RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP70 (Homo sapiens)

Ensembl gene IDs: ENSG00000156042

Ensembl transcript IDs: ENST00000310715.7, ENST00000340329.7, ENST00000355577.8, ENST00000394865.2, ENST00000433268.5, ENST00000462684.5, ENST00000493787.6, ENST00000495161.5

Found 481 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGAACTCAGAGTCCCATaGAGAAAATTGTTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: EDSFVLQLQASYGKTLWEELRVP*RKLFSW
Trigger: CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTC...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
3UTR-3UTR GCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAGAACTCAGAGTCCCATaGAGAAAATTGTTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVELRVP*RKLFSW
Trigger: CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTC...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
3UTR-3UTR GCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTGAACTCAGAGTCCCATaGAGAAAATTGTTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTELRVP*RKLFSW
Trigger: CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTC...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
3UTR-3UTR GCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTGAACTCAGAGTCCCATaGAGAAAATTGTTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSELRVP*RKLFSW
Trigger: CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTC...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
3UTR-3UTR GCA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATGAACTCAGAGTCCCATaGAGAAAATTGTTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYELRVP*RKLFSW
Trigger: CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTC...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGCTCGCGATAACCCTCTaGGGCCGGGAGCAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGLAITL*GREQGA
Trigger: CGCTCCCTGCTCCCGGCCCCAGAGGGTTATCGCGAG...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGTGCAGCTCCTGGTCCTaGTGGGGCTTCCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGCSSWS*WGFHLD
Trigger: ATCAAGGTGGAAGCCCCAGCAGGACCAGGAGCTGCA...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGAGCTCCTGGTCCTGCTaGGGCTTCCACCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGSSWSC*GFHLDC
Trigger: GCAATCAAGGTGGAAGCCCCAGCAGGACCAGGAGCT...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGCACGAGTCTGCCTGCTaGTGGCACTTGCTCCATATC +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGHESAC*WHLLHI
Trigger: GATATGGAGCAAGTGCCATCAGCAGGCAGACTCGTG...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGATCCCTCTGTCACGGTaGTCTGCACGAGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKIPLSR*SARVCL
Trigger: CAGGCAGACTCGTGCAGATCACCGTGACAGAGGGAT...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGCATCCTCAGCCTCTGTaGGCTCCTCCAGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLHPQPL*APPADS
Trigger: GCTATCGGCTGGAGGAGCTCACAGAGGCTGAGGATG...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAACATCCTCAGCCTCTGTaGGCTCCTCCAGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWEHPQPL*APPADS
Trigger: GCTATCGGCTGGAGGAGCTCACAGAGGCTGAGGATG...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGTCACTCACTGCCTTCTaGGCTCCTCCTGTCCGACGG +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWSLTAF*APPVRR
Trigger: CCGTCGGACAGGAGGAGCTCAGAAGGCAGTGAGTGA...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355577.8
CDS-3UTR TCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGCACGAGTCTGCCTGCTaGTGGCACTTGCTCCATATC +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWHESAC*WHLLHI
Trigger: GATATGGAGCAAGTGCCATCAGCAGGCAGACTCGTG...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGATCCCTCTGTCACGGTaGTCTGCACGAGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWIPLSR*SARVCL
Trigger: CAGGCAGACTCGTGCAGATCACCGTGACAGAGGGAT...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTGTGAGCGAGGTCATCTaGAGTGATTCCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGVSEVI*SDSSFR
Trigger: CCTGAAGGAGGAATCACTTCAGATGACCTCGCTCAC...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTCCTTCTCTCCAAGTaGTGGAACTTGCAGACCGAC +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGVLLSK*WNLQTD
Trigger: GTCGGTCTGCAAGTTCCATCACTTGGAGAGAAGGAC...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGCCAGAGGAACTCTTGTaGTCTCTACAGGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGPEELL*SLQAKA
Trigger: GGCTTTGGCCTGTAGAGATCACAAGAGTTCCTCTGG...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGCCTGCTGATGGCACTTaGTCCATATCACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGPADGT*SISPTG
Trigger: CCCAGTTGGTGATATGGAGCAAGTGCCATCAGCAGG...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTCTGAGATCTGGGCTGTaGTCAGTAAAGGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGLRSGL*SVKALP
Trigger: TGGCAGAGCCTTTACTGACCACAGCCCAGATCTCAG...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTAGGTCCACCACAGCCTaGCCAAGAATTAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGRSTTA*PRIKVF
Trigger: GAAGACCTTAATTCTTGGTCAGGCTGTGGTGGACCT...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAAAGCAGCCTCCAACGTaGCCTTCAGTAGATTGCCCC +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWEKQPPT*PSVDCP
Trigger: GGGGCAATCTACTGAAGGTCACGTTGGAGGCTGCTT...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGCAGGACCTGTTGGAATaGAGGATTCAGGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGQDLLE*RIQAQS
Trigger: ACTCTGTGCCTGAATCCTTCATTCCAACAGGTCCTG...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTTCTCTTCCAGATAGATaGGCCCCAGTCTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGSLPDR*APVSGR
Trigger: TCTTCCTGAGACTGGGGCTCATCTATCTGGAAGAGA...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGCCTGCTGATGGCACTTaGTCCATATCACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKPADGT*SISPTG
Trigger: CCCAGTTGGTGATATGGAGCAAGTGCCATCAGCAGG...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTCTGTCACGGTGATCTaGACGAGTCTGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWSVTVI*TSLPAD
Trigger: ATCAGCAGGCAGACTCGTGCAGATCACCGTGACAGA...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAATGCCTGAAGCATCCGTaGCTGAAGCTGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWECLKHP*LKLFGG
Trigger: GCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCA...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGCAATTGGCCACTTTTTaGGCCGGGGAACAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWQLATF*AGEQVP
Trigger: GGGAACCTGTTCCCCGGCCCAAAAAGTGGCCAATTG...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTGTTTCCTGTAGTGTGTaGATCTCTGCAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGVSCSV*ISASRA
Trigger: GGCTCTGCTTGCAGAGATCCACACACTACAGGAAAC...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTGAGCGAGGTCATCTaGAGTGATTCCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLVSEVI*SDSSFR
Trigger: CCTGAAGGAGGAATCACTTCAGATGACCTCGCTCAC...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGTGAGCGAGGTCATCTaGAGTGATTCCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKVSEVI*SDSSFR
Trigger: CCTGAAGGAGGAATCACTTCAGATGACCTCGCTCAC...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGTGTCCTTCAGGATTGTaGCTTAGAGGGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKCPSGL*LRGGSP
Trigger: AGGTGAACCCCCTCTAAGTCACAATCCTGAAGGACA...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGCTGGGGCTTCCACCTTaGTTGCTGTTGCAGAACCAT +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKLGLPP*LLLQNH
Trigger: ATGGTTCTGCAACAGCAATCAAGGTGGAAGCCCCAG...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTCCAGTCTCAGGAAGATaGAGTGCATCTCAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGPVSGR*SASQKH
Trigger: ATGCTTCTGAGATGCACTTCATCTTCCTGAGACTGG...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGTCTCTTCCAGATAGATaGGCCCCAGTCTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKSLPDR*APVSGR
Trigger: TCTTCCTGAGACTGGGGCTCATCTATCTGGAAGAGA...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGTCTGTCACGGTGATCTaGACGAGTCTGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWSVTVI*TSLPAD
