RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP92 (Homo sapiens)

Ensembl gene IDs: ENSG00000114656

Ensembl transcript IDs: ENST00000265068.9, ENST00000507225.1, ENST00000510149.1, ENST00000511204.1, ENST00000511438.5, ENST00000515659.1, ENST00000637488.2, ENST00000645291.2, ENST00000669741.1

Found 874 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATaGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCAT +
Preference number: 1 (lower is better)
Translates to: AAGTEAGGQHPHQPV*HDGRAVAGQPLHPH
Trigger: ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR TCA 90 bp CAGCCTTTAATGGGTGACAGCAGGACCCTGAGAACCACCCTTTGGTaGTGGCCTCGGGTCCCCTTTGTCCTCACCCTGCAAGGAGGGCCC +
Preference number: 1 (lower is better)
Translates to: QPLMGDSRTLRTTLW*WPRVPFVLTLQGGP
Trigger: GGGCCCTCCTTGCAGGGTGAGGACAAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTCTCAGGGTCCTGCTGTCACCCATTAAAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 90 bp CAGGTCCCATGGTACGCTCCCCCAGGAGGATCATGGGTTCCTCCTTaGGACTGTAGGACGAAGGAAGCAGCTAGCAAAGGCGTTCGCTCA +
Preference number: 1 (lower is better)
Translates to: QVPWYAPPGGSWVPP*DCRTKEAASKGVRS
Trigger: TGAGCGAACGCCTTTGCTAGCTGCTTCCTTCGTCCTACAGTCCCAAGGAGGAACCCATGATCCTCCTGGGGGAGCGTACCATGGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 90 bp TCCAAAGCGGGGCAGGTCCCATGGTACGCTCCCCCAGGAGGATCATaGGTTCCTCCTTGGGACTGTAGGACGAAGGAAGCAGCTAGCAAA +
Preference number: 1 (lower is better)
Translates to: SKAGQVPWYAPPGGS*VPPWDCRTKEAASK
Trigger: TTTGCTAGCTGCTTCCTTCGTCCTACAGTCCCAAGGAGGAACCCATGATCCTCCTGGGGGAGCGTACCATGGGACCTGCCCCGCTTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 90 bp CAGGAGACTAAGACAGGCAAAGATGCAGCCCAGGGAGGGACCATGTaGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTG +
Preference number: 1 (lower is better)
Translates to: QETKTGKDAAQGGTM*GTGLGSESPLGASV
Trigger: CACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACATGGTCCCTCCCTGGGCTGCATCTTTGCCTGTCTTAGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR TCA 90 bp ACCAGAACAGAATTCCAGGCTGCGGGCTCACAGCCTCCACACTGCTaGCAGTTGGGGCAGACCATTCTTTGCTCAGGGGACAGTCCTGTG +
Preference number: 1 (lower is better)
Translates to: TRTEFQAAGSQPPHC*QLGQTILCSGDSPV
Trigger: CACAGGACTGTCCCCTGAGCAAAGAATGGTCTGCCCCAACTGTCAGCAGTGTGGAGGCTGTGAGCCCGCAGCCTGGAATTCTGTTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 90 bp GAGGCCCAGCTTGGCAAACCCTTGCCTGTTACCTGTTACAGGCTTTaGTGCGGGCGAAGGGAGCAGCTCGAGGAAAGGTGGTGGTTTCTT +
Preference number: 1 (lower is better)
Translates to: EAQLGKPLPVTCYRL*CGRREQLEERWWFL
Trigger: AAGAAACCACCACCTTTCCTCGAGCTGCTCCCTTCGCCCGCACCAAAGCCTGTAACAGGTAACAGGCAAGGGTTTGCCAAGCTGGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 90 bp TACAGGCTTTGGTGCGGGCGAAGGGAGCAGCTCGAGGAAAGGTGGTaGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCT +
Preference number: 1 (lower is better)
Translates to: YRLWCGRREQLEERW*FLVQIKVHVVPVPA
Trigger: AGCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCCTCGAGCTGCTCCCTTCGCCCGCACCAAAGCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 90 bp CCCCTTCTGTGCAGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTaGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAG +
Preference number: 1 (lower is better)
Translates to: PLLCSLLEGGFTLGW*RVRPQSYMPMENGK
Trigger: CTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCTGCACAGAAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 90 bp AGCTCGAGGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTaGTGCCTGTCCCAGCTCCACCTGTCTCGATCCAACACAGGCTCC +
Preference number: 1 (lower is better)
Translates to: SSRKGGGFLYRSKST*CLSQLHLSRSNTGS
Trigger: GGAGCCTGTGTTGGATCGAGACAGGTGGAGCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCCTCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 90 bp TGTTACAGGCTTTGGTGCGGGCGAAGGGAGCAGCTCGAGGAAAGGTaGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCA +
Preference number: 1 (lower is better)
Translates to: CYRLWCGRREQLEER*WFLVQIKVHVVPVP
Trigger: TGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCCTCGAGCTGCTCCCTTCGCCCGCACCAAAGCCTGTAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 90 bp ACCACAGGTTGGCTGAGTGGGTCAGAATTTGGTCTGAGAAGTAAGTaGTGTGTCACACGGGAAGTGCCTGCACCCAGAGGGGCTCAGTCA +
Preference number: 1 (lower is better)
Translates to: TTGWLSGSEFGLRSK*CVTREVPAPRGAQS
Trigger: TGACTGAGCCCCTCTGGGTGCAGGCACTTCCCGTGTGACACATCACTTACTTCTCAGACCAAATTCTGACCCACTCAGCCAACCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR GCA 90 bp TCGAGGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTaGCTGTCCCAGCTCCACCTGTCTCGATCCAACACAGGCTCCAGT +
Preference number: 1 (lower is better)
Translates to: SRKGGGFLYRSKSTW*LSQLHLSRSNTGSS
Trigger: ACTGGAGCCTGTGTTGGATCGAGACAGGTGGAGCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 90 bp ACCAAGGAAAAGCCTTGTGTTCTTAGGCTAGACAGCTCTCCTAGCTaGAGCCTCCTTGAGAGCCACAGCAGTAACTGTGGGCCTGGGACA +
Preference number: 1 (lower is better)
Translates to: TKEKPCVLRLDSSPS*SLLESHSSNCGPGT
Trigger: TGTCCCAGGCCCACAGTTACTGCTGTGGCTCTCAAGGAGGCTCCAGCTAGGAGAGCTGTCTAGCCTAAGAACACAAGGCTTTTCCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR GCA 90 bp TATGAATGCTGGTTCCAGCTCAGAAAAGACCAACGCACGCGCTTCTaGAGAGTAGCCAGGAGAGGGCGCACAAGACACGTGATGGCAAAA +
Preference number: 1 (lower is better)
Translates to: YECWFQLRKDQRTRF*RVARRGRTRHVMAK
Trigger: TTTTGCCATCACGTGTCTTGTGCGCCCTCTCCTGGCTACTCTGCAGAAGCGCGTGCGTTGGTCTTTTCTGAGCTGGAACCAGCATTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 90 bp GAGCCTCTGCCCCCAGCTCTTGGCTGGACACCTAGAGATCAGTCATaGGTAATAGTGTTGAAGCTCAGGAAGCCTTTAGACCTGTCTTCC +
Preference number: 1 (lower is better)
Translates to: EPLPPALGWTPRDQS*VIVLKLRKPLDLSS
Trigger: GGAAGACAGGTCTAAAGGCTTCCTGAGCTTCAACACTATTACCCATGACTGATCTCTAGGTGTCCAGCCAAGAGCTGGGGGCAGAGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 90 bp TTGCTGTACTTGTCACACTGTTCCTTAGAACCAGCCTTTAATGGGTaGCAGCAGGACCCTGAGAACCACCCTTTGGTGATGGCCTCGGGT +
Preference number: 1 (lower is better)
Translates to: LLYLSHCSLEPAFNG*QQDPENHPLVMASG
Trigger: ACCCGAGGCCATCACCAAAGGGTGGTTCTCAGGGTCCTGCTGTCACCCATTAAAGGCTGGTTCTAAGGAACAGTGTGACAAGTACAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 90 bp AAGCTACTGTGTGCAATAGGTATGCTGGAGGGTCAGGCTGGAGCGTaGGGTGGGGTAAGACCCTCTGAAAGTTTACTCTCTGTCACTGTT +
Preference number: 1 (lower is better)
Translates to: KLLCAIGMLEGQAGA*GGVRPSESLLSVTV
Trigger: AACAGTGACAGAGAGTAAACTTTCAGAGGGTCTTACCCCACCCCACGCTCCAGCCTGACCCTCCAGCATACCTATTGCACACAGTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR GCA 90 bp AGGACTTGGAGGGACTGGTACAGCAAGACCTACGTTTCCTGTCTCTaGCTTACCCCAAAGAAAGAACTGTCAGTATCTTTGCCGCTGGAA +
Preference number: 1 (lower is better)
Translates to: RTWRDWYSKTYVSCL*LTPKKELSVSLPLE
Trigger: TTCCAGCGGCAAAGATACTGACAGTTCTTTCTTTGGGGTAAGGCAGAGACAGGAAACGTAGGTCTTGCTGTACCAGTCCCTCCAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 90 bp CTTCCAACTTCCCCACTTTATAGCCAAGAAACCAGACCCAGGGCATaGAGGGATTTGCCTCAAGTCACACAAATGTCACACTTGGGGCTA +
Preference number: 1 (lower is better)
Translates to: LPTSPLYSQETRPRA*RDLPQVTQMSHLGL
Trigger: TAGCCCCAAGTGTGACATTTGTGTGACTTGAGGCAAATCCCTTCATGCCCTGGGTCTGGTTTCTTGGCTATAAAGTGGGGAAGTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 90 bp GTTGTCCTTAGGAGTCGAGGAGGAGAGGAAGCCATCACGTTCACCTaGCCTAGTTTTCTGGGAGAAGTTTCTCTGGCAGACCTTGTTTTT +
Preference number: 1 (lower is better)
Translates to: VVLRSRGGEEAITFT*PSFLGEVSLADLVF
Trigger: AAAAACAAGGTCTGCCAGAGAAACTTCTCCCAGAAAACTAGGTCAGGTGAACGTGATGGCTTCCTCTCCTCCTCGACTCCTAAGGACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 90 bp ACATGCCAATGGAGAATGGCAAGTTCTCCATTCATCCATCTGGGTTaGAAAGGCCTAGCGACCAGTTCAAGCCTCTCCCTCTCATCTGTA +
Preference number: 1 (lower is better)
Translates to: TCQWRMASSPFIHLG*KGLATSSSLSLSSV
Trigger: TACAGATGAGAGGGAGAGGCTTGAACTGGTCGCTAGGCCTTTTCAACCCAGATGGATGAATGGAGAACTTGCCATTCTCCATTGGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 90 bp CTTGGGTGGTCTGGAGCTCTAAAATGCCTATTGTGGACACTCCCTTaGGCACAGAGAAGGCAGCCGACTCTTTTTCCTCCAAGTATATTC +
Preference number: 1 (lower is better)
Translates to: LGWSGALKCLLWTLP*AQRRQPTLFPPSIF
Trigger: GAATATACTTGGAGGAAAAAGAGTCGGCTGCCTTCTCTGTGCTCAAGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGACCACCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 90 bp ATTACACCAGGTCCCAGCGTGCTCACTGTGGTGAACTTTAAGCTTTaGTGTGGTCCTTGGGTGGTCTGGAGCTCTAAAATGCCTATTGTG +
Preference number: 1 (lower is better)
Translates to: ITPGPSVLTVVNFKL*CGPWVVWSSKMPIV
Trigger: CACAATAGGCATTTTAGAGCTCCAGACCACCCAAGGACCACATCAAAGCTTAAAGTTCACCACAGTGAGCACGCTGGGACCTGGTGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR GCA 90 bp CTCGTCTCTACCAAAAATACAAAATCAGCCGGACGTGGTAGCGCATaGCTGTATTCCCAACTACTCAGGAAGGCTAATGCAGGAGAATCG +
Preference number: 1 (lower is better)
Translates to: LVSTKNTKSAGRGSA*LYSQLLRKANAGES
Trigger: CGATTCTCCTGCATTAGCCTTCCTGAGTAGTTGGGAATACAGGCATGCGCTACCACGTCCGGCTGATTTTGTATTTTTGGTAGAGACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 90 bp GTCGAGGAGGAGAGGAAGCCATCACGTTCACCTGACCTAGTTTTCTaGGAGAAGTTTCTCTGGCAGACCTTGTTTTTAGATAGGCTCATG +
Preference number: 1 (lower is better)
Translates to: VEEERKPSRSPDLVF*EKFLWQTLFLDRLM
Trigger: CATGAGCCTATCTAAAAACAAGGTCTGCCAGAGAAACTTCTCCCAGAAAACTAGGTCAGGTGAACGTGATGGCTTCCTCTCCTCCTCGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR GCA 90 bp GGTGTAAGGGAATGTTTGTGCTCCTCCAACAGCCAGTCCCAAACATaGGCTAATGTCATTTCATCCTTAACCTTGTGTGGTTGCTGTCAT +
Preference number: 1 (lower is better)
Translates to: GVRECLCSSNSQSQT*ANVISSLTLCGCCH
Trigger: ATGACAGCAACCACACAAGGTTAAGGATGAAATGACATTAGCGCATGTTTGGGACTGGCTGTTGGAGGAGCACAAACATTCCCTTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 90 bp GCAAATGGAGAAAGTGACATTTCAGCAAACTTGTTAGCACTTCCATaGAGCTGTGATCAGTTGTCCTTAGGAGTCGAGGAGGAGAGGAAG +
Preference number: 1 (lower is better)
Translates to: ANGESDISANLLALP*SCDQLSLGVEEERK
Trigger: CTTCCTCTCCTCCTCGACTCCTAAGGACAACTGATCACAGCTCCATGGAAGTGCTAACAAGTTTGCTGAAATGTCACTTTCTCCATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 90 bp CTCTGGCAGACCTTGTTTTTAGATAGGCTCATGTCTCTTTCTCCCTaGACAAAGGTTCTGGCTCTGTTAACCAAGTTTGGGTTCTATGTT +
Preference number: 1 (lower is better)
Translates to: LWQTLFLDRLMSLSP*TKVLALLTKFGFYV
Trigger: AACATAGAACCCAAACTTGGTTAACAGAGCCAGAACCTTTGTTCAGGGAGAAAGAGACATGAGCCTATCTAAAAACAAGGTCTGCCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACGGGTGTGGTCGGGTGTaGGGGAGGCTGTGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNGCGRV*GRLCRF
Trigger: GAACCTGCACAGCCTCCCCCACACCCGACCACACCC...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR CCA 90 bp CTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGAGGTTCACCATGCGGTaGCCGTGGGAGGGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: LSRASRSIRIGLRNHDHERFTMR*PWEGLC
Trigger: GCACAGACCCTCCCACGGCCACCGCATGGTGAACCT...CTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR TCA 90 bp TGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACTCAACCTGTATGGCATaGCGGCCGTGCTGTCGCGGG +
Preference number: 2 (lower is better)
Translates to: WGTGLGSESPLGASVIPDSTCMA*RPCCRG
Trigger: CCCGCGACAGCACGGCCGTCATGCCATACAGGTTGA...GTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR CCA 90 bp TCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGGGTGTGGTCGGGTGTaGGGGAGGCTGTGCAGGTTC +
Preference number: 2 (lower is better)
Translates to: SPLGASVIPDHHGGAAGTGCGRV*GRLCRF
Trigger: GAACCTGCACAGCCTCCCCCACACCCGACCACACCC...AGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR GCA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCGTGTGGGGGAGGCTGTaGAGGTTCACCATGCGGTGG +
Preference number: 2 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGVWGRL*RFTMRW
Trigger: CCACCGCATGGTGAACCTGCACAGCCTCCCCCACAC...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR GCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCACACAGGGCCTGGCTaGTGCCATCTGTCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: GTGLGSESPLGASVIPDHHTGPG*CHLSCC
Trigger: GCAGCAGGACAGATGGCAGCAGCCAGGCCCTGTGTG...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR CAA 90 bp GGAGGCCCAGCTTGGCAAACCCTTGCCTGTTACCTGTTACAGGCTTaGGTGCGGGCGAAGGGAGCAGCTCGAGGAAAGGTGGTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: GGPAWQTLACYLLQA*VRAKGAARGKVVVS
Trigger: AGAAACCACCACCTTTCCTCGAGCTGCTCCCTTCGCCCGCACCAAAGCCTGTAACAGGTAACAGGCAAGGGTTTGCCAAGCTGGGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR GCA 90 bp GAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGCACACAGGGCCTGGCTaGTGCCATCTGTCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: EQLVLKRVANILINLYGMHTGPG*CHLSCC
Trigger: GCAGCAGGACAGATGGCAGCAGCCAGGCCCTGTGTG...CATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR GCA 90 bp GGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGACCCGTGGCACAGAGCTCCTaGCTGCCCACGGCATCAGGA +
Preference number: 2 (lower is better)
Translates to: GCLEFLCTGEVWGGAVRPVAQSS*LPTASG
Trigger: TCCTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCAC...GGGTCTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp GAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGAGGTTCACCATGCGGTaGCCGTGGGAGGGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: EQLVLKRVANILINLYGMRFTMR*PWEGLC
Trigger: GCACAGACCCTCCCACGGCCACCGCATGGTGAACCT...CATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR CCA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGTTGTTGAGGAGGGTGTaGTCGGGTGTGGGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWLLRRV*SGVGEA
Trigger: AGCCTCCCCCACACCCGACCACACCCTCCTCAACAA...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR CAA 90 bp TTTGGTGCGGGCGAAGGGAGCAGCTCGAGGAAAGGTGGTGGTTTCTaGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCTCCACCTG +
Preference number: 2 (lower is better)
Translates to: FGAGEGSSSRKGGGF*YRSKSTWCLSQLHL
Trigger: CAGGTGGAGCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCCTCGAGCTGCTCCCTTCGCCCGCACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR TCA 90 bp AAACAAGTCCCGGGCCAGGTGTGCACAGCCATCTGCACAGGCTGTGAACAGAGGCTGAACTGGAGGCTCTaGCTTACGGGGTTTTTGCCC +
Preference number: 2 (lower is better)
Translates to: KQVPGQVCTAICTGCEQRLNWRL*LTGFLP
Trigger: GGGCAAAAACCCCGTAAGTCAGAGCCTCCAGTTCAG...CCTCTGTTCACAGCCTGTGCAGATGGCTGTGCACACCTGGCCCGGGACTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CCA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGATTGTTGAGGAGGGTGTaGTCGGGTGTGGGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: LGSESPLGASVIPDHHGGLLRRV*SGVGEA
Trigger: AGCCTCCCCCACACCCGACCACACCCTCCTCAACAA...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR CCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATCCGCTCCATCCGCATTaGGCTCCGCAACCACGACCA +
Preference number: 2 (lower is better)
Translates to: TGLGSESPLGASVIPDHHPLHPH*APQPRP
Trigger: TGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGG...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR CCA 90 bp GGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGAAGCGGGTCCTCATCAACCTGTATaGCATGACGGCCGTGCTGTC +
Preference number: 2 (lower is better)
Translates to: GASVIPDHHGGAAGTEAGPHQPV*HDGRAV
Trigger: GACAGCACGGCCGTCATGCCATACAGGTTGATGAGG...ACCCGCTTCAGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR CCA 90 bp AGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTCTTCCCCCCAGCTCTTGGCTaGACACCTAGAGATCAGTCA +
Preference number: 2 (lower is better)
Translates to: SHSSNCGPGTCPQRAGLFPPALG*TPRDQS
Trigger: TGACTGATCTCTAGGTGTCCAGCCAAGAGCTGGGGG...GAAGAGACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR TCA 90 bp AGGTCCCATGGTACGCTCCCCCAGGAGGATCATGGGTTCCTCCTTGGGACTGTATGGCACCTGTGGAACTaGACTGGAGGCTCTGACTTA +
Preference number: 2 (lower is better)
Translates to: RSHGTLPQEDHGFLLGTVWHLWN*TGGSDL
Trigger: TAAGTCAGAGCCTCCAGTTCAGTTCCACAGGTGCCA...TACAGTCCCAAGGAGGAACCCATGATCCTCCTGGGGGAGCGTACCATGGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR GCA 90 bp AGTTTCTGGCAAAACCAGACATACAACTGGCCTGCTGAGCTGACCCGTTCTCTGCACACGGGAAGTGCCTaGACCCAGAGGGGCTCAGTC +
Preference number: 2 (lower is better)
Translates to: SFWQNQTYNWPAELTRSLHTGSA*TQRGSV
Trigger: GACTGAGCCCCTCTGGGTGCAGGCACTTCCCGTGTG...CAGAGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR GCA 90 bp TGCAGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGAGCTTGGCAAACCCTTaGCTGTTACCTGTTACAGGC +
Preference number: 2 (lower is better)
Translates to: CSLLEGGFTLGWWRVRPQSLANP*LLPVTG
Trigger: GCCTGTAACAGGTAACAGGCAAGGGTTTGCCAAGCT...CTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp GAACCACCCTTTGGTGATGGCCTCGGGTCCCCTTTGTCCTCACCCTGCAAGGAGAAGAGGAAGAGGACTTaGAGGGACTGGTACAGCAAG +
Preference number: 2 (lower is better)
Translates to: EPPFGDGLGSPLSSPCKEKRKRT*RDWYSK
Trigger: CTTGCTGTACCAGTCCCTCCAAGTCCTCTTCCTCTT...CTCCTTGCAGGGTGAGGACAAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp TGTGGTCCTTGGGTGGTCTGGAGCTCTAAAATGCCTATTGTGGACACTCCCTTGCTGGCTGAGTGGGGCTaGCCTGAGCATTCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: CGPWVVWSSKMPIVDTPLLAEWG*PEHSAR
Trigger: CCTGGCAGAATGCTCAGGCCAGCCCCACTCAGCCAG...CAAGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGACCACCCAAGGACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR GCA 90 bp GGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGTGCTGCCATCTGTCCTaGTGCACTTTAATGAAGTTG +
Preference number: 2 (lower is better)
Translates to: GQHPHQPVWHDGRAVAGQCCHLS*CTLMKL
Trigger: CAACTTCATTAAAGTGCAGCAGGACAGATGGCAGCA...CTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR GCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCTGCTGCCATCTGTCCTaGTGCACTTTAATGAAGTTG +
Preference number: 2 (lower is better)
Translates to: VANILINLYGMTAVLSRACCHLS*CTLMKL
Trigger: CAACTTCATTAAAGTGCAGCAGGACAGATGGCAGCA...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR GCA 90 bp AGAAGGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGCCCCCAGGAGACTTTTaGTGGGAAGGCTGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: RRLLRVSLHRRSLGRGCQPPGDF*WEGWQW
Trigger: CCACTGCCAGCCTTCCCAGCAAAAGTCTCCTGGGGG...CTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp AGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTCTTCAGGACTTGGAGGGACTaGTACAGCAAGACCTACGTT +
Preference number: 2 (lower is better)
Translates to: SHSSNCGPGTCPQRAGLFRTWRD*YSKTYV
Trigger: AACGTAGGTCTTGCTGTACCAGTCCCTCCAAGTCCT...GAAGAGACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp TGCAGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGCCTGACCTAGTTTTCTaGGAGAAGTTTCTCTGGCAG +
Preference number: 2 (lower is better)
Translates to: CSLLEGGFTLGWWRVRPQPDLVF*EKFLWQ
Trigger: CTGCCAGAGAAACTTCTCCCAGAAAACTAGGTCAGG...CTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CAA 90 bp TGTGCACCTGTAGTCTTAGCTATGCGGGTGGCAGAGGCGGGAGGCTaGCTTCAGGCTGGAGTGAGCTATGATCATGTCACTTACACTCCA +
Preference number: 2 (lower is better)
Translates to: CAPVVLAMRVAEAGG*LQAGVSYDHVTYTP
Trigger: TGGAGTGTAAGTGACATGATCATAGCTCACTCCAGCCTGAAGCAAGCCTCCCGCCTCTGCCACCCGCATAGCTAAGACTACAGGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR TCA 90 bp CTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGCTGTGAGGATGAAATaGGGTGGCACGCAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: LGLCFPLYYEANSPEFPEAVRMK*GGTQQG
Trigger: ACCCTGCTGCGTGCCACCTCATTTCATCCTCACAGC...CTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
3UTR-3UTR TCA 90 bp ACAGCTCCTGGGGGTAGCCCTCATGCTCCCGCAGGATCCTCTTTAACAAAGCTGCTGAAGTCGGGAGTTTaGGACCAGCCTGACCAAAAT +
Preference number: 2 (lower is better)
Translates to: TAPGGSPHAPAGSSLTKLLKSGV*DQPDQN
Trigger: ATTTTGGTCAGGCTGGTCTCAAACTCCCGACTTCAG...CAGCTTTGTTAAAGAGGATCCTGCGGGAGCATGAGGGCTACCCCCAGGAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR TCA 90 bp TCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTAATGAAGTTGATTGTTaGGGAGGGTGTGGTCGGGTG +
Preference number: 2 (lower is better)
Translates to: SPLGASVIPDHHGGAAGTNEVDC*GGCGRV
Trigger: CACCCGACCACACCCTCCTCAACAATCAACTTCATT...AGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR TCA 90 bp TTGAGAGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCCAAAATGGATACCACTaGAGATGCAGAGTGGCACAG +
Preference number: 2 (lower is better)
Translates to: LRATAVTVGLGHAHREQVQNGYH*RCRVAQ
Trigger: CTGTGCCACTCTGCATCTTCAGTGGTATCCATTTTG...GACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR GCA 90 bp TGTGGTCCTTGGGTGGTCTGGAGCTCTAAAATGCCTATTGTGGACACTCCCTTGTGTTACAGGCTTTGGTaGGGGCGAAGGGAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: CGPWVVWSSKMPIVDTPLCYRLW*GRREQL
Trigger: GAGCTGCTCCCTTCGCCCGCACCAAAGCCTGTAACA...CAAGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGACCACCCAAGGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp ATTGACACCAACCCAAGAGCGCGAGAGGAGGATGACGACTGGCACCTGTGGAACCACAGGTTGGCTGAGTaGGTCAGAATTTGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: IDTNPRAREEDDDWHLWNHRLAE*VRIWSE
Trigger: CTCAGACCAAATTCTGACCCACTCAGCCAACCTGTG...GTTCCACAGGTGCCAGTCGTCATCCTCCTCTCGCGCTCTTGGGTTGGTGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CCA 90 bp AAACAAGTCCCGGGCCAGGTGTGCACAGCCATCTGCACAGGCTGTGAACAGAGGCCAGGCAGGCCCAAATaGTTGAACTTCTTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: KQVPGQVCTAICTGCEQRPGRPK*LNFFFL
Trigger: GAGGAAAAAGAAGTTCAACCATTTGGGCCTGCCTGG...CCTCTGTTCACAGCCTGTGCAGATGGCTGTGCACACCTGGCCCGGGACTTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CCA 90 bp ACAGCTCCTGGGGGTAGCCCTCATGCTCCCGCAGGATCCTCTTTAACAAAGCTGCTGGCTTCATTCTGCTaGAAACAGTCATGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: TAPGGSPHAPAGSSLTKLLASFC*KQSCQA
Trigger: TGCCTGGCATGACTGTTTCCAGCAGAATGAAGCCAG...CAGCTTTGTTAAAGAGGATCCTGCGGGAGCATGAGGGCTACCCCCAGGAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR GCA 90 bp ATCCCTGTTTGGCCACTGAGCTGTGTGGGATTAGGAAAGTTACTTAACCTCTTTGTGTCACACGGGAAGTaGCTGCACCCAGAGGGGCTC +
Preference number: 2 (lower is better)
Translates to: IPVWPLSCVGLGKLLNLFVSHGK*LHPEGL
Trigger: GAGCCCCTCTGGGTGCAGGCACTTCCCGTGTGACAC...AAAGAGGTTAAGTAACTTTCCTAATCCCACACAGCTCAGTGGCCAAACAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGGAGGATGAAATGAGGTaGCACGCAGCAGGGTTGTCA +
Preference number: 2 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWEDEMR*HAAGLS
Trigger: TGACAACCCTGCTGCGTGCCACCTCATTTCATCCTC...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
3UTR-3UTR CCA 90 bp AGAAGGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGTTCACTCTAGGCTGGTaGCGTGTAAGGCCTCAGTCT +
Preference number: 2 (lower is better)
Translates to: RRLLRVSLHRRSLGRGCQFTLGW*RVRPQS
Trigger: AGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAA...CTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR TCA 90 bp AGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGTCTGGCAAATGGAGAAAGTaGCATTTCAGCAAACTTGTT +
Preference number: 2 (lower is better)
Translates to: SLLEGGFTLGWWRVRPQSGKWRK*HFSKLV
Trigger: AACAAGTTTGCTGAAATGTCACTTTCTCCATTTGCC...AGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR GCA 90 bp GGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGAAGCGGGTTGCCATCTGTCCTGCTaGACTTTAATGAAGTTGATT +
Preference number: 2 (lower is better)
Translates to: GASVIPDHHGGAAGTEAGCHLSC*TLMKLI
Trigger: AATCAACTTCATTAAAGTGCAGCAGGACAGATGGCA...ACCCGCTTCAGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR CCA 90 bp ATTAGTTTCTGGCAAAACCAGACATACAACTGGCCTGCTGAGCTGACCCGTTCTGGTAGCTACCCTCTCTaGGCCTTTGTTTCCCCCTGT +
Preference number: 2 (lower is better)
Translates to: ISFWQNQTYNWPAELTRSGSYPL*AFVSPC
Trigger: ACAGGGGGAAACAAAGGCCCAGAGAGGGTAGCTACC...AGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CCA 90 bp GTCAGGGAGACATACACCAGAACAGAATTCCAGGCTGCGGGCTCACAGCCTCCAATCCTTAACCTTGTGTaGTTGCTGTCATCTCCACAT +
Preference number: 2 (lower is better)
Translates to: VRETYTRTEFQAAGSQPPILNLV*LLSSPH
Trigger: ATGTGGAGATGACAGCAACCACACAAGGTTAAGGAT...TGGAGGCTGTGAGCCCGCAGCCTGGAATTCTGTTCTGGTGTATGTCTCCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CCA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTTCAGGAGGCCCAGCTTaGCAAACCCTTGCCTGTTAC +
Preference number: 2 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFSGGPA*QTLACY
Trigger: GTAACAGGCAAGGGTTTGCCAAGCTGGGCCTCCTGA...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp ATGAAGCATGCATACCTCTGGACAGAAGGCTGCTTAGAGTTTCTTTGCACAGGAGACAGCTCTCCTAGCTaGAGCCTCCTTGAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: MKHAYLWTEGCLEFLCTGDSSPS*SLLESH
Trigger: GTGGCTCTCAAGGAGGCTCCAGCTAGGAGAGCTGTC...TCCTGTGCAAAGAAACTCTAAGCAGCCTTCTGTCCAGAGGTATGCATGCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp CAGGCCACAATCCCTTGGGGTTATGAGCCCTTAGTTTTTATCCTTCTCAGGAGAAGGCAAGGAGGAGACTaGGAACTTGGAGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: QATIPWGYEPLVFILLRRRQGGD*ELGELS
Trigger: GCTCAGCTCTCCAAGTTCCCAGTCTCCTCCTTGCCT...TCTCCTGAGAAGGATAAAAACTAAGGGCTCATAACCCCAAGGGATTGTGGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CAA 90 bp CCAGCTCTTGGCTGGACACCTAGAGATCAGTCATGGGTAATAGTGTaGAAGCTCAGGAAGCCTTTAGACCTGTCTTCCAACTTCCCCACT +
Preference number: 2 (lower is better)
Translates to: PALGWTPRDQSWVIV*KLRKPLDLSSNFPT
Trigger: AGTGGGGAAGTTGGAAGACAGGTCTAAAGGCTTCCTGAGCTTCAACACTATTACCCATGACTGATCTCTAGGTGTCCAGCCAAGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR TCA 90 bp CAGGCCACAATCCCTTGGGGTTATGAGCCCTTAGTTTTTATCCTTCTCAGGAGAGCTAGAATCCTGGTCTaGGTTCCAGCCCAGCATTCA +
Preference number: 2 (lower is better)
Translates to: QATIPWGYEPLVFILLRRARILV*VPAQHS
Trigger: TGAATGCTGGGCTGGAACTCAGACCAGGATTCTAGC...TCTCCTGAGAAGGATAAAAACTAAGGGCTCATAACCCCAAGGGATTGTGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR TCA 90 bp AGAAGGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGACTTCCATGGAGCTGTaGTCAGTTGTCCTTAGGAGT +
Preference number: 2 (lower is better)
Translates to: RRLLRVSLHRRSLGRGCQTSMEL*SVVLRS
Trigger: ACTCCTAAGGACAACTGATCACAGCTCCATGGAAGT...CTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR GCA 90 bp GACCCGTTCTCTGTCGATGACCATAGGCTATGTCATGGGTATAATGGAGCGGCCACTCTCTGTCACTGTTaGCTCTCAAGAGGTTCTGAT +
Preference number: 2 (lower is better)
Translates to: DPFSVDDHRLCHGYNGAATLCHC*LSRGSD
Trigger: ATCAGAACCTCTTGAGAGGCAACAGTGACAGAGAGT...GGCCGCTCCATTATACCCATGACATAGCCTATGGTCATCGACAGAGAACGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR GCA 90 bp TGTGGTCCTTGGGTGGTCTGGAGCTCTAAAATGCCTATTGTGGACACTCCCTTGGGCCTCAGTCTTACATaGCAATGGAGAATGGCAAGT +
Preference number: 2 (lower is better)
Translates to: CGPWVVWSSKMPIVDTPLGLSLT*QWRMAS
Trigger: ACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCC...CAAGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGACCACCCAAGGACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp ATGAAGCATGCATACCTCTGGACAGAAGGCTGCTTAGAGTTTCTTTGCACAGGAACTGAAGATGCAGAGTaGCACAGAGCTCCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: MKHAYLWTEGCLEFLCTGTEDAE*HRAPAC
Trigger: GCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGT...TCCTGTGCAAAGAAACTCTAAGCAGCCTTCTGTCCAGAGGTATGCATGCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CAA 90 bp GACATTTCAGCAAACTTGTTAGCACTTCCATGGAGCTGTGATCAGTaGTCCTTAGGAGTCGAGGAGGAGAGGAAGCCATCACGTTCACCT +
Preference number: 2 (lower is better)
Translates to: DISANLLALPWSCDQ*SLGVEEERKPSRSP
Trigger: AGGTGAACGTGATGGCTTCCTCTCCTCCTCGACTCCTAAGGACAACTGATCACAGCTCCATGGAAGTGCTAACAAGTTTGCTGAAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CAA 90 bp TACATGCCAATGGAGAATGGCAAGTTCTCCATTCATCCATCTGGGTaGAAAAGGCCTAGCGACCAGTTCAAGCCTCTCCCTCTCATCTGT +
Preference number: 2 (lower is better)
Translates to: YMPMENGKFSIHPSG*KRPSDQFKPLPLIC
Trigger: ACAGATGAGAGGGAGAGGCTTGAACTGGTCGCTAGGCCTTTTCAACCCAGATGGATGAATGGAGAACTTGCCATTCTCCATTGGCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CAA 90 bp CCTTGGGTGGTCTGGAGCTCTAAAATGCCTATTGTGGACACTCCCTaGAGCACAGAGAAGGCAGCCGACTCTTTTTCCTCCAAGTATATT +
Preference number: 2 (lower is better)
Translates to: PWVVWSSKMPIVDTP*STEKAADSFSSKYI
Trigger: AATATACTTGGAGGAAAAAGAGTCGGCTGCCTTCTCTGTGCTCAAGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGACCACCCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR GCA 90 bp GAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGTGCCATCTGTCCTGCTaGACTTTAATGAAGTTGATT +
Preference number: 2 (lower is better)
Translates to: EQLVLKRVANILINLYGMCHLSC*TLMKLI
Trigger: AATCAACTTCATTAAAGTGCAGCAGGACAGATGGCA...CATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR CCA 90 bp GGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGACCCTGGGAGAAGTTTCTCTaGCAGACCTTGTTTTTAGAT +
Preference number: 2 (lower is better)
Translates to: GCLEFLCTGEVWGGAVRPWEKFL*QTLFLD
Trigger: ATCTAAAAACAAGGTCTGCCAGAGAAACTTCTCCCA...GGGTCTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR TCA 90 bp TGCCTGCACCCAGGTGAAATAAACAGCCTTGTTACTTACACAAAGCCTGTTTGGGGTCTGAGAAGTAAGTaGTGTGTCACACGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: CLHPGEINSLVTYTKPVWGLRSK*CVTREV
Trigger: CACTTCCCGTGTGACACATCACTTACTTCTCAGACC...CCAAACAGGCTTTGTGTAAGTAACAAGGCTGTTTATTTCACCTGGGTGCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR GCA 90 bp TGCCTGCACCCAGGTGAAATAAACAGCCTTGTTACTTACACAAAGCCTGTTTGGCCAGGTGTGGTGGTGTaGACCTGTAGTCTTAGCTAT +
Preference number: 2 (lower is better)
Translates to: CLHPGEINSLVTYTKPVWPGVVV*TCSLSY
Trigger: ATAGCTAAGACTACAGGTGCACACCACCACACCTGG...CCAAACAGGCTTTGTGTAAGTAACAAGGCTGTTTATTTCACCTGGGTGCAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR TCA 90 bp GAGCTGACCCGTTCTCTGTCGATGACCATAGGCTATGTCATGGGTATAATGGAGAGCACTTTCTCAAACTaGATTGACACCAACCCAAGA +
Preference number: 2 (lower is better)
Translates to: ELTRSLSMTIGYVMGIMESTFSN*IDTNPR
Trigger: TCTTGGGTTGGTGTCAATTCAGTTTGAGAAAGTGCT...CTCCATTATACCCATGACATAGCCTATGGTCATCGACAGAGAACGGGTCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR TCA 90 bp CAGGCCACAATCCCTTGGGGTTATGAGCCCTTAGTTTTTATCCTTCTCAGGAGAACTGGCTTCTACTCTTaGGGAGAGGATGAATGGTAT +
Preference number: 2 (lower is better)
Translates to: QATIPWGYEPLVFILLRRTGFYS*GEDEWY
Trigger: ATACCATTCATCCTCTCCTCAAGAGTAGAAGCCAGT...TCTCCTGAGAAGGATAAAAACTAAGGGCTCATAACCCCAAGGGATTGTGGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR GCA 90 bp TGGTTAAGAGTGGAATGGTGTAAGGGAATGTTTGTGCTCCTCCAACAGCCAGTCATATCCCCAGTGACCTaGATGTATACATCCAGATGG +
Preference number: 2 (lower is better)
Translates to: WLRVEWCKGMFVLLQQPVISPVT*MYTSRW
Trigger: CCATCTGGATGTATACATGCAGGTCACTGGGGATAT...GACTGGCTGTTGGAGGAGCACAAACATTCCCTTACACCATTCCACTCTTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR GCA 90 bp CAGGCCACAATCCCTTGGGGTTATGAGCCCTTAGTTTTTATCCTTCTCAGGAGACTCTGGACAGAAGGCTaGTTAGAGTTTCTTTGCACA +
Preference number: 2 (lower is better)
Translates to: QATIPWGYEPLVFILLRRLWTEG*LEFLCT
Trigger: TGTGCAAAGAAACTCTAAGCAGCCTTCTGTCCAGAG...TCTCCTGAGAAGGATAAAAACTAAGGGCTCATAACCCCAAGGGATTGTGGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp TCCTTAACCTTGTGTGGTTGCTGTCATCTCCACATTACAGATGGGGGAAATGAGGGAATCAAACAGAGCTaGGTTCAAGTCCAGGCTTCA +
Preference number: 2 (lower is better)
Translates to: SLTLCGCCHLHITDGGNEGIKQS*VQVQAS
Trigger: TGAAGCCTGGACTTGAACCCAGCTCTGTTTGATTCC...CTCATTTCCCCCATCTGTAATGTGGAGATGACAGCAACCACACAAGGTTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CCA 90 bp CTTCTTACCAAGGAAAAGCCTTGTGTTCTTAGGCTAGACAGCTCTCCTAGCTGGCTCGAGGAAAGGTGGTaGTTTCTTGTACAGATCAAA +
Preference number: 2 (lower is better)
Translates to: LLTKEKPCVLRLDSSPSWLEERW*FLVQIK
Trigger: TTTGATCTGTACAAGAAACCACCACCTTTCCTCGAG...CCAGCTAGGAGAGCTGTCTAGCCTAAGAACACAAGGCTTTTCCTTGGTAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR TCA 90 bp CGAGAAAGTGAAGGTGATCAGGAAGGACAAGCTGTAGGTGAAGTATCATTTTCATTTCTCAAACTGAATTaGCACCAACCCAAGAGCGCG +
Preference number: 2 (lower is better)
Translates to: RESEGDQEGQAVGEVSFSFLKLN*HQPKSA
Trigger: CGCGCTCTTGGGTTGGTGTCAATTCAGTTTGAGAAA...TGAAAATGATACTTCACCTACAGCTTGTCCTTCCTGATCACCTTCACTTTCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CCA 90 bp ATTAGTTTCTGGCAAAACCAGACATACAACTGGCCTGCTGAGCTGACCCGTTCTATGTATACATCCAGATaGCCTGAAGCAACTGAAGAT +
Preference number: 2 (lower is better)
Translates to: ISFWQNQTYNWPAELTRSMYTSR*PEATED
Trigger: ATCTTCAGTTGCTTCAGGCCATCTGGATGTATACAT...AGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR TCA 90 bp ATTAGTTTCTGGCAAAACCAGACATACAACTGGCCTGCTGAGCTGACCCGTTCTAGGACAAGCTGTAGGTaGAGTATCATTTTCAAAAAG +
