLMV*KQGAVQ
Trigger: CTGCACTGCACCCTGTTTCAACACCATCAAAAGAAT...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp ACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACCCTCTTTCTTGTTGTTaGGACTCTTCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: TLCCRNTCLSPCLVLHTYPLSCC*DSSSTS
Trigger: GGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAGG...GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAGACCCTCTTTCTTGTaGTTTGGACTCTTCTTCGAC +
Preference number: 5 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFRPSFL*FGLFFD
Trigger: GTCGAAGAAGAGTCCAAACAACAAGAAAGAGGGTCT...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CATGTGGCACACAGAGTTGACAAACTGACAGTTGGAACTCCTGACTTTCTCCATCACTTCAATATCACCTaGTTCCTCCTCAACTTTTAT +
Preference number: 5 (lower is better)
Translates to: HVAHRVDKLTVGTPDFLHHFNIT*FLLNFY
Trigger: ATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTG...ATGGAGAAAGTCAGGAGTTCCAACTGTCAGTTTGTCAACTCTGTGTGCCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354189.9
ENST00000554533.5
CDS-3UTR CAA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp CATGTTAATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTCCTGCAGTTGTAGTATaGATTCTTGGTACTGTATTA +
Preference number: 5 (lower is better)
Translates to: HVNMSILNQGNRAKGVQAPAVVV*ILGTVL
Trigger: TAATACAGTACCAAGAATCAATACTACAACTGCAGG...AGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATTAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp AATATGAGCATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTAAAGTACTAGCTTGTTaGAGAAGTATTTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: NMSILNQGNRAKGVQAECKVLAC*RSISVA
Trigger: AGCCACAGAAATACTTCTCAAACAAGCTAGTACTTT...ACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp ATCTTGAATCAAGGTAACAGGGCCAAAGGTGTCCAGGCTGAATGTTACAAGTCTTGCCAAAGTACTAGCTaGTTTGAGAAGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: ILNQGNRAKGVQAECYKSCQSTS*FEKYFC
Trigger: ACAGAAATACTTCTCAAACAAGCTAGTACTTTGGCA...AGACTTGTAACATTCAGCCTGGACACCTTTGGCCCTGTTACCTTGATTCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp ATAATGAAAGGAATAGGAGTCATCCAGGTTCCTTCCAAAATAGAGATGTGTTTCTGCCTTGGATTCTTCTaGAGGTTTGCCCACACATAC +
Preference number: 5 (lower is better)
Translates to: IMKGIGVIQVPSKIEMCFCLGFF*RFAHTY
Trigger: GTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGCA...GAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCTTTCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTTGCCTTGGATTCTTCTaGAGGTTTGCCCACACATAC +
Preference number: 5 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFCLGFF*RFAHTY
Trigger: GTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGCA...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATATGCCTTGGATTCTTCTaGAGGTTTGCCCACACATAC +
Preference number: 5 (lower is better)
Translates to: CVAEIPVFHHAWFFILTICLGFF*RFAHTY
Trigger: GTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGCA...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATTCTTTTGATGGTGTaGAAACAGGGTGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTILLMV*KQGAVQ
Trigger: CTGCACTGCACCCTGTTTCAACACCATCAAAAGAAT...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATATTCTTTTGATGGTGTaGAAACAGGGTGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHILLMV*KQGAVQ
Trigger: CTGCACTGCACCCTGTTTCAACACCATCAAAAGAAT...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGCCTCTTTCTTGTTGTTaGGACTCTTCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLPLSCC*DSSSTS
Trigger: GGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAGG...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCAGACCCTCTTTCTTGTaGTTTGGACTCTTCTTCGAC +
Preference number: 5 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFRPSFL*FGLFFD
Trigger: GTCGAAGAAGAGTCCAAACAACAAGAAAGAGGGTCT...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGACCCTCTTTCTTGTaGTTTGGACTCTTCTTCGAC +
Preference number: 5 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYRPSFL*FGLFFD
Trigger: GTCGAAGAAGAGTCCAAACAACAAGAAAGAGGGTCT...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAAGACCCTCTTTCTTGTaGTTTGGACTCTTCTTCGAC +
Preference number: 5 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSRPSFL*FGLFFD
Trigger: GTCGAAGAAGAGTCCAAACAACAAGAAAGAGGGTCT...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTGTGAGACCCTCTTTCTaGTTGTTTGGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SFTHYIVLQKYLSFTMLGVRPSF*LFGLFF
Trigger: GAAGAAGAGTCCAAACAACAAGAAAGAGGGTCTCAC...ACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACGTGAGACCCTCTTTCTaGTTGTTTGGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYVRPSF*LFGLFF
Trigger: GAAGAAGAGTCCAAACAACAAGAAAGAGGGTCTCAC...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACGTGAGACCCTCTTTCTaGTTGTTTGGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TLCCRNTCLSPCLVLHTYVRPSF*LFGLFF
Trigger: GAAGAAGAGTCCAAACAACAAGAAAGAGGGTCTCAC...GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TCTCTCGTTCACATTTTATGGCTTCAGATTCTTCCTCAGCAGAACTCATTTTCAGTGAGACCCTCTTTCTaGTTGTTTGGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLVHILWLQILPQQNSFSVRPSF*LFGLFF
Trigger: GAAGAAGAGTCCAAACAACAAGAAAGAGGGTCTCAC...TGAAAATGAGTTCTGCTGAGGAAGAATCTGAAGCCATAAAATGTGAACGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR CAA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATGTGAGACCCTCTTTCTaGTTGTTTGGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHVRPSF*LFGLFF