Trigger: ATCAGCAGGCAGACTCGTGCAGATCACCGTGACAGA...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTCTAAGGGTGAGCCTTaGACAGGGTGCAATGGAACT +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWSKGEP*TGCNGT
Trigger: AGTTCCATTGCACCCTGTGCAAGGCTCACCCTTAGA...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGTTTATACTAGGTGCCTaGACATCCCCAGGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLFILGA*TSPGLG
Trigger: GCCTAGGCCTGGGGATGTGCAGGCACCTAGTATAAA...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAATGCCTGAAGCATCCGTaGCTGAAGCTGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMECLKHP*LKLFGG
Trigger: GCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCA...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTATGCAGCTCCTGGTCCTaGTGGGGCTTCCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVCSSWS*WGFHLD
Trigger: ATCAAGGTGGAAGCCCCAGCAGGACCAGGAGCTGCA...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGTGCTCAGCTTCTAATTaGCGTCCAACTTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGCSASN*RPTFRQ
Trigger: CTGCCTGAAAGTTGGACGGCAATTAGAAGCTGAGCA...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTTGCTCAGCTTCTAATTaGCGTCCAACTTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGCSASN*RPTFRQ
Trigger: CTGCCTGAAAGTTGGACGGCAATTAGAAGCTGAGCA...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTCTCGCGATAACCCTCTaGGGCCGGGAGCAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSLAITL*GREQGA
Trigger: CGCTCCCTGCTCCCGGCCCCAGAGGGTTATCGCGAG...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAACTGCCCAGGACCTGTTaGAATGAAGGATTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWELPRTC*NEGFRH
Trigger: GTGCCTGAATCCTTCATTCCAACAGGTCCTGGGCAG...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGGTAAGAGGAGGCCTTaGAGGAATCATTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGGKRRP*RNHFLD
Trigger: GTCAAGGAAATGATTCCTCCAAGGCCTCCTCTTACC...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTAGCTCCTGGTCCTGCTaGGGCTTCCACCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLSSWSC*GFHLDC
Trigger: GCAATCAAGGTGGAAGCCCCAGCAGGACCAGGAGCT...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGTCAGGCCCCAGACATTaGGGTTCAGGTAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKSGPRH*GSGSPS
Trigger: AGATGGACTACCTGAACCCCAATGTCTGGGGCCTGA...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGTCAGGCCCCAGACATTaGGGTTCAGGTAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLSGPRH*GSGSPS
Trigger: AGATGGACTACCTGAACCCCAATGTCTGGGGCCTGA...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGAGGTCCACCACAGCCTaGCCAAGAATTAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLRSTTA*PRIKVF
Trigger: GAAGACCTTAATTCTTGGTCAGGCTGTGGTGGACCT...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGAAGCAGCCTCCAACGTaGCCTTCAGTAGATTGCCCC +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMKQPPT*PSVDCP
Trigger: GGGGCAATCTACTGAAGGTCACGTTGGAGGCTGCTT...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAAGTCCTTCTCTCCAAGTaGTGGAACTTGCAGACCGAC +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMEVLLSK*WNLQTD
Trigger: GTCGGTCTGCAAGTTCCATCACTTGGAGAGAAGGAC...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTTGTCCTCAGGATGGTTaGGTTCTCCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGCPQDG*VLLLLL
Trigger: AAGAAGAAGAAGGAGAACTCAACCATCCTGAGGACA...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTCGGCAATTCGCTTCTaGAAACTGACCACTGCAGAA +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWSAIRF*KLTTAE
Trigger: TTCTGCAGTGGTCAGTTTTCAGAAGCGAATTGCCGA...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGAACAAGCTGTGGATATaGCTCTGGTTGAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKNKLWI*LWLRER
Trigger: CCTTTCCCTCAACCAGAGTCATATCCACAGCTTGTT...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGTCTAAGGGTGAGCCTTaGACAGGGTGCAATGGAACT +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWSKGEP*TGCNGT
Trigger: AGTTCCATTGCACCCTGTGCAAGGCTCACCCTTAGA...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTCTGAAAACTGACCACTaGAGAAGGATCAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGLKTDH*RRIKVA
Trigger: TGCTACCTTGATCCTTCTGCAGTGGTCAGTTTTCAG...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGAGATTTTATACTAGGTaGCTGCACATCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKRFYTR*LHIPRP
Trigger: AGGCCTGGGGATGTGCAGGCACCTAGTATAAAATCT...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGTGGTAGTCACTCATTaGCTTCTGAGCTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWVVVTH*LLSSSC
Trigger: ACAGGAGGAGCTCAGAAGGCAATGAGTGACTACCAC...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310715.7
CDS-3UTR GCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAACTGAGCTGGCACTTCTaGTCCTCCAAGGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWELSWHF*SSKVSL
Trigger: TAGTGAAACCTTGGAGGAGCAGAAGTGCCAGCTCAG...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTTGCAGCTCCTGGTCCTaGTGGGGCTTCCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTCSSWS*WGFHLD
Trigger: ATCAAGGTGGAAGCCCCAGCAGGACCAGGAGCTGCA...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGTGTGCAAGCACTCTGTaGACATACTGCACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKCASTL*TYCTAL
Trigger: CAAGGCTGTGCAGTATGTGCACAGAGTGCTTGCACA...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAACAGAATGTTGGCAATTaGCCACTTTTTGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMEQNVGN*PLFGPG
Trigger: CCCCGGCCCAAAAAGTGGCCAATTGCCAACATTCTG...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGCTGGAGCCAGAATGTTaGCAATTGGCCACTTTTTGG +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWLEPEC*QLATFW
Trigger: CCAAAAAGTGGCCAATTGCCAACATTCTGGCTCCAG...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTCGCTGTCCTCAGGATaGTTGAGTTCTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWSLSSG*LSSPSS
Trigger: AGAAGAAGGAGAACTCAACCATCCTGAGGACAGCGA...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGGGTAAGAGGAGGCCTTaGAGGAATCATTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWGKRRP*RNHFLD
Trigger: GTCAAGGAAATGATTCCTCCAAGGCCTCCTCTTACC...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGGGACATCATCTGGCATaGTCTGGTTTAGGGCTACAT +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKGHHLA*SGLGLH
Trigger: ATGTAGCCCTAAACCAGACCATGCCAGATGATGTCC...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGTTGCAACAGTGCCTTaGACATCATCTGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKVATVP*TSSGMV
Trigger: GACCATGCCAGATGATGTCCAAGGCACTGTTGCAAC...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGTGCCTGAAGCTGTTTaGAGGCCTCATGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWVPEAV*RPHEMP
Trigger: TGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCAC...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGTAATATTCACAGCTaGGGCCTCCTTGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWSNIHS*GLLEGI
Trigger: TATGCCCTCAAGGAGGCCCCAGCTGTGAATATTACT...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGTTTCCTGTAGTGTGTaGATCTCTGCAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWEVSCSV*ISASRA
Trigger: GGCTCTGCTTGCAGAGATCCACACACTACAGGAAAC...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGTTTCCTGTAGTGTGTaGATCTCTGCAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKVSCSV*ISASRA
Trigger: GGCTCTGCTTGCAGAGATCCACACACTACAGGAAAC...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCCACGAGTCTGCCTGCTaGTGGCACTTGCTCCATATC +
Preference number: 4 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLHESAC*WHLLHI
Trigger: GATATGGAGCAAGTGCCATCAGCAGGCAGACTCGTG...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGAAGAACACAGGTTTGTaGGCGAGGTCATCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKKNTGL*ARSSEV
Trigger: CACTTCAGATGACCTCGCTCACAAACCTGTGTTCTT...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAATCGGCAATTCGCTTCTaGAAACTGACCACTGCAGAA +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWESAIRF*KLTTAE
Trigger: TTCTGCAGTGGTCAGTTTTCAGAAGCGAATTGCCGA...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTTCACTGATAAATGTCTaGAGTTCCTCCTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGSLINV*SSSWLS
Trigger: TGAAAGCCAGGAGGAACTTCAGACATTTATCAGTGA...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTACTGGGGCTTCCACCTTaGTTGCTGTTGCAGAACCAT +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVLGLPP*LLLQNH
Trigger: ATGGTTCTGCAACAGCAATCAAGGTGGAAGCCCCAG...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGCAAAATGGGTTCTTGTaGATCAGACTGCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGQNGFL*IRLQFG
Trigger: TCCAAACTGCAGTCTGATTCACAAGAACCCATTTTG...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGCCAGTCTCAGGAAGATaGAGTGCATCTCAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWPVSGR*SASQKH
Trigger: ATGCTTCTGAGATGCACTTCATCTTCCTGAGACTGG...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAATCTCTTCCAGATAGATaGGCCCCAGTCTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMESLPDR*APVSGR
Trigger: TCTTCCTGAGACTGGGGCTCATCTATCTGGAAGAGA...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCCTGCTGATGGCACTTaGTCCATATCACCAACTGGG +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLPADGT*SISPTG
Trigger: CCCAGTTGGTGATATGGAGCAAGTGCCATCAGCAGG...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAAGATTTTATACTAGGTaGCTGCACATCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWERFYTR*LHIPRP
Trigger: AGGCCTGGGGATGTGCAGGCACCTAGTATAAAATCT...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTCACAATGTATGTCCCTaGTTCTACATATTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGHNVCP*FYILLS
Trigger: GGACAGCAATATGTAGAAGCAGGGACATACATTGTG...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGTTGCTTTGTTACTTGTaGCTGAAGCATCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLLLCYL*LKHPCL
Trigger: CAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAA...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGTTGCTTTGTTACTTGTaGCTGAAGCATCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKLLCYL*LKHPCL
Trigger: CAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAA...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGGGCTTCCACCTTGATTaGTGTTGCAGAACCATTTGT +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKGFHLD*CCRTIC
Trigger: ACAAATGGTTCTGCAACAGCAATCAAGGTGGAAGCC...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGACTCTGTGCACATACTaGACAGCCTTGACTTTCATC +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKTLCTY*TALTFI
Trigger: GATGAAAGTCAAGGCTGTGCAGTATGTGCACAGAGT...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGTAGTCCATCTGGGCTaGTTGTTGAAGGTATTCCTC +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWVVHLG*LLKVFL
Trigger: GAGGAATACCTTCAACAAGCAGCCCAGATGGACTAC...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGGGTTCGTTCATAGCATaGCTTGGCCTCAGAATGATT +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWGSFIA*LGLRMI
Trigger: AATCATTCTGAGGCCAAGGCATGCTATGAACGAACC...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAATGCTCAGCTTCTAATTaGCGTCCAACTTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWECSASN*RPTFRQ
Trigger: CTGCCTGAAAGTTGGACGGCAATTAGAAGCTGAGCA...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGTTTCTTTGGTCTTTTTaGCCATCGCACGAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGFLWSF*PSHEQV
Trigger: AACTTGCTCGTGCGATGGCCAAAAAGACCAAAGAAA...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTCCCTCTGTTTTCTTTaGTCTTTTTGGCCATCGCAC +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWSLCFL*SFWPSH
Trigger: GTGCGATGGCCAAAAAGACCAAAGAAAACAGAGGGA...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGCTGAGATCTGGGCTGTaGTCAGTAAAGGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMLRSGL*SVKALP
Trigger: TGGCAGAGCCTTTACTGACCACAGCCCAGATCTCAG...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCCAATTGGCCACTTTTTaGGCCGGGGAACAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLQLATF*AGEQVP
Trigger: GGGAACCTGTTCCCCGGCCCAAAAAGTGGCCAATTG...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGCAGAATGTTGGCAATTaGCCACTTTTTGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMQNVGN*PLFGPG
Trigger: CCCCGGCCCAAAAAGTGGCCAATTGCCAACATTCTG...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGGACATCATCTGGCATaGTCTGGTTTAGGGCTACAT +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWGHHLA*SGLGLH
Trigger: ATGTAGCCCTAAACCAGACCATGCCAGATGATGTCC...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGAGTAATATTCACAGCTaGGGCCTCCTTGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLSNIHS*GLLEGI
Trigger: TATGCCCTCAAGGAGGCCCCAGCTGTGAATATTACT...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGAGTAATATTCACAGCTaGGGCCTCCTTGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKSNIHS*GLLEGI
Trigger: TATGCCCTCAAGGAGGCCCCAGCTGTGAATATTACT...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTATCAGGCCCCAGACATTaGGGTTCAGGTAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVSGPRH*GSGSPS
Trigger: AGATGGACTACCTGAACCCCAATGTCTGGGGCCTGA...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAGGTCCACCACAGCCTaGCCAAGAATTAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVRSTTA*PRIKVF
Trigger: GAAGACCTTAATTCTTGGTCAGGCTGTGGTGGACCT...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTACAGGACCTGTTGGAATaGAGGATTCAGGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVQDLLE*RIQAQS
Trigger: ACTCTGTGCCTGAATCCTTCATTCCAACAGGTCCTG...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCAGGACCTGTTGGAATaGAGGATTCAGGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLQDLLE*RIQAQS
Trigger: ACTCTGTGCCTGAATCCTTCATTCCAACAGGTCCTG...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGTGTCCTCAGGATGGTTaGGTTCTCCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWCPQDG*VLLLLL
Trigger: AAGAAGAAGAAGGAGAACTCAACCATCCTGAGGACA...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGGAGTATCTGAGCTCTaGGATTTTATACTAGGTGCC +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKGVSEL*DFILGA
Trigger: GGCACCTAGTATAAAATCTCAGAGCTCAGATACTCC...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAGGAATCATTTCCTTaGCCCTTCTGGCTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMEESFP*PFWLAP
Trigger: AGGAGCTAGCCAGAAGGGTCAAGGAAATGATTCCTC...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAGAGGAATCATTTCCTTaGCCCTTCTGGCTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVEESFP*PFWLAP
Trigger: AGGAGCTAGCCAGAAGGGTCAAGGAAATGATTCCTC...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTCACTGATAAATGTCTaGAGTTCCTCCTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWSLINV*SSSWLS
Trigger: TGAAAGCCAGGAGGAACTTCAGACATTTATCAGTGA...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTCATCCTCAGCCTCTGTaGGCTCCTCCAGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSHPQPL*APPADS
Trigger: GCTATCGGCTGGAGGAGCTCACAGAGGCTGAGGATG...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGAAATGGTTGCAACAGTaGCTTGGACATCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWKWLQQ*LGHHLA
Trigger: TGCCAGATGATGTCCAAGGCACTGTTGCAACCATTT...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGTCTTGTGAATCAGACTaGAGTTTGGAGGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGSCESD*SLEDSS
Trigger: TGAAGAATCCTCCAAACTGCAGTCTGATTCACAAGA...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGTGTGCAAGCACTCTGTaGACATACTGCACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMCASTL*TYCTAL
Trigger: CAAGGCTGTGCAGTATGTGCACAGAGTGCTTGCACA...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTTGTGCAAGCACTCTGTaGACATACTGCACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLCASTL*TYCTAL
Trigger: CAAGGCTGTGCAGTATGTGCACAGAGTGCTTGCACA...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGGTTCGTTCATAGCATaGCTTGGCCTCAGAATGATT +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKGSFIA*LGLRMI
Trigger: AATCATTCTGAGGCCAAGGCATGCTATGAACGAACC...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGTTCGTTCATAGCATaGCTTGGCCTCAGAATGATT +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWEGSFIA*LGLRMI
Trigger: AATCATTCTGAGGCCAAGGCATGCTATGAACGAACC...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAACTCAGAGTCCCATaGAGAAAATTGTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKELRVP*RKLFSW
Trigger: CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTC...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGAATGTTATTAGCTCCTaGAGCCAGAATGTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGNVISS*SQNVGN
Trigger: ATTGCCAACATTCTGGCTCCAGGAGCTAATAACATT...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGCTCTGGCATTCGCTTTaGAACCAAGGCTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMLWHSL*NQGFVQ
Trigger: CTGGACAAAGCCTTGGTTCCAAAGCGAATGCCAGAG...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTCTCTGGCATTCGCTTTaGAACCAAGGCTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSLWHSL*NQGFVQ
Trigger: CTGGACAAAGCCTTGGTTCCAAAGCGAATGCCAGAG...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAATCATCTGGCATGGTCTaGTTTAGGGCTACATGCATC +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMESSGMV*FRATCI
Trigger: GATGCATGTAGCCCTAAACCAGACCATGCCAGATGA...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGTTGCAACAGTGCCTTaGACATCATCTGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSVATVP*TSSGMV
Trigger: GACCATGCCAGATGATGTCCAAGGCACTGTTGCAAC...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGTGCCTGAAGCTGTTTaGAGGCCTCATGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSVPEAV*RPHEMP
Trigger: TGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCAC...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTGTGCCTGAAGCTGTTTaGAGGCCTCATGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLVPEAV*RPHEMP
Trigger: TGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCAC...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGTTTCCTGTAGTGTGTaGATCTCTGCAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSVSCSV*ISASRA
Trigger: GGCTCTGCTTGCAGAGATCCACACACTACAGGAAAC...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGTCCCTCTGTTTTCTTTaGTCTCTGCAGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMSLCFL*SLQQPQ
Trigger: CTGAGGCTGCTGCAGAGACCAAAGAAAACAGAGGGA...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340329.7
CDS-3UTR TCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGTCTCCCAGAACCACTTaGTTGAATTCTGCTCGAATA +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKSPRTT*LNSARI
Trigger: TATTCGAGCAGAATTCAATCAAGTGGTTCTGGGAGA...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGAAGAACACAGGTTTGTaGGCGAGGTCATCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMKNTGL*ARSSEV
Trigger: CACTTCAGATGACCTCGCTCACAAACCTGTGTTCTT...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAATGGAACTGTTGTTTaGAATGAACTCTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWNGTVV*NELCPS
Trigger: GGAAGGACAGAGTTCATTTCAAACAACAGTTCCATT...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGAGGGACCACCAACAATaGATGCATCAGGAATGTTAT +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWRDHQQ*MHQECY
Trigger: ATAACATTCCTGATGCATTCATTGTTGGTGGTCCCT...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTTGTCCTTCAGGATTGTaGCTTAGAGGGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTCPSGL*LRGGSP
Trigger: AGGTGAACCCCCTCTAAGTCACAATCCTGAAGGACA...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTTCACTCATTGCCTTCTaGGCTCCTCCTGTCCGACGG +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSSLIAF*APPVRR
Trigger: CCGTCGGACAGGAGGAGCTCAGAAGGCAATGAGTGA...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310715.7
CDS-3UTR TCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTCTCCTGGCTTTCAAATaGTGTTGTCTTCAAGTATTT +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGLLAFK*CCLQVF
Trigger: AAATACTTGAAGACAACATCATTTGAAAGCCAGGAG...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGGATATGACTCTGGTTaGGGGAAAGGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMGYDSG*GKGLSE
Trigger: TTCAGAAAGCCCTTTCCCTCAACCAGAGTCATATCC...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAACAAGCTGTGGATATaGCTCTGGTTGAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVNKLWI*LWLRER
Trigger: CCTTTCCCTCAACCAGAGTCATATCCACAGCTTGTT...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTAACAAGCTGTGGATATaGCTCTGGTTGAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSNKLWI*LWLRER
Trigger: CCTTTCCCTCAACCAGAGTCATATCCACAGCTTGTT...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTATTGCAGAACCATTTGTaGTTCCCCAAGGGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVLQNHL*FPKGLN
Trigger: GTTTAGGCCCTTGGGGAATCACAAATGGTTCTGCAA...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGAGAAACAGTAATTTTTaGAGAGTCTCCCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKRNSNF*RVSQNH
Trigger: GTGGTTCTGGGAGACTCTGCAAAAATTACTGTTTCT...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGAGTGAAGTTGTATTTTaGACTTCCTTCTGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGSEVVF*TSFWRN
Trigger: GTTTCTCCAGAAGGAAGTGCAAAATACAACTTCACT...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGCAGTCTTTTCAGTTTTaGCAGCTTTCCCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKQSFQF*QLSLWV
Trigger: TACCCAAAGGGAAAGCTGGCAAAACTGAAAAGACTG...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAACACAATGTATGTCCCTaGTTCTACATATTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWEHNVCP*FYILLS
Trigger: GGACAGCAATATGTAGAAGCAGGGACATACATTGTG...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTGAGCTGGCACTTCTaGTCCTCCAAGGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTLSWHF*SSKVSL
Trigger: TAGTGAAACCTTGGAGGAGCAGAAGTGCCAGCTCAG...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGCTTGTATAAATGGTTaGAACAGTGCCTTGGACATC +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLACING*NSALDI
Trigger: GATGTCCAAGGCACTGTTGCAACCATTTATACAAGC...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGGACTTCTGCTTCAAATaGAAAGAGTTGAAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWDFCFK*KELKLF
Trigger: GAACAGCTTCAACTCTTTGCATTTGAAGCAGAAGTC...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGCTCTTTATAATATGCTaGTGCCATCTCAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGLFIIC*CHLKVL
Trigger: GAGAACTTTGAGATGGCAGCAGCATATTATAAAGAG...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGGAGGCCTCATGAAATaGCATTTCCATTCGAATATC +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWGGLMK*HFHSNI
Trigger: GATATTCGAATGGAAATGGCATTTCATGAGGCCTCC...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGTTGCTTTGTTACTTGTaGCTGAAGCATCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMLLCYL*LKHPCL
Trigger: CAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAA...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGCACCTTGATTGCTGTTaGAGAACCATTTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKHLDCC*RTICDS
Trigger: GGAATCACAAATGGTTCTGCAACAGCAATCAAGGTG...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTCTTGTGAATCAGACTaGAGTTTGGAGGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWSCESD*SLEDSS
Trigger: TGAAGAATCCTCCAAACTGCAGTCTGATTCACAAGA...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGTTTTCTTTGGTCTCTaGAGCAGCCTCAGTTATGTT +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWEVFFGL*SSLSYV
Trigger: AACATAACTGAGGCTGCTGCAGAGACCAAAGAAAAC...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340329.7
CDS-3UTR GCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTCAGCTCCTGGTCTTGTaGCTGAAGCATCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSQLLVL*LKHPCL
Trigger: CAGGCACGGATGCTTCAGGCACAAGACCAGGAGCTG...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394865.2
CDS-3UTR GCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCAAGCAACTCTGACCTaGACAGCCTTGACTTTCATC +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLQATLT*TALTFI
Trigger: GATGAAAGTCAAGGCTGTGCAGGTCAGAGTTGCTTG...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394865.2
CDS-3UTR CCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGCTCCATATCACCAACTaGGAAAAGTCCCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLLHITN*EKSLCF
Trigger: AAAACAGAGGGACTTTTCCCAGTTGGTGATATGGAG...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAATTCTCTTCACACCTaGATACAACAATGGGACCAT +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWNSLHT*IQQWDH
Trigger: ATGGTCCCATTGTTGTATCCAGGTGTGAAGAGAATT...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAATATCACTCTCCAGTTTaGCCACCTGTTTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWEYHSPV*PPVFQT
Trigger: TGTTTGGAAAACAGGTGGCCAAACTGGAGAGTGATA...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTATCATCTGGCATGGTCTaGTTTAGGGCTACATGCATC +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVSSGMV*FRATCI
Trigger: GATGCATGTAGCCCTAAACCAGACCATGCCAGATGA...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGGACATCATCTGGCATaGTCTGGTTTAGGGCTACAT +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMGHHLA*SGLGLH
Trigger: ATGTAGCCCTAAACCAGACCATGCCAGATGATGTCC...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCGTTGCAACAGTGCCTTaGACATCATCTGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLVATVP*TSSGMV
Trigger: GACCATGCCAGATGATGTCCAAGGCACTGTTGCAAC...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTAGCTCCTGGTCCTGCTaGGGCTTCCACCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSSSWSC*GFHLDC
Trigger: GCAATCAAGGTGGAAGCCCCAGCAGGACCAGGAGCT...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAAGTTCATAGCATGCCTTaGCCTCAGAATGATTTCCAC +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMEVHSMP*PQNDFH
Trigger: GTGGAAATCATTCTGAGGCCAAGGCATGCTATGAAC...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCGTTTCCTGTAGTGTGTaGATCTCTGCAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLVSCSV*ISASRA
Trigger: GGCTCTGCTTGCAGAGATCCACACACTACAGGAAAC...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGAGAAAATTGTTCAGCTaGAGGGGTATCAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKRKLFS*RGIRKM
Trigger: CATCTTTCTGATACCCCTCCAGCTGAACAATTTTCT...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGAATGGAACTGTTGTTTaGAATGAACTCTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWNGTVV*NELCPS
Trigger: GGAAGGACAGAGTTCATTTCAAACAACAGTTCCATT...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTAAGCAGCCTCCAACGTaGCCTTCAGTAGATTGCCCC +
Preference number: 4 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSKQPPT*PSVDCP
Trigger: GGGGCAATCTACTGAAGGTCACGTTGGAGGCTGCTT...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGTCAAATGCAAAGAGTTaGAGCTGTTCACTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWSNAKS*SCSLLV
Trigger: TACAAGCAGTGAACAGCTTCAACTCTTTGCATTTGA...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGTCAAATGCAAAGAGTTaGAGCTGTTCACTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLSNAKS*SCSLLV
Trigger: TACAAGCAGTGAACAGCTTCAACTCTTTGCATTTGA...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGTGTTTGGAGGCCTCATaGAATGCCATTTCCATTCGA +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMCLEAS*NAISIR
Trigger: TCGAATGGAAATGGCATTTCATGAGGCCTCCAAACA...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTTGTTTGGAGGCCTCATaGAATGCCATTTCCATTCGA +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSCLEAS*NAISIR
Trigger: TCGAATGGAAATGGCATTTCATGAGGCCTCCAAACA...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTTGTTTGGAGGCCTCATaGAATGCCATTTCCATTCGA +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLCLEAS*NAISIR
Trigger: TCGAATGGAAATGGCATTTCATGAGGCCTCCAAACA...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTTTGCAGAACCATTTGTaGTTCCCCAAGGGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTLQNHL*FPKGLN
Trigger: GTTTAGGCCCTTGGGGAATCACAAATGGTTCTGCAA...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGCATACTGCACAGCCTTaGCTTTCATCAAGAAATGTA +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWHTAQP*LSSRNV
Trigger: TACATTTCTTGATGAAAGTCAAGGCTGTGCAGTATG...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCCAGTCTCAGGAAGATaGAGTGCATCTCAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTPVSGR*SASQKH
Trigger: ATGCTTCTGAGATGCACTTCATCTTCCTGAGACTGG...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTGCCTTGGCCTCAGAATaGTTTCCATTCAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTALASE*FPFRVP
Trigger: TGGAACTCTGAATGGAAATCATTCTGAGGCCAAGGC...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340329.7
CDS-3UTR GCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGAAATGGTTGCAACAGTaGCTTGGACATCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMKWLQQ*LGHHLA
Trigger: TGCCAGATGATGTCCAAGGCACTGTTGCAACCATTT...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGACTTCTGCTTCAAATaGAAAGAGTTGAAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKDFCFK*KELKLF
Trigger: GAACAGCTTCAACTCTTTGCATTTGAAGCAGAAGTC...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGTCTCTCTTTATAATATaGTGCTGCCATCTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SGKERNSESHAENCSAGGSLFII*CCHLKV
Trigger: AACTTTGAGATGGCAGCAGCATATTATAAAGAGAGA...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGCTGAAAACACTCTTGTaGTTTGATGTTGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWLKTLL*FDVVFS
Trigger: ACTGAAGACAACATCAAAGCACAAGAGTGTTTTCAG...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGCTGAAAACACTCTTGTaGTTTGATGTTGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKLKTLL*FDVVFS
Trigger: ACTGAAGACAACATCAAAGCACAAGAGTGTTTTCAG...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTTGCCTGAAGCATCCGTaGCTGAAGCTGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSCLKHP*LKLFGG
Trigger: GCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCA...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTGTCTTCTACACCAGTaGTCTTTTGCTTTGTTACTT +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWCLLHQ*SFALLL
Trigger: AAGTAACAAAGCAAAAGAGCACTGGTGTAGAAGACA...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAACACCTTGATTGCTGTTaGAGAACCATTTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMEHLDCC*RTICDS
Trigger: GGAATCACAAATGGTTCTGCAACAGCAATCAAGGTG...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGACTCTGTGCACATACTaGACAGCCTTGACTTTCATC +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMTLCTY*TALTFI
Trigger: GATGAAAGTCAAGGCTGTGCAGTATGTGCACAGAGT...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGTTGAAGGTATTCCTCTaGCTTGGCAAAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWLKVFL*LGKVLL
Trigger: AAGAAGAACTTTGCCAAGGCAGAGGAATACCTTCAA...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAATTGAAGGTATTCCTCTaGCTTGGCAAAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWELKVFL*LGKVLL
Trigger: AAGAAGAACTTTGCCAAGGCAGAGGAATACCTTCAA...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTGTAGTCCATCTGGGCTaGTTGTTGAAGGTATTCCTC +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTVVHLG*LLKVFL
Trigger: GAGGAATACCTTCAACAAGCAGCCCAGATGGACTAC...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGGTTCGTTCATAGCATaGCTTGGCCTCAGAATGATT +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMGSFIA*LGLRMI
Trigger: AATCATTCTGAGGCCAAGGCATGCTATGAACGAACC...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAGGTTCGTTCATAGCATaGCTTGGCCTCAGAATGATT +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVGSFIA*LGLRMI
Trigger: AATCATTCTGAGGCCAAGGCATGCTATGAACGAACC...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTTGCTCAGCTTCTAATTaGCGTCCAACTTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTCSASN*RPTFRQ
Trigger: CTGCCTGAAAGTTGGACGGCAATTAGAAGCTGAGCA...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAACTCAGAGTCCCATaGAGAAAATTGTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMELRVP*RKLFSW
Trigger: CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTC...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTTCGAATAAAGGTAACTaGAGTATCTCCTTTAAAACC +
Preference number: 4 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGSNKGN*SISFKT
Trigger: GGTTTTAAAGGAGATACTCCAGTTACCTTTATTCGA...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTTCGCTGTCCTCAGGATaGTTGAGTTCTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTSLSSG*LSSPSS
Trigger: AGAAGAAGGAGAACTCAACCATCCTGAGGACAGCGA...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCATCTGGCATGGTCTaGTTTAGGGCTACATGCATC +
Preference number: 4 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLSSGMV*FRATCI
Trigger: GATGCATGTAGCCCTAAACCAGACCATGCCAGATGA...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAAGGCTACAACATTAGTTaGTTCCAAGCAAGTAGCATC +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMEGYNIS*FQASSI
Trigger: GATGCTACTTGCTTGGAACCAACTAATGTTGTAGCC...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGGTGTTAGATGGTTTTTaGCTTATACTTGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWVLDGF*LILGSQ
Trigger: TTGGGATCCAAGTATAAGCCAAAAACCATCTAACAC...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTAGTAATATTCACAGCTaGGGCCTCCTTGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTSNIHS*GLLEGI
Trigger: TATGCCCTCAAGGAGGCCCCAGCTGTGAATATTACT...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGTTCATAGCATGCCTTaGCCTCAGAATGATTTCCAC +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMVHSMP*PQNDFH
Trigger: GTGGAAATCATTCTGAGGCCAAGGCATGCTATGAAC...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTGTTCATAGCATGCCTTaGCCTCAGAATGATTTCCAC +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLVHSMP*PQNDFH
Trigger: GTGGAAATCATTCTGAGGCCAAGGCATGCTATGAAC...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGAGAAAATTGTTCAGCTaGAGGGGTATCAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWRKLFS*RGIRKM
Trigger: CATCTTTCTGATACCCCTCCAGCTGAACAATTTTCT...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAAGAAAATTGTTCAGCTaGAGGGGTATCAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWERKLFS*RGIRKM
Trigger: CATCTTTCTGATACCCCTCCAGCTGAACAATTTTCT...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTCCTTCTCTCCAAGTaGTGGAACTTGCAGACCGAC +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFVLLSK*WNLQTD
Trigger: GTCGGTCTGCAAGTTCCATCACTTGGAGAGAAGGAC...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTTCGCTTCTGAAAACTaGCCACTGCAGAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLFASEN*PLQKDQ
Trigger: TTGATCCTTCTGCAGTGGTCAGTTTTCAGAAGCGAA...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTCCAGAGGAACTCTTGTaGTCTCTACAGGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSPEELL*SLQAKA
Trigger: GGCTTTGGCCTGTAGAGATCACAAGAGTTCCTCTGG...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGTTCCAAAGGAGTATCTaGGCTCTGAGATTTTATACT +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKFQRSI*ALRFYT
Trigger: AGTATAAAATCTCAGAGCTCAGATACTCCTTTGGAA...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTGGGGCTTCCACCTTaGTTGCTGTTGCAGAACCAT +
Preference number: 4 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVLGLPP*LLLQNH
Trigger: ATGGTTCTGCAACAGCAATCAAGGTGGAAGCCCCAG...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAAGAGCTGATGAATCTTaGCATTTTGATGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWERADES*HFDASF
Trigger: GAAAGAAGCATCAAAATGTCAAGATTCATCAGCTCT...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGCACTTGATTGAATTCTaGTCGAATAAAGGTAACTGG +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLHLIEF*SNKGNW
Trigger: CCAGTTACCTTTATTCGAGCAGAATTCAATCAAGTG...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGCACTTGATTGAATTCTaGTCGAATAAAGGTAACTGG +
Preference number: 4 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWHLIEF*SNKGNW
Trigger: CCAGTTACCTTTATTCGAGCAGAATTCAATCAAGTG...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTTTTATACTAGGTGCCTaGACATCCCCAGGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVFILGA*TSPGLG
Trigger: GCCTAGGCCTGGGGATGTGCAGGCACCTAGTATAAA...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTGCTTGTATAAATGGTTaGAACAGTGCCTTGGACATC +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLACING*NSALDI
Trigger: GATGTCCAAGGCACTGTTGCAACCATTTATACAAGC...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTTGAAGCTGTTCACTaGTTGTATAAATGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLVEAVH*LYKWLQ
Trigger: TTGCAACCATTTATACAAGCAGTGAACAGCTTCAAC...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGAGGCCTCATGAAATaGCATTTCCATTCGAATATC +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSGGLMK*HFHSNI
Trigger: GATATTCGAATGGAAATGGCATTTCATGAGGCCTCC...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTTTTCTTTGGTCTTTTTaGCCATCGCACGAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSFLWSF*PSHEQV
Trigger: AACTTGCTCGTGCGATGGCCAAAAAGACCAAAGAAA...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTCTCCATATCACCAACTaGGAAAAGTCCCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSLHITN*EKSLCF
Trigger: AAAACAGAGGGACTTTTCCCAGTTGGTGATATGGAG...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTGAGATCTGGGCTGTaGTCAGTAAAGGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVLRSGL*SVKALP
Trigger: TGGCAGAGCCTTTACTGACCACAGCCCAGATCTCAG...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTGCCCAGGACCTGTTaGAATGAAGGATTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVLPRTC*NEGFRH
Trigger: GTGCCTGAATCCTTCATTCCAACAGGTCCTGGGCAG...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTCTGCCCAGGACCTGTTaGAATGAAGGATTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSLPRTC*NEGFRH
Trigger: GTGCCTGAATCCTTCATTCCAACAGGTCCTGGGCAG...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAAAATTCTCTTCACACCTaGATACAACAATGGGACCAT +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMENSLHT*IQQWDH
Trigger: ATGGTCCCATTGTTGTATCCAGGTGTGAAGAGAATT...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGCTACAACATTAGTTaGTTCCAAGCAAGTAGCATC +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSGYNIS*FQASSI
Trigger: GATGCTACTTGCTTGGAACCAACTAATGTTGTAGCC...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAGGCTACAACATTAGTTaGTTCCAAGCAAGTAGCATC +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVGYNIS*FQASSI
Trigger: GATGCTACTTGCTTGGAACCAACTAATGTTGTAGCC...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTTCAGGCCCCAGACATTaGGGTTCAGGTAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSSGPRH*GSGSPS
Trigger: AGATGGACTACCTGAACCCCAATGTCTGGGGCCTGA...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAAAGAAAATTGTTCAGCTaGAGGGGTATCAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMERKLFS*RGIRKM
Trigger: CATCTTTCTGATACCCCTCCAGCTGAACAATTTTCT...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTAAGGCTTTGTCCAGCTaGATTTCCAACACAATGTAT +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLKALSS*ISNTMY
Trigger: ATACATTGTGTTGGAAATTCAGCTGGACAAAGCCTT...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAACTCCTGGCTTTCAAATaGTGTTGTCTTCAAGTATTT +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMELLAFK*CCLQVF
Trigger: AAATACTTGAAGACAACATCATTTGAAAGCCAGGAG...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTTCAAATGCAAAGAGTTaGAGCTGTTCACTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLSNAKS*SCSLLV
Trigger: TACAAGCAGTGAACAGCTTCAACTCTTTGCATTTGA...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCCAAAATGGGTTCTTGTaGATCAGACTGCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLQNGFL*IRLQFG
Trigger: TCCAAACTGCAGTCTGATTCACAAGAACCCATTTTG...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTTCTCTTCCAGATAGATaGGCCCCAGTCTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVSLPDR*APVSGR
Trigger: TCTTCCTGAGACTGGGGCTCATCTATCTGGAAGAGA...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGAGAAACAGTAATTTTTaGAGAGTCTCCCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMRNSNF*RVSQNH
Trigger: GTGGTTCTGGGAGACTCTGCAAAAATTACTGTTTCT...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTTCTAAGGGTGAGCCTTaGACAGGGTGCAATGGAACT +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSSKGEP*TGCNGT
Trigger: AGTTCCATTGCACCCTGTGCAAGGCTCACCCTTAGA...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGACTTCTGCTTCAAATaGAAAGAGTTGAAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSDFCFK*KELKLF
Trigger: GAACAGCTTCAACTCTTTGCATTTGAAGCAGAAGTC...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTATTGAAGGTATTCCTCTaGCTTGGCAAAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVLKVFL*LGKVLL
Trigger: AAGAAGAACTTTGCCAAGGCAGAGGAATACCTTCAA...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGTCGAATAAAGGTAACTaGAGTATCTCCTTTAAAACC +
Preference number: 4 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKSNKGN*SISFKT
Trigger: GGTTTTAAAGGAGATACTCCAGTTACCTTTATTCGA...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAAGCTCAATAAACATTTaGTCTTTTCATGGACTACAC +
Preference number: 4 (lower is better)
Translates to: EDSFVLQLQASYGKTLWESSINI*SFHGLH
Trigger: GTGTAGTCCATGAAAAGACCAAATGTTTATTGAGCT...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTGGCTACAACATTAGTTaGTTCCAAGCAAGTAGCATC +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTGYNIS*FQASSI
Trigger: GATGCTACTTGCTTGGAACCAACTAATGTTGTAGCC...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTGCCTGAAGCTGTTTaGAGGCCTCATGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFVPEAV*RPHEMP
Trigger: TGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCAC...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAAGTGTTAGATGGTTTTTaGCTTATACTTGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMEVLDGF*LILGSQ
Trigger: TTGGGATCCAAGTATAAGCCAAAAACCATCTAACAC...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTAGAAAATTGTTCAGCTaGAGGGGTATCAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSRKLFS*RGIRKM
Trigger: CATCTTTCTGATACCCCTCCAGCTGAACAATTTTCT...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCAAGAACACAGGTTTGTaGGCGAGGTCATCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFKNTGL*ARSSEV
Trigger: CACTTCAGATGACCTCGCTCACAAACCTGTGTTCTT...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGGATATGACTCTGGTTaGGGGAAAGGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFGYDSG*GKGLSE
Trigger: TTCAGAAAGCCCTTTCCCTCAACCAGAGTCATATCC...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATGGATATGACTCTGGTTaGGGGAAAGGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYGYDSG*GKGLSE
Trigger: TTCAGAAAGCCCTTTCCCTCAACCAGAGTCATATCC...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCTTGCAGAACCATTTGTaGTTCCCCAAGGGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFLQNHL*FPKGLN
Trigger: GTTTAGGCCCTTGGGGAATCACAAATGGTTCTGCAA...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAGAGCTGATGAATCTTaGCATTTTGATGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVRADES*HFDASF
Trigger: GAAAGAAGCATCAAAATGTCAAGATTCATCAGCTCT...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCATACTGCACAGCCTTaGCTTTCATCAAGAAATGTA +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTHTAQP*LSSRNV
Trigger: TACATTTCTTGATGAAAGTCAAGGCTGTGCAGTATG...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR TCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTCCAGTCTCAGGAAGATaGAGTGCATCTCAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSPVSGR*SASQKH
Trigger: ATGCTTCTGAGATGCACTTCATCTTCCTGAGACTGG...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTCCAGTCTCAGGAAGATaGAGTGCATCTCAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSPVSGR*SASQKH
Trigger: ATGCTTCTGAGATGCACTTCATCTTCCTGAGACTGG...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTAGAAACAGTAATTTTTaGAGAGTCTCCCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTRNSNF*RVSQNH
Trigger: GTGGTTCTGGGAGACTCTGCAAAAATTACTGTTTCT...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTAGTGAAGTTGTATTTTaGACTTCCTTCTGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSSEVVF*TSFWRN
Trigger: GTTTCTCCAGAAGGAAGTGCAAAATACAACTTCACT...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAGTGAAGTTGTATTTTaGACTTCCTTCTGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVSEVVF*TSFWRN
Trigger: GTTTCTCCAGAAGGAAGTGCAAAATACAACTTCACT...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR GCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTACCACCAACAATGAATaGATCAGGAATGTTATTAGC +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSTTNNE*IRNVIS
Trigger: GCTAATAACATTCCTGATGCATTCATTGTTGGTGGT...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAATCTCTCTTTATAATATaGTGCTGCCATCTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMESLFII*CCHLKV
Trigger: AACTTTGAGATGGCAGCAGCATATTATAAAGAGAGA...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTTGTCTTCTACACCAGTaGTCTTTTGCTTTGTTACTT +
Preference number: 4 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLCLLHQ*SFALLL
Trigger: AAGTAACAAAGCAAAAGAGCACTGGTGTAGAAGACA...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTTCTTGTGAATCAGACTaGAGTTTGGAGGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTSCESD*SLEDSS
Trigger: TGAAGAATCCTCCAAACTGCAGTCTGATTCACAAGA...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGTAGTCCATCTGGGCTaGTTGTTGAAGGTATTCCTC +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSVVHLG*LLKVFL
Trigger: GAGGAATACCTTCAACAAGCAGCCCAGATGGACTAC...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATGTAGTCCATCTGGGCTaGTTGTTGAAGGTATTCCTC +
Preference number: 4 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYVVHLG*LLKVFL
Trigger: GAGGAATACCTTCAACAAGCAGCCCAGATGGACTAC...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTGCTCAGCTTCTAATTaGCGTCCAACTTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSCSASN*RPTFRQ
Trigger: CTGCCTGAAAGTTGGACGGCAATTAGAAGCTGAGCA...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCCTGGAGCCAGAATGTTaGCAATTGGCCACTTTTTGG +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFLEPEC*QLATFW
Trigger: CCAAAAAGTGGCCAATTGCCAACATTCTGGCTCCAG...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAGTGTTAGATGGTTTTTaGCTTATACTTGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVVLDGF*LILGSQ
Trigger: TTGGGATCCAAGTATAAGCCAAAAACCATCTAACAC...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATGGAGTATCTGAGCTCTaGGATTTTATACTAGGTGCC +
Preference number: 4 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYGVSEL*DFILGA
Trigger: GGCACCTAGTATAAAATCTCAGAGCTCAGATACTCC...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTTGTTTGGAGGCCTCATaGAATGCCATTTCCATTCGA +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSCLEAS*NAISIR
Trigger: TCGAATGGAAATGGCATTTCATGAGGCCTCCAAACA...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTAGAGCTGATGAATCTTaGCATTTTGATGCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTRADES*HFDASF
Trigger: GAAAGAAGCATCAAAATGTCAAGATTCATCAGCTCT...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTCTGAAAACTGACCACTaGAGAAGGATCAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSLKTDH*RRIKVA
Trigger: TGCTACCTTGATCCTTCTGCAGTGGTCAGTTTTCAG...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTAAATGGTTGCAACAGTaGCTTGGACATCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVKWLQQ*LGHHLA
Trigger: TGCCAGATGATGTCCAAGGCACTGTTGCAACCATTT...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTTGTCTTCTACACCAGTaGTCTTTTGCTTTGTTACTT +
Preference number: 4 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTCLLHQ*SFALLL
Trigger: AAGTAACAAAGCAAAAGAGCACTGGTGTAGAAGACA...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTGGCTTCCACCTTGATTaGTGTTGCAGAACCATTTGT +
Preference number: 4 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVGFHLD*CCRTIC
Trigger: ACAAATGGTTCTGCAACAGCAATCAAGGTGGAAGCC...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCACTCTGTGCACATACTaGACAGCCTTGACTTTCATC +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFTLCTY*TALTFI
Trigger: GATGAAAGTCAAGGCTGTGCAGTATGTGCACAGAGT...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTTCGAATAAAGGTAACTaGAGTATCTCCTTTAAAACC +
Preference number: 4 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSSNKGN*SISFKT
Trigger: GGTTTTAAAGGAGATACTCCAGTTACCTTTATTCGA...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATGTTCATAGCATGCCTTaGCCTCAGAATGATTTCCAC +
Preference number: 4 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYVHSMP*PQNDFH
Trigger: GTGGAAATCATTCTGAGGCCAAGGCATGCTATGAAC...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR TCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTCTCCCAGAACCACTTaGTTGAATTCTGCTCGAATA +
Preference number: 4 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSSPRTT*LNSARI
Trigger: TATTCGAGCAGAATTCAATCAAGTGGTTCTGGGAGA...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCTCTCCCAGAACCACTTaGTTGAATTCTGCTCGAATA +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFSPRTT*LNSARI
Trigger: TATTCGAGCAGAATTCAATCAAGTGGTTCTGGGAGA...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR TCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCAGGGACCACCAACAATaGATGCATCAGGAATGTTAT +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFRDHQQ*MHQECY
Trigger: ATAACATTCCTGATGCATTCATTGTTGGTGGTCCCT...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCCAAAATGGGTTCTTGTaGATCAGACTGCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFQNGFL*IRLQFG
Trigger: TCCAAACTGCAGTCTGATTCACAAGAACCCATTTTG...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTCAGTCTTTTCAGTTTTaGCAGCTTTCCCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSQSFQF*QLSLWV
Trigger: TACCCAAAGGGAAAGCTGGCAAAACTGAAAAGACTG...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTGCTTGTATAAATGGTTaGAACAGTGCCTTGGACATC +
Preference number: 4 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVACING*NSALDI
Trigger: GATGTCCAAGGCACTGTTGCAACCATTTATACAAGC...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTGGAGGCCTCATGAAATaGCATTTCCATTCGAATATC +
Preference number: 4 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSGGLMK*HFHSNI
Trigger: GATATTCGAATGGAAATGGCATTTCATGAGGCCTCC...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGGAGGCCTCATGAAATaGCATTTCCATTCGAATATC +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFGGLMK*HFHSNI
Trigger: GATATTCGAATGGAAATGGCATTTCATGAGGCCTCC...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTCACCTTGATTGCTGTTaGAGAACCATTTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSHLDCC*RTICDS
Trigger: GGAATCACAAATGGTTCTGCAACAGCAATCAAGGTG...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATCTCCATATCACCAACTaGGAAAAGTCCCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYLHITN*EKSLCF
Trigger: AAAACAGAGGGACTTTTCCCAGTTGGTGATATGGAG...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTATCACTCTCCAGTTTaGCCACCTGTTTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSYHSPV*PPVFQT
Trigger: TGTTTGGAAAACAGGTGGCCAAACTGGAGAGTGATA...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGTTCATAGCATGCCTTaGCCTCAGAATGATTTCCAT +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSVHSMP*PQNDFH
Trigger: ATGGAAATCATTCTGAGGCCAAGGCATGCTATGAAC...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340329.7
CDS-3UTR TCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCAAGGCTTTGTCCAGCTaGATTTCCAACACAATGTAT +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFKALSS*ISNTMY
Trigger: ATACATTGTGTTGGAAATTCAGCTGGACAAAGCCTT...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCATACTGCACAGCCTTaGCTTTCATCAAGAAATGTA +
Preference number: 4 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVHTAQP*LSSRNV
Trigger: TACATTTCTTGATGAAAGTCAAGGCTGTGCAGTATG...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTTCTTGTGAATCAGACTaGAGTTTGGAGGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVSCESD*SLEDSS
Trigger: TGAAGAATCCTCCAAACTGCAGTCTGATTCACAAGA...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTGAAGGTATTCCTCTaGCTTGGCAAAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSLKVFL*LGKVLL
Trigger: AAGAAGAACTTTGCCAAGGCAGAGGAATACCTTCAA...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTAATGTTATTAGCTCCTaGAGCCAGAATGTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSNVISS*SQNVGN
Trigger: ATTGCCAACATTCTGGCTCCAGGAGCTAATAACATT...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR TCA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTTTCCAAAGGAGTATCTaGGCTCTGAGATTTTATACT +
Preference number: 4 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVFQRSI*ALRFYT
Trigger: AGTATAAAATCTCAGAGCTCAGATACTCCTTTGGAA...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCACCACCAACAATGAATaGATCAGGAATGTTATTAGC +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFTTNNE*IRNVIS
Trigger: GCTAATAACATTCCTGATGCATTCATTGTTGGTGGT...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGTTGAAGCTGTTCACTaGTTGTATAAATGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSVEAVH*LYKWLQ
Trigger: TTGCAACCATTTATACAAGCAGTGAACAGCTTCAAC...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTGTTGAAGCTGTTCACTaGTTGTATAAATGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSVEAVH*LYKWLQ
Trigger: TTGCAACCATTTATACAAGCAGTGAACAGCTTCAAC...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTCTCTTTATAATATGCTaGTGCCATCTCAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSLFIIC*CHLKVL
Trigger: GAGAACTTTGAGATGGCAGCAGCATATTATAAAGAG...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCCTCTTTATAATATGCTaGTGCCATCTCAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFLFIIC*CHLKVL
Trigger: GAGAACTTTGAGATGGCAGCAGCATATTATAAAGAG...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR GCA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCCTGAAAACACTCTTGTaGTTTGATGTTGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFLKTLL*FDVVFS
Trigger: ACTGAAGACAACATCAAAGCACAAGAGTGTTTTCAG...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGTGTTAGATGGTTTTTaGCTTATACTTGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSVLDGF*LILGSQ
Trigger: TTGGGATCCAAGTATAAGCCAAAAACCATCTAACAC...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR GCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTTTTCTTTATGCACTCTaGTTGATTCCTAAATTCGCT +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSFLYAL*LIPKFA
Trigger: AGCGAATTTAGGAATCAAGCAGAGTGCATAAAGAAA...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTTCTTTATGCACTCTaGTTGATTCCTAAATTCGCT +
Preference number: 4 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSFLYAL*LIPKFA
Trigger: AGCGAATTTAGGAATCAAGCAGAGTGCATAAAGAAA...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR GCA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTTCTCTCTTTATAATATaGTGCTGCCATCTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSSLFII*CCHLKV
Trigger: AACTTTGAGATGGCAGCAGCATATTATAAAGAGAGA...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CCA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGCTCAATAAACATTTaGTCTTTTCATGGACTACAC +
Preference number: 4 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYSSINI*SFHGLH
Trigger: GTGTAGTCCATGAAAAGACCAAATGTTTATTGAGCT...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS GCA 90 bp CCCTCTGTCACGGTGATCTGCACGAGTCTGCCTGCTGATGGCACTTaGTCCATATCACCAACTGGGAAAAGTCCCTCTGTTTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: PSVTVICTSLPADGT*SISPTGKSPSVFFG
Trigger: ACCAAAGAAAACAGAGGGACTTTTCCCAGTTGGTGATATGGAGCAAGTGCCATCAGCAGGCAGACTCGTGCAGATCACCGTGACAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS TCA 90 bp CAAATCATATCCCTCTGTCACGGTGATCTGCACGAGTCTGCCTGCTaGTGGCACTTGCTCCATATCACCAACTGGGAAAAGTCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: QIISLCHGDLHESAC*WHLLHITNWEKSLC
Trigger: ACAGAGGGACTTTTCCCAGTTGGTGATATGGAGCAAGTGCCATCAGCAGGCAGACTCGTGCAGATCACCGTGACAGAGGGATATGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS-3UTR CAA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGCAATTGGCCACTTTTaGGGCCGGGGAACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWAIGHF*GRGTGS
Trigger: GGAACCTGTTCCCCGGCCCAAAAAGTGGCCAATTGC...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTTTGCCAGCTTTCCCTTaGGGTATAGTGACCAGAGGA +
Preference number: 5 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGLPAFP*GIVTRG
Trigger: TCCTCTGGTCACTATACCCAAAGGGAAAGCTGGCAA...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGGTCCATCTGGGCTGCTaGTTGAAGGTATTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWVHLGC*LKVFLC
Trigger: GCAGAGGAATACCTTCAACAAGCAGCCCAGATGGAC...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTGTCCCATGCAGAAAATaGTTCAGCTGGAGGGGTATC +
Preference number: 5 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGVPCRK*FSWRGI
Trigger: GATACCCCTCCAGCTGAACAATTTTCTGCATGGGAC...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS GCA 90 bp GACCAGAGCCAGATATGCCCATACTTCAGCATTGTAGTTGTTCAATaGATTGGCTTCAGAAAGAGCATCCTCAGCCTCTGTGAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: DQSQICPYFSIVVVQ*IGFRKSILSLCELL
Trigger: GAGGAGCTCACAGAGGCTGAGGATGCTCTTTCTGAAGCCAATGCATTGAACAACTACAATGCTGAAGTATGGGCATATCTGGCTCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000495161.5
CDS CCA 90 bp ATAGGGACCACCAACAATGAATGCATCAGGAATGTTATTAGCTCCTaGAGCCAGAATGTTGGCAATTGGCCACTTTTTGGGCCGGGGAAC +
Preference number: 5 (lower is better)
Translates to: IGTTNNECIRNVISS*SQNVGNWPLFGPGN
Trigger: GTTCCCCGGCCCAAAAAGTGGCCAATTGCCAACATTCTGGCTCCAGGAGCTAATAACATTCCTGATGCATTCATTGTTGGTGGTