RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP91 (Homo sapiens)

Ensembl gene IDs: ENSG00000183833

Ensembl transcript IDs: ENST00000273390.9, ENST00000461322.1, ENST00000463700.1, ENST00000468630.5, ENST00000469659.5, ENST00000472117.5, ENST00000475093.5, ENST00000475543.1, ENST00000482573.5, ENST00000482927.5, ENST00000482995.5, ENST00000483134.5, ENST00000488533.5, ENST00000496010.5, ENST00000498167.1

Found 652 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTaGCGCTCAGCCAGCATGACAAAGGCATGGATCCTCCTCTCCTCC +
Preference number: 1 (lower is better)
Translates to: STWRRPLSSASRTRR*RSASMTKAWILLSS
Trigger: GGAGGAGAGGAGGATCCATGCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 90 bp TCCTTAAATATCTCGTCCTCCTCCCGCAGGCGCTGTTTTTCCACCTaGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGC +
Preference number: 1 (lower is better)
Translates to: SLNISSSSRRRCFST*RRPLSSASRTRRWR
Trigger: GCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAGCGCCTGCGGGAGGAGGACGAGATATTTAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR TCA 90 bp ACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATTaGGTCCTGACATACTACATATTCTGCAGAGTATGGATCTGTTTG +
Preference number: 1 (lower is better)
Translates to: TPTPSKRSQGQELRD*VLTYYIFCRVWICL
Trigger: CAAACAGATCCATACTCTGCAGAATATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR CCA 90 bp GGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATTaGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTACTTCAAGAAC +
Preference number: 1 (lower is better)
Translates to: GRHFQGWSWKPRLRY*VSLKEARGFLYFKN
Trigger: GTTCTTGAAGTAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR GCA 90 bp ATCCAACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTaGTGCCCTCTTCAGAAAACCAGCTTTGGTGGTAATGACTTTAGG +
Preference number: 1 (lower is better)
Translates to: IQQCLMNLCQLIVQP*CPLQKTSFGGNDFR
Trigger: CCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR GCA 90 bp CAACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTaGCCTCTTCAGAAAACCAGCTTTGGTGGTAATGACTTTAGGTTT +
Preference number: 1 (lower is better)
Translates to: QQCLMNLCQLIVQPC*PLQKTSFGGNDFRF
Trigger: AAACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 90 bp TTCCATTTCTTCTTCTTCATTGGACGTCATTTCCAAGGTTGGAGTTaGAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGG +
Preference number: 1 (lower is better)
Translates to: FHFFFFIGRHFQGWS*KPRLRYWVSLKEAR
Trigger: CCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAAGAAATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR TCA 90 bp CCTCAGTTAATTTCTTTTGAACCATGCTTTCCGTGTAACTGTGGATaGTCTGATGGGCTGCAAGAATATGTTTCCGCTGTGCGTTCCTCA +
Preference number: 1 (lower is better)
Translates to: PQLISFEPCFPCNCG*SDGLQEYVSAVRSS
Trigger: TGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAGAAATTAACTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR GCA 90 bp CTTTTGAACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTaGAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCTTTGAC +
Preference number: 1 (lower is better)
Translates to: LLNHAFRVTVDDLMG*KNMFPLCVPHFFFD
Trigger: GTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 90 bp CACTGTAGAAGCAGACCAAAGTATAGTTTTCTGTTCCGATGGAGATaGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTAC +
Preference number: 1 (lower is better)
Translates to: HCRSRPKYSFLFRWR*TLGFPVWDYCEHHY
Trigger: GTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATACTTTGGTCTGCTTCTACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CCA 90 bp ATGTGCCACTGTAGAAGCAGACCAAAGTATAGTTTTCTGTTCCGATaGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACAC +
Preference number: 1 (lower is better)
Translates to: MCHCRSRPKYSFLFR*RWTLGFPVWDYCEH
Trigger: GTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATACTTTGGTCTGCTTCTACAGTGGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR TCA 90 bp TCCTATTTGACAGTCTTTGAATCAGGAAGAATCCTCCTGGAATCCTaGTGCTTGTCAATACACAGGATGGGCAGATTGCCTTTCAATAGC +
Preference number: 1 (lower is better)
Translates to: SYLTVFESGRILLES*CLSIHRMGRLPFNS
Trigger: GCTATTGAAAGGCAATCTGCCCATCCTGTGTATTGACAAGCATCAGGATTCCAGGAGGATTCTTCCTGATTCAAAGACTGTCAAATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR GCA 90 bp TTCAAGAACTTTATTCTTCTTATCCAACAGTGCCTTATGAACCTCTaGCAACTCATAGTCCAACCTTGCTGCCCTCTTCAGAAAACCAGC +
Preference number: 1 (lower is better)
Translates to: FKNFILLIQQCLMNL*QLIVQPCCPLQKTS
Trigger: GCTGGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGTTGGATAAGAAGAATAAAGTTCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 90 bp AAACCAGCTTTGGTGGTAATGACTTTAGGTTTTGGAGCTCTGATTTaGGGTTGTGTCACAAAATCTGGGAGACATGACTCAAGTTCCACT +
Preference number: 1 (lower is better)
Translates to: KPALVVMTLGFGALI*GCVTKSGRHDSSST
Trigger: AGTGGAACTTGAGTCATGTCTCCCAGATTTTGTGACACAACCCCAAATCAGAGCTCCAAAACCTAAAGTCATTACCACCAAAGCTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 90 bp AGCCATTTCCATTTCTTCTTCTTCATTGGACGTCATTTCCAAGGTTaGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAA +
Preference number: 1 (lower is better)
Translates to: SHFHFFFFIGRHFQG*SWKPRLRYWVSLKE
Trigger: TTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAAGAAATGGAAATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR TCA 90 bp GTTGTCTGGGAAACACCCAAGACGAGACAGAGGTCCATAGACCTGTaGTGCATAATCAGAATAATCCTTGATGATATTTCTTCTCTCCAA +
Preference number: 1 (lower is better)
Translates to: VVWETPKTRQRSIDL*CIIRIILDDISSLQ
Trigger: TTGGAGAGAAGAAATATCATCAAGGATTATTCTGATTATGCATCACAGGTCTATGGACCTCTGTCTCGTCTTGGGTGTTTCCCAGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR TCA 90 bp ACTGAAGATAGGTTCGGCGGCTTTCCATTTCATAAGCAATGTCATTaGTTTTCTCAGCCATCTTCTCTATTTCTGCCCTGGCTTGTTCTT +
Preference number: 1 (lower is better)
Translates to: TEDRFGGFPFHKQCH*FSQPSSLFLPWLVL
Trigger: AAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCTGAGAAAATCAATGACATTGCTTATGAAATGGAAAGCCGCCGAACCTATCTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 90 bp TTAAACCTGGGAACTTTTCTCAGTCTGCTGCGAATCAGGGTAGCTTaGATATTTGCCTGTGTATGGTCTTTCTCACTTGACACAATAAAC +
Preference number: 1 (lower is better)
Translates to: LNLGTFLSLLRIRVA*IFACVWSFSLDTIN
Trigger: GTTTATTGTGTCAAGTGAGAAAGACCATACACAGGCAAATATCCAAGCTACCCTGATTCGCAGCAGACTGAGAAAAGTTCCCAGGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482927.5
3UTR GCA 90 bp TTCATAAGCAATGTCATTGATTTTCTCAGCCATCTTCTCTATTTCTaGCCTGGCTTGTTCTTCTGCAGTATTCGCTTCGGTATTCAGTAT +
Preference number: 1 (lower is better)
Translates to: FISNVIDFLSHLLYF*PGLFFCSIRFGIQY
Trigger: ATACTGAATACCGAAGCGAATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCTGAGAAAATCAATGACATTGCTTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 90 bp TATAGTTTTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTaGGACTATTGTGAACACCACTACTATAAATATTTTTGTCATGCC +
Preference number: 1 (lower is better)
Translates to: YSFLFRWRWTLGFPV*DYCEHHYYKYFCHA
Trigger: GGCATGACAAAAATATTTATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CCA 90 bp AATCTTAGCTGTTGTTCTCATTTTGAGTTTCTTTCTCAAGTAACATaGCAGCATTTGAGGCCTCATCTTGCTCTCCCTCAGTTAATTTCT +
Preference number: 1 (lower is better)
Translates to: NLSCCSHFEFLSQVT*QHLRPHLALPQLIS
Trigger: AGAAATTAACTGAGGGAGAGCAAGATGAGGCCTCAAATGCTGCCATGTTACTTGAGAAAGAAACTCAAAATGAGAACAACAGCTAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp CGCTGTTTTTCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCCAATCTCCTGCTCTCTaGAGGCCCACTCCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: RCFSTWRRPLSSASRTRRQSPAL*RPTPSS
Trigger: AGAGGAAGGAGTGGGCCTTCAGAGAGCAGGAGATTG...GCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CAA 90 bp CCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTaGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: PSTLLAGSFYHLHLS*SCWETPTPSKRSQG
Trigger: ACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
3UTR-3UTR GCA 90 bp CACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCTGTTCTGAACGACTCTaGCCCGGAGTAACTTTTGAA +
Preference number: 2 (lower is better)
Translates to: HLAPTTLFSLSYPPLALSCSERL*PGVTFE
Trigger: TTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACA...GCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp GCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCACCTCAGCTTGTCCTaGTGGGAGACCCCGACCCCA +
Preference number: 2 (lower is better)
Translates to: ALWTGSQTCLLVPFLPVRHLSLS*WETPTP
Trigger: TGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTG...CCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp CGCTGTTTTTCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCCTGCTGTGGTATTTCTaGCCTTTTCACTGCATCCAA +
Preference number: 2 (lower is better)
Translates to: RCFSTWRRPLSSASRTRRLLWYF*PFHCIQ
Trigger: TTGGATGCAGTGAAAAGGGCAGAAATACCACAGCAG...GCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR CCA 90 bp ACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATGAGCAGTGCACACCTTaGGAGAAGTGCAGACTATTG +
Preference number: 2 (lower is better)
Translates to: TQSGERGFPSTLLAGSFYEQCTP*EKCRLL
Trigger: CAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC...ATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp AGTGACACCTTGTGCTCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTGACACCTTGTGCTCATaGAAGTTCCTCTGCCGCTGT +
Preference number: 2 (lower is better)
Translates to: SDTLCSCKFLCRCKARVTDTLCS*KFLCRC
Trigger: ACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTC...AGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp GAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTAAAGCGTCAGTTGTGGTaGGCTGCCGGAGGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: EAEVEVLGFFEGSEGVSLKRQLW*AAGGLL
Trigger: GAGAAGCCCTCCGGCAGCTCACCACAACTGACGCTT...TAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp ACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAGCATGACAAAGGCGGACAGGATCTGACTTaGTCCAATATAGAGAATATC +
Preference number: 2 (lower is better)
Translates to: TLFSLSYPPLALSQHDKGGQDLT*SNIENI
Trigger: GATATTCTCTATATTGGAGCAAGTCAGATCCTGTCC...GCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp ATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTCTCAGCTTGTCCTGCTaGGAGACCCCGACCCCAAGT +
Preference number: 2 (lower is better)
Translates to: IGRHFQGWSWKPRLRYWVLSLSC*ETPTPS
Trigger: ACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAG...AACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp CAACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTTCAGTTGTGGTGAGCTaGCGGAGGGCTTCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: QQCLMNLCQLIVQPCCPLSVVVS*RRASLC
Trigger: ACACAGAGAAGCCCTCCGGCAGCTCACCACAACTGA...AAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp ACCCAAGACGAGACAGAGGTCCATAGACCTGTGATGCATAATCAGAATAATCCTCACCTCAGCTTGTCCTaGTGGGAGACCCCGACCCCA +
Preference number: 2 (lower is better)
Translates to: TQDETEVHRPVMHNQNNPHLSLS*WETPTP
Trigger: TGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTG...AGGATTATTCTGATTATGCATCACAGGTCTATGGACCTCTGTCTCGTCTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp CATTTCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCCACCTCAGCTTGTCCTaGTGGGAGACCCCGACCCCA +
Preference number: 2 (lower is better)
Translates to: HFIHHFPPLLKLGGVTQSHLSLS*WETPTP
Trigger: TGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTG...GCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
3UTR-3UTR GCA 90 bp ACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTCAGCCTCTTTTCCCTCCTaGAGTTTAGACCACCGGGCA +
Preference number: 2 (lower is better)
Translates to: TVPYEPLPTHSPTLLPSSASFPS*SLDHRA
Trigger: TGCCCGGTGGTCTAAACTGCAGGAGGGAAAAGAGGC...TGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp CTGATGGGCTGCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCTTTGACCTCAGCTTGTCCTGCTaGGAGACCCCGACCCCAAGT +
Preference number: 2 (lower is better)
Translates to: LMGCKNMFPLCVPHFFFDLSLSC*ETPTPS
Trigger: ACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAG...GTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp GAGAAAGTCTGCTGTTCCCAGCTGTATAGCATTCCCCTCCCACCTTCTATCCCAACACTGGCAAGTTTATaGGCAGTGCACACCTTGGGA +
Preference number: 2 (lower is better)
Translates to: EKVCCSQLYSIPLPPSIPTLASL*AVHTLG
Trigger: TCCCAAGGTGTGCACTGCTCATAAACTTGCCAGTGT...TGGGATAGAAGGTGGGAGGGGAATGCTATACAGCTGGGAACAGCAGACTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR GCA 90 bp ACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAGCATGACAAAGGCATCAATTTTATTCTCTaGTGTGGTATTTCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: TLFSLSYPPLALSQHDKGINFIL*CGISAL
Trigger: AAGGGCAGAAATACCACAGCAGAGAATAAAATTGAT...GCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR GCA 90 bp TCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTTGCTTCTCGGCTTTTAGTTTTTCAATCTCCTaGTCTCTGAAGGCCCACTCC +
Preference number: 2 (lower is better)
Translates to: SCKFLCRCKARVTCFSAFSFSIS*SLKAHS
Trigger: GGAGTGGGCCTTCAGAGAGCAGGAGATTGAAAAACT...AAAAGCCGAGAAGCAAGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp TGTTGTCTGGGAAACACCCAAGACGAGACAGAGGTCCATAGACCTGTGATGCATACACTGGCAAGTTTATaGGCAGTGCACACCTTGGGA +
Preference number: 2 (lower is better)
Translates to: CCLGNTQDETEVHRPVMHTLASL*AVHTLG
Trigger: TCCCAAGGTGTGCACTGCTCATAAACTTGCCAGTGT...ATGCATCACAGGTCTATGGACCTCTGTCTCGTCTTGGGTGTTTCCCAGACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTAGCTCAAAGGTGGGTTaGTGTGCCACTGTAGAAGCA +
Preference number: 2 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCSSKVG*CATVEA
Trigger: TGCTTCTACAGTGGCACATCAACCCACCTTTGAGCT...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR TCA 90 bp AGTGACACCTTGTGCTCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTTCAGGGATTGAGTCCTaGCATACTACATATTCTGCA +
Preference number: 2 (lower is better)
Translates to: SDTLCSCKFLCRCKARVTSGIES*HTTYSA
Trigger: TGCAGAATATGTAGTATGTCAGGACTCAATCCCTGA...AGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp TGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCCAAATTCCAGGCGAATCTCCTaGAGTTTTTCAATCTCCTGC +
Preference number: 2 (lower is better)
Translates to: WTGSQTCLLVPFLPVRPNSRRIS*SFSISC
Trigger: GCAGGAGATTGAAAAACTGCAGGAGATTCGCCTGGA...ATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp GCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGTGTTCTGAACGACTCTaGCCCGGAGTAACTTTTGAA +
Preference number: 2 (lower is better)
Translates to: ALWTGSQTCLLVPFLPVRCSERL*PGVTFE
Trigger: TTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACA...CCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp TCTCCTCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGAGCAGTGCACACCTTaGGAGAAGTGCAGACTATTG +
Preference number: 2 (lower is better)
Translates to: SPPAVSPALWTGSQTCLLEQCTP*EKCRLL
Trigger: CAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC...TAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp AGTGACACCTTGTGCTCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTATAGCACCATCTCTATaGCTGTTGCATGAACACACT +
Preference number: 2 (lower is better)
Translates to: SDTLCSCKFLCRCKARVTIAPSL*LLHEHT
Trigger: AGTGTGTTCATGCAACAGCCATAGAGATGGTGCTAT...AGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR CCA 90 bp CTGAGTTGTTGTCTGGGAAACACCCAAGACGAGACAGAGGTCCATAGACCTGTGAGGAGGAAAAGTGTATaGTTCTGCCTTGGATACGGC +
Preference number: 2 (lower is better)
Translates to: LSCCLGNTQDETEVHRPVRRKSV*FCLGYG
Trigger: GCCGTATCCAAGGCAGAACCATACACTTTTCCTCCT...CACAGGTCTATGGACCTCTGTCTCGTCTTGGGTGTTTCCCAGACAACAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp GAGCAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTAAGCGTCAGTTGTGGTaGGCTGCCGGAGGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: EQCTPWEKCRLLELFMMIKRQLW*AAGGLL
Trigger: GAGAAGCCCTCCGGCAGCTCACCACAACTGACGCTT...AATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp ACTATGGTGAACTTTAACCACCTCCTTAAATATCTCGTCCTCCTCCCGCAGGCGCAAGTTTATGAGCAGTaGACACCTTGGGAGAAGTGC +
Preference number: 2 (lower is better)
Translates to: TMVNFNHLLKYLVLLPQAQVYEQ*TPWEKC
Trigger: GCACTTCTCCCAAGGTGTGCACTGCTCATAAACTTG...CGCCTGCGGGAGGAGGACGAGATATTTAAGGAGGTGGTTAAAGTTCACCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp CAACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTGATACATGCGTGCGCTaGATTTTTGCCATTTTTGCC +
Preference number: 2 (lower is better)
Translates to: QQCLMNLCQLIVQPCCPLDTCVR*IFAIFA
Trigger: GGCAAAAATGGCAAAAATTCAGCGCACGCATGTATC...AAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp GTGGATGATCTGATGGGCTGCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTCCGAGGTTGAGGTATTaGGTTTCTTTGAAGGAAGCG +
Preference number: 2 (lower is better)
Translates to: VDDLMGCKNMFPLCVPHFPRLRY*VSLKEA
Trigger: CGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGG...AAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp GTGGATGATCTGATGGGCTGCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCCAAGGTTGGAGTTaGAAGCCGAGGTTGAGGTAT +
Preference number: 2 (lower is better)
Translates to: VDDLMGCKNMFPLCVPHFFQGWS*KPRLRY
Trigger: ATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAA...AAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp TCTCAGCCATCTTCTCTATTTCTGCCCTGGCTTGTTCTTCTGCAGTATTCGCTTCGTCATTTCCAAGGTTaGAGTTGGAAGCCGAGGTTG +
Preference number: 2 (lower is better)
Translates to: SQPSSLFLPWLVLLQYSLRHFQG*SWKPRL
Trigger: CAACCTCGGCTTCCAACTCCAACCTTGGAAATGACG...AAGCGAATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp CTTTTGAACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATAGCATGACAAAGGCATaGATCCTCCTCTCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: LLNHAFRVTVDDLMGCKNSMTKA*ILLSSC
Trigger: GCAGGAGGAGAGGAGGATCCATGCCTTTGTCATGCT...ATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CAA 90 bp TGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATaGGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTACTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: WTSFPRLELEAEVEV*GFFEGSEGVSLLQE
Trigger: TTCTTGAAGTAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CAA 90 bp TTCTTCATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTaGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTAC +
Preference number: 2 (lower is better)
Translates to: FFIGRHFQGWSWKPR*RYWVSLKEARGFLY
Trigger: GTAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp CATTTCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCACACTGGCAAGTTTATaGGCAGTGCACACCTTGGGA +
Preference number: 2 (lower is better)
Translates to: HFIHHFPPLLKLGGVTQSTLASL*AVHTLG
Trigger: TCCCAAGGTGTGCACTGCTCATAAACTTGCCAGTGT...GCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTACAATCTCCTGCTCTCTaGAGGCCCACTCCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLQSPAL*RPTPSS
Trigger: AGAGGAAGGAGTGGGCCTTCAGAGAGCAGGAGATTG...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR GCA 90 bp TCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTTGCTTCTCGGCTTTTACACCTTGGGAGAAGTaGAGACTATTGGAATTATTT +
Preference number: 2 (lower is better)
Translates to: SCKFLCRCKARVTCFSAFTPWEK*RLLELF
Trigger: AAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGT...AAAAGCCGAGAAGCAAGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp TGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCCAAATAAAAGTGTATGGTTCTaGCTTGGATACGGCATAAAC +
Preference number: 2 (lower is better)
Translates to: WTGSQTCLLVPFLPVRPNKSVWF*LGYGIN
Trigger: GTTTATGCCGTATCCAAGGCAGAACCATACACTTTT...ATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp ACTATGGTGAACTTTAACCACCTCCTTAAATATCTCGTCCTCCTCCCGCAGGCGCACCGGGCATTCAAGTaGTTCATATTCACTTCATTC +
Preference number: 2 (lower is better)
Translates to: TMVNFNHLLKYLVLLPQAHRAFK*FIFTSF
Trigger: GAATGAAGTGAATATGAAGCACTTGAATGCCCGGTG...CGCCTGCGGGAGGAGGACGAGATATTTAAGGAGGTGGTTAAAGTTCACCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp TCTCAGCCATCTTCTCTATTTCTGCCCTGGCTTGTTCTTCTGCAGTATTCGCTTCTCATAGTCCAACCTTaGTGCCCTCTTCAGAAAACC +
Preference number: 2 (lower is better)
Translates to: SQPSSLFLPWLVLLQYSLLIVQP*CPLQKT
Trigger: GGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAG...AAGCGAATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp GAGCAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTTCATGCAAGTTCCTCTaGCGCTGTAAGGCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: EQCTPWEKCRLLELFMMISCKFL*RCKARV
Trigger: GACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA...AATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTATCATGCAAGTTCCTCTaGCGCTGTAAGGCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLSCKFL*RCKARV
Trigger: GACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR CCA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTATAGCACCATCTCTATaGCTGTTGCATGAACACACT +
Preference number: 2 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCIAPSL*LLHEHT
Trigger: AGTGTGTTCATGCAACAGCCATAGAGATGGTGCTAT...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR CCA 90 bp GGGATGGATAGGTGCTTAGTAGAAGTAGGAGGAAAAGTGTATGGTTCTGCCTTGAGGAGGAAAAGTGTATaGTTCTGCCTTGGATACGGC +
Preference number: 2 (lower is better)
Translates to: GMDRCLVEVGGKVYGSALRRKSV*FCLGYG
Trigger: GCCGTATCCAAGGCAGAACCATACACTTTTCCTCCT...CAAGGCAGAACCATACACTTTTCCTCCTACTTCTACTAAGCACCTATCCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp TCTCAGCCATCTTCTCTATTTCTGCCCTGGCTTGTTCTTCTGCAGTATTCGCTTCCGAGGTTGAGGTATTaGGTTTCTTTGAAGGAAGCG +
Preference number: 2 (lower is better)
Translates to: SQPSSLFLPWLVLLQYSLPRLRY*VSLKEA
Trigger: CGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGG...AAGCGAATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp ACTATGGTGAACTTTAACCACCTCCTTAAATATCTCGTCCTCCTCCCGCAGGCGCGGCATAAACAACATTaGATGGCATCTGCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: TMVNFNHLLKYLVLLPQARHKQH*MASAEK
Trigger: TTTTTCAGCAGATGCCATTCAATGTTGTTTATGCCG...CGCCTGCGGGAGGAGGACGAGATATTTAAGGAGGTGGTTAAAGTTCACCATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp GTGGATGATCTGATGGGCTGCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTCAGGGATTGAGTCCTaGCATACTACATATTCTGCA +
Preference number: 2 (lower is better)
Translates to: VDDLMGCKNMFPLCVPHFSGIES*HTTYSA
Trigger: TGCAGAATATGTAGTATGTCAGGACTCAATCCCTGA...AAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp TGCGCAACTCCTGGATCAACTCCAGTCGCTTTTCTTTCCCTTCAAACATCATGTCAAGAGCTCAGGGATTaGGTCCTGACATACTACATA +
Preference number: 2 (lower is better)
Translates to: CATPGSTPVAFLSLQTSCQELRD*VLTYYI
Trigger: TATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTG...ACATGATGTTTGAAGGGAAAGAAAAGCGACTGGAGTTGATCCAGGAGTTGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp AACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATATGTTTGGTATTGGGTTTCTTTaGAGGAAGCGAGGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: NHAFRVTVDDLMGCKNMFGIGFL*RKRGGF
Trigger: GAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACC...AAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp TGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCCAAATACACCTTGGGAGAAGTaGAGACTATTGGAATTATTT +
Preference number: 2 (lower is better)
Translates to: WTGSQTCLLVPFLPVRPNTPWEK*RLLELF
Trigger: AAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGT...ATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp TCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCCTGCTGTGGTATTTCTaGCCTTTTCACTGCATCCAA +
Preference number: 2 (lower is better)
Translates to: SHLLSHQPNLTHLSFCVLLLWYF*PFHCIQ
Trigger: TTGGATGCAGTGAAAAGGGCAGAAATACCACAGCAG...GAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR GCA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTGGACAGGATCTGACTTaGTCCAATATAGAGAATATC +
Preference number: 2 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCGQDLT*SNIENI
Trigger: GATATTCTCTATATTGGAGCAAGTCAGATCCTGTCC...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR GCA 90 bp TCTCCTCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTAAAAAGTGTATGGTTCTaGCTTGGATACGGCATAAAC +
Preference number: 2 (lower is better)
Translates to: SPPAVSPALWTGSQTCLLKSVWF*LGYGIN
Trigger: GTTTATGCCGTATCCAAGGCAGAACCATACACTTTT...TAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp TGGGGTTGTGTCACAAAATCTGGGAGACATGACTCAAGTTCCACTAATCCTTCAAGTTTTTCAATCTCCTaGTCTCTGAAGGCCCACTCC +
Preference number: 2 (lower is better)
Translates to: WGCVTKSGRHDSSSTNPSSFSIS*SLKAHS
Trigger: GGAGTGGGCCTTCAGAGAGCAGGAGATTGAAAAACT...TGAAGGATTAGTGGAACTTGAGTCATGTCTCCCAGATTTTGTGACACAACCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp ACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTCATGTATGGTTCTGCCTTaGATACGGCATAAACAACAT +
Preference number: 2 (lower is better)
Translates to: TVPYEPLPTHSPTLLPSSCMVLP*IRHKQH
Trigger: ATGTTGTTTATGCCGTATCCAAGGCAGAACCATACA...TGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp CTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTCAGAAAACCAGCTTTGGTTTTGGAGCTCTGATTTaGGGTTGTGTCACAAAATCT +
Preference number: 2 (lower is better)
Translates to: LCQLIVQPCCPLQKTSFGFGALI*GCVTKS
Trigger: AGATTTTGTGACACAACCCCAAATCAGAGCTCCAAA...ACCAAAGCTGGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp ATCCTGAGTCATGGAATATGCACATTTTCAGCCTTAGTAGATAATGCCAATGTCTCTTCTTGTAGTGCGTaGCAGGTGCGCAACTCCTGG +
Preference number: 2 (lower is better)
Translates to: ILSHGICTFSALVDNANVSSCSA*QVRNSW
Trigger: CCAGGAGTTGCGCACCTGCCACGCACTACAAGAAGA...GACATTGGCATTATCTACTAAGGCTGAAAATGTGCATATTCCATGACTCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR CAA 90 bp TTTCCATTTCTTCTTCTTCATTGGACGTCATTTCCAAGGTTGGAGTaGGAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAG +
Preference number: 2 (lower is better)
Translates to: FPFLLLHWTSFPRLE*EAEVEVLGFFEGSE
Trigger: CTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAAGAAATGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTAACACTGGCAAGTTTATaGGCAGTGCACACCTTGGGA +
Preference number: 2 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLTLASL*AVHTLG
Trigger: TCCCAAGGTGTGCACTGCTCATAAACTTGCCAGTGT...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR TCA 90 bp CTGACATACTACATATTCTGCAGAGTATGGATCTGTTTGAACGTCAGCATCCCGCAAGAGCTCAGGGATTaGGTCCTGACATACTACATA +
Preference number: 2 (lower is better)
Translates to: LTYYIFCRVWICLNVSIPQELRD*VLTYYI
Trigger: TATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTG...CGGGATGCTGACGTTCAAACAGATCCATACTCTGCAGAATATGTAGTATGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp ACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTCAATGGTCTTTCTCACTTaGCACAATAAACAATGGATC +
Preference number: 2 (lower is better)
Translates to: TVPYEPLPTHSPTLLPSSMVFLT*HNKQWI
Trigger: GATCCATTGTTTATTGTGTCAAGTGAGAAAGACCAT...TGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482927.5
3UTR-3UTR GCA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTCTGAGTCATGGAATATaGACATTTTCAGCCTTAGTA +
Preference number: 2 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCLSHGI*TFSALV
Trigger: TACTAAGGCTGAAAATGTGCATATTCCATGACTCAG...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR GCA 90 bp TCTCCTCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTACTGAGTCATGGAATATaGACATTTTCAGCCTTAGTA +
Preference number: 2 (lower is better)
Translates to: SPPAVSPALWTGSQTCLLLSHGI*TFSALV
Trigger: TACTAAGGCTGAAAATGTGCATATTCCATGACTCAG...TAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR GCA 90 bp GCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCTTTGACAAAGTATTTTGCCTCTTTTCCCTCCTaGAGTTTAGACCACCGGGCA +
Preference number: 2 (lower is better)
Translates to: ARICFRCAFLTFSLTKYFASFPS*SLDHRA
Trigger: TGCCCGGTGGTCTAAACTGCAGGAGGGAAAAGAGGC...AAAATACTTTGTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp GAGCAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTGAGCAGTGCACACCTTaGGAGAAGTGCAGACTATTG +
Preference number: 2 (lower is better)
Translates to: EQCTPWEKCRLLELFMMIEQCTP*EKCRLL
Trigger: CAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC...AATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp TGCATGAACACACTTCTTAGATCTAAAGCTCAAAGGTGGGTTGATGTGCCACTGCTTGGGTTTCCAGTTTaGGACTATTGTGAACACCAC +
Preference number: 2 (lower is better)
Translates to: CMNTLLRSKAQRWVDVPLLGFPV*DYCEHH
Trigger: GTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAG...CAGTGGCACATCAACCCACCTTTGAGCTTTAGATCTAAGAAGTGTGTTCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR CCA 90 bp GAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTATGTATGGTTCTGCCTTaGATACGGCATAAACAACAT +
Preference number: 2 (lower is better)
Translates to: EAEVEVLGFFEGSEGVSLCMVLP*IRHKQH
Trigger: ATGTTGTTTATGCCGTATCCAAGGCAGAACCATACA...TAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTCGTCATTTCCAAGGTTaGAGTTGGAAGCCGAGGTTG +
Preference number: 2 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRRHFQG*SWKPRL
Trigger: CAACCTCGGCTTCCAACTCCAACCTTGGAAATGACG...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp GAGCAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTCATTTCCAAGGTTaGAGTTGGAAGCCGAGGTTG +
Preference number: 2 (lower is better)
Translates to: EQCTPWEKCRLLELFMMIRHFQG*SWKPRL
Trigger: CAACCTCGGCTTCCAACTCCAACCTTGGAAATGACG...AATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp TGCGTTCCTCACTTTTTCTTTGACAAAGTATTTTTGCACCTCTGGGATCAGAAACAGGTGCGCAACTCCTaGATCAACTCCAGTCGCTTT +
Preference number: 2 (lower is better)
Translates to: CVPHFFFDKVFLHLWDQKQVRNS*INSSRF
Trigger: AAAGCGACTGGAGTTGATCCAGGAGTTGCGCACCTG...TTTCTGATCCCAGAGGTGCAAAAATACTTTGTCAAAGAAAAAGTGAGGAACGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CAA 90 bp TTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTTCTTaGAAGGAAGCGAGGGGGTTTCTTTACTTCAAGAACTTTATTCTT +
Preference number: 2 (lower is better)
Translates to: FQGWSWKPRLRYWVS*KEARGFLYFKNFIL
Trigger: AAGAATAAAGTTCTTGAAGTAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp TTCTTCATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATAAGTTTTCTGATTGTTaGTACATGCGTGCGCTGAAT +
Preference number: 2 (lower is better)
Translates to: FFIGRHFQGWSWKPRLRYKFSDC*YMRALN
Trigger: ATTCAGCGCACGCATGTATCAACAATCAGAAAACTT...ATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTACAAGTTTATGAGCAGTaGACACCTTGGGAGAAGTGC +
Preference number: 2 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLQVYEQ*TPWEKC
Trigger: GCACTTCTCCCAAGGTGTGCACTGCTCATAAACTTG...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR GCA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTAAAAGGTGGGTTGATGTaGCACTGTAGAAGCAGACCA +
Preference number: 2 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLKGGLM*HCRSRP
Trigger: TGGTCTGCTTCTACAGTGGCACATCAACCCACCTTT...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR GCA 90 bp CTTCAGAAAACCAGCTTTGGTGGTAATGACTTTAGGTTTTGGAGCTCTGATTTGAGTTTTTCAATCTCCTaGTCTCTGAAGGCCCACTCC +
Preference number: 2 (lower is better)
Translates to: LQKTSFGGNDFRFWSSDLSFSIS*SLKAHS
Trigger: GGAGTGGGCCTTCAGAGAGCAGGAGATTGAAAAACT...CAAATCAGAGCTCCAAAACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTCTCATAGTCCAACCTTaGTGCCCTCTTCAGAAAACC +
Preference number: 2 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRLIVQP*CPLQKT
Trigger: GGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAG...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp GGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATATCTATGGCTGTTGCATaGACACACTTCTTAGATCTA +
Preference number: 2 (lower is better)
Translates to: GDGHLGFQFGTIVNTTTISMAVA*THFLDL
Trigger: TAGATCTAAGAAGTGTGTTCATGCAACAGCCATAGA...TATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR TCA 90 bp CTTTTGAACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATTTCCTACAAGTTTTCTaGTTGTTGATACATGCGTGC +
Preference number: 2 (lower is better)
Translates to: LLNHAFRVTVDDLMGCKNFLQVF*LLIHAC
Trigger: GCACGCATGTATCAACAATCAGAAAACTTGTAGGAA...ATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp CTTCAGAAAACCAGCTTTGGTGGTAATGACTTTAGGTTTTGGAGCTCTGATTTGGAAGGGATGGATAGGTaGTTAGTAGAAGTAGGAGGA +
Preference number: 2 (lower is better)
Translates to: LQKTSFGGNDFRFWSSDLEGMDR*LVEVGG
Trigger: TCCTCCTACTTCTACTAAGCACCTATCCATCCCTTC...CAAATCAGAGCTCCAAAACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp CTGATGGGCTGCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCTTTGACTTGTTGATACATGCGTaGGCTGAATTTTTGCCATTT +
Preference number: 2 (lower is better)
Translates to: LMGCKNMFPLCVPHFFFDLLIHA*AEFLPF
Trigger: AAATGGCAAAAATTCAGCGCACGCATGTATCAACAA...GTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp CTGATGGGCTGCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCTTTGACTTTCTTCTTCTTCATTaGACGTCATTTCCAAGGTTG +
Preference number: 2 (lower is better)
Translates to: LMGCKNMFPLCVPHFFFDFLLLH*TSFPRL
Trigger: CAACCTTGGAAATGACGTCCAATGAAGAAGAAGAAA...GTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp TATAGTTTTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATAAATCTCCTTTCTCATaGATCACACACTGGCAAGTT +
Preference number: 2 (lower is better)
Translates to: YSFLFRWRWTLGFPVWDYKSPFS*ITHWQV
Trigger: AACTTGCCAGTGTGTGATTCATGAGAAAGGAGATTT...ATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR TCA 90 bp CATATTCTGCAGAGTATGGATCTGTTTGAACGTCAGCATCCCGATAATCAGTCTAATGCCAATGTCCTGTaGATAGTGAACCAAAACTAC +
Preference number: 2 (lower is better)
Translates to: HILQSMDLFERQHPDNQSNANVL*IVNQNY
Trigger: GTAGTTTTGGTTCACTATTCACAGGACATTGGCATT...AGACTGATTATCGGGATGCTGACGTTCAAACAGATCCATACTCTGCAGAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR GCA 90 bp TTTGACAAAGTATTTTTGCACCTCTGGGATCAGAAAACTATAAACCAACTCAGCTCCAGGCGAATCTCCTaGAGTTTTTCAATCTCCTGC +
Preference number: 2 (lower is better)
Translates to: FDKVFLHLWDQKTINQLSSRRIS*SFSISC
Trigger: GCAGGAGATTGAAAAACTGCAGGAGATTCGCCTGGA...GCTGAGTTGGTTTATAGTTTTCTGATCCCAGAGGTGCAAAAATACTTTGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR GCA 90 bp GGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATATTGTTGATACATGCGTaGGCTGAATTTTTGCCATTT +
Preference number: 2 (lower is better)
Translates to: GDGHLGFQFGTIVNTTTILLIHA*AEFLPF
Trigger: AAATGGCAAAAATTCAGCGCACGCATGTATCAACAA...TATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR CCA 90 bp ATCCTGAGTCATGGAATATGCACATTTTCAGCCTTAGTAGATAATGCCAATGTCATGGAGATGGACACTTaGGTTTCCAGTTTGGGACTA +
Preference number: 2 (lower is better)
Translates to: ILSHGICTFSALVDNANVMEMDT*VSSLGL
Trigger: TAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCAT...GACATTGGCATTATCTACTAAGGCTGAAAATGTGCATATTCCATGACTCAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR CCA 90 bp GAGCAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTAGTTTTCTGTTCCGATaGAGATGGACACTTGGGTTT +
Preference number: 2 (lower is better)
Translates to: EQCTPWEKCRLLELFMMISFLFR*RWTLGF
Trigger: AAACCCAAGTGTCCATCTCCATCGGAACAGAAAACT...AATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CAA 90 bp TGTGGGATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTaGCCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTG +
Preference number: 2 (lower is better)
Translates to: CGIGHLQLTSVILIS*PIPSHPMLDHLINV
Trigger: CACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTATCCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR TCA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTAAATGCCAATGTCCTGTaGATAGTGAACCAAAACTAC +
Preference number: 2 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLNANVL*IVNQNY
Trigger: GTAGTTTTGGTTCACTATTCACAGGACATTGGCATT...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR TCA 90 bp GCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCTTTGACAAAGTATTTTGATACATGCGTGCGCTaGATTTTTGCCATTTTTGCC +
Preference number: 2 (lower is better)
Translates to: ARICFRCAFLTFSLTKYFDTCVR*IFAIFA
Trigger: GGCAAAAATGGCAAAAATTCAGCGCACGCATGTATC...AAAATACTTTGTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR TCA 90 bp ATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCTACTACAAAGTCCTCTaGGTTGTTGTCTGGGAAACA +
Preference number: 2 (lower is better)
Translates to: IGHLQLTSVILISLPIPSYYKVL*VVVWET
Trigger: TGTTTCCCAGACAACAACTCAGAGGACTTTGTAGTA...GGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR GCA 90 bp TTTGACAAAGTATTTTTGCACCTCTGGGATCAGAAAACTATAAACCAACTCAGCTGTTCTGAACGACTCTaGCCCGGAGTAACTTTTGAA +
Preference number: 2 (lower is better)
Translates to: FDKVFLHLWDQKTINQLSCSERL*PGVTFE
Trigger: TTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACA...GCTGAGTTGGTTTATAGTTTTCTGATCCCAGAGGTGCAAAAATACTTTGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CAA 90 bp CTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTaGTGTTCTCGATGGTTTATTTCAAAAGTGAATGATATAACCTTT +
Preference number: 2 (lower is better)
Translates to: LPPSIPSAQPNSLVI*CSRWFISKVNDITF
Trigger: AAAGGTTATATCATTCACTTTTGAAATAAACCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR TCA 90 bp ACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCCATCCCATGTTTCCTACTTCAGTTTCTaGAAAGACCCTTTCTTTTTG +
Preference number: 2 (lower is better)
Translates to: TANFCHFNLFAHSFPSHVSYFSF*KDPFFL
Trigger: CAAAAAGAAAGGGTCTTTTCAGAAACTGAAGTAGGA...AACATGGGATGGGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR GCA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTAACACCTTGGGAGAAGTaGAGACTATTGGAATTATTT +
Preference number: 2 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLTPWEK*RLLELF
Trigger: AAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGT...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR GCA 90 bp GCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCTTTGACAAAGTATTTTCTTCTTATCCAACAGTaGCTTATGAACCTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: ARICFRCAFLTFSLTKYFLLIQQ*LMNLCQ
Trigger: TTGGCAGAGGTTCATAAGGCACTGTTGGATAAGAAG...AAAATACTTTGTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTCTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CCA 90 bp GCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCTTTGACAAAGTATTTTAATGTAGTTACCATCTaGCCCTTCAGAGAAAGTCTG +
Preference number: 2 (lower is better)
Translates to: ARICFRCAFLTFSLTKYFNVVTI*PFRESL
Trigger: CAGACTTTCTCTGAAGGGCCAGATGGTAACTACATT...AAAATACTTTGTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTCTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR TCA 90 bp ATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCTCCTACTTCAGTTTCTaGAAAGACCCTTTCTTTTTG +
Preference number: 2 (lower is better)
Translates to: IGHLQLTSVILISLPIPSSYFSF*KDPFFL
Trigger: CAAAAAGAAAGGGTCTTTTCAGAAACTGAAGTAGGA...GGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR GCA 90 bp ATCCTGAGTCATGGAATATGCACATTTTCAGCCTTAGTAGATAATGCCAATGTCAAAACAAAATTTAGTTaGTTCCTTACTGGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: ILSHGICTFSALVDNANVKTKFS*FLTGAV
Trigger: CACTGCACCAGTAAGGAAGCAACTAAATTTTGTTTT...GACATTGGCATTATCTACTAAGGCTGAAAATGTGCATATTCCATGACTCAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CCA 72 bp CGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTaGCGCTCAGCCAGCATGACAAAGGCATGGATCCTC +
Preference number: 3 (lower is better)
Translates to: RRPLSSASRTRR*RSASMTKAWIL
Trigger: GAGGATCCATGCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp CACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCAAGTCCTCTGAGTTGTaGTCTGGGAAACACCCAAGA +
Preference number: 3 (lower is better)
Translates to: HLAPTTLFSLSYPPLALSKSSEL*SGKHPR
Trigger: TCTTGGGTGTTTCCCAGACAACAACTCAGAGGACTT...GCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR GCA 72 bp GCGGGCTCTTTCTATCATCTCCACCTCAGCTTGTCCTaGTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAG +
Preference number: 3 (lower is better)
Translates to: AGSFYHLHLSLS*WETPTPSKRSQ
Trigger: CTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTGGAGATGATAGAAAGAGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
3UTR CCA 72 bp GGCTCTTTCTATCATCTCCACCTCAGCTTGTCCTGCTaGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGT +
Preference number: 3 (lower is better)
Translates to: GSFYHLHLSLSC*ETPTPSKRSQG
Trigger: ACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTGGAGATGATAGAAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
3UTR CCA 72 bp ATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCCAAATaGTTTTCAACCAGTGACACCTTGTGCTCATGCAAG +
Preference number: 3 (lower is better)
Translates to: MSASALPSSPAK*FSTSDTLCSCK
Trigger: CTTGCATGAGCACAAGGTGTCACTGGTTGAAAACCATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp TGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCCAAATAGTTGGAAGCCGAGGTaGAGGTATTGGGTTTCTTTG +
Preference number: 3 (lower is better)
Translates to: WTGSQTCLLVPFLPVRPNSWKPR*RYWVSL
Trigger: CAAAGAAACCCAATACCTCAACCTCGGCTTCCAACT...ATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR GCA 72 bp TCACCAGCTTTTCATCTTCTTGTAGTGCGTGGCAGGTaGGCAACTCCTGGATCAACTCCAGTCGCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: SPAFHLLVVRGR*ATPGSTPVAFL
Trigger: AAGAAAAGCGACTGGAGTTGATCCAGGAGTTGCGCACCTGCCACGCACTACAAGAAGATGAAAAGCTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 72 bp ACCATCAGACCCGCAAACCCTAATGTAGTTACCATCTaGCCCTTCAGAGAAAGTCTGCTGTTCCCAGCTGTA +
Preference number: 3 (lower is better)
Translates to: TIRPANPNVVTI*PFRESLLFPAV
Trigger: TACAGCTGGGAACAGCAGACTTTCTCTGAAGGGCCAGATGGTAACTACATTAGGGTTTGCGGGTCTGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CCA 72 bp TCATCTTCTTGTAGTGCGTGGCAGGTGCGCAACTCCTaGATCAACTCCAGTCGCTTTTCTTTCCCTTCAAAC +
Preference number: 3 (lower is better)
Translates to: SSSCSAWQVRNS*INSSRFSFPSN
Trigger: GTTTGAAGGGAAAGAAAAGCGACTGGAGTTGATCCAGGAGTTGCGCACCTGCCACGCACTACAAGAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp GTGGATGATCTGATGGGCTGCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTGATGGAGATGGACACTaGGGTTTCCAGTTTGGGACT +
Preference number: 3 (lower is better)
Translates to: VDDLMGCKNMFPLCVPHFDGDGH*GFQFGT
Trigger: AGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATC...AAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR CAA 90 bp TGGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGCCTTCCCATCCCATGTaGGATCACTTAATAAATGTG +
Preference number: 3 (lower is better)
Translates to: WSWKPRLRYWVSLKEARGPSHPM*DHLINV
Trigger: CACATTTATTAAGTGATCCAACATGGGATGGGAAGG...CCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR-3UTR CAA 90 bp CTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTCAGAAAACCAGCTTTGGTAAGTCCTCTGAGTTGTaGTCTGGGAAACACCCAAGA +
Preference number: 3 (lower is better)
Translates to: LCQLIVQPCCPLQKTSFGKSSEL*SGKHPR
Trigger: TCTTGGGTGTTTCCCAGACAACAACTCAGAGGACTT...ACCAAAGCTGGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp TTCTTCTTCATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGGCCGAGGTTGAGGTATaGGGTTTCTTTGAAGGAAGC +
Preference number: 3 (lower is better)
Translates to: FFFIGRHFQGWSWKPRLRAEVEV*GFFEGS
Trigger: GCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGC...CCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR TCA 72 bp CCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATTaGGTCCTGACATACTACATATTCTGCAGAGTATGG +
Preference number: 3 (lower is better)
Translates to: PSKRSQGQELRD*VLTYYIFCRVW
Trigger: CCATACTCTGCAGAATATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR CCA 72 bp TTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATTaGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTAC +
Preference number: 3 (lower is better)
Translates to: FQGWSWKPRLRY*VSLKEARGFLY
Trigger: GTAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp TCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGATGGAGATGGACACTaGGGTTTCCAGTTTGGGACT +
Preference number: 3 (lower is better)
Translates to: SHLLSHQPNLTHLSFCVLDGDGH*GFQFGT
Trigger: AGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATC...GAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR CAA 90 bp TCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCGGGACAGGATCTGACTaGCTCCAATATAGAGAATAT +
Preference number: 3 (lower is better)
Translates to: SCSLTSSLDRKSNMSASAGTGSD*LQYREY
Trigger: ATATTCTCTATATTGGAGCAAGTCAGATCCTGTCCC...GGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp TCTCAGCCATCTTCTCTATTTCTGCCCTGGCTTGTTCTTCTGCAGTATTCGCTTGCCGAGGTTGAGGTATaGGGTTTCTTTGAAGGAAGC +
Preference number: 3 (lower is better)
Translates to: SQPSSLFLPWLVLLQYSLAEVEV*GFFEGS
Trigger: GCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGC...AAGCGAATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp TCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCTTCAGAAAACCAGCTTaGGTGGTAATGACTTTAGGT +
Preference number: 3 (lower is better)
Translates to: SCSLTSSLDRKSNMSASAFRKPA*VVMTLG
Trigger: ACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAA...GGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp CAAACATCATGTTCTGAACGACTCTGCCCCGGAGTAACTTTTGAAGGTAGATCATTTCCAAGGTTGGAGTaGGAAGCCGAGGTTGAGGTA +
Preference number: 3 (lower is better)
Translates to: QTSCSERLCPGVTFEGRSFPRLE*EAEVEV
Trigger: TACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAA...TGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR TCA 72 bp AGCGTAGCCAGGGTCAAGAGCTCAGGGATTGAGTCCTaGCATACTACATATTCTGCAGAGTATGGATCTGTT +
Preference number: 3 (lower is better)
Translates to: SVARVKSSGIES*HTTYSAEYGSV
Trigger: AACAGATCCATACTCTGCAGAATATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTGACCCTGGCTACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR GCA 72 bp ACAGTCATGTGCATTCATTTCTGTGTCATCGAGTGCTaGTCTTACCCTACAACGGCAGAGTTGAGTATGCAG +
Preference number: 3 (lower is better)
Translates to: TVMCIHFCVIEC*SYPTTAELSMQ
Trigger: CTGCATACTCAACTCTGCCGTTGTAGGGTAAGAGCAGCACTCGATGACACAGAAATGAATGCACATGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR GCA 72 bp TGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTaGTGCCCTCTTCAGAAAACCAGCTTTGGTGGTAAT +
Preference number: 3 (lower is better)
Translates to: CLMNLCQLIVQP*CPLQKTSFGGN
Trigger: ATTACCACCAAAGCTGGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR GCA 72 bp CATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTaGAAGAATATGTTTCCGCTGTGCGTTCCTCACTTT +
Preference number: 3 (lower is better)
Translates to: HAFRVTVDDLMG*KNMFPLCVPHF
Trigger: AAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 72 bp TCCTCCTGGAATCCTGATGCTTGTCAATACACAGGATaGGCAGATTGCCTTTCAATAGCACCATCTCTATGG +
Preference number: 3 (lower is better)
Translates to: SSWNPDACQYTG*ADCLSIAPSLW
Trigger: CCATAGAGATGGTGCTATTGAAAGGCAATCTGCCCATCCTGTGTATTGACAAGCATCAGGATTCCAGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR CAA 90 bp CCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGATGGGTCATTTTAATCTCTTaGCCCATTCCTTCCCATCCC +
Preference number: 3 (lower is better)
Translates to: PSIPSAQPNSLVILCSRWVILIS*PIPSHP
Trigger: GGGATGGGAAGGAATGGGCAAAGAGATTAAAATGAC...CCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR CAA 90 bp TATAAACCAACTCAGCAACAATCTCCTCTGACTGAAGATAGGTTCGGCGGCTTTACTCATAGTCCAACCTaGCTGCCCTCTTCAGAAAAC +
Preference number: 3 (lower is better)
Translates to: YKPTQQQSPLTEDRFGGFTHSPT*LPSSEN
Trigger: GTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGT...AAAGCCGCCGAACCTATCTTCAGTCAGAGGAGATTGTTGCTGAGTTGGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp AACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATATGTTTGCCGAGGTTGAGGTATaGGGTTTCTTTGAAGGAAGC +
Preference number: 3 (lower is better)
Translates to: NHAFRVTVDDLMGCKNMFAEVEV*GFFEGS
Trigger: GCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGC...AAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR TCA 72 bp ACAGTCTTTGAATCAGGAAGAATCCTCCTGGAATCCTaGTGCTTGTCAATACACAGGATGGGCAGATTGCCT +
Preference number: 3 (lower is better)
Translates to: TVFESGRILLES*CLSIHRMGRLP
Trigger: AGGCAATCTGCCCATCCTGTGTATTGACAAGCATCAGGATTCCAGGAGGATTCTTCCTGATTCAAAGACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR GCA 72 bp AACACAGTCATGTGCATTCATTTCTGTGTCATCGAGTaGTGCTCTTACCCTACAACGGCAGAGTTGAGTATG +
Preference number: 3 (lower is better)
Translates to: NTVMCIHFCVIE*CSYPTTAELSM
Trigger: CATACTCAACTCTGCCGTTGTAGGGTAAGAGCAGCACTCGATGACACAGAAATGAATGCACATGACTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR CAA 90 bp TTCTTCTTCATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTTCAGAAAACCAGCTTaGGTGGTAATGACTTTAGGT +
Preference number: 3 (lower is better)
Translates to: FFFIGRHFQGWSWKPRLRFRKPA*VVMTLG
Trigger: ACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAA...CCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp AACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATATGTTTAGTCTCACCAGCTCTTaGGACAGGAAGTCAAACATG +
Preference number: 3 (lower is better)
Translates to: NHAFRVTVDDLMGCKNMFSLTSS*DRKSNM
Trigger: CATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACT...AAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR GCA 72 bp TTTATTCTTCTTATCCAACAGTGCCTTATGAACCTCTaGCAACTCATAGTCCAACCTTGCTGCCCTCTTCAG +
Preference number: 3 (lower is better)
Translates to: FILLIQQCLMNL*QLIVQPCCPLQ
Trigger: CTGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGTTGGATAAGAAGAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 72 bp TTCTTCTTCATTGGACGTCATTTCCAAGGTTGGAGTTaGAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAG +
Preference number: 3 (lower is better)
Translates to: FFFIGRHFQGWS*KPRLRYWVSLK
Trigger: CTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 72 bp CATTTCTTCTTCTTCATTGGACGTCATTTCCAAGGTTaGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTTCT +
Preference number: 3 (lower is better)
Translates to: HFFFFIGRHFQG*SWKPRLRYWVS
Trigger: AGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAAGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR TCA 72 bp ATTTCTTTTGAACCATGCTTTCCGTGTAACTGTGGATaGTCTGATGGGCTGCAAGAATATGTTTCCGCTGTG +
Preference number: 3 (lower is better)
Translates to: ISFEPCFPCNCG*SDGLQEYVSAV
Trigger: CACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR GCA 72 bp AGCCATCTTCTCTATTTCTGCCCTGGCTTGTTCTTCTaGAGTATTCGCTTCGGTATTCAGTATTATGTCTTC +
Preference number: 3 (lower is better)
Translates to: SHLLYFCPGLFF*SIRFGIQYYVF
Trigger: GAAGACATAATACTGAATACCGAAGCGAATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 72 bp TGTAGAAGCAGACCAAAGTATAGTTTTCTGTTCCGATaGAGATGGACACTTGGGTTTCCAGTTTGGGACTAT +
Preference number: 3 (lower is better)
Translates to: CRSRPKYSFLFR*RWTLGFPVWDY
Trigger: ATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATACTTTGGTCTGCTTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CCA 72 bp TTGGTGGTAATGACTTTAGGTTTTGGAGCTCTGATTTaGGGTTGTGTCACAAAATCTGGGAGACATGACTCA +
Preference number: 3 (lower is better)
Translates to: LVVMTLGFGALI*GCVTKSGRHDS
Trigger: TGAGTCATGTCTCCCAGATTTTGTGACACAACCCCAAATCAGAGCTCCAAAACCTAAAGTCATTACCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp TGCGTTCCTCACTTTTTCTTTGACAAAGTATTTTTGCACCTCTGGGATCAGAAAAGTCTCACCAGCTCTTaGGACAGGAAGTCAAACATG +
Preference number: 3 (lower is better)
Translates to: CVPHFFFDKVFLHLWDQKSLTSS*DRKSNM
Trigger: CATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACT...TTTCTGATCCCAGAGGTGCAAAAATACTTTGTCAAAGAAAAAGTGAGGAACGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR TCA 72 bp CAGAAAACTATAAACCAACTCAGCAACAATCTCCTCTaGCTGAAGATAGGTTCGGCGGCTTTCCATTTCATA +
Preference number: 3 (lower is better)
Translates to: QKTINQLSNNLL*LKIGSAAFHFI
Trigger: TATGAAATGGAAAGCCGCCGAACCTATCTTCAGTCAGAGGAGATTGTTGCTGAGTTGGTTTATAGTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR GCA 72 bp CACTTCTTAGATCTAAAGCTCAAAGGTGGGTTGATGTaGCACTGTAGAAGCAGACCAAAGTATAGTTTTCTG +
Preference number: 3 (lower is better)
Translates to: HFLDLKLKGGLM*HCRSRPKYSFL
Trigger: CAGAAAACTATACTTTGGTCTGCTTCTACAGTGGCACATCAACCCACCTTTGAGCTTTAGATCTAAGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CCA 72 bp ATCACACACTGGCAAGTTTATGAGCAGTGCACACCTTaGGAGAAGTGCAGACTATTGGAATTATTTATGATG +
Preference number: 3 (lower is better)
Translates to: ITHWQVYEQCTP*EKCRLLELFMM
Trigger: CATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTCATAAACTTGCCAGTGTGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR-3UTR CAA 90 bp CAAACATCATGTTCTGAACGACTCTGCCCCGGAGTAACTTTTGAAGGTAGATCAATTTCTTCTTCTTCATaGGACGTCATTTCCAAGGTT +
Preference number: 3 (lower is better)
Translates to: QTSCSERLCPGVTFEGRSISSSS*DVISKV
Trigger: AACCTTGGAAATGACGTCCAATGAAGAAGAAGAAAT...TGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CCA 72 bp CTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTaGGACTATTGTGAACACCACTACTATAAATATTTT +
Preference number: 3 (lower is better)
Translates to: LFRWRWTLGFPV*DYCEHHYYKYF
Trigger: AAAATATTTATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CCA 72 bp TTGTTCTGGTTTCTTCTTCAAGAACTCCGATTGCTGTaGGATAGGTCATCTACAGCTAACTTCTGTCATTTT +
Preference number: 3 (lower is better)
Translates to: LFWFLLQELRLL*DRSSTANFCHF
Trigger: AAAATGACAGAAGTTAGCTGTAGATGACCTATCCCACAGCAATCGGAGTTCTTGAAGAAGAAACCAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR-3UTR CAA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTAATTTCTTCTTCTTCATaGGACGTCATTTCCAAGGTT +
Preference number: 3 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLISSSS*DVISKV
Trigger: AACCTTGGAAATGACGTCCAATGAAGAAGAAGAAAT...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR CCA 72 bp GCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGATaGTTTATTTCAAAAGTGAATGATATAACCTTTACC +
Preference number: 3 (lower is better)
Translates to: AQPNSLVILCSR*FISKVNDITFT
Trigger: GGTAAAGGTTATATCATTCACTTTTGAAATAAACCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR GCA 72 bp AATAAATGTGTTGCCAACATTATCAATTTTATTCTCTaGTGTGGTATTTCTGCCCTTTTCACTGCATCCAAA +
Preference number: 3 (lower is better)
Translates to: NKCVANIINFIL*CGISALFTASK
Trigger: TTTGGATGCAGTGAAAAGGGCAGAAATACCACAGCAGAGAATAAAATTGATAATGTTGGCAACACATTTATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp GTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCCACCTCAGCTTGTCCTaGTGGGAGACCCCGACCCCA +
Preference number: 4 (lower is better)
Translates to: VTQSGERGFPSTLLAGSFHLSLS*WETPTP
Trigger: TGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTG...GAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR CCA 90 bp CTGTTTTTCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGTCTCGTACCCGCCGCTaGCGCTCAGCCAGCATGACA +
Preference number: 4 (lower is better)
Translates to: LFFHLAPTTLFSLSYPPLSRTRR*RSASMT
Trigger: TGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGA...CAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATCACCTCAGCTTGTCCTaGTGGGAGACCCCGACCCCA +
Preference number: 4 (lower is better)
Translates to: CWETPTPSKRSQGQELRDHLSLS*WETPTP
Trigger: TGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTG...ATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR GCA 90 bp TCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTCACCTCAGCTTGTCCTaGTGGGAGACCCCGACCCCA +
Preference number: 4 (lower is better)
Translates to: SLRAGREASQARFSRALSHLSLS*WETPTP
Trigger: TGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTG...AGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR CCA 90 bp GTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCCTCAGCTTGTCCTGCTaGGAGACCCCGACCCCAAGT +
Preference number: 4 (lower is better)
Translates to: VTQSGERGFPSTLLAGSFLSLSC*ETPTPS
Trigger: ACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAG...GAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR GCA 90 bp CCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAAGTTTTTCAATCTCCTaGTCTCTGAAGGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: PGADHSLQPLVPAAGAQPSFSIS*SLKAHS
Trigger: GGAGTGGGCCTTCAGAGAGCAGGAGATTGAAAAACT...TGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTCCTGGGGCTCCTCGATaGTTACTGCGTGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SLRAGREASQARFSRALSPGAPR*LLRGSW
Trigger: CCATGAGCCACGCAGTAACCATCGAGGAGCCCCAGG...AGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ATCTCCACCTCAGCTTGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGCATGTGGTGAGCTaGCGGAGGGCTTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ISTSACPAGRPRPQVSVARHVVS*RRASLC
Trigger: ACACAGAGAAGCCCTCCGGCAGCTCACCACATGCCT...GGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498167.1
CDS-3UTR CCA 90 bp TCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGTCGATGGTTACTGCGTaGCTCATGGTGCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SCWETPTPSKRSQGQELRSMVTA*LMVPPL
Trigger: AAGAGGCGGCACCATGAGCCACGCAGTAACCATCGA...CCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CGCTGTTTTTCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCACACTGGCAAGTTTATaGGCAGTGCACACCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RCFSTWRRPLSSASRTRRTLASL*AVHTLG
Trigger: TCCCAAGGTGTGCACTGCTCATAAACTTGCCAGTGT...GCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp GCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATTGCCTCTTTTCCCTCCTaGAGTTTAGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: AGRPRPQVSVARVKSSGIASFPS*SLDHRA
Trigger: TGCCCGGTGGTCTAAACTGCAGGAGGGAAAAGAGGC...AATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp CTGTTTTTCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGGACACCTTGTGCTCATaGAAGTTCCTCTGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LFFHLAPTTLFSLSYPPLDTLCS*KFLCRC
Trigger: ACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTC...CAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp CTGTTTTTCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGCAGGTGCGCAACTCCTaGATCAACTCCAGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: LFFHLAPTTLFSLSYPPLQVRNS*INSSRF
Trigger: AAAGCGACTGGAGTTGATCCAGGAGTTGCGCACCTG...CAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TTGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCTCTTCTTGTAGTGCGTaGCAGGTGCGCAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSCWETPTPSKRSQGQELSSCSA*QVRNSW
Trigger: CCAGGAGTTGCGCACCTGCCACGCACTACAAGAAGA...GAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp ATCTCCACCTCAGCTTGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCCGCTGTTTTTCCACCTaGCGCCGACCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ISTSACPAGRPRPQVSVARCFST*RRPLSS
Trigger: TGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAGCG...GGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTGGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp AGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATTGAGTCCCAATCTCCTGCTCTCTaGAGGCCCACTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RPRPQVSVARVKSSGIESQSPAL*RPTPSS
Trigger: AGAGGAAGGAGTGGGCCTTCAGAGAGCAGGAGATTG...GGACTCAATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR GCA 90 bp AGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCGTCAGGCCTGGCTACTaGGTGCACGTCGCTATGGTA +
Preference number: 4 (lower is better)
Translates to: RGFPSTLLAGSFYHLHLSVRPGY*VHVAMV
Trigger: TACCATAGCGACGTGCACGCAGTAGCCAGGCCTGAC...GCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR GCA 90 bp TCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCATGCAAGTTCCTCTaGCGCTGTAAGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SERGERLPKHASRGLFLSSCKFL*RCKARV
Trigger: GACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA...TGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp GCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATTCAGGTGCGCAACTCCTaGATCAACTCCAGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: AGRPRPQVSVARVKSSGIQVRNS*INSSRF
Trigger: AAAGCGACTGGAGTTGATCCAGGAGTTGCGCACCTG...AATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TGGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGTCTCGTACCCGCCGCTaGCGCTCAGCCAGCATGACA +
Preference number: 4 (lower is better)
Translates to: WSWKPRLRYWVSLKEARGSRTRR*RSASMT
Trigger: TGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGA...CCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CAA 72 bp CTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTaGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGT +
Preference number: 4 (lower is better)
Translates to: LLAGSFYHLHLS*SCWETPTPSKR
Trigger: ACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR TCA 90 bp ACTATGGTGAACTTTAACCACCTCCTTAAATATCTCGTCCTCCTCCCGCAGGCGTCCCGGTACCGAGTTTaGGACACCTGCGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TMVNFNHLLKYLVLLPQASRYRV*DTCGWA
Trigger: GGCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGA...CGCCTGCGGGAGGAGGACGAGATATTTAAGGAGGTGGTTAAAGTTCACCATAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAGCATGACAAAGGCATGGATTCAAACATCATGTTCTaGACGACTCTGCCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: FSLSYPPLALSQHDKGMDSNIMF*TTLPRS
Trigger: ACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTGA...ATCCATGCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATAGCAACAATCTCCTCTaGCTGAAGATAGGTTCGGCG +
Preference number: 4 (lower is better)
Translates to: CWETPTPSKRSQGQELRDSNNLL*LKIGSA
Trigger: CGCCGAACCTATCTTCAGTCAGAGGAGATTGTTGCT...ATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAGCATGACAAAGGCATGGATACACTGGCAAGTTTATaGGCAGTGCACACCTTGGGA +
Preference number: 4 (lower is better)
Translates to: FSLSYPPLALSQHDKGMDTLASL*AVHTLG
Trigger: TCCCAAGGTGTGCACTGCTCATAAACTTGCCAGTGT...ATCCATGCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp AAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGTCCTGCTGTCTTTAGGCATGTGGTaGGCTGCCGGAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KHASRGLFLSSPPQLVLLSLGMW*AAGGLL
Trigger: GAGAAGCCCTCCGGCAGCTCACCACATGCCTAAAGA...CAGCAGGACAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498167.1
CDS-3UTR GCA 90 bp CTGTTTTTCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGCTCATAGTCCAACCTTaGTGCCCTCTTCAGAAAACC +
Preference number: 4 (lower is better)
Translates to: LFFHLAPTTLFSLSYPPLLIVQP*CPLQKT
Trigger: GGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAG...CAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp CCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAATTTCTTTTGAACCATaGTTTCCGTGTAACTGTGGA +
Preference number: 4 (lower is better)
Translates to: PGADHSLQPLVPAAGAQPISFEP*FPCNCG
Trigger: TCCACAGTTACACGGAAAGCATGGTTCAAAAGAAAT...TGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCACCTGCGGCTGGGCCTaGGGCTCCTCGATGGTTACT +
Preference number: 4 (lower is better)
Translates to: SCSLTSSLDRKSNMSASATCGWA*GSSMVT
Trigger: AGTAACCATCGAGGAGCCCCAGGCCCAGCCGCAGGT...GGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCCAAATCGATTGGAGGAGATGTaGCTCCCAGCCCGCGACCTC +
Preference number: 4 (lower is better)
Translates to: WTGSQTCLLVPFLPVRPNRLEEM*LPARDL
Trigger: GAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCG...ATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp GTGTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTAGGAGGAAAAGTGTATaGTTCTGCCTTGGATACGGC +
Preference number: 4 (lower is better)
Translates to: VSLRAGREASQARFSRALRRKSV*FCLGYG
Trigger: GCCGTATCCAAGGCAGAACCATACACTTTTCCTCCT...AAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR CCA 90 bp CTGTTTTTCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGTTCCAAGGTTGGAGTTaGAAGCCGAGGTTGAGGTAT +
Preference number: 4 (lower is better)
Translates to: LFFHLAPTTLFSLSYPPLFQGWS*KPRLRY
Trigger: ATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAA...CAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp GGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGTCTTCTTGTAGTGCGTaGCAGGTGCGCAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: GFPSTLLAGSFYHLHLSLSSCSA*QVRNSW
Trigger: CCAGGAGTTGCGCACCTGCCACGCACTACAAGAAGA...CAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTTCCAGTCCGGCCAAATaGTTTTCAACCAGTGACACC +
Preference number: 4 (lower is better)
Translates to: SLRAGREASQARFSRALSSSPAK*FSTSDT
Trigger: GGTGTCACTGGTTGAAAACCATTTGGCCGGACTGGA...AGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCAAGCATGACAAAGGCATaGATCCTCCTCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SERGERLPKHASRGLFLSSMTKA*ILLSSC
Trigger: GCAGGAGGAGAGGAGGATCCATGCCTTTGTCATGCT...TGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp CTAGTGCCCTTCCTTCCAGTCCGGCCAAATGGTTTTCAACCAGTGACACCTTGTTCTCGTACCCGCCGCTaGCGCTCAGCCAGCATGACA +
Preference number: 4 (lower is better)
Translates to: LVPFLPVRPNGFQPVTPCSRTRR*RSASMT
Trigger: TGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGA...ACAAGGTGTCACTGGTTGAAAACCATTTGGCCGGACTGGAAGGAAGGGCACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TTCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGTCCCGGTACCGAGTTTaGGACACCTGCGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FIHHFPPLLKLGGVTQSGSRYRV*DTCGWA
Trigger: GGCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGA...CCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CTGAGTTGTTGTCTGGGAAACACCCAAGACGAGACAGAGGTCCATAGACCTGTGAAGCGTCAGTTGTGGTaGGCTGCCGGAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSCCLGNTQDETEVHRPVKRQLW*AAGGLL
Trigger: GAGAAGCCCTCCGGCAGCTCACCACAACTGACGCTT...CACAGGTCTATGGACCTCTGTCTCGTCTTGGGTGTTTCCCAGACAACAACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGCAAGAGCTCAGGGATTaGGTCCTGACATACTACATA +
Preference number: 4 (lower is better)
Translates to: SCWETPTPSKRSQGQELRQELRD*VLTYYI
Trigger: TATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTG...CCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR TCA 90 bp AGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTCAATCTCCTGCTCTCTaGAGGCCCACTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RLPKHASRGLFLSSPPQLQSPAL*RPTPSS
Trigger: AGAGGAAGGAGTGGGCCTTCAGAGAGCAGGAGATTG...AAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR TCA 90 bp GTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCGATACATGCGTGCGCTaGATTTTTGCCATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: VTQSGERGFPSTLLAGSFDTCVR*IFAIFA
Trigger: GGCAAAAATGGCAAAAATTCAGCGCACGCATGTATC...GAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GTGTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTGATACATGCGTGCGCTaGATTTTTGCCATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: VSLRAGREASQARFSRALDTCVR*IFAIFA
Trigger: GGCAAAAATGGCAAAAATTCAGCGCACGCATGTATC...AAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp GCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCAGTTTTTCAATCTCCTaGTCTCTGAAGGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: AGREASQARFSRALSIISSFSIS*SLKAHS
Trigger: GGAGTGGGCCTTCAGAGAGCAGGAGATTGAAAAACT...GGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAGCATGACAAAGGCTGCCTTATGAACCTCTaGCAACTCATAGTCCAACCT +
Preference number: 4 (lower is better)
Translates to: TLFSLSYPPLALSQHDKGCLMNL*QLIVQP
Trigger: AGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCA...GCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAGCATGACAAAGGCTGTTCTGAACGACTCTaGCCCGGAGTAACTTTTGAA +
Preference number: 4 (lower is better)
Translates to: TLFSLSYPPLALSQHDKGCSERL*PGVTFE
Trigger: TTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACA...GCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGTAGTGCGTGGCAGGTaGGCAACTCCTGGATCAACT +
Preference number: 4 (lower is better)
Translates to: RLPKHASRGLFLSSPPQLVVRGR*ATPGST
Trigger: AGTTGATCCAGGAGTTGCGCACCTGCCACGCACTAC...AAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp GCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGTTACTGCGTGGCTCATaGTGCCGCCTCTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ALWTGSQTCLLVPFLPVRLLRGS*CRLFPP
Trigger: GGGAGGAAAGAGGCGGCACCATGAGCCACGCAGTAA...CCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp GCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCCCGAGGTTGAGGTATTaGGTTTCTTTGAAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: AGREASQARFSRALSIISPRLRY*VSLKEA
Trigger: CGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGG...GGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TTGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCCCGAGGTTGAGGTATTaGGTTTCTTTGAAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: LSCWETPTPSKRSQGQELPRLRY*VSLKEA
Trigger: CGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGG...GAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp ACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATTCCAGTCCGGCCAAATaGTTTTCAACCAGTGACACC +
Preference number: 4 (lower is better)
Translates to: TQSGERGFPSTLLAGSFYSSPAK*FSTSDT
Trigger: GGTGTCACTGGTTGAAAACCATTTGGCCGGACTGGA...ATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACTCCCGGTACCGAGTTTaGGACACCTGCGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FCSDGDGHLGFQFGTIVNSRYRV*DTCGWA
Trigger: GGCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGA...GTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp TCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTTGCTTCTCGGCTTTTCAATCTCCTGCTCTCTaGAGGCCCACTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SCKFLCRCKARVTCFSAFQSPAL*RPTPSS
Trigger: AGAGGAAGGAGTGGGCCTTCAGAGAGCAGGAGATTG...AAAAGCCGAGAAGCAAGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp AGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCCCGTGTAACTGTGGATaGTCTGATGGGCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: RGFPSTLLAGSFYHLHLSPCNCG*SDGLQE
Trigger: TTCTTGCAGCCCATCAGATCATCCACAGTTACACGG...GCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAGCATGACAAAGGCCTTCTTATCCAACAGTaGCTTATGAACCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: TLFSLSYPPLALSQHDKGLLIQQ*LMNLCQ
Trigger: TTGGCAGAGGTTCATAAGGCACTGTTGGATAAGAAG...GCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TGGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGTCATGCAAGTTCCTCTaGCGCTGTAAGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: WSWKPRLRYWVSLKEARGSCKFL*RCKARV
Trigger: GACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA...CCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp GCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCGATGATCTGATGGGCTaGAAGAATATGTTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: AGREASQARFSRALSIISDDLMG*KNMFPL
Trigger: CAGCGGAAACATATTCTTGCAGCCCATCAGATCATC...GGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCAAAAGGTGGGTTGATGTaGCACTGTAGAAGCAGACCA +
Preference number: 4 (lower is better)
Translates to: SERGERLPKHASRGLFLSKGGLM*HCRSRP
Trigger: TGGTCTGCTTCTACAGTGGCACATCAACCCACCTTT...TGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR CCA 90 bp ACTATGGTGAACTTTAACCACCTCCTTAAATATCTCGTCCTCCTCCCGCAGGCGCCTGGGGCTCCTCGATaGTTACTGCGTGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: TMVNFNHLLKYLVLLPQAPGAPR*LLRGSW
Trigger: CCATGAGCCACGCAGTAACCATCGAGGAGCCCCAGG...CGCCTGCGGGAGGAGGACGAGATATTTAAGGAGGTGGTTAAAGTTCACCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp ATGTGCATTCATTTCTGTGTCATCGAGTGCTGCTCTTACCCTACAACGGCAGAGACCTGCGGCTGGGCCTaGGGCTCCTCGATGGTTACT +
Preference number: 4 (lower is better)
Translates to: MCIHFCVIECCSYPTTAETCGWA*GSSMVT
Trigger: AGTAACCATCGAGGAGCCCCAGGCCCAGCCGCAGGT...CTCTGCCGTTGTAGGGTAAGAGCAGCACTCGATGACACAGAAATGAATGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp AGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATTGAGTCCAGGAGGAAAAGTGTATaGTTCTGCCTTGGATACGGC +
Preference number: 4 (lower is better)
Translates to: RPRPQVSVARVKSSGIESRRKSV*FCLGYG
Trigger: GCCGTATCCAAGGCAGAACCATACACTTTTCCTCCT...GGACTCAATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR CCA 90 bp CATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGGACTCAGCTTGTCCTGCTaGGAGACCCCGACCCCAAGT +
Preference number: 4 (lower is better)
Translates to: HSSFSSSSQTGRCHSERGLSLSC*ETPTPS
Trigger: ACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAG...TCCCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR CCA 90 bp AGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTCAGGTGCGCAACTCCTaGATCAACTCCAGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: RLPKHASRGLFLSSPPQLQVRNS*INSSRF
Trigger: AAAGCGACTGGAGTTGATCCAGGAGTTGCGCACCTG...AAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp ACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAGCATGACAAAGGCTCTCTATTTCTGCCCTaGCTTGTTCTTCTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: TLFSLSYPPLALSQHDKGSLFLP*LVLLQY
Trigger: ATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGA...GCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GGGGTTGTGTCACAAAATCTGGGAGACATGACTCAAGTTCCACTAATCCTTCATTCCCGGTACCGAGTTTaGGACACCTGCGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GVVSQNLGDMTQVPLILHSRYRV*DTCGWA
Trigger: GGCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGA...ATGAAGGATTAGTGGAACTTGAGTCATGTCTCCCAGATTTTGTGACACAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp ATGTGCATTCATTTCTGTGTCATCGAGTGCTGCTCTTACCCTACAACGGCAGAGAAGCGTCAGTTGTGGTaGGCTGCCGGAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: MCIHFCVIECCSYPTTAEKRQLW*AAGGLL
Trigger: GAGAAGCCCTCCGGCAGCTCACCACAACTGACGCTT...CTCTGCCGTTGTAGGGTAAGAGCAGCACTCGATGACACAGAAATGAATGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp ACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAGCATGACAAAGGCCGGCATAAACAACATTaGATGGCATCTGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: TLFSLSYPPLALSQHDKGRHKQH*MASAEK
Trigger: TTTTTCAGCAGATGCCATTCAATGTTGTTTATGCCG...GCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp ACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCAAGAGCTCAGGGATTaGGTCCTGACATACTACATA +
Preference number: 4 (lower is better)
Translates to: TQSGERGFPSTLLAGSFYQELRD*VLTYYI
Trigger: TATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTG...ATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR TCA 90 bp GTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCAGGTCCATAGACCTGTaGTGCATAATCAGAATAATC +
Preference number: 4 (lower is better)
Translates to: VTQSGERGFPSTLLAGSFRSIDL*CIIRII
Trigger: GATTATTCTGATTATGCATCACAGGTCTATGGACCT...GAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp AGTGACACCTTGTGCTCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTAGCAACAATCTCCTCTaGCTGAAGATAGGTTCGGCG +
Preference number: 4 (lower is better)
Translates to: SDTLCSCKFLCRCKARVTSNNLL*LKIGSA
Trigger: CGCCGAACCTATCTTCAGTCAGAGGAGATTGTTGCT...AGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ATGTGCATTCATTTCTGTGTCATCGAGTGCTGCTCTTACCCTACAACGGCAGAGCTCCTCGATGGTTACTaGGTGGCTCATGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: MCIHFCVIECCSYPTTAELLDGY*VAHGAA
Trigger: GGCGGCACCATGAGCCACGCAGTAACCATCGAGGAG...CTCTGCCGTTGTAGGGTAAGAGCAGCACTCGATGACACAGAAATGAATGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp GTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCGGACAGGATCTGACTTaGTCCAATATAGAGAATATC +
Preference number: 4 (lower is better)
Translates to: VTQSGERGFPSTLLAGSFGQDLT*SNIENI
Trigger: GATATTCTCTATATTGGAGCAAGTCAGATCCTGTCC...GAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp CTGTTTTTCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGAAAAGTGTATGGTTCTaGCTTGGATACGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: LFFHLAPTTLFSLSYPPLKSVWF*LGYGIN
Trigger: GTTTATGCCGTATCCAAGGCAGAACCATACACTTTT...CAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATGAAGGGATGGATAGGTaGTTAGTAGAAGTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TQSGERGFPSTLLAGSFYEGMDR*LVEVGG
Trigger: TCCTCCTACTTCTACTAAGCACCTATCCATCCCTTC...ATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR GCA 90 bp GGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGTCCAGGCGAATCTCCTaGAGTTTTTCAATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GFPSTLLAGSFYHLHLSLSRRIS*SFSISC
Trigger: GCAGGAGATTGAAAAACTGCAGGAGATTCGCCTGGA...CAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCCTGGCTTGTTCTTCTaGAGTATTCGCTTCGGTATT +
Preference number: 4 (lower is better)
Translates to: TQSGERGFPSTLLAGSFYPGLFF*SIRFGI
Trigger: AATACCGAAGCGAATACTGCAGAAGAACAAGCCAGG...ATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp GAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTAACGCGGAGGAAGGTCTaGGGCGGTCCTTACCGTACA +
Preference number: 4 (lower is better)
Translates to: EAEVEVLGFFEGSEGVSLTRRKV*GGPYRT
Trigger: TGTACGGTAAGGACCGCCGCAGACCTTCCTCCGCGT...TAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS-3UTR CCA 90 bp AGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTACCTGCGGCTGGGCCTaGGGCTCCTCGATGGTTACT +
Preference number: 4 (lower is better)
Translates to: SNTVNHNCLYMGHLNSMRTCGWA*GSSMVT
Trigger: AGTAACCATCGAGGAGCCCCAGGCCCAGCCGCAGGT...ACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CCA 90 bp AAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGGTTATCAGCACGATTGGAGGAGATGTaGCTCCCAGCCCGCGACCTC +
Preference number: 4 (lower is better)
Translates to: KPQLPVHGPFEQHAWLSARLEEM*LPARDL
Trigger: GAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCG...TGCTGATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CCA 90 bp TCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCACGAATCAGGGTAGCTTaGATATTTGCCTGTGTATGG +
Preference number: 4 (lower is better)
Translates to: SERGERLPKHASRGLFLSRIRVA*IFACVW
Trigger: CCATACACAGGCAAATATCCAAGCTACCCTGATTCG...TGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482927.5
3UTR CAA 72 bp GGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTaGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GRHFQGWSWKPR*RYWVSLKEARG
Trigger: CCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGTCCCGGTACCGAGTTTaGGACACCTGCGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: YSNTVNHNCLYMGHLNSMSRYRV*DTCGWA
Trigger: GGCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGA...CATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR TCA 90 bp TCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCAAGCGTCAGTTGTGGTaGGCTGCCGGAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SHLLSHQPNLTHLSFCVLKRQLW*AAGGLL
Trigger: GAGAAGCCCTCCGGCAGCTCACCACAACTGACGCTT...GAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp GGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGATGGTTTTCAACCAGTaGCACCTTGTGCTCATGCAA +
Preference number: 4 (lower is better)
Translates to: GFPSTLLAGSFYHLHLSLMVFNQ*HLVLMQ
Trigger: TTGCATGAGCACAAGGTGTCACTGGTTGAAAACCAT...CAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTTGCTTCTCGGCTTTTAGCAACAATCTCCTCTaGCTGAAGATAGGTTCGGCG +
Preference number: 4 (lower is better)
Translates to: SCKFLCRCKARVTCFSAFSNNLL*LKIGSA
Trigger: CGCCGAACCTATCTTCAGTCAGAGGAGATTGTTGCT...AAAAGCCGAGAAGCAAGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCAAATCTCCTTTCTCATaGATCACACACTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: AGREASQARFSRALSIISKSPFS*ITHWQV
Trigger: AACTTGCCAGTGTGTGATTCATGAGAAAGGAGATTT...GGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCACACCGGGCATTCAAGTaGTTCATATTCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: SERGERLPKHASRGLFLSHRAFK*FIFTSF
Trigger: GAATGAAGTGAATATGAAGCACTTGAATGCCCGGTG...TGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAGCATGACAAAGGCTTGTTGATACATGCGTaGGCTGAATTTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: TLFSLSYPPLALSQHDKGLLIHA*AEFLPF
Trigger: AAATGGCAAAAATTCAGCGCACGCATGTATCAACAA...GCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAAGAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGTCCTGCTGCTCATAGTCCAACCTTaGTGCCCTCTTCAGAAAACC +
Preference number: 4 (lower is better)
Translates to: KHASRGLFLSSPPQLVLLLIVQP*CPLQKT
Trigger: GGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAG...CAGCAGGACAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTGCCTTATGAACCTCTaGCAACTCATAGTCCAACCT +
Preference number: 4 (lower is better)
Translates to: RGFPSTLLAGSFYHLHLSCLMNL*QLIVQP
Trigger: AGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCA...GCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACTATGGTGAACTTTAACCACCTCCTTAAATATCTCGTCCTCCTCCCGCAGGCGGTAGTGCGTGGCAGGTaGGCAACTCCTGGATCAACT +
Preference number: 4 (lower is better)
Translates to: TMVNFNHLLKYLVLLPQAVVRGR*ATPGST
Trigger: AGTTGATCCAGGAGTTGCGCACCTGCCACGCACTAC...CGCCTGCGGGAGGAGGACGAGATATTTAAGGAGGTGGTTAAAGTTCACCATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACTATGGTGAACTTTAACCACCTCCTTAAATATCTCGTCCTCCTCCCGCAGGCGTCATGCAAGTTCCTCTaGCGCTGTAAGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TMVNFNHLLKYLVLLPQASCKFL*RCKARV
Trigger: GACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA...CGCCTGCGGGAGGAGGACGAGATATTTAAGGAGGTGGTTAAAGTTCACCATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp GGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGGATGATCTGATGGGCTaGAAGAATATGTTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: GFPSTLLAGSFYHLHLSLDDLMG*KNMFPL
Trigger: CAGCGGAAACATATTCTTGCAGCCCATCAGATCATC...CAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp CAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGTCCTGCTCAAGTTTATGAGCAGTaGACACCTTGGGAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: QARFSRALSIISTSACPAQVYEQ*TPWEKC
Trigger: GCACTTCTCCCAAGGTGTGCACTGCTCATAAACTTG...AGCAGGACAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCCTGCTGTGGTATTTCTaGCCTTTTCACTGCATCCAA +
Preference number: 4 (lower is better)
Translates to: RGFPSTLLAGSFYHLHLSLLWYF*PFHCIQ
Trigger: TTGGATGCAGTGAAAAGGGCAGAAATACCACAGCAG...GCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR CCA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTCCAGCGGGTCAGGCCTaGCTACTGCGTGCACGTCGC +
Preference number: 4 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRPAGQA*LLRARR
Trigger: GCGACGTGCACGCAGTAGCCAGGCCTGACCCGCTGG...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp CCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGATGGCCTGGGGCTCCTCGATaGTTACTGCGTGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PSIPSAQPNSLVILCSRWPGAPR*LLRGSW
Trigger: CCATGAGCCACGCAGTAACCATCGAGGAGCCCCAGG...CCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp AGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTCCTGGGGCTCCTCGATaGTTACTGCGTGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SNTVNHNCLYMGHLNSMRPGAPR*LLRGSW
Trigger: CCATGAGCCACGCAGTAACCATCGAGGAGCCCCAGG...ACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CCA 90 bp CATTTCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCACCTGCGGCTGGGCCTaGGGCTCCTCGATGGTTACT +
Preference number: 4 (lower is better)
Translates to: HFIHHFPPLLKLGGVTQSTCGWA*GSSMVT
Trigger: AGTAACCATCGAGGAGCCCCAGGCCCAGCCGCAGGT...GCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp ATTTCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGCGATTGGAGGAGATGTaGCTCCCAGCCCGCGACCTC +
Preference number: 4 (lower is better)
Translates to: ISFIIFLLFSNWEVSLRARLEEM*LPARDL
Trigger: GAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCG...CGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTTGCTTCTCGGCTTTTCGTCATTTCCAAGGTTaGAGTTGGAAGCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SCKFLCRCKARVTCFSAFRHFQG*SWKPRL
Trigger: CAACCTCGGCTTCCAACTCCAACCTTGGAAATGACG...AAAAGCCGAGAAGCAAGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TGGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGTCCAGTCCGGCCAAATaGTTTTCAACCAGTGACACC +
Preference number: 4 (lower is better)
Translates to: WSWKPRLRYWVSLKEARGSSPAK*FSTSDT
Trigger: GGTGTCACTGGTTGAAAACCATTTGGCCGGACTGGA...CCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TATCCAACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCCGCTGTTTTTCCACCTaGCGCCGACCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: YPTVPYEPLPTHSPTLLPRCFST*RRPLSS
Trigger: TGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAGCG...GGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGTTGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TCTCCTCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTACGCTGTTTTTCCACCTaGCGCCGACCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SPPAVSPALWTGSQTCLLRCFST*RRPLSS
Trigger: TGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAGCG...TAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp AGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATTGAGTCCTCTCTATTTCTGCCCTaGCTTGTTCTTCTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: RPRPQVSVARVKSSGIESSLFLP*LVLLQY
Trigger: ATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGA...GGACTCAATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTACAATCTCCTGCTCTCTaGAGGCCCACTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: EAEVEVLGFFEGSEGVSLQSPAL*RPTPSS
Trigger: AGAGGAAGGAGTGGGCCTTCAGAGAGCAGGAGATTG...TAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACTTCCTACAAGTTTTCTaGTTGTTGATACATGCGTGC +
Preference number: 4 (lower is better)
Translates to: GERGFPSTLLAGSFYHLHFLQVF*LLIHAC
Trigger: GCACGCATGTATCAACAATCAGAAAACTTGTAGGAA...GTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CTAGTGCCCTTCCTTCCAGTCCGGCCAAATGGTTTTCAACCAGTGACACCTTGTGGTATTGGGTTTCTTTaGAGGAAGCGAGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LVPFLPVRPNGFQPVTPCGIGFL*RKRGGF
Trigger: GAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACC...ACAAGGTGTCACTGGTTGAAAACCATTTGGCCGGACTGGAAGGAAGGGCACTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp AGTGACACCTTGTGCTCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTATGGTTTTCAACCAGTaGCACCTTGTGCTCATGCAA +
Preference number: 4 (lower is better)
Translates to: SDTLCSCKFLCRCKARVTMVFNQ*HLVLMQ
Trigger: TTGCATGAGCACAAGGTGTCACTGGTTGAAAACCAT...AGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCCATAAGCAATGTCATTaGTTTTCTCAGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: AGREASQARFSRALSIISHKQCH*FSQPSS
Trigger: AGAAGATGGCTGAGAAAATCAATGACATTGCTTATG...GGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TTCAGCCTCTCGTACCCGCCGCTGGCGCTCAGCCAGCATGACAAAGGCATGGATCATAAGCAATGTCATTaGTTTTCTCAGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: FSLSYPPLALSQHDKGMDHKQCH*FSQPSS
Trigger: AGAAGATGGCTGAGAAAATCAATGACATTGCTTATG...ATCCATGCCTTTGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGAGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGTCAGGCCTGGCTACTaGGTGCACGTCGCTATGGTA +
Preference number: 4 (lower is better)
Translates to: SHLLSHQPNLTHLSFCVLVRPGY*VHVAMV
Trigger: TACCATAGCGACGTGCACGCAGTAGCCAGGCCTGAC...GAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp TATAAACCAACTCAGCAACAATCTCCTCTGACTGAAGATAGGTTCGGCGGCTTTCTCCTCGATGGTTACTaGGTGGCTCATGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: YKPTQQQSPLTEDRFGGFLLDGY*VAHGAA
Trigger: GGCGGCACCATGAGCCACGCAGTAACCATCGAGGAG...AAAGCCGCCGAACCTATCTTCAGTCAGAGGAGATTGTTGCTGAGTTGGTTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TGGATCTGTTTGAACGTCAGCATCCCGATAATCAGTCTGAGTGCCCACAGTAGAGCCTCTTTTCCCTCCTaGAGTTTAGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: WICLNVSIPIISLSAHSRASFPS*SLDHRA
Trigger: TGCCCGGTGGTCTAAACTGCAGGAGGGAAAAGAGGC...TCTACTGTGGGCACTCAGACTGATTATCGGGATGCTGACGTTCAAACAGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTGACACCTTGTGCTCATaGAAGTTCCTCTGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCDTLCS*KFLCRC
Trigger: ACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTC...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCCCAGCGGGTCAGGCCTaGCTACTGCGTGCACGTCGC +
Preference number: 4 (lower is better)
Translates to: IGHLQLTSVILISLPIPSPAGQA*LLRARR
Trigger: GCGACGTGCACGCAGTAGCCAGGCCTGACCCGCTGG...GGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp TTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACTTACTGCGTGGCTCATaGTGCCGCCTCTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: FCSDGDGHLGFQFGTIVNLLRGS*CRLFPP
Trigger: GGGAGGAAAGAGGCGGCACCATGAGCCACGCAGTAA...GTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp AGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTTTACTGCGTGGCTCATaGTGCCGCCTCTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SNTVNHNCLYMGHLNSMRLLRGS*CRLFPP
Trigger: GGGAGGAAAGAGGCGGCACCATGAGCCACGCAGTAA...ACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CCA 90 bp TTCTTCTTCATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTCGATGGTTACTGCGTaGCTCATGGTGCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: FFFIGRHFQGWSWKPRLRSMVTA*LMVPPL
Trigger: AAGAGGCGGCACCATGAGCCACGCAGTAACCATCGA...CCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCCAAATAATCATACGCTCGATTaGAGGAGATGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WTGSQTCLLVPFLPVRPNNHTLD*RRCGSQ
Trigger: CTGGGAGCCACATCTCCTCCAATCGAGCGTATGATT...ATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp AGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCTGTATGGTTCTGCCTTaGATACGGCATAAACAACAT +
Preference number: 4 (lower is better)
Translates to: SGERGFPSTLLAGSFYHLCMVLP*IRHKQH
Trigger: ATGTTGTTTATGCCGTATCCAAGGCAGAACCATACA...GAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR CCA 90 bp CTTTTGAACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATCTCAGCTTGTCCTGCTaGGAGACCCCGACCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LLNHAFRVTVDDLMGCKNLSLSC*ETPTPS
Trigger: ACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAG...ATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TATAGTTTTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTCTCGTACCCGCCGCTaGCGCTCAGCCAGCATGACA +
Preference number: 4 (lower is better)
Translates to: YSFLFRWRWTLGFPVWDYSRTRR*RSASMT
Trigger: TGTCATGCTGGCTGAGCGCCAGCGGCGGGTACGAGA...ATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp GTGTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTGTATTTTTGCACCTCTaGGATCAGAAAACTATAAAC +
Preference number: 4 (lower is better)
Translates to: VSLRAGREASQARFSRALVFLHL*DQKTIN
Trigger: GTTTATAGTTTTCTGATCCCAGAGGTGCAAAAATAC...AAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp GAGAAAGTCTGCTGTTCCCAGCTGTATAGCATTCCCCTCCCACCTTCTATCCCAGAGCAGTGCACACCTTaGGAGAAGTGCAGACTATTG +
Preference number: 4 (lower is better)
Translates to: EKVCCSQLYSIPLPPSIPEQCTP*EKCRLL
Trigger: CAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC...TGGGATAGAAGGTGGGAGGGGAATGCTATACAGCTGGGAACAGCAGACTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp TATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGAAGCGTCAGTTGTGGTaGGCTGCCGGAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: YSNTVNHNCLYMGHLNSMKRQLW*AAGGLL
Trigger: GAGAAGCCCTCCGGCAGCTCACCACAACTGACGCTT...CATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR TCA 90 bp AAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGTCCTGCTGTCAGGGATTGAGTCCTaGCATACTACATATTCTGCA +
Preference number: 4 (lower is better)
Translates to: KHASRGLFLSSPPQLVLLSGIES*HTTYSA
Trigger: TGCAGAATATGTAGTATGTCAGGACTCAATCCCTGA...CAGCAGGACAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR TCA 90 bp GCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCAAGAGCTCAGGGATTaGGTCCTGACATACTACATA +
Preference number: 4 (lower is better)
Translates to: ALWTGSQTCLLVPFLPVRQELRD*VLTYYI
Trigger: TATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTG...CCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp AGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTCCTACAAGTTTTCTaGTTGTTGATACATGCGTGC +
Preference number: 4 (lower is better)
Translates to: RGFPSTLLAGSFYHLHLSFLQVF*LLIHAC
Trigger: GCACGCATGTATCAACAATCAGAAAACTTGTAGGAA...GCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGGAGGTATTGGGTTTCTTTaGAGGAAGCGAGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: HSSFSSSSQTGRCHSERGGIGFL*RKRGGF
Trigger: GAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACC...TCCCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGGTTATCAGCATCAGTTGTGGTGAGCTaGCGGAGGGCTTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KPQLPVHGPFEQHAWLSASVVVS*RRASLC
Trigger: ACACAGAGAAGCCCTCCGGCAGCTCACCACAACTGA...TGCTGATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR GCA 90 bp CTGATGGGCTGCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCTTTGACTCAGTTGTGGTGAGCTaGCGGAGGGCTTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LMGCKNMFPLCVPHFFFDSVVVS*RRASLC
Trigger: ACACAGAGAAGCCCTCCGGCAGCTCACCACAACTGA...GTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCAAAAGTGTATGGTTCTaGCTTGGATACGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: RGFPSTLLAGSFYHLHLSKSVWF*LGYGIN
Trigger: GTTTATGCCGTATCCAAGGCAGAACCATACACTTTT...GCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR GCA 90 bp TCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTTGCTTCTCGGCTTTTGAAGGGATGGATAGGTaGTTAGTAGAAGTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SCKFLCRCKARVTCFSAFEGMDR*LVEVGG
Trigger: TCCTCCTACTTCTACTAAGCACCTATCCATCCCTTC...AAAAGCCGAGAAGCAAGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCTTGTTGATACATGCGTaGGCTGAATTTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: SGERGFPSTLLAGSFYHLLLIHA*AEFLPF
Trigger: AAATGGCAAAAATTCAGCGCACGCATGTATCAACAA...GAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTCTTCTTATCCAACAGTaGCTTATGAACCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: RLPKHASRGLFLSSPPQLLLIQQ*LMNLCQ
Trigger: TTGGCAGAGGTTCATAAGGCACTGTTGGATAAGAAG...AAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AGGAAGAATCCTCCTGGAATCCTGATGCTTGTCAATACACAGGATGGGCAGATTGTAGTGCGTGGCAGGTaGGCAACTCCTGGATCAACT +
Preference number: 4 (lower is better)
Translates to: RKNPPGILMLVNTQDGQIVVRGR*ATPGST
Trigger: AGTTGATCCAGGAGTTGCGCACCTGCCACGCACTAC...AATCTGCCCATCCTGTGTATTGACAAGCATCAGGATTCCAGGAGGATTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp TCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCAAATATGTTTCCGCTGTaGGTTCCTCACTTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SERGERLPKHASRGLFLSNMFPL*VPHFFF
Trigger: AAAGAAAAAGTGAGGAACGCACAGCGGAAACATATT...TGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATTGAGTCCACACCTTGGGAGAAGTaGAGACTATTGGAATTATTT +
Preference number: 4 (lower is better)
Translates to: RPRPQVSVARVKSSGIESTPWEK*RLLELF
Trigger: AAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGT...GGACTCAATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ATCTCCACCTCAGCTTGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAAAACAAAATTTAGTTaGTTCCTTACTGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ISTSACPAGRPRPQVSVAKTKFS*FLTGAV
Trigger: CACTGCACCAGTAAGGAAGCAACTAAATTTTGTTTT...GGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR CCA 90 bp TTTTCTCAGTCTGCTGCGAATCAGGGTAGCTTGGATATTTGCCTGTGTATGGTCTCGATGGTTACTGCGTaGCTCATGGTGCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: FSQSAANQGSLDICLCMVSMVTA*LMVPPL
Trigger: AAGAGGCGGCACCATGAGCCACGCAGTAACCATCGA...GACCATACACAGGCAAATATCCAAGCTACCCTGATTCGCAGCAGACTGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS-3UTR CCA 90 bp ACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCCATCCCATGTTACCTGCGGCTGGGCCTaGGGCTCCTCGATGGTTACT +
Preference number: 4 (lower is better)
Translates to: TANFCHFNLFAHSFPSHVTCGWA*GSSMVT
Trigger: AGTAACCATCGAGGAGCCCCAGGCCCAGCCGCAGGT...AACATGGGATGGGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp TATAGTTTTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATCTCAGCTTGTCCTGCTaGGAGACCCCGACCCCAAGT +
Preference number: 4 (lower is better)
Translates to: YSFLFRWRWTLGFPVWDYLSLSC*ETPTPS
Trigger: ACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAG...ATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp GGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACTTTCTTCTTCTTCATTaGACGTCATTTCCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GERGFPSTLLAGSFYHLHFLLLH*TSFPRL
Trigger: CAACCTTGGAAATGACGTCCAATGAAGAAGAAGAAA...GTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp CCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGATGGCGCTGTTTTTCCACCTaGCGCCGACCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PSIPSAQPNSLVILCSRWRCFST*RRPLSS
Trigger: TGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAGCG...CCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ATCTCCACCTCAGCTTGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCGTATTTTTGCACCTCTaGGATCAGAAAACTATAAAC +
Preference number: 4 (lower is better)
Translates to: ISTSACPAGRPRPQVSVAVFLHL*DQKTIN
Trigger: GTTTATAGTTTTCTGATCCCAGAGGTGCAAAAATAC...GGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTGGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTGAGCAGTGCACACCTTaGGAGAAGTGCAGACTATTG +
Preference number: 4 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCEQCTP*EKCRLL
Trigger: CAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTCAGAGCAGTGCACACCTTaGGAGAAGTGCAGACTATTG +
Preference number: 4 (lower is better)
Translates to: TVPYEPLPTHSPTLLPSSEQCTP*EKCRLL
Trigger: CAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC...TGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp AGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTCGGCATAAACAACATTaGATGGCATCTGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: RLPKHASRGLFLSSPPQLRHKQH*MASAEK
Trigger: TTTTTCAGCAGATGCCATTCAATGTTGTTTATGCCG...AAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR TCA 90 bp GGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATACAATCTCCTGCTCTCTaGAGGCCCACTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GDGHLGFQFGTIVNTTTIQSPAL*RPTPSS
Trigger: AGAGGAAGGAGTGGGCCTTCAGAGAGCAGGAGATTG...TATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp CAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGTCCTGCTAGGTCCATAGACCTGTaGTGCATAATCAGAATAATC +
Preference number: 4 (lower is better)
Translates to: QARFSRALSIISTSACPARSIDL*CIIRII
Trigger: GATTATTCTGATTATGCATCACAGGTCTATGGACCT...AGCAGGACAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TTCTTCTTCATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGCCGTGTAACTGTGGATaGTCTGATGGGCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: FFFIGRHFQGWSWKPRLRPCNCG*SDGLQE
Trigger: TTCTTGCAGCCCATCAGATCATCCACAGTTACACGG...CCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TGGATCTGTTTGAACGTCAGCATCCCGATAATCAGTCTGAGTGCCCACAGTAGACCGTGTAACTGTGGATaGTCTGATGGGCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: WICLNVSIPIISLSAHSRPCNCG*SDGLQE
Trigger: TTCTTGCAGCCCATCAGATCATCCACAGTTACACGG...TCTACTGTGGGCACTCAGACTGATTATCGGGATGCTGACGTTCAAACAGATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp AAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGTCCTGCTGAAATCTCCTTTCTCATaGATCACACACTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: KHASRGLFLSSPPQLVLLKSPFS*ITHWQV
Trigger: AACTTGCCAGTGTGTGATTCATGAGAAAGGAGATTT...CAGCAGGACAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp AGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTTCTATGGCTGTTGCATaGACACACTTCTTAGATCTA +
Preference number: 4 (lower is better)
Translates to: RLPKHASRGLFLSSPPQLSMAVA*THFLDL
Trigger: TAGATCTAAGAAGTGTGTTCATGCAACAGCCATAGA...AAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR GCA 90 bp TTATATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCCTCCTCGATGGTTACTaGGTGGCTCATGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LYSNTVNHNCLYMGHLNSLLDGY*VAHGAA
Trigger: GGCGGCACCATGAGCCACGCAGTAACCATCGAGGAG...GCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR GCA 90 bp ATTTCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGTCAGTTGTGGTGAGCTaGCGGAGGGCTTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ISFIIFLLFSNWEVSLRASVVVS*RRASLC
Trigger: ACACAGAGAAGCCCTCCGGCAGCTCACCACAACTGA...CGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AGTGACACCTTGTGCTCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTAAAAGTGTATGGTTCTaGCTTGGATACGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: SDTLCSCKFLCRCKARVTKSVWF*LGYGIN
Trigger: GTTTATGCCGTATCCAAGGCAGAACCATACACTTTT...AGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTCAAGTTTTTCAATCTCCTaGTCTCTGAAGGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: TVPYEPLPTHSPTLLPSSSFSIS*SLKAHS
Trigger: GGAGTGGGCCTTCAGAGAGCAGGAGATTGAAAAACT...TGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp GGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATAGCCTCTTTTCCCTCCTaGAGTTTAGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: GDGHLGFQFGTIVNTTTIASFPS*SLDHRA
Trigger: TGCCCGGTGGTCTAAACTGCAGGAGGGAAAAGAGGC...TATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp CCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGATGGGACACCTTGTGCTCATaGAAGTTCCTCTGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: PSIPSAQPNSLVILCSRWDTLCS*KFLCRC
Trigger: ACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTC...CCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp TGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCCAAATCCTGGCTTGTTCTTCTaGAGTATTCGCTTCGGTATT +
Preference number: 4 (lower is better)
Translates to: WTGSQTCLLVPFLPVRPNPGLFF*SIRFGI
Trigger: AATACCGAAGCGAATACTGCAGAAGAACAAGCCAGG...ATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCGATGATCTGATGGGCTaGAAGAATATGTTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: SCSLTSSLDRKSNMSASADDLMG*KNMFPL
Trigger: CAGCGGAAACATATTCTTGCAGCCCATCAGATCATC...GGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCATCAATTTTATTCTCTaGTGTGGTATTTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SGERGFPSTLLAGSFYHLINFIL*CGISAL
Trigger: AAGGGCAGAAATACCACAGCAGAGAATAAAATTGAT...GAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR CCA 90 bp GAGCAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCCTGGGGCTCCTCGATaGTTACTGCGTGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: EQCTPWEKCRLLELFMMIPGAPR*LLRGSW
Trigger: CCATGAGCCACGCAGTAACCATCGAGGAGCCCCAGG...AATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp ACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTACAGCTTCCGATTGGAGGAGATGTaGCTCCCAGCCCGCGACCTC +
Preference number: 4 (lower is better)
Translates to: TLGEVQTIGIIYDDSYSFRLEEM*LPARDL
Trigger: GAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCG...GAAGCTGTACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTCTCAGCTTGTCCTGCTaGGAGACCCCGACCCCAAGT +
Preference number: 4 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRLSLSC*ETPTPS
Trigger: ACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAG...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp AGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTTTTGGAGCTCTGATTTaGGGTTGTGTCACAAAATCT +
Preference number: 4 (lower is better)
Translates to: RLPKHASRGLFLSSPPQLFGALI*GCVTKS
Trigger: AGATTTTGTGACACAACCCCAAATCAGAGCTCCAAA...AAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp CTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTCAGAAAACCAGCTTTGGTTTCCAAGGTTGGAGTTaGAAGCCGAGGTTGAGGTAT +
Preference number: 4 (lower is better)
Translates to: LCQLIVQPCCPLQKTSFGFQGWS*KPRLRY
Trigger: ATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAA...ACCAAAGCTGGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp AGGAAGAATCCTCCTGGAATCCTGATGCTTGTCAATACACAGGATGGGCAGATTCAGGTGCGCAACTCCTaGATCAACTCCAGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: RKNPPGILMLVNTQDGQIQVRNS*INSSRF
Trigger: AAAGCGACTGGAGTTGATCCAGGAGTTGCGCACCTG...AATCTGCCCATCCTGTGTATTGACAAGCATCAGGATTCCAGGAGGATTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp TGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATTCTTCTTGTAGTGCGTaGCAGGTGCGCAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: WRWTLGFPVWDYCEHHYYSSCSA*QVRNSW
Trigger: CCAGGAGTTGCGCACCTGCCACGCACTACAAGAAGA...ATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp TTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACAGCATGACAAAGGCATaGATCCTCCTCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FCSDGDGHLGFQFGTIVNSMTKA*ILLSSC
Trigger: GCAGGAGGAGAGGAGGATCCATGCCTTTGTCATGCT...GTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp GTGGATGATCTGATGGGCTGCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTGAGCAGTGCACACCTTaGGAGAAGTGCAGACTATTG +
Preference number: 4 (lower is better)
Translates to: VDDLMGCKNMFPLCVPHFEQCTP*EKCRLL
Trigger: CAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC...AAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CTAGTGCCCTTCCTTCCAGTCCGGCCAAATGGTTTTCAACCAGTGACACCTTGTTCAGGGATTGAGTCCTaGCATACTACATATTCTGCA +
Preference number: 4 (lower is better)
Translates to: LVPFLPVRPNGFQPVTPCSGIES*HTTYSA
Trigger: TGCAGAATATGTAGTATGTCAGGACTCAATCCCTGA...ACAAGGTGTCACTGGTTGAAAACCATTTGGCCGGACTGGAAGGAAGGGCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGAAGTTTTCTGATTGTTaGTACATGCGTGCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: ALWTGSQTCLLVPFLPVRKFSDC*YMRALN
Trigger: ATTCAGCGCACGCATGTATCAACAATCAGAAAACTT...CCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCTACTACAAAGTCCTCTaGGTTGTTGTCTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: SCSLTSSLDRKSNMSASAYYKVL*VVVWET
Trigger: TGTTTCCCAGACAACAACTCAGAGGACTTTGTAGTA...GGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GGAAACACCCAAGACGAGACAGAGGTCCATAGACCTGTGATGCATAATCAGAATTCAAACATCATGTTCTaGACGACTCTGCCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: GNTQDETEVHRPVMHNQNSNIMF*TTLPRS
Trigger: ACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTGA...ATTCTGATTATGCATCACAGGTCTATGGACCTCTGTCTCGTCTTGGGTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GGAAACACCCAAGACGAGACAGAGGTCCATAGACCTGTGATGCATAATCAGAATACACTGGCAAGTTTATaGGCAGTGCACACCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GNTQDETEVHRPVMHNQNTLASL*AVHTLG
Trigger: TCCCAAGGTGTGCACTGCTCATAAACTTGCCAGTGT...ATTCTGATTATGCATCACAGGTCTATGGACCTCTGTCTCGTCTTGGGTGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCGGTAGCTTGGATATTTaGCTGTGTATGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SCSLTSSLDRKSNMSASAGSLDI*LCMVFL
Trigger: GAGAAAGACCATACACAGGCAAATATCCAAGCTACC...GGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS-3UTR GCA 90 bp CAAACATCATGTTCTGAACGACTCTGCCCCGGAGTAACTTTTGAAGGTAGATCAGACACCTTGTGCTCATaGAAGTTCCTCTGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: QTSCSERLCPGVTFEGRSDTLCS*KFLCRC
Trigger: ACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTC...TGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp GGGATGGATAGGTGCTTAGTAGAAGTAGGAGGAAAAGTGTATGGTTCTGCCTTGAATCATACGCTCGATTaGAGGAGATGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GMDRCLVEVGGKVYGSALNHTLD*RRCGSQ
Trigger: CTGGGAGCCACATCTCCTCCAATCGAGCGTATGATT...CAAGGCAGAACCATACACTTTTCCTCCTACTTCTACTAAGCACCTATCCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TTCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGAGGAGGAAAAGTGTATaGTTCTGCCTTGGATACGGC +
Preference number: 4 (lower is better)
Translates to: FIHHFPPLLKLGGVTQSGRRKSV*FCLGYG
Trigger: GCCGTATCCAAGGCAGAACCATACACTTTTCCTCCT...CCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR CCA 90 bp TCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTTGCTTCTCGGCTTTTTTTGGAGCTCTGATTTaGGGTTGTGTCACAAAATCT +
Preference number: 4 (lower is better)
Translates to: SCKFLCRCKARVTCFSAFFGALI*GCVTKS
Trigger: AGATTTTGTGACACAACCCCAAATCAGAGCTCCAAA...AAAAGCCGAGAAGCAAGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp AACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATATGTTTTCTTCTTGTAGTGCGTaGCAGGTGCGCAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: NHAFRVTVDDLMGCKNMFSSCSA*QVRNSW
Trigger: CCAGGAGTTGCGCACCTGCCACGCACTACAAGAAGA...AAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TATAAACCAACTCAGCAACAATCTCCTCTGACTGAAGATAGGTTCGGCGGCTTTAGCATGACAAAGGCATaGATCCTCCTCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: YKPTQQQSPLTEDRFGGFSMTKA*ILLSSC
Trigger: GCAGGAGGAGAGGAGGATCCATGCCTTTGTCATGCT...AAAGCCGCCGAACCTATCTTCAGTCAGAGGAGATTGTTGCTGAGTTGGTTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCCAAATCTTTCTCAAGTAACATaGCAGCATTTGAGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: WTGSQTCLLVPFLPVRPNLSQVT*QHLRPH
Trigger: ATGAGGCCTCAAATGCTGCCATGTTACTTGAGAAAG...ATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTATGGAGATGGACACTTaGGTTTCCAGTTTGGGACTA +
Preference number: 4 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCMEMDT*VSSLGL
Trigger: TAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCAT...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp TTCTTCATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATAATAAACAATGGATCTaGCCTAGGAGGCGACGGACG +
Preference number: 4 (lower is better)
Translates to: FFIGRHFQGWSWKPRLRYNKQWI*PRRRRT
Trigger: CGTCCGTCGCCTCCTAGGCCAGATCCATTGTTTATT...ATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS-3UTR TCA 90 bp CTAGTGCCCTTCCTTCCAGTCCGGCCAAATGGTTTTCAACCAGTGACACCTTGTCGGCATAAACAACATTaGATGGCATCTGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LVPFLPVRPNGFQPVTPCRHKQH*MASAEK
Trigger: TTTTTCAGCAGATGCCATTCAATGTTGTTTATGCCG...ACAAGGTGTCACTGGTTGAAAACCATTTGGCCGGACTGGAAGGAAGGGCACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CTGAGTTGTTGTCTGGGAAACACCCAAGACGAGACAGAGGTCCATAGACCTGTGATATTCACTTCATTCTaGTTCTCTTCACGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LSCCLGNTQDETEVHRPVIFTSF*FSSRFL
Trigger: GAGGAAGCGTGAAGAGAATCAGAATGAAGTGAATAT...CACAGGTCTATGGACCTCTGTCTCGTCTTGGGTGTTTCCCAGACAACAACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GGGGTTGTGTCACAAAATCTGGGAGACATGACTCAAGTTCCACTAATCCTTCATGGTATTGGGTTTCTTTaGAGGAAGCGAGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GVVSQNLGDMTQVPLILHGIGFL*RKRGGF
Trigger: GAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACC...ATGAAGGATTAGTGGAACTTGAGTCATGTCTCCCAGATTTTGTGACACAACCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATAGCAACAATCTCCTCTaGCTGAAGATAGGTTCGGCG +
Preference number: 4 (lower is better)
Translates to: WRWTLGFPVWDYCEHHYYSNNLL*LKIGSA
Trigger: CGCCGAACCTATCTTCAGTCAGAGGAGATTGTTGCT...ATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp TCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTAGTGCCAATGCCAATGTCCTGTaGATAGTGAACCAAAACTAC +
Preference number: 4 (lower is better)
Translates to: SCSLTSSLDRKSNMSASANANVL*IVNQNY
Trigger: GTAGTTTTGGTTCACTATTCACAGGACATTGGCATT...GGCACTAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR GCA 90 bp GAGAAAGTCTGCTGTTCCCAGCTGTATAGCATTCCCCTCCCACCTTCTATCCCAGGACAGGATCTGACTTaGTCCAATATAGAGAATATC +
Preference number: 4 (lower is better)
Translates to: EKVCCSQLYSIPLPPSIPGQDLT*SNIENI
Trigger: GATATTCTCTATATTGGAGCAAGTCAGATCCTGTCC...TGGGATAGAAGGTGGGAGGGGAATGCTATACAGCTGGGAACAGCAGACTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp TTCCAGTTTGGGACTATTGTGAACACCACTACTATAAATATTTTTGTCATGCCTCACCTCAGCTTGTCCTaGTGGGAGACCCCGACCCCA +
Preference number: 4 (lower is better)
Translates to: FQFGTIVNTTTINIFVMPHLSLS*WETPTP
Trigger: TGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTG...AGGCATGACAAAAATATTTATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp TCTCAGCCATCTTCTCTATTTCTGCCCTGGCTTGTTCTTCTGCAGTATTCGCTTTCCAGGCGAATCTCCTaGAGTTTTTCAATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SQPSSLFLPWLVLLQYSLSRRIS*SFSISC
Trigger: GCAGGAGATTGAAAAACTGCAGGAGATTCGCCTGGA...AAGCGAATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp GTGGATGATCTGATGGGCTGCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTGCCTTATGAACCTCTaGCAACTCATAGTCCAACCT +
Preference number: 4 (lower is better)
Translates to: VDDLMGCKNMFPLCVPHFCLMNL*QLIVQP
Trigger: AGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCA...AAAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TCTCCTCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTACTTCTTATCCAACAGTaGCTTATGAACCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SPPAVSPALWTGSQTCLLLLIQQ*LMNLCQ
Trigger: TTGGCAGAGGTTCATAAGGCACTGTTGGATAAGAAG...TAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp GAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTATGTTCTGAACGACTCTaGCCCGGAGTAACTTTTGAA +
Preference number: 4 (lower is better)
Translates to: EAEVEVLGFFEGSEGVSLCSERL*PGVTFE
Trigger: TTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACA...TAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ATGTGCATTCATTTCTGTGTCATCGAGTGCTGCTCTTACCCTACAACGGCAGAGCTGCTGTGGTATTTCTaGCCTTTTCACTGCATCCAA +
Preference number: 4 (lower is better)
Translates to: MCIHFCVIECCSYPTTAELLWYF*PFHCIQ
Trigger: TTGGATGCAGTGAAAAGGGCAGAAATACCACAGCAG...CTCTGCCGTTGTAGGGTAAGAGCAGCACTCGATGACACAGAAATGAATGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp TTATATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCTCGATGGTTACTGCGTaGCTCATGGTGCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LYSNTVNHNCLYMGHLNSSMVTA*LMVPPL
Trigger: AAGAGGCGGCACCATGAGCCACGCAGTAACCATCGA...GCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CCA 90 bp TCTTTACTTCAAGAACTTTATTCTTCTTATCCAACAGTGCCTTATGAACCTCTGCGATTGGAGGAGATGTaGCTCCCAGCCCGCGACCTC +
Preference number: 4 (lower is better)
Translates to: SLLQELYSSYPTVPYEPLRLEEM*LPARDL
Trigger: GAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCG...CAGAGGTTCATAAGGCACTGTTGGATAAGAAGAATAAAGTTCTTGAAGTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATAATCATACGCTCGATTaGAGGAGATGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WRWTLGFPVWDYCEHHYYNHTLD*RRCGSQ
Trigger: CTGGGAGCCACATCTCCTCCAATCGAGCGTATGATT...ATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGGTTATAATCATACGCTCGATTaGAGGAGATGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TVNHNCLYMGHLNSMRGYNHTLD*RRCGSQ
Trigger: CTGGGAGCCACATCTCCTCCAATCGAGCGTATGATT...ATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CCA 90 bp TGGACAGGAAGTCAAACATGTCTGCTAGTGCCCTTCCTTCCAGTCCGGCCAAATTGTATGGTTCTGCCTTaGATACGGCATAAACAACAT +
Preference number: 4 (lower is better)
Translates to: WTGSQTCLLVPFLPVRPNCMVLP*IRHKQH
Trigger: ATGTTGTTTATGCCGTATCCAAGGCAGAACCATACA...ATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCCCGAGGTTGAGGTATTaGGTTTCTTTGAAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: SHLLSHQPNLTHLSFCVLPRLRY*VSLKEA
Trigger: CGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGG...GAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp GAACGACTCTGCCCCGGAGTAACTTTTGAAGGTAGATCACAGCCATTTCCATTTTTCCAAGGTTGGAGTTaGAAGCCGAGGTTGAGGTAT +
Preference number: 4 (lower is better)
Translates to: ERLCPGVTFEGRSQPFPFFQGWS*KPRLRY
Trigger: ATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAA...AAATGGAAATGGCTGTGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TATAAACCAACTCAGCAACAATCTCCTCTGACTGAAGATAGGTTCGGCGGCTTTCGTCATTTCCAAGGTTaGAGTTGGAAGCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: YKPTQQQSPLTEDRFGGFRHFQG*SWKPRL
Trigger: CAACCTCGGCTTCCAACTCCAACCTTGGAAATGACG...AAAGCCGCCGAACCTATCTTCAGTCAGAGGAGATTGTTGCTGAGTTGGTTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TTCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGGTCTCACCAGCTCTTTaGACAGGAAGTCAAACATGT +
Preference number: 4 (lower is better)
Translates to: FIHHFPPLLKLGGVTQSGVSPAL*TGSQTC
Trigger: ACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGAC...CCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCTATTTCTGCCCTaGCTTGTTCTTCTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCSLFLP*LVLLQY
Trigger: ATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGA...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp AGTGACACCTTGTGCTCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTGTATTTTTGCACCTCTaGGATCAGAAAACTATAAAC +
Preference number: 4 (lower is better)
Translates to: SDTLCSCKFLCRCKARVTVFLHL*DQKTIN
Trigger: GTTTATAGTTTTCTGATCCCAGAGGTGCAAAAATAC...AGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGAGCACAAGGTGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTCTTTCTCAAGTAACATaGCAGCATTTGAGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCLSQVT*QHLRPH
Trigger: ATGAGGCCTCAAATGCTGCCATGTTACTTGAGAAAG...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTCTTGGGTTTCCAGTTTaGGACTATTGTGAACACCAC +
Preference number: 4 (lower is better)
Translates to: IGRHFQGWSWKPRLRYWVLGFPV*DYCEHH
Trigger: GTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAG...AACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR CCA 90 bp TCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGGAGTTTTCTGTTCCGATaGAGATGGACACTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SFIIFLLFSNWEVSLRAGSFLFR*RWTLGF
Trigger: AAACCCAAGTGTCCATCTCCATCGGAACAGAAAACT...CCCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR CAA 72 bp TGGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTTCTTaGAAGGAAGCGAGGGGGTTTCTTTACTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: WSWKPRLRYWVS*KEARGFLYFKN
Trigger: GTTCTTGAAGTAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CAA 72 bp TTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATaGGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: FPRLELEAEVEV*GFFEGSEGVSL
Trigger: TAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CTAGTGCCCTTCCTTCCAGTCCGGCCAAATGGTTTTCAACCAGTGACACCTTGTATGGTCTTTCTCACTTaGCACAATAAACAATGGATC +
Preference number: 4 (lower is better)
Translates to: LVPFLPVRPNGFQPVTPCMVFLT*HNKQWI
Trigger: GATCCATTGTTTATTGTGTCAAGTGAGAAAGACCAT...ACAAGGTGTCACTGGTTGAAAACCATTTGGCCGGACTGGAAGGAAGGGCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS-3UTR TCA 90 bp AGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTCAAGAGCTCAGGGATTaGGTCCTGACATACTACATA +
Preference number: 4 (lower is better)
Translates to: SNTVNHNCLYMGHLNSMRQELRD*VLTYYI
Trigger: TATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTG...ACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR TCA 90 bp TGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTTCAAGTTTTCTGATTGTTaGTACATGCGTGCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: WTSFPRLELEAEVEVLGFKFSDC*YMRALN
Trigger: ATTCAGCGCACGCATGTATCAACAATCAGAAAACTT...GAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp ACTATGGTGAACTTTAACCACCTCCTTAAATATCTCGTCCTCCTCCCGCAGGCGTTCCTACAAGTTTTCTaGTTGTTGATACATGCGTGC +
Preference number: 4 (lower is better)
Translates to: TMVNFNHLLKYLVLLPQAFLQVF*LLIHAC
Trigger: GCACGCATGTATCAACAATCAGAAAACTTGTAGGAA...CGCCTGCGGGAGGAGGACGAGATATTTAAGGAGGTGGTTAAAGTTCACCATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTATACTACAAAGTCCTCTaGGTTGTTGTCTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: EAEVEVLGFFEGSEGVSLYYKVL*VVVWET
Trigger: TGTTTCCCAGACAACAACTCAGAGGACTTTGTAGTA...TAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp ACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTCAAAATCTCCTTTCTCATaGATCACACACTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: TVPYEPLPTHSPTLLPSSKSPFS*ITHWQV
Trigger: AACTTGCCAGTGTGTGATTCATGAGAAAGGAGATTT...TGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GAGAAAGTCTGCTGTTCCCAGCTGTATAGCATTCCCCTCCCACCTTCTATCCCATCCTACTTCAGTTTCTaGAAAGACCCTTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: EKVCCSQLYSIPLPPSIPSYFSF*KDPFFL
Trigger: CAAAAAGAAAGGGTCTTTTCAGAAACTGAAGTAGGA...TGGGATAGAAGGTGGGAGGGGAATGCTATACAGCTGGGAACAGCAGACTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp ACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGGTTATTGTACATGGGCCATTTaGACAGCATGCGTGGTTATC +
Preference number: 4 (lower is better)
Translates to: TVNHNCLYMGHLNSMRGYCTWAI*TACVVI
Trigger: GATAACCACGCATGCTGTTCAAATGGCCCATGTACA...ATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR GCA 90 bp CAACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTGGACAGGATCTGACTTaGTCCAATATAGAGAATATC +
Preference number: 4 (lower is better)
Translates to: QQCLMNLCQLIVQPCCPLGQDLT*SNIENI
Trigger: GATATTCTCTATATTGGAGCAAGTCAGATCCTGTCC...AAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGGTGAAGGGATGGATAGGTaGTTAGTAGAAGTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NTVNHNCLYMGHLNSMRGEGMDR*LVEVGG
Trigger: TCCTCCTACTTCTACTAAGCACCTATCCATCCCTTC...ACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR GCA 90 bp AGGAAGAATCCTCCTGGAATCCTGATGCTTGTCAATACACAGGATGGGCAGATTGAAGGGATGGATAGGTaGTTAGTAGAAGTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RKNPPGILMLVNTQDGQIEGMDR*LVEVGG
Trigger: TCCTCCTACTTCTACTAAGCACCTATCCATCCCTTC...AATCTGCCCATCCTGTGTATTGACAAGCATCAGGATTCCAGGAGGATTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp GGGGTTGTGTCACAAAATCTGGGAGACATGACTCAAGTTCCACTAATCCTTCATTCCAGGCGAATCTCCTaGAGTTTTTCAATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GVVSQNLGDMTQVPLILHSRRIS*SFSISC
Trigger: GCAGGAGATTGAAAAACTGCAGGAGATTCGCCTGGA...ATGAAGGATTAGTGGAACTTGAGTCATGTCTCCCAGATTTTGTGACACAACCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTACAGCTTCGCCTCTTTTCCCTCCTaGAGTTTAGACCACCGGGCA +
Preference number: 4 (lower is better)
Translates to: TLGEVQTIGIIYDDSYSFASFPS*SLDHRA
Trigger: TGCCCGGTGGTCTAAACTGCAGGAGGGAAAAGAGGC...GAAGCTGTACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ATGTGCATTCATTTCTGTGTCATCGAGTGCTGCTCTTACCCTACAACGGCAGAGCTTCTTATCCAACAGTaGCTTATGAACCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: MCIHFCVIECCSYPTTAELLIQQ*LMNLCQ
Trigger: TTGGCAGAGGTTCATAAGGCACTGTTGGATAAGAAG...CTCTGCCGTTGTAGGGTAAGAGCAGCACTCGATGACACAGAAATGAATGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp ATCCTGAGTCATGGAATATGCACATTTTCAGCCTTAGTAGATAATGCCAATGTCGTAGTGCGTGGCAGGTaGGCAACTCCTGGATCAACT +
Preference number: 4 (lower is better)
Translates to: ILSHGICTFSALVDNANVVVRGR*ATPGST
Trigger: AGTTGATCCAGGAGTTGCGCACCTGCCACGCACTAC...GACATTGGCATTATCTACTAAGGCTGAAAATGTGCATATTCCATGACTCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp CCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGATGGCCTGGCTTGTTCTTCTaGAGTATTCGCTTCGGTATT +
Preference number: 4 (lower is better)
Translates to: PSIPSAQPNSLVILCSRWPGLFF*SIRFGI
Trigger: AATACCGAAGCGAATACTGCAGAAGAACAAGCCAGG...CCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp AGGAAGAATCCTCCTGGAATCCTGATGCTTGTCAATACACAGGATGGGCAGATTCCTGGCTTGTTCTTCTaGAGTATTCGCTTCGGTATT +
Preference number: 4 (lower is better)
Translates to: RKNPPGILMLVNTQDGQIPGLFF*SIRFGI
Trigger: AATACCGAAGCGAATACTGCAGAAGAACAAGCCAGG...AATCTGCCCATCCTGTGTATTGACAAGCATCAGGATTCCAGGAGGATTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp ACCCAAGACGAGACAGAGGTCCATAGACCTGTGATGCATAATCAGAATAATCCTCAAGTTTATGAGCAGTaGACACCTTGGGAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: TQDETEVHRPVMHNQNNPQVYEQ*TPWEKC
Trigger: GCACTTCTCCCAAGGTGTGCACTGCTCATAAACTTG...AGGATTATTCTGATTATGCATCACAGGTCTATGGACCTCTGTCTCGTCTTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TGCATGAACACACTTCTTAGATCTAAAGCTCAAAGGTGGGTTGATGTGCCACTGAAAGGTGGGTTGATGTaGCACTGTAGAAGCAGACCA +
Preference number: 4 (lower is better)
Translates to: CMNTLLRSKAQRWVDVPLKGGLM*HCRSRP
Trigger: TGGTCTGCTTCTACAGTGGCACATCAACCCACCTTT...CAGTGGCACATCAACCCACCTTTGAGCTTTAGATCTAAGAAGTGTGTTCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCTCGATGGTTACTGCGTaGCTCATGGTGCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: IGHLQLTSVILISLPIPSSMVTA*LMVPPL
Trigger: AAGAGGCGGCACCATGAGCCACGCAGTAACCATCGA...GGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp AACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATATGTTTAATCATACGCTCGATTaGAGGAGATGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: NHAFRVTVDDLMGCKNMFNHTLD*RRCGSQ
Trigger: CTGGGAGCCACATCTCCTCCAATCGAGCGTATGATT...AAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp CCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGATGGCGAATCAGGGTAGCTTaGATATTTGCCTGTGTATGG +
Preference number: 4 (lower is better)
Translates to: PSIPSAQPNSLVILCSRWRIRVA*IFACVW
Trigger: CCATACACAGGCAAATATCCAAGCTACCCTGATTCG...CCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273390.9
CDS-3UTR CCA 90 bp AAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGGTTATCAGCACGAATCAGGGTAGCTTaGATATTTGCCTGTGTATGG +
Preference number: 4 (lower is better)
Translates to: KPQLPVHGPFEQHAWLSARIRVA*IFACVW
Trigger: CCATACACAGGCAAATATCCAAGCTACCCTGATTCG...TGCTGATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CCA 90 bp TCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGGTGTATGGTTCTGCCTTaGATACGGCATAAACAACAT +
Preference number: 4 (lower is better)
Translates to: SFIIFLLFSNWEVSLRAGCMVLP*IRHKQH
Trigger: ATGTTGTTTATGCCGTATCCAAGGCAGAACCATACA...CCCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR CCA 90 bp CTGACATACTACATATTCTGCAGAGTATGGATCTGTTTGAACGTCAGCATCCCGAGGAGGAAAAGTGTATaGTTCTGCCTTGGATACGGC +
Preference number: 4 (lower is better)
Translates to: LTYYIFCRVWICLNVSIPRRKSV*FCLGYG
Trigger: GCCGTATCCAAGGCAGAACCATACACTTTTCCTCCT...CGGGATGCTGACGTTCAAACAGATCCATACTCTGCAGAATATGTAGTATGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TATCCAACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTTTGGAGCTCTGATTTaGGGTTGTGTCACAAAATCT +
Preference number: 4 (lower is better)
Translates to: YPTVPYEPLPTHSPTLLPFGALI*GCVTKS
Trigger: AGATTTTGTGACACAACCCCAAATCAGAGCTCCAAA...GGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGTTGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp ATGTGCATTCATTTCTGTGTCATCGAGTGCTGCTCTTACCCTACAACGGCAGAGAATGTAGTTACCATCTaGCCCTTCAGAGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: MCIHFCVIECCSYPTTAENVVTI*PFRESL
Trigger: CAGACTTTCTCTGAAGGGCCAGATGGTAACTACATT...CTCTGCCGTTGTAGGGTAAGAGCAGCACTCGATGACACAGAAATGAATGCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp AACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGGTTCAGGGATTGAGTCCTaGCATACTACATATTCTGCA +
Preference number: 4 (lower is better)
Translates to: NTVNHNCLYMGHLNSMRGSGIES*HTTYSA
Trigger: TGCAGAATATGTAGTATGTCAGGACTCAATCCCTGA...ACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR TCA 90 bp GGGGTTGTGTCACAAAATCTGGGAGACATGACTCAAGTTCCACTAATCCTTCATCAAGAGCTCAGGGATTaGGTCCTGACATACTACATA +
Preference number: 4 (lower is better)
Translates to: GVVSQNLGDMTQVPLILHQELRD*VLTYYI
Trigger: TATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTG...ATGAAGGATTAGTGGAACTTGAGTCATGTCTCCCAGATTTTGTGACACAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp GAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAAGGAAGCGAGGGGGTTTCTTTAATATTCACTTCATTCTaGTTCTCTTCACGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EAEVEVLGFFEGSEGVSLIFTSF*FSSRFL
Trigger: GAGGAAGCGTGAAGAGAATCAGAATGAAGTGAATAT...TAAAGAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CAAACATCATGTTCTGAACGACTCTGCCCCGGAGTAACTTTTGAAGGTAGATCAGATACATGCGTGCGCTaGATTTTTGCCATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: QTSCSERLCPGVTFEGRSDTCVR*IFAIFA
Trigger: GGCAAAAATGGCAAAAATTCAGCGCACGCATGTATC...TGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTCAGAAAACCAGCTTTGGTCTTATAGTACTATGGTaGACTTTAACCACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: LCQLIVQPCCPLQKTSFGLIVLW*TLTTSL
Trigger: TAAGGAGGTGGTTAAAGTTCACCATAGTACTATAAG...ACCAAAGCTGGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGGCATAAGCAATGTCATTaGTTTTCTCAGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SFIIFLLFSNWEVSLRAGHKQCH*FSQPSS
Trigger: AGAAGATGGCTGAGAAAATCAATGACATTGCTTATG...CCCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTACCGTGTAACTGTGGATaGTCTGATGGGCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLPCNCG*SDGLQE
Trigger: TTCTTGCAGCCCATCAGATCATCCACAGTTACACGG...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp ATGTGCATTCATTTCTGTGTCATCGAGTGCTGCTCTTACCCTACAACGGCAGAGAATGCCAATGTCCTGTaGATAGTGAACCAAAACTAC +
Preference number: 4 (lower is better)
Translates to: MCIHFCVIECCSYPTTAENANVL*IVNQNY
Trigger: GTAGTTTTGGTTCACTATTCACAGGACATTGGCATT...CTCTGCCGTTGTAGGGTAAGAGCAGCACTCGATGACACAGAAATGAATGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp GAGCAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTAGCTCAAAGGTGGGTTaGTGTGCCACTGTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: EQCTPWEKCRLLELFMMISSKVG*CATVEA
Trigger: TGCTTCTACAGTGGCACATCAACCCACCTTTGAGCT...AATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp CTTTTGAACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATTGTTCTGAACGACTCTaGCCCGGAGTAACTTTTGAA +
Preference number: 4 (lower is better)
Translates to: LLNHAFRVTVDDLMGCKNCSERL*PGVTFE
Trigger: TTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACA...ATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp CAACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTACACCTTGGGAGAAGTaGAGACTATTGGAATTATTT +
Preference number: 4 (lower is better)
Translates to: QQCLMNLCQLIVQPCCPLTPWEK*RLLELF
Trigger: AAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGT...AAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp AACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATATGTTTCCGAGGTTGAGGTATTaGGTTTCTTTGAAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: NHAFRVTVDDLMGCKNMFPRLRY*VSLKEA
Trigger: CGCTTCCTTCAAAGAAACCCAATACCTCAACCTCGG...AAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TATAGTTTTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTTCCAAGGTTGGAGTTaGAAGCCGAGGTTGAGGTAT +
Preference number: 4 (lower is better)
Translates to: YSFLFRWRWTLGFPVWDYFQGWS*KPRLRY
Trigger: ATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAA...ATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTTTCTTCTTCTTCATTaGACGTCATTTCCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCFLLLH*TSFPRL
Trigger: CAACCTTGGAAATGACGTCCAATGAAGAAGAAGAAA...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp CAAACATCATGTTCTGAACGACTCTGCCCCGGAGTAACTTTTGAAGGTAGATCAGTCTCACCAGCTCTTTaGACAGGAAGTCAAACATGT +
Preference number: 4 (lower is better)
Translates to: QTSCSERLCPGVTFEGRSVSPAL*TGSQTC
Trigger: ACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGAC...TGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TGCGCAACTCCTGGATCAACTCCAGTCGCTTTTCTTTCCCTTCAAACATCATGTCTTTCTCAAGTAACATaGCAGCATTTGAGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: CATPGSTPVAFLSLQTSCLSQVT*QHLRPH
Trigger: ATGAGGCCTCAAATGCTGCCATGTTACTTGAGAAAG...ACATGATGTTTGAAGGGAAAGAAAAGCGACTGGAGTTGATCCAGGAGTTGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp CCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGATGGAGTTTTCTGTTCCGATaGAGATGGACACTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PSIPSAQPNSLVILCSRWSFLFR*RWTLGF
Trigger: AAACCCAAGTGTCCATCTCCATCGGAACAGAAAACT...CCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp TCTCAGCCATCTTCTCTATTTCTGCCCTGGCTTGTTCTTCTGCAGTATTCGCTTATAGCACCATCTCTATaGCTGTTGCATGAACACACT +
Preference number: 4 (lower is better)
Translates to: SQPSSLFLPWLVLLQYSLIAPSL*LLHEHT
Trigger: AGTGTGTTCATGCAACAGCCATAGAGATGGTGCTAT...AAGCGAATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482573.5
3UTR CAA 72 bp CTGACATACTACATATTCTGCAGAGTATGGATCTGTTaGAACGTCAGCATCCCGATAATCAGTCTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LTYYIFCRVWIC*NVSIPIISLSA
Trigger: GGCACTCAGACTGATTATCGGGATGCTGACGTTCAAACAGATCCATACTCTGCAGAATATGTAGTATGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
3UTR CAA 72 bp CTTCTTCTTCATTGGACGTCATTTCCAAGGTTGGAGTaGGAAGCCGAGGTTGAGGTATTGGGTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LLLHWTSFPRLE*EAEVEVLGFFE
Trigger: TTCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CTGACATACTACATATTCTGCAGAGTATGGATCTGTTTGAACGTCAGCATCCCGTCAGGGATTGAGTCCTaGCATACTACATATTCTGCA +
Preference number: 4 (lower is better)
Translates to: LTYYIFCRVWICLNVSIPSGIES*HTTYSA
Trigger: TGCAGAATATGTAGTATGTCAGGACTCAATCCCTGA...CGGGATGCTGACGTTCAAACAGATCCATACTCTGCAGAATATGTAGTATGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp AGGAAGAATCCTCCTGGAATCCTGATGCTTGTCAATACACAGGATGGGCAGATTATATTCACTTCATTCTaGTTCTCTTCACGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RKNPPGILMLVNTQDGQIIFTSF*FSSRFL
Trigger: GAGGAAGCGTGAAGAGAATCAGAATGAAGTGAATAT...AATCTGCCCATCCTGTGTATTGACAAGCATCAGGATTCCAGGAGGATTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp TCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCTTCCTACAAGTTTTCTaGTTGTTGATACATGCGTGC +
Preference number: 4 (lower is better)
Translates to: SHLLSHQPNLTHLSFCVLFLQVF*LLIHAC
Trigger: GCACGCATGTATCAACAATCAGAAAACTTGTAGGAA...GAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp ACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTACAGCTTCGGTATTGGGTTTCTTTaGAGGAAGCGAGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: TLGEVQTIGIIYDDSYSFGIGFL*RKRGGF
Trigger: GAAACCCCCTCGCTTCCTTCAAAGAAACCCAATACC...GAAGCTGTACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp ATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCTCAAACATCATGTTCTaGACGACTCTGCCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: IGHLQLTSVILISLPIPSSNIMF*TTLPRS
Trigger: ACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTGA...GGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp ATCCTGAGTCATGGAATATGCACATTTTCAGCCTTAGTAGATAATGCCAATGTCAGCTCAAAGGTGGGTTaGTGTGCCACTGTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: ILSHGICTFSALVDNANVSSKVG*CATVEA
Trigger: TGCTTCTACAGTGGCACATCAACCCACCTTTGAGCT...GACATTGGCATTATCTACTAAGGCTGAAAATGTGCATATTCCATGACTCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp AAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGGTTATCAGCAGGACAGGATCTGACTTaGTCCAATATAGAGAATATC +
Preference number: 4 (lower is better)
Translates to: KPQLPVHGPFEQHAWLSAGQDLT*SNIENI
Trigger: GATATTCTCTATATTGGAGCAAGTCAGATCCTGTCC...TGCTGATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR GCA 90 bp GGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATAAATATTTTTGTCATTCAGTTGTGGTGAGCTaGCGGAGGGCTTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GFPVWDYCEHHYYKYFCHSVVVS*RRASLC
Trigger: ACACAGAGAAGCCCTCCGGCAGCTCACCACAACTGA...ATGACAAAAATATTTATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp AACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGGTAAAAGTGTATGGTTCTaGCTTGGATACGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: NTVNHNCLYMGHLNSMRGKSVWF*LGYGIN
Trigger: GTTTATGCCGTATCCAAGGCAGAACCATACACTTTT...ACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR GCA 90 bp TCTCAGCCATCTTCTCTATTTCTGCCCTGGCTTGTTCTTCTGCAGTATTCGCTTAAAAGTGTATGGTTCTaGCTTGGATACGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: SQPSSLFLPWLVLLQYSLKSVWF*LGYGIN
Trigger: GTTTATGCCGTATCCAAGGCAGAACCATACACTTTT...AAGCGAATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCCATCCCATGTTAGTTTTTCAATCTCCTaGTCTCTGAAGGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: TANFCHFNLFAHSFPSHVSFSIS*SLKAHS
Trigger: GGAGTGGGCCTTCAGAGAGCAGGAGATTGAAAAACT...AACATGGGATGGGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp TGCATGAACACACTTCTTAGATCTAAAGCTCAAAGGTGGGTTGATGTGCCACTGCACCGGGCATTCAAGTaGTTCATATTCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: CMNTLLRSKAQRWVDVPLHRAFK*FIFTSF
Trigger: GAATGAAGTGAATATGAAGCACTTGAATGCCCGGTG...CAGTGGCACATCAACCCACCTTTGAGCTTTAGATCTAAGAAGTGTGTTCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp CTTCAGAAAACCAGCTTTGGTGGTAATGACTTTAGGTTTTGGAGCTCTGATTTGCTCATAGTCCAACCTTaGTGCCCTCTTCAGAAAACC +
Preference number: 4 (lower is better)
Translates to: LQKTSFGGNDFRFWSSDLLIVQP*CPLQKT
Trigger: GGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAG...CAAATCAGAGCTCCAAAACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ATTATCAATTTTATTCTCTGCTGTGGTATTTCTGCCCTTTTCACTGCATCCAAATCATGCAAGTTCCTCTaGCGCTGTAAGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: IINFILCCGISALFTASKSCKFL*RCKARV
Trigger: GACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA...TTTGGATGCAGTGAAAAGGGCAGAAATACCACAGCAGAGAATAAAATTGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp ATGTGCATTCATTTCTGTGTCATCGAGTGCTGCTCTTACCCTACAACGGCAGAGAATATGTTTCCGCTGTaGGTTCCTCACTTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: MCIHFCVIECCSYPTTAENMFPL*VPHFFF
Trigger: AAAGAAAAAGTGAGGAACGCACAGCGGAAACATATT...CTCTGCCGTTGTAGGGTAAGAGCAGCACTCGATGACACAGAAATGAATGCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp TTCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGAATATGTTTCCGCTGTaGGTTCCTCACTTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: FIHHFPPLLKLGGVTQSGNMFPL*VPHFFF
Trigger: AAAGAAAAAGTGAGGAACGCACAGCGGAAACATATT...CCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTCAAGTTTATGAGCAGTaGACACCTTGGGAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRQVYEQ*TPWEKC
Trigger: GCACTTCTCCCAAGGTGTGCACTGCTCATAAACTTG...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp GAGCAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCAAGTTTATGAGCAGTaGACACCTTGGGAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: EQCTPWEKCRLLELFMMIQVYEQ*TPWEKC
Trigger: GCACTTCTCCCAAGGTGTGCACTGCTCATAAACTTG...AATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTAAAACAAAATTTAGTTaGTTCCTTACTGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCKTKFS*FLTGAV
Trigger: CACTGCACCAGTAAGGAAGCAACTAAATTTTGTTTT...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp TTATATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCAGGAGGAAAAGTGTATaGTTCTGCCTTGGATACGGC +
Preference number: 4 (lower is better)
Translates to: LYSNTVNHNCLYMGHLNSRRKSV*FCLGYG
Trigger: GCCGTATCCAAGGCAGAACCATACACTTTTCCTCCT...GCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CCA 90 bp ACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTACAGCTTCCGTCATTTCCAAGGTTaGAGTTGGAAGCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TLGEVQTIGIIYDDSYSFRHFQG*SWKPRL
Trigger: CAACCTCGGCTTCCAACTCCAACCTTGGAAATGACG...GAAGCTGTACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp ACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTACAGCTTCTCCAGTCCGGCCAAATaGTTTTCAACCAGTGACACC +
Preference number: 4 (lower is better)
Translates to: TLGEVQTIGIIYDDSYSFSSPAK*FSTSDT
Trigger: GGTGTCACTGGTTGAAAACCATTTGGCCGGACTGGA...GAAGCTGTACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp TATAGTTTTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATGTCTCACCAGCTCTTTaGACAGGAAGTCAAACATGT +
Preference number: 4 (lower is better)
Translates to: YSFLFRWRWTLGFPVWDYVSPAL*TGSQTC
Trigger: ACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGAC...ATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp TTTGACAAAGTATTTTTGCACCTCTGGGATCAGAAAACTATAAACCAACTCAGCAGCATGACAAAGGCATaGATCCTCCTCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FDKVFLHLWDQKTINQLSSMTKA*ILLSSC
Trigger: GCAGGAGGAGAGGAGGATCCATGCCTTTGTCATGCT...GCTGAGTTGGTTTATAGTTTTCTGATCCCAGAGGTGCAAAAATACTTTGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
3UTR CAA 72 bp CAAAGTATAGTTTTCTGTTCCGATGGAGATGGACACTaGGGTTTCCAGTTTGGGACTATTGTGAACACCACT +
Preference number: 4 (lower is better)
Translates to: QSIVFCSDGDGH*GFQFGTIVNTT
Trigger: AGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp GGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATACGGCATAAACAACATTaGATGGCATCTGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: GDGHLGFQFGTIVNTTTIRHKQH*MASAEK
Trigger: TTTTTCAGCAGATGCCATTCAATGTTGTTTATGCCG...TATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp AGTGTATGGTTCTGCCTTGGATACGGCATAAACAACATTGAATGGCATCTGCTGCGGCATAAACAACATTaGATGGCATCTGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: SVWFCLGYGINNIEWHLLRHKQH*MASAEK
Trigger: TTTTTCAGCAGATGCCATTCAATGTTGTTTATGCCG...CAGCAGATGCCATTCAATGTTGTTTATGCCGTATCCAAGGCAGAACCATACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TATAGTTTTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTCAGGGATTGAGTCCTaGCATACTACATATTCTGCA +
Preference number: 4 (lower is better)
Translates to: YSFLFRWRWTLGFPVWDYSGIES*HTTYSA
Trigger: TGCAGAATATGTAGTATGTCAGGACTCAATCCCTGA...ATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp ATTTCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGATATTCACTTCATTCTaGTTCTCTTCACGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ISFIIFLLFSNWEVSLRAIFTSF*FSSRFL
Trigger: GAGGAAGCGTGAAGAGAATCAGAATGAAGTGAATAT...CGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TGCATGAACACACTTCTTAGATCTAAAGCTCAAAGGTGGGTTGATGTGCCACTGAAGTTTTCTGATTGTTaGTACATGCGTGCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: CMNTLLRSKAQRWVDVPLKFSDC*YMRALN
Trigger: ATTCAGCGCACGCATGTATCAACAATCAGAAAACTT...CAGTGGCACATCAACCCACCTTTGAGCTTTAGATCTAAGAAGTGTGTTCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp TGCATGAACACACTTCTTAGATCTAAAGCTCAAAGGTGGGTTGATGTGCCACTGAGGTCCATAGACCTGTaGTGCATAATCAGAATAATC +
Preference number: 4 (lower is better)
Translates to: CMNTLLRSKAQRWVDVPLRSIDL*CIIRII
Trigger: GATTATTCTGATTATGCATCACAGGTCTATGGACCT...CAGTGGCACATCAACCCACCTTTGAGCTTTAGATCTAAGAAGTGTGTTCATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp GCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCTTTGACAAAGTATTTTTCAAACATCATGTTCTaGACGACTCTGCCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: ARICFRCAFLTFSLTKYFSNIMF*TTLPRS
Trigger: ACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTGA...AAAATACTTTGTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp CTTCAGAAAACCAGCTTTGGTGGTAATGACTTTAGGTTTTGGAGCTCTGATTTGATGGTTTTCAACCAGTaGCACCTTGTGCTCATGCAA +
Preference number: 4 (lower is better)
Translates to: LQKTSFGGNDFRFWSSDLMVFNQ*HLVLMQ
Trigger: TTGCATGAGCACAAGGTGTCACTGGTTGAAAACCAT...CAAATCAGAGCTCCAAAACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCCTTATAGTACTATGGTaGACTTTAACCACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: SHLLSHQPNLTHLSFCVLLIVLW*TLTTSL
Trigger: TAAGGAGGTGGTTAAAGTTCACCATAGTACTATAAG...GAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp TCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCCATAAGCAATGTCATTaGTTTTCTCAGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SHLLSHQPNLTHLSFCVLHKQCH*FSQPSS
Trigger: AGAAGATGGCTGAGAAAATCAATGACATTGCTTATG...GAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp TGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATTCTATGGCTGTTGCATaGACACACTTCTTAGATCTA +
Preference number: 4 (lower is better)
Translates to: WRWTLGFPVWDYCEHHYYSMAVA*THFLDL
Trigger: TAGATCTAAGAAGTGTGTTCATGCAACAGCCATAGA...ATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp TTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACTCCTACTTCAGTTTCTaGAAAGACCCTTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: FCSDGDGHLGFQFGTIVNSYFSF*KDPFFL
Trigger: CAAAAAGAAAGGGTCTTTTCAGAAACTGAAGTAGGA...GTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp ATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCTCCAGGCGAATCTCCTaGAGTTTTTCAATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IGHLQLTSVILISLPIPSSRRIS*SFSISC
Trigger: GCAGGAGATTGAAAAACTGCAGGAGATTCGCCTGGA...GGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp ACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCCATCCCATGTTTGCCTTATGAACCTCTaGCAACTCATAGTCCAACCT +
Preference number: 4 (lower is better)
Translates to: TANFCHFNLFAHSFPSHVCLMNL*QLIVQP
Trigger: AGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCA...AACATGGGATGGGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp GAACGACTCTGCCCCGGAGTAACTTTTGAAGGTAGATCACAGCCATTTCCATTTAATATGTTTCCGCTGTaGGTTCCTCACTTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ERLCPGVTFEGRSQPFPFNMFPL*VPHFFF
Trigger: AAAGAAAAAGTGAGGAACGCACAGCGGAAACATATT...AAATGGAAATGGCTGTGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp GAACGACTCTGCCCCGGAGTAACTTTTGAAGGTAGATCACAGCCATTTCCATTTACACCTTGGGAGAAGTaGAGACTATTGGAATTATTT +
Preference number: 4 (lower is better)
Translates to: ERLCPGVTFEGRSQPFPFTPWEK*RLLELF
Trigger: AAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGT...AAATGGAAATGGCTGTGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACCTGAGTCATGGAATATaGACATTTTCAGCCTTAGTA +
Preference number: 4 (lower is better)
Translates to: FCSDGDGHLGFQFGTIVNLSHGI*TFSALV
Trigger: TACTAAGGCTGAAAATGTGCATATTCCATGACTCAG...GTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp GGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATATGTATGGTTCTGCCTTaGATACGGCATAAACAACAT +
Preference number: 4 (lower is better)
Translates to: GDGHLGFQFGTIVNTTTICMVLP*IRHKQH
Trigger: ATGTTGTTTATGCCGTATCCAAGGCAGAACCATACA...TATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCAGGAGGAAAAGTGTATaGTTCTGCCTTGGATACGGC +
Preference number: 4 (lower is better)
Translates to: IGHLQLTSVILISLPIPSRRKSV*FCLGYG
Trigger: GCCGTATCCAAGGCAGAACCATACACTTTTCCTCCT...GGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTATGGAGATGGACACTTaGGTTTCCAGTTTGGGACTA +
Preference number: 4 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRMEMDT*VSSLGL
Trigger: TAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCAT...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CAA 72 bp TCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTaGTCATTTTGTGTTCTCGATGGTTTATTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: SHLLSHQPNLTH*SFCVLDGLFQK
Trigger: CTTTTGAAATAAACCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTTACTACAAAGTCCTCTaGGTTGTTGTCTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRYYKVL*VVVWET
Trigger: TGTTTCCCAGACAACAACTCAGAGGACTTTGTAGTA...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp ATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCATGGTTTTCAACCAGTaGCACCTTGTGCTCATGCAA +
Preference number: 4 (lower is better)
Translates to: IGHLQLTSVILISLPIPSMVFNQ*HLVLMQ
Trigger: TTGCATGAGCACAAGGTGTCACTGGTTGAAAACCAT...GGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp TGGGGTTGTGTCACAAAATCTGGGAGACATGACTCAAGTTCCACTAATCCTTCACTTATAGTACTATGGTaGACTTTAACCACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: WGCVTKSGRHDSSSTNPSLIVLW*TLTTSL
Trigger: TAAGGAGGTGGTTAAAGTTCACCATAGTACTATAAG...TGAAGGATTAGTGGAACTTGAGTCATGTCTCCCAGATTTTGTGACACAACCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TTCCAGTTTGGGACTATTGTGAACACCACTACTATAAATATTTTTGTCATGCCTACACTGGCAAGTTTATaGGCAGTGCACACCTTGGGA +
Preference number: 4 (lower is better)
Translates to: FQFGTIVNTTTINIFVMPTLASL*AVHTLG
Trigger: TCCCAAGGTGTGCACTGCTCATAAACTTGCCAGTGT...AGGCATGACAAAAATATTTATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp GAGCAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTGGTAGCTTGGATATTTaGCTGTGTATGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: EQCTPWEKCRLLELFMMIGSLDI*LCMVFL
Trigger: GAGAAAGACCATACACAGGCAAATATCCAAGCTACC...AATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482927.5
CDS-3UTR GCA 90 bp TTATATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCGGTAGCTTGGATATTTaGCTGTGTATGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LYSNTVNHNCLYMGHLNSGSLDI*LCMVFL
Trigger: GAGAAAGACCATACACAGGCAAATATCCAAGCTACC...GCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR GCA 90 bp TATAGTTTTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATAAAAGTGTATGGTTCTaGCTTGGATACGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: YSFLFRWRWTLGFPVWDYKSVWF*LGYGIN
Trigger: GTTTATGCCGTATCCAAGGCAGAACCATACACTTTT...ATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp ACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTACAGCTTCGAAGGGATGGATAGGTaGTTAGTAGAAGTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TLGEVQTIGIIYDDSYSFEGMDR*LVEVGG
Trigger: TCCTCCTACTTCTACTAAGCACCTATCCATCCCTTC...GAAGCTGTACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ATCCTGAGTCATGGAATATGCACATTTTCAGCCTTAGTAGATAATGCCAATGTCTGTTCTGAACGACTCTaGCCCGGAGTAACTTTTGAA +
Preference number: 4 (lower is better)
Translates to: ILSHGICTFSALVDNANVCSERL*PGVTFE
Trigger: TTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACA...GACATTGGCATTATCTACTAAGGCTGAAAATGTGCATATTCCATGACTCAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp TGCATGAACACACTTCTTAGATCTAAAGCTCAAAGGTGGGTTGATGTGCCACTGATTTCTTTTGAACCATaGTTTCCGTGTAACTGTGGA +
Preference number: 4 (lower is better)
Translates to: CMNTLLRSKAQRWVDVPLISFEP*FPCNCG
Trigger: TCCACAGTTACACGGAAAGCATGGTTCAAAAGAAAT...CAGTGGCACATCAACCCACCTTTGAGCTTTAGATCTAAGAAGTGTGTTCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp CAAACATCATGTTCTGAACGACTCTGCCCCGGAGTAACTTTTGAAGGTAGATCACTGAGTCATGGAATATaGACATTTTCAGCCTTAGTA +
Preference number: 4 (lower is better)
Translates to: QTSCSERLCPGVTFEGRSLSHGI*TFSALV
Trigger: TACTAAGGCTGAAAATGTGCATATTCCATGACTCAG...TGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR CCA 90 bp TATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGTGTATGGTTCTGCCTTaGATACGGCATAAACAACAT +
Preference number: 4 (lower is better)
Translates to: YSNTVNHNCLYMGHLNSMCMVLP*IRHKQH
Trigger: ATGTTGTTTATGCCGTATCCAAGGCAGAACCATACA...CATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CCA 90 bp CTTTTGAACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATTTTCTTCTTCTTCATTaGACGTCATTTCCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LLNHAFRVTVDDLMGCKNFLLLH*TSFPRL
Trigger: CAACCTTGGAAATGACGTCCAATGAAGAAGAAGAAA...ATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CCA 90 bp ATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCGTCTCACCAGCTCTTTaGACAGGAAGTCAAACATGT +
Preference number: 4 (lower is better)
Translates to: IGHLQLTSVILISLPIPSVSPAL*TGSQTC
Trigger: ACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGAC...GGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp TCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGTATTTTTGCACCTCTaGGATCAGAAAACTATAAAC +
Preference number: 4 (lower is better)
Translates to: SHLLSHQPNLTHLSFCVLVFLHL*DQKTIN
Trigger: GTTTATAGTTTTCTGATCCCAGAGGTGCAAAAATAC...GAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ATCCTGAGTCATGGAATATGCACATTTTCAGCCTTAGTAGATAATGCCAATGTCCTTGGGTTTCCAGTTTaGGACTATTGTGAACACCAC +
Preference number: 4 (lower is better)
Translates to: ILSHGICTFSALVDNANVLGFPV*DYCEHH
Trigger: GTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAG...GACATTGGCATTATCTACTAAGGCTGAAAATGTGCATATTCCATGACTCAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp TATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGATGGTCTTTCTCACTTaGCACAATAAACAATGGATC +
Preference number: 4 (lower is better)
Translates to: YSNTVNHNCLYMGHLNSMMVFLT*HNKQWI
Trigger: GATCCATTGTTTATTGTGTCAAGTGAGAAAGACCAT...CATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR TCA 90 bp GAGCAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTAAGTTTTCTGATTGTTaGTACATGCGTGCGCTGAAT +
Preference number: 4 (lower is better)
Translates to: EQCTPWEKCRLLELFMMIKFSDC*YMRALN
Trigger: ATTCAGCGCACGCATGTATCAACAATCAGAAAACTT...AATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp AACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATATGTTTTTGTTGATACATGCGTaGGCTGAATTTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: NHAFRVTVDDLMGCKNMFLLIHA*AEFLPF
Trigger: AAATGGCAAAAATTCAGCGCACGCATGTATCAACAA...AAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp GGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATAATCAATTTTATTCTCTaGTGTGGTATTTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GDGHLGFQFGTIVNTTTIINFIL*CGISAL
Trigger: AAGGGCAGAAATACCACAGCAGAGAATAAAATTGAT...TATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTTGGAACACAGTCATGTaGATTCATTTCTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRWNTVM*IHFCVI
Trigger: GATGACACAGAAATGAATGCACATGACTGTGTTCCA...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp ACTTTATATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACACTGTAAACCACAATTaGCTGTACATGGGCCATTTG +
Preference number: 4 (lower is better)
Translates to: TLYSNTVNHNCLYMGHLNTVNHN*LYMGHL
Trigger: CAAATGGCCCATGTACAGGCAATTGTGGTTTACAGT...GTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATATAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CCA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTATGTATGGTTCTGCCTTaGATACGGCATAAACAACAT +
Preference number: 4 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLCMVLP*IRHKQH
Trigger: ATGTTGTTTATGCCGTATCCAAGGCAGAACCATACA...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ACTTTATATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACTTTGAACAGCATGCGTaGTTATCAGCATCGTCATCT +
Preference number: 4 (lower is better)
Translates to: TLYSNTVNHNCLYMGHLNFEQHA*LSASSS
Trigger: AGATGACGATGCTGATAACCACGCATGCTGTTCAAA...GTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATATAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR TCA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTAATGGTCTTTCTCACTTaGCACAATAAACAATGGATC +
Preference number: 4 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLMVFLT*HNKQWI
Trigger: GATCCATTGTTTATTGTGTCAAGTGAGAAAGACCAT...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273390.9
CDS-3UTR TCA 90 bp ACTTTATATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACCGGCATAAACAACATTaGATGGCATCTGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: TLYSNTVNHNCLYMGHLNRHKQH*MASAEK
Trigger: TTTTTCAGCAGATGCCATTCAATGTTGTTTATGCCG...GTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATATAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR TCA 90 bp GCAAGAATATGTTTCCGCTGTGCGTTCCTCACTTTTTCTTTGACAAAGTATTTTTCAGGGATTGAGTCCTaGCATACTACATATTCTGCA +
Preference number: 4 (lower is better)
Translates to: ARICFRCAFLTFSLTKYFSGIES*HTTYSA
Trigger: TGCAGAATATGTAGTATGTCAGGACTCAATCCCTGA...AAAATACTTTGTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTCTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp TTCCAGTTTGGGACTATTGTGAACACCACTACTATAAATATTTTTGTCATGCCTCAAGAGCTCAGGGATTaGGTCCTGACATACTACATA +
Preference number: 4 (lower is better)
Translates to: FQFGTIVNTTTINIFVMPQELRD*VLTYYI
Trigger: TATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTG...AGGCATGACAAAAATATTTATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp GGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATAAATATTTTTGTCATGATACATGCGTGCGCTaGATTTTTGCCATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GFPVWDYCEHHYYKYFCHDTCVR*IFAIFA
Trigger: GGCAAAAATGGCAAAAATTCAGCGCACGCATGTATC...ATGACAAAAATATTTATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTCTTATAGTACTATGGTaGACTTTAACCACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRLIVLW*TLTTSL
Trigger: TAAGGAGGTGGTTAAAGTTCACCATAGTACTATAAG...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp ATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCAAATCTCCTTTCTCATaGATCACACACTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: IGHLQLTSVILISLPIPSKSPFS*ITHWQV
Trigger: AACTTGCCAGTGTGTGATTCATGAGAAAGGAGATTT...GGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp TCTTTACTTCAAGAACTTTATTCTTCTTATCCAACAGTGCCTTATGAACCTCTGGAAGGGATGGATAGGTaGTTAGTAGAAGTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLLQELYSSYPTVPYEPLEGMDR*LVEVGG
Trigger: TCCTCCTACTTCTACTAAGCACCTATCCATCCCTTC...CAGAGGTTCATAAGGCACTGTTGGATAAGAAGAATAAAGTTCTTGAAGTAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp TTTGACAAAGTATTTTTGCACCTCTGGGATCAGAAAACTATAAACCAACTCAGCCACCGGGCATTCAAGTaGTTCATATTCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: FDKVFLHLWDQKTINQLSHRAFK*FIFTSF
Trigger: GAATGAAGTGAATATGAAGCACTTGAATGCCCGGTG...GCTGAGTTGGTTTATAGTTTTCTGATCCCAGAGGTGCAAAAATACTTTGTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ATTATCAATTTTATTCTCTGCTGTGGTATTTCTGCCCTTTTCACTGCATCCAAAGATGATCTGATGGGCTaGAAGAATATGTTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: IINFILCCGISALFTASKDDLMG*KNMFPL
Trigger: CAGCGGAAACATATTCTTGCAGCCCATCAGATCATC...TTTGGATGCAGTGAAAAGGGCAGAAATACCACAGCAGAGAATAAAATTGATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp CCCATTCCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTTGCCAACATTAATTTCTTTTGAACCATaGTTTCCGTGTAACTGTGGA +
Preference number: 4 (lower is better)
Translates to: PIPSHPMLDHLINVLPTLISFEP*FPCNCG
Trigger: TCCACAGTTACACGGAAAGCATGGTTCAAAAGAAAT...TAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGGAATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTATTTCTTTTGAACCATaGTTTCCGTGTAACTGTGGA +
Preference number: 4 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRISFEP*FPCNCG
Trigger: TCCACAGTTACACGGAAAGCATGGTTCAAAAGAAAT...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTACACCTTGGGAGAAGTaGAGACTATTGGAATTATTT +
Preference number: 4 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRTPWEK*RLLELF
Trigger: AAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGT...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR GCA 90 bp ACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTACAGCTTCTGGAACACAGTCATGTaGATTCATTTCTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: TLGEVQTIGIIYDDSYSFWNTVM*IHFCVI
Trigger: GATGACACAGAAATGAATGCACATGACTGTGTTCCA...GAAGCTGTACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ATCCTGAGTCATGGAATATGCACATTTTCAGCCTTAGTAGATAATGCCAATGTCTTTGGAGCTCTGATTTaGGGTTGTGTCACAAAATCT +
Preference number: 4 (lower is better)
Translates to: ILSHGICTFSALVDNANVFGALI*GCVTKS
Trigger: AGATTTTGTGACACAACCCCAAATCAGAGCTCCAAA...GACATTGGCATTATCTACTAAGGCTGAAAATGTGCATATTCCATGACTCAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCCATCCCATGTTTTTCTTCTTCTTCATTaGACGTCATTTCCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: TANFCHFNLFAHSFPSHVFLLLH*TSFPRL
Trigger: CAACCTTGGAAATGACGTCCAATGAAGAAGAAGAAA...AACATGGGATGGGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CAA 72 bp TATGAGCAGTGCACACCTTGGGAGAAGTGCAGACTATaGGAATTATTTATGATGATTCGTACAGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YEQCTPWEKCRL*ELFMMIRTASF
Trigger: AAAAGAAGCTGTACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR TCA 90 bp ATTATCAATTTTATTCTCTGCTGTGGTATTTCTGCCCTTTTCACTGCATCCAAATACTACAAAGTCCTCTaGGTTGTTGTCTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: IINFILCCGISALFTASKYYKVL*VVVWET
Trigger: TGTTTCCCAGACAACAACTCAGAGGACTTTGTAGTA...TTTGGATGCAGTGAAAAGGGCAGAAATACCACAGCAGAGAATAAAATTGATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp ATTATCAATTTTATTCTCTGCTGTGGTATTTCTGCCCTTTTCACTGCATCCAAATCTCTATTTCTGCCCTaGCTTGTTCTTCTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: IINFILCCGISALFTASKSLFLP*LVLLQY
Trigger: ATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGA...TTTGGATGCAGTGAAAAGGGCAGAAATACCACAGCAGAGAATAAAATTGATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp GGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATAAATATTTTTGTCATCTTTCTCAAGTAACATaGCAGCATTTGAGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GFPVWDYCEHHYYKYFCHLSQVT*QHLRPH
Trigger: ATGAGGCCTCAAATGCTGCCATGTTACTTGAGAAAG...ATGACAAAAATATTTATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CCA 90 bp TTCCAGTTTGGGACTATTGTGAACACCACTACTATAAATATTTTTGTCATGCCTATAGCACCATCTCTATaGCTGTTGCATGAACACACT +
Preference number: 4 (lower is better)
Translates to: FQFGTIVNTTTINIFVMPIAPSL*LLHEHT
Trigger: AGTGTGTTCATGCAACAGCCATAGAGATGGTGCTAT...AGGCATGACAAAAATATTTATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CAA 72 bp GTCATGCCTGTTGGTGCACATACTCATGCATTTCTGTaGAATATATATCTAGGAGATAAAATCCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: VMPVGAHTHAFL*NIYLGDKILSH
Trigger: ATGACTCAGGATTTTATCTCCTAGATATATATTCAACAGAAATGCATGAGTATGTGCACCAACAGGCATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CAA 72 bp CCTTCCCATCCCATGTTGGATCACTTAATAAATGTGTaGCCAACATTATCAATTTTATTCTCTGCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: PSHPMLDHLINV*PTLSILFSAVV
Trigger: TACCACAGCAGAGAATAAAATTGATAATGTTGGCAACACATTTATTAAGTGATCCAACATGGGATGGGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
3UTR CAA 72 bp TCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTaGTGTTCTCGATGGTTTATTTCAAAAGTGAATGAT +
Preference number: 4 (lower is better)
Translates to: SIPSAQPNSLVI*CSRWFISKVND
Trigger: ATCATTCACTTTTGAAATAAACCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR TCA 90 bp ATTATCAATTTTATTCTCTGCTGTGGTATTTCTGCCCTTTTCACTGCATCCAAAAGGTCCATAGACCTGTaGTGCATAATCAGAATAATC +
Preference number: 4 (lower is better)
Translates to: IINFILCCGISALFTASKRSIDL*CIIRII
Trigger: GATTATTCTGATTATGCATCACAGGTCTATGGACCT...TTTGGATGCAGTGAAAAGGGCAGAAATACCACAGCAGAGAATAAAATTGATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR GCA 90 bp ATTATCAATTTTATTCTCTGCTGTGGTATTTCTGCCCTTTTCACTGCATCCAAATTGTTGATACATGCGTaGGCTGAATTTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: IINFILCCGISALFTASKLLIHA*AEFLPF
Trigger: AAATGGCAAAAATTCAGCGCACGCATGTATCAACAA...TTTGGATGCAGTGAAAAGGGCAGAAATACCACAGCAGAGAATAAAATTGATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS GCA 90 bp GCGGCTGGGCCTGGGGCTCCTCGATGGTTACTGCGTGGCTCATGGTaGCGCCTCTTTCCTCCCGCCAGCAAGGGACCAGCGGGTCAGGCC +
Preference number: 5 (lower is better)
Translates to: AAGPGAPRWLLRGSW*RLFPPASKGPAGQA
Trigger: GGCCTGACCCGCTGGTCCCTTGCTGGCGGGAGGAAAGAGGCGGCACCATGAGCCACGCAGTAACCATCGAGGAGCCCCAGGCCCAGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273390.9
ENST00000463700.1
ENST00000468630.5
ENST00000469659.5
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000488533.5
CDS TCA 90 bp GAGGAGATGTGGCTCCCAGCCCGCGACCTCTCCCGGTACCGAGTTTaGGACACCTGCGGCTGGGCCTGGGGCTCCTCGATGGTTACTGCG +
Preference number: 5 (lower is better)
Translates to: EEMWLPARDLSRYRV*DTCGWAWGSSMVTA
Trigger: CGCAGTAACCATCGAGGAGCCCCAGGCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGAGAGGTCGCGGGCTGGGAGCCACATCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273390.9
ENST00000463700.1
ENST00000468630.5
ENST00000469659.5
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000488533.5
CDS CCA 90 bp GGTACCGAGTTTGAGACACCTGCGGCTGGGCCTGGGGCTCCTCGATaGTTACTGCGTGGCTCATGGTGCCGCCTCTTTCCTCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GTEFETPAAGPGAPR*LLRGSWCRLFPPAS
Trigger: GCTGGCGGGAGGAAAGAGGCGGCACCATGAGCCACGCAGTAACCATCGAGGAGCCCCAGGCCCAGCCGCAGGTGTCTCAAACTCGGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273390.9
ENST00000463700.1
ENST00000468630.5
ENST00000469659.5
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000488533.5
CDS GCA 90 bp AGTTTGAGACACCTGCGGCTGGGCCTGGGGCTCCTCGATGGTTACTaGGTGGCTCATGGTGCCGCCTCTTTCCTCCCGCCAGCAAGGGAC +
Preference number: 5 (lower is better)
Translates to: SLRHLRLGLGLLDGY*VAHGAASFLPPARD
Trigger: GTCCCTTGCTGGCGGGAGGAAAGAGGCGGCACCATGAGCCACGCAGTAACCATCGAGGAGCCCCAGGCCCAGCCGCAGGTGTCTCAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273390.9
ENST00000463700.1
ENST00000468630.5
ENST00000469659.5
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000488533.5
CDS-3UTR CAA 90 bp TCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTTGCTTCTCGGCTTTTCTCCCGGTACCGAGTTaGAGACACCTGCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SCKFLCRCKARVTCFSAFLPVPS*RHLRLG
Trigger: GCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGAG...AAAAGCCGAGAAGCAAGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp CTGTTTTTCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGGCCGAGGTTGAGGTATaGGGTTTCTTTGAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: LFFHLAPTTLFSLSYPPLAEVEV*GFFEGS
Trigger: GCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGC...CAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS GCA 90 bp AAACAATGGATCTGGCCTAGGAGGCGACGGACGCGGAGGAAGGTCTaGGGCGGTCCTTACCGTACAGAAAATCATACGCTCGATTGGAGG +
Preference number: 5 (lower is better)
Translates to: KQWIWPRRRRTRRKV*GGPYRTENHTLDWR
Trigger: CCTCCAATCGAGCGTATGATTTTCTGTACGGTAAGGACCGCCGCAGACCTTCCTCCGCGTCCGTCGCCTCCTAGGCCAGATCCATTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS-3UTR CAA 90 bp TTGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LSCWETPTPSKRSQGQELKSYAR*EEMWLP
Trigger: TGGGAGCCACATCTCCTCCAATCGAGCGTATGATTT...GAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp GCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATTAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: AGRPRPQVSVARVKSSGIKSYAR*EEMWLP
Trigger: TGGGAGCCACATCTCCTCCAATCGAGCGTATGATTT...AATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp GTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCGCGAATCAGGGTAGCTaGGATATTTGCCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: VTQSGERGFPSTLLAGSFANQGS*DICLCM
Trigger: CATACACAGGCAAATATCCAAGCTACCCTGATTCGC...GAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS-3UTR CAA 90 bp GTGTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTAAGTCCTCTGAGTTGTaGTCTGGGAAACACCCAAGA +
Preference number: 5 (lower is better)
Translates to: VSLRAGREASQARFSRALKSSEL*SGKHPR
Trigger: TCTTGGGTGTTTCCCAGACAACAACTCAGAGGACTT...AAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTTTTCCAAGGTTGGAGTaGGAAGCCGAGGTTGAGGTA +
Preference number: 5 (lower is better)
Translates to: SLRAGREASQARFSRALSFPRLE*EAEVEV
Trigger: TACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAA...AGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp CTGTTTTTCCACCTGGCGCCGACCACTCTCTTCAGCCTCTCGTACCCGCCGCTGAGTCTCACCAGCTCTTaGGACAGGAAGTCAAACATG +
Preference number: 5 (lower is better)
Translates to: LFFHLAPTTLFSLSYPPLSLTSS*DRKSNM
Trigger: CATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACT...CAGCGGCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp ATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATTGGGTTCTCCCGGTACCGAGTTaGAGACACCTGCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: IGRHFQGWSWKPRLRYWVLPVPS*RHLRLG
Trigger: GCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGAG...AACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTAAGTCCTCTGAGTTGTaGTCTGGGAAACACCCAAGA +
Preference number: 5 (lower is better)
Translates to: SLRAGREASQARFSRALSKSSEL*SGKHPR
Trigger: TCTTGGGTGTTTCCCAGACAACAACTCAGAGGACTT...AGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TTGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCACTCATAGTCCAACCTaGCTGCCCTCTTCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: LSCWETPTPSKRSQGQELTHSPT*LPSSEN
Trigger: GTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGT...GAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp ATCTCCACCTCAGCTTGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCACTCATAGTCCAACCTaGCTGCCCTCTTCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: ISTSACPAGRPRPQVSVATHSPT*LPSSEN
Trigger: GTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGT...GGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp AGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCGCCGAGGTTGAGGTATaGGGTTTCTTTGAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: SGERGFPSTLLAGSFYHLAEVEV*GFFEGS
Trigger: GCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGC...GAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp CTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCAGTTGGAAGCCGAGGTaGAGGTATTGGGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LRAGREASQARFSRALSISWKPR*RYWVSL
Trigger: CAAAGAAACCCAATACCTCAACCTCGGCTTCCAACT...GATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp GCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCAGTTGGAAGCCGAGGTaGAGGTATTGGGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: AGREASQARFSRALSIISSWKPR*RYWVSL
Trigger: CAAAGAAACCCAATACCTCAACCTCGGCTTCCAACT...GGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp AAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGGTTATCAGCACTCCCGGTACCGAGTTaGAGACACCTGCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: KPQLPVHGPFEQHAWLSALPVPS*RHLRLG
Trigger: GCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGAG...TGCTGATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CAA 90 bp GTGTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTGGGACAGGATCTGACTaGCTCCAATATAGAGAATAT +
Preference number: 5 (lower is better)
Translates to: VSLRAGREASQARFSRALGTGSD*LQYREY
Trigger: ATATTCTCTATATTGGAGCAAGTCAGATCCTGTCCC...AAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp ATCTCCACCTCAGCTTGTCCTGCTGGGAGACCCCGACCCCAAGTAAGCGTAGCCAGAGTATGGATCTGTTaGAACGTCAGCATCCCGATA +
Preference number: 5 (lower is better)
Translates to: ISTSACPAGRPRPQVSVARVWIC*NVSIPI
Trigger: TATCGGGATGCTGACGTTCAAACAGATCCATACTCT...GGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAGGACAAGCTGAGGTGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS CCA 90 bp TTTAAACCTGGGAACTTTTCTCGTACAGAAAATCATACGCTCGATTaGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCCCGGTACCGAG +
Preference number: 5 (lower is better)
Translates to: FKPGNFSRTENHTLD*RRCGSQPATSPGTE
Trigger: CTCGGTACCGGGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGAGAAAAGTTCCCAGGTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR CAA 90 bp TGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATCTCCCGGTACCGAGTTaGAGACACCTGCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: WRWTLGFPVWDYCEHHYYLPVPS*RHLRLG
Trigger: GCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGAG...ATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp AGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCAGAGTATGGATCTGTTaGAACGTCAGCATCCCGATA +
Preference number: 5 (lower is better)
Translates to: SGERGFPSTLLAGSFYHLRVWIC*NVSIPI
Trigger: TATCGGGATGCTGACGTTCAAACAGATCCATACTCT...GAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR CAA 90 bp GTCACTCAGAGCGGGGAGAGAGGCTTCCCAAGCACGCTTCTCGCGGGCTCTTTCTTTGACAAAGTATTTTaGCACCTCTGGGATCAGAAA +
Preference number: 5 (lower is better)
Translates to: VTQSGERGFPSTLLAGSFFDKVF*HLWDQK
Trigger: TTTCTGATCCCAGAGGTGCAAAAATACTTTGTCAAA...GAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCTGAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TCATGCAAGTTCCTCTGCCGCTGTAAGGCCAGGGTCACTTGCTTCTCGGCTTTTGATGGAGATGGACACTaGGGTTTCCAGTTTGGGACT +
Preference number: 5 (lower is better)
Translates to: SCKFLCRCKARVTCFSAFDGDGH*GFQFGT
Trigger: AGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATC...AAAAGCCGAGAAGCAAGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS GCA 90 bp TGCAGGGCCAGCGGTTGGACCTACACACCATGTTCTGAACGACTCTaGCCCGGAGTAACTTTTGAAGGTAGATCACAGCCATTTCCATTT +
Preference number: 5 (lower is better)
Translates to: CRASGWTYTPCSERL*PGVTFEGRSQPFPF
Trigger: AAATGGAAATGGCTGTGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACATGGTGTGTAGGTCCAACCGCTGGCCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461322.1
CDS-3UTR CAA 90 bp CAAGCACGCTTCTCGCGGGCTCTTTCTATCATCTCCACCTCAGCTTGTCCTGCTAGAGTATGGATCTGTTaGAACGTCAGCATCCCGATA +
Preference number: 5 (lower is better)
Translates to: QARFSRALSIISTSACPARVWIC*NVSIPI
Trigger: TATCGGGATGCTGACGTTCAAACAGATCCATACTCT...AGCAGGACAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000498167.1
CDS-3UTR CAA 90 bp GAGAAAGTCTGCTGTTCCCAGCTGTATAGCATTCCCCTCCCACCTTCTATCCCAGCCGAGGTTGAGGTATaGGGTTTCTTTGAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: EKVCCSQLYSIPLPPSIPAEVEV*GFFEGS
Trigger: GCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGC...TGGGATAGAAGGTGGGAGGGGAATGCTATACAGCTGGGAACAGCAGACTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp TATCCAACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCCTGGTGCAGTGTTTTTaGTCAGTGATCCTCAGGGGG +
Preference number: 5 (lower is better)
Translates to: YPTVPYEPLPTHSPTLLPLVQCF*SVILRG
Trigger: CCCCCTGAGGATCACTGACAAAAAACACTGCACCAG...GGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGTTGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR CAA 90 bp ACTATGGTGAACTTTAACCACCTCCTTAAATATCTCGTCCTCCTCCCGCAGGCGTTTCCAAGGTTGGAGTaGGAAGCCGAGGTTGAGGTA +
Preference number: 5 (lower is better)
Translates to: TMVNFNHLLKYLVLLPQAFPRLE*EAEVEV
Trigger: TACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAA...CGCCTGCGGGAGGAGGACGAGATATTTAAGGAGGTGGTTAAAGTTCACCATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TCTCCTCCTGCAGTCTCACCAGCTCTTTGGACAGGAAGTCAAACATGTCTGCTATCAACCAGTGACACCTaGTGCTCATGCAAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: SPPAVSPALWTGSQTCLLSTSDT*CSCKFL
Trigger: GAGGAACTTGCATGAGCACAAGGTGTCACTGGTTGA...TAGCAGACATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACTGCAGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTGCGAATCAGGGTAGCTaGGATATTTGCCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCANQGS*DICLCM
Trigger: CATACACAGGCAAATATCCAAGCTACCCTGATTCGC...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273390.9
CDS-3UTR CAA 90 bp CCCCTCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTACTCATAGTCCAACCTaGCTGCCCTCTTCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: PLPPSIPSAQPNSLVILCTHSPT*LPSSEN
Trigger: GTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGT...ACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp CATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGGAAGTTGGAAGCCGAGGTaGAGGTATTGGGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: HSSFSSSSQTGRCHSERGSWKPR*RYWVSL
Trigger: CAAAGAAACCCAATACCTCAACCTCGGCTTCCAACT...TCCCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TGGATCTGTTTGAACGTCAGCATCCCGATAATCAGTCTGAGTGCCCACAGTAGATCAACCAGTGACACCTaGTGCTCATGCAAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: WICLNVSIPIISLSAHSRSTSDT*CSCKFL
Trigger: GAGGAACTTGCATGAGCACAAGGTGTCACTGGTTGA...TCTACTGTGGGCACTCAGACTGATTATCGGGATGCTGACGTTCAAACAGATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp ACAGTGCCTTATGAACCTCTGCCAACTCATAGTCCAACCTTGCTGCCCTCTTCAAGTCTCACCAGCTCTTaGGACAGGAAGTCAAACATG +
Preference number: 5 (lower is better)
Translates to: TVPYEPLPTHSPTLLPSSSLTSS*DRKSNM
Trigger: CATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACT...TGAAGAGGGCAGCAAGGTTGGACTATGAGTTGGCAGAGGTTCATAAGGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS TCA 90 bp CAACTCACCCCAAGTAAGCGTAGCCAGGGTCAAGAGCTCAGGGATTaGGTCCTGACATACTACATATTCTGCAGAGTATGGATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: QLTPSKRSQGQELRD*VLTYYIFCRVWICL
Trigger: CAAACAGATCCATACTCTGCAGAATATGTAGTATGTCAGGACTCAATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CAA 90 bp TCTTTACTTCAAGAACTTTATTCTTCTTATCCAACAGTGCCTTATGAACCTCTGCTCCCGGTACCGAGTTaGAGACACCTGCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SLLQELYSSYPTVPYEPLLPVPS*RHLRLG
Trigger: GCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGAG...CAGAGGTTCATAAGGCACTGTTGGATAAGAAGAATAAAGTTCTTGAAGTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TCCCACCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: SHLLSHQPNLTHLSFCVLKSYAR*EEMWLP
Trigger: TGGGAGCCACATCTCCTCCAATCGAGCGTATGATTT...GAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp TGCGCAACTCCTGGATCAACTCCAGTCGCTTTTCTTTCCCTTCAAACATCATGTAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: CATPGSTPVAFLSLQTSCKSYAR*EEMWLP
Trigger: TGGGAGCCACATCTCCTCCAATCGAGCGTATGATTT...ACATGATGTTTGAAGGGAAAGAAAAGCGACTGGAGTTGATCCAGGAGTTGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACTTTCCAAGGTTGGAGTaGGAAGCCGAGGTTGAGGTA +
Preference number: 5 (lower is better)
Translates to: FCSDGDGHLGFQFGTIVNFPRLE*EAEVEV
Trigger: TACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAA...GTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS GCA 90 bp CTTTTGAACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTaGAAGAATATGTTTCCGCTGTGCGTTCCTCACGCACTTGAGTTT +
Preference number: 5 (lower is better)
Translates to: LLNHAFRVTVDDLMG*KNMFPLCVPHALEF
Trigger: AAACTCAAGTGCGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475543.1
CDS-3UTR CAA 90 bp AGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGCGAATCAGGGTAGCTaGGATATTTGCCTGTGTATG +
Preference number: 5 (lower is better)
Translates to: SNTVNHNCLYMGHLNSMRANQGS*DICLCM
Trigger: CATACACAGGCAAATATCCAAGCTACCCTGATTCGC...ACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CAA 90 bp GAACGACTCTGCCCCGGAGTAACTTTTGAAGGTAGATCACAGCCATTTCCATTTAAGTCCTCTGAGTTGTaGTCTGGGAAACACCCAAGA +
Preference number: 5 (lower is better)
Translates to: ERLCPGVTFEGRSQPFPFKSSEL*SGKHPR
Trigger: TCTTGGGTGTTTCCCAGACAACAACTCAGAGGACTT...AAATGGAAATGGCTGTGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACTCATAGTCCAACCTaGCTGCCCTCTTCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: FCSDGDGHLGFQFGTIVNTHSPT*LPSSEN
Trigger: GTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGT...GTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp AGTGTATGGTTCTGCCTTGGATACGGCATAAACAACATTGAATGGCATCTGCTGTCAACCAGTGACACCTaGTGCTCATGCAAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: SVWFCLGYGINNIEWHLLSTSDT*CSCKFL
Trigger: GAGGAACTTGCATGAGCACAAGGTGTCACTGGTTGA...CAGCAGATGCCATTCAATGTTGTTTATGCCGTATCCAAGGCAGAACCATACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS GCA 90 bp CTTTTGAACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTaGAAGAATATGTTTCCGCTGTGCGTTCCTCACTATTCAGCATTG +
Preference number: 5 (lower is better)
Translates to: LLNHAFRVTVDDLMG*KNMFPLCVPHYSAL
Trigger: CAATGCTGAATAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472117.5
ENST00000496010.5
CDS-3UTR CAA 90 bp TGCATGAACACACTTCTTAGATCTAAAGCTCAAAGGTGGGTTGATGTGCCACTGAAGTCCTCTGAGTTGTaGTCTGGGAAACACCCAAGA +
Preference number: 5 (lower is better)
Translates to: CMNTLLRSKAQRWVDVPLKSSEL*SGKHPR
Trigger: TCTTGGGTGTTTCCCAGACAACAACTCAGAGGACTT...CAGTGGCACATCAACCCACCTTTGAGCTTTAGATCTAAGAAGTGTGTTCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp TCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGGTTCAGAAAACCAGCTTaGGTGGTAATGACTTTAGGT +
Preference number: 5 (lower is better)
Translates to: SFIIFLLFSNWEVSLRAGFRKPA*VVMTLG
Trigger: ACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAA...CCCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp ACTATGGTGAACTTTAACCACCTCCTTAAATATCTCGTCCTCCTCCCGCAGGCGTTCAGAAAACCAGCTTaGGTGGTAATGACTTTAGGT +
Preference number: 5 (lower is better)
Translates to: TMVNFNHLLKYLVLLPQAFRKPA*VVMTLG
Trigger: ACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAA...CGCCTGCGGGAGGAGGACGAGATATTTAAGGAGGTGGTTAAAGTTCACCATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp GGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATAAGTCTCACCAGCTCTTaGGACAGGAAGTCAAACATG +
Preference number: 5 (lower is better)
Translates to: GDGHLGFQFGTIVNTTTISLTSS*DRKSNM
Trigger: CATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACT...TATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp TATAGTTTTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATGATGGAGATGGACACTaGGGTTTCCAGTTTGGGACT +
Preference number: 5 (lower is better)
Translates to: YSFLFRWRWTLGFPVWDYDGDGH*GFQFGT
Trigger: AGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATC...ATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp TTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACGTCATTTTAATCTCTTaGCCCATTCCTTCCCATCCC +
Preference number: 5 (lower is better)
Translates to: FCSDGDGHLGFQFGTIVNVILIS*PIPSHP
Trigger: GGGATGGGAAGGAATGGGCAAAGAGATTAAAATGAC...GTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp GAGCAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCTGGTGCAGTGTTTTTaGTCAGTGATCCTCAGGGGG +
Preference number: 5 (lower is better)
Translates to: EQCTPWEKCRLLELFMMILVQCF*SVILRG
Trigger: CCCCCTGAGGATCACTGACAAAAAACACTGCACCAG...AATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp AAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTGGTTATCAGCACACTGTAAACCACAATaGCCTGTACATGGGCCATTT +
Preference number: 5 (lower is better)
Translates to: KPQLPVHGPFEQHAWLSAHCKPQ*PVHGPF
Trigger: AAATGGCCCATGTACAGGCAATTGTGGTTTACAGTG...TGCTGATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS CCA 90 bp TGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTaGTTATCAGCATCGTCATCTGCCAATAGTCAGGAGATTTACCAA +
Preference number: 5 (lower is better)
Translates to: CKPQLPVHGPFEQHA*LSASSSANSQEIYQ
Trigger: TTGGTAAATCTCCTGACTATTGGCAGATGACGATGCTGATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CAA 90 bp CCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGATGGGGGACAGGATCTGACTaGCTCCAATATAGAGAATAT +
Preference number: 5 (lower is better)
Translates to: PSIPSAQPNSLVILCSRWGTGSD*LQYREY
Trigger: ATATTCTCTATATTGGAGCAAGTCAGATCCTGTCCC...CCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp TGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATAGAGTATGGATCTGTTaGAACGTCAGCATCCCGATA +
Preference number: 5 (lower is better)
Translates to: WRWTLGFPVWDYCEHHYYRVWIC*NVSIPI
Trigger: TATCGGGATGCTGACGTTCAAACAGATCCATACTCT...ATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp CTTCAGAAAACCAGCTTTGGTGGTAATGACTTTAGGTTTTGGAGCTCTGATTTGGCCGAGGTTGAGGTATaGGGTTTCTTTGAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: LQKTSFGGNDFRFWSSDLAEVEV*GFFEGS
Trigger: GCTTCCTTCAAAGAAACCCAATACCTCAACCTCGGC...CAAATCAGAGCTCCAAAACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTTCAACCAGTGACACCTaGTGCTCATGCAAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRSTSDT*CSCKFL
Trigger: GAGGAACTTGCATGAGCACAAGGTGTCACTGGTTGA...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TTTCCGCTGTGCGTTCCTCACTTTTTCTTTGACAAAGTATTTTTGCACCTCTGGAGTCTCACCAGCTCTTaGGACAGGAAGTCAAACATG +
Preference number: 5 (lower is better)
Translates to: FPLCVPHFFFDKVFLHLWSLTSS*DRKSNM
Trigger: CATGTTTGACTTCCTGTCCAAAGAGCTGGTGAGACT...CCAGAGGTGCAAAAATACTTTGTCAAAGAAAAAGTGAGGAACGCACAGCGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TGTTGTCTGGGAAACACCCAAGACGAGACAGAGGTCCATAGACCTGTGATGCATTTTGACAAAGTATTTTaGCACCTCTGGGATCAGAAA +
Preference number: 5 (lower is better)
Translates to: CCLGNTQDETEVHRPVMHFDKVF*HLWDQK
Trigger: TTTCTGATCCCAGAGGTGCAAAAATACTTTGTCAAA...ATGCATCACAGGTCTATGGACCTCTGTCTCGTCTTGGGTGTTTCCCAGACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TTCTTCATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATCCCAACCTAACTCACTaGTCATTTTGTGTTCTCGAT +
Preference number: 5 (lower is better)
Translates to: FFIGRHFQGWSWKPRLRYPNLTH*SFCVLD
Trigger: ATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGG...ATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS-3UTR CAA 90 bp TATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGCTGTACATGGGCCATTaGAACAGCATGCGTGGTTAT +
Preference number: 5 (lower is better)
Translates to: YSNTVNHNCLYMGHLNSMLYMGH*NSMRGY
Trigger: ATAACCACGCATGCTGTTCAAATGGCCCATGTACAG...CATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CAA 90 bp ACTTTATATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: TLYSNTVNHNCLYMGHLNKSYAR*EEMWLP
Trigger: TGGGAGCCACATCTCCTCCAATCGAGCGTATGATTT...GTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATATAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CAA 90 bp TATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGAGAGTATGGATCTGTTaGAACGTCAGCATCCCGATA +
Preference number: 5 (lower is better)
Translates to: YSNTVNHNCLYMGHLNSMRVWIC*NVSIPI
Trigger: TATCGGGATGCTGACGTTCAAACAGATCCATACTCT...CATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CAA 90 bp TTCTTCATTGGACGTCATTTCCAAGGTTGGAGTTGGAAGCCGAGGTTGAGGTATTTCAGAAAACCAGCTTaGGTGGTAATGACTTTAGGT +
Preference number: 5 (lower is better)
Translates to: FFIGRHFQGWSWKPRLRYFRKPA*VVMTLG
Trigger: ACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAA...ATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTAGTTGGAAGCCGAGGTaGAGGTATTGGGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRSWKPR*RYWVSL
Trigger: CAAAGAAACCCAATACCTCAACCTCGGCTTCCAACT...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp ATCCTGAGTCATGGAATATGCACATTTTCAGCCTTAGTAGATAATGCCAATGTCTTTCCAAGGTTGGAGTaGGAAGCCGAGGTTGAGGTA +
Preference number: 5 (lower is better)
Translates to: ILSHGICTFSALVDNANVFPRLE*EAEVEV
Trigger: TACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAA...GACATTGGCATTATCTACTAAGGCTGAAAATGTGCATATTCCATGACTCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp TTCATTCATCATTTTCCTCCTCTTCTCAAACTGGGAGGTGTCACTCAGAGCGGGTTTGACAAAGTATTTTaGCACCTCTGGGATCAGAAA +
Preference number: 5 (lower is better)
Translates to: FIHHFPPLLKLGGVTQSGFDKVF*HLWDQK
Trigger: TTTCTGATCCCAGAGGTGCAAAAATACTTTGTCAAA...CCCGCTCTGAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS CCA 90 bp CTCAGTCTGCTGCGAATCAGGGTAGCTTGGATATTTGCCTGTGTATaGTCTTTCTCACTTGACACAATAAACAATGGATCGTACAGAAAA +
Preference number: 5 (lower is better)
Translates to: LSLLRIRVAWIFACV*SFSLDTINNGSYRK
Trigger: TTTTCTGTACGATCCATTGTTTATTGTGTCAAGTGAGAAAGACCATACACAGGCAAATATCCAAGCTACCCTGATTCGCAGCAGACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000463700.1
ENST00000468630.5
ENST00000469659.5
CDS-3UTR CAA 90 bp TATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTTGAACAGCATGGGGACAGGATCTGACTaGCTCCAATATAGAGAATAT +
Preference number: 5 (lower is better)
Translates to: YSNTVNHNCLYMGHLNSMGTGSD*LQYREY
Trigger: ATATTCTCTATATTGGAGCAAGTCAGATCCTGTCCC...CATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS-3UTR CAA 90 bp AACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATATGTTTGGGACAGGATCTGACTaGCTCCAATATAGAGAATAT +
Preference number: 5 (lower is better)
Translates to: NHAFRVTVDDLMGCKNMFGTGSD*LQYREY
Trigger: ATATTCTCTATATTGGAGCAAGTCAGATCCTGTCCC...AAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp CAGTGCACACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTAGAGTATGGATCTGTTaGAACGTCAGCATCCCGATA +
Preference number: 5 (lower is better)
Translates to: QCTPWEKCRLLELFMMIRRVWIC*NVSIPI
Trigger: TATCGGGATGCTGACGTTCAAACAGATCCATACTCT...ACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGTGTGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273390.9
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATTTCAGAAAACCAGCTTaGGTGGTAATGACTTTAGGT +
Preference number: 5 (lower is better)
Translates to: WRWTLGFPVWDYCEHHYYFRKPA*VVMTLG
Trigger: ACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAA...ATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp CCTTCTATCCCATCAGCCCAACCTAACTCACTTGTCATTTTGTGTTCTCGATGGATTTCTTCTTCTTCATaGGACGTCATTTCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: PSIPSAQPNSLVILCSRWISSSS*DVISKV
Trigger: AACCTTGGAAATGACGTCCAATGAAGAAGAAGAAAT...CCATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGGCTGATGGGATAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS CCA 90 bp GGACTTAGCTGTTGTTCTCATTTTGAGTTTCTTTCTCAAGTAACATaGCAGCATTTGAGGCCTCATCTTGCTCTCCCTCAGTTAATTTCT +
Preference number: 5 (lower is better)
Translates to: GLSCCSHFEFLSQVT*QHLRPHLALPQLIS
Trigger: AGAAATTAACTGAGGGAGAGCAAGATGAGGCCTCAAATGCTGCCATGTTACTTGAGAAAGAAACTCAAAATGAGAACAACAGCTAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482995.5
ENST00000496010.5
CDS-3UTR CAA 90 bp GGGGTTGTGTCACAAAATCTGGGAGACATGACTCAAGTTCCACTAATCCTTCATATTTCTTCTTCTTCATaGGACGTCATTTCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: GVVSQNLGDMTQVPLILHISSSS*DVISKV
Trigger: AACCTTGGAAATGACGTCCAATGAAGAAGAAGAAAT...ATGAAGGATTAGTGGAACTTGAGTCATGTCTCCCAGATTTTGTGACACAACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp ACCTTGGGAGAAGTGCAGACTATTGGAATTATTTATGATGATTCGTACAGCTTCGTCATTTTAATCTCTTaGCCCATTCCTTCCCATCCC +
Preference number: 5 (lower is better)
Translates to: TLGEVQTIGIIYDDSYSFVILIS*PIPSHP
Trigger: GGGATGGGAAGGAATGGGCAAAGAGATTAAAATGAC...GAAGCTGTACGAATCATCATAAATAATTCCAATAGTCTGCACTTCTCCCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp AACCATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTGCAAGAATATGTTTATTTCTTCTTCTTCATaGGACGTCATTTCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: NHAFRVTVDDLMGCKNMFISSSS*DVISKV
Trigger: AACCTTGGAAATGACGTCCAATGAAGAAGAAGAAAT...AAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
CDS-3UTR CAA 90 bp TATAGTTTTCTGTTCCGATGGAGATGGACACTTGGGTTTCCAGTTTGGGACTATTTTGACAAAGTATTTTaGCACCTCTGGGATCAGAAA +
Preference number: 5 (lower is better)
Translates to: YSFLFRWRWTLGFPVWDYFDKVF*HLWDQK
Trigger: TTTCTGATCCCAGAGGTGCAAAAATACTTTGTCAAA...ATAGTCCCAAACTGGAAACCCAAGTGTCCATCTCCATCGGAACAGAAAACTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp ATCCTGAGTCATGGAATATGCACATTTTCAGCCTTAGTAGATAATGCCAATGTCCCTTCCCATCCCATGTaGGATCACTTAATAAATGTG +
Preference number: 5 (lower is better)
Translates to: ILSHGICTFSALVDNANVPSHPM*DHLINV
Trigger: CACATTTATTAAGTGATCCAACATGGGATGGGAAGG...GACATTGGCATTATCTACTAAGGCTGAAAATGTGCATATTCCATGACTCAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS-3UTR CAA 90 bp ATAGGTCATCTACAGCTAACTTCTGTCATTTTAATCTCTTTGCCCATTCCTTCCCCTTCCCATCCCATGTaGGATCACTTAATAAATGTG +
Preference number: 5 (lower is better)
Translates to: IGHLQLTSVILISLPIPSPSHPM*DHLINV
Trigger: CACATTTATTAAGTGATCCAACATGGGATGGGAAGG...GGAAGGAATGGGCAAAGAGATTAAAATGACAGAAGTTAGCTGTAGATGACCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS TCA 90 bp TTCAAGGGAAAGACCTTGTATATACGCACTATGCCAATTTGCAAGTaGAAGAAGCAATACATTTATACCATCTCCCATATTTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: FKGKTLYIRTMPICK*KKQYIYTISHIWCT
Trigger: AGTGCACCAAATATGGGAGATGGTATAAATGTATTGCTTCTTTCACTTGCAAATTGGCATAGTGCGTATATACAAGGTCTTTCCCTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483134.5
CDS-3UTR CAA 90 bp TTCCAGTTTGGGACTATTGTGAACACCACTACTATAAATATTTTTGTCATGCCTCCCAACCTAACTCACTaGTCATTTTGTGTTCTCGAT +
Preference number: 5 (lower is better)
Translates to: FQFGTIVNTTTINIFVMPPNLTH*SFCVLD
Trigger: ATCGAGAACACAAAATGACAAGTGAGTTAGGTTGGG...AGGCATGACAAAAATATTTATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS TCA 90 bp AATCAGGGTAGCTTGGATATTTGCCTGTGTATGGTCTTTCTCACTTaGCACAATAAACAATGGATCTGCAAAATAAACAATCAAGTAGCA +
Preference number: 5 (lower is better)
Translates to: NQGSLDICLCMVFLT*HNKQWICKINNQVA
Trigger: TGCTACTTGATTGTTTATTTTGCAGATCCATTGTTTATTGTGTCAAGTGAGAAAGACCATACACAGGCAAATATCCAAGCTACCCTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483134.5
CDS-3UTR CAA 90 bp GGGTTTCCAGTTTGGGACTATTGTGAACACCACTACTATAAATATTTTTGTCATATTTCTTCTTCTTCATaGGACGTCATTTCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: GFPVWDYCEHHYYKYFCHISSSS*DVISKV
Trigger: AACCTTGGAAATGACGTCCAATGAAGAAGAAGAAAT...ATGACAAAAATATTTATAGTAGTGGTGTTCACAATAGTCCCAAACTGGAAACCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273390.9
ENST00000482573.5
CDS CAA 90 bp GGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCCCGGTACCGAGTTaGAGACACCTGCGGCTGGGCCTGGGGCTCCTCGATGGTTACTGC +
Preference number: 6 (lower is better)
Translates to: GGDVAPSPRPLPVPS*RHLRLGLGLLDGYC
Trigger: GCAGTAACCATCGAGGAGCCCCAGGCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273390.9
ENST00000463700.1
ENST00000468630.5
ENST00000469659.5
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000488533.5
CDS CCA 72 bp GGGCCTGGGGCTCCTCGATGGTTACTGCGTGGCTCATaGTGCCGCCTCTTTCCTCCCGCCAGCAAGGGACCA +
Preference number: 6 (lower is better)
Translates to: GPGAPRWLLRGS*CRLFPPASKGP
Trigger: TGGTCCCTTGCTGGCGGGAGGAAAGAGGCGGCACCATGAGCCACGCAGTAACCATCGAGGAGCCCCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273390.9
ENST00000463700.1
ENST00000468630.5
ENST00000469659.5
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000488533.5
CDS CCA 72 bp TGCGGCTGGGCCTGGGGCTCCTCGATGGTTACTGCGTaGCTCATGGTGCCGCCTCTTTCCTCCCGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: CGWAWGSSMVTA*LMVPPLSSRQQ
Trigger: TTGCTGGCGGGAGGAAAGAGGCGGCACCATGAGCCACGCAGTAACCATCGAGGAGCCCCAGGCCCAGCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273390.9
ENST00000463700.1
ENST00000468630.5
ENST00000469659.5
ENST00000475093.5
ENST00000482573.5
ENST00000482927.5
ENST00000488533.5
CDS CAA 90 bp GAAGGTCTGCGGCGGTCCTTACCGTACAGAAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCCCGGTACCGA +
Preference number: 6 (lower is better)
Translates to: EGLRRSLPYRKSYAR*EEMWLPARDLSRYR
Trigger: TCGGTACCGGGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGGTAAGGACCGCCGCAGACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS GCA 72 bp ATCTGGCCTAGGAGGCGACGGACGCGGAGGAAGGTCTaGGGCGGTCCTTACCGTACAGAAAATCATACGCTC +
Preference number: 6 (lower is better)
Translates to: IWPRRRRTRRKV*GGPYRTENHTL
Trigger: GAGCGTATGATTTTCTGTACGGTAAGGACCGCCGCAGACCTTCCTCCGCGTCCGTCGCCTCCTAGGCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS CCA 72 bp GGCGGTCCTTACCGTACAGAAAATCATACGCTCGATTaGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCCC +
Preference number: 6 (lower is better)
Translates to: GGPYRTENHTLD*RRCGSQPATSP
Trigger: GGGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGGTAAGGACCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS CAA 72 bp CGGCGGTCCTTACCGTACAGAAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCC +
Preference number: 6 (lower is better)
Translates to: RRSLPYRKSYAR*EEMWLPARDLS
Trigger: GGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGGTAAGGACCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS CCA 72 bp ACAGCAAGAAGGCCCTCACCGACACTGACTGCCCATTaGACTGCCTTGCTTCTTGGACTGCCCAGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: TARRPSPTLTAH*TALLLGLPSLQ
Trigger: CTGAAGGCTGGGCAGTCCAAGAAGCAAGGCAGTCCAATGGGCAGTCAGTGTCGGTGAGGGCCTTCTTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469659.5
CDS CCA 72 bp CCGTACAGAAAATCATACGCTCGATTGGAGGAGATGTaGCTCCCAGCCCGCGACCTCTCCCGGTACCGAGTT +
Preference number: 6 (lower is better)
Translates to: PYRKSYARLEEM*LPARDLSRYRV
Trigger: AACTCGGTACCGGGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482927.5
CDS CAA 72 bp CACAGCAAGAAGGCCCTCACCGACACTGACTGCCCATaGGACTGCCTTGCTTCTTGGACTGCCCAGCCTTCA +
Preference number: 6 (lower is better)
Translates to: HSKKALTDTDCP*DCLASWTAQPS
Trigger: TGAAGGCTGGGCAGTCCAAGAAGCAAGGCAGTCCAATGGGCAGTCAGTGTCGGTGAGGGCCTTCTTGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469659.5
CDS CCA 72 bp TCGTACAGAAAATCATACGCTCGATTGGAGGAGATGTaGCTCCCAGCCCGCGACCTCTCCCGGTACCGAGTT +
Preference number: 6 (lower is better)
Translates to: SYRKSYARLEEM*LPARDLSRYRV
Trigger: AACTCGGTACCGGGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273390.9
ENST00000463700.1
ENST00000468630.5
ENST00000469659.5
ENST00000475093.5
ENST00000482573.5
ENST00000488533.5
CDS CCA 72 bp GAAGCGTCAGTTCGTACAGAAAATCATACGCTCGATTaGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCCC +
Preference number: 6 (lower is better)
Translates to: EASVRTENHTLD*RRCGSQPATSP
Trigger: GGGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGAACTGACGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475093.5
CDS CAA 72 bp AGGCCCTCACCGACACTGACTGCCCATTGGACTGCCTaGCTTCTTGGACTGCCCAGCCTTCAGAACTTCAAG +
Preference number: 6 (lower is better)
Translates to: RPSPTLTAHWTA*LLGLPSLQNFK
Trigger: CTTGAAGTTCTGAAGGCTGGGCAGTCCAAGAAGCAAGGCAGTCCAATGGGCAGTCAGTGTCGGTGAGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469659.5
CDS TCA 72 bp CATGTGAAGACACAGCAAGAAGGCCCTCACCGACACTaGCTGCCCATTGGACTGCCTTGCTTCTTGGACTGC +
Preference number: 6 (lower is better)
Translates to: HVKTQQEGPHRH*LPIGLPCFLDC
Trigger: GCAGTCCAAGAAGCAAGGCAGTCCAATGGGCAGTCAGTGTCGGTGAGGGCCTTCTTGCTGTGTCTTCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469659.5
CDS GCA 72 bp AAGAAGGCCCTCACCGACACTGACTGCCCATTGGACTaGCTTGCTTCTTGGACTGCCCAGCCTTCAGAACTT +
Preference number: 6 (lower is better)
Translates to: KKALTDTDCPLD*LASWTAQPSEL
Trigger: AAGTTCTGAAGGCTGGGCAGTCCAAGAAGCAAGGCAGTCCAATGGGCAGTCAGTGTCGGTGAGGGCCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469659.5
CDS CCA 72 bp GGGAACTTTTCTCGTACAGAAAATCATACGCTCGATTaGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCCC +
Preference number: 6 (lower is better)
Translates to: GNFSRTENHTLD*RRCGSQPATSP
Trigger: GGGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGAGAAAAGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS CAA 72 bp AGAAGCGTCAGTTCGTACAGAAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCC +
Preference number: 6 (lower is better)
Translates to: RSVSSYRKSYAR*EEMWLPARDLS
Trigger: GGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGAACTGACGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475093.5
CDS CAA 90 bp CATCTGAAAAGAAGCGTCAGTTCGTACAGAAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCCCGGTACCGA +
Preference number: 6 (lower is better)
Translates to: HLKRSVSSYRKSYAR*EEMWLPARDLSRYR
Trigger: TCGGTACCGGGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGAACTGACGCTTCTTTTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475093.5
CDS CAA 72 bp TGGGAACTTTTCTCGTACAGAAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCC +
Preference number: 6 (lower is better)
Translates to: WELFSYRKSYAR*EEMWLPARDLS
Trigger: GGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGAGAAAAGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482573.5
CDS CAA 90 bp CTTGACACAATAAACAATGGATCGTACAGAAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCCCGGTACCGA +
Preference number: 6 (lower is better)
Translates to: LDTINNGSYRKSYAR*EEMWLPARDLSRYR
Trigger: TCGGTACCGGGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGATCCATTGTTTATTGTGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273390.9
ENST00000463700.1
ENST00000468630.5
ENST00000469659.5
ENST00000488533.5
CDS GCA 72 bp AGCGGTTGGACCTACACACCATGTTCTGAACGACTCTaGCCCGGAGTAACTTTTGAAGGTAGATCACAGCCA +
Preference number: 6 (lower is better)
Translates to: SGWTYTPCSERL*PGVTFEGRSQP
Trigger: TGGCTGTGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACATGGTGTGTAGGTCCAACCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461322.1
CDS CAA 72 bp ATAAACAATGGATCGTACAGAAAATCATACGCTCGATaGGAGGAGATGTGGCTCCCAGCCCGCGACCTCTCC +
Preference number: 6 (lower is better)
Translates to: INNGSYRKSYAR*EEMWLPARDLS
Trigger: GGAGAGGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGATCCATTGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273390.9
ENST00000463700.1
ENST00000468630.5
ENST00000469659.5
ENST00000488533.5
CDS GCA 72 bp CATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTaGAAGAATATGTTTCCGCTGTGCGTTCCTCACGCA +
Preference number: 6 (lower is better)
Translates to: HAFRVTVDDLMG*KNMFPLCVPHA
Trigger: TGCGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475543.1
CDS GCA 72 bp ATATTGTCTGACTCTGCAGCAGCTCATGCTCTGTTGTaGATGTGGCCCTGTTACTCTACCACTTCTACCAGC +
Preference number: 6 (lower is better)
Translates to: ILSDSAAAHALL*MWPCYSTTSTS
Trigger: GCTGGTAGAAGTGGTAGAGTAACAGGGCCACATGCACAACAGAGCATGAGCTGCTGCAGAGTCAGACAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483134.5
CDS CCA 72 bp AATTTATTCTCAAAAGAGAAATGCAGGGCCAGCGGTTaGACCTACACACCATGTTCTGAACGACTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: NLFSKEKCRASG*TYTPCSERLCP
Trigger: GGGGCAGAGTCGTTCAGAACATGGTGTGTAGGTCCAACCGCTGGCCCTGCATTTCTCTTTTGAGAATAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461322.1
CDS CCA 72 bp CAATTGCCTGTACATGGGCCATTTGAACAGCATGCGTaGTTATCAGCATCGTCATCTGCCAATAGTCAGGAG +
Preference number: 6 (lower is better)
Translates to: QLPVHGPFEQHA*LSASSSANSQE
Trigger: CTCCTGACTATTGGCAGATGACGATGCTGATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS GCA 72 bp CATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTaGAAGAATATGTTTCCGCTGTGCGTTCCTCACTAT +
Preference number: 6 (lower is better)
Translates to: HAFRVTVDDLMG*KNMFPLCVPHY
Trigger: ATAGTGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472117.5
ENST00000496010.5
CDS GCA 72 bp CATGCTTTCCGTGTAACTGTGGATGATCTGATGGGCTaGAAGAATATGTTTCCGCTGTGCGTTCCTCATGAT +
Preference number: 6 (lower is better)
Translates to: HAFRVTVDDLMG*KNMFPLCVPHD
Trigger: ATCATGAGGAACGCACAGCGGAAACATATTCTTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482995.5
CDS CAA 72 bp AACACTGTAAACCACAATTGCCTGTACATGGGCCATTaGAACAGCATGCGTGGTTATCAGCATCGTCATCTG +
Preference number: 6 (lower is better)
Translates to: NTVNHNCLYMGH*NSMRGYQHRHL
Trigger: CAGATGACGATGCTGATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS TCA 72 bp TCCCAAGTAGACTTGTCTCTGGGGAGGCAAATACCCTaGCCAGCTAGTCTAGATAACATGGTAACACATATT +
Preference number: 6 (lower is better)
Translates to: SQVDLSLGRQIP*PASLDNMVTHI
Trigger: AATATGTGTTACCATGTTATCTAGACTAGCTGGTCAGGGTATTTGCCTCCCCAGAGACAAGTCTACTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483134.5
CDS CAA 90 bp TTATATAGCAACACTGTAAACCACAATTGCCTGTACATGGGCCATTaGAACAGCATGCGTGGTTATCAGCATCGTCATCTGCCAATAGTC +
Preference number: 6 (lower is better)
Translates to: LYSNTVNHNCLYMGH*NSMRGYQHRHLPIV
Trigger: GACTATTGGCAGATGACGATGCTGATAACCACGCATGCTGTTCAAATGGCCCATGTACAGGCAATTGTGGTTTACAGTGTTGCTATATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463700.1
CDS CAA 90 bp GTTGTGCATGTGGCCCTGTTACTCTACCACTTCTACCAGCAACAGTaGTCAAGATGTTTTTCTTTTCTGAGTATTCCAAGTCAGCTTACG +
Preference number: 6 (lower is better)
Translates to: VVHVALLLYHFYQQQ*SRCFSFLSIPSQLT
Trigger: CGTAAGCTGACTTGGAATACTCAGAAAAGAAAAACATCTTGACAACTGTTGCTGGTAGAAGTGGTAGAGTAACAGGGCCACATGCACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483134.5
CDS CAA 72 bp GTGGCCCTGTTACTCTACCACTTCTACCAGCAACAGTaGTCAAGATGTTTTTCTTTTCTGAGTATTCCAAGT +
Preference number: 6 (lower is better)
Translates to: VALLLYHFYQQQ*SRCFSFLSIPS
Trigger: ACTTGGAATACTCAGAAAAGAAAAACATCTTGACAACTGTTGCTGGTAGAAGTGGTAGAGTAACAGGGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483134.5
CDS TCA 72 bp AAGACCTTGTATATACGCACTATGCCAATTTGCAAGTaGAAGAAGCAATACATTTATACCATCTCCCATATT +
Preference number: 6 (lower is better)
Translates to: KTLYIRTMPICK*KKQYIYTISHI
Trigger: AATATGGGAGATGGTATAAATGTATTGCTTCTTTCACTTGCAAATTGGCATAGTGCGTATATACAAGGTCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483134.5