Trigger: GAAGAAGAGTCCAAACAACAAGAAAGAGGGTCTCAC...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCGTTAATATGAGCATCTaGAATCAAGGTAACAGGGCC +
Preference number: 5 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFVNMSI*NQGNRA
Trigger: GGCCCTGTTACCTTGATTCAAGATGCTCATATTAAC...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCCTTACTGCCAGATCTTaGGCCACTGAAGCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTLTARS*ATEACL
Trigger: CAAACAGGCTTCAGTGGCCAAAGATCTGGCAGTAAG...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395990.6
CDS CCA 90 bp TATGAGTTATTTCCCAAACCGACCCGCTTCGCTGTAAAATATGACTaGCTCTTGATTACATTATTTAACACTGGTGAAGCAGAATCAGTG +
Preference number: 5 (lower is better)
Translates to: YELFPKPTRFAVKYD*LLITLFNTGEAESV
Trigger: CACTGATTCTGCTTCACCAGTGTTAAATAATGTAATCAAGAGCCAGTCATATTTTACAGCGAAGCGGGTCGGTTTGGGAAATAACTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354189.9
CDS-3UTR CAA 90 bp AAACTAATAAACGTGTTCATTTCTTGGGCTACTGAAGGATCAGGACTCCCATCATCCTTTCTAGATCTTTaGCTTCAAGTCGATGCCATT +
Preference number: 5 (lower is better)
Translates to: KLINVFISWATEGSGLPSSFLDL*LQVDAI
Trigger: AATGGCATCGACTTGAAGCAAAAGATCTAGAAAGGA...TGATGGGAGTCCTGATCCTTCAGTAGCCCAAGAAATGAACACGTTTATTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556467.5
CDS-3UTR CAA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCTCCTTTCTAGATCTTTaGCTTCAAGTCGATGCCATT +
Preference number: 5 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFSFLDL*LQVDAI
Trigger: AATGGCATCGACTTGAAGCAAAAGATCTAGAAAGGA...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAGGACTCCCATCACATaGAATGTAGTGCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCRTPIT*NVVLPL
Trigger: CAGTGGAAGCACTACATTCAATGTGATGGGAGTCCT...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCTGCCTTGGATTCTTCTaGAGGTTTGCCCACACATAC +
Preference number: 5 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTCLGFF*RFAHTY
Trigger: GTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGCA...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAATTCTTTTGATGGTGTaGAAACAGGGTGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTILLMV*KQGAVQ
Trigger: CTGCACTGCACCCTGTTTCAACACCATCAAAAGAAT...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATAATTCTTTTGATGGTGTaGAAACAGGGTGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: CVAEIPVFHHAWFFILTIILLMV*KQGAVQ
Trigger: CTGCACTGCACCCTGTTTCAACACCATCAAAAGAAT...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ACATCATCTTTGACAAGCTCAGTTACTGCAGAAGTGTATTCTTTTGATGGTGTTATTCTTTTGATGGTGTaGAAACAGGGTGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: TSSLTSSVTAEVYSFDGVILLMV*KQGAVQ
Trigger: CTGCACTGCACCCTGTTTCAACACCATCAAAAGAAT...AACACCATCAAAAGAATACACTTCTGCAGTAACTGAGCTTGTCAAAGATGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR CAA 90 bp TTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTATTCTTTTGATGGTGTaGAAACAGGGTGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: LQKYLSFTMLGSSYLQYSILLMV*KQGAVQ
Trigger: CTGCACTGCACCCTGTTTCAACACCATCAAAAGAAT...ACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATTCTTCTTCGACCTCCTaGCTGATTGCTTTTTCTACA +
Preference number: 5 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHSSSTS*LIAFST
Trigger: TGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGA...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATCTTCTTCGACCTCCTaGCTGATTGCTTTTTCTACA +
Preference number: 5 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSSSSTS*LIAFST
Trigger: TGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGA...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTCTTCTTCGACCTCCTaGCTGATTGCTTTTTCTACA +
Preference number: 5 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFSSSTS*LIAFST
Trigger: TGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGA...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACATCTTCTTCGACCTCCTaGCTGATTGCTTTTTCTACA +
Preference number: 5 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTSSSTS*LIAFST
Trigger: TGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGA...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTCTTCTTCGACCTCCTaGCTGATTGCTTTTTCTACA +
Preference number: 5 (lower is better)
Translates to: FIHSLHCVAEIPVFHHAWSSSTS*LIAFST
Trigger: TGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGA...CCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp ATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCCTCTTTCTTGTTGTTaGGACTCTTCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: MYSFTHYIVLQKYLSFTMPLSCC*DSSSTS
Trigger: GGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAGG...CATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCCCTCTTTCTTGTTGTTaGGACTCTTCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTPLSCC*DSSSTS
Trigger: GGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAGG...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTCCTCTTTCTTGTTGTTaGGACTCTTCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCPLSCC*DSSSTS
Trigger: GGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAGG...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGCCTCTTTCTTGTTGTTaGGACTCTTCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKPLSCC*DSSSTS
Trigger: GGAGGTCGAAGAAGAGTCCAAACAACAAGAAAGAGG...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTAGACCCTCTTTCTTGTaGTTTGGACTCTTCTTCGAC +
Preference number: 5 (lower is better)
Translates to: VFIHSLHCVAEIPVFHHARPSFL*FGLFFD
Trigger: GTCGAAGAAGAGTCCAAACAACAAGAAAGAGGGTCT...AGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATAAGACCCTCTTTCTTGTaGTTTGGACTCTTCTTCGAC +
Preference number: 5 (lower is better)
Translates to: CVAEIPVFHHAWFFILTIRPSFL*FGLFFD
Trigger: GTCGAAGAAGAGTCCAAACAACAAGAAAGAGGGTCT...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTGAGACCCTCTTTCTaGTTGTTTGGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTVRPSF*LFGLFF
Trigger: GAAGAAGAGTCCAAACAACAAGAAAGAGGGTCTCAC...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGGTTAATATGAGCATCTaGAATCAAGGTAACAGGGCC +
Preference number: 5 (lower is better)
Translates to: VAEIPVFHHAWFFILTIQVNMSI*NQGNRA
Trigger: GGCCCTGTTACCTTGATTCAAGATGCTCATATTAAC...CTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACGTTAATATGAGCATCTaGAATCAAGGTAACAGGGCC +
Preference number: 5 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYVNMSI*NQGNRA
Trigger: GGCCCTGTTACCTTGATTCAAGATGCTCATATTAAC...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCGTTAATATGAGCATCTaGAATCAAGGTAACAGGGCC +
Preference number: 5 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFVNMSI*NQGNRA
Trigger: GGCCCTGTTACCTTGATTCAAGATGCTCATATTAAC...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp GTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGCTTGATCTTCAGTCTTaGTGCTCTGTCACCACTAAA +
Preference number: 5 (lower is better)
Translates to: VAEIPVFHHAWFFILTIQLDLQS*CSVTTK
Trigger: TTTAGTGGTGACAGAGCACAAAGACTGAAGATCAAG...CTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGCTTGATCTTCAGTCTTaGTGCTCTGTCACCACTAAA +
Preference number: 5 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWLDLQS*CSVTTK
Trigger: TTTAGTGGTGACAGAGCACAAAGACTGAAGATCAAG...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACACTTGATCTTCAGTCTTaGTGCTCTGTCACCACTAAA +
Preference number: 5 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTLDLQS*CSVTTK
Trigger: TTTAGTGGTGACAGAGCACAAAGACTGAAGATCAAG...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACCTTGATCTTCAGTCTTaGTGCTCTGTCACCACTAAA +
Preference number: 5 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYLDLQS*CSVTTK
Trigger: TTTAGTGGTGACAGAGCACAAAGACTGAAGATCAAG...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GTATGCAGGAGTCGTACAGCAATGTCACTTGTTGCTAATATCCTTGGAATCTCATGTCTTTCACCATGCTaGGTTCTTCATACTTACAAT +
Preference number: 5 (lower is better)
Translates to: VCRSRTAMSLVANILGISCLSPC*VLHTYN
Trigger: ATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACA...TGAGATTCCAAGGATATTAGCAACAAGTGACATTGCTGTACGACTCCTGCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR CAA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTACTGCCAGACTTTTTaGCTTTGGGACCCATTAAGA +
Preference number: 5 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFYCQTF*LWDPLR
Trigger: TCTTAATGGGTCCCAAAGCAAAAAAGTCTGGCAGTA...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395987.8
CDS-3UTR CAA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCGACAGTGTTCCTTTTTaGCTTTGGGACCCATTAAGA +
Preference number: 5 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFDSVPF*LWDPLR
Trigger: TCTTAATGGGTCCCAAAGCAAAAAAGGAACACTGTC...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395990.6
CDS-3UTR CAA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATTCCTCAGCAGAACTTTaGAGAAGTATTTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHSSAEL*RSISVA
Trigger: AGCCACAGAAATACTTCTCAAAAGTTCTGCTGAGGA...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556006.6
CDS TCA 90 bp GCAGAACTTTTGAGAAGTATTTCTGTGGCTACACCGAATTTAAGATaGAGGAGCTCCTGCAGTTGTAGTATTGATTCTTGGTACTGTATT +
Preference number: 5 (lower is better)
Translates to: AELLRSISVATPNLR*RSSCSCSIDSWYCI
Trigger: AATACAGTACCAAGAATCAATACTACAACTGCAGGAGCTCCTTCATCTTAAATTCGGTGTAGCCACAGAAATACTTCTCAAAAGTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556006.6
CDS-3UTR CAA 90 bp TTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTCCTTTCTAGATCTTTaGCTTCAAGTCGATGCCATT +
Preference number: 5 (lower is better)
Translates to: FIHSLHCVAEIPVFHHAWSFLDL*LQVDAI
Trigger: AATGGCATCGACTTGAAGCAAAAGATCTAGAAAGGA...CCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp GTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTCCTTTCTAGATCTTTaGCTTCAAGTCGATGCCATT +
Preference number: 5 (lower is better)
Translates to: VAEIPVFHHAWFFILTIQSFLDL*LQVDAI
Trigger: AATGGCATCGACTTGAAGCAAAAGATCTAGAAAGGA...CTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGTCCTTTCTAGATCTTTaGCTTCAAGTCGATGCCATT +
Preference number: 5 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWSFLDL*LQVDAI
Trigger: AATGGCATCGACTTGAAGCAAAAGATCTAGAAAGGA...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAAAGTACTAGCTTGTTaGAGAAGTATTTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFKVLAC*RSISVA
Trigger: AGCCACAGAAATACTTCTCAAACAAGCTAGTACTTT...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATCAGCAATGTCACTTGTaGCTAATATCCTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHQQCHL*LISLES
Trigger: AGATTCCAAGGATATTAGCAACAAGTGACATTGCTG...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCCAGCAATGTCACTTGTaGCTAATATCCTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFQQCHL*LISLES
Trigger: AGATTCCAAGGATATTAGCAACAAGTGACATTGCTG...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCAGCAATGTCACTTGTaGCTAATATCCTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVQQCHL*LISLES
Trigger: AGATTCCAAGGATATTAGCAACAAGTGACATTGCTG...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATGTACAGCAATGTCACTaGTTGCTAATATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHVQQCH*LLISLE
Trigger: TTCCAAGGATATTAGCAACAAGTGACATTGCTGTAC...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGATTCTTTTGATGGTGTaGAAACAGGGTGCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKILLMV*KQGAVQ
Trigger: CTGCACTGCACCCTGTTTCAACACCATCAAAAGAAT...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGCAGAAGTGTATTCTTTaGATGGTGTTGAAACAGGGT +
Preference number: 5 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWQKCIL*MVLKQG
Trigger: ACCCTGTTTCAACACCATCAAAAGAATACACTTCTG...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTCAGAAGTGTATTCTTTaGATGGTGTTGAAACAGGGT +
Preference number: 5 (lower is better)
Translates to: SFTHYIVLQKYLSFTMLGQKCIL*MVLKQG
Trigger: ACCCTGTTTCAACACCATCAAAAGAATACACTTCTG...ACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCTTCTTAACATCATCTTaGACAAGCTCAGTTACTGCA +
Preference number: 5 (lower is better)
Translates to: HSLHCVAEIPVFHHAWFFFLTSS*TSSVTA
Trigger: TGCAGTAACTGAGCTTGTCAAAGATGATGTTAAGAA...GAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTTCTTCTTCGACCTCCTaGCTGATTGCTTTTTCTACA +
Preference number: 5 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILSSSTS*LIAFST
Trigger: TGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGA...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTTCTTCTTCGACCTCCTaGCTGATTGCTTTTTCTACA +
Preference number: 5 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFSSSTS*LIAFST
Trigger: TGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGA...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGAGACCCTCTTTCTTGTaGTTTGGACTCTTCTTCGAC +
Preference number: 5 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKRPSFL*FGLFFD
Trigger: GTCGAAGAAGAGTCCAAACAACAAGAAAGAGGGTCT...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGTGAGACCCTCTTTCTaGTTGTTTGGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLVRPSF*LFGLFF
Trigger: GAAGAAGAGTCCAAACAACAAGAAAGAGGGTCTCAC...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTAGTTAATATGAGCATCTaGAATCAAGGTAACAGGGCC +
Preference number: 5 (lower is better)
Translates to: YIVLQKYLSFTMLGSSYLVNMSI*NQGNRA
Trigger: GGCCCTGTTACCTTGATTCAAGATGCTCATATTAAC...TAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp TTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTGTTAATATGAGCATCTaGAATCAAGGTAACAGGGCC +
Preference number: 5 (lower is better)
Translates to: LQKYLSFTMLGSSYLQYSVNMSI*NQGNRA
Trigger: GGCCCTGTTACCTTGATTCAAGATGCTCATATTAAC...ACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACACTTGATCTTCAGTCTTaGTGCTCTGTCACCACTAAA +
Preference number: 5 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTLDLQS*CSVTTK
Trigger: TTTAGTGGTGACAGAGCACAAAGACTGAAGATCAAG...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTCCTTTCTAGATCTTTaGCTTCAAGTCGATGCCATT +
Preference number: 5 (lower is better)
Translates to: LQKYLSFTMLGSSYLQYSSFLDL*LQVDAI
Trigger: AATGGCATCGACTTGAAGCAAAAGATCTAGAAAGGA...ACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTTCCTTTCTAGATCTTTaGCTTCAAGTCGATGCCATT +
Preference number: 5 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFSFLDL*LQVDAI
Trigger: AATGGCATCGACTTGAAGCAAAAGATCTAGAAAGGA...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGCCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: VAEIPVFHHAWFFILTIQPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...CTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACCCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCCCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACACCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGCCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCCTGCAGTTGTAGTATaGATTCTTGGTACTGTATTA +
Preference number: 5 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVPAVVV*ILGTVL
Trigger: TAATACAGTACCAAGAATCAATACTACAACTGCAGG...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGCCTGCAGTTGTAGTATaGATTCTTGGTACTGTATTA +
Preference number: 5 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWPAVVV*ILGTVL
Trigger: TAATACAGTACCAAGAATCAATACTACAACTGCAGG...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACCCTGCAGTTGTAGTATaGATTCTTGGTACTGTATTA +
Preference number: 5 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYPAVVV*ILGTVL
Trigger: TAATACAGTACCAAGAATCAATACTACAACTGCAGG...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCACCTGCAGTTGTAGTATaGATTCTTGGTACTGTATTA +
Preference number: 5 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSPAVVV*ILGTVL
Trigger: TAATACAGTACCAAGAATCAATACTACAACTGCAGG...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp TCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTAAAGTACTAGCTTGTTaGAGAAGTATTTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: SFTHYIVLQKYLSFTMLGKVLAC*RSISVA
Trigger: AGCCACAGAAATACTTCTCAAACAAGCTAGTACTTT...ACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTAAAGTACTAGCTTGTTaGAGAAGTATTTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVKVLAC*RSISVA
Trigger: AGCCACAGAAATACTTCTCAAACAAGCTAGTACTTT...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCAAAAGTACTAGCTTGTTaGAGAAGTATTTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSKVLAC*RSISVA
Trigger: AGCCACAGAAATACTTCTCAAACAAGCTAGTACTTT...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAAAAGTACTAGCTTGTTaGAGAAGTATTTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTKVLAC*RSISVA
Trigger: AGCCACAGAAATACTTCTCAAACAAGCTAGTACTTT...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAAAGTACTAGCTTGTTaGAGAAGTATTTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYKVLAC*RSISVA
Trigger: AGCCACAGAAATACTTCTCAAACAAGCTAGTACTTT...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp CATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTTGCCAAAGTACTAGCTaGTTTGAGAAGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: HSLITLCCRNTCLSPCLVCQSTS*FEKYFC
Trigger: ACAGAAATACTTCTCAAACAAGCTAGTACTTTGGCA...AACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp ACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACTGCCAAAGTACTAGCTaGTTTGAGAAGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: TLCCRNTCLSPCLVLHTYCQSTS*FEKYFC
Trigger: ACAGAAATACTTCTCAAACAAGCTAGTACTTTGGCA...GTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGATGCCAAAGTACTAGCTaGTTTGAGAAGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: PVFHHAWFFILTIQFVSGCQSTS*FEKYFC
Trigger: ACAGAAATACTTCTCAAACAAGCTAGTACTTTGGCA...TCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTGCCAAAGTACTAGCTaGTTTGAGAAGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFCQSTS*FEKYFC
Trigger: ACAGAAATACTTCTCAAACAAGCTAGTACTTTGGCA...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp ACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATGCCAAAGTACTAGCTaGTTTGAGAAGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: THYIVLQKYLSFTMLGSSCQSTS*FEKYFC
Trigger: ACAGAAATACTTCTCAAACAAGCTAGTACTTTGGCA...TGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp GTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTGCCAAAGTACTAGCTaGTTTGAGAAGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: VAEIPVFHHAWFFILTIQCQSTS*FEKYFC
Trigger: ACAGAAATACTTCTCAAACAAGCTAGTACTTTGGCA...CTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTCAGCAATGTCACTTGTaGCTAATATCCTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFQQCHL*LISLES
Trigger: AGATTCCAAGGATATTAGCAACAAGTGACATTGCTG...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACACAGCAATGTCACTTGTaGCTAATATCCTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTQQCHL*LISLES
Trigger: AGATTCCAAGGATATTAGCAACAAGTGACATTGCTG...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTGTACAGCAATGTCACTaGTTGCTAATATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: CRNTCLSPCLVLHTYNTVVQQCH*LLISLE
Trigger: TTCCAAGGATATTAGCAACAAGTGACATTGCTGTAC...AACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp CAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGGTACAGCAATGTCACTaGTTGCTAATATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: QKYLSFTMLGSSYLQYSLVQQCH*LLISLE
Trigger: TTCCAAGGATATTAGCAACAAGTGACATTGCTGTAC...CAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTACAGCAATGTCACTaGTTGCTAATATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFVQQCH*LLISLE
Trigger: TTCCAAGGATATTAGCAACAAGTGACATTGCTGTAC...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTGTACAGCAATGTCACTaGTTGCTAATATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILVQQCH*LLISLE
Trigger: TTCCAAGGATATTAGCAACAAGTGACATTGCTGTAC...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTCAGAAGTGTATTCTTTaGATGGTGTTGAAACAGGGT +
Preference number: 5 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILQKCIL*MVLKQG
Trigger: ACCCTGTTTCAACACCATCAAAAGAATACACTTCTG...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTCAGAAGTGTATTCTTTaGATGGTGTTGAAACAGGGT +
Preference number: 5 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFQKCIL*MVLKQG
Trigger: ACCCTGTTTCAACACCATCAAAAGAATACACTTCTG...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATAATGAAAGGAATAGGAGTCATCCAGGTTCCTTCCAAAATAGAGATGTGTTTCCAGAAGTGTATTCTTTaGATGGTGTTGAAACAGGGT +
Preference number: 5 (lower is better)
Translates to: IMKGIGVIQVPSKIEMCFQKCIL*MVLKQG
Trigger: ACCCTGTTTCAACACCATCAAAAGAATACACTTCTG...GAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCTTTCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp GTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTCTTAACATCATCTTaGACAAGCTCAGTTACTGCA +
Preference number: 5 (lower is better)
Translates to: VAEIPVFHHAWFFILTIQFLTSS*TSSVTA
Trigger: TGCAGTAACTGAGCTTGTCAAAGATGATGTTAAGAA...CTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TGGAATCTCAAATCCAATTTGTGTTTCAGAGAATCTAACACTTCTGTGCCTTGGTTCTTAACATCATCTTaGACAAGCTCAGTTACTGCA +
Preference number: 5 (lower is better)
Translates to: WNLKSNLCFRESNTSVPWFLTSS*TSSVTA
Trigger: TGCAGTAACTGAGCTTGTCAAAGATGATGTTAAGAA...CCAAGGCACAGAAGTGTTAGATTCTCTGAAACACAAATTGGATTTGAGATTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554533.5
CDS-3UTR CAA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTCTTCTTCGACCTCCTaGCTGATTGCTTTTTCTACA +
Preference number: 5 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKSSSTS*LIAFST
Trigger: TGTAGAAAAAGCAATCAGCAAGGAGGTCGAAGAAGA...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGCACTTCAATATCACCTaGTTCCTCCTCAACTTTTAT +
Preference number: 5 (lower is better)
Translates to: TCLSPCLVLHTYNTVCKWHFNIT*FLLNFY
Trigger: ATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTG...CCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGCACTTCAATATCACCTaGTTCCTCCTCAACTTTTAT +
Preference number: 5 (lower is better)
Translates to: FIHSLHCVAEIPVFHHAWHFNIT*FLLNFY
Trigger: ATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTG...CCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp CCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGGACACTTCAATATCACCTaGTTCCTCCTCAACTTTTAT +
Preference number: 5 (lower is better)
Translates to: PVFHHAWFFILTIQFVSGHFNIT*FLLNFY
Trigger: ATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTG...TCCACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGTTAATATGAGCATCTaGAATCAAGGTAACAGGGCC +
Preference number: 5 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLVNMSI*NQGNRA
Trigger: GGCCCTGTTACCTTGATTCAAGATGCTCATATTAAC...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCGTTAATATGAGCATCTaGAATCAAGGTAACAGGGCC +
Preference number: 5 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTVNMSI*NQGNRA
Trigger: GGCCCTGTTACCTTGATTCAAGATGCTCATATTAAC...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGCTTGATCTTCAGTCTTaGTGCTCTGTCACCACTAAA +
Preference number: 5 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKLDLQS*CSVTTK
Trigger: TTTAGTGGTGACAGAGCACAAAGACTGAAGATCAAG...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGATCTTCAGTCTTaGTGCTCTGTCACCACTAAA +
Preference number: 5 (lower is better)
Translates to: MYSFTHYIVLQKYLSFTMLDLQS*CSVTTK
Trigger: TTTAGTGGTGACAGAGCACAAAGACTGAAGATCAAG...CATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp TTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTGTCTTTCACCATGCTaGGTTCTTCATACTTACAAT +
Preference number: 5 (lower is better)
Translates to: FIHSLHCVAEIPVFHHAWCLSPC*VLHTYN
Trigger: ATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACA...CCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp CTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATTGTCTTTCACCATGCTaGGTTCTTCATACTTACAAT +
Preference number: 5 (lower is better)
Translates to: LITLCCRNTCLSPCLVLHCLSPC*VLHTYN
Trigger: ATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACA...ATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp TCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTCATTCACTCATTACATaGTGTTGCAGAAATACCTGT +
Preference number: 5 (lower is better)
Translates to: SFTHYIVLQKYLSFTMLGHSLIT*CCRNTC
Trigger: ACAGGTATTTCTGCAACACAATGTAATGAGTGAATG...ACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp GTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACCATTCACTCATTACATaGTGTTGCAGAAATACCTGT +
Preference number: 5 (lower is better)
Translates to: VLQKYLSFTMLGSSYLQYHSLIT*CCRNTC
Trigger: ACAGGTATTTCTGCAACACAATGTAATGAGTGAATG...GTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp ATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCCATTCACTCATTACATaGTGTTGCAGAAATACCTGT +
Preference number: 5 (lower is better)
Translates to: IHSLHCVAEIPVFHHAWFHSLIT*CCRNTC
Trigger: ACAGGTATTTCTGCAACACAATGTAATGAGTGAATG...GAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp CATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACACATTCACTCATTACATaGTGTTGCAGAAATACCTGT +
Preference number: 5 (lower is better)
Translates to: HCVAEIPVFHHAWFFILTHSLIT*CCRNTC
Trigger: ACAGGTATTTCTGCAACACAATGTAATGAGTGAATG...TGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACACCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTCCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: LQKYLSFTMLGSSYLQYSPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...ACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATAATGAAAGGAATAGGAGTCATCCAGGTTCCTTCCAAAATAGAGATGTGTTTCCCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: IMKGIGVIQVPSKIEMCFPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...GAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCTTTCATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp TGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTCCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: CRNTCLSPCLVLHTYNTVPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...AACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACCTGCAGTTGTAGTATaGATTCTTGGTACTGTATTA +
Preference number: 5 (lower is better)
Translates to: CVAEIPVFHHAWFFILTIPAVVV*ILGTVL
Trigger: TAATACAGTACCAAGAATCAATACTACAACTGCAGG...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTCCTGCAGTTGTAGTATaGATTCTTGGTACTGTATTA +
Preference number: 5 (lower is better)
Translates to: CRNTCLSPCLVLHTYNTVPAVVV*ILGTVL
Trigger: TAATACAGTACCAAGAATCAATACTACAACTGCAGG...AACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTAAAAGTACTAGCTTGTTaGAGAAGTATTTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: YIVLQKYLSFTMLGSSYLKVLAC*RSISVA
Trigger: AGCCACAGAAATACTTCTCAAACAAGCTAGTACTTT...TAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTTGCCAAAGTACTAGCTaGTTTGAGAAGTATTTCTGT +
Preference number: 5 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILCQSTS*FEKYFC
Trigger: ACAGAAATACTTCTCAAACAAGCTAGTACTTTGGCA...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGTACAGCAATGTCACTaGTTGCTAATATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLVQQCH*LLISLE
Trigger: TTCCAAGGATATTAGCAACAAGTGACATTGCTGTAC...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTGTACAGCAATGTCACTaGTTGCTAATATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCVQQCH*LLISLE
Trigger: TTCCAAGGATATTAGCAACAAGTGACATTGCTGTAC...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGGTACAGCAATGTCACTaGTTGCTAATATCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKVQQCH*LLISLE
Trigger: TTCCAAGGATATTAGCAACAAGTGACATTGCTGTAC...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp AGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTCAGAAGTGTATTCTTTaGATGGTGTTGAAACAGGGT +
Preference number: 5 (lower is better)
Translates to: RNTCLSPCLVLHTYNTVCQKCIL*MVLKQG
Trigger: ACCCTGTTTCAACACCATCAAAAGAATACACTTCTG...ACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTCAGAAGTGTATTCTTTaGATGGTGTTGAAACAGGGT +
Preference number: 5 (lower is better)
Translates to: IPVFHHAWFFILTIQFVSQKCIL*MVLKQG
Trigger: ACCCTGTTTCAACACCATCAAAAGAATACACTTCTG...ACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTTTCTTAACATCATCTTaGACAAGCTCAGTTACTGCA +
Preference number: 5 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFFLTSS*TSSVTA
Trigger: TGCAGTAACTGAGCTTGTCAAAGATGATGTTAAGAA...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATAATGAAAGGAATAGGAGTCATCCAGGTTCCTTCCAAAATAGAGATGTGTTTCTTCTTAACATCATCTTaGACAAGCTCAGTTACTGCA +
Preference number: 5 (lower is better)
Translates to: IMKGIGVIQVPSKIEMCFFLTSS*TSSVTA
Trigger: TGCAGTAACTGAGCTTGTCAAAGATGATGTTAAGAA...GAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCTTTCATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp TGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTTCTTAACATCATCTTaGACAAGCTCAGTTACTGCA +
Preference number: 5 (lower is better)
Translates to: CRNTCLSPCLVLHTYNTVFLTSS*TSSVTA
Trigger: TGCAGTAACTGAGCTTGTCAAAGATGATGTTAAGAA...AACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACATTCTTAACATCATCTTaGACAAGCTCAGTTACTGCA +
Preference number: 5 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTFLTSS*TSSVTA
Trigger: TGCAGTAACTGAGCTTGTCAAAGATGATGTTAAGAA...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTCACTTCAATATCACCTaGTTCCTCCTCAACTTTTAT +
Preference number: 5 (lower is better)
Translates to: AEIPVFHHAWFFILTIQFHFNIT*FLLNFY
Trigger: ATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTG...AAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATAATGAAAGGAATAGGAGTCATCCAGGTTCCTTCCAAAATAGAGATGTGTTTCCACTTCAATATCACCTaGTTCCTCCTCAACTTTTAT +
Preference number: 5 (lower is better)
Translates to: IMKGIGVIQVPSKIEMCFHFNIT*FLLNFY
Trigger: ATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTG...GAAACACATCTCTATTTTGGAAGGAACCTGGATGACTCCTATTCCTTTCATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554533.5
ENST00000557684.6
CDS-3UTR CAA 90 bp TGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACACACTTCAATATCACCTaGTTCCTCCTCAACTTTTAT +
Preference number: 5 (lower is better)
Translates to: CCRNTCLSPCLVLHTYNTHFNIT*FLLNFY
Trigger: ATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTG...TGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTTGTCTTTCACCATGCTaGGTTCTTCATACTTACAAT +
Preference number: 5 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILCLSPC*VLHTYN
Trigger: ATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACA...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp TTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTCATTCACTCATTACATaGTGTTGCAGAAATACCTGT +
Preference number: 5 (lower is better)
Translates to: LHCVAEIPVFHHAWFFILHSLIT*CCRNTC
Trigger: ACAGGTATTTCTGCAACACAATGTAATGAGTGAATG...AAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp TGTGTTGCAGAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACATTCACTCATTACATaGTGTTGCAGAAATACCTGT +
Preference number: 5 (lower is better)
Translates to: CVAEIPVFHHAWFFILTIHSLIT*CCRNTC
Trigger: ACAGGTATTTCTGCAACACAATGTAATGAGTGAATG...TATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTCTGCAACACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTCCTCAAAAGTCTCATTaGTTTTCTCTTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLPQKSH*FSLSTN
Trigger: GTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGG...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp ATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCCTGCAGTTGTAGTATaGATTCTTGGTACTGTATTA +
Preference number: 5 (lower is better)
Translates to: MYSFTHYIVLQKYLSFTMPAVVV*ILGTVL
Trigger: TAATACAGTACCAAGAATCAATACTACAACTGCAGG...CATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS-3UTR CAA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCTTCTTAACATCATCTTaGACAAGCTCAGTTACTGCA +
Preference number: 5 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTFLTSS*TSSVTA
Trigger: TGCAGTAACTGAGCTTGTCAAAGATGATGTTAAGAA...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp TATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCATGCTTTTCTTAACATCATCTTaGACAAGCTCAGTTACTGCA +
Preference number: 5 (lower is better)
Translates to: YSFTHYIVLQKYLSFTMLFLTSS*TSSVTA
Trigger: TGCAGTAACTGAGCTTGTCAAAGATGATGTTAAGAA...AAGCATGGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp GAAATGTATTCATTCACTCATTACATTGTGTTGCAGAAATACCTGTCTTTCACCCACTTCAATATCACCTaGTTCCTCCTCAACTTTTAT +
Preference number: 5 (lower is better)
Translates to: EMYSFTHYIVLQKYLSFTHFNIT*FLLNFY
Trigger: ATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTG...GGTGAAAGACAGGTATTTCTGCAACACAATGTAATGAGTGAATGAATACATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
CDS-3UTR CAA 90 bp ATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTCACTTCAATATCACCTaGTTCCTCCTCAACTTTTAT +
Preference number: 5 (lower is better)
Translates to: IPVFHHAWFFILTIQFVSHFNIT*FLLNFY
Trigger: ATAAAAGTTGAGGAGGAACAAGGTGATATTGAAGTG...ACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp GAAATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTATGTCTTTCACCATGCTaGGTTCTTCATACTTACAAT +
Preference number: 5 (lower is better)
Translates to: EIPVFHHAWFFILTIQFVCLSPC*VLHTYN
Trigger: ATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACA...TACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp AATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTGTCTTTCACCATGCTaGGTTCTTCATACTTACAAT +
Preference number: 5 (lower is better)
Translates to: NTCLSPCLVLHTYNTVCKCLSPC*VLHTYN
Trigger: ATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACA...CTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS-3UTR CAA 90 bp ATACCTGTCTTTCACCATGCTTGGTTCTTCATACTTACAATACAGTTTGTAAGTCATTCACTCATTACATaGTGTTGCAGAAATACCTGT +
Preference number: 5 (lower is better)
Translates to: IPVFHHAWFFILTIQFVSHSLIT*CCRNTC
Trigger: ACAGGTATTTCTGCAACACAATGTAATGAGTGAATG...ACTTACAAACTGTATTGTAAGTATGAAGAACCAAGCATGGTGAAAGACAGGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320267.13
ENST00000354189.9
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000554533.5
ENST00000556006.6
ENST00000674567.1
CDS TCA 72 bp CCATTGCTGAGAAGAGGGCCGACCCACCCCAAGGTATaGGTTATTTCCCAAACCGACCCGCTTCGCTGTAAA +
Preference number: 6 (lower is better)
Translates to: PLLRRGPTHPKV*VISQTDPLRCK
Trigger: TTTACAGCGAAGCGGGTCGGTTTGGGAAATAACTCATACCTTGGGGTGGGTCGGCCCTCTTCTCAGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354189.9
CDS GCA 72 bp TTCAAACGGGCTTCCTCATTAAGAGTCAAGCTCCACTaGAGTAGTCCGCAGAGTCGGAGCAGAAATTGTGTG +
Preference number: 6 (lower is better)
Translates to: FKRASSLRVKLH*SSPQSRSRNCV
Trigger: CACACAATTTCTGCTCCGACTCTGCGGACTACTGCAGTGGAGCTTGACTCTTAATGAGGAAGCCCGTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674567.1
CDS GCA 72 bp TTTTTGCTTTGGGACCCATTAAGAGTCAAGCTCCACTaGAGTAGTCCGCAGAGTCGGAGCAGAAATTGTGTG +
Preference number: 6 (lower is better)
Translates to: FLLWDPLRVKLH*SSPQSRSRNCV
Trigger: CACACAATTTCTGCTCCGACTCTGCGGACTACTGCAGTGGAGCTTGACTCTTAATGGGTCCCAAAGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395987.8
ENST00000395990.6
CDS CAA 90 bp AGTCGTCTCTCCTCCTCCTCTTGTAGCAGCTTCAATCGTTCAGCTTaGGTGACTTTCTTTTTCTTACTGCCAGATCTTTGGCCACTGAAG +
Preference number: 6 (lower is better)
Translates to: SRLSSSSCSSFNRSA*VTFFFLLPDLWPLK
Trigger: CTTCAGTGGCCAAAGATCTGGCAGTAAGAAAAAGAAAGTCACCAAAGCTGAACGATTGAAGCTGCTACAAGAGGAGGAGGAGAGACGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395990.6
CDS CAA 90 bp AGTCGTCTCTCCTCCTCCTCTTGTAGCAGCTTCAATCGTTCAGCTTaGGTGACTTTCTTTTTCTTACTGCCAGACTCATTTGCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: SRLSSSSCSSFNRSA*VTFFFLLPDSFALL
Trigger: GAGCAAGGCAAATGAGTCTGGCAGTAAGAAAAAGAAAGTCACCAAAGCTGAACGATTGAAGCTGCTACAAGAGGAGGAGGAGAGACGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555240.1
CDS GCA 72 bp TTTTCTTACTGCCAGACATTAAGAGTCAAGCTCCACTaGAGTAGTCCGCAGAGTCGGAGCAGAAATTGTGTG +
Preference number: 6 (lower is better)
Translates to: FSYCQTLRVKLH*SSPQSRSRNCV
Trigger: CACACAATTTCTGCTCCGACTCTGCGGACTACTGCAGTGGAGCTTGACTCTTAATGTCTGGCAGTAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320267.13
ENST00000554533.5
ENST00000556467.5
ENST00000556547.5
CDS CAA 90 bp AGTCGTCTCTCCTCCTCCTCTTGTAGCAGCTTCAATCGTTCAGCTTaGGTGACTTTCTTTTTCTTACTGCCAGACATTAAGAGTCAAGCT +
Preference number: 6 (lower is better)
Translates to: SRLSSSSCSSFNRSA*VTFFFLLPDIKSQA
Trigger: AGCTTGACTCTTAATGTCTGGCAGTAAGAAAAAGAAAGTCACCAAAGCTGAACGATTGAAGCTGCTACAAGAGGAGGAGGAGAGACGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320267.13
ENST00000554533.5
ENST00000556467.5
ENST00000556547.5
ENST00000557684.6
ENST00000676236.1
CDS CAA 90 bp TTATTTCCCAAACCGACCCGCTTCGCTGTAAAATATGACTGGCTCTaGATTACATTATTTAACACTGGTGAAGCAGAATCAGTGGTCGCC +
Preference number: 6 (lower is better)
Translates to: LFPKPTRFAVKYDWL*ITLFNTGEAESVVA
Trigger: GGCGACCACTGATTCTGCTTCACCAGTGTTAAATAATGTAATCAAGAGCCAGTCATATTTTACAGCGAAGCGGGTCGGTTTGGGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354189.9
CDS CCA 72 bp TTTCCCAAACCGACCCGCTTCGCTGTAAAATATGACTaGCTCTTGATTACATTATTTAACACTGGTGAAGCA +
Preference number: 6 (lower is better)
Translates to: FPKPTRFAVKYD*LLITLFNTGEA
Trigger: TGCTTCACCAGTGTTAAATAATGTAATCAAGAGCCAGTCATATTTTACAGCGAAGCGGGTCGGTTTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354189.9
CDS CAA 90 bp CTCACCTTAAATACGACTTTTGTAGAATTACATAGTAGGTTCCACTaGCTCCAACCAAATGCAAAAGCAGAACTTAGTAGGGCCATCTGT +
Preference number: 6 (lower is better)
Translates to: LTLNTTFVELHSRFH*LQPNAKAELSRAIC
Trigger: ACAGATGGCCCTACTAAGTTCTGCTTTTGCATTTGGTTGGAGCAAGTGGAACCTACTATGTAATTCTACAAAAGTCGTATTTAAGGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000320267.13
ENST00000395987.8
ENST00000395990.6
ENST00000545133.5
ENST00000556006.6
ENST00000674567.1
ENST00000676236.1
CDS CAA 72 bp AAACCGACCCGCTTCGCTGTAAAATATGACTGGCTCTaGATTACATTATTTAACACTGGTGAAGCAGAATCA +
Preference number: 6 (lower is better)
Translates to: KPTRFAVKYDWL*ITLFNTGEAES
Trigger: TGATTCTGCTTCACCAGTGTTAAATAATGTAATCAAGAGCCAGTCATATTTTACAGCGAAGCGGGTCGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354189.9