Preference number: 2 (lower is better)
Translates to: ISFWQNQTYNWPAELTRSRTSCR*SIIFKK
Trigger: CTTTTTGAAAATGATACTTCACCTACAGCTTGTCCT...AGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR TCA 90 bp ATGCCTGTAAATGTATTTCTAGGGCATGTAAAAGCCAAGTCGCTCACATTCAGATGGGGTAAGACCCTCTaGAAGTTTACTCTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: MPVNVFLGHVKAKSLTFRWGKTL*KFTLCH
Trigger: GTGACAGAGAGTAAACTTTCAGAGGGTCTTACCCCA...TCTGAATGTGAGCGACTTGGCTTTTACATGCCCTAGAAATACATTTACAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR TCA 90 bp ATGCCTGTAAATGTATTTCTAGGGCATGTAAAAGCCAAGTCGCTCACATTCAGACAAAGTTCTTACATGTaGACCCCTGCACTGTACAGC +
Preference number: 2 (lower is better)
Translates to: MPVNVFLGHVKAKSLTFRQSSYM*TPALYS
Trigger: GCTGTACAGTGCAGGGGTTCACATGTAAGAACTTTG...TCTGAATGTGAGCGACTTGGCTTTTACATGCCCTAGAAATACATTTACAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR GCA 90 bp CTTCTTACCAAGGAAAAGCCTTGTGTTCTTAGGCTAGACAGCTCTCCTAGCTGGTTTTCAGACCCATTCTaGATCTTGCTTTTCTTAGCA +
Preference number: 2 (lower is better)
Translates to: LLTKEKPCVLRLDSSPSWFSDPF*ILLFLA
Trigger: TGCTAAGAAAAGCAAGATGCAGAATGGGTCTGAAAA...CCAGCTAGGAGAGCTGTCTAGCCTAAGAACACAAGGCTTTTCCTTGGTAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CCA 90 bp CGAGAAAGTGAAGGTGATCAGGAAGGACAAGCTGTAGGTGAAGTATCATTTTCAGGCTTCCTTGGATTTTaGAATCAAACAGAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: RESEGDQEGQAVGEVSFSGFLGF*NQTELG
Trigger: ACCCAGCTCTGTTTGATTCCAAAATCCAAGGAAGCC...TGAAAATGATACTTCACCTACAGCTTGTCCTTCCTGATCACCTTCACTTTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR GCA 90 bp CGAGAAAGTGAAGGTGATCAGGAAGGACAAGCTGTAGGTGAAGTATCATTTTCATTTAAAACTGCAAACTaGCAAATGCGGCAGCTCATG +
Preference number: 2 (lower is better)
Translates to: RESEGDQEGQAVGEVSFSFKTAN*QMRQLM
Trigger: CATGAGCTGCCGCATTTGGCAGTTTGCAGTTTTAAA...TGAAAATGATACTTCACCTACAGCTTGTCCTTCCTGATCACCTTCACTTTCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CCA 90 bp ATCCCTGTTTGGCCACTGAGCTGTGTGGGATTAGGAAAGTTACTTAACCTCTTTTCCCATAGGCTTCCTTaGATTTTGGAATCAAACAGA +
Preference number: 2 (lower is better)
Translates to: IPVWPLSCVGLGKLLNLFSHRLP*ILESNR
Trigger: TCTGTTTGATTCCAAAATCCAAGGAAGCCTATGGGA...AAAGAGGTTAAGTAACTTTCCTAATCCCACACAGCTCAGTGGCCAAACAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 72 bp GGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTaGGCTCCGCAACCACGACCACGAGGTGAGCCCAGC +
Preference number: 3 (lower is better)
Translates to: GRAVAGQPLHPH*APQPRPRGEPS
Trigger: GCTGGGCTCACCTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR TCA 72 bp AGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATaGCGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCC +
Preference number: 3 (lower is better)
Translates to: SGWPTSSSTCMA*RPCCRGPAAPS
Trigger: GGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR CCA 72 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATaGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTC +
Preference number: 3 (lower is better)
Translates to: TEAGGQHPHQPV*HDGRAVAGQPL
Trigger: GAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR CAA 90 bp AGGTCCCATGGTACGCTCCCCCAGGAGGATCATGGGTTCCTCCTTGGGACTGTAGCAGAGGCGGGAGGCTaGCTTCAGGCTGGAGTGAGC +
Preference number: 3 (lower is better)
Translates to: RSHGTLPQEDHGFLLGTVAEAGG*LQAGVS
Trigger: GCTCACTCCAGCCTGAAGCAAGCCTCCCGCCTCTGC...TACAGTCCCAAGGAGGAACCCATGATCCTCCTGGGGGAGCGTACCATGGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CAA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGCCGCTCCATCCGCATaGGGCTCCGCAACCACGACC +
Preference number: 3 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAAAPSA*GSATTT
Trigger: GGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGC...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR GCA 72 bp GCCCACGGCATCAGGAGGCCCAGCTTGGCAAACCCTTaGCTGTTACCTGTTACAGGCTTTGGTGCGGGCGAA +
Preference number: 3 (lower is better)
Translates to: AHGIRRPSLANP*LLPVTGFGAGE
Trigger: TTCGCCCGCACCAAAGCCTGTAACAGGTAACAGGCAAGGGTTTGCCAAGCTGGGCCTCCTGATGCCGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp GGGCAGGTCCCATGGTACGCTCCCCCAGGAGGATCATaGGTTCCTCCTTGGGACTGTAGGACGAAGGAAGCA +
Preference number: 3 (lower is better)
Translates to: GQVPWYAPPGGS*VPPWDCRTKEA
Trigger: TGCTTCCTTCGTCCTACAGTCCCAAGGAGGAACCCATGATCCTCCTGGGGGAGCGTACCATGGGACCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR TCA 72 bp GCGCGAGAGGAGGATGACGACTGGCACCTGTGGAACTaGACTGGAGGCTCTGACTTACGGGGTTTTTGCCCC +
Preference number: 3 (lower is better)
Translates to: AREEDDDWHLWN*TGGSDLRGFCP
Trigger: GGGGCAAAAACCCCGTAAGTCAGAGCCTCCAGTTCAGTTCCACAGGTGCCAGTCGTCATCCTCCTCTCGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR TCA 72 bp GAATTCCAGGCTGCGGGCTCACAGCCTCCACACTGCTaGCAGTTGGGGCAGACCATTCTTTGCTCAGGGGAC +
Preference number: 3 (lower is better)
Translates to: EFQAAGSQPPHC*QLGQTILCSGD
Trigger: GTCCCCTGAGCAAAGAATGGTCTGCCCCAACTGTCAGCAGTGTGGAGGCTGTGAGCCCGCAGCCTGGAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR TCA 72 bp ATGGGTGACAGCAGGACCCTGAGAACCACCCTTTGGTaGTGGCCTCGGGTCCCCTTTGTCCTCACCCTGCAA +
Preference number: 3 (lower is better)
Translates to: MGDSRTLRTTLW*WPRVPFVLTLQ
Trigger: TTGCAGGGTGAGGACAAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTCTCAGGGTCCTGCTGTCACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR GCA 72 bp CTAAAACAAGTCCCGGGCCAGGTGTGCACAGCCATCTaGACAGGCTGTGAACAGAGGCGTGCACAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: LKQVPGQVCTAI*TGCEQRRAQLL
Trigger: CAGGAGCTGTGCACGCCTCTGTTCACAGCCTGTGCAGATGGCTGTGCACACCTGGCCCGGGACTTGTTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CAA 90 bp AAACAAGTCCCGGGCCAGGTGTGCACAGCCATCTGCACAGGCTGTGAACAGAGGCCACCACACCACAGGTaGGCTGAGTGGGTCAGAATT +
Preference number: 3 (lower is better)
Translates to: KQVPGQVCTAICTGCEQRPPHHR*AEWVRI
Trigger: AATTCTGACCCACTCAGCCAACCTGTGGTGTGGTGG...CCTCTGTTCACAGCCTGTGCAGATGGCTGTGCACACCTGGCCCGGGACTTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CAA 90 bp GGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGACCCCTCTGCCCCCAGCTCTaGGCTGGACACCTAGAGATC +
Preference number: 3 (lower is better)
Translates to: GCLEFLCTGEVWGGAVRPLCPQL*AGHLEI
Trigger: GATCTCTAGGTGTCCAGCCAAGAGCTGGGGGCAGAG...GGGTCTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR GCA 72 bp TGGTTCCAGCTCAGAAAAGACCAACGCACGCGCTTCTaGAGAGTAGCCAGGAGAGGGCGCACAAGACACGTG +
Preference number: 3 (lower is better)
Translates to: WFQLRKDQRTRF*RVARRGRTRHV
Trigger: CACGTGTCTTGTGCGCCCTCTCCTGGCTACTCTGCAGAAGCGCGTGCGTTGGTCTTTTCTGAGCTGGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR GCA 72 bp CCAGTGGCATCCCACTCTCAGTCGTGCCAACCAAAATaGCTCCACACACAGCCAAGTGTCCCCAGCAGACAC +
Preference number: 3 (lower is better)
Translates to: PVASHSQSCQPK*LHTQPSVPSRH
Trigger: GTGTCTGCTGGGGACACTTGGCTGTGTGTGGAGGCATTTTGGTTGGCACGACTGAGAGTGGGATGCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 72 bp TGGTACGCTCCCCCAGGAGGATCATGGGTTCCTCCTTaGGACTGTAGGACGAAGGAAGCAGCTAGCAAAGGC +
Preference number: 3 (lower is better)
Translates to: WYAPPGGSWVPP*DCRTKEAASKG
Trigger: GCCTTTGCTAGCTGCTTCCTTCGTCCTACAGTCCCAAGGAGGAACCCATGATCCTCCTGGGGGAGCGTACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 72 bp AAGACAGGCAAAGATGCAGCCCAGGGAGGGACCATGTaGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGA +
Preference number: 3 (lower is better)
Translates to: KTGKDAAQGGTM*GTGLGSESPLG
Trigger: TCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACATGGTCCCTCCCTGGGCTGCATCTTTGCCTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR CCA 72 bp CTTGGCAAACCCTTGCCTGTTACCTGTTACAGGCTTTaGTGCGGGCGAAGGGAGCAGCTCGAGGAAAGGTGG +
Preference number: 3 (lower is better)
Translates to: LGKPLPVTCYRL*CGRREQLEERW
Trigger: CCACCTTTCCTCGAGCTGCTCCCTTCGCCCGCACCAAAGCCTGTAACAGGTAACAGGCAAGGGTTTGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp GGTCTCTTCAGGCAACCTGGGAGATCTAGGGCCTACTaGGGAGGGAGGGAGCCAAGTCTAGGCAAATGGAGA +
Preference number: 3 (lower is better)
Translates to: GLFRQPGRSRAY*GGREPSLGKWR
Trigger: TCTCCATTTGCCTAGACTTGGCTCCCTCCCTCCCCAGTAGGCCCTAGATCTCCCAGGTTGCCTGAAGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp CTGGGAACTTGGAGAGCTGAGCTGGCTGAGTGGGGCTaGCCTGAGCATTCTGCCAGGGGTTTGGTAACTAGT +
Preference number: 3 (lower is better)
Translates to: LGTWRAELAEWG*PEHSARGLVTS
Trigger: ACTAGTTACCAAACCCCTGGCAGAATGCTCAGGCCAGCCCCACTCAGCCAGCTCAGCTCTCCAAGTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR GCA 72 bp AGTCAGGGAGACATACACCAGAACAGAATTCCAGGCTaGGGGCTCACAGCCTCCACACTGCTGACAGTTGGG +
Preference number: 3 (lower is better)
Translates to: SQGDIHQNRIPG*GLTASTLLTVG
Trigger: CCCAACTGTCAGCAGTGTGGAGGCTGTGAGCCCGCAGCCTGGAATTCTGTTCTGGTGTATGTCTCCCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 72 bp TGGTGCGGGCGAAGGGAGCAGCTCGAGGAAAGGTGGTaGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCT +
Preference number: 3 (lower is better)
Translates to: WCGRREQLEERW*FLVQIKVHVVP
Trigger: AGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCCTCGAGCTGCTCCCTTCGCCCGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp TGCAGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTaGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAG +
Preference number: 3 (lower is better)
Translates to: CSLLEGGFTLGW*RVRPQSYMPME
Trigger: CTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp CTGTGCAGCCTTCTGGAAGGGGGCTTCACTCTAGGCTaGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATG +
Preference number: 3 (lower is better)
Translates to: LCSLLEGGFTLG*WRVRPQSYMPM
Trigger: CATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCTGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CAA 90 bp GGCTGGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAGTTCTACCTGTTACAGGCTTaGGTGCGGGCGAAGGGAGCA +
Preference number: 3 (lower is better)
Translates to: GWWRVRPQSYMPMENGKFYLLQA*VRAKGA
Trigger: TGCTCCCTTCGCCCGCACCAAAGCCTGTAACAGGTA...GAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp CTTTGGTGCGGGCGAAGGGAGCAGCTCGAGGAAAGGTaGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTG +
Preference number: 3 (lower is better)
Translates to: LWCGRREQLEER*WFLVQIKVHVV
Trigger: CACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCCTCGAGCTGCTCCCTTCGCCCGCACCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 72 bp TGGCTGAGTGGGTCAGAATTTGGTCTGAGAAGTAAGTaGTGTGTCACACGGGAAGTGCCTGCACCCAGAGGG +
Preference number: 3 (lower is better)
Translates to: WLSGSEFGLRSK*CVTREVPAPRG
Trigger: CCCTCTGGGTGCAGGCACTTCCCGTGTGACACATCACTTACTTCTCAGACCAAATTCTGACCCACTCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR TCA 72 bp TGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTaGAGCGGGTGGCCAACATCCTCATCAACCTGTATG +
Preference number: 3 (lower is better)
Translates to: CDPRPSWRSSWY*SGWPTSSSTCM
Trigger: CATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR GCA 72 bp GGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTaGCTGTCCCAGCTCCACCTGTCTCGATCCAACACA +
Preference number: 3 (lower is better)
Translates to: GGGFLYRSKSTW*LSQLHLSRSNT
Trigger: TGTGTTGGATCGAGACAGGTGGAGCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR GCA 72 bp GCATACCTCTGGACAGAAGGCTGCTTAGAGTTTCTTTaGACAGGAGAAGTTTGGGGAGGGGCTGTCAGACCC +
Preference number: 3 (lower is better)
Translates to: AYLWTEGCLEFL*TGEVWGGAVRP
Trigger: GGGTCTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCCTTCTGTCCAGAGGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp TGTGCAATAGGTATGCTGGAGGGTCAGGCTGGAGCGTaGGGTGGGGTAAGACCCTCTGAAAGTTTACTCTCT +
Preference number: 3 (lower is better)
Translates to: CAIGMLEGQAGA*GGVRPSESLLS
Trigger: AGAGAGTAAACTTTCAGAGGGTCTTACCCCACCCCACGCTCCAGCCTGACCCTCCAGCATACCTATTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 72 bp AAGCCTTGTGTTCTTAGGCTAGACAGCTCTCCTAGCTaGAGCCTCCTTGAGAGCCACAGCAGTAACTGTGGG +
Preference number: 3 (lower is better)
Translates to: KPCVLRLDSSPS*SLLESHSSNCG
Trigger: CCCACAGTTACTGCTGTGGCTCTCAAGGAGGCTCCAGCTAGGAGAGCTGTCTAGCCTAAGAACACAAGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CAA 90 bp ATTGACACCAACCCAAGAGCGCGAGAGGAGGATGACGACTGGCACCTGTGGAACAGGCTTCCTTGGATTTaGGAATCAAACAGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: IDTNPRAREEDDDWHLWNRLPWI*ESNRAG
Trigger: CCCAGCTCTGTTTGATTCCAAAATCCAAGGAAGCCT...GTTCCACAGGTGCCAGTCGTCATCCTCCTCTCGCGCTCTTGGGTTGGTGTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR TCA 72 bp AGGAGTCGAGGAGGAGAGGAAGCCATCACGTTCACCTaGCCTAGTTTTCTGGGAGAAGTTTCTCTGGCAGAC +
Preference number: 3 (lower is better)
Translates to: RSRGGEEAITFT*PSFLGEVSLAD
Trigger: GTCTGCCAGAGAAACTTCTCCCAGAAAACTAGGTCAGGTGAACGTGATGGCTTCCTCTCCTCCTCGACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR GCA 72 bp TCTGCCTTACCCCAAAGAAAGAACTGTCAGTATCTTTaGCGCTGGAAGGTCCCAGTGAAGCCCAGAGCCTCT +
Preference number: 3 (lower is better)
Translates to: SALPQRKNCQYL*RWKVPVKPRAS
Trigger: AGAGGCTCTGGGCTTCACTGGGACCTTCCAGCGGCAAAGATACTGACAGTTCTTTCTTTGGGGTAAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CAA 90 bp GGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGAAGCGGGTTGCACTTTAATGAAGTaGATTGTTGAGGAGGGTGTG +
Preference number: 3 (lower is better)
Translates to: GASVIPDHHGGAAGTEAGCTLMK*IVEEGV
Trigger: CACACCCTCCTCAACAATCAACTTCATTAAAGTGCA...ACCCGCTTCAGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR-3UTR CAA 90 bp GGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGACCCACACAAATGTCACACTaGGGGCTAGAATCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: GCLEFLCTGEVWGGAVRPTQMSH*GLESWS
Trigger: AGACCAGGATTCTAGCCCCAAGTGTGACATTTGTGT...GGGTCTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CAA 90 bp AGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTCTTCTCATGGGTAATAGTGTaGAAGCTCAGGAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: SHSSNCGPGTCPQRAGLFSWVIV*KLRKPL
Trigger: TAAAGGCTTCCTGAGCTTCAACACTATTACCCATGA...GAAGAGACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CAA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCATGCACTTTAATGAAGTaGATTGTTGAGGAGGGTGTG +
Preference number: 3 (lower is better)
Translates to: MWGTGLGSESPLGASVIPCTLMK*IVEEGV
Trigger: CACACCCTCCTCAACAATCAACTTCATTAAAGTGCA...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
3UTR TCA 72 bp GGTCCCAGCGTGCTCACTGTGGTGAACTTTAAGCTTTaGTGTGGTCCTTGGGTGGTCTGGAGCTCTAAAATG +
Preference number: 3 (lower is better)
Translates to: GPSVLTVVNFKL*CGPWVVWSSKM
Trigger: CATTTTAGAGCTCCAGACCACCCAAGGACCACATCAAAGCTTAAAGTTCACCACAGTGAGCACGCTGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp CCCCCAGCTCTTGGCTGGACACCTAGAGATCAGTCATaGGTAATAGTGTTGAAGCTCAGGAAGCCTTTAGAC +
Preference number: 3 (lower is better)
Translates to: PPALGWTPRDQS*VIVLKLRKPLD
Trigger: GTCTAAAGGCTTCCTGAGCTTCAACACTATTACCCATGACTGATCTCTAGGTGTCCAGCCAAGAGCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CAA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTTGGAGCTGTGATCAGTaGTCCTTAGGAGTCGAGGAG +
Preference number: 3 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFWSCDQ*SLGVEE
Trigger: CTCCTCGACTCCTAAGGACAACTGATCACAGCTCCA...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CAA 90 bp ATGAAGCATGCATACCTCTGGACAGAAGGCTGCTTAGAGTTTCTTTGCACAGGACTAGCTGGAGCCTCCTaGAGAGCCACAGCAGTAACT +
Preference number: 3 (lower is better)
Translates to: MKHAYLWTEGCLEFLCTGLAGAS*RATAVT
Trigger: AGTTACTGCTGTGGCTCTCAAGGAGGCTCCAGCTAG...TCCTGTGCAAAGAAACTCTAAGCAGCCTTCTGTCCAGAGGTATGCATGCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 72 bp CCTGTAAGAACTAATGATAATCCCACCACCCTTTGCTaGCTCTCTTTTCAGACTCAGCCTGCCTGCACCCAG +
Preference number: 3 (lower is better)
Translates to: PVRTNDNPTTLC*LSFQTQPACTQ
Trigger: CTGGGTGCAGGCAGGCTGAGTCTGAAAAGAGAGTCAGCAAAGGGTGGTGGGATTATCATTAGTTCTTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR TCA 72 bp TCTGGAGCTCTAAAATGCCTATTGTGGACACTCCCTTaGGCACAGAGAAGGCAGCCGACTCTTTTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: SGALKCLLWTLP*AQRRQPTLFPP
Trigger: TGGAGGAAAAAGAGTCGGCTGCCTTCTCTGTGCTCAAGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 72 bp TTGTCACACTGTTCCTTAGAACCAGCCTTTAATGGGTaGCAGCAGGACCCTGAGAACCACCCTTTGGTGATG +
Preference number: 3 (lower is better)
Translates to: LSHCSLEPAFNG*QQDPENHPLVM
Trigger: CATCACCAAAGGGTGGTTCTCAGGGTCCTGCTGTCACCCATTAAAGGCTGGTTCTAAGGAACAGTGTGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR GCA 72 bp CACCACCCTTTGCTGACTCTCTTTTCAGACTCAGCCTaGCTGCACCCAGGTGAAATAAACAGCCTTGTTACT +
Preference number: 3 (lower is better)
Translates to: HHPLLTLFSDSA*LHPGEINSLVT
Trigger: AGTAACAAGGCTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTGAAAAGAGAGTCAGCAAAGGGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CAA 90 bp CAGGCCACAATCCCTTGGGGTTATGAGCCCTTAGTTTTTATCCTTCTCAGGAGAATTCATCCATCTGGGTaGAAAAGGCCTAGCGACCAG +
Preference number: 3 (lower is better)
Translates to: QATIPWGYEPLVFILLRRIHPSG*KRPSDQ
Trigger: CTGGTCGCTAGGCCTTTTCAACCCAGATGGATGAAT...TCTCCTGAGAAGGATAAAAACTAAGGGCTCATAACCCCAAGGGATTGTGGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp TATGCTATTAGTTTCTGGCAAAACCAGACATACAACTaGCCTGCTGAGCTGACCCGTTCTCTGTCGATGACC +
Preference number: 3 (lower is better)
Translates to: YAISFWQNQTYN*PAELTRSLSMT
Trigger: GGTCATCGACAGAGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACTAATAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR-3UTR CAA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTCTTTTCTTAAACATGTaGTGGGAAGAGGAGACCCCA +
Preference number: 3 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFLFLNM*WEEETP
Trigger: TGGGGTCTCCTCTTCCCACAACATGTTTAAGAAAAG...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 72 bp GACTCTCTTTTCAGACTCAGCCTGCCTGCACCCAGGTaGAATAAACAGCCTTGTTACTTACACAAAGCCTGT +
Preference number: 3 (lower is better)
Translates to: DSLFRLSLPAPR*NKQPCYLHKAC
Trigger: ACAGGCTTTGTGTAAGTAACAAGGCTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTGAAAAGAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR TCA 72 bp CATTTCAGCAAACTTGTTAGCACTTCCATGGAGCTGTaGTCAGTTGTCCTTAGGAGTCGAGGAGGAGAGGAA +
Preference number: 3 (lower is better)
Translates to: HFSKLVSTSMEL*SVVLRSRGGEE
Trigger: TTCCTCTCCTCCTCGACTCCTAAGGACAACTGATCACAGCTCCATGGAAGTGCTAACAAGTTTGCTGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp GCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATaGCAAGTTCTCCATTCATCCATCTGGGTTGAAAAG +
Preference number: 3 (lower is better)
Translates to: ACKASVLHANGE*QVLHSSIWVEK
Trigger: CTTTTCAACCCAGATGGATGAATGGAGAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR-3UTR CAA 90 bp CATGTTGTGGGAAGAGGAGACCCCAGCAAGTGTTTCTTAAGTGATTTCACCAGTGACATTTCAGCAAACTaGTTAGCACTTCCATGGAGC +
Preference number: 3 (lower is better)
Translates to: HVVGRGDPSKCFLSDFTSDISAN*LALPWS
Trigger: GCTCCATGGAAGTGCTAACAAGTTTGCTGAAATGTC...ACTGGTGAAATCACTTAAGAAACACTTGCTGGGGTCTCCTCTTCCCACAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 72 bp GACTTTAGTTTCTTTACAAGAACTGGCTTCTACTCTTaGGGAGAGGATGAATGGTATCTCCAGGCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: DFSFFTRTGFYS*GEDEWYLQASR
Trigger: CCTGCTGGCCTGGAGATACCATTCATCCTCTCCTCAAGAGTAGAAGCCAGTTCTTGTAAAGAAACTAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR GCA 72 bp CACAAAATGAAGCATGCATACCTCTGGACAGAAGGCTaGTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: HKMKHAYLWTEG*LEFLCTGEVWG
Trigger: TCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCCTTCTGTCCAGAGGTATGCATGCTTCATTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp CAAGTCACACAAATGTCACACTTGGGGCTAGAATCCTaGTCTGAGTTCCAGCCCAGCATTCAATCTCTTTTT +
Preference number: 3 (lower is better)
Translates to: QVTQMSHLGLES*SEFQPSIQSLF
Trigger: AAAAAGAGATTGAATGCTGGGCTGGAACTCAGACCAGGATTCTAGCCCCAAGTGTGACATTTGTGTGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp GAGAGGAAGCCATCACGTTCACCTGACCTAGTTTTCTaGGAGAAGTTTCTCTGGCAGACCTTGTTTTTAGAT +
Preference number: 3 (lower is better)
Translates to: ERKPSRSPDLVF*EKFLWQTLFLD
Trigger: ATCTAAAAACAAGGTCTGCCAGAGAAACTTCTCCCAGAAAACTAGGTCAGGTGAACGTGATGGCTTCCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp GAAAGTGACATTTCAGCAAACTTGTTAGCACTTCCATaGAGCTGTGATCAGTTGTCCTTAGGAGTCGAGGAG +
Preference number: 3 (lower is better)
Translates to: ESDISANLLALP*SCDQLSLGVEE
Trigger: CTCCTCGACTCCTAAGGACAACTGATCACAGCTCCATGGAAGTGCTAACAAGTTTGCTGAAATGTCACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 72 bp GACTCAGAGAAAGTAGGTAACTTGCTGGTAAGTGGCTaGGCCATGATCAAAGTGTTTTGGTCACCAAAGTTC +
Preference number: 3 (lower is better)
Translates to: DSEKVGNLLVSG*AMIKVFWSPKF
Trigger: GAACTTTGGTGACCAAAACACTTTGATCATGGCTCAGCCACTTACCAGCAAGTTACCTACTTTCTCTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR TCA 72 bp AGCTGTCACCCATTACGCCTGTGTTCTATAATTTTGTaGGCCTTTTCACATGAAAGACTACCCAAGGGTAGG +
Preference number: 3 (lower is better)
Translates to: SCHPLRLCSIIL*AFSHERLPKGR
Trigger: CCTACCCTTGGGTAGTCTTTCATGTGAAAAGGCTCACAAAATTATAGAACACAGGCGTAATGGGTGACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR GCA 72 bp TGCGCTAATGTCATTTCATCCTTAACCTTGTGTGGTTaGTGTCATCTCCACATTACAGATGGGGGAAATGAG +
Preference number: 3 (lower is better)
Translates to: CANVISSLTLCG*CHLHITDGGNE
Trigger: CTCATTTCCCCCATCTGTAATGTGGAGATGACAGCAACCACACAAGGTTAAGGATGAAATGACATTAGCGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CCA 72 bp CGTTCACCTGACCTAGTTTTCTGGGAGAAGTTTCTCTaGCAGACCTTGTTTTTAGATAGGCTCATGTCTCTT +
Preference number: 3 (lower is better)
Translates to: RSPDLVFWEKFL*QTLFLDRLMSL
Trigger: AAGAGACATGAGCCTATCTAAAAACAAGGTCTGCCAGAGAAACTTCTCCCAGAAAACTAGGTCAGGTGAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR TCA 72 bp ACCTTGTTTTTAGATAGGCTCATGTCTCTTTCTCCCTaGACAAAGGTTCTGGCTCTGTTAACCAAGTTTGGG +
Preference number: 3 (lower is better)
Translates to: TLFLDRLMSLSP*TKVLALLTKFG
Trigger: CCCAAACTTGGTTAACAGAGCCAGAACCTTTGTTCAGGGAGAAAGAGACATGAGCCTATCTAAAAACAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CCA 72 bp CTCATTCCCAGACACAGAATCTTTCTAGAATCTTACTaGGTTACTAGCCAACCAATATTTACTAATAAGGTA +
Preference number: 3 (lower is better)
Translates to: LIPRHRIFLESY*VTSQPIFTNKV
Trigger: TACCTTATTAGTAAATATTGGTTGGCTAGTAACCCAGTAAGATTCTAGAAAGATTCTGTGTCTGGGAATGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp TGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGTGCTGCAGAGCGCACTaGTGGCCGCCGGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CCRGPAAPSALGSATTTTCCRAH*WPPALL
Trigger: CAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCA...CGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACTGCAGAGCGCACTGCTaGCCGCCGGCGCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNCRAHC*PPALLA
Trigger: TGCCAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCA...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR CCA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGTGCAGAGCGCACTGCTaGCCGCCGGCGCTCCTGCGA +
Preference number: 4 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLCRAHC*PPALLR
Trigger: TCGCAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCA...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCGGCAAGGAGCGGCATaGCGGCCAGCTGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNRQGAA*RPAGWR
Trigger: TCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCG...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATGTACCTGCGAGCGGATaGGCTGGGCGGCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHVPASG*AGRQRG
Trigger: TCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGTAC...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR TCA 90 bp CGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGTGAGCCCAGCCCAGCGGCAAGGAGCGGCATaGCGGCCAGCTGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: RSIRIGLRNHDHEVSPAQRQGAA*RPAGWR
Trigger: TCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCG...CTGGGCTGGGCTCACCTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp TGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGCACACAGGGCCTGGCTaGTGCCATCTGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CCRGPAAPSALGSATTTTHTGPG*CHLSCC
Trigger: GCAGCAGGACAGATGGCAGCAGCCAGGCCCTGTGTG...CGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACTTCCCCTCCAGGTGCTaGCGGTACCTGCGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNFPSRC*RYLRAD
Trigger: ATCCGCTCGCAGGTACCGCCAGCACCTGGAGGGGAA...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR CCA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGGGGTGTGGTCGGGTGTaGGGGAGGCTGTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLGCGRV*GRLCRF
Trigger: GAACCTGCACAGCCTCCCCCACACCCGACCACACCC...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACAGGTGCTGCTGCTCCTaGACCCGCACACGCACCTTG +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNRCCCS*TRTRTL
Trigger: CAAGGTGCGTGTGCGGGTCCAGGAGCAGCAGCACCT...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATCCGCCTGCTCCTAGATaGACGCCGGGGCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHPPAPR*TPGLLH
Trigger: GTGAAGGAGCCCCGGCGTTCATCTAGGAGCAGGCGG...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR GCA 90 bp CTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGTGTCAGCGTGGGGTCTaGCTCTTCTTCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSRASRSIRIGLRNHDHECQRGV*LFFCQG
Trigger: CCCCTGGCAGAAGAAGAGGCAGACCCCACGCTGACA...CTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGGGTGCTGGCGGTACCTaGGAGCGGATGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GQHPHQPVWHDGRAVAGQGAGGT*ERMRWA
Trigger: CGCCCAGCGCATCCGCTCGCAGGTACCGCCAGCACC...CTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR GCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACGTAAGCCCGGCCTCCTaGAGAAGCACCCACCCTTCT +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNVSPAS*RSTHPS
Trigger: AGAAGGGTGGGTGCTTCTGCAGGAGGCCGGGCTTAC...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR GCA 90 bp GAGGAGGGTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCCGTGGGAGGGTCTGTaGTGCTCAGGAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: EEGVVGCGGGCAGSPCGGPWEGL*CSGDGA
Trigger: AGCCCCATCTCCTGAGCAGCACAGACCCTCCCACGG...GCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACACCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAAAGAACACCGCCTGCTaGAGCAGCAGCTCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGKNTAC*SSSSVG
Trigger: GCCCACGGAGCTGCTGCTGCAGCAGGCGGTGTTCTT...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp CTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGCAGACTCCTGGGCCCTaGCCTTGGCCTTCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LSRASRSIRIGLRNHDHEQTPGP*PWPSGV
Trigger: AACACCTGAAGGCCAAGGCCAGGGCCCAGGAGTCTG...CTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACGGCATGACGGCCAGCTaGATGGAGAAAGCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNGMTAS*MEKALC
Trigger: GCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCC...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGACCGCTCCATCCGCATTaGGCTCCGCAACCACGACCA +
Preference number: 4 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGPLHPH*APQPRP
Trigger: TGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGG...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAATTGGGCCGTGCTGGTaGCCATCTCTGGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGIGPCW*PSLGTP
Trigger: TGGGGTCCCCAGAGATGGCCACCAGCACGGCCCAAT...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCGGCCCCGGCCCTCAGTaGCACCGCGATGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: VANILINLYGMTAVLSRAGPGPQ*HRDVHS
Trigger: CGAGTGGACATCGCGGTGCCACTGAGGGCCGGGGCC...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp TGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGCAGCTCCGTGGGCTaGAAGAGGTGCACGTGGTAC +
Preference number: 4 (lower is better)
Translates to: CCRGPAAPSALGSATTTTSSSVG*KRCTWY
Trigger: GTACCACGTGCACCTCTTCCAGCCCACGGAGCTGCT...CGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTCAACCTGTATGGCATaGCGGCCGTGCTGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHSTCMA*RPCCRG
Trigger: CCCGCGACAGCACGGCCGTCATGCCATACAGGTTGA...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp CGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGTGAGCCCAGCCCAGCTGAGAACACTCCTCTaGCTTGCGGTCCCGGTCGTG +
Preference number: 4 (lower is better)
Translates to: RSIRIGLRNHDHEVSPAQLRTLL*LAVPVV
Trigger: CACGACCGGGACCGCAAGTCAGAGGAGTGTTCTCAG...CTGGGCTGGGCTCACCTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GAGGAGGGTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCCGCAGTGTGTGGGCTaGACCTCACAGCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: EEGVVGCGGGCAGSPCGGPQCVG*TSQLWM
Trigger: CATCCACAGCTGTGAGGTTCAGCCCACACACTGCGG...GCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACACCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp GGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGAAGCGGGTGCTCCTGCGAGCGGATaGGCTGGGCGGCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: GASVIPDHHGGAAGTEAGAPASG*AGRQRG
Trigger: TCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGAGC...ACCCGCTTCAGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp CTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGATGGGCTCTATGCTTaGGGGGTCCTCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: LSRASRSIRIGLRNHDHEDGLYA*GVLFPL
Trigger: GAGTGGGAAGAGGACCCCGCAAGCATAGAGCCCATC...CTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp CGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGTGAGCCCAGCCCAGAGGACTCGATGCTGCTaGACGGGCGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RSIRIGLRNHDHEVSPAQRTRCC*TGGQSQ
Trigger: CTGACTCTGACCGCCCGTGCAGCAGCATCGAGTCCT...CTGGGCTGGGCTCACCTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GAGGAGGGTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCAGATGAGGACTCGATaGTGCTGCACGGGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: EEGVVGCGGGCAGSPCGGQMRTR*CCTGGQ
Trigger: CTGACCGCCCGTGCAGCAGCATCGAGTCCTCATCTG...GCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACACCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACTGGGAGGGTCTGTGCTaGTCAGGAGATGGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNWEGLC*SGDGAV
Trigger: AACAGCCCCATCTCCTGAGCAGCACAGACCCTCCCA...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp CGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGTGAGCCCAGCCCAGAGCACATCCAGGTGCTaGTGCTCCTGGACCCGCACA +
Preference number: 4 (lower is better)
Translates to: RSIRIGLRNHDHEVSPAQSTSRC*CSWTRT
Trigger: TGTGCGGGTCCAGGAGCAGCAGCACCTGGATGTGCT...CTGGGCTGGGCTCACCTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp CGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGTGAGCCCAGCCCAGTGGTTCTCCCACAGCTaGCTCAAGCCTTGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: RSIRIGLRNHDHEVSPAQWFSHS*LKPWSA
Trigger: GGCCGACCAAGGCTTGAGGCAGCTGTGGGAGAACCA...CTGGGCTGGGCTCACCTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGCATGACGGCCAGCTaGATGGAGAAAGCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGGMTAS*MEKALC
Trigger: GCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCC...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCGGCCGCCGGCGCTCCTaGCAGGGAGAAAGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VANILINLYGMTAVLSRAGRRRS*QGESEG
Trigger: GCCTTCACTTTCTCCCTGCCAGGAGCGCCGGCGGCC...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR CCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATACCATGCGGTGGCCGTaGGAGGGTCTGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHTMRWP*EGLCCS
Trigger: TGAGCAGCACAGACCCTCCCACGGCCACCGCATGGT...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATAGGTTCACCATGCGGTaGCCGTGGGAGGGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHRFTMR*PWEGLC
Trigger: GCACAGACCCTCCCACGGCCACCGCATGGTGAACCT...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGATTGTTGAGGAGGGTGTaGTCGGGTGTGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGLLRRV*SGVGEA
Trigger: AGCCTCCCCCACACCCGACCACACCCTCCTCAACAA...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGACTAGGTAGTTGCCCCTaGGCATTGGGCCGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGLGSCP*ALGRAG
Trigger: ACCAGCACGGCCCAATGCCCAGGGGCAACTACCTAG...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp TGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGCACAGGGAAGGCCAGTaGGATGGTGAATTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CCRGPAAPSALGSATTTTHREGQ*DGEFAG
Trigger: CCCTGCAAATTCACCATCTCACTGGCCTTCCCTGTG...CGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATCTGGCAGGGAGAAAGTaGAGGCTGTCCCCGCCTGTA +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHLAGRK*RLSPPV
Trigger: TACAGGCGGGGACAGCCTTCACTTTCTCCCTGCCAG...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR TCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATAGGAGCAGCTGGTACTaGAGCGGGTGGCCAACATCC +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHRSSWY*SGWPTS
Trigger: GGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCT...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp CTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGCCAGGCCTTCCAGGATaGAAAGGTGTGTCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: LSRASRSIRIGLRNHDHEPGLPG*KGVSSR
Trigger: ACGGGAAGACACACCTTTTCATCCTGGAAGGCCTGG...CTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp ACAGCTCCTGGGGGTAGCCCTCATGCTCCCGCAGGATCCTCTTTAACAAAGCTGGCTCCTGCGAGCGGATaGGCTGGGCGGCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: TAPGGSPHAPAGSSLTKLAPASG*AGRQRG
Trigger: TCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGAGC...CAGCTTTGTTAAAGAGGATCCTGCGGGAGCATGAGGGCTACCCCCAGGAGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAAGGAGATGGGCTCTATaGTTGCGGGGTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGRRWAL*LRGPLP
Trigger: GGGAAGAGGACCCCGCAAGCATAGAGCCCATCTCCT...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGATGGAGAAAGCGCTCTaGTTCCTGGGGCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLMEKAL*FLGPVS
Trigger: GCTGACAGGCCCCAGGAAGCAGAGCGCTTTCTCCAT...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGATGTTACAGGCTTTGGTaGGGGCGAAGGGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGCYRLW*GRREQL
Trigger: GAGCTGCTCCCTTCGCCCGCACCAAAGCCTGTAACA...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGATCCACAGCCACCTaGGCGAAGAGACTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGGSTAT*AKRLQD
Trigger: GTCTTGGAGTCTCTTCGCCCAGGTGGCTGTGGATCC...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp GAGGAGGGTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCAGGGAGGGACCATGTaGGGGACTGGTCTAGGTAGT +
Preference number: 4 (lower is better)
Translates to: EEGVVGCGGGCAGSPCGGQGGTM*GTGLGS
Trigger: ACTACCTAGACCAGTCCCCCACATGGTCCCTCCCTG...GCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACACCCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACAGATGTCGTGGATCCTaGCTAGAGCCTGGAAGACCC +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNRCRGS*LEPGRP
Trigger: GGGTCTTCCAGGCTCTAGCCAGGATCCACGACATCT...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACGGTAGTCCTCAAGATTaGGGGCAGGCTGAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNGSPQD*GQAEVV
Trigger: TACCACCTCAGCCTGCCCCCAATCTTGAGGACTACC...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCCTCACAGCTGTGGATaGGGACGGCCAGATTCAAGT +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNPHSCG*GRPDSS
Trigger: ACTTGAATCTGGCCGTCCCCATCCACAGCTGTGAGG...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGGGCATTGGGCCGTGCTaGTGGCCATCTCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: GQHPHQPVWHDGRAVAGQGIGPC*WPSLGT
Trigger: GGTCCCCAGAGATGGCCACCAGCACGGCCCAATGCC...CTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCCAGGATCAGCAGCTCTaGCCCCGGCCCTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: VANILINLYGMTAVLSRAQDQQL*PRPSVA
Trigger: TGCCACTGAGGGCCGGGGCCAGAGCTGCTGATCCTG...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGTTCCCGTCCAGCAGGTaGAAGCCAGTGAGCACATCC +
Preference number: 4 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLFPSSR*KPVSTS
Trigger: GGATGTGCTCACTGGCTTCCACCTGCTGGACGGGAA...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGACTCCCACGTCGTCTGTaGAGCCGGCAGTCTTTAATC +
Preference number: 4 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGLPRRL*SRQSLI
Trigger: GATTAAAGACTGCCGGCTTCACAGACGACGTGGGAG...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGCTGGAAGTTGAGGTATaGATCCAGAGGGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLLEVEV*IQRVLP
Trigger: GGGGAGGACCCTCTGGATTCATACCTCAACTTCCAG...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATTGCTGCAGAGCGCACTaGTGGCCGCCGGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHCCRAH*WPPALL
Trigger: CAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCA...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGGTGTGGGGGAGGCTGTaGAGGTTCACCATGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GQHPHQPVWHDGRAVAGQVWGRL*RFTMRW
Trigger: CCACCGCATGGTGAACCTGCACAGCCTCCCCCACAC...CTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGACTTAGGTCACTGGGGTaGAGTGCCCCAAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGLRSLG*SAPRKM
Trigger: CATCTTCCTTGGGGCACTGCACCCCAGTGACCTAAG...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp GAGGAGGGTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCATCATGGTGATGTCCTaGAGCAGGCTGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: EEGVVGCGGGCAGSPCGGIMVMS*SRLWSR
Trigger: CCTGCTCCACAGCCTGCTGCAGGACATCACCATGAT...GCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACACCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCATGCGAGCGGATGCGCTaGGCGGCAGCGGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPCERMR*AAAGSW
Trigger: CCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCA...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp TGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACGCACGTGCAGGAGCCTaGCGAGGTCGGGGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: WGTGLGSESPLGASVIPDARAGA*RGRGGQ
Trigger: TTGCCCTCCCCGACCTCGCCAGGCTCCTGCACGTGC...GTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR CCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCGCTGGTGGCCATCTCTaGGGACCCCAAGCCCCACAA +
Preference number: 4 (lower is better)
Translates to: VANILINLYGMTAVLSRAAGGHL*GPQAPQ
Trigger: TTGTGGGGCTTGGGGTCCCCAGAGATGGCCACCAGC...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAAGAGACTCCAAGACTaGGAGGAGCGTCCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: VANILINLYGMTAVLSRAKRLQD*EERPPV
Trigger: CACCGGCGGACGCTCCTCTCAGTCTTGGAGTCTCTT...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCGCTGGCAGGCTCAGATaGGGACTCGATGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VANILINLYGMTAVLSRAAGRLR*GLDAAA
Trigger: TGCAGCAGCATCGAGTCCTCATCTGAGCCTGCCAGC...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GAGGAGGGTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCAGTCAAAGACGAAGATaGTGCGGCCAAACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: EEGVVGCGGGCAGSPCGGSQRRR*CGQTGS
Trigger: GCTCCCAGTTTGGCCGCATCATCTTCGTCTTTGACT...GCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACACCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCTGTCAGCGTGGGGTCTaGCTCTTCTTCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ANILINLYGMTAVLSRASCQRGV*LFFCQG
Trigger: CCCCTGGCAGAAGAAGAGGCAGACCCCACGCTGACA...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATGGGAGAGGGGACGTCTaGTCAGGCAGGCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHGRGDV*SGRPAA
Trigger: CGCAGCAGGCCTGCCTGAGCAGACGTCCCCTCTCCC...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR CCA 90 bp GTCAGGGAGACATACACCAGAACAGAATTCCAGGCTGCGGGCTCACAGCCTCCAGCGGGGCAGGTCCCATaGTACGCTCCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VRETYTRTEFQAAGSQPPAGQVP*YAPPGG
Trigger: TCCTCCTGGGGGAGCGTACCATGGGACCTGCCCCGC...TGGAGGCTGTGAGCCCGCAGCCTGGAATTCTGTTCTGGTGTATGTCTCCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCATGTGCACTGGGTGCTaGGCTCGGGGCATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ANILINLYGMTAVLSRASMCTGC*ARGISS
Trigger: TGAGCTGATGCCCCGAGCCCAGCACCCAGTGCACAT...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR CCA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCTTGTTGAGGAGGGTGTaGTCGGGTGTGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ANILINLYGMTAVLSRASLLRRV*SGVGEA
Trigger: AGCCTCCCCCACACCCGACCACACCCTCCTCAACAA...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCCTGGCCGCAGTGTGTaGGCTGAACCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: ANILINLYGMTAVLSRASPGRSV*AEPHSC
Trigger: ACAGCTGTGAGGTTCAGCCCACACACTGCGGCCAGG...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp TCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGGGGCACGTCGGAGCTaGAAGTGCTGGCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SPLGASVIPDHHGGAAGTGARRS*KCWQAQ
Trigger: CTGAGCCTGCCAGCACTTTCAGCTCCGACGTGCCCC...AGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGGGGCACGTCGGAGCTaGAAGTGCTGGCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAGARRS*KCWQAQ
Trigger: CTGAGCCTGCCAGCACTTTCAGCTCCGACGTGCCCC...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GAGGAGGGTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCAGCCTCTCTAGTTCCTaGATGGGTACAGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: EEGVVGCGGGCAGSPCGGSLSSS*MGTGCD
Trigger: ATCACAGCCTGTACCCATTCAGGAACTAGAGAGGCT...GCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACACCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGGCTTTGTCACCTTCGTaGCACGGCTTCACAGTCTTT +
Preference number: 4 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLALSPS*HGFTVF
Trigger: AAAGACTGTGAAGCCGTGGCACGAAGGTGACAAAGC...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp TGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGGTGATATTAAAAGTCTaGTCCCACGACACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CCRGPAAPSALGSATTTTVILKV*SHDTQA
Trigger: AGCCTGGGTGTCGTGGGAGCAGACTTTTAATATCAC...CGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp ATTGACACCAACCCAAGAGCGCGAGAGGAGGATGACGACTGGCACCTGTGGAACGTCCCGGGCCAGGTGTaGACAGCCATCTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: IDTNPRAREEDDDWHLWNVPGQV*TAICTG
Trigger: GCCTGTGCAGATGGCTGTGCACACCTGGCCCGGGAC...GTTCCACAGGTGCCAGTCGTCATCCTCCTCTCGCGCTCTTGGGTTGGTGTCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp GGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGATGGCACTCCGCCACTaGAGGTACTTCTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GQHPHQPVWHDGRAVAGQMALRH*RYFSWW
Trigger: CCACCAGGAGAAGTACCTGCAGTGGCGGAGTGCCAT...CTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATCCTGGCGGATGTTCCTaGTTCGACTCTTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHPGGCS*FDSSLT
Trigger: TGTCAGAGAAGAGTCGAACCAGGAACATCCGCCAGG...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp CTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGGAGTCTTATGGAACTaGTACTTGCAGTACACAGGC +
Preference number: 4 (lower is better)
Translates to: LSRASRSIRIGLRNHDHEGVLWN*YLQYTG
Trigger: GCCTGTGTACTGCAAGTACCAGTTCCATAAGACTCC...CTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
3UTR CAA 72 bp TGCCCACGGCATCAGGAGGCCCAGCTTGGCAAACCCTaGCCTGTTACCTGTTACAGGCTTTGGTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: CPRHQEAQLGKP*PVTCYRLWCGR
Trigger: TCGCCCGCACCAAAGCCTGTAACAGGTAACAGGCAAGGGTTTGCCAAGCTGGGCCTCCTGATGCCGTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACGCATATTTTCCCTTCTaGCCCATATTCACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNAYFPF*PIFTGK
Trigger: CTTCCCTGTGAATATGGGTCAGAAGGGAAAATATGC...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATAATGCCTGCCCCAGGTaGGCAGCTCCCGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TGLGSESPLGASVIPDHHNACPR*AAPGSH
Trigger: GTGGCTCCCGGGAGCTGCTCACCTGGGGCAGGCATT...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR TCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATAATGAAGTTGATTGTTaGGGAGGGTGTGGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHNEVDC*GGCGRV
Trigger: CACCCGACCACACCCTCCTCAACAATCAACTTCATT...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTTCAACCTGTATGGCATaGCGGCCGTGCTGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRASTCMA*RPCCRG
Trigger: CCCGCGACAGCACGGCCGTCATGCCATACAGGTTGA...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp TGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACAGGAGCAGCTGGTACTaGAGCGGGTGGCCAACATCC +
Preference number: 4 (lower is better)
Translates to: WGTGLGSESPLGASVIPDRSSWY*SGWPTS
Trigger: GGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCT...GTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCCGTGGGAGGGTCTGTaGTGCTCAGGAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHPWEGL*CSGDGA
Trigger: AGCCCCATCTCCTGAGCAGCACAGACCCTCCCACGG...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTGTGGGGGAGGCTGTaGAGGTTCACCATGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAVWGRL*RFTMRW
Trigger: CCACCGCATGGTGAACCTGCACAGCCTCCCCCACAC...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGTGAGCACATCCAGGTaGTGCTGCTCCTGGACCCGC +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPVSTSR*CCSWTR
Trigger: GCGGGTCCAGGAGCAGCAGCACCTGGATGTGCTCAC...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp AGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGTCTGTGGGCTGGAAGAGGTaGACGTGGTACAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SLLEGGFTLGWWRVRPQSVGWKR*TWYRMA
Trigger: GGCCATCCTGTACCACGTGCACCTCTTCCAGCCCAC...AGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp AGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTCTTCAGGAAGAACACCGCCTaGTGCAGCAGCAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SHSSNCGPGTCPQRAGLFRKNTA*CSSSSV
Trigger: CACGGAGCTGCTGCTGCAGCAGGCGGTGTTCTTCCT...GAAGAGACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGTGCAGAGCGCACTGCTaGCCGCCGGCGCTCCTGCGA +
Preference number: 4 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWCRAHC*PPALLR
Trigger: TCGCAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCA...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTACCATGCGGTGGCCGTaGGAGGGTCTGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRATMRWP*EGLCCS
Trigger: TGAGCAGCACAGACCCTCCCACGGCCACCGCATGGT...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTAGGTTCACCATGCGGTaGCCGTGGGAGGGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRARFTMR*PWEGLC
Trigger: GCACAGACCCTCCCACGGCCACCGCATGGTGAACCT...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCCCTCATCAACCTGTATaGCATGACGGCCGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: VANILINLYGMTAVLSRAPHQPV*HDGRAV
Trigger: GACAGCACGGCCGTCATGCCATACAGGTTGATGAGG...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCGTGAATCTCTTTCTTaGCTCCTTGGCTATCTCTTG +
Preference number: 4 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNRESLS*LLGYLL
Trigger: CAAGAGATAGCCAAGGAGCCAAGAAAGAGATTCACG...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp TCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTAGCTGCCTCAAGCCTTaGTCGGCCAGGCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SPLGASVIPDHHGGAAGTSCLKP*SARPSR
Trigger: CCTGGAAGGCCTGGCCGACCAAGGCTTGAGGCAGCT...AGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCCTGGGAATCCAGCTTTaGTGGTTCTCCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: VANILINLYGMTAVLSRALGIQL*WFSHSC
Trigger: GCAGCTGTGGGAGAACCACCAAAGCTGGATTCCCAG...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GAACCACCCTTTGGTGATGGCCTCGGGTCCCCTTTGTCCTCACCCTGCAAGGAGTGGAAGAGGTGCACGTaGTACAGGATGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EPPFGDGLGSPLSSPCKEWKRCT*YRMASR
Trigger: CCTGGAGGCCATCCTGTACCACGTGCACCTCTTCCA...CTCCTTGCAGGGTGAGGACAAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GAACCACCCTTTGGTGATGGCCTCGGGTCCCCTTTGTCCTCACCCTGCAAGGAGGACAGCTCTCCTAGCTaGAGCCTCCTTGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: EPPFGDGLGSPLSSPCKEDSSPS*SLLESH
Trigger: GTGGCTCTCAAGGAGGCTCCAGCTAGGAGAGCTGTC...CTCCTTGCAGGGTGAGGACAAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp AGTCCACGTGGTGCCTGTCCCAGCTCCACCTGTCTCGATCCAACACAGGCTCCAGGCTTCACTCTAGGCTaGTGGCGTGTAAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SPRGACPSSTCLDPTQAPGFTLG*WRVRPQ
Trigger: CTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCC...TGGAGCCTGTGTTGGATCGAGACAGGTGGAGCTGGGACAGGCACCACGTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp AGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGTCTGCTGAGCTGGCTGAGTaGGGCTGGCCTGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: SLLEGGFTLGWWRVRPQSAELAE*GWPEHS
Trigger: AGAATGCTCAGGCCAGCCCCACTCAGCCAGCTCAGC...AGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATGCTGGCAGGCTCAGATaGGGACTCGATGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHAGRLR*GLDAAA
Trigger: TGCAGCAGCATCGAGTCCTCATCTGAGCCTGCCAGC...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp AACTATGATAACCACCACAGCCACCACCACACCACAGGTTGGCTGAGTGGGTCAGGGGCACGTCGGAGCTaGAAGTGCTGGCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NYDNHHSHHHTTGWLSGSGARRS*KCWQAQ
Trigger: CTGAGCCTGCCAGCACTTTCAGCTCCGACGTGCCCC...TGACCCACTCAGCCAACCTGTGGTGTGGTGGTGGCTGTGGTGGTTATCATAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGGTTCGACTCTTCTCTaGCAATGTTGGTATTCTCAA +
Preference number: 4 (lower is better)
Translates to: LSRASRSIRIGLRNHDHEGSTLL*QCWYSQ
Trigger: TTGAGAATACCAACATTGTCAGAGAAGAGTCGAACC...CTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCACATGTAGCGACATGCTaGAGAGCGCACTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPHVATC*RAHCWP
Trigger: CGGCCAGCAGTGCGCTCTGCAGCATGTCGCTACATG...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp TCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTCATGTAGCGACATGCTaGAGAGCGCACTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SPLGASVIPDHHGGAAGTHVATC*RAHCWP
Trigger: CGGCCAGCAGTGCGCTCTGCAGCATGTCGCTACATG...AGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCAGGACTCGATGCTGCTaGACGGGCGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGRTRCC*TGGQSQ
Trigger: CTGACTCTGACCGCCCGTGCAGCAGCATCGAGTCCT...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp ATTGACACCAACCCAAGAGCGCGAGAGGAGGATGACGACTGGCACCTGTGGAACCAACGCACGCGCTTCTaGAGAGTAGCCAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: IDTNPRAREEDDDWHLWNQRTRF*RVARRG
Trigger: CCCTCTCCTGGCTACTCTGCAGAAGCGCGTGCGTTG...GTTCCACAGGTGCCAGTCGTCATCCTCCTCTCGCGCTCTTGGGTTGGTGTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCAACACTCCTCTGACTTaGGGTCCCGGTCGTGAACTT +
Preference number: 4 (lower is better)
Translates to: ANILINLYGMTAVLSRASNTPLT*GPGREL
Trigger: AAGTTCACGACCGGGACCGCAAGTCAGAGGAGTGTT...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp GGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGAAGCGGGTTCAAAGTCCACGTGGTaGCTGTCCCAGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GASVIPDHHGGAAGTEAGSKSTW*LSQLHL
Trigger: CAGGTGGAGCTGGGACAGGCACCACGTGGACTTTGA...ACCCGCTTCAGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp GGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGAAGCGGGTAAGGCTGACAGGATCTaGTGCAGGGTCCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: GASVIPDHHGGAAGTEAGKADRI*CRVLTG
Trigger: CCCTGTCAGGACCCTGCAGCAGATCCTGTCAGCCTT...ACCCGCTTCAGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTCCCCATAGAGCCGGCTaGGGAACAGCAGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAPHRAG*GTAAVS
Trigger: ACTCACAGCTGCTGTTCCGCAGCCGGCTCTATGGGG...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGTGGGCTGGAAGAGGTaGACGTGGTACAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPVGWKR*TWYRMA
Trigger: GGCCATCCTGTACCACGTGCACCTCTTCCAGCCCAC...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCAGGAAGAACACCGCCTaGTGCAGCAGCAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGRKNTA*CSSSSV
Trigger: CACGGAGCTGCTGCTGCAGCAGGCGGTGTTCTTCCT...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAATCCTGGCTAGAGCCTaGAAGACCCGCCTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPILARA*KTRLRS
Trigger: TGAGCGGAGGCGGGTCTTCCAGGCTCTAGCCAGGAT...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGCCAGGGGCTCCACCATaGCTGAGAGGTAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQPGAPP*LRGNPV
Trigger: CACAGGATTACCTCTCAGCCATGGTGGAGCCCCTGG...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp TGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACGACTGTTACAGGCTTTaGTGCGGGCGAAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WGTGLGSESPLGASVIPDDCYRL*CGRREQ
Trigger: CTGCTCCCTTCGCCCGCACCAAAGCCTGTAACAGTC...GTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp CGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGTGAGCCCAGCCCAGGGCAATCTAAAATGTTaGCAGACTTCTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: RSIRIGLRNHDHEVSPAQGNLKC*QTSHCH
Trigger: GTGGCAGTGAGAAGTCTGCCAACATTTTAGATTGCC...CTGGGCTGGGCTCACCTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp TTGAGAGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCGGAGAAAGGTCCCTATaGACACCCCACCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: LRATAVTVGLGHAHREQVGERSL*TPHLRP
Trigger: GGGTCTCAGGTGGGGTGTCCATAGGGACCTTTCTCC...GACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCTCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp AAACAAGTCCCGGGCCAGGTGTGCACAGCCATCTGCACAGGCTGTGAACAGAGGAGGCCAGTGAGATGGTaGATTTGCAGGGGACCACGT +
Preference number: 4 (lower is better)
Translates to: KQVPGQVCTAICTGCEQRRPVRW*ICRGPR
Trigger: ACGTGGTCCCCTGCAAATTCACCATCTCACTGGCCT...CCTCTGTTCACAGCCTGTGCAGATGGCTGTGCACACCTGGCCCGGGACTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGTCTCAATTAATTCCTTaGTCTCCATCATGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LSRASRSIRIGLRNHDHESQLIP*SPSCLL
Trigger: GAGCAAGCATGATGGAGATCAAGGAATTAATTGAGA...CTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCGGCAAGGAGCGGCATaGCGGCCAGCTGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFRQGAA*RPAGWR
Trigger: TCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCG...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp CACAGCCTCCACACTGCTGACAGTTGGGGCAGACCATTCTTTGCTCAGGGGACACATCTGCACAGGCTGTaGACAGAGGCGTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: HSLHTADSWGRPFFAQGTHLHRL*TEACTA
Trigger: AGCTGTGCACGCCTCTGTTCACAGCCTGTGCAGATG...TGTCCCCTGAGCAAAGAATGGTCTGCCCCAACTGTCAGCAGTGTGGAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCAATGAAGTTGATTGTTaGGGAGGGTGTGGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: ANILINLYGMTAVLSRASNEVDC*GGCGRV
Trigger: CACCCGACCACACCCTCCTCAACAATCAACTTCATT...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCTCCCCCTTGGTCTTGTaGACTGGAGTCTTATGGAAC +
Preference number: 4 (lower is better)
Translates to: ANILINLYGMTAVLSRASSPLVL*TGVLWN
Trigger: GTTCCATAAGACTCCAGTTCACAAGACCAAGGGGGA...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATTTGCGGTCCCGGTCGTaGACTTCCACCACCATGGGG +
Preference number: 4 (lower is better)
Translates to: TGLGSESPLGASVIPDHHLRSRS*TSTTMG
Trigger: CCCCATGGTGGTGGAAGTTCACGACCGGGACCGCAA...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGAAGCGGGTCGTGGATCTCTAAGGTaGGGGTGGAGTTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: GASVIPDHHGGAAGTEAGRGSLR*GWSSDC
Trigger: ACAGTCGGAACTCCACCCTCACCTTAGAGATCCACG...ACCCGCTTCAGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGGGCAGCTTGAGATCCTaGAAGCTGCTTTCGGTGTCG +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQGSLRS*KLLSVS
Trigger: CGACACCGAAAGCAGCTTTCAGGATCTCAAGCTGCC...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATTCTGCTGCAGGGTCCTaGCAGGGTAGGAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TGLGSESPLGASVIPDHHSAAGS*QGRSPG
Trigger: GCCTGGACTCCTACCCTGTCAGGACCCTGCAGCAGA...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATACGCACCTTGAAGGCTaGCAGGATCTGCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHTHLEG*QDLLQG
Trigger: ACCCTGCAGCAGATCCTGTCAGCCTTCAAGGTGCGT...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGCCCGCACACGCACCTTaGAGGCTGACAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: EQLVLKRVANILINLYGMPAHAP*RLTGSA
Trigger: AGCAGATCCTGTCAGCCTTCAAGGTGCGTGTGCGGG...CATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGACCAGACCCAGGGCATaGAGGGATTTGCCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQTRPRA*RDLPQV
Trigger: GACTTGAGGCAAATCCCTTCATGCCCTGGGTCTGGT...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp TCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTAGGCATGTAGCGACATaGTGCAGAGCGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPLGASVIPDHHGGAAGTRHVAT*CRAHCW
Trigger: CCAGCAGTGCGCTCTGCAGCATGTCGCTACATGCCT...AGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGATGGGCTCTATGCTTaGGGGGTCCTCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPDGLYA*GVLFPL
Trigger: GAGTGGGAAGAGGACCCCGCAAGCATAGAGCCCATC...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp TCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTAGGAGATGGGCTCTATaGTTGCGGGGTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SPLGASVIPDHHGGAAGTRRWAL*LRGPLP
Trigger: GGGAAGAGGACCCCGCAAGCATAGAGCCCATCTCCT...AGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCATGAGGACTCGATGCTaGTGCACGGGCGGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGMRTRC*CTGGQS
Trigger: ACTCTGACCGCCCGTGCAGCAGCATCGAGTCCTCAT...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGCAGATGAGGACTCGATaGTGCTGCACGGGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: EQLVLKRVANILINLYGMQMRTR*CCTGGQ
Trigger: CTGACCGCCCGTGCAGCAGCATCGAGTCCTCATCTG...CATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp AACTATGATAACCACCACAGCCACCACCACACCACAGGTTGGCTGAGTGGGTCATGGCCTCAGGACAGCTaGTGCCTCCACACCTGCACC +
Preference number: 4 (lower is better)
Translates to: NYDNHHSHHHTTGWLSGSWPQDS*CLHTCT
Trigger: GGTGCAGGTGTGGAGGCAGCAGCTGTCCTGAGGCCA...TGACCCACTCAGCCAACCTGTGGTGTGGTGGTGGCTGTGGTGGTTATCATAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCTGGGAGGGTCTGTGCTaGTCAGGAGATGGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGWEGLC*SGDGAV
Trigger: AACAGCCCCATCTCCTGAGCAGCACAGACCCTCCCA...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGACAGCCTCTAGGTAGTTaGCCCTGGGCATTGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LGSESPLGASVIPDHHGGQPLGS*PWALGR
Trigger: ACGGCCCAATGCCCAGGGGCAACTACCTAGAGGCTG...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp CCTGTCCCAGCTCCACCTGTCTCGATCCAACACAGGCTCCAGTACATTAGCAAAGTGGCACAGAGCTCCTaGCTGCCCACGGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: PVPAPPVSIQHRLQYISKVAQSS*LPTASG
Trigger: TCCTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCAC...TTTGCTAATGTACTGGAGCCTGTGTTGGATCGAGACAGGTGGAGCTGGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp GGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGACCCCCCCCAGGAGACTTTTaGTGGGAAGGCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GCLEFLCTGEVWGGAVRPPPGDF*WEGWQW
Trigger: CCACTGCCAGCCTTCCCAGCAAAAGTCTCCTGGGGG...GGGTCTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGGATCCACAGCCACCTaGGCGAAGAGACTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAGSTAT*AKRLQD
Trigger: GTCTTGGAGTCTCTTCGCCCAGGTGGCTGTGGATCC...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp TGGTTAAGAGTGGAATGGTGTAAGGGAATGTTTGTGCTCCTCCAACAGCCAGTCTGCGAGCGGATGCGCTaGGCGGCAGCGGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: WLRVEWCKGMFVLLQQPVCERMR*AAAGSW
Trigger: CCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCA...GACTGGCTGTTGGAGGAGCACAAACATTCCCTTACACCATTCCACTCTTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGACAGACTCCTGGGCCCTaGCCTTGGCCTTCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LGSESPLGASVIPDHHGGQTPGP*PWPSGV
Trigger: AACACCTGAAGGCCAAGGCCAGGGCCCAGGAGTCTG...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGCTCCTGCCAAAGAAATaGTTGGTGTTCTTGAAACAC +
Preference number: 4 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLLLPKK*LVFLKH
Trigger: GTGTTTCAAGAACACCAACCATTTCTTTGGCAGGAG...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGATGGGGCCTGTCAGCGTaGGGTCTGCCTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LGSESPLGASVIPDHHGGWGLSA*GLPLLL
Trigger: CAGAAGAAGAGGCAGACCCCACGCTGACAGGCCCCA...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp AGGTCCCATGGTACGCTCCCCCAGGAGGATCATGGGTTCCTCCTTGGGACTGTAAGGAGCATCCGCTTATaGCCGTTCTGGCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: RSHGTLPQEDHGFLLGTVRSIRL*PFWPQD
Trigger: GTCTTGTGGCCAGAACGGCCATAAGCGGATGCTCCT...TACAGTCCCAAGGAGGAACCCATGATCCTCCTGGGGGAGCGTACCATGGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp AGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGTCTAGATGTCGTGGATCCTaGCTAGAGCCTGGAAGACCC +
Preference number: 4 (lower is better)
Translates to: SLLEGGFTLGWWRVRPQSRCRGS*LEPGRP
Trigger: GGGTCTTCCAGGCTCTAGCCAGGATCCACGACATCT...AGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGGGTAGTCCTCAAGATTaGGGGCAGGCTGAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQGSPQD*GQAEVV
Trigger: TACCACCTCAGCCTGCCCCCAATCTTGAGGACTACC...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCCAGGGGCTCCACCATaGCTGAGAGGTAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHPGAPP*LRGNPV
Trigger: CACAGGATTACCTCTCAGCCATGGTGGAGCCCCTGG...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCATGATGCGGCCAAACTaGGAGCCCCCAAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGMMRPN*EPPRSG
Trigger: TCCTGACCTTGGGGGCTCCCAGTTTGGCCGCATCAT...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGAAGCGGGTTCCTGCAGCAGGCTGTaGAGCAGGGAGACCTTCTTA +
Preference number: 4 (lower is better)
Translates to: GASVIPDHHGGAAGTEAGSCSRL*SRETFL
Trigger: TAAGAAGGTCTCCCTGCTCCACAGCCTGCTGCAGGA...ACCCGCTTCAGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGCACGTGGTACAGGATaGCCTCCAGGTCCCCATAGA +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAARGTG*PPGPHR
Trigger: TCTATGGGGACCTGGAGGCCATCCTGTACCACGTGC...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGTGGGAAGGCTGGCAGTaGAGCTCACTAGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQWEGWQ*SSLGSL
Trigger: AAGGCTTCCTAGTGAGCTCCACTGCCAGCCTTCCCA...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp TGCAGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGTTCACTCTAGGCTGGTaGCGTGTAAGGCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: CSLLEGGFTLGWWRVRPQFTLGW*RVRPQS
Trigger: AGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAA...CTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GGCTGGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAGTTCCTGGCTGAGTGGGGCTaGCCTGAGCATTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GWWRVRPQSYMPMENGKFLAEWG*PEHSAR
Trigger: CCTGGCAGAATGCTCAGGCCAGCCCCACTCAGCCAG...GAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp AGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGTCTAGGCAAGGAGGAGACTaGGAACTTGGAGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SLLEGGFTLGWWRVRPQSRQGGD*ELGELS
Trigger: GCTCAGCTCTCCAAGTTCCCAGTCTCCTCCTTGCCT...AGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CAA 72 bp GCTTGGCAAACCCTTGCCTGTTACCTGTTACAGGCTTaGGTGCGGGCGAAGGGAGCAGCTCGAGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: AWQTLACYLLQA*VRAKGAARGKV
Trigger: CACCTTTCCTCGAGCTGCTCCCTTCGCCCGCACCAAAGCCTGTAACAGGTAACAGGCAAGGGTTTGCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGAGGCCAGTGAGATGGTaGATTTGCAGGGGACCACGT +
Preference number: 4 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWRPVRW*ICRGPR
Trigger: ACGTGGTCCCCTGCAAATTCACCATCTCACTGGCCT...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp CTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGTCCAGAGCCTCAAGGTaGTTTTGTGGAAATTTATTT +
Preference number: 4 (lower is better)
Translates to: LSRASRSIRIGLRNHDHESRASR*FCGNLF
Trigger: AAATAAATTTCCACAAAATCACCTTGAGGCTCTGGA...CTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCTCCCACGTCGTCTGTaGAGCCGGCAGTCTTTAATC +
Preference number: 4 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWLPRRL*SRQSLI
Trigger: GATTAAAGACTGCCGGCTTCACAGACGACGTGGGAG...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCTCACTTCTGACTTATaGAAAGCTCCCACGTCGTCT +
Preference number: 4 (lower is better)
Translates to: ANILINLYGMTAVLSRASLTSDL*KAPTSS
Trigger: AGACGACGTGGGAGCTTTTCATAAGTCAGAAGTGAG...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp CGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGTGAGCCCAGCCCAGAAGAATCGTCCATTTTaGGGGACTTCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: RSIRIGLRNHDHEVSPAQKNRPF*GTSHIP
Trigger: AGGAATATGAGAAGTCCCTCAAAATGGACGATTCTT...CTGGGCTGGGCTCACCTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GAGGAGGGTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCAATGGTTGGTGTTCTTaGAACACTCCATTGAATCGT +
Preference number: 4 (lower is better)
Translates to: EEGVVGCGGGCAGSPCGGNGWCS*NTPLNR
Trigger: ACGATTCAATGGAGTGTTTCAAGAACACCAACCATT...GCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACACCCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGTCTCAATTAATTCCTTaGTCTCCATCATGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLSQLIP*SPSCLL
Trigger: GAGCAAGCATGATGGAGATCAAGGAATTAATTGAGA...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp AAACAAGTCCCGGGCCAGGTGTGCACAGCCATCTGCACAGGCTGTGAACAGAGGTGGCACCTGTGGAACTaGACTGGAGGCTCTGACTTA +
Preference number: 4 (lower is better)
Translates to: KQVPGQVCTAICTGCEQRWHLWN*TGGSDL
Trigger: TAAGTCAGAGCCTCCAGTTCAGTTCCACAGGTGCCA...CCTCTGTTCACAGCCTGTGCAGATGGCTGTGCACACCTGGCCCGGGACTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCCCCAAGACAGAACATaGATGTGCACTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWPQDRT*MCTGCW
Trigger: CCAGCACCCAGTGCACATTCATGTTCTGTCTTGGGG...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR TCA 90 bp TCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTCACTTGGAGCCTCTGTaGTCCCAGACCATCATGGAG +
Preference number: 4 (lower is better)
Translates to: SPLGASVIPDHHGGAAGTHLEPL*SQTIME
Trigger: CTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTG...AGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCACTTGGAGCCTCTGTaGTCCCAGACCATCATGGAG +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHHLEPL*SQTIME
Trigger: CTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTG...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp TGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACAACAGCACGGGCTTCTaGGAACACTCCTCTGACTTG +
Preference number: 4 (lower is better)
Translates to: WGTGLGSESPLGASVIPDNSTGF*EHSSDL
Trigger: CAAGTCAGAGGAGTGTTCTCAGAAGCCCGTGCTGTT...GTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp TCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGGAGGTCAGCAAAACTaGCCTGGGCGATGCCATAAG +
Preference number: 4 (lower is better)
Translates to: SPLGASVIPDHHGGAAGTGGQQN*PGRCHK
Trigger: CTTATGGCATCGCCCAGGTCAGTTTTGCTGACCTCC...AGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGGCAGCTTGAGATCCTaGAAGCTGCTTTCGGTGTCG +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAGSLRS*KLLSVS
Trigger: CGACACCGAAAGCAGCTTTCAGGATCTCAAGCTGCC...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp AGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGTCTGCTAGAATCCTGGTCTaGGTTCCAGCCCAGCATTCA +
Preference number: 4 (lower is better)
Translates to: SLLEGGFTLGWWRVRPQSARILV*VPAQHS
Trigger: TGAATGCTGGGCTGGAACTCAGACCAGGATTCTAGC...AGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp GAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGAGGCATGTAGCGACATaGTGCAGAGCGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: EQLVLKRVANILINLYGMRHVAT*CRAHCW
Trigger: CCAGCAGTGCGCTCTGCAGCATGTCGCTACATGCCT...CATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGGTGATATTAAAAGTCTaGTCCCACGACACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GQHPHQPVWHDGRAVAGQVILKV*SHDTQA
Trigger: AGCCTGGGTGTCGTGGGAGCAGACTTTTAATATCAC...CTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGAAGTTTCGGGCTCTaGTTGGTGAGAACCTTGCAA +
Preference number: 4 (lower is better)
Translates to: VANILINLYGMTAVLSRARSFGL*LVRTLQ
Trigger: TTGCAAGGTTCTCACCAAGCAGAGCCCGAAACTTCT...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGTGTCAGCGTGGGGTCTaGCTCTTCTTCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMCQRGV*LFFCQG
Trigger: CCCCTGGCAGAAGAAGAGGCAGACCCCACGCTGACA...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp GTCAGGGAGACATACACCAGAACAGAATTCCAGGCTGCGGGCTCACAGCCTCCAGGGCAGACCATTCTTTaGTCAGGGGACAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: VRETYTRTEFQAAGSQPPGQTIL*SGDSPV
Trigger: CACAGGACTGTCCCCTGAGCAAAGAATGGTCTGCCC...TGGAGGCTGTGAGCCCGCAGCCTGGAATTCTGTTCTGGTGTATGTCTCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGTCACTGGGGTGCAGTaGCCCAAGGAAGATGACGTT +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPVTGVQ*PKEDDV
Trigger: AACGTCATCTTCCTTGGGGCACTGCACCCCAGTGAC...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp TGTGGTCCTTGGGTGGTCTGGAGCTCTAAAATGCCTATTGTGGACACTCCCTTGAAGAACACCGCCTGCTaGAGCAGCAGCTCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: CGPWVVWSSKMPIVDTPLKNTAC*SSSSVG
Trigger: GCCCACGGAGCTGCTGCTGCAGCAGGCGGTGTTCTT...CAAGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGACCACCCAAGGACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp GGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCCCCCACCTGAGACCCTaGTCTTCCCTGTGGACCTCA +
Preference number: 4 (lower is better)
Translates to: GKVVVSCTDQSPRGACPSPHLRP*SSLWTS
Trigger: TGAGGTCCACAGGGAAGAGCAGGGTCTCAGGTGGGG...GCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp GAACCACCCTTTGGTGATGGCCTCGGGTCCCCTTTGTCCTCACCCTGCAAGGAGAGCTTGGCAAACCCTTaGCTGTTACCTGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: EPPFGDGLGSPLSSPCKESLANP*LLPVTG
Trigger: GCCTGTAACAGGTAACAGGCAAGGGTTTGCCAAGCT...CTCCTTGCAGGGTGAGGACAAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGCAGACTCCTGGGCCCTaGCCTTGGCCTTCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMQTPGP*PWPSGV
Trigger: AACACCTGAAGGCCAAGGCCAGGGCCCAGGAGTCTG...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATACTCCAGGAATACTTTaGCCACCATTGGAAATAGCA +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHTPGIL*PPLEIA
Trigger: TGCTATTTCCAATGGTGGCCAAAGTATTCCTGGAGT...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp AACTATGATAACCACCACAGCCACCACCACACCACAGGTTGGCTGAGTGGGTCAGGCATGACGGCCAGCTaGATGGAGAAAGCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NYDNHHSHHHTTGWLSGSGMTAS*MEKALC
Trigger: GCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCC...TGACCCACTCAGCCAACCTGTGGTGTGGTGGTGGCTGTGGTGGTTATCATAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp CTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGAACAGGGCAAGCAGTaGGTACCGGCAAGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: LGLCFPLYYEANSPEFPEEQGKQ*VPARSG
Trigger: GCCGCTCCTTGCCGGTACCCACTGCTTGCCCTGTTC...CTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGACAGGGAGGGACCATGTaGGGGACTGGTCTAGGTAGT +
Preference number: 4 (lower is better)
Translates to: LGSESPLGASVIPDHHGGQGGTM*GTGLGS
Trigger: ACTACCTAGACCAGTCCCCCACATGGTCCCTCCCTG...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTCATGGGGCTCCCCCTTaGTCTTGTGAACTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAHGAPP*SCELES
Trigger: AGACTCCAGTTCACAAGACCAAGGGGGAGCCCCATG...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCATTCCCTTAGGTCACTaGGGTGCAGTGCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGIPLGH*GAVPQG
Trigger: TCCTTGGGGCACTGCACCCCAGTGACCTAAGGGAAT...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGAGATTCAAGTACTTGTaGCCAAGGAGGAGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQHPHQPVWHDGRAVAGQRFKYL*PRRRSA
Trigger: TGCTGACCTCCTCCTTGGCCACAAGTACTTGAATCT...CTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGAGGTACTTCTCCTGGTaGGCGTGGATCTCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQRYFSW*AWISKV
Trigger: CACCTTAGAGATCCACGCCCACCAGGAGAAGTACCT...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTCTTTCTTGGCTCCTTaGCTATCTCTTGATACAGCT +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHSFLAP*LSLDTA
Trigger: AGCTGTATCAAGAGATAGCCAAGGAGCCAAGAAAGA...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GGCTGGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAGTTCAGCAGCTCCGTGGGCTaGAAGAGGTGCACGTGGTAC +
Preference number: 4 (lower is better)
Translates to: GWWRVRPQSYMPMENGKFSSSVG*KRCTWY
Trigger: GTACCACGTGCACCTCTTCCAGCCCACGGAGCTGCT...GAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp AGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGTCTCCCTGCTCTTCCCTGTaGACCTCATTCAGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SLLEGGFTLGWWRVRPQSPCSSL*TSFSSL
Trigger: CAAAGAGCTGAATGAGGTCCACAGGGAAGAGCAGGG...AGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp TGCAGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGAGGACTTGGAGGGACTaGTACAGCAAGACCTACGTT +
Preference number: 4 (lower is better)
Translates to: CSLLEGGFTLGWWRVRPQRTWRD*YSKTYV
Trigger: AACGTAGGTCTTGCTGTACCAGTCCCTCCAAGTCCT...CTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp AGTCCACGTGGTGCCTGTCCCAGCTCCACCTGTCTCGATCCAACACAGGCTCCAAAGAGGAAGAGGACTTaGAGGGACTGGTACAGCAAG +
Preference number: 4 (lower is better)
Translates to: SPRGACPSSTCLDPTQAPKRKRT*RDWYSK
Trigger: CTTGCTGTACCAGTCCCTCCAAGTCCTCTTCCTCTT...TGGAGCCTGTGTTGGATCGAGACAGGTGGAGCTGGGACAGGCACCACGTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp AGTTTCTGGCAAAACCAGACATACAACTGGCCTGCTGAGCTGACCCGTTCTCTGAAGAGACTCCAAGACTaGGAGGAGCGTCCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: SFWQNQTYNWPAELTRSLKRLQD*EERPPV
Trigger: CACCGGCGGACGCTCCTCTCAGTCTTGGAGTCTCTT...CAGAGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGACACAGGGAAGGCCAGTaGGATGGTGAATTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGSESPLGASVIPDHHGGHREGQ*DGEFAG
Trigger: CCCTGCAAATTCACCATCTCACTGGCCTTCCCTGTG...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCGCATATTTTCCCTTCTaGCCCATATTCACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: ANILINLYGMTAVLSRASAYFPF*PIFTGK
Trigger: CTTCCCTGTGAATATGGGTCAGAAGGGAAAATATGC...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp CGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGTGAGCCCAGCCCAGTCCAGAGCCTCAAGGTaGTTTTGTGGAAATTTATTT +
Preference number: 4 (lower is better)
Translates to: RSIRIGLRNHDHEVSPAQSRASR*FCGNLF
Trigger: AAATAAATTTCCACAAAATCACCTTGAGGCTCTGGA...CTGGGCTGGGCTCACCTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATAATGGGTACAGGCTGTaGTGGAAGGCAGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHNGYRL*WKAGST
Trigger: TGTGCTTCCTGCCTTCCATCACAGCCTGTACCCATT...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp TGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCTTTCGGTGTCGCTCTaGAGACCTGTCACTTGGAAT +
Preference number: 4 (lower is better)
Translates to: WGTGLGSESPLGASVIPDLSVSL*RPVTWN
Trigger: ATTCCAAGTGACAGGTCTTCAGAGCGACACCGAAAG...GTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGCGGAACAGCAGCTGTaGGTTGTACAGCACCTTGTA +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAAEQQL*VVQHLV
Trigger: TACAAGGTGCTGTACAACTCACAGCTGCTGTTCCGC...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp CCAGCTTGGCAAACCCTTGCCTGTTACCTGTTACAGGCTTTGGTGCGGGCGAAGGCGGAACAGCAGCTGTaGGTTGTACAGCACCTTGTA +
Preference number: 4 (lower is better)
Translates to: PAWQTLACYLLQALVRAKAEQQL*VVQHLV
Trigger: TACAAGGTGCTGTACAACTCACAGCTGCTGTTCCGC...CTTCGCCCGCACCAAAGCCTGTAACAGGTAACAGGCAAGGGTTTGCCAAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp TGCAGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGCAAAATGGATACCACTaGAGATGCAGAGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: CSLLEGGFTLGWWRVRPQQNGYH*RCRVAQ
Trigger: CTGTGCCACTCTGCATCTTCAGTGGTATCCATTTTG...CTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp GAACCACCCTTTGGTGATGGCCTCGGGTCCCCTTTGTCCTCACCCTGCAAGGAGGTGAACTTTAAGCTTTaGTGTGGTCCTTGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: EPPFGDGLGSPLSSPCKEVNFKL*CGPWVV
Trigger: GACCACCCAAGGACCACATCAAAGCTTAAAGTTCAC...CTCCTTGCAGGGTGAGGACAAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp TGCAGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGGCGTGCTCACTGTGGTaGACTTTAAGCTTTGATGTG +
Preference number: 4 (lower is better)
Translates to: CSLLEGGFTLGWWRVRPQACSLW*TLSFDV
Trigger: CACATCAAAGCTTAAAGTTCACCACAGTGAGCACGC...CTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp GACCCGTTCTCTGTCGATGACCATAGGCTATGTCATGGGTATAATGGAGCGGCCGATGGGCTCTATGCTTaGGGGGTCCTCTTCCCACTC +
Preference number: 4 (lower is better)
Translates to: DPFSVDDHRLCHGYNGAADGLYA*GVLFPL
Trigger: GAGTGGGAAGAGGACCCCGCAAGCATAGAGCCCATC...GGCCGCTCCATTATACCCATGACATAGCCTATGGTCATCGACAGAGAACGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp CAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCAGTGACCTGCATGTATACAGGAGATGGGCTCTATaGTTGCGGGGTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QASEPKLSHHIPSDLHVYRRWAL*LRGPLP
Trigger: GGGAAGAGGACCCCGCAAGCATAGAGCCCATCTCCT...GTATACATGCAGGTCACTGGGGATATGATGGCTTAGCTTGGGCTCAGAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp TGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGAGGACTCGATGCTGCTaGACGGGCGGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: WAFVSPCTMKPIPLSFLRRTRCC*TGGQSQ
Trigger: CTGACTCTGACCGCCCGTGCAGCAGCATCGAGTCCT...CCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATATGAGGACTCGATGCTaGTGCACGGGCGGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: TGLGSESPLGASVIPDHHMRTRC*CTGGQS
Trigger: ACTCTGACCGCCCGTGCAGCAGCATCGAGTCCTCAT...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp AGTTTCTGGCAAAACCAGACATACAACTGGCCTGCTGAGCTGACCCGTTCTCTGCAGATGAGGACTCGATaGTGCTGCACGGGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: SFWQNQTYNWPAELTRSLQMRTR*CCTGGQ
Trigger: CTGACCGCCCGTGCAGCAGCATCGAGTCCTCATCTG...CAGAGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCTGTCAGCGTGGGGTCTaGCTCTTCTTCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFCQRGV*LFFCQG
Trigger: CCCCTGGCAGAAGAAGAGGCAGACCCCACGCTGACA...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp CAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCAGTGACCTGCATGTATACATGGAGAAAGCGCTCTaGTTCCTGGGGCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QASEPKLSHHIPSDLHVYMEKAL*FLGPVS
Trigger: GCTGACAGGCCCCAGGAAGCAGAGCGCTTTCTCCAT...GTATACATGCAGGTCACTGGGGATATGATGGCTTAGCTTGGGCTCAGAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp AGGTCCCATGGTACGCTCCCCCAGGAGGATCATGGGTTCCTCCTTGGGACTGTACCAGGTGTGGTGGTGTaGACCTGTAGTCTTAGCTAT +
Preference number: 4 (lower is better)
Translates to: RSHGTLPQEDHGFLLGTVPGVVV*TCSLSY
Trigger: ATAGCTAAGACTACAGGTGCACACCACCACACCTGG...TACAGTCCCAAGGAGGAACCCATGATCCTCCTGGGGGAGCGTACCATGGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGGGGATTTAAATCCTaGTTTTGCTCCTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: VANILINLYGMTAVLSRARGFKS*FCSSVM
Trigger: CATGACCGAGGAGCAAAAGCAGGATTTAAATCCCCT...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCACGTCCCAGAGGGTGGTaGTGTTATAGCAGATGTCGT +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPRPRGW*CYSRCR
Trigger: ACGACATCTGCTATAACAGCACCACCCTCTGGGACG...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp CCTGTCCCAGCTCCACCTGTCTCGATCCAACACAGGCTCCAGTACATTAGCAAATCAAAGTCCACGTGGTaGCTGTCCCAGCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: PVPAPPVSIQHRLQYISKSKSTW*LSQLHL
Trigger: CAGGTGGAGCTGGGACAGGCACCACGTGGACTTTGA...TTTGCTAATGTACTGGAGCCTGTGTTGGATCGAGACAGGTGGAGCTGGGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp GGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCTGTTACAGGCTTTGGTaGGGGCGAAGGGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GKVVVSCTDQSPRGACPSCYRLW*GRREQL
Trigger: GAGCTGCTCCCTTCGCCCGCACCAAAGCCTGTAACA...GCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp GGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCGGAGCAGACACACAGTaGAGGCCACAATCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GKVVVSCTDQSPRGACPSGADTQ*RPQSLG
Trigger: CCCAAGGGATTGTGGCCTGCACTGTGTGTCTGCTCC...GCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GTCAGGGAGACATACACCAGAACAGAATTCCAGGCTGCGGGCTCACAGCCTCCACCTGGCGGATGTTCCTaGTTCGACTCTTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: VRETYTRTEFQAAGSQPPPGGCS*FDSSLT
Trigger: TGTCAGAGAAGAGTCGAACCAGGAACATCCGCCAGG...TGGAGGCTGTGAGCCCGCAGCCTGGAATTCTGTTCTGGTGTATGTCTCCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCCTGGCGGATGTTCCTaGTTCGACTCTTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHPGGCS*FDSSLT
Trigger: TGTCAGAGAAGAGTCGAACCAGGAACATCCGCCAGG...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGTGGGGCCTGTCAGCGTaGGGTCTGCCTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWWGLSA*GLPLLL
Trigger: CAGAAGAAGAGGCAGACCCCACGCTGACAGGCCCCA...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCGGCATGACGGCCAGCTaGATGGAGAAAGCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFGMTAS*MEKALC
Trigger: GCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCC...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp ACAGCTCCTGGGGGTAGCCCTCATGCTCCCGCAGGATCCTCTTTAACAAAGCTGGAGGATGAAATGAGGTaGCACGCAGCAGGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TAPGGSPHAPAGSSLTKLEDEMR*HAAGLS
Trigger: TGACAACCCTGCTGCGTGCCACCTCATTTCATCCTC...CAGCTTTGTTAAAGAGGATCCTGCGGGAGCATGAGGGCTACCCCCAGGAGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp GAGCTGACCCGTTCTCTGTCGATGACCATAGGCTATGTCATGGGTATAATGGAGGGTCAGGCTGGAGCGTaGGGTGGGGTAAGACCCTCT +
Preference number: 4 (lower is better)
Translates to: ELTRSLSMTIGYVMGIMEGQAGA*GGVRPS
Trigger: AGAGGGTCTTACCCCACCCCACGCTCCAGCCTGACC...CTCCATTATACCCATGACATAGCCTATGGTCATCGACAGAGAACGGGTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp AAACAAGTCCCGGGCCAGGTGTGCACAGCCATCTGCACAGGCTGTGAACAGAGGCTGGCTTCATTCTGCTaGAAACAGTCATGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KQVPGQVCTAICTGCEQRLASFC*KQSCQA
Trigger: TGCCTGGCATGACTGTTTCCAGCAGAATGAAGCCAG...CCTCTGTTCACAGCCTGTGCAGATGGCTGTGCACACCTGGCCCGGGACTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp CACAGCCTCCACACTGCTGACAGTTGGGGCAGACCATTCTTTGCTCAGGGGACAGAGGGGACCATGTCCTaGCTTCATTCTGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: HSLHTADSWGRPFFAQGTEGTMS*LHSAGN
Trigger: GTTTCCAGCAGAATGAAGCCAGGACATGGTCCCCTC...TGTCCCCTGAGCAAAGAATGGTCTGCCCCAACTGTCAGCAGTGTGGAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp GAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGAACATGAATGTGCACTaGGTGCTGGGCTCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: EQLVLKRVANILINLYGMNMNVH*VLGSGH
Trigger: ATGCCCCGAGCCCAGCACCCAGTGCACATTCATGTT...CATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR CCA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGGATGCGTTTGCTATTTaGGGAGAGGCAAACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWDAFAI*GEANQA
Trigger: GGCCTGGTTTGCCTCTCCCCAAATAGCAAACGCATC...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR CCA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGATTCTCCTGGTGGGCGTaGATCTCTAAGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGSESPLGASVIPDHHGGFSWWA*ISKVRV
Trigger: CACCCTCACCTTAGAGATCCACGCCCACCAGGAGAA...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTAGGTACTTCTCCTGGTaGGCGTGGATCTCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRARYFSW*AWISKV
Trigger: CACCTTAGAGATCCACGCCCACCAGGAGAAGTACCT...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp AGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTCTTCTCCTGTGTTCTGACCTaGGAATCCAGCTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SHSSNCGPGTCPQRAGLFSCVLT*ESSFGG
Trigger: ACCACCAAAGCTGGATTCCCAGGTCAGAACACAGGA...GAAGAGACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATTGGAAGAGGTGCACGTaGTACAGGATGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TGLGSESPLGASVIPDHHWKRCT*YRMASR
Trigger: CCTGGAGGCCATCCTGTACCACGTGCACCTCTTCCA...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGACCCTCAGGAGGCCCAGCTTaGCAAACCCTTGCCTGTTAC +
Preference number: 4 (lower is better)
Translates to: GCLEFLCTGEVWGGAVRPSGGPA*QTLACY
Trigger: GTAACAGGCAAGGGTTTGCCAAGCTGGGCCTCCTGA...GGGTCTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGACCCCCCCCAGCTCTTGGCTaGACACCTAGAGATCAGTCA +
Preference number: 4 (lower is better)
Translates to: GCLEFLCTGEVWGGAVRPPPALG*TPRDQS
Trigger: TGACTGATCTCTAGGTGTCCAGCCAAGAGCTGGGGG...GGGTCTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCC
56% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp TTGAGAGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCGATGTGGTCCTTGGGTaGTCTGGAGCTCTAAAATGC +
Preference number: 4 (lower is better)
Translates to: LRATAVTVGLGHAHREQVDVVLG*SGALKC
Trigger: GCATTTTAGAGCTCCAGACCACCCAAGGACCACATC...GACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCTCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CAA 72 bp GTAGTCTTAGCTATGCGGGTGGCAGAGGCGGGAGGCTaGCTTCAGGCTGGAGTGAGCTATGATCATGTCACT +
Preference number: 4 (lower is better)
Translates to: VVLAMRVAEAGG*LQAGVSYDHVT
Trigger: AGTGACATGATCATAGCTCACTCCAGCCTGAAGCAAGCCTCCCGCCTCTGCCACCCGCATAGCTAAGACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp AACTATGATAACCACCACAGCCACCACCACACCACAGGTTGGCTGAGTGGGTCACTCCCACGTCGTCTGTaGAGCCGGCAGTCTTTAATC +
Preference number: 4 (lower is better)
Translates to: NYDNHHSHHHTTGWLSGSLPRRL*SRQSLI
Trigger: GATTAAAGACTGCCGGCTTCACAGACGACGTGGGAG...TGACCCACTCAGCCAACCTGTGGTGTGGTGGTGGCTGTGGTGGTTATCATAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGCTCCCACGTCGTCTGTaGAGCCGGCAGTCTTTAATC +
Preference number: 4 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMLPRRL*SRQSLI
Trigger: GATTAAAGACTGCCGGCTTCACAGACGACGTGGGAG...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGTCGGGCTCTGCTTGGTaGGAACCTTGCAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWSGSAW*EPCKDF
Trigger: AAAGTCTTTGCAAGGTTCTCACCAAGCAGAGCCCGA...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCCGGCAAGGAGCGGCATaGCGGCCAGCTGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: NQTELGSSPGFTFPSCVIRQGAA*RPAGWR
Trigger: TCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCG...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGGCTGTGAGGATGAAATaGGGTGGCACGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWAVRMK*GGTQQG
Trigger: ACCCTGCTGCGTGCCACCTCATTTCATCCTCACAGC...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp CCCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTGCTGTGAGGATGAAATaGGGTGGCACGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PSLGLCFPLYYEANSPEFAVRMK*GGTQQG
Trigger: ACCCTGCTGCGTGCCACCTCATTTCATCCTCACAGC...AAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp CAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCAGTGACCTGCATGTATACTCACTGTCAGGCCTCTaGGCCCAAGCTAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: QASEPKLSHHIPSDLHVYSLSGL*AQAKPS
Trigger: TGATGGCTTAGCTTGGGCTCAGAGGCCTGACAGTGA...GTATACATGCAGGTCACTGGGGATATGATGGCTTAGCTTGGGCTCAGAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp ATTGACACCAACCCAAGAGCGCGAGAGGAGGATGACGACTGGCACCTGTGGAACCTGAAGTCGGGAGTTTaGGACCAGCCTGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: IDTNPRAREEDDDWHLWNLKSGV*DQPDQN
Trigger: ATTTTGGTCAGGCTGGTCTCAAACTCCCGACTTCAG...GTTCCACAGGTGCCAGTCGTCATCCTCCTCTCGCGCTCTTGGGTTGGTGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp GGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCCGTGGATCTCTAAGGTaGGGGTGGAGTTCCGACTGT +
Preference number: 4 (lower is better)
Translates to: GKVVVSCTDQSPRGACPSRGSLR*GWSSDC
Trigger: ACAGTCGGAACTCCACCCTCACCTTAGAGATCCACG...GCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp CCAGCTTGGCAAACCCTTGCCTGTTACCTGTTACAGGCTTTGGTGCGGGCGAAGCTTTCGGTGTCGCTCTaGAGACCTGTCACTTGGAAT +
Preference number: 4 (lower is better)
Translates to: PAWQTLACYLLQALVRAKLSVSL*RPVTWN
Trigger: ATTCCAAGTGACAGGTCTTCAGAGCGACACCGAAAG...CTTCGCCCGCACCAAAGCCTGTAACAGGTAACAGGCAAGGGTTTGCCAAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp AGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGTCTACTTCCATGGAGCTGTaGTCAGTTGTCCTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SLLEGGFTLGWWRVRPQSTSMEL*SVVLRS
Trigger: ACTCCTAAGGACAACTGATCACAGCTCCATGGAAGT...AGACTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp CGAGAAAGTGAAGGTGATCAGGAAGGACAAGCTGTAGGTGAAGTATCATTTTCATGCTGCAGAGCGCACTaGTGGCCGCCGGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RESEGDQEGQAVGEVSFSCCRAH*WPPALL
Trigger: CAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCA...TGAAAATGATACTTCACCTACAGCTTGTCCTTCCTGATCACCTTCACTTTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATGCTTTGTCACCTTCGTaGCACGGCTTCACAGTCTTT +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHALSPS*HGFTVF
Trigger: AAAGACTGTGAAGCCGTGGCACGAAGGTGACAAAGC...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGTGTTGGTATTCTCAATaGCCTGTTCAGATAATTTTC +
Preference number: 4 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLCWYSQ*PVQIIF
Trigger: GAAAATTATCTGAACAGGGCATTGAGAATACCAACA...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp AGGTCCCATGGTACGCTCCCCCAGGAGGATCATGGGTTCCTCCTTGGGACTGTAAGAAGTTTCGGGCTCTaGTTGGTGAGAACCTTGCAA +
Preference number: 4 (lower is better)
Translates to: RSHGTLPQEDHGFLLGTVRSFGL*LVRTLQ
Trigger: TTGCAAGGTTCTCACCAAGCAGAGCCCGAAACTTCT...TACAGTCCCAAGGAGGAACCCATGATCCTCCTGGGGGAGCGTACCATGGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp CTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGATGGAGAAAGCGCTCTaGTTCCTGGGGCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LGLCFPLYYEANSPEFPEMEKAL*FLGPVS
Trigger: GCTGACAGGCCCCAGGAAGCAGAGCGCTTTCTCCAT...CTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp ATTAGTTTCTGGCAAAACCAGACATACAACTGGCCTGCTGAGCTGACCCGTTCTGTGTCACACGGGAAGTaGCTGCACCCAGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ISFWQNQTYNWPAELTRSVSHGK*LHPEGL
Trigger: GAGCCCCTCTGGGTGCAGGCACTTCCCGTGTGACAC...AGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCTGGCAGACTTCTCACTaGCACGACTCACGACAGTTT +
Preference number: 4 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGWQTSH*HDSRQF
Trigger: AAACTGTCGTGAGTCGTGGCAGTGAGAAGTCTGCCA...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp CCAGCTCTTGGCTGGACACCTAGAGATCAGTCATGGGTAATAGTGTTGAAGCTCCCCCATAGAGCCGGCTaGGGAACAGCAGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: PALGWTPRDQSWVIVLKLPHRAG*GTAAVS
Trigger: ACTCACAGCTGCTGTTCCGCAGCCGGCTCTATGGGG...GAGCTTCAACACTATTACCCATGACTGATCTCTAGGTGTCCAGCCAAGAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp AGAAGGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGCCTTTGTCCTCACCCTaGAAGGAGGGCCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: RRLLRVSLHRRSLGRGCQPLSSP*KEGPEC
Trigger: GCATTCTGGGCCCTCCTTGCAGGGTGAGGACAAAGG...CTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCTCCTGCCAAAGAAATaGTTGGTGTTCTTGAAACAC +
Preference number: 4 (lower is better)
Translates to: ANILINLYGMTAVLSRASLLPKK*LVFLKH
Trigger: GTGTTTCAAGAACACCAACCATTTCTTTGGCAGGAG...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp GTCAGGGAGACATACACCAGAACAGAATTCCAGGCTGCGGGCTCACAGCCTCCATCATGGGTTCCTCCTTaGGACTGTAGGACGAAGGAA +
Preference number: 4 (lower is better)
Translates to: VRETYTRTEFQAAGSQPPSWVPP*DCRTKE
Trigger: TTCCTTCGTCCTACAGTCCCAAGGAGGAACCCATGA...TGGAGGCTGTGAGCCCGCAGCCTGGAATTCTGTTCTGGTGTATGTCTCCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp CTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGCCCCCAGGAGGATCATaGGTTCCTCCTTGGGACTGT +
Preference number: 4 (lower is better)
Translates to: LGLCFPLYYEANSPEFPEPPGGS*VPPWDC
Trigger: ACAGTCCCAAGGAGGAACCCATGATCCTCCTGGGGG...CTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp ACAGCTCCTGGGGGTAGCCCTCATGCTCCCGCAGGATCCTCTTTAACAAAGCTGCACACTGCTGACAGTTaGGGCAGACCATTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: TAPGGSPHAPAGSSLTKLHTADS*GRPFFA
Trigger: AGCAAAGAATGGTCTGCCCCAACTGTCAGCAGTGTG...CAGCTTTGTTAAAGAGGATCCTGCGGGAGCATGAGGGCTACCCCCAGGAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATCCTCATCAACCTGTATaGCATGACGGCCGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TGLGSESPLGASVIPDHHPHQPV*HDGRAV
Trigger: GACAGCACGGCCGTCATGCCATACAGGTTGATGAGG...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTTCACGTCCCAGAGGGTaGTGCTGTTATAGCAGATGT +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRASRPRG*CCYSRC
Trigger: ACATCTGCTATAACAGCACCACCCTCTGGGACGTGA...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTAGCTGCCTCAAGCCTTaGTCGGCCAGGCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFSCLKP*SARPSR
Trigger: CCTGGAAGGCCTGGCCGACCAAGGCTTGAGGCAGCT...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCCTGGGAATCCAGCTTTaGTGGTTCTCCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GKVVVSCTDQSPRGACPSLGIQL*WFSHSC
Trigger: GCAGCTGTGGGAGAACCACCAAAGCTGGATTCCCAG...GCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp TCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTTCCTGTGTTCTGACCTaGGAATCCAGCTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SPLGASVIPDHHGGAAGTSCVLT*ESSFGG
Trigger: ACCACCAAAGCTGGATTCCCAGGTCAGAACACAGGA...AGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGCCTGACCTAGTTTTCTaGGAGAAGTTTCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQPDLVF*EKFLWQ
Trigger: CTGCCAGAGAAACTTCTCCCAGAAAACTAGGTCAGG...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GAACCACCCTTTGGTGATGGCCTCGGGTCCCCTTTGTCCTCACCCTGCAAGGAGTTCTTAAACATGTTGTaGGAAGAGGAGACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: EPPFGDGLGSPLSSPCKEFLNML*EEETPA
Trigger: TGCTGGGGTCTCCTCTTCCCACAACATGTTTAAGAA...CTCCTTGCAGGGTGAGGACAAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGGGTCCTTGGGTGGTCTaGAGCTCTAAAATGCCTATT +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQGPWVV*SSKMPI
Trigger: AATAGGCATTTTAGAGCTCCAGACCACCCAAGGACC...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CAA 72 bp GCCTCCACACTGCTGACAGTTGGGGCAGACCATTCTTaGCTCAGGGGACAGTCCTGTGCATTATGGCATGTT +
Preference number: 4 (lower is better)
Translates to: ASTLLTVGADHS*LRGQSCALWHV
Trigger: AACATGCCATAATGCACAGGACTGTCCCCTGAGCAAAGAATGGTCTGCCCCAACTGTCAGCAGTGTGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCAGCTGGCAGGCTCAGATaGGGACTCGATGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QTELGSSPGFTFPSCVISAGRLR*GLDAAA
Trigger: TGCAGCAGCATCGAGTCCTCATCTGAGCCTGCCAGC...TGAGATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCACAGGGAAGGCCAGTaGGATGGTGAATTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFHREGQ*DGEFAG
Trigger: CCCTGCAAATTCACCATCTCACTGGCCTTCCCTGTG...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTCACAGTCTTTACTCCTaGCTCCAGGAATACTTTGGC +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAHSLYS*LQEYFG
Trigger: GCCAAAGTATTCCTGGAGTCAGGAGTAAAGACTGTG...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAAGAATCGTCCATTTTaGGGGACTTCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: VANILINLYGMTAVLSRAKNRPF*GTSHIP
Trigger: AGGAATATGAGAAGTCCCTCAAAATGGACGATTCTT...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GTGGCAGAGGCGGGAGGCTTGCTTCAGGCTGGAGTGAGCTATGATCATGTCACTTGCTTCAGGCTGGAGTaGGCTATGATCATGTCACTT +
Preference number: 4 (lower is better)
Translates to: VAEAGGLLQAGVSYDHVTCFRLE*AMIMSL
Trigger: AAGTGACATGATCATAGCTCACTCCAGCCTGAAGCA...AGTGACATGATCATAGCTCACTCCAGCCTGAAGCAAGCCTCCCGCCTCTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp ATTGACACCAACCCAAGAGCGCGAGAGGAGGATGACGACTGGCACCTGTGGAACAGAACTCTGAGAGGCTaGAGCAGGAGGATTACTTGT +
Preference number: 4 (lower is better)
Translates to: IDTNPRAREEDDDWHLWNRTLRG*SRRITC
Trigger: ACAAGTAATCCTCCTGCTTCAGCCTCTCAGAGTTCT...GTTCCACAGGTGCCAGTCGTCATCCTCCTCTCGCGCTCTTGGGTTGGTGTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp GTCAGGGAGACATACACCAGAACAGAATTCCAGGCTGCGGGCTCACAGCCTCCACCTCTCAAGAGGTTCTaGTGCTACGAGAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: VRETYTRTEFQAAGSQPPPLKRF*CYEKVK
Trigger: CTTCACTTTCTCGTAGCATCAGAACCTCTTGAGAGG...TGGAGGCTGTGAGCCCGCAGCCTGGAATTCTGTTCTGGTGTATGTCTCCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp GTGGCAGAGGCGGGAGGCTTGCTTCAGGCTGGAGTGAGCTATGATCATGTCACTTGGGGTAAGACCCTCTaGAAGTTTACTCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VAEAGGLLQAGVSYDHVTWGKTL*KFTLCH
Trigger: GTGACAGAGAGTAAACTTTCAGAGGGTCTTACCCCA...AGTGACATGATCATAGCTCACTCCAGCCTGAAGCAAGCCTCCCGCCTCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp TGGTTAAGAGTGGAATGGTGTAAGGGAATGTTTGTGCTCCTCCAACAGCCAGTCTGCAGGAGAATCGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: WLRVEWCKGMFVLLQQPVCRRIA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCA...GACTGGCTGTTGGAGGAGCACAAACATTCCCTTACACCATTCCACTCTTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGGCAGGAAGCACACTTaGTCTTTATGGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: LGSESPLGASVIPDHHGGGRKHT*SLWSGD
Trigger: ATCCCCTGACCATAAAGATCAAGTGTGCTTCCTGCC...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGAATCCTGTGAGTACGTaGATCTCTTTCTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQNPVST*ISFLAP
Trigger: AGGAGCCAAGAAAGAGATTCACGTACTCACAGGATT...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGTCCCTTTCTTCTTCCTaGCTGTTACAGGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWSLSSS*LLQALV
Trigger: CACCAAAGCCTGTAACAGTCAGGAAGAAGAAAGGGA...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTATTTCCTGTGTTCTaGCCTGGGAATCCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAVFPVF*PGNPAL
Trigger: CAAAGCTGGATTCCCAGGTCAGAACACAGGAAATAC...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGACCCTTCATCCATCTGGGTTaGAAAGGCCTAGCGACCAGT +
Preference number: 4 (lower is better)
Translates to: GCLEFLCTGEVWGGAVRPFIHLG*KGLATS
Trigger: ACTGGTCGCTAGGCCTTTTCAACCCAGATGGATGAA...GGGTCTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp GGCTGGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAGTTCCTCTTGAGGAGAGGATaGATGGTATCTCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GWWRVRPQSYMPMENGKFLLRRG*MVSPGQ
Trigger: CTGGCCTGGAGATACCATTCATCCTCTCCTCAAGAG...GAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGACTGGCTTCTACTCTTaGGGAGAGGATGAATGGTAT +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQTGFYS*GEDEWY
Trigger: ATACCATTCATCCTCTCCTCAAGAGTAGAAGCCAGT...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp CCAGCTCTTGGCTGGACACCTAGAGATCAGTCATGGGTAATAGTGTTGAAGCTCAGAACCACCCTTTGGTaGTGGCCTCGGGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PALGWTPRDQSWVIVLKLRTTLW*WPRVPF
Trigger: AAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTCT...GAGCTTCAACACTATTACCCATGACTGATCTCTAGGTGTCCAGCCAAGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp TGTGGTCCTTGGGTGGTCTGGAGCTCTAAAATGCCTATTGTGGACACTCCCTTGGTGACAGCAGGACCCTaGGAACCACCCTTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: CGPWVVWSSKMPIVDTPLVTAGP*EPPFGD
Trigger: ATCACCAAAGGGTGGTTCTCAGGGTCCTGCTGTCAC...CAAGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGACCACCCAAGGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp CTTCCCCACTTTATAGCCAAGAAACCAGACCCAGGGCATGAAGGGATTTGCCTCCCAGCCTTTAATGGGTaGCAGCAGGACCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LPHFIAKKPDPGHEGICLPAFNG*QQDPEN
Trigger: GTTCTCAGGGTCCTGCTGTCACCCATTAAAGGCTGG...GAGGCAAATCCCTTCATGCCCTGGGTCTGGTTTCTTGGCTATAAAGTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGTTGGTATTCTCAATaGCCTGTTCAGATAATTTTC +
Preference number: 4 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHCWYSQ*PVQIIF
Trigger: GAAAATTATCTGAACAGGGCATTGAGAATACCAACA...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAAGAAGTTTCGGGCTCTaGTTGGTGAGAACCTTGCAA +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPRSFGL*LVRTLQ
Trigger: TTGCAAGGTTCTCACCAAGCAGAGCCCGAAACTTCT...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp AGGTCCCATGGTACGCTCCCCCAGGAGGATCATGGGTTCCTCCTTGGGACTGTAAGCCAGTCCCAAACATaGGCTAATGTCATTTCATCC +
Preference number: 4 (lower is better)
Translates to: RSHGTLPQEDHGFLLGTVSQSQT*ANVISS
Trigger: GGATGAAATGACATTAGCGCATGTTTGGGACTGGCT...TACAGTCCCAAGGAGGAACCCATGATCCTCCTGGGGGAGCGTACCATGGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGGTGTGCACAGCCATCTaGACAGGCTGTGAACAGAGG +
Preference number: 4 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWVCTAI*TGCEQR
Trigger: CCTCTGTTCACAGCCTGTGCAGATGGCTGTGCACAC...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTCGCCTAAGCACAAGATaGGTTTGCTATTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRARLSTR*VCYLGR
Trigger: TCTCCCCAAATAGCAAACGCATCTTGTGCTTAGGCG...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR GCA 90 bp GGCTGGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAGTTCCGTCCCAGAGGGTGGTaGTGTTATAGCAGATGTCGT +
Preference number: 4 (lower is better)
Translates to: GWWRVRPQSYMPMENGKFRPRGW*CYSRCR
Trigger: ACGACATCTGCTATAACAGCACCACCCTCTGGGACG...GAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp CCAGCTCTTGGCTGGACACCTAGAGATCAGTCATGGGTAATAGTGTTGAAGCTCATGGCACTCCGCCACTaGAGGTACTTCTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PALGWTPRDQSWVIVLKLMALRH*RYFSWW
Trigger: CCACCAGGAGAAGTACCTGCAGTGGCGGAGTGCCAT...GAGCTTCAACACTATTACCCATGACTGATCTCTAGGTGTCCAGCCAAGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp AGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTCTTCGCACAAAATGAAGCATaGATACCTCTGGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SHSSNCGPGTCPQRAGLFAQNEA*IPLDRR
Trigger: CCTTCTGTCCAGAGGTATGCATGCTTCATTTTGTGC...GAAGAGACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCGAACAGGGCAAGCAGTaGGTACCGGCAAGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: NQTELGSSPGFTFPSCVIEQGKQ*VPARSG
Trigger: GCCGCTCCTTGCCGGTACCCACTGCTTGCCCTGTTC...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCGCTTATGGCCGTTCTaGCCACAAGACAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFRLWPF*PQDKQE
Trigger: CTCCTGCTTGTCTTGTGGCCAGAACGGCCATAAGCG...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCAGGAGCATCCGCTTATaGCCGTTCTGGCCACAAGAC +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFRSIRL*PFWPQD
Trigger: GTCTTGTGGCCAGAACGGCCATAAGCGGATGCTCCT...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp AGTTTCTGGCAAAACCAGACATACAACTGGCCTGCTGAGCTGACCCGTTCTCTGGGTAGCTACCCTCTCTaGGCCTTTGTTTCCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SFWQNQTYNWPAELTRSLGSYPL*AFVSPC
Trigger: ACAGGGGGAAACAAAGGCCCAGAGAGGGTAGCTACC...CAGAGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp TGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACTCTCTAGTTCCTGAATaGGTACAGGCTGTGATGGAA +
Preference number: 4 (lower is better)
Translates to: WGTGLGSESPLGASVIPDSLVPE*VQAVME
Trigger: TTCCATCACAGCCTGTACCCATTCAGGAACTAGAGA...GTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp CAGGCCACAATCCCTTGGGGTTATGAGCCCTTAGTTTTTATCCTTCTCAGGAGAATCCTGGCTAGAGCCTaGAAGACCCGCCTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: QATIPWGYEPLVFILLRRILARA*KTRLRS
Trigger: TGAGCGGAGGCGGGTCTTCCAGGCTCTAGCCAGGAT...TCTCCTGAGAAGGATAAAAACTAAGGGCTCATAACCCCAAGGGATTGTGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp AGTCCACGTGGTGCCTGTCCCAGCTCCACCTGTCTCGATCCAACACAGGCTCCATCTTTCTTGGCTCCTTaGCTATCTCTTGATACAGCT +
Preference number: 4 (lower is better)
Translates to: SPRGACPSSTCLDPTQAPSFLAP*LSLDTA
Trigger: AGCTGTATCAAGAGATAGCCAAGGAGCCAAGAAAGA...TGGAGCCTGTGTTGGATCGAGACAGGTGGAGCTGGGACAGGCACCACGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp AGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTCTTCCGTGAATCTCTTTCTTaGCTCCTTGGCTATCTCTTG +
Preference number: 4 (lower is better)
Translates to: SHSSNCGPGTCPQRAGLFRESLS*LLGYLL
Trigger: CAAGAGATAGCCAAGGAGCCAAGAAAGAGATTCACG...GAAGAGACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTCAGCTCTTTGATGGGTaGCAGCTTGAGATCCTGAAA +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAQLFDG*QLEILK
Trigger: TTTCAGGATCTCAAGCTGCCACCCATCAAAGAGCTG...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp CCAGCTCTTGGCTGGACACCTAGAGATCAGTCATGGGTAATAGTGTTGAAGCTCGCACGTGGTACAGGATaGCCTCCAGGTCCCCATAGA +
Preference number: 4 (lower is better)
Translates to: PALGWTPRDQSWVIVLKLARGTG*PPGPHR
Trigger: TCTATGGGGACCTGGAGGCCATCCTGTACCACGTGC...GAGCTTCAACACTATTACCCATGACTGATCTCTAGGTGTCCAGCCAAGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGTTGTTAGCACTTCCATaGAGCTGTGATCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQLLALP*SCDQLS
Trigger: GGACAACTGATCACAGCTCCATGGAAGTGCTAACAA...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp AGAAGGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGAGGAGACTGGGAACTTaGAGAGCTGAGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RRLLRVSLHRRSLGRGCQRRLGT*RAELAE
Trigger: CTCAGCCAGCTCAGCTCTCCAAGTTCCCAGTCTCCT...CTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGGGTCTGAGAAGTAAGTaGTGTGTCACACGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMGLRSK*CVTREV
Trigger: CACTTCCCGTGTGACACATCACTTACTTCTCAGACC...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp AAACAAGTCCCGGGCCAGGTGTGCACAGCCATCTGCACAGGCTGTGAACAGAGGAGCACTTTCTCAAACTaGATTGACACCAACCCAAGA +
Preference number: 4 (lower is better)
Translates to: KQVPGQVCTAICTGCEQRSTFSN*IDTNPR
Trigger: TCTTGGGTTGGTGTCAATTCAGTTTGAGAAAGTGCT...CCTCTGTTCACAGCCTGTGCAGATGGCTGTGCACACCTGGCCCGGGACTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp GACCCGTTCTCTGTCGATGACCATAGGCTATGTCATGGGTATAATGGAGCGGCCTTTTGGAGGCAGGATTaGCCTGGGTTTGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: DPFSVDDHRLCHGYNGAAFWRQD*PGFESQ
Trigger: CTGGGATTCAAACCCAGGTCAATCCTGCCTCCAAAA...GGCCGCTCCATTATACCCATGACATAGCCTATGGTCATCGACAGAGAACGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGACTTGTTGGCAGGGGCTaGAATTTTAATCACCTTCGC +
Preference number: 4 (lower is better)
Translates to: LGSESPLGASVIPDHHGGLVGRG*NFNHLR
Trigger: GCGAAGGTGATTAAAATTTCAGCCCCTGCCAACAAG...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GAACCACCCTTTGGTGATGGCCTCGGGTCCCCTTTGTCCTCACCCTGCAAGGAGGGCAAATGGAGAAAGTaGCATTTCAGCAAACTTGTT +
Preference number: 4 (lower is better)
Translates to: EPPFGDGLGSPLSSPCKEGKWRK*HFSKLV
Trigger: AACAAGTTTGCTGAAATGTCACTTTCTCCATTTGCC...CTCCTTGCAGGGTGAGGACAAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp CAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCAAGGCATGTAGCGACATaGTGCAGAGCGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: QTELGSSPGFTFPSCVISRHVAT*CRAHCW
Trigger: CCAGCAGTGCGCTCTGCAGCATGTCGCTACATGCCT...TGAGATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp TGGTTAAGAGTGGAATGGTGTAAGGGAATGTTTGTGCTCCTCCAACAGCCAGTCATGAGGACTCGATGCTaGTGCACGGGCGGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: WLRVEWCKGMFVLLQQPVMRTRC*CTGGQS
Trigger: ACTCTGACCGCCCGTGCAGCAGCATCGAGTCCTCAT...GACTGGCTGTTGGAGGAGCACAAACATTCCCTTACACCATTCCACTCTTAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCACATCATGCTTGCTCCTaGCAAAGAAATGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPHHACS*QRNGWC
Trigger: ACACCAACCATTTCTTTGGCAGGAGCAAGCATGATG...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTCATCATGCTTGCTCCTaGCAAAGAAATGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAHHACS*QRNGWC
Trigger: ACACCAACCATTTCTTTGGCAGGAGCAAGCATGATG...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGGATCTCCATCATGCTTaGTCCTGCCAAAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWDLHHA*SCQRNG
Trigger: ACCATTTCTTTGGCAGGAGCAAGCATGATGGAGATC...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATGATCTCCATCATGCTTaGTCCTGCCAAAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHDLHHA*SCQRNG
Trigger: ACCATTTCTTTGGCAGGAGCAAGCATGATGGAGATC...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp ATCCCTGTTTGGCCACTGAGCTGTGTGGGATTAGGAAAGTTACTTAACCTCTTTCACACGGGAAGTGCCTaGACCCAGAGGGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: IPVWPLSCVGLGKLLNLFHTGSA*TQRGSV
Trigger: GACTGAGCCCCTCTGGGTGCAGGCACTTCCCGTGTG...AAAGAGGTTAAGTAACTTTCCTAATCCCACACAGCTCAGTGGCCAAACAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATAGCACAAGATGCGTTTaGTATTTGGGGAGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHSTRCV*YLGRGK
Trigger: TTTGCCTCTCCCCAAATAGCAAACGCATCTTGTGCT...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR GCA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGTGCTGCCATCTGTCCTaGTGCACTTTAATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWCCHLS*CTLMKL
Trigger: CAACTTCATTAAAGTGCAGCAGGACAGATGGCAGCA...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATTGCAGTACACAGGCATaGACAGCCTCTCTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TGLGSESPLGASVIPDHHCSTQA*TASLVP
Trigger: AGGAACTAGAGAGGCTGTGCATGCCTGTGTACTGCA...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp GAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGTCTGTGAGTTCTTCTTaGGAAAGGGGCATCCCAAAC +
Preference number: 4 (lower is better)
Translates to: EQLVLKRVANILINLYGMSVSSS*ERGIPN
Trigger: GTTTGGGATGCCCCTTTCGCAAGAAGAACTCACAGA...CATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR GCA 90 bp ATGAAGCATGCATACCTCTGGACAGAAGGCTGCTTAGAGTTTCTTTGCACAGGATGGTTCTCCCACAGCTaGCTCAAGCCTTGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: MKHAYLWTEGCLEFLCTGWFSHS*LKPWSA
Trigger: GGCCGACCAAGGCTTGAGGCAGCTGTGGGAGAACCA...TCCTGTGCAAAGAAACTCTAAGCAGCCTTCTGTCCAGAGGTATGCATGCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp CCTGTCCCAGCTCCACCTGTCTCGATCCAACACAGGCTCCAGTACATTAGCAAACTCCAGCCTCCCTTCTaGTGGCACTTGAAAGATTAC +
Preference number: 4 (lower is better)
Translates to: PVPAPPVSIQHRLQYISKLQPPF*WHLKDY
Trigger: GTAATCTTTCAAGTGCCAGCAGAAGGGAGGCTGGAG...TTTGCTAATGTACTGGAGCCTGTGTTGGATCGAGACAGGTGGAGCTGGGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCCTGGCGGATGTTCCTaGTTCGACTCTTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFPGGCS*FDSSLT
Trigger: TGTCAGAGAAGAGTCGAACCAGGAACATCCGCCAGG...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCATTCCTCACTGTTCTTaGAAGAAGTTTCGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGIPHCS*KKFRAL
Trigger: CAGAGCCCGAAACTTCTTCCAAGAACAGTGAGGAAT...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp TGCCTGCACCCAGGTGAAATAAACAGCCTTGTTACTTACACAAAGCCTGTTTGGTGGGGCCTGTCAGCGTaGGGTCTGCCTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CLHPGEINSLVTYTKPVWWGLSA*GLPLLL
Trigger: CAGAAGAAGAGGCAGACCCCACGCTGACAGGCCCCA...CCAAACAGGCTTTGTGTAAGTAACAAGGCTGTTTATTTCACCTGGGTGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp TGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGGAGGATGAAATGAGGTaGCACGCAGCAGGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: CFPLYYEANSPEFPEVAVEDEMR*HAAGLS
Trigger: TGACAACCCTGCTGCGTGCCACCTCATTTCATCCTC...CACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp TGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGAACCAGACATACAACTaGCCTGCTGAGCTGACCCGT +
Preference number: 4 (lower is better)
Translates to: WAFVSPCTMKPIPLSFLRNQTYN*PAELTR
Trigger: ACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTT...CCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp ATTAGTTTCTGGCAAAACCAGACATACAACTGGCCTGCTGAGCTGACCCGTTCTGCTAGCTACGCCTCCTaGGTTCACGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ISFWQNQTYNWPAELTRSASYAS*VHAILL
Trigger: CAGGAGAATGGCGTGAACCCAGGAGGCGTAGCTAGC...AGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp TGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCTTGGTCTTGTGAACTaGAGTCTTATGGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: WGTGLGSESPLGASVIPDLGLVN*SLMELV
Trigger: TACCAGTTCCATAAGACTCCAGTTCACAAGACCAAG...GTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCTCACGTCCCAGAGGGTaGTGCTGTTATAGCAGATGT +
Preference number: 4 (lower is better)
Translates to: GKVVVSCTDQSPRGACPSSRPRG*CCYSRC
Trigger: ACATCTGCTATAACAGCACCACCCTCTGGGACGTGA...GCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGCTCGAGGAAAGGTGGTaGTTTCTTGTACAGATCAAA +
Preference number: 4 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQLEERW*FLVQIK
Trigger: TTTGATCTGTACAAGAAACCACCACCTTTCCTCGAG...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTACCTGTTACAGGCTTTaGTGCGGGCGAAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFTCYRL*CGRREQ
Trigger: CTGCTCCCTTCGCCCGCACCAAAGCCTGTAACAGGT...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp AGTCCACGTGGTGCCTGTCCCAGCTCCACCTGTCTCGATCCAACACAGGCTCCATGGGAGAAGTTTCTCTaGCAGACCTTGTTTTTAGAT +
Preference number: 4 (lower is better)
Translates to: SPRGACPSSTCLDPTQAPWEKFL*QTLFLD
Trigger: ATCTAAAAACAAGGTCTGCCAGAGAAACTTCTCCCA...TGGAGCCTGTGTTGGATCGAGACAGGTGGAGCTGGGACAGGCACCACGTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTCCAGGAGACTTTTGCTaGGAAGGCTGGCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFPGDFC*EGWQWS
Trigger: GCTCCACTGCCAGCCTTCCCAGCAAAAGTCTCCTGG...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp GGCTGGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAGTTCCAGGCCACAATCCCTTaGGGTTATGAGCCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: GWWRVRPQSYMPMENGKFQATIP*GYEPLV
Trigger: AACTAAGGGCTCATAACCCCAAGGGATTGTGGCCTG...GAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGCACAGTCTTTACTCCTaGCTCCAGGAATACTTTGGC +
Preference number: 4 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMHSLYS*LQEYFG
Trigger: GCCAAAGTATTCCTGGAGTCAGGAGTAAAGACTGTG...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATCACAGTCTTTACTCCTaGCTCCAGGAATACTTTGGC +
Preference number: 4 (lower is better)
Translates to: TGLGSESPLGASVIPDHHHSLYS*LQEYFG
Trigger: GCCAAAGTATTCCTGGAGTCAGGAGTAAAGACTGTG...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATCTCACTTCTGACTTATaGAAAGCTCCCACGTCGTCT +
Preference number: 4 (lower is better)
Translates to: TGLGSESPLGASVIPDHHLTSDL*KAPTSS
Trigger: AGACGACGTGGGAGCTTTTCATAAGTCAGAAGTGAG...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGCTCACTTCTGACTTATaGAAAGCTCCCACGTCGTCT +
Preference number: 4 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMLTSDL*KAPTSS
Trigger: AGACGACGTGGGAGCTTTTCATAAGTCAGAAGTGAG...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTCAAATGTCTCACTTCTaGCTTATGAAAAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRAQMSHF*LMKSSH
Trigger: GTGGGAGCTTTTCATAAGTCAGAAGTGAGACATTTG...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCAAATGTCTCACTTCTaGCTTATGAAAAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGQMSHF*LMKSSH
Trigger: GTGGGAGCTTTTCATAAGTCAGAAGTGAGACATTTG...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCTCGGGCTCTGCTTGGTaGGAACCTTGCAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFSGSAW*EPCKDF
Trigger: AAAGTCTTTGCAAGGTTCTCACCAAGCAGAGCCCGA...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp TGGTTAAGAGTGGAATGGTGTAAGGGAATGTTTGTGCTCCTCCAACAGCCAGTCCTGAACTGGAGGCTCTaGCTTACGGGGTTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: WLRVEWCKGMFVLLQQPVLNWRL*LTGFLP
Trigger: GGGCAAAAACCCCGTAAGTCAGAGCCTCCAGTTCAG...GACTGGCTGTTGGAGGAGCACAAACATTCCCTTACACCATTCCACTCTTAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp TGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGCACCAAGGCGTTCATTaGAACAGCATGTTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: WAFVSPCTMKPIPLSFLRHQGVH*NSMLLH
Trigger: GTGGAGCAACATGCTGTTTCAATGAACGCCTTGGTG...CCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515659.1
CDS-3UTR TCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCATTTGCTCCTCGGTCATaGTCGGAACTTCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPFAPRS*SELLFL
Trigger: TAAAAACAGAAGTTCCGATCATGACCGAGGAGCAAA...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAACAGTTTCTCATCTGTaGGTTCTTCTTGCGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LGSESPLGASVIPDHHGGTVSHL*VLLAKG
Trigger: CCCTTTCGCAAGAAGAACTCACAGATGAGAAACTGT...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp GAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGAATCCTGTGAGTACGTaGATCTCTTTCTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EQLVLKRVANILINLYGMNPVST*ISFLAP
Trigger: AGGAGCCAAGAAAGAGATTCACGTACTCACAGGATT...CATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR TCA 90 bp TGTGGTCCTTGGGTGGTCTGGAGCTCTAAAATGCCTATTGTGGACACTCCCTTGGCCATCACGTTCACCTaGCCTAGTTTTCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: CGPWVVWSSKMPIVDTPLAITFT*PSFLGE
Trigger: TTCTCCCAGAAAACTAGGTCAGGTGAACGTGATGGC...CAAGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGACCACCCAAGGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp GGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGACCCCCTCTCAGTGAAACCTaGAGTTCTGTTAGTGATAGC +
Preference number: 4 (lower is better)
Translates to: GCLEFLCTGEVWGGAVRPPLSET*SSVSDS
Trigger: GCTATCACTAACAGAACTTCAGGTTTCACTGAGAGG...GGGTCTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGGCTTTGTCACCTTCGTaGCACGGCTTCACAGTCTTT +
Preference number: 4 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWALSPS*HGFTVF
Trigger: AAAGACTGTGAAGCCGTGGCACGAAGGTGACAAAGC...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp CTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGCTTTGTCACCTTCGTaGCACGGCTTCACAGTCTTT +
Preference number: 4 (lower is better)
Translates to: LGLCFPLYYEANSPEFPEALSPS*HGFTVF
Trigger: AAAGACTGTGAAGCCGTGGCACGAAGGTGACAAAGC...CTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp GAGCTGACCCGTTCTCTGTCGATGACCATAGGCTATGTCATGGGTATAATGGAGTGCTGGAAACAGTCATaGCAGGCAGGCCCAAATGGT +
Preference number: 4 (lower is better)
Translates to: ELTRSLSMTIGYVMGIMECWKQS*QAGPNG
Trigger: ACCATTTGGGCCTGCCTGGCATGACTGTTTCCAGCA...CTCCATTATACCCATGACATAGCCTATGGTCATCGACAGAGAACGGGTCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp TGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGGTAAGGGAATGTTTGTaGTCCTCCAACAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: CFPLYYEANSPEFPEVAVVRECL*SSNSQS
Trigger: GGACTGGCTGTTGGAGGAGCACAAACATTCCCTTAC...CACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp CTTCCCCACTTTATAGCCAAGAAACCAGACCCAGGGCATGAAGGGATTTGCCTCAACTGTCAGTATCTTTaGCGCTGGAAGGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LPHFIAKKPDPGHEGICLNCQYL*RWKVPV
Trigger: CACTGGGACCTTCCAGCGGCAAAGATACTGACAGTT...GAGGCAAATCCCTTCATGCCCTGGGTCTGGTTTCTTGGCTATAAAGTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp GGCTGGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAGTTCGGCCTCAGTCTTACATaGCAATGGAGAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GWWRVRPQSYMPMENGKFGLSLT*QWRMAS
Trigger: ACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCC...GAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp TGCCTGCACCCAGGTGAAATAAACAGCCTTGTTACTTACACAAAGCCTGTTTGGGGATCCACAGCCACCTaGGCGAAGAGACTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: CLHPGEINSLVTYTKPVWGSTAT*AKRLQD
Trigger: GTCTTGGAGTCTCTTCGCCCAGGTGGCTGTGGATCC...CCAAACAGGCTTTGTGTAAGTAACAAGGCTGTTTATTTCACCTGGGTGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAACTCCAGGAATACTTTaGCCACCATTGGAAATAGCA +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPTPGIL*PPLEIA
Trigger: TGCTATTTCCAATGGTGGCCAAAGTATTCCTGGAGT...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp CAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCACGCTTATGGCCGTTCTaGCCACAAGACAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QTELGSSPGFTFPSCVISRLWPF*PQDKQE
Trigger: CTCCTGCTTGTCTTGTGGCCAGAACGGCCATAAGCG...TGAGATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp CAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCAGGTAGCTACCCTCTCTaGGCCTTTGTTTCCCCCTGT +
Preference number: 4 (lower is better)
Translates to: QTELGSSPGFTFPSCVISGSYPL*AFVSPC
Trigger: ACAGGGGGAAACAAAGGCCCAGAGAGGGTAGCTACC...TGAGATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp GGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTGAAGCGGGTGGCATCCCAAACTCTTaGCTCAAGTCTTTTATCATA +
Preference number: 4 (lower is better)
Translates to: GASVIPDHHGGAAGTEAGGIPNS*LKSFII
Trigger: TATGATAAAAGACTTGAGCCAAGAGTTTGGGATGCC...ACCCGCTTCAGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTTTCTCCTGGTGGGCGTaGATCTCTAAGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFFSWWA*ISKVRV
Trigger: CACCCTCACCTTAGAGATCCACGCCCACCAGGAGAA...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp TGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGCTCACTTCTGACTTATaGAAAGCTCCCACGTCGTCT +
Preference number: 4 (lower is better)
Translates to: WAFVSPCTMKPIPLSFLRLTSDL*KAPTSS
Trigger: AGACGACGTGGGAGCTTTTCATAAGTCAGAAGTGAG...CCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGGTTCGACTCTTCTCTaGCAATGTTGGTATTCTCAA +
Preference number: 4 (lower is better)
Translates to: LGSESPLGASVIPDHHGGGSTLL*QCWYSQ
Trigger: TTGAGAATACCAACATTGTCAGAGAAGAGTCGAACC...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAAATGGTTGGTGTTCTTaGAACACTCCATTGAATCGT +
Preference number: 4 (lower is better)
Translates to: MWGTGLGSESPLGASVIPNGWCS*NTPLNR
Trigger: ACGATTCAATGGAGTGTTTCAAGAACACCAACCATT...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR TCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCTTTCTCAAACTGAATTaGCACCAACCCAAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFFLKLN*HQPKSA
Trigger: CGCGCTCTTGGGTTGGTGTCAATTCAGTTTGAGAAA...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGGCAGGCCCAAATGGTTaGACTTCTTTTTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWAGPNG*TSFSSH
Trigger: GTGAGAGGAAAAAGAAGTTCAACCATTTGGGCCTGC...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp TGCCTGCACCCAGGTGAAATAAACAGCCTTGTTACTTACACAAAGCCTGTTTGGATACAACTGGCCTGCTaGGCTGACCCGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: CLHPGEINSLVTYTKPVWIQLAC*ADPFSV
Trigger: GACAGAGAACGGGTCAGCTCAGCAGGCCAGTTGTAT...CCAAACAGGCTTTGTGTAAGTAACAAGGCTGTTTATTTCACCTGGGTGCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp GGCTGCTTAGAGTTTCTTTGCACAGGAGAAGTTTGGGGAGGGGCTGTCAGACCCGCATTTTGCACAAAATaGAGCATGCATACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GCLEFLCTGEVWGGAVRPAFCTK*SMHTSG
Trigger: TCCAGAGGTATGCATGCTTCATTTTGTGCAAAATGC...GGGTCTGACAGCCCCTCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp CGAGAAAGTGAAGGTGATCAGGAAGGACAAGCTGTAGGTGAAGTATCATTTTCACATGTAGCGACATGCTaGAGAGCGCACTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: RESEGDQEGQAVGEVSFSHVATC*RAHCWP
Trigger: CGGCCAGCAGTGCGCTCTGCAGCATGTCGCTACATG...TGAAAATGATACTTCACCTACAGCTTGTCCTTCCTGATCACCTTCACTTTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCGTGATATTAAAAGTCTaGTCCCACGACACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFVILKV*SHDTQA
Trigger: AGCCTGGGTGTCGTGGGAGCAGACTTTTAATATCAC...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGAGAAGTTTCGGGCTCTaGTTGGTGAGAACCTTGCAA +
Preference number: 4 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWRSFGL*LVRTLQ
Trigger: TTGCAAGGTTCTCACCAAGCAGAGCCCGAAACTTCT...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp AACTATGATAACCACCACAGCCACCACCACACCACAGGTTGGCTGAGTGGGTCACCCCTTCTCTATGAATaGTGGTTCCAGCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: NYDNHHSHHHTTGWLSGSPLLYE*WFQLRK
Trigger: TTTTCTGAGCTGGAACCAGCATTCATAGAGAAGGGG...TGACCCACTCAGCCAACCTGTGGTGTGGTGGTGGCTGTGGTGGTTATCATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp CCCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTTTTTCAGACTCAGCCTaGCTGCACCCAGGTGAAATA +
Preference number: 4 (lower is better)
Translates to: PSLGLCFPLYYEANSPEFFSDSA*LHPGEI
Trigger: TATTTCACCTGGGTGCAGGCAGGCTGAGTCTGAAAA...AAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGGG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp TCCTTAACCTTGTGTGGTTGCTGTCATCTCCACATTACAGATGGGGGAAATGAGAACAGAATTCCAGGCTaGGGGCTCACAGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: SLTLCGCCHLHITDGGNENRIPG*GLTAST
Trigger: TGTGGAGGCTGTGAGCCCGCAGCCTGGAATTCTGTT...CTCATTTCCCCCATCTGTAATGTGGAGATGACAGCAACCACACAAGGTTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTTGCCATCTGTCCTGCTaGACTTTAATGAAGTTGATT +
Preference number: 4 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRACHLSC*TLMKLI
Trigger: AATCAACTTCATTAAAGTGCAGCAGGACAGATGGCA...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR GCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGATTGAAACAGCATGTTaGTCCACACCGCCTCGTGTT +
Preference number: 4 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWIETAC*STPPRV
Trigger: AACACGAGGCGGTGTGGAGCAACATGCTGTTTCAAT...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515659.1
CDS-3UTR GCA 90 bp TTGAGAGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTTTTCAGACCCATTCTaGATCTTGCTTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: LRATAVTVGLGHAHREQVFSDPF*ILLFLA
Trigger: TGCTAAGAAAAGCAAGATGCAGAATGGGTCTGAAAA...GACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp GGCTGGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAGTTCTCTGGAGCTCTAAAATaGCTATTGTGGACACTCCCT +
Preference number: 4 (lower is better)
Translates to: GWWRVRPQSYMPMENGKFSGALK*LLWTLP
Trigger: AGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGA...GAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATATTCCTCACTGTTCTTaGAAGAAGTTTCGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TGLGSESPLGASVIPDHHIPHCS*KKFRAL
Trigger: CAGAGCCCGAAACTTCTTCCAAGAACAGTGAGGAAT...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCGGAATCAAACAGAGCTaGGTTCAAGTCCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFGIKQS*VQVQAS
Trigger: TGAAGCCTGGACTTGAACCCAGCTCTGTTTGATTCC...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp GTGGCAGAGGCGGGAGGCTTGCTTCAGGCTGGAGTGAGCTATGATCATGTCACTTGGTTAAGAGTGGAATaGTGTAAGGGAATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: VAEAGGLLQAGVSYDHVTWLRVE*CKGMFV
Trigger: CACAAACATTCCCTTACACCATTCCACTCTTAACCA...AGTGACATGATCATAGCTCACTCCAGCCTGAAGCAAGCCTCCCGCCTCTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp AGTTTCTGGCAAAACCAGACATACAACTGGCCTGCTGAGCTGACCCGTTCTCTGGCATATTTTCCCTTCTaGCCCATATTCACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SFWQNQTYNWPAELTRSLAYFPF*PIFTGK
Trigger: CTTCCCTGTGAATATGGGTCAGAAGGGAAAATATGC...CAGAGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGGGTTCGACTCTTCTCTaGCAATGTTGGTATTCTCAA +
Preference number: 4 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMGSTLL*QCWYSQ
Trigger: TTGAGAATACCAACATTGTCAGAGAAGAGTCGAACC...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp GGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATAATCGACTTAGAGAATaGATGGATGAAGGAACAACA +
Preference number: 4 (lower is better)
Translates to: GTGLGSESPLGASVIPDHNRLRE*MDEGTT
Trigger: TGTTGTTCCTTCATCCATTCATTCTCTAAGTCGATT...ATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR TCA 90 bp GGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCAATCCCTTGGGGTTATaGGCCCTTAGTTTTTATCCT +
Preference number: 4 (lower is better)
Translates to: GKVVVSCTDQSPRGACPSNPLGL*ALSFYP
Trigger: AGGATAAAAACTAAGGGCTCATAACCCCAAGGGATT...GCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp CCCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCATCATGCTTGCTCCTaGCAAAGAAATGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PSLGLCFPLYYEANSPEFHHACS*QRNGWC
Trigger: ACACCAACCATTTCTTTGGCAGGAGCAAGCATGATG...AAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp TGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGCATCATGCTTGCTCCTaGCAAAGAAATGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: CFPLYYEANSPEFPEVAVHHACS*QRNGWC
Trigger: ACACCAACCATTTCTTTGGCAGGAGCAAGCATGATG...CACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp CCCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTGATCTCCATCATGCTTaGTCCTGCCAAAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: PSLGLCFPLYYEANSPEFDLHHA*SCQRNG
Trigger: ACCATTTCTTTGGCAGGAGCAAGCATGATGGAGATC...AAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp TGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGGATCTCCATCATGCTTaGTCCTGCCAAAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: CFPLYYEANSPEFPEVAVDLHHA*SCQRNG
Trigger: ACCATTTCTTTGGCAGGAGCAAGCATGATGGAGATC...CACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp CAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCAGTGACCTGCATGTATACTTTAAAACTGCAAACTaGCAAATGCGGCAGCTCATG +
Preference number: 4 (lower is better)
Translates to: QASEPKLSHHIPSDLHVYFKTAN*QMRQLM
Trigger: CATGAGCTGCCGCATTTGGCAGTTTGCAGTTTTAAA...GTATACATGCAGGTCACTGGGGATATGATGGCTTAGCTTGGGCTCAGAGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp ATTGACACCAACCCAAGAGCGCGAGAGGAGGATGACGACTGGCACCTGTGGAACACACCCAGCCCAGAATaGTTTTTCTATAAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: IDTNPRAREEDDDWHLWNTPSPE*FFYKRY
Trigger: ATACCTTTTATAGAAAAAGCATTCTGGGCTGGGTGT...GTTCCACAGGTGCCAGTCGTCATCCTCCTCTCGCGCTCTTGGGTTGGTGTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGACTCCAGGAATACTTTaGCCACCATTGGAAATAGCA +
Preference number: 4 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMTPGIL*PPLEIA
Trigger: TGCTATTTCCAATGGTGGCCAAAGTATTCCTGGAGT...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCATTCCTCACTGTTCTTaGAAGAAGTTTCGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFIPHCS*KKFRAL
Trigger: CAGAGCCCGAAACTTCTTCCAAGAACAGTGAGGAAT...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGCTCCTGCCAAAGAAATaGTTGGTGTTCTTGAAACAC +
Preference number: 4 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMLLPKK*LVFLKH
Trigger: GTGTTTCAAGAACACCAACCATTTCTTTGGCAGGAG...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATCTCGAGGAAAGGTGGTaGTTTCTTGTACAGATCAAA +
Preference number: 4 (lower is better)
Translates to: TGLGSESPLGASVIPDHHLEERW*FLVQIK
Trigger: TTTGATCTGTACAAGAAACCACCACCTTTCCTCGAG...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CCA 90 bp GGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCCCTAGAGATCAGTCATaGGTAATAGTGTTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GKVVVSCTDQSPRGACPSPRDQS*VIVLKL
Trigger: GAGCTTCAACACTATTACCCATGACTGATCTCTAGG...GCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTCAGCCTCCCTTCTGCTaGCACTTGAAAGATTACACC +
Preference number: 4 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFQPPFC*HLKDYT
Trigger: GGTGTAATCTTTCAAGTGCCAGCAGAAGGGAGGCTG...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp CTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGCAAATGTCTCACTTCTaGCTTATGAAAAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LGLCFPLYYEANSPEFPEQMSHF*LMKSSH
Trigger: GTGGGAGCTTTTCATAAGTCAGAAGTGAGACATTTG...CTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGTCTCAATTAATTCCTTaGTCTCCATCATGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMSQLIP*SPSCLL
Trigger: GAGCAAGCATGATGGAGATCAAGGAATTAATTGAGA...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTGTATTTCCTGTGTTCTaGCCTGGGAATCCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFVFPVF*PGNPAL
Trigger: CAAAGCTGGATTCCCAGGTCAGAACACAGGAAATAC...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp CAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCAGTGATATTAAAAGTCTaGTCCCACGACACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QTELGSSPGFTFPSCVISVILKV*SHDTQA
Trigger: AGCCTGGGTGTCGTGGGAGCAGACTTTTAATATCAC...TGAGATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp TGGTTAAGAGTGGAATGGTGTAAGGGAATGTTTGTGCTCCTCCAACAGCCAGTCGGAATCAAACAGAGCTaGGTTCAAGTCCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: WLRVEWCKGMFVLLQQPVGIKQS*VQVQAS
Trigger: TGAAGCCTGGACTTGAACCCAGCTCTGTTTGATTCC...GACTGGCTGTTGGAGGAGCACAAACATTCCCTTACACCATTCCACTCTTAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp CTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGGCTTCCTTGGATTTTaGAATCAAACAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LCFPLYYEANSPEFPEVAGFLGF*NQTELG
Trigger: ACCCAGCTCTGTTTGATTCCAAAATCCAAGGAAGCC...AGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGTCCCATAGGCTTCCTTaGATTTTGGAATCAAACAGA +
Preference number: 4 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMSHRLP*ILESNR
Trigger: TCTGTTTGATTCCAAAATCCAAGGAAGCCTATGGGA...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp TGGTTAAGAGTGGAATGGTGTAAGGGAATGTTTGTGCTCCTCCAACAGCCAGTCCCAGGCAGGCCCAAATaGTTGAACTTCTTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: WLRVEWCKGMFVLLQQPVPGRPK*LNFFFL
Trigger: GAGGAAAAAGAAGTTCAACCATTTGGGCCTGCCTGG...GACTGGCTGTTGGAGGAGCACAAACATTCCCTTACACCATTCCACTCTTAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGATCCTTAACCTTGTGTaGTTGCTGTCATCTCCACAT +
Preference number: 4 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWILNLV*LLSSPH
Trigger: ATGTGGAGATGACAGCAACCACACAAGGTTAAGGAT...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp CTTCTTACCAAGGAAAAGCCTTGTGTTCTTAGGCTAGACAGCTCTCCTAGCTGGCAGCTCTTTGATGGGTaGCAGCTTGAGATCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LLTKEKPCVLRLDSSPSWQLFDG*QLEILK
Trigger: TTTCAGGATCTCAAGCTGCCACCCATCAAAGAGCTG...CCAGCTAGGAGAGCTGTCTAGCCTAAGAACACAAGGCTTTTCCTTGGTAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp CTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGGTTCGACTCTTCTCTaGCAATGTTGGTATTCTCAA +
Preference number: 4 (lower is better)
Translates to: LCFPLYYEANSPEFPEVAGSTLL*QCWYSQ
Trigger: TTGAGAATACCAACATTGTCAGAGAAGAGTCGAACC...AGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGAAGAATCGTCCATTTTaGGGGACTTCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWKNRPF*GTSHIP
Trigger: AGGAATATGAGAAGTCCCTCAAAATGGACGATTCTT...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp AACTATGATAACCACCACAGCCACCACCACACCACAGGTTGGCTGAGTGGGTCAAGGACAAGCTGTAGGTaGAGTATCATTTTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: NYDNHHSHHHTTGWLSGSRTSCR*SIIFKK
Trigger: CTTTTTGAAAATGATACTTCACCTACAGCTTGTCCT...TGACCCACTCAGCCAACCTGTGGTGTGGTGGTGGCTGTGGTGGTTATCATAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp ATCCCTGTTTGGCCACTGAGCTGTGTGGGATTAGGAAAGTTACTTAACCTCTTTGACATTCCACCATTGTaGTTTGTTTCTGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: IPVWPLSCVGLGKLLNLFDIPPL*FVSAPP
Trigger: GGGTGGGGCAGAAACAAATCACAATGGTGGAATGTC...AAAGAGGTTAAGTAACTTTCCTAATCCCACACAGCTCAGTGGCCAAACAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCCAAAGTTCTTACATGTaGACCCCTGCACTGTACAGC +
Preference number: 4 (lower is better)
Translates to: NQTELGSSPGFTFPSCVIQSSYM*TPALYS
Trigger: GCTGTACAGTGCAGGGGTTCACATGTAAGAACTTTG...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp TCCTTAACCTTGTGTGGTTGCTGTCATCTCCACATTACAGATGGGGGAAATGAGGGATTGACCTGGGTTTaGATCCCAGATCTGACTCTT +
Preference number: 4 (lower is better)
Translates to: SLTLCGCCHLHITDGGNEGLTWV*IPDLTL
Trigger: AAGAGTCAGATCTGGGATTCAAACCCAGGTCAATCC...CTCATTTCCCCCATCTGTAATGTGGAGATGACAGCAACCACACAAGGTTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CTTCTTACCAAGGAAAAGCCTTGTGTTCTTAGGCTAGACAGCTCTCCTAGCTGGACAGTTTCTCATCTGTaGGTTCTTCTTGCGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LLTKEKPCVLRLDSSPSWTVSHL*VLLAKG
Trigger: CCCTTTCGCAAGAAGAACTCACAGATGAGAAACTGT...CCAGCTAGGAGAGCTGTCTAGCCTAAGAACACAAGGCTTTTCCTTGGTAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp CATGTTGTGGGAAGAGGAGACCCCAGCAAGTGTTTCTTAAGTGATTTCACCAGTCTTGTTGGCAGGGGCTaGAATTTTAATCACCTTCGC +
Preference number: 4 (lower is better)
Translates to: HVVGRGDPSKCFLSDFTSLVGRG*NFNHLR
Trigger: GCGAAGGTGATTAAAATTTCAGCCCCTGCCAACAAG...ACTGGTGAAATCACTTAAGAAACACTTGCTGGGGTCTCCTCTTCCCACAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp ATGAAGCATGCATACCTCTGGACAGAAGGCTGCTTAGAGTTTCTTTGCACAGGAATGTCTCTTTCTCCCTaGACAAAGGTTCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: MKHAYLWTEGCLEFLCTGMSLSP*TKVLAL
Trigger: CAGAGCCAGAACCTTTGTTCAGGGAGAAAGAGACAT...TCCTGTGCAAAGAAACTCTAAGCAGCCTTCTGTCCAGAGGTATGCATGCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp ATGAAGCATGCATACCTCTGGACAGAAGGCTGCTTAGAGTTTCTTTGCACAGGATCTGTGAGTTCTTCTTaGGAAAGGGGCATCCCAAAC +
Preference number: 4 (lower is better)
Translates to: MKHAYLWTEGCLEFLCTGSVSSS*ERGIPN
Trigger: GTTTGGGATGCCCCTTTCGCAAGAAGAACTCACAGA...TCCTGTGCAAAGAAACTCTAAGCAGCCTTCTGTCCAGAGGTATGCATGCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp CAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCAATTCCTCACTGTTCTTaGAAGAAGTTTCGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QTELGSSPGFTFPSCVISIPHCS*KKFRAL
Trigger: CAGAGCCCGAAACTTCTTCCAAGAACAGTGAGGAAT...TGAGATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp ATCCCTGTTTGGCCACTGAGCTGTGTGGGATTAGGAAAGTTACTTAACCTCTTTCACAGGTTGGCTGAGTaGGTCAGAATTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: IPVWPLSCVGLGKLLNLFHRLAE*VRIWSE
Trigger: CTCAGACCAAATTCTGACCCACTCAGCCAACCTGTG...AAAGAGGTTAAGTAACTTTCCTAATCCCACACAGCTCAGTGGCCAAACAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CAA 72 bp CTTGCTGGTAAGTGGCTGAGCCATGATCAAAGTGTTTaGGTCACCAAAGTTCTTACATGTGAACCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LAGKWLSHDQSV*VTKVLTCEPLH
Trigger: GTGCAGGGGTTCACATGTAAGAACTTTGGTGACCAAAACACTTTGATCATGGCTCAGCCACTTACCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGTCCAGAGCCTCAAGGTaGTTTTGTGGAAATTTATTT +
Preference number: 4 (lower is better)
Translates to: LGLCFPLYYEANSPEFPESRASR*FCGNLF
Trigger: AAATAAATTTCCACAAAATCACCTTGAGGCTCTGGA...CTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp CAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCACAAATGTCTCACTTCTaGCTTATGAAAAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QTELGSSPGFTFPSCVISQMSHF*LMKSSH
Trigger: GTGGGAGCTTTTCATAAGTCAGAAGTGAGACATTTG...TGAGATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp CTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTTCTCAATTAATTCCTTaGTCTCCATCATGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LCFPLYYEANSPEFPEVASQLIP*SPSCLL
Trigger: GAGCAAGCATGATGGAGATCAAGGAATTAATTGAGA...AGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp TCCTTAACCTTGTGTGGTTGCTGTCATCTCCACATTACAGATGGGGGAAATGAGACTCTCTGTCACTGTTaGCTCTCAAGAGGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SLTLCGCCHLHITDGGNETLCHC*LSRGSD
Trigger: ATCAGAACCTCTTGAGAGGCAACAGTGACAGAGAGT...CTCATTTCCCCCATCTGTAATGTGGAGATGACAGCAACCACACAAGGTTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp CATGTTGTGGGAAGAGGAGACCCCAGCAAGTGTTTCTTAAGTGATTTCACCAGTCTCTGGACAGAAGGCTaGTTAGAGTTTCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: HVVGRGDPSKCFLSDFTSLWTEG*LEFLCT
Trigger: TGTGCAAAGAAACTCTAAGCAGCCTTCTGTCCAGAG...ACTGGTGAAATCACTTAAGAAACACTTGCTGGGGTCTCCTCTTCCCACAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR GCA 90 bp CCAGCTCTTGGCTGGACACCTAGAGATCAGTCATGGGTAATAGTGTTGAAGCTCTGTACTGTTAGCCTTTaGTGTACTTGTCACACTGTT +
Preference number: 4 (lower is better)
Translates to: PALGWTPRDQSWVIVLKLCTVSL*CTCHTV
Trigger: AACAGTGTGACAAGTACAGCAAAGGCTAACAGTACA...GAGCTTCAACACTATTACCCATGACTGATCTCTAGGTGTCCAGCCAAGAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp CAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCACTCCTGCCAAAGAAATaGTTGGTGTTCTTGAAACAC +
Preference number: 4 (lower is better)
Translates to: QTELGSSPGFTFPSCVISLLPKK*LVFLKH
Trigger: GTGTTTCAAGAACACCAACCATTTCTTTGGCAGGAG...TGAGATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp TGCCTGCACCCAGGTGAAATAAACAGCCTTGTTACTTACACAAAGCCTGTTTGGGGCTTCCTTGGATTTTaGAATCAAACAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CLHPGEINSLVTYTKPVWGFLGF*NQTELG
Trigger: ACCCAGCTCTGTTTGATTCCAAAATCCAAGGAAGCC...CCAAACAGGCTTTGTGTAAGTAACAAGGCTGTTTATTTCACCTGGGTGCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp CATGTTGTGGGAAGAGGAGACCCCAGCAAGTGTTTCTTAAGTGATTTCACCAGTCATGCCAATGGAGAATaGCAAGTTCTCCATTCATCC +
Preference number: 4 (lower is better)
Translates to: HVVGRGDPSKCFLSDFTSHANGE*QVLHSS
Trigger: GGATGAATGGAGAACTTGCCATTCTCCATTGGCATG...ACTGGTGAAATCACTTAAGAAACACTTGCTGGGGTCTCCTCTTCCCACAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp CTTCTTACCAAGGAAAAGCCTTGTGTTCTTAGGCTAGACAGCTCTCCTAGCTGGAGTCTTACATGCCAATaGAGAATGGCAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTKEKPCVLRLDSSPSWSLTCQ*RMASSP
Trigger: TGGAGAACTTGCCATTCTCCATTGGCATGTAAGACT...CCAGCTAGGAGAGCTGTCTAGCCTAAGAACACAAGGCTTTTCCTTGGTAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR TCA 90 bp ATTAGTTTCTGGCAAAACCAGACATACAACTGGCCTGCTGAGCTGACCCGTTCTAATGGTTGGTGTTCTTaGAACACTCCATTGAATCGT +
Preference number: 4 (lower is better)
Translates to: ISFWQNQTYNWPAELTRSNGWCS*NTPLNR
Trigger: ACGATTCAATGGAGTGTTTCAAGAACACCAACCATT...AGAACGGGTCAGCTCAGCAGGCCAGTTGTATGTCTGGTTTTGCCAGAAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp TCCTTAACCTTGTGTGGTTGCTGTCATCTCCACATTACAGATGGGGGAAATGAGGGTCAGAATTTGGTCTaGGAAGTAAGTGATGTGTCA +
Preference number: 4 (lower is better)
Translates to: SLTLCGCCHLHITDGGNEGQNLV*EVSDVS
Trigger: TGACACATCACTTACTTCTCAGACCAAATTCTGACC...CTCATTTCCCCCATCTGTAATGTGGAGATGACAGCAACCACACAAGGTTAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp CTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGTGTTGGTATTCTCAATaGCCTGTTCAGATAATTTTC +
Preference number: 4 (lower is better)
Translates to: LGLCFPLYYEANSPEFPECWYSQ*PVQIIF
Trigger: GAAAATTATCTGAACAGGGCATTGAGAATACCAACA...CTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGTGTTGGTATTCTCAATaGCCTGTTCAGATAATTTTC +
Preference number: 4 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWCWYSQ*PVQIIF
Trigger: GAAAATTATCTGAACAGGGCATTGAGAATACCAACA...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp ATCCCTGTTTGGCCACTGAGCTGTGTGGGATTAGGAAAGTTACTTAACCTCTTTCAGGGGACAGTCCTGTaGATTATGGCATGTTTAACA +
Preference number: 4 (lower is better)
Translates to: IPVWPLSCVGLGKLLNLFQGTVL*IMACLT
Trigger: TGTTAAACATGCCATAATGCACAGGACTGTCCCCTG...AAAGAGGTTAAGTAACTTTCCTAATCCCACACAGCTCAGTGGCCAAACAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR GCA 90 bp CATGTTGTGGGAAGAGGAGACCCCAGCAAGTGTTTCTTAAGTGATTTCACCAGTTGCTTAGAGTTTCTTTaGACAGGAGAAGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: HVVGRGDPSKCFLSDFTSCLEFL*TGEVWG
Trigger: TCCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCA...ACTGGTGAAATCACTTAAGAAACACTTGCTGGGGTCTCCTCTTCCCACAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CCA 90 bp TGCCTGCACCCAGGTGAAATAAACAGCCTTGTTACTTACACAAAGCCTGTTTGGACTCCAGGAATACTTTaGCCACCATTGGAAATAGCA +
Preference number: 4 (lower is better)
Translates to: CLHPGEINSLVTYTKPVWTPGIL*PPLEIA
Trigger: TGCTATTTCCAATGGTGGCCAAAGTATTCCTGGAGT...CCAAACAGGCTTTGTGTAAGTAACAAGGCTGTTTATTTCACCTGGGTGCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTGGCATCCCAAACTCTTaGCTCAAGTCTTTTATCATA +
Preference number: 4 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFGIPNS*LKSFII
Trigger: TATGATAAAAGACTTGAGCCAAGAGTTTGGGATGCC...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
3UTR CAA 72 bp TCCCAAACATGCGCTAATGTCATTTCATCCTTAACCTaGTGTGGTTGCTGTCATCTCCACATTACAGATGGG +
Preference number: 4 (lower is better)
Translates to: SQTCANVISSLT*CGCCHLHITDG
Trigger: CCCATCTGTAATGTGGAGATGACAGCAACCACACAAGGTTAAGGATGAAATGACATTAGCGCATGTTTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CAA 72 bp AGGATTGACCTGGGTTTGAATCCCAGATCTGACTCTTaGTCATGTGATAAGCTAGAGTCTCCAAGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: RIDLGLNPRSDS*SCDKLESPRLN
Trigger: ATTGAGCCTTGGAGACTCTAGCTTATCACATGACAAAGAGTCAGATCTGGGATTCAAACCCAGGTCAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
3UTR CAA 72 bp ATCACCTCAAGTTTTGGAGGCAGGATTGACCTGGGTTaGAATCCCAGATCTGACTCTTTGTCATGTGATAAG +
Preference number: 4 (lower is better)
Translates to: ITSSFGGRIDLG*NPRSDSLSCDK
Trigger: CTTATCACATGACAAAGAGTCAGATCTGGGATTCAAACCCAGGTCAATCCTGCCTCCAAAACTTGAGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp ATGCCTGTAAATGTATTTCTAGGGCATGTAAAAGCCAAGTCGCTCACATTCAGACACAGTCTTTACTCCTaGCTCCAGGAATACTTTGGC +
Preference number: 4 (lower is better)
Translates to: MPVNVFLGHVKAKSLTFRHSLYS*LQEYFG
Trigger: GCCAAAGTATTCCTGGAGTCAGGAGTAAAGACTGTG...TCTGAATGTGAGCGACTTGGCTTTTACATGCCCTAGAAATACATTTACAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp CAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCATCCAGAGCCTCAAGGTaGTTTTGTGGAAATTTATTT +
Preference number: 4 (lower is better)
Translates to: QTELGSSPGFTFPSCVISSRASR*FCGNLF
Trigger: AAATAAATTTCCACAAAATCACCTTGAGGCTCTGGA...TGAGATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR TCA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCAATGGTTGGTGTTCTTaGAACACTCCATTGAATCGT +
Preference number: 4 (lower is better)
Translates to: NQTELGSSPGFTFPSCVINGWCS*NTPLNR
Trigger: ACGATTCAATGGAGTGTTTCAAGAACACCAACCATT...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR GCA 90 bp ATGCCTGTAAATGTATTTCTAGGGCATGTAAAAGCCAAGTCGCTCACATTCAGACTCAAAGCTACTGTGTaGAATAGGTATGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: MPVNVFLGHVKAKSLTFRLKATV*NRYAGG
Trigger: CCCTCCAGCATACCTATTGCACACAGTAGCTTTGAG...TCTGAATGTGAGCGACTTGGCTTTTACATGCCCTAGAAATACATTTACAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCCCATAGGCTTCCTTaGATTTTGGAATCAAACAGA +
Preference number: 4 (lower is better)
Translates to: NQTELGSSPGFTFPSCVISHRLP*ILESNR
Trigger: TCTGTTTGATTCCAAAATCCAAGGAAGCCTATGGGA...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CCA 90 bp CGAGAAAGTGAAGGTGATCAGGAAGGACAAGCTGTAGGTGAAGTATCATTTTCACTTCTCTATGAATGCTaGTTCCAGCTCAGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: RESEGDQEGQAVGEVSFSLLYEC*FQLRKD
Trigger: GTCTTTTCTGAGCTGGAACCAGCATTCATAGAGAAG...TGAAAATGATACTTCACCTACAGCTTGTCCTTCCTGATCACCTTCACTTTCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CCA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTTTCTAGAATCTTACTaGGTTACTAGCCAACCAATA +
Preference number: 4 (lower is better)
Translates to: NQTELGSSPGFTFPSCVIFLESY*VTSQPI
Trigger: TATTGGTTGGCTAGTAACCCAGTAAGATTCTAGAAA...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR TCA 90 bp ATGCCTGTAAATGTATTTCTAGGGCATGTAAAAGCCAAGTCGCTCACATTCAGAAAGAATCGTCCATTTTaGGGGACTTCTCATATTCCT +
Preference number: 4 (lower is better)
Translates to: MPVNVFLGHVKAKSLTFRKNRPF*GTSHIP
Trigger: AGGAATATGAGAAGTCCCTCAAAATGGACGATTCTT...TCTGAATGTGAGCGACTTGGCTTTTACATGCCCTAGAAATACATTTACAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS CCA 90 bp CGCCGGCGCTCCTGCGAGCGGATGCGCTGGGCGGCAGCGGGGAGTTaGACCGCGGCGGCAACTCCCGTACCGGATCCACAGCCACCTGGG +
Preference number: 5 (lower is better)
Translates to: RRRSCERMRWAAAGS*TAAATPVPDPQPPG
Trigger: CCCAGGTGGCTGTGGATCCGGTACGGGAGTTGCCGCCGCGGTCCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGAGCGCCGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000645291.2
CDS CCA 90 bp GCTGGCGGTACCTGCGAGCGGATGCGCTGGGCGGCAGCGGGGAGTTaGACCGCGGCGGCAACTCCCGTACCGGATCCACAGCCACCTGGG +
Preference number: 5 (lower is better)
Translates to: AGGTCERMRWAAAGS*TAAATPVPDPQPPG
Trigger: CCCAGGTGGCTGTGGATCCGGTACGGGAGTTGCCGCCGCGGTCCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGTACCGCCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS GCA 90 bp TGCTTGCGGGGTCCTCTTCCCACTCCCAGGCATGTAGCGACATGCTaGAGAGCGCACTGCTGGCCGCCGGCGCTCCTGCGAGCGGATGCG +
Preference number: 5 (lower is better)
Translates to: CLRGPLPTPRHVATC*RAHCWPPALLRADA
Trigger: CGCATCCGCTCGCAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCATGTCGCTACATGCCTGGGAGTGGGAAGAGGACCCCGCAAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000645291.2
CDS-3UTR CAA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGGCCGCTCCATCCGCATaGGGCTCCGCAACCACGACC +
Preference number: 5 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLAAPSA*GSATTT
Trigger: GGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGC...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS TCA 90 bp CTAACCAGGAGTCAGTCGCCGGGCTTCTGGAATGCCTGCCCCAGGTaGGCAGCTCCCGGGAGCCACCAGGCGGGAGAGGGGACGTCTGCT +
Preference number: 5 (lower is better)
Translates to: LTRSQSPGFWNACPR*AAPGSHQAGEGTSA
Trigger: AGCAGACGTCCCCTCTCCCGCCTGGTGGCTCCCGGGAGCTGCTCACCTGGGGCAGGCATTCCAGAAGCCCGGCGACTGACTCCTGGTTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CCA 90 bp GGGTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTaGCCGTGGGAGGGTCTGTGCTGCTCAGGAGATGGGGCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: GCGRVWGRLCRFTMR*PWEGLCCSGDGAVP
Trigger: GGGAACAGCCCCATCTCCTGAGCAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp GAGGAGGGTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCAGCTGCCTCAAGCCTaGGTCGGCCAGGCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: EEGVVGCGGGCAGSPCGGQLPQA*VGQAFQ
Trigger: CTGGAAGGCCTGGCCGACCAAGGCTTGAGGCAGCTG...GCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACACCCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS GCA 90 bp CTATGCTTGCGGGGTCCTCTTCCCACTCCCAGGCATGTAGCGACATaGTGCAGAGCGCACTGCTGGCCGCCGGCGCTCCTGCGAGCGGAT +
Preference number: 5 (lower is better)
Translates to: LCLRGPLPTPRHVAT*CRAHCWPPALLRAD
Trigger: ATCCGCTCGCAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCATGTCGCTACATGCCTGGGAGTGGGAAGAGGACCCCGCAAGCATAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000645291.2
CDS GCA 90 bp TGCTTGCGGGGTCCTCTTCCCACTCCCAGGCATGTAGCGACATGCTaGAGAGCGCACTGCTGGCCGCCGGCGCTCCTGGCAGGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: CLRGPLPTPRHVATC*RAHCWPPALLAGRK
Trigger: CTTTCTCCCTGCCAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCATGTCGCTACATGCCTGGGAGTGGGAAGAGGACCCCGCAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS GCA 90 bp CTATGCTTGCGGGGTCCTCTTCCCACTCCCAGGCATGTAGCGACATaGTGCAGAGCGCACTGCTGGCCGCCGGCGCTCCTGGCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: LCLRGPLPTPRHVAT*CRAHCWPPALLAGR
Trigger: TCTCCCTGCCAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCATGTCGCTACATGCCTGGGAGTGGGAAGAGGACCCCGCAAGCATAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CCA 90 bp CAGGGCAAGCAGTGGGTACCGGCAAGGAGCGGCATGACGGCCAGCTaGATGGAGAAAGCGCTCTGCTTCCTGGGGCCTGTCAGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: QGKQWVPARSGMTAS*MEKALCFLGPVSVG
Trigger: CCCCACGCTGACAGGCCCCAGGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGGTACCCACTGCTTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS CCA 90 bp GGAGCCCCCAAGGTCAGGATCAGCAGCTCTGGCCCCGGCCCTCAGTaGCACCGCGATGTCCACTCGCAACTTGAGCTGGGAGTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GAPKVRISSSGPGPQ*HRDVHSQLELGVSL
Trigger: GAGGCTGACTCCCAGCTCAAGTTGCGAGTGGACATCGCGGTGCCACTGAGGGCCGGGGCCAGAGCTGCTGATCCTGACCTTGGGGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGCACGACACCCAGGCTTaGTCACCTTCGTGCCACGGC +
Preference number: 5 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLHDTQA*SPSCHG
Trigger: GCCGTGGCACGAAGGTGACAAAGCCTGGGTGTCGTG...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS TCA 90 bp GCTGCTGGGAACAGGGCAAGCAGTGGGTACCGGCAAGGAGCGGCATaGCGGCCAGCTGGATGGAGAAAGCGCTCTGCTTCCTGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: AAGNRASSGYRQGAA*RPAGWRKRSASWGL
Trigger: CAGGCCCCAGGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGGTACCCACTGCTTGCCCTGTTCCCAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS GCA 90 bp CCGGCAAGGAGCGGCATGACGGCCAGCTGGATGGAGAAAGCGCTCTaGTTCCTGGGGCCTGTCAGCGTGGGGTCTGCCTCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: PARSGMTASWMEKAL*FLGPVSVGSASSSA
Trigger: GGCAGAAGAAGAGGCAGACCCCACGCTGACAGGCCCCAGGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265068.9
ENST00000515659.1
ENST00000645291.2
CDS-3UTR CAA 90 bp CGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGTGAGCCCAGCCCAGACGACTCACGACAGTTaGCCATCCGGCAAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: RSIRIGLRNHDHEVSPAQTTHDS*PSGKER
Trigger: CCGCTCCTTGCCGGATGGCAAACTGTCGTGAGTCGT...CTGGGCTGGGCTCACCTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCCGAGGGCCTTAGCGTaGATCATGGTGATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNPRALA*IMVMSC
Trigger: GCAGGACATCACCATGATCAACGCTAAGGCCCTCGG...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS GCA 90 bp ACGGCAAGGAGCGGCATGACGGCCAGCTGGATGGAGAAAGCGCTCTaGTTCCTGGGGCCTGTCAGCGTGGGGTCTGCCTCTTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: TARSGMTASWMEKAL*FLGPVSVGSASSSA
Trigger: GGCAGAAGAAGAGGCAGACCCCACGCTGACAGGCCCCAGGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CCA 90 bp GGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTaGGAGGGTCTGTGCTGCTCAGGAGATGGGGCTGTTCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: GRVWGRLCRFTMRWP*EGLCCSGDGAVPFL
Trigger: AAGAAAGGGAACAGCCCCATCTCCTGAGCAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS CCA 90 bp CTCACGACAGTTTGCCATCCGGCAAGGAGCGGCATGACGGCCAGCTaGATGGAGAAAGCGCTCTGCTTCCTGGGGCCTGTCAGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: LTTVCHPARSGMTAS*MEKALCFLGPVSVG
Trigger: CCCCACGCTGACAGGCCCCAGGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGGATGGCAAACTGTCGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS CCA 90 bp CAGTGTCTCGCAGGAAGAACACCGCCTGCTGCAGCAGCAGCTCCGTaGGCTGGAAGAGGTGCACGTGGTACAGGATGGCCTCCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: QCLAGRTPPAAAAAP*AGRGARGTGWPPGP
Trigger: GGGACCTGGAGGCCATCCTGTACCACGTGCACCTCTTCCAGCCCACGGAGCTGCTGCTGCAGCAGGCGGTGTTCTTCCTGCGAGACACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645291.2
ENST00000669741.1
CDS-3UTR CAA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGAGATGGGCTCTATGCTaGCGGGGTCCTCTTCCCACT +
Preference number: 5 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLRWALC*RGPLPT
Trigger: AGTGGGAAGAGGACCCCGCAAGCATAGAGCCCATCT...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGTTGCCCCTGGGCATaGGGCCGTGCTGGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: VANILINLYGMTAVLSRASCPWA*GRAGGH
Trigger: ATGGCCACCAGCACGGCCCAATGCCCAGGGGCAACT...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp GTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGACCTGGGAATCCAGCTTaGGTGGTTCTCCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: VWSGVGEAVQVHHAVAVGPGNPA*VVLPQL
Trigger: CAGCTGTGGGAGAACCACCAAAGCTGGATTCCCAGG...TCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS TCA 90 bp GACCACGTGGGGCACGTCGGAGCTGAAAGTGCTGGCAGGCTCAGATaGGGACTCGATGCTGCTGCACGGGCGGTCAGAGTCAGACTCCTG +
Preference number: 5 (lower is better)
Translates to: DHVGHVGAESAGRLR*GLDAAARAVRVRLL
Trigger: CAGGAGTCTGACTCTGACCGCCCGTGCAGCAGCATCGAGTCCTCATCTGAGCCTGCCAGCACTTTCAGCTCCGACGTGCCCCACGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265068.9
ENST00000511438.5
ENST00000645291.2
CDS TCA 90 bp ATCCAGGTGCTGCTGCTCCTGGACCCGCACACGCACCTTGAAGGCTaGCAGGATCTGCTGCAGGGTCCTGACAGGGTAGGAGTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: IQVLLLLDPHTHLEG*QDLLQGPDRVGVQA
Trigger: GGCCTGGACTCCTACCCTGTCAGGACCCTGCAGCAGATCCTGTCAGCCTTCAAGGTGCGTGTGCGGGTCCAGGAGCAGCAGCACCTGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS CCA 90 bp GATGAGGACTCGATGCTGCTGCACGGGCGGTCAGAGTCAGACTCCTaGGCCCTGGCCTTGGCCTTCAGGTGTTCCTCCACGTCACACTCG +
Preference number: 5 (lower is better)
Translates to: DEDSMLLHGRSESDS*ALALAFRCSSTSHS
Trigger: CGAGTGTGACGTGGAGGAACACCTGAAGGCCAAGGCCAGGGCCCAGGAGTCTGACTCTGACCGCCCGTGCAGCAGCATCGAGTCCTCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265068.9
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp GAACCACCCTTTGGTGATGGCCTCGGGTCCCCTTTGTCCTCACCCTGCAAGGAGCAGCTGCCTCAAGCCTaGGTCGGCCAGGCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: EPPFGDGLGSPLSSPCKEQLPQA*VGQAFQ
Trigger: CTGGAAGGCCTGGCCGACCAAGGCTTGAGGCAGCTG...CTCCTTGCAGGGTGAGGACAAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS GCA 90 bp GGAGCATCCGCTTATGGCCGTTCTGGCCACAAGACAAGCAGGAGCTaGTGGGAACAGGGCAAGCAGTGGGTACCGGCAAGGAGCGGCATG +
Preference number: 5 (lower is better)
Translates to: GASAYGRSGHKTSRS*WEQGKQWVPARSGM
Trigger: CATGCCGCTCCTTGCCGGTACCCACTGCTTGCCCTGTTCCCAGCAGCTCCTGCTTGTCTTGTGGCCAGAACGGCCATAAGCGGATGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS GCA 90 bp ACGTCTGCTCAGGCAGGCCTGCTGCGCCTAAGCACAAGATGCGTTTaGTATTTGGGGAGAGGCAAACCAGGCCGGGGGCAGCACGTGCAG +
Preference number: 5 (lower is better)
Translates to: TSAQAGLLRLSTRCV*YLGRGKPGRGQHVQ
Trigger: CTGCACGTGCTGCCCCCGGCCTGGTTTGCCTCTCCCCAAATAGCAAACGCATCTTGTGCTTAGGCGCAGCAGGCCTGCCTGAGCAGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS GCA 90 bp TTCCCGTCCAGCAGGTGGAAGCCAGTGAGCACATCCAGGTGCTGCTaGTCCTGGACCCGCACACGCACCTTGAAGGCTGACAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: FPSSRWKPVSTSRCC*SWTRTRTLKADRIC
Trigger: GCAGATCCTGTCAGCCTTCAAGGTGCGTGTGCGGGTCCAGGAGCAGCAGCACCTGGATGTGCTCACTGGCTTCCACCTGCTGGACGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS GCA 90 bp GTCTTCCCGTCCAGCAGGTGGAAGCCAGTGAGCACATCCAGGTGCTaGTGCTCCTGGACCCGCACACGCACCTTGAAGGCTGACAGGATC +
Preference number: 5 (lower is better)
Translates to: VFPSSRWKPVSTSRC*CSWTRTRTLKADRI
Trigger: GATCCTGTCAGCCTTCAAGGTGCGTGTGCGGGTCCAGGAGCAGCAGCACCTGGATGTGCTCACTGGCTTCCACCTGCTGGACGGGAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS GCA 90 bp TGTGTCTTCCCGTCCAGCAGGTGGAAGCCAGTGAGCACATCCAGGTaGTGCTGCTCCTGGACCCGCACACGCACCTTGAAGGCTGACAGG +
Preference number: 5 (lower is better)
Translates to: CVFPSSRWKPVSTSR*CCSWTRTRTLKADR
Trigger: CCTGTCAGCCTTCAAGGTGCGTGTGCGGGTCCAGGAGCAGCAGCACCTGGATGTGCTCACTGGCTTCCACCTGCTGGACGGGAAGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS CCA 90 bp GCATCCGCTTATGGCCGTTCTGGCCACAAGACAAGCAGGAGCTGCTaGGAACAGGGCAAGCAGTGGGTACCGGCAAGGAGCGGCATGACG +
Preference number: 5 (lower is better)
Translates to: ASAYGRSGHKTSRSC*EQGKQWVPARSGMT
Trigger: CGTCATGCCGCTCCTTGCCGGTACCCACTGCTTGCCCTGTTCCCAGCAGCTCCTGCTTGTCTTGTGGCCAGAACGGCCATAAGCGGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS CCA 90 bp TTCCCTTTCTTCTTCCTGACGGCAAGGAGCGGCATGACGGCCAGCTaGATGGAGAAAGCGCTCTGCTTCCTGGGGCCTGTCAGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: FPFFFLTARSGMTAS*MEKALCFLGPVSVG
Trigger: CCCCACGCTGACAGGCCCCAGGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGTCAGGAAGAAGAAAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CCA 90 bp TCCAGCAGGTGGAAGCCAGTGAGCACATCCAGGTGCTGCTGCTCCTaGACCCGCACACGCACCTTGAAGGCTGACAGGATCTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SSRWKPVSTSRCCCS*TRTRTLKADRICCR
Trigger: CCTGCAGCAGATCCTGTCAGCCTTCAAGGTGCGTGTGCGGGTCCAGGAGCAGCAGCACCTGGATGTGCTCACTGGCTTCCACCTGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGGCCGCTCCATCCGCATaGGGCTCCGCAACCACGACC +
Preference number: 5 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWAAPSA*GSATTT
Trigger: GGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGC...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGGCCAGATTCAAGTACTaGTGGCCAAGGAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLARFKY*WPRRRS
Trigger: TGACCTCCTCCTTGGCCACAAGTACTTGAATCTGGC...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCACCCGCACACGCACCTaGAAGGCTGACAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: ANILINLYGMTAVLSRASTRTRT*KADRIC
Trigger: GCAGATCCTGTCAGCCTTCAAGGTGCGTGTGCGGGT...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp AGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTCTTCGGCCTCGGGTCCCCTTaGTCCTCACCCTGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: SHSSNCGPGTCPQRAGLFGLGSP*SSPCKE
Trigger: CTCCTTGCAGGGTGAGGACAAAGGGGACCCGAGGCC...GAAGAGACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS GCA 90 bp AGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTaGTCAGGAGATGGGGCTGTTCCCTTTCTTCTTCCTGACGGCAAG +
Preference number: 5 (lower is better)
Translates to: RLCRFTMRWPWEGLC*SGDGAVPFLLPDGK
Trigger: CTTGCCGTCAGGAAGAAGAAAGGGAACAGCCCCATCTCCTGAGCAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CCA 90 bp TCTGGCCACAAGACAAGCAGGAGCTGCTGGGAACAGGGCAAGCAGTaGGTACCGGCAAGGAGCGGCATGACGGCCAGCTGGATGGAGAAA +
Preference number: 5 (lower is better)
Translates to: SGHKTSRSCWEQGKQ*VPARSGMTASWMEK
Trigger: TTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGGTACCCACTGCTTGCCCTGTTCCCAGCAGCTCCTGCTTGTCTTGTGGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp GCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCAGTGAGATGGTGAATTaGCAGGGGACCACGTGGGGC +
Preference number: 5 (lower is better)
Translates to: ANILINLYGMTAVLSRASSEMVN*QGTTWG
Trigger: GCCCCACGTGGTCCCCTGCAAATTCACCATCTCACT...GCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS GCA 90 bp CAGAGGAGGGCAGCAGGTCCCTCACCGTCACGTCCCAGAGGGTGGTaGTGTTATAGCAGATGTCGTGGATCCTGGCTAGAGCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: QRRAAGPSPSRPRGW*CYSRCRGSWLEPGR
Trigger: TCTTCCAGGCTCTAGCCAGGATCCACGACATCTGCTATAACAGCACCACCCTCTGGGACGTGACGGTGAGGGACCTGCTGCCCTCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS CCA 90 bp TGCTGTCCTGGCCGCAGTGTGTGGGCTGAACCTCACAGCTGTGGATaGGGACGGCCAGATTCAAGTACTTGTGGCCAAGGAGGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: CCPGRSVWAEPHSCG*GRPDSSTCGQGGGQ
Trigger: CTGACCTCCTCCTTGGCCACAAGTACTTGAATCTGGCCGTCCCCATCCACAGCTGTGAGGTTCAGCCCACACACTGCGGCCAGGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCACACGACACCCAGGCTTaGTCACCTTCGTGCCACGGC +
Preference number: 5 (lower is better)
Translates to: MWGTGLGSESPLGASVIPHDTQA*SPSCHG
Trigger: GCCGTGGCACGAAGGTGACAAAGCCTGGGTGTCGTG...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp TGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGGGGCATCCCAAACTCTaGGCTCAAGTCTTTTATCAT +
Preference number: 5 (lower is better)
Translates to: CCRGPAAPSALGSATTTTGHPKL*AQVFYH
Trigger: ATGATAAAAGACTTGAGCCAAGAGTTTGGGATGCCC...CGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGATCTGTGAGTTCTTCTaGCGAAAGGGGCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLICEFF*RKGHPK
Trigger: TTTGGGATGCCCCTTTCGCAAGAAGAACTCACAGAT...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCATGTCCACTCGCAACTaGAGCTGGGAGTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: VANILINLYGMTAVLSRAMSTRN*SWESAS
Trigger: AGAGGCTGACTCCCAGCTCAAGTTGCGAGTGGACAT...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp TGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAACAGCAGCTGTGAGTaGTACAGCACCTTGTATTTC +
Preference number: 5 (lower is better)
Translates to: CCRGPAAPSALGSATTTTNSSCE*YSTLYF
Trigger: GAAATACAAGGTGCTGTACAACTCACAGCTGCTGTT...CGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp AGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTCTTCCAGGCCAGCAGGCCTTaGCATTTCTCCAGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: SHSSNCGPGTCPQRAGLFQASRP*HFSSLP
Trigger: AGGGAGGCTGGAGAAATGCAAAGGCCTGCTGGCCTG...GAAGAGACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS TCA 90 bp TCCGCCACTGCAGGTACTTCTCCTGGTGGGCGTGGATCTCTAAGGTaGGGGTGGAGTTCCGACTGTGGTAGTCCTCAAGATTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: SATAGTSPGGRGSLR*GWSSDCGSPQDWGQ
Trigger: CTGCCCCCAATCTTGAGGACTACCACAGTCGGAACTCCACCCTCACCTTAGAGATCCACGCCCACCAGGAGAAGTACCTGCAGTGGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS TCA 90 bp CCCACAACCTTCCTTCTCCTGCTGTCCTGGCCGCAGTGTGTGGGCTaGACCTCACAGCTGTGGATGGGGACGGCCAGATTCAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: PTTFLLLLSWPQCVG*TSQLWMGTARFKYL
Trigger: CAAGTACTTGAATCTGGCCGTCCCCATCCACAGCTGTGAGGTTCAGCCCACACACTGCGGCCAGGACAGCAGGAGAAGGAAGGTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS GCA 90 bp AGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTaGTCAGGAGATGGGGCTGTTCCCTTTCTTCTTCCTGACTGTTAC +
Preference number: 5 (lower is better)
Translates to: RLCRFTMRWPWEGLC*SGDGAVPFLLPDCY
Trigger: GTAACAGTCAGGAAGAAGAAAGGGAACAGCCCCATCTCCTGAGCAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS CCA 90 bp CTGGGAATCCAGCTTTGGTGGTTCTCCCACAGCTGCCTCAAGCCTTaGTCGGCCAGGCCTTCCAGGATGAAAAGGTGTGTCTTCCCGTCC +
Preference number: 5 (lower is better)
Translates to: LGIQLWWFSHSCLKP*SARPSRMKRCVFPS
Trigger: GGACGGGAAGACACACCTTTTCATCCTGGAAGGCCTGGCCGACCAAGGCTTGAGGCAGCTGTGGGAGAACCACCAAAGCTGGATTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp AAACAAGTCCCGGGCCAGGTGTGCACAGCCATCTGCACAGGCTGTGAACAGAGGAGTGAGATGGTGAATTaGCAGGGGACCACGTGGGGC +
Preference number: 5 (lower is better)
Translates to: KQVPGQVCTAICTGCEQRSEMVN*QGTTWG
Trigger: GCCCCACGTGGTCCCCTGCAAATTCACCATCTCACT...CCTCTGTTCACAGCCTGTGCAGATGGCTGTGCACACCTGGCCCGGGACTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGTGCTTGGTGAGAACCTaGCAAAGACTTTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLCLVRT*QRLWVF
Trigger: AAACACCCAAAGTCTTTGCAAGGTTCTCACCAAGCA...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCATGAGGGCCTGGAAGTaGAGGTATGAATCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: VANILINLYGMTAVLSRAMRAWK*RYESRG
Trigger: CCCTCTGGATTCATACCTCAACTTCCAGGCCCTCAT...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp CGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGGTGAGCCCAGCCCAGAAAGGTGGTGGTTTCTaGTACAGATCAAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: RSIRIGLRNHDHEVSPAQKGGGF*YRSKST
Trigger: CGTGGACTTTGATCTGTACAAGAAACCACCACCTTT...CTGGGCTGGGCTCACCTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp AGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTCTTCCCTGGGAATCCAGCTTaGGTGGTTCTCCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: SHSSNCGPGTCPQRAGLFPGNPA*VVLPQL
Trigger: CAGCTGTGGGAGAACCACCAAAGCTGGATTCCCAGG...GAAGAGACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp GAACCACCCTTTGGTGATGGCCTCGGGTCCCCTTTGTCCTCACCCTGCAAGGAGATCAGGAGGCCCAGCTaGGCAAACCCTTGCCTGTTA +
Preference number: 5 (lower is better)
Translates to: EPPFGDGLGSPLSSPCKEIRRPS*ANPCLL
Trigger: TAACAGGCAAGGGTTTGCCAAGCTGGGCCTCCTGAT...CTCCTTGCAGGGTGAGGACAAAGGGGACCCGAGGCCATCACCAAAGGGTGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS GCA 90 bp GGTGCACGTGGTACAGGATGGCCTCCAGGTCCCCATAGAGCCGGCTaGGGAACAGCAGCTGTGAGTTGTACAGCACCTTGTATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: GARGTGWPPGPHRAG*GTAAVSCTAPCISC
Trigger: ACAGGAAATACAAGGTGCTGTACAACTCACAGCTGCTGTTCCGCAGCCGGCTCTATGGGGACCTGGAGGCCATCCTGTACCACGTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645291.2
ENST00000669741.1
CDS-3UTR CAA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGAGATGGGCTCTATGCTaGCGGGGTCCTCTTCCCACT +
Preference number: 5 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWRWALC*RGPLPT
Trigger: AGTGGGAAGAGGACCCCGCAAGCATAGAGCCCATCT...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGCACGACACCCAGGCTTaGTCACCTTCGTGCCACGGC +
Preference number: 5 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMHDTQA*SPSCHG
Trigger: GCCGTGGCACGAAGGTGACAAAGCCTGGGTGTCGTG...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp GTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTGGAAGAATCGTCCATTTaGAGGGACTTCTCATATTCC +
Preference number: 5 (lower is better)
Translates to: VGEAVQVHHAVAVGGSVLEESSI*RDFSYS
Trigger: GGAATATGAGAAGTCCCTCAAAATGGACGATTCTTC...CAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp ATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACAAATGGTTGGTGTTCTaGAAACACTCCATTGAATCG +
Preference number: 5 (lower is better)
Translates to: MTAVLSRASRSIRIGLRNKWLVF*KHSIES
Trigger: CGATTCAATGGAGTGTTTCAAGAACACCAACCATTT...GTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp CTGTCGCGGGCCAGCCGCTCCATCCGCATTGGGCTCCGCAACCACGACCACGAGCTCTCAATTAATTCCTaGATCTCCATCATGCTTGCT +
Preference number: 5 (lower is better)
Translates to: LSRASRSIRIGLRNHDHELSINS*ISIMLA
Trigger: AGCAAGCATGATGGAGATCAAGGAATTAATTGAGAG...CTCGTGGTCGTGGTTGCGGAGCCCAATGCGGATGGAGCGGCTGGCCCGCGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp TGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGGCAGAGGCGGGAGGCTaGCTTCAGGCTGGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: WAFVSPCTMKPIPLSFLRAEAGG*LQAGVS
Trigger: GCTCACTCCAGCCTGAAGCAAGCCTCCCGCCTCTGC...CCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp GAGGAGGGTGTGGTCGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCTGCACTTTAATGAAGTaGATTGTTGAGGAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: EEGVVGCGGGCAGSPCGGCTLMK*IVEEGV
Trigger: CACACCCTCCTCAACAATCAACTTCATTAAAGTGCA...GCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCGACCACACCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp GTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGGCAGGAAGCACACTaGATCTTTATGGTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: VANILINLYGMTAVLSRARQEAH*IFMVRG
Trigger: TCCCCTGACCATAAAGATCAAGTGTGCTTCCTGCCT...GGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS GCA 90 bp CTGTGTTCTGACCTGGGAATCCAGCTTTGGTGGTTCTCCCACAGCTaGCTCAAGCCTTGGTCGGCCAGGCCTTCCAGGATGAAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: LCSDLGIQLWWFSHS*LKPWSARPSRMKRC
Trigger: ACACCTTTTCATCCTGGAAGGCCTGGCCGACCAAGGCTTGAGGCAGCTGTGGGAGAACCACCAAAGCTGGATTCCCAGGTCAGAACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp GGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGGACTCCAGGAATACTTaGGCCACCATTGGAAATAGC +
Preference number: 5 (lower is better)
Translates to: GQHPHQPVWHDGRAVAGQDSRNT*ATIGNS
Trigger: GCTATTTCCAATGGTGGCCAAAGTATTCCTGGAGTC...CTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATGAAGAATCGTCCATTTaGAGGGACTTCTCATATTCC +
Preference number: 5 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHEESSI*RDFSYS
Trigger: GGAATATGAGAAGTCCCTCAAAATGGACGATTCTTC...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp ACAGCTCCTGGGGGTAGCCCTCATGCTCCCGCAGGATCCTCTTTAACAAAGCTGCCACCACACCACAGGTaGGCTGAGTGGGTCAGAATT +
Preference number: 5 (lower is better)
Translates to: TAPGGSPHAPAGSSLTKLPPHHR*AEWVRI
Trigger: AATTCTGACCCACTCAGCCAACCTGTGGTGTGGTGG...CAGCTTTGTTAAAGAGGATCCTGCGGGAGCATGAGGGCTACCCCCAGGAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp CAACCTGTATGGCATGACGGCCGTGCTGTCGCGGGCCAGCCGCTCCATCCGCATTGCACTTTAATGAAGTaGATTGTTGAGGAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: QPVWHDGRAVAGQPLHPHCTLMK*IVEEGV
Trigger: CACACCCTCCTCAACAATCAACTTCATTAAAGTGCA...ATGCGGATGGAGCGGCTGGCCCGCGACAGCACGGCCGTCATGCCATACAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTCTGAAGACCTGTCACTaGGAATCCCCTGGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRALKTCH*ESPGCE
Trigger: CTCACAGCCAGGGGATTCCAAGTGACAGGTCTTCAG...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp GGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCCTCTGCCCCCAGCTCTaGGCTGGACACCTAGAGATC +
Preference number: 5 (lower is better)
Translates to: GKVVVSCTDQSPRGACPSLCPQL*AGHLEI
Trigger: GATCTCTAGGTGTCCAGCCAAGAGCTGGGGGCAGAG...GCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp TGTGGTCCTTGGGTGGTCTGGAGCTCTAAAATGCCTATTGTGGACACTCCCTTGCCTGAGAACCACCCTTaGGTGATGGCCTCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: CGPWVVWSSKMPIVDTPLPENHP*VMASGP
Trigger: GGGACCCGAGGCCATCACCAAAGGGTGGTTCTCAGG...CAAGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGACCACCCAAGGACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS GCA 90 bp AAATCAGGAGGAGAAAGGTCCCTATGGACACCCCACCTGAGACCCTaGTCTTCCCTGTGGACCTCATTCAGCTCTTTGATGGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: KSGGERSLWTPHLRP*SSLWTSFSSLMGGS
Trigger: GCTGCCACCCATCAAAGAGCTGAATGAGGTCCACAGGGAAGAGCAGGGTCTCAGGTGGGGTGTCCATAGGGACCTTTCTCCTCCTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp GACCCGTTCTCTGTCGATGACCATAGGCTATGTCATGGGTATAATGGAGCGGCCAGATGGGCTCTATGCTaGCGGGGTCCTCTTCCCACT +
Preference number: 5 (lower is better)
Translates to: DPFSVDDHRLCHGYNGAARWALC*RGPLPT
Trigger: AGTGGGAAGAGGACCCCGCAAGCATAGAGCCCATCT...GGCCGCTCCATTATACCCATGACATAGCCTATGGTCATCGACAGAGAACGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGTGGCACGCAGCAGGGTaGTCATTAGGAGCATCCGCT +
Preference number: 5 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMWHAAG*SLGASA
Trigger: AGCGGATGCTCCTAATGACAACCCTGCTGCGTGCCA...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCAGATGCGTTTGCTATTaGGGGAGAGGCAAACCAGGC +
Preference number: 5 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGRCVCY*GRGKPG
Trigger: GCCTGGTTTGCCTCTCCCCAAATAGCAAACGCATCT...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR CAA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCTGGGACTCAAAGGGGTaGTTCTCTGTCTCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGWDSKG*FSVSLG
Trigger: TCCCAGAGAGACAGAGAACAACCCCTTTGAGTCCCA...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp TGCAGCCTTCTGGAAGGGGGCTTCACTCTAGGCTGGTGGCGTGTAAGGCCTCAGATCTGTGAGTTCTTCTaGCGAAAGGGGCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: CSLLEGGFTLGWWRVRPQICEFF*RKGHPK
Trigger: TTTGGGATGCCCCTTTCGCAAGAAGAACTCACAGAT...CTGAGGCCTTACACGCCACCAGCCTAGAGTGAAGCCCCCTTCCAGAAGGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp GATACCACTGAAGATGCAGAGTGGCACAGAGCTCCTGCCTGCCCACGGCATCAGCTCCTTGGCTATCTCTaGATACAGCTCCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: DTTEDAEWHRAPACPRHQLLGYL*IQLLLG
Trigger: GCCAAGAAGGAGCTGTATCAAGAGATAGCCAAGGAG...CTGATGCCGTGGGCAGGCAGGAGCTCTGTGCCACTCTGCATCTTCAGTGGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS CCA 90 bp AAAATAGCAGAAGCAGGAGGAGAGCCGGCTGGAATACACCTACCCTaGCCGGAAGACATGAAGATGAGAAAGAGGCCATCCGGGTACAGC +
Preference number: 5 (lower is better)
Translates to: KIAEAGGEPAGIHLP*PEDMKMRKRPSGYS
Trigger: GCTGTACCCGGATGGCCTCTTTCTCATCTTCATGTCTTCCGGCCAGGGTAGGTGTATTCCAGCCGGCTCTCCTCCTGCTTCTGCTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515659.1
CDS CCA 90 bp CCGAGGGCCTTAGCGTTGATCATGGTGATGTCCTGCAGCAGGCTGTaGAGCAGGGAGACCTTCTTAAAGTCAAAGACGAAGATGATGCGG +
Preference number: 5 (lower is better)
Translates to: PRALALIMVMSCSRL*SRETFLKSKTKMMR
Trigger: CCGCATCATCTTCGTCTTTGACTTTAAGAAGGTCTCCCTGCTCCACAGCCTGCTGCAGGACATCACCATGATCAACGCTAAGGCCCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGTGGCACGCAGCAGGGTaGTCATTAGGAGCATCCGCT +
Preference number: 5 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWWHAAG*SLGASA
Trigger: AGCGGATGCTCCTAATGACAACCCTGCTGCGTGCCA...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp GAGCTGACCCGTTCTCTGTCGATGACCATAGGCTATGTCATGGGTATAATGGAGATGCAGGAGAATCGCTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: ELTRSLSMTIGYVMGIMEMQENR*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCAT...CTCCATTATACCCATGACATAGCCTATGGTCATCGACAGAGAACGGGTCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp TGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACAAGCACAAGATGCGTTaGCTATTTGGGGAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: WGTGLGSESPLGASVIPDKHKMR*LFGERQ
Trigger: TTGCCTCTCCCCAAATAGCAAACGCATCTTGTGCTT...GTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS-3UTR CAA 90 bp TGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACTTATGGAACTGGTACTaGCAGTACACAGGCATGCAC +
Preference number: 5 (lower is better)
Translates to: WGTGLGSESPLGASVIPDLWNWY*QYTGMH
Trigger: GTGCATGCCTGTGTACTGCAAGTACCAGTTCCATAA...GTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp AGTCCACGTGGTGCCTGTCCCAGCTCCACCTGTCTCGATCCAACACAGGCTCCAGGGCATCCCAAACTCTaGGCTCAAGTCTTTTATCAT +
Preference number: 5 (lower is better)
Translates to: SPRGACPSSTCLDPTQAPGHPKL*AQVFYH
Trigger: ATGATAAAAGACTTGAGCCAAGAGTTTGGGATGCCC...TGGAGCCTGTGTTGGATCGAGACAGGTGGAGCTGGGACAGGCACCACGTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp TCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAGCAGCTGGTACTCTCCTTGGCTATCTCTaGATACAGCTCCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: SPLGASVIPDHHGGAAGTLLGYL*IQLLLG
Trigger: GCCAAGAAGGAGCTGTATCAAGAGATAGCCAAGGAG...AGTACCAGCTGCTCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS TCA 90 bp CGGCCAGATTCAAGTACTTGTGGCCAAGGAGGAGGTCAGCAAAACTaGCCTGGGCGATGCCATAAGGGTACCACATCTTGTTCTGGGACT +
Preference number: 5 (lower is better)
Translates to: RPDSSTCGQGGGQQN*PGRCHKGTTSCSGT
Trigger: AGTCCCAGAACAAGATGTGGTACCCTTATGGCATCGCCCAGGTCAGTTTTGCTGACCTCCTCCTTGGCCACAAGTACTTGAATCTGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511204.1
ENST00000645291.2
CDS GCA 90 bp CCTTCTGACCCCACTTTTCTGCTCCACCGCCACATCATCGCGTCTTaGCCCTTTAACCTAGGAATTGCACCTGTCTGGGTAGTCTCACAT +
Preference number: 5 (lower is better)
Translates to: PSDPTFLLHRHIIAS*PFNLGIAPVWVVSH
Trigger: ATGTGAGACTACCCAGACAGGTGCAATTCCTAGGTTAAAGGGGCAAGACGCGATGATGTGGCGGTGGAGCAGAAAAGTGGGGTCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510149.1
CDS-3UTR CAA 90 bp CACAGCCTCCACACTGCTGACAGTTGGGGCAGACCATTCTTTGCTCAGGGGACAGACTCCAGGAATACTTaGGCCACCATTGGAAATAGC +
Preference number: 5 (lower is better)
Translates to: HSLHTADSWGRPFFAQGTDSRNT*ATIGNS
Trigger: GCTATTTCCAATGGTGGCCAAAGTATTCCTGGAGTC...TGTCCCCTGAGCAAAGAATGGTCTGCCCCAACTGTCAGCAGTGTGGAGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp ACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCGTGCTGACTCCAGGAATACTTaGGCCACCATTGGAAATAGC +
Preference number: 5 (lower is better)
Translates to: TEAGGQHPHQPVWHDGRADSRNT*ATIGNS
Trigger: GCTATTTCCAATGGTGGCCAAAGTATTCCTGGAGTC...AGCACGGCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCCACGACACCCAGGCTTaGTCACCTTCGTGCCACGGC +
Preference number: 5 (lower is better)
Translates to: NQTELGSSPGFTFPSCVIHDTQA*SPSCHG
Trigger: GCCGTGGCACGAAGGTGACAAAGCCTGGGTGTCGTG...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAAGTTTCGGGCTCTGCTaGGTGAGAACCTTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: LGSESPLGASVIPDHHGGSFGLC*VRTLQR
Trigger: TCTTTGCAAGGTTCTCACCAAGCAGAGCCCGAAACT...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp AAACAAGTCCCGGGCCAGGTGTGCACAGCCATCTGCACAGGCTGTGAACAGAGGCTGCCAAAGAAATGGTaGGTGTTCTTGAAACACTCC +
Preference number: 5 (lower is better)
Translates to: KQVPGQVCTAICTGCEQRLPKKW*VFLKHS
Trigger: GGAGTGTTTCAAGAACACCAACCATTTCTTTGGCAG...CCTCTGTTCACAGCCTGTGCAGATGGCTGTGCACACCTGGCCCGGGACTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp GGCTGGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAGTTCCAGCTTGGCAAACCCTaGCCTGTTACCTGTTACAGG +
Preference number: 5 (lower is better)
Translates to: GWWRVRPQSYMPMENGKFQLGKP*PVTCYR
Trigger: CCTGTAACAGGTAACAGGCAAGGGTTTGCCAAGCTG...GAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp TGTGGTCCTTGGGTGGTCTGGAGCTCTAAAATGCCTATTGTGGACACTCCCTTGCTAGCTGGAGCCTCCTaGAGAGCCACAGCAGTAACT +
Preference number: 5 (lower is better)
Translates to: CGPWVVWSSKMPIVDTPLLAGAS*RATAVT
Trigger: AGTTACTGCTGTGGCTCTCAAGGAGGCTCCAGCTAG...CAAGGGAGTGTCCACAATAGGCATTTTAGAGCTCCAGACCACCCAAGGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp AGCCACAGCAGTAACTGTGGGCCTGGGACATGCCCACAGAGAGCAGGTCTCTTCCTTTTCTTAAACATGTaGTGGGAAGAGGAGACCCCA +
Preference number: 5 (lower is better)
Translates to: SHSSNCGPGTCPQRAGLFLFLNM*WEEETP
Trigger: TGGGGTCTCCTCTTCCCACAACATGTTTAAGAAAAG...GAAGAGACCTGCTCTCTGTGGGCATGTCCCAGGCCCACAGTTACTGCTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS TCA 90 bp GATTGGGGGCAGGCTGAGGTGGTAGGGCAAACAGTTTCTCATCTGTaGGTTCTTCTTGCGAAAGGGGCATCCCAAACTCTTGGCTCAAGT +
Preference number: 5 (lower is better)
Translates to: DWGQAEVVGQTVSHL*VLLAKGASQTLGSS
Trigger: ACTTGAGCCAAGAGTTTGGGATGCCCCTTTCGCAAGAAGAACTCACAGATGAGAAACTGTTTGCCCTACCACCTCAGCCTGCCCCCAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS GCA 90 bp CTGTGCTTTTTGTCTTTGTTCTTCATAAGCATGGCACTCCGCCACTaGAGGTACTTCTCCTGGTGGGCGTGGATCTCTAAGGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: LCFLSLFFISMALRH*RYFSWWAWISKVRV
Trigger: CACCCTCACCTTAGAGATCCACGCCCACCAGGAGAAGTACCTGCAGTGGCGGAGTGCCATGCTTATGAAGAACAAAGACAAAAAGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS-3UTR CAA 90 bp ATGTGGGGGACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCATGCTTGGTGAGAACCTaGCAAAGACTTTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: MWGTGLGSESPLGASVIPCLVRT*QRLWVF
Trigger: AAACACCCAAAGTCTTTGCAAGGTTCTCACCAAGCA...TGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGTCCCCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATAGTTTCGGGCTCTGCTaGGTGAGAACCTTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: TGLGSESPLGASVIPDHHSFGLC*VRTLQR
Trigger: TCTTTGCAAGGTTCTCACCAAGCAGAGCCCGAAACT...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCCTGCCAAAGAAATGGTaGGTGTTCTTGAAACACTCC +
Preference number: 5 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGLPKKW*VFLKHS
Trigger: GGAGTGTTTCAAGAACACCAACCATTTCTTTGGCAG...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGCACTGTACAGCATaGTACATGACGGGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWLHCTA*YMTGQV
Trigger: AACCTGCCCCGTCATGTACAATGCTGTACAGTGCAG...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCGCTGAGATCGCGCCATaGTACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: NQTELGSSPGFTFPSCVIAEIAP*YSSLGN
Trigger: GTTGCCCAGGCTGGAGTACAATGGCGCGATCTCAGC...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATTCCTCATTCAGCTCTTaGATGGGTGGCAGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: TGLGSESPLGASVIPDHHSSFSS*MGGSLR
Trigger: TCTCAAGCTGCCACCCATCAAAGAGCTGAATGAGGA...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGAGGCAATCTAAAATGTaGGCAGACTTCTCACTGCCA +
Preference number: 5 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWRQSKM*ADFSLP
Trigger: TGGCAGTGAGAAGTCTGCCAACATTTTAGATTGCCT...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp GCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGACGGCGAGTTGTACAGCACCTaGTATTTCCTGTGTTCTGAC +
Preference number: 5 (lower is better)
Translates to: AGTEAGGQHPHQPVWHDGELYST*YFLCSD
Trigger: GTCAGAACACAGGAAATACAAGGTGCTGTACAACTC...GCCGTCATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS-3UTR CAA 90 bp CTTCTTACCAAGGAAAAGCCTTGTGTTCTTAGGCTAGACAGCTCTCCTAGCTGGTACCTGTTACAGGCTTaGGTGCGGGCGAAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LLTKEKPCVLRLDSSPSWYLLQA*VRAKGA
Trigger: TGCTCCCTTCGCCCGCACCAAAGCCTGTAACAGGTA...CCAGCTAGGAGAGCTGTCTAGCCTAAGAACACAAGGCTTTTCCTTGGTAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS TCA 90 bp CATGGTCTGGGTACTATAGTTGTAGACGGCCTTGTTGGCAGGGGCTaGAATTTTAATCACCTTCGCCACGGACTTCGGAGGCTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: HGLGTIVVDGLVGRG*NFNHLRHGLRRLLA
Trigger: AGCAAGAAGCCTCCGAAGTCCGTGGCGAAGGTGATTAAAATTTCAGCCCCTGCCAACAAGGCCGTCTACAACTATAGTACCCAGACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS CCA 90 bp GAAATAAACGTGGGTTCCATGGGGCTCCCCCTTGGTCTTGTGAACTaGAGTCTTATGGAACTGGTACTTGCAGTACACAGGCATGCACAG +
Preference number: 5 (lower is better)
Translates to: EINVGSMGLPLGLVN*SLMELVLAVHRHAQ
Trigger: CTGTGCATGCCTGTGTACTGCAAGTACCAGTTCCATAAGACTCCAGTTCACAAGACCAAGGGGGAGCCCCATGGAACCCACGTTTATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511204.1
ENST00000645291.2
CDS-3UTR CAA 90 bp GAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGCTGCCAAAGAAATGGTaGGTGTTCTTGAAACACTCC +
Preference number: 5 (lower is better)
Translates to: EQLVLKRVANILINLYGMLPKKW*VFLKHS
Trigger: GGAGTGTTTCAAGAACACCAACCATTTCTTTGGCAG...CATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp CTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTCCTGCCCCCAAAACATaGCTCTTAACTCCACTGCCT +
Preference number: 5 (lower is better)
Translates to: LCFPLYYEANSPEFPEVAPAPKT*LLTPLP
Trigger: AGGCAGTGGAGTTAAGAGCAATGTTTTGGGGGCAGG...AGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp TGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGGCACCAAGGCGTTCATaGAAACAGCATGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: WAFVSPCTMKPIPLSFLRAPRRS*KQHVAP
Trigger: TGGAGCAACATGCTGTTTCAATGAACGCCTTGGTGC...CCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515659.1
CDS-3UTR CAA 90 bp CCAGCTCTTGGCTGGACACCTAGAGATCAGTCATGGGTAATAGTGTTGAAGCTCTGGAGCTGTGATCAGTaGTCCTTAGGAGTCGAGGAG +
Preference number: 5 (lower is better)
Translates to: PALGWTPRDQSWVIVLKLWSCDQ*SLGVEE
Trigger: CTCCTCGACTCCTAAGGACAACTGATCACAGCTCCA...GAGCTTCAACACTATTACCCATGACTGATCTCTAGGTGTCCAGCCAAGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS CCA 90 bp TTCTCATCTGTGAGTTCTTCTTGCGAAAGGGGCATCCCAAACTCTTaGCTCAAGTCTTTTATCATAGCAGAGGAGGGCAGCAGGTCCCTC +
Preference number: 5 (lower is better)
Translates to: FSSVSSSCERGIPNS*LKSFIIAEEGSRSL
Trigger: GAGGGACCTGCTGCCCTCCTCTGCTATGATAAAAGACTTGAGCCAAGAGTTTGGGATGCCCCTTTCGCAAGAAGAACTCACAGATGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS-3UTR CAA 90 bp CCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATGTGCTTGGTGAGAACCTaGCAAAGACTTTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: PLYYEANSPEFPEVAVRMCLVRT*QRLWVF
Trigger: AAACACCCAAAGTCTTTGCAAGGTTCTCACCAAGCA...CATCCTCACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp GGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCTCTCAATTAATTCCTaGATCTCCATCATGCTTGCT +
Preference number: 5 (lower is better)
Translates to: GGAAGTEAGGQHPHQPVWLSINS*ISIMLA
Trigger: AGCAAGCATGATGGAGATCAAGGAATTAATTGAGAG...CCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp GCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGAGGCTTCCTTGGATTTaGGAATCAAACAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: AFVSPCTMKPIPLSFLRWRLPWI*ESNRAG
Trigger: CCCAGCTCTGTTTGATTCCAAAATCCAAGGAAGCCT...CCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp TGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGAGGATTGACCTGGGTTaGAATCCCAGATCTGACTCT +
Preference number: 5 (lower is better)
Translates to: CFPLYYEANSPEFPEVAVRIDLG*NPRSDS
Trigger: AGAGTCAGATCTGGGATTCAAACCCAGGTCAATCCT...CACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp CATGTTGTGGGAAGAGGAGACCCCAGCAAGTGTTTCTTAAGTGATTTCACCAGTCTGAAGACCTGTCACTaGGAATCCCCTGGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: HVVGRGDPSKCFLSDFTSLKTCH*ESPGCE
Trigger: CTCACAGCCAGGGGATTCCAAGTGACAGGTCTTCAG...ACTGGTGAAATCACTTAAGAAACACTTGCTGGGGTCTCCTCTTCCCACAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp GGCTGGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAGTTCAAAGGTGGTGGTTTCTaGTACAGATCAAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: GWWRVRPQSYMPMENGKFKGGGF*YRSKST
Trigger: CGTGGACTTTGATCTGTACAAGAAACCACCACCTTT...GAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp GGAAAGGTGGTGGTTTCTTGTACAGATCAAAGTCCACGTGGTGCCTGTCCCAGCAACAGCAGCTGTGAGTaGTACAGCACCTTGTATTTC +
Preference number: 5 (lower is better)
Translates to: GKVVVSCTDQSPRGACPSNSSCE*YSTLYF
Trigger: GAAATACAAGGTGCTGTACAACTCACAGCTGCTGTT...GCTGGGACAGGCACCACGTGGACTTTGATCTGTACAAGAAACCACCACCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp CAGGCCACAATCCCTTGGGGTTATGAGCCCTTAGTTTTTATCCTTCTCAGGAGACCCTTCTGCTGGCACTaGAAAGATTACACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: QATIPWGYEPLVFILLRRPFCWH*KDYTRS
Trigger: GGACCTGGTGTAATCTTTCAAGTGCCAGCAGAAGGG...TCTCCTGAGAAGGATAAAAACTAAGGGCTCATAACCCCAAGGGATTGTGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp CTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGACTCCAGGAATACTTaGGCCACCATTGGAAATAGC +
Preference number: 5 (lower is better)
Translates to: LCFPLYYEANSPEFPEVADSRNT*ATIGNS
Trigger: GCTATTTCCAATGGTGGCCAAAGTATTCCTGGAGTC...AGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp CTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATGGAGGAAAATGGTTGGTGTTCTaGAAACACTCCATTGAATCG +
Preference number: 5 (lower is better)
Translates to: LGSESPLGASVIPDHHGGKWLVF*KHSIES
Trigger: CGATTCAATGGAGTGTTTCAAGAACACCAACCATTT...TCCTCCATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp CCTCTCTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGCCAAAGAAATGGTaGGTGTTCTTGAAACACTCC +
Preference number: 5 (lower is better)
Translates to: PLWAFVSPCTMKPIPLSFLPKKW*VFLKHS
Trigger: GGAGTGTTTCAAGAACACCAACCATTTCTTTGGCAG...GAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp CGAGAAAGTGAAGGTGATCAGGAAGGACAAGCTGTAGGTGAAGTATCATTTTCAGGGGCAGACCATTCTTaGCTCAGGGGACAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: RESEGDQEGQAVGEVSFSGADHS*LRGQSC
Trigger: ACAGGACTGTCCCCTGAGCAAAGAATGGTCTGCCCC...TGAAAATGATACTTCACCTACAGCTTGTCCTTCCTGATCACCTTCACTTTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTACCTCATTCAGCTCTTaGATGGGTGGCAGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFTSFSS*MGGSLR
Trigger: TCTCAAGCTGCCACCCATCAAAGAGCTGAATGAGGT...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp GGCTGGTGGCGTGTAAGGCCTCAGTCTTACATGCCAATGGAGAATGGCAAGTTCTTTCTCTGGCAGACCTaGTTTTTAGATAGGCTCATG +
Preference number: 5 (lower is better)
Translates to: GWWRVRPQSYMPMENGKFFLWQT*FLDRLM
Trigger: CATGAGCCTATCTAAAAACAAGGTCTGCCAGAGAAA...GAACTTGCCATTCTCCATTGGCATGTAAGACTGAGGCCTTACACGCCACCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp CTTCCCCACTTTATAGCCAAGAAACCAGACCCAGGGCATGAAGGGATTTGCCTCGACATTTCAGCAAACTaGTTAGCACTTCCATGGAGC +
Preference number: 5 (lower is better)
Translates to: LPHFIAKKPDPGHEGICLDISAN*LALPWS
Trigger: GCTCCATGGAAGTGCTAACAAGTTTGCTGAAATGTC...GAGGCAAATCCCTTCATGCCCTGGGTCTGGTTTCTTGGCTATAAAGTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp GAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATGGCATGATACTTTGGCCACCATaGGAAATAGCAATATGTCAA +
Preference number: 5 (lower is better)
Translates to: EQLVLKRVANILINLYGMILWPP*EIAICQ
Trigger: TTGACATATTGCTATTTCCAATGGTGGCCAAAGTAT...CATGCCATACAGGTTGATGAGGATGTTGGCCACCCGCTTCAGTACCAGCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCAGTTTCGGGCTCTGCTaGGTGAGAACCTTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: NQTELGSSPGFTFPSCVISFGLC*VRTLQR
Trigger: TCTTTGCAAGGTTCTCACCAAGCAGAGCCCGAAACT...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp CTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGAAGAATCGTCCATTTaGAGGGACTTCTCATATTCC +
Preference number: 5 (lower is better)
Translates to: LGLCFPLYYEANSPEFPEEESSI*RDFSYS
Trigger: GGAATATGAGAAGTCCCTCAAAATGGACGATTCTTC...CTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp CAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCACTTTCTCAAACTGAATaGACACCAACCCAAGAGCGC +
Preference number: 5 (lower is better)
Translates to: QTELGSSPGFTFPSCVISLSQTE*TPTQER
Trigger: GCGCTCTTGGGTTGGTGTCAATTCAGTTTGAGAAAG...TGAGATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp CATGTTGTGGGAAGAGGAGACCCCAGCAAGTGTTTCTTAAGTGATTTCACCAGTATTCATCCATCTGGGTaGAAAAGGCCTAGCGACCAG +
Preference number: 5 (lower is better)
Translates to: HVVGRGDPSKCFLSDFTSIHPSG*KRPSDQ
Trigger: CTGGTCGCTAGGCCTTTTCAACCCAGATGGATGAAT...ACTGGTGAAATCACTTAAGAAACACTTGCTGGGGTCTCCTCTTCCCACAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp CAGGCCACAATCCCTTGGGGTTATGAGCCCTTAGTTTTTATCCTTCTCAGGAGACTGCTTAGAGTTTCTTaGCACAGGAGAAGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: QATIPWGYEPLVFILLRRLLRVS*HRRSLG
Trigger: CCCCAAACTTCTCCTGTGCAAAGAAACTCTAAGCAG...TCTCCTGAGAAGGATAAAAACTAAGGGCTCATAACCCCAAGGGATTGTGGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS CCA 90 bp CACATCATCGCGTCTTGCCCCTTTAACCTAGGAATTGCACCTGTCTaGGTAGTCTCACATATTCCCTTTCAACAAGCATCTTTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: HIIASCPFNLGIAPV*VVSHIPFQQASFSL
Trigger: GAGAGAGAAAGATGCTTGTTGAAAGGGAATATGTGAGACTACCCAGACAGGTGCAATTCCTAGGTTAAAGGGGCAAGACGCGATGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510149.1
CDS-3UTR CAA 90 bp AACTATGATAACCACCACAGCCACCACCACACCACAGGTTGGCTGAGTGGGTCAATACTTTGGCCACCATaGGAAATAGCAATATGTCAA +
Preference number: 5 (lower is better)
Translates to: NYDNHHSHHHTTGWLSGSILWPP*EIAICQ
Trigger: TTGACATATTGCTATTTCCAATGGTGGCCAAAGTAT...TGACCCACTCAGCCAACCTGTGGTGTGGTGGTGGCTGTGGTGGTTATCATAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp ACTGGTCTAGGTAGTGAGTCCCCACTTGGAGCCTCTGTGATCCCAGACCATCATATACTTTGGCCACCATaGGAAATAGCAATATGTCAA +
Preference number: 5 (lower is better)
Translates to: TGLGSESPLGASVIPDHHILWPP*EIAICQ
Trigger: TTGACATATTGCTATTTCCAATGGTGGCCAAAGTAT...ATGATGGTCTGGGATCACAGAGGCTCCAAGTGGGGACTCACTACCTAGACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS-3UTR CAA 90 bp CTGGGCCTTTGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGAAATGGTTGGTGTTCTaGAAACACTCCATTGAATCG +
Preference number: 5 (lower is better)
Translates to: LGLCFPLYYEANSPEFPEKWLVF*KHSIES
Trigger: CGATTCAATGGAGTGTTTCAAGAACACCAACCATTT...CTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACAAAGGCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp TGTTTCCCCCTGTACTATGAAGCCAATTCCCCTGAGTTTCCTGAGGTGGCTGTGCTCTCAATTAATTCCTaGATCTCCATCATGCTTGCT +
Preference number: 5 (lower is better)
Translates to: CFPLYYEANSPEFPEVAVLSINS*ISIMLA
Trigger: AGCAAGCATGATGGAGATCAAGGAATTAATTGAGAG...CACAGCCACCTCAGGAAACTCAGGGGAATTGGCTTCATAGTACAGGGGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCAGGCTTCCTTGGATTTaGGAATCAAACAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: NQTELGSSPGFTFPSCVIRLPWI*ESNRAG
Trigger: CCCAGCTCTGTTTGATTCCAAAATCCAAGGAAGCCT...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp ATGGGGAGGCTGTCTCAGCTGATGATGTTCCCACCTAGGGACTTTAGTTTCTTTGAGTTGTACAGCACCTaGTATTTCCTGTGTTCTGAC +
Preference number: 5 (lower is better)
Translates to: MGRLSQLMMFPPRDFSFFELYST*YFLCSD
Trigger: GTCAGAACACAGGAAATACAAGGTGCTGTACAACTC...AAAGAAACTAAAGTCCCTAGGTGGGAACATCATCAGCTGAGACAGCCTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp TGCCTGCACCCAGGTGAAATAAACAGCCTTGTTACTTACACAAAGCCTGTTTGGTGCTTGGTGAGAACCTaGCAAAGACTTTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: CLHPGEINSLVTYTKPVWCLVRT*QRLWVF
Trigger: AAACACCCAAAGTCTTTGCAAGGTTCTCACCAAGCA...CCAAACAGGCTTTGTGTAAGTAACAAGGCTGTTTATTTCACCTGGGTGCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp CGAGAAAGTGAAGGTGATCAGGAAGGACAAGCTGTAGGTGAAGTATCATTTTCAAGTTTCGGGCTCTGCTaGGTGAGAACCTTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: RESEGDQEGQAVGEVSFSSFGLC*VRTLQR
Trigger: TCTTTGCAAGGTTCTCACCAAGCAGAGCCCGAAACT...TGAAAATGATACTTCACCTACAGCTTGTCCTTCCTGATCACCTTCACTTTCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCCCCAGATCTGACTCTTaGTCATGTGATAAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: NQTELGSSPGFTFPSCVIPRSDS*SCDKLE
Trigger: CTCTAGCTTATCACATGACAAAGAGTCAGATCTGGG...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp CAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCTCACTCTCAATTAATTCCTaGATCTCCATCATGCTTGCT +
Preference number: 5 (lower is better)
Translates to: QTELGSSPGFTFPSCVISLSINS*ISIMLA
Trigger: AGCAAGCATGATGGAGATCAAGGAATTAATTGAGAG...TGAGATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp CATGTTGTGGGAAGAGGAGACCCCAGCAAGTGTTTCTTAAGTGATTTCACCAGTTCATGGGTAATAGTGTaGAAGCTCAGGAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: HVVGRGDPSKCFLSDFTSSWVIV*KLRKPL
Trigger: TAAAGGCTTCCTGAGCTTCAACACTATTACCCATGA...ACTGGTGAAATCACTTAAGAAACACTTGCTGGGGTCTCCTCTTCCCACAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS-3UTR CAA 90 bp ATGCCTGTAAATGTATTTCTAGGGCATGTAAAAGCCAAGTCGCTCACATTCAGAAAATCACCTCAAGTTTaGGAGGCAGGATTGACCTGG +
Preference number: 5 (lower is better)
Translates to: MPVNVFLGHVKAKSLTFRKSPQV*EAGLTW
Trigger: CCAGGTCAATCCTGCCTCCAAAACTTGAGGTGATTT...TCTGAATGTGAGCGACTTGGCTTTTACATGCCCTAGAAATACATTTACAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS GCA 90 bp TTTATTTTCTTTAATAATTCCTTTGTCACAGTGATATTAAAAGTCTaGTCCCACGACACCCAGGCTTTGTCACCTTCGTGCCACGGCTTC +
Preference number: 5 (lower is better)
Translates to: FIFFNNSFVTVILKV*SHDTQALSPSCHGF
Trigger: GAAGCCGTGGCACGAAGGTGACAAAGCCTGGGTGTCGTGGGAGCAGACTTTTAATATCACTGTGACAAAGGAATTATTAAAGAAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265068.9
ENST00000510149.1
ENST00000511438.5
ENST00000515659.1
ENST00000645291.2
CDS-3UTR CAA 90 bp AATCAAACAGAGCTGGGTTCAAGTCCAGGCTTCACATTTCCTAGCTGTGTGATCATACTTTGGCCACCATaGGAAATAGCAATATGTCAA +
Preference number: 5 (lower is better)
Translates to: NQTELGSSPGFTFPSCVIILWPP*EIAICQ
Trigger: TTGACATATTGCTATTTCCAATGGTGGCCAAAGTAT...GATCACACAGCTAGGAAATGTGAAGCCTGGACTTGAACCCAGCTCTGTTTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS-3UTR CAA 90 bp ATGCCTGTAAATGTATTTCTAGGGCATGTAAAAGCCAAGTCGCTCACATTCAGAGAAGAATCGTCCATTTaGAGGGACTTCTCATATTCC +
Preference number: 5 (lower is better)
Translates to: MPVNVFLGHVKAKSLTFREESSI*RDFSYS
Trigger: GGAATATGAGAAGTCCCTCAAAATGGACGATTCTTC...TCTGAATGTGAGCGACTTGGCTTTTACATGCCCTAGAAATACATTTACAGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS-3UTR CAA 90 bp CGAGAAAGTGAAGGTGATCAGGAAGGACAAGCTGTAGGTGAAGTATCATTTTCAAAATGGTTGGTGTTCTaGAAACACTCCATTGAATCG +
Preference number: 5 (lower is better)
Translates to: RESEGDQEGQAVGEVSFSKWLVF*KHSIES
Trigger: CGATTCAATGGAGTGTTTCAAGAACACCAACCATTT...TGAAAATGATACTTCACCTACAGCTTGTCCTTCCTGATCACCTTCACTTTCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265068.9
CDS CAA 90 bp CCGCCGGCGCTCCTGCGAGCGGATGCGCTGGGCGGCAGCGGGGAGTaGGACCGCGGCGGCAACTCCCGTACCGGATCCACAGCCACCTGG +
Preference number: 6 (lower is better)
Translates to: PPALLRADALGGSGE*DRGGNSRTGSTATW
Trigger: CCAGGTGGCTGTGGATCCGGTACGGGAGTTGCCGCCGCGGTCCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGAGCGCCGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000645291.2
CDS CCA 72 bp ACTGCTGGCCGCCGGCGCTCCTGCGAGCGGATGCGCTaGGCGGCAGCGGGGAGTTGGACCGCGGCGGCAACT +
Preference number: 6 (lower is better)
Translates to: TAGRRRSCERMR*AAAGSWTAAAT
Trigger: AGTTGCCGCCGCGGTCCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGAGCGCCGGCGGCCAGCAGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000645291.2
CDS CCA 72 bp CCTCCAGGTGCTGGCGGTACCTGCGAGCGGATGCGCTaGGCGGCAGCGGGGAGTTGGACCGCGGCGGCAACT +
Preference number: 6 (lower is better)
Translates to: PPGAGGTCERMR*AAAGSWTAAAT
Trigger: AGTTGCCGCCGCGGTCCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGTACCGCCAGCACCTGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CAA 90 bp TGCTGGCGGTACCTGCGAGCGGATGCGCTGGGCGGCAGCGGGGAGTaGGACCGCGGCGGCAACTCCCGTACCGGATCCACAGCCACCTGG +
Preference number: 6 (lower is better)
Translates to: CWRYLRADALGGSGE*DRGGNSRTGSTATW
Trigger: CCAGGTGGCTGTGGATCCGGTACGGGAGTTGCCGCCGCGGTCCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGTACCGCCAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CCA 72 bp TCCTGCGAGCGGATGCGCTGGGCGGCAGCGGGGAGTTaGACCGCGGCGGCAACTCCCGTACCGGATCCACAG +
Preference number: 6 (lower is better)
Translates to: SCERMRWAAAGS*TAAATPVPDPQ
Trigger: CTGTGGATCCGGTACGGGAGTTGCCGCCGCGGTCCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000645291.2
CDS CCA 72 bp ACCTGCGAGCGGATGCGCTGGGCGGCAGCGGGGAGTTaGACCGCGGCGGCAACTCCCGTACCGGATCCACAG +
Preference number: 6 (lower is better)
Translates to: TCERMRWAAAGS*TAAATPVPDPQ
Trigger: CTGTGGATCCGGTACGGGAGTTGCCGCCGCGGTCCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CAA 72 bp CTCCTGCGAGCGGATGCGCTGGGCGGCAGCGGGGAGTaGGACCGCGGCGGCAACTCCCGTACCGGATCCACA +
Preference number: 6 (lower is better)
Translates to: LLRADALGGSGE*DRGGNSRTGST
Trigger: TGTGGATCCGGTACGGGAGTTGCCGCCGCGGTCCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000645291.2
CDS CAA 72 bp TACCTGCGAGCGGATGCGCTGGGCGGCAGCGGGGAGTaGGACCGCGGCGGCAACTCCCGTACCGGATCCACA +
Preference number: 6 (lower is better)
Translates to: YLRADALGGSGE*DRGGNSRTGST
Trigger: TGTGGATCCGGTACGGGAGTTGCCGCCGCGGTCCAACTCCCCGCTGCCGCCCAGCGCATCCGCTCGCAGGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS GCA 72 bp ACTCCCAGGCATGTAGCGACATGCTGCAGAGCGCACTaGTGGCCGCCGGCGCTCCTGCGAGCGGATGCGCTG +
Preference number: 6 (lower is better)
Translates to: TPRHVATCCRAH*WPPALLRADAL
Trigger: CAGCGCATCCGCTCGCAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCATGTCGCTACATGCCTGGGAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000645291.2
CDS GCA 72 bp CGGGGTCCTCTTCCCACTCCCAGGCATGTAGCGACATaGTGCAGAGCGCACTGCTGGCCGCCGGCGCTCCTG +
Preference number: 6 (lower is better)
Translates to: RGPLPTPRHVAT*CRAHCWPPALL
Trigger: CAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCATGTCGCTACATGCCTGGGAGTGGGAAGAGGACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265068.9
ENST00000511438.5
ENST00000645291.2
CDS TCA 72 bp CACTGCTGGCCGCCGGCGCTCCTGGCAGGGAGAAAGTaGAGGCTGTCCCCGCCTGTATTCCAGGGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: HCWPPALLAGRK*RLSPPVFQGCS
Trigger: GGAGCAGCCCTGGAATACAGGCGGGGACAGCCTTCACTTTCTCCCTGCCAGGAGCGCCGGCGGCCAGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS GCA 72 bp GGTCCTCTTCCCACTCCCAGGCATGTAGCGACATGCTaGAGAGCGCACTGCTGGCCGCCGGCGCTCCTGCGA +
Preference number: 6 (lower is better)
Translates to: GPLPTPRHVATC*RAHCWPPALLR
Trigger: TCGCAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCATGTCGCTACATGCCTGGGAGTGGGAAGAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000645291.2
CDS GCA 72 bp GGTCCTCTTCCCACTCCCAGGCATGTAGCGACATGCTaGAGAGCGCACTGCTGGCCGCCGGCGCTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: GPLPTPRHVATC*RAHCWPPALLA
Trigger: TGCCAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCATGTCGCTACATGCCTGGGAGTGGGAAGAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CCA 72 bp CGGGTGTGGGGGAGGCTGTGCAGGTTCACCATGCGGTaGCCGTGGGAGGGTCTGTGCTGCTCAGGAGATGGG +
Preference number: 6 (lower is better)
Translates to: RVWGRLCRFTMR*PWEGLCCSGDG
Trigger: CCCATCTCCTGAGCAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCACACCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS GCA 72 bp TCGCCTAACCAGGAGTCAGTCGCCGGGCTTCTGGAATaGCTGCCCCAGGTGAGCAGCTCCCGGGAGCCACCA +
Preference number: 6 (lower is better)
Translates to: SPNQESVAGLLE*LPQVSSSREPP
Trigger: TGGTGGCTCCCGGGAGCTGCTCACCTGGGGCAGGCATTCCAGAAGCCCGGCGACTGACTCCTGGTTAGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CCA 72 bp CATGCTGCAGAGCGCACTGCTGGCCGCCGGCGCTCCTaGCAGGGAGAAAGTGAAGGCTGTCCCCGCCTGTAT +
Preference number: 6 (lower is better)
Translates to: HAAERTAGRRRS*QGESEGCPRLY
Trigger: ATACAGGCGGGGACAGCCTTCACTTTCTCCCTGCCAGGAGCGCCGGCGGCCAGCAGTGCGCTCTGCAGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS GCA 72 bp AGCGGCATGACGGCCAGCTGGATGGAGAAAGCGCTCTaGTTCCTGGGGCCTGTCAGCGTGGGGTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: SGMTASWMEKAL*FLGPVSVGSAS
Trigger: AGAGGCAGACCCCACGCTGACAGGCCCCAGGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265068.9
ENST00000511438.5
ENST00000515659.1
ENST00000645291.2
CDS CCA 72 bp TCGATGCTGCTGCACGGGCGGTCAGAGTCAGACTCCTaGGCCCTGGCCTTGGCCTTCAGGTGTTCCTCCACG +
Preference number: 6 (lower is better)
Translates to: SMLLHGRSESDS*ALALAFRCSST
Trigger: CGTGGAGGAACACCTGAAGGCCAAGGCCAGGGCCCAGGAGTCTGACTCTGACCGCCCGTGCAGCAGCATCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265068.9
ENST00000511438.5
ENST00000645291.2
CDS CCA 72 bp CAGTGGGTACCGGCAAGGAGCGGCATGACGGCCAGCTaGATGGAGAAAGCGCTCTGCTTCCTGGGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: QWVPARSGMTAS*MEKALCFLGPV
Trigger: GACAGGCCCCAGGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGGTACCCACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS CCA 72 bp TGGGGGAGGCTGTGCAGGTTCACCATGCGGTGGCCGTaGGAGGGTCTGTGCTGCTCAGGAGATGGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: WGRLCRFTMRWP*EGLCCSGDGAV
Trigger: AACAGCCCCATCTCCTGAGCAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCACAGCCTCCCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS CCA 72 bp GCTCCGTGGGCTGGAAGAGGTGCACGTGGTACAGGATaGCCTCCAGGTCCCCATAGAGCCGGCTGCGGAACA +
Preference number: 6 (lower is better)
Translates to: APWAGRGARGTG*PPGPHRAGCGT
Trigger: TGTTCCGCAGCCGGCTCTATGGGGACCTGGAGGCCATCCTGTACCACGTGCACCTCTTCCAGCCCACGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645291.2
ENST00000669741.1
CDS CAA 90 bp ATGCTGCTGCACGGGCGGTCAGAGTCAGACTCCTGGGCCCTGGCCTaGGCCTTCAGGTGTTCCTCCACGTCACACTCGCTCGTGGACTGG +
Preference number: 6 (lower is better)
Translates to: MLLHGRSESDSWALA*AFRCSSTSHSLVDW
Trigger: CCAGTCCACGAGCGAGTGTGACGTGGAGGAACACCTGAAGGCCAAGGCCAGGGCCCAGGAGTCTGACTCTGACCGCCCGTGCAGCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265068.9
ENST00000511438.5
ENST00000645291.2
CDS TCA 72 bp GGGCACGTCGGAGCTGAAAGTGCTGGCAGGCTCAGATaGGGACTCGATGCTGCTGCACGGGCGGTCAGAGTC +
Preference number: 6 (lower is better)
Translates to: GHVGAESAGRLR*GLDAAARAVRV
Trigger: GACTCTGACCGCCCGTGCAGCAGCATCGAGTCCTCATCTGAGCCTGCCAGCACTTTCAGCTCCGACGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265068.9
ENST00000511438.5
ENST00000645291.2
CDS GCA 72 bp AAGTGCTGGCAGGCTCAGATGAGGACTCGATGCTGCTaGACGGGCGGTCAGAGTCAGACTCCTGGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: KCWQAQMRTRCC*TGGQSQTPGPW
Trigger: CCAGGGCCCAGGAGTCTGACTCTGACCGCCCGTGCAGCAGCATCGAGTCCTCATCTGAGCCTGCCAGCACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265068.9
ENST00000511438.5
ENST00000645291.2
CDS CCA 72 bp GTTTGCCATCCGGCAAGGAGCGGCATGACGGCCAGCTaGATGGAGAAAGCGCTCTGCTTCCTGGGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: VCHPARSGMTAS*MEKALCFLGPV
Trigger: GACAGGCCCCAGGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGGATGGCAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS CCA 72 bp AAGGTCAGGATCAGCAGCTCTGGCCCCGGCCCTCAGTaGCACCGCGATGTCCACTCGCAACTTGAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: KVRISSSGPGPQ*HRDVHSQLELG
Trigger: TCCCAGCTCAAGTTGCGAGTGGACATCGCGGTGCCACTGAGGGCCGGGGCCAGAGCTGCTGATCCTGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS CAA 90 bp GCTCAGGCAGGCCTGCTGCGCCTAAGCACAAGATGCGTTTGCTATTaGGGGAGAGGCAAACCAGGCCGGGGGCAGCACGTGCAGGAGCCT +
Preference number: 6 (lower is better)
Translates to: AQAGLLRLSTRCVCY*GRGKPGRGQHVQEP
Trigger: AGGCTCCTGCACGTGCTGCCCCCGGCCTGGTTTGCCTCTCCCCAAATAGCAAACGCATCTTGTGCTTAGGCGCAGCAGGCCTGCCTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CAA 90 bp GACGTCTGCTCAGGCAGGCCTGCTGCGCCTAAGCACAAGATGCGTTaGCTATTTGGGGAGAGGCAAACCAGGCCGGGGGCAGCACGTGCA +
Preference number: 6 (lower is better)
Translates to: DVCSGRPAAPKHKMR*LFGERQTRPGAARA
Trigger: TGCACGTGCTGCCCCCGGCCTGGTTTGCCTCTCCCCAAATAGCAAACGCATCTTGTGCTTAGGCGCAGCAGGCCTGCCTGAGCAGACGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS TCA 72 bp AACAGGGCAAGCAGTGGGTACCGGCAAGGAGCGGCATaGCGGCCAGCTGGATGGAGAAAGCGCTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: NRASSGYRQGAA*RPAGWRKRSAS
Trigger: GGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGGTACCCACTGCTTGCCCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS GCA 72 bp CAGGCAGGCCTGCTGCGCCTAAGCACAAGATGCGTTTaGTATTTGGGGAGAGGCAAACCAGGCCGGGGGCAG +
Preference number: 6 (lower is better)
Translates to: QAGLLRLSTRCV*YLGRGKPGRGQ
Trigger: CTGCCCCCGGCCTGGTTTGCCTCTCCCCAAATAGCAAACGCATCTTGTGCTTAGGCGCAGCAGGCCTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CCA 72 bp TTCTTCCTGACGGCAAGGAGCGGCATGACGGCCAGCTaGATGGAGAAAGCGCTCTGCTTCCTGGGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: FFLTARSGMTAS*MEKALCFLGPV
Trigger: GACAGGCCCCAGGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGTCAGGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CAA 72 bp GGCCTGCTGCGCCTAAGCACAAGATGCGTTTGCTATTaGGGGAGAGGCAAACCAGGCCGGGGGCAGCACGTG +
Preference number: 6 (lower is better)
Translates to: GLLRLSTRCVCY*GRGKPGRGQHV
Trigger: CACGTGCTGCCCCCGGCCTGGTTTGCCTCTCCCCAAATAGCAAACGCATCTTGTGCTTAGGCGCAGCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CAA 72 bp TCCAGGTGCTGCTGCTCCTGGACCCGCACACGCACCTaGAAGGCTGACAGGATCTGCTGCAGGGTCCTGACA +
Preference number: 6 (lower is better)
Translates to: SRCCCSWTRTRT*KADRICCRVLT
Trigger: TGTCAGGACCCTGCAGCAGATCCTGTCAGCCTTCAAGGTGCGTGTGCGGGTCCAGGAGCAGCAGCACCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS TCA 72 bp GACTCACGACAGTTTGCCATCCGGCAAGGAGCGGCATaGCGGCCAGCTGGATGGAGAAAGCGCTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: DSRQFAIRQGAA*RPAGWRKRSAS
Trigger: GGAAGCAGAGCGCTTTCTCCATCCAGCTGGCCGTCATGCCGCTCCTTGCCGGATGGCAAACTGTCGTGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS GCA 72 bp GCTTATGGCCGTTCTGGCCACAAGACAAGCAGGAGCTaGTGGGAACAGGGCAAGCAGTGGGTACCGGCAAGG +
Preference number: 6 (lower is better)
Translates to: AYGRSGHKTSRS*WEQGKQWVPAR
Trigger: CCTTGCCGGTACCCACTGCTTGCCCTGTTCCCAGCAGCTCCTGCTTGTCTTGTGGCCAGAACGGCCATAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS CCA 72 bp CAAGCCCTGTCCCCAAGACAGAACATGAATGTGCACTaGGTGCTGGGCTCGGGGCATCAGCTCAGGCCCATG +
Preference number: 6 (lower is better)
Translates to: QALSPRQNMNVH*VLGSGHQLRPM
Trigger: CATGGGCCTGAGCTGATGCCCCGAGCCCAGCACCCAGTGCACATTCATGTTCTGTCTTGGGGACAGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS CCA 72 bp GCACTCCGCCACTGCAGGTACTTCTCCTGGTGGGCGTaGATCTCTAAGGTGAGGGTGGAGTTCCGACTGTGG +
Preference number: 6 (lower is better)
Translates to: ALRHCRYFSWWA*ISKVRVEFRLW
Trigger: CCACAGTCGGAACTCCACCCTCACCTTAGAGATCCACGCCCACCAGGAGAAGTACCTGCAGTGGCGGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS CCA 72 bp TGGAAGCCAGTGAGCACATCCAGGTGCTGCTGCTCCTaGACCCGCACACGCACCTTGAAGGCTGACAGGATC +
Preference number: 6 (lower is better)
Translates to: WKPVSTSRCCCS*TRTRTLKADRI
Trigger: GATCCTGTCAGCCTTCAAGGTGCGTGTGCGGGTCCAGGAGCAGCAGCACCTGGATGTGCTCACTGGCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS CAA 72 bp TCAGGCAGGCCTGCTGCGCCTAAGCACAAGATGCGTTaGCTATTTGGGGAGAGGCAAACCAGGCCGGGGGCA +
Preference number: 6 (lower is better)
Translates to: SGRPAAPKHKMR*LFGERQTRPGA
Trigger: TGCCCCCGGCCTGGTTTGCCTCTCCCCAAATAGCAAACGCATCTTGTGCTTAGGCGCAGCAGGCCTGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS GCA 72 bp TCTGCTCAGGCAGGCCTGCTGCGCCTAAGCACAAGATaGGTTTGCTATTTGGGGAGAGGCAAACCAGGCCGG +
Preference number: 6 (lower is better)
Translates to: SAQAGLLRLSTR*VCYLGRGKPGR
Trigger: CCGGCCTGGTTTGCCTCTCCCCAAATAGCAAACGCATCTTGTGCTTAGGCGCAGCAGGCCTGCCTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511438.5
CDS GCA 72 bp AGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTGCTaGTCAGGAGATGGGGCTGTTCCCTTTCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: RFTMRWPWEGLC*SGDGAVPFLLP
Trigger: AGGAAGAAGAAAGGGAACAGCCCCATCTCCTGAGCAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS GCA 72 bp TGCAGGTTCACCATGCGGTGGCCGTGGGAGGGTCTGTaGTGCTCAGGAGATGGGGCTGTTCCCTTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: CRFTMRWPWEGL*CSGDGAVPFLL
Trigger: AAGAAGAAAGGGAACAGCCCCATCTCCTGAGCAGCACAGACCCTCCCACGGCCACCGCATGGTGAACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511438.5
ENST00000645291.2
CDS GCA 72 bp CAAACAGCACGGGCTTCTGAGAACACTCCTCTGACTTaGGGTCCCGGTCGTGAACTTCCACCACCATGGGGG +
Preference number: 6 (lower is better)
Translates to: QTARASENTPLT*GPGRELPPPWG
Trigger: CCCCCATGGTGGTGGAAGTTCACGACCGGGACCGCAAGTCAGAGGAGTGTTCTCAGAAGCCCGTGCTGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511204.1
ENST00000645291.2
CDS GCA 72 bp GCAGCAGGTCCCTCACCGTCACGTCCCAGAGGGTGGTaGTGTTATAGCAGATGTCGTGGATCCTGGCTAGAG +
Preference number: 6 (lower is better)
Translates to: AAGPSPSRPRGW*CYSRCRGSWLE
Trigger: CTCTAGCCAGGATCCACGACATCTGCTATAACAGCACCACCCTCTGGGACGTGACGGTGAGGGACCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS GCA 72 bp GGTACAGGATGGCCTCCAGGTCCCCATAGAGCCGGCTaGGGAACAGCAGCTGTGAGTTGTACAGCACCTTGT +
Preference number: 6 (lower is better)
Translates to: GTGWPPGPHRAG*GTAAVSCTAPC
Trigger: ACAAGGTGCTGTACAACTCACAGCTGCTGTTCCGCAGCCGGCTCTATGGGGACCTGGAGGCCATCCTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645291.2
ENST00000669741.1
CDS CCA 72 bp AGGGCAGCAGGTCCCTCACCGTCACGTCCCAGAGGGTaGTGCTGTTATAGCAGATGTCGTGGATCCTGGCTA +
Preference number: 6 (lower is better)
Translates to: RAAGPSPSRPRG*CCYSRCRGSWL
Trigger: TAGCCAGGATCCACGACATCTGCTATAACAGCACCACCCTCTGGGACGTGACGGTGAGGGACCTGCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS CCA 72 bp AGCATGGCACTCCGCCACTGCAGGTACTTCTCCTGGTaGGCGTGGATCTCTAAGGTGAGGGTGGAGTTCCGA +
Preference number: 6 (lower is better)
Translates to: SMALRHCRYFSW*AWISKVRVEFR
Trigger: TCGGAACTCCACCCTCACCTTAGAGATCCACGCCCACCAGGAGAAGTACCTGCAGTGGCGGAGTGCCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS CCA 72 bp GGCCGCAGTGTGTGGGCTGAACCTCACAGCTGTGGATaGGGACGGCCAGATTCAAGTACTTGTGGCCAAGGA +
Preference number: 6 (lower is better)
Translates to: GRSVWAEPHSCG*GRPDSSTCGQG
Trigger: TCCTTGGCCACAAGTACTTGAATCTGGCCGTCCCCATCCACAGCTGTGAGGTTCAGCCCACACACTGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS CAA 90 bp CCTGGGAATCCAGCTTTGGTGGTTCTCCCACAGCTGCCTCAAGCCTaGGTCGGCCAGGCCTTCCAGGATGAAAAGGTGTGTCTTCCCGTC +
Preference number: 6 (lower is better)
Translates to: PGNPALVVLPQLPQA*VGQAFQDEKVCLPV
Trigger: GACGGGAAGACACACCTTTTCATCCTGGAAGGCCTGGCCGACCAAGGCTTGAGGCAGCTGTGGGAGAACCACCAAAGCTGGATTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS TCA 72 bp TCTGACCCATATTCACAGGGAAGGCCAGTGAGATGGTaGATTTGCAGGGGACCACGTGGGGCACGTCGGAGC +
Preference number: 6 (lower is better)
Translates to: SDPYSQGRPVRW*ICRGPRGARRS
Trigger: GCTCCGACGTGCCCCACGTGGTCCCCTGCAAATTCACCATCTCACTGGCCTTCCCTGTGAATATGGGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265068.9
ENST00000511438.5
ENST00000645291.2
CDS TCA 72 bp CTCCCCAAACAGCACGGGCTTCTGAGAACACTCCTCTaGCTTGCGGTCCCGGTCGTGAACTTCCACCACCAT +
Preference number: 6 (lower is better)
Translates to: LPKQHGLLRTLL*LAVPVVNFHHH
Trigger: ATGGTGGTGGAAGTTCACGACCGGGACCGCAAGTCAGAGGAGTGTTCTCAGAAGCCCGTGCTGTTTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511204.1
ENST00000645291.2
CDS GCA 72 bp GTCTGCTCCCACGACACCCAGGCTTTGTCACCTTCGTaGCACGGCTTCACAGTCTTTACTCCTGACTCCAGG +
Preference number: 6 (lower is better)
Translates to: VCSHDTQALSPS*HGFTVFTPDSR
Trigger: CCTGGAGTCAGGAGTAAAGACTGTGAAGCCGTGGCACGAAGGTGACAAAGCCTGGGTGTCGTGGGAGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265068.9
ENST00000510149.1
ENST00000511438.5
ENST00000515659.1
ENST00000645291.2
CDS CAA 90 bp GCTGACGCCATTTTAGGCCTCAGCCGGCCTGCACCAAGGCGTTCATaGAAACAGCATGTTGCTCCACACCGCCTCGTGTTGTCTGTTGGT +
Preference number: 6 (lower is better)
Translates to: ADAILGLSRPAPRRS*KQHVAPHRLVLSVG
Trigger: ACCAACAGACAACACGAGGCGGTGTGGAGCAACATGCTGTTTCAATGAACGCCTTGGTGCAGGCCGGCTGAGGCCTAAAATGGCGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515659.1
CDS CAA 90 bp GAGATCCTGAAAGCTGCTTTCGGTGTCGCTCTGAAGACCTGTCACTaGGAATCCCCTGGCTGTGAGCCAGGCCTGGCGGGATTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: EILKAAFGVALKTCH*ESPGCEPGLAGFLL
Trigger: CAGAAGAAATCCCGCCAGGCCTGGCTCACAGCCAGGGGATTCCAAGTGACAGGTCTTCAGAGCGACACCGAAAGCAGCTTTCAGGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS TCA 72 bp CTCTCTGGGAGAGATGAGGGCCTGGAAGTTGAGGTATaGATCCAGAGGGTCCTCCCCAAACAGCACGGGCTT +
Preference number: 6 (lower is better)
Translates to: LSGRDEGLEVEV*IQRVLPKQHGL
Trigger: AAGCCCGTGCTGTTTGGGGAGGACCCTCTGGATTCATACCTCAACTTCCAGGCCCTCATCTCTCCCAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511204.1
ENST00000645291.2
CDS GCA 72 bp AGGCCGAGGGCCTTAGCGTTGATCATGGTGATGTCCTaGAGCAGGCTGTGGAGCAGGGAGACCTTCTTAAAG +
Preference number: 6 (lower is better)
Translates to: RPRALALIMVMS*SRLWSRETFLK
Trigger: CTTTAAGAAGGTCTCCCTGCTCCACAGCCTGCTGCAGGACATCACCATGATCAACGCTAAGGCCCTCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS CCA 72 bp AGGGTTGTCATTAGGAGCATCCGCTTATGGCCGTTCTaGCCACAAGACAAGCAGGAGCTGCTGGGAACAGGG +
Preference number: 6 (lower is better)
Translates to: RVVIRSIRLWPF*PQDKQELLGTG
Trigger: CCCTGTTCCCAGCAGCTCCTGCTTGTCTTGTGGCCAGAACGGCCATAAGCGGATGCTCCTAATGACAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265068.9
ENST00000515659.1
CDS CCA 72 bp GAAGCAGGAGGAGAGCCGGCTGGAATACACCTACCCTaGCCGGAAGACATGAAGATGAGAAAGAGGCCATCC +
Preference number: 6 (lower is better)
Translates to: EAGGEPAGIHLP*PEDMKMRKRPS
Trigger: GGATGGCCTCTTTCTCATCTTCATGTCTTCCGGCCAGGGTAGGTGTATTCCAGCCGGCTCTCCTCCTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515659.1
CDS CCA 72 bp GGGGGAGTAAGTAAATCAGGAGGAGAAAGGTCCCTATaGACACCCCACCTGAGACCCTGCTCTTCCCTGTGG +
Preference number: 6 (lower is better)
Translates to: GGVSKSGGERSL*TPHLRPCSSLW
Trigger: CCACAGGGAAGAGCAGGGTCTCAGGTGGGGTGTCCATAGGGACCTTTCTCCTCCTGATTTACTTACTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS TCA 72 bp GCAGGTACTTCTCCTGGTGGGCGTGGATCTCTAAGGTaGGGGTGGAGTTCCGACTGTGGTAGTCCTCAAGAT +
Preference number: 6 (lower is better)
Translates to: AGTSPGGRGSLR*GWSSDCGSPQD
Trigger: ATCTTGAGGACTACCACAGTCGGAACTCCACCCTCACCTTAGAGATCCACGCCCACCAGGAGAAGTACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS CAA 72 bp ATTTTAGGCCTCAGCCGGCCTGCACCAAGGCGTTCATaGAAACAGCATGTTGCTCCACACCGCCTCGTGTTG +
Preference number: 6 (lower is better)
Translates to: ILGLSRPAPRRS*KQHVAPHRLVL
Trigger: CAACACGAGGCGGTGTGGAGCAACATGCTGTTTCAATGAACGCCTTGGTGCAGGCCGGCTGAGGCCTAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515659.1
CDS CAA 72 bp TCACAGCTGTGGATGGGGACGGCCAGATTCAAGTACTaGTGGCCAAGGAGGAGGTCAGCAAAACTGACCTGG +
Preference number: 6 (lower is better)
Translates to: SQLWMGTARFKY*WPRRRSAKLTW
Trigger: CCAGGTCAGTTTTGCTGACCTCCTCCTTGGCCACAAGTACTTGAATCTGGCCGTCCCCATCCACAGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS GCA 72 bp CCCACTTTTCTGCTCCACCGCCACATCATCGCGTCTTaGCCCTTTAACCTAGGAATTGCACCTGTCTGGGTA +
Preference number: 6 (lower is better)
Translates to: PTFLLHRHIIAS*PFNLGIAPVWV
Trigger: TACCCAGACAGGTGCAATTCCTAGGTTAAAGGGGCAAGACGCGATGATGTGGCGGTGGAGCAGAAAAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510149.1
CDS CCA 72 bp GTGGGTTCCATGGGGCTCCCCCTTGGTCTTGTGAACTaGAGTCTTATGGAACTGGTACTTGCAGTACACAGG +
Preference number: 6 (lower is better)
Translates to: VGSMGLPLGLVN*SLMELVLAVHR
Trigger: CCTGTGTACTGCAAGTACCAGTTCCATAAGACTCCAGTTCACAAGACCAAGGGGGAGCCCCATGGAACCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511204.1
ENST00000645291.2
CDS CCA 72 bp AGTACACAGGCATGCACAGCCTCTCTAGTTCCTGAATaGGTACAGGCTGTGATGGAAGGCAGGAAGCACACT +
Preference number: 6 (lower is better)
Translates to: STQACTASLVPE*VQAVMEGRKHT
Trigger: AGTGTGCTTCCTGCCTTCCATCACAGCCTGTACCCATTCAGGAACTAGAGAGGCTGTGCATGCCTGTGTACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511204.1
ENST00000645291.2
CDS CCA 72 bp CTCTTCCCTGTGGACCTCATTCAGCTCTTTGATGGGTaGCAGCTTGAGATCCTGAAAGCTGCTTTCGGTGTC +
Preference number: 6 (lower is better)
Translates to: LFPVDLIQLFDG*QLEILKAAFGV
Trigger: GACACCGAAAGCAGCTTTCAGGATCTCAAGCTGCCACCCATCAAAGAGCTGAATGAGGTCCACAGGGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669741.1
CDS CAA 72 bp CGGCTGCGGAACAGCAGCTGTGAGTTGTACAGCACCTaGTATTTCCTGTGTTCTGACCTGGGAATCCAGCTT +
Preference number: 6 (lower is better)
Translates to: RLRNSSCELYST*YFLCSDLGIQL
Trigger: AAGCTGGATTCCCAGGTCAGAACACAGGAAATACAAGGTGCTGTACAACTCACAGCTGCTGTTCCGCAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645291.2
ENST00000669741.1
CDS TCA 72 bp TCAAGTACTTGTGGCCAAGGAGGAGGTCAGCAAAACTaGCCTGGGCGATGCCATAAGGGTACCACATCTTGT +
Preference number: 6 (lower is better)
Translates to: SSTCGQGGGQQN*PGRCHKGTTSC
Trigger: ACAAGATGTGGTACCCTTATGGCATCGCCCAGGTCAGTTTTGCTGACCTCCTCCTTGGCCACAAGTACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511204.1
ENST00000645291.2
CDS GCA 72 bp CAAACTTGCATATTTTCCCTTCTGACGTCAGCAGCGTaGACCAGCAAAATAGCAGAAGCAGGAGGAGAGCCG +
Preference number: 6 (lower is better)
Translates to: QTCIFSLLTSAA*TSKIAEAGGEP
Trigger: CGGCTCTCCTCCTGCTTCTGCTATTTTGCTGGTGCACGCTGCTGACGTCAGAAGGGAAAATATGCAAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515659.1
CDS GCA 72 bp TTGTCTTTGTTCTTCATAAGCATGGCACTCCGCCACTaGAGGTACTTCTCCTGGTGGGCGTGGATCTCTAAG +
Preference number: 6 (lower is better)
Translates to: LSLFFISMALRH*RYFSWWAWISK
Trigger: CTTAGAGATCCACGCCCACCAGGAGAAGTACCTGCAGTGGCGGAGTGCCATGCTTATGAAGAACAAAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS CCA 72 bp CCTGGAAATAAACGTGGGTTCCATGGGGCTCCCCCTTaGTCTTGTGAACTGGAGTCTTATGGAACTGGTACT +
Preference number: 6 (lower is better)
Translates to: PGNKRGFHGAPP*SCELESYGTGT
Trigger: AGTACCAGTTCCATAAGACTCCAGTTCACAAGACCAAGGGGGAGCCCCATGGAACCCACGTTTATTTCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511204.1
ENST00000645291.2
CDS CAA 90 bp TTTGTCACAGTGATATTAAAAGTCTGCTCCCACGACACCCAGGCTTaGTCACCTTCGTGCCACGGCTTCACAGTCTTTACTCCTGACTCC +
Preference number: 6 (lower is better)
Translates to: FVTVILKVCSHDTQA*SPSCHGFTVFTPDS
Trigger: GGAGTCAGGAGTAAAGACTGTGAAGCCGTGGCACGAAGGTGACAAAGCCTGGGTGTCGTGGGAGCAGACTTTTAATATCACTGTGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265068.9
ENST00000510149.1
ENST00000511438.5
ENST00000515659.1
ENST00000645291.2
CDS TCA 72 bp CAGGCTGAGGTGGTAGGGCAAACAGTTTCTCATCTGTaGGTTCTTCTTGCGAAAGGGGCATCCCAAACTCTT +
Preference number: 6 (lower is better)
Translates to: QAEVVGQTVSHL*VLLAKGASQTL
Trigger: AAGAGTTTGGGATGCCCCTTTCGCAAGAAGAACTCACAGATGAGAAACTGTTTGCCCTACCACCTCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS CAA 72 bp GTGATATTAAAAGTCTGCTCCCACGACACCCAGGCTTaGTCACCTTCGTGCCACGGCTTCACAGTCTTTACT +
Preference number: 6 (lower is better)
Translates to: VILKVCSHDTQA*SPSCHGFTVFT
Trigger: AGTAAAGACTGTGAAGCCGTGGCACGAAGGTGACAAAGCCTGGGTGTCGTGGGAGCAGACTTTTAATATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265068.9
ENST00000510149.1
ENST00000511438.5
ENST00000515659.1
ENST00000645291.2
CDS CAA 90 bp TTTCTCATCTGTGAGTTCTTCTTGCGAAAGGGGCATCCCAAACTCTaGGCTCAAGTCTTTTATCATAGCAGAGGAGGGCAGCAGGTCCCT +
Preference number: 6 (lower is better)
Translates to: FLICEFFLRKGHPKL*AQVFYHSRGGQQVP
Trigger: AGGGACCTGCTGCCCTCCTCTGCTATGATAAAAGACTTGAGCCAAGAGTTTGGGATGCCCCTTTCGCAAGAAGAACTCACAGATGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS TCA 72 bp GCTCCACCATGGCTGAGAGGTAATCCTGTGAGTACGTaGATCTCTTTCTTGGCTCCTTGGCTATCTCTTGAT +
Preference number: 6 (lower is better)
Translates to: APPWLRGNPVST*ISFLAPWLSLD
Trigger: ATCAAGAGATAGCCAAGGAGCCAAGAAAGAGATTCACGTACTCACAGGATTACCTCTCAGCCATGGTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS GCA 72 bp GGTAGGGCAAACAGTTTCTCATCTGTGAGTTCTTCTTaGGAAAGGGGCATCCCAAACTCTTGGCTCAAGTCT +
Preference number: 6 (lower is better)
Translates to: GRANSFSSVSSS*ERGIPNSWLKS
Trigger: AGACTTGAGCCAAGAGTTTGGGATGCCCCTTTCGCAAGAAGAACTCACAGATGAGAAACTGTTTGCCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS GCA 72 bp TCAAAAGGCAATCTAAAATGTTGGCAGACTTCTCACTaGCACGACTCACGACAGTTTGCCATCCGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: SKGNLKCWQTSH*HDSRQFAIRQG
Trigger: TCCTTGCCGGATGGCAAACTGTCGTGAGTCGTGGCAGTGAGAAGTCTGCCAACATTTTAGATTGCCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645291.2
CDS CAA 72 bp TGTGAGTTCTTCTTGCGAAAGGGGCATCCCAAACTCTaGGCTCAAGTCTTTTATCATAGCAGAGGAGGGCAG +
Preference number: 6 (lower is better)
Translates to: CEFFLRKGHPKL*AQVFYHSRGGQ
Trigger: CTGCCCTCCTCTGCTATGATAAAAGACTTGAGCCAAGAGTTTGGGATGCCCCTTTCGCAAGAAGAACTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000637488.2
ENST00000645291.2
ENST00000669741.1
CDS CCA 72 bp GCGTCTTGCCCCTTTAACCTAGGAATTGCACCTGTCTaGGTAGTCTCACATATTCCCTTTCAACAAGCATCT +
Preference number: 6 (lower is better)
Translates to: ASCPFNLGIAPV*VVSHIPFQQAS
Trigger: AGATGCTTGTTGAAAGGGAATATGTGAGACTACCCAGACAGGTGCAATTCCTAGGTTAAAGGGGCAAGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510149.1
CDS CAA 72 bp ATGGGTACAGGCTGTGATGGAAGGCAGGAAGCACACTaGATCTTTATGGTCAGGGGATTTAAATCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: MGTGCDGRQEAH*IFMVRGFKSCF
Trigger: AAAGCAGGATTTAAATCCCCTGACCATAAAGATCAAGTGTGCTTCCTGCCTTCCATCACAGCCTGTACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511204.1
ENST00000645291.2
CDS TCA 72 bp CATGCTTGCTCCTGCCAAAGAAATGGTTGGTGTTCTTaGAACACTCCATTGAATCGTGGAAGAATCGTCCAT +
Preference number: 6 (lower is better)
Translates to: HACSCQRNGWCS*NTPLNRGRIVH
Trigger: ATGGACGATTCTTCCACGATTCAATGGAGTGTTTCAAGAACACCAACCATTTCTTTGGCAGGAGCAAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265068.9
ENST00000507225.1
ENST00000511438.5
ENST00000515659.1
ENST00000645291.2
CDS GCA 72 bp GCACACTTGATCTTTATGGTCAGGGGATTTAAATCCTaGTTTTGCTCCTCGGTCATGATCGGAACTTCTGTT +
Preference number: 6 (lower is better)
Translates to: AHLIFMVRGFKS*FCSSVMIGTSV
Trigger: AACAGAAGTTCCGATCATGACCGAGGAGCAAAAGCAGGATTTAAATCCCCTGACCATAAAGATCAAGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511204.1
ENST00000645291.2
CDS CAA 72 bp GGCGGATGTTCCTGGTTCGACTCTTCTCTGACAATGTaGGTATTCTCAATGCCCTGTTCAGATAATTTTCTC +
Preference number: 6 (lower is better)
Translates to: GGCSWFDSSLTM*VFSMPCSDNFL
Trigger: GAGAAAATTATCTGAACAGGGCATTGAGAATACCAACATTGTCAGAGAAGAGTCGAACCAGGAACATCCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265068.9
ENST00000507225.1
ENST00000510149.1
ENST00000511438.5
ENST00000515659.1
ENST00000645291.2
CDS CAA 72 bp TCATGCTTGCTCCTGCCAAAGAAATGGTTGGTGTTCTaGAAACACTCCATTGAATCGTGGAAGAATCGTCCA +
Preference number: 6 (lower is better)
Translates to: SCLLLPKKWLVF*KHSIESWKNRP
Trigger: TGGACGATTCTTCCACGATTCAATGGAGTGTTTCAAGAACACCAACCATTTCTTTGGCAGGAGCAAGCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265068.9
ENST00000507225.1
ENST00000511438.5
ENST00000515659.1
ENST00000645291.2
CDS TCA 72 bp AAACACTCCATTGAATCGTGGAAGAATCGTCCATTTTaGGGGACTTCTCATATTCCTCACTGTTCTTGGAAG +
Preference number: 6 (lower is better)
Translates to: KHSIESWKNRPF*GTSHIPHCSWK
Trigger: CTTCCAAGAACAGTGAGGAATATGAGAAGTCCCTCAAAATGGACGATTCTTCCACGATTCAATGGAGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265068.9
ENST00000507225.1
ENST00000511438.5
ENST00000515659.1
ENST00000645291.2
CDS TCA 72 bp AGAAACTTACACCATCGACAGAATACCAGGAGAAGTTaGAATCATAATGGTGGGCTAGTTCAAGTAAGCAGA +
Preference number: 6 (lower is better)
Translates to: RNLHHRQNTRRS*NHNGGLVQVSR
Trigger: TCTGCTTACTTGAACTAGCCCACCATTATGATTTCAACTTCTCCTGGTATTCTGTCGATGGTGTAAGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515659.1
CDS CAA 72 bp GTTAAGCTGCTAAGTGATTCACTCTCAATTAATTCCTaGATCTCCATCATGCTTGCTCCTGCCAAAGAAATG +
Preference number: 6 (lower is better)
Translates to: VKLLSDSLSINS*ISIMLAPAKEM
Trigger: CATTTCTTTGGCAGGAGCAAGCATGATGGAGATCAAGGAATTAATTGAGAGTGAATCACTTAGCAGCTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265068.9
ENST00000507225.1
ENST00000511438.5
ENST00000515659.1
ENST00000645291.2
CDS CAA 90 bp AATATGTTTGTTAAGCTGCTAAGTGATTCACTCTCAATTAATTCCTaGATCTCCATCATGCTTGCTCCTGCCAAAGAAATGGTTGGTGTT +
Preference number: 6 (lower is better)
Translates to: NMFVKLLSDSLSINS*ISIMLAPAKEMVGV
Trigger: AACACCAACCATTTCTTTGGCAGGAGCAAGCATGATGGAGATCAAGGAATTAATTGAGAGTGAATCACTTAGCAGCTTAACAAACATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265068.9
ENST00000507225.1
ENST00000511438.5
ENST00000515659.1
ENST00000645291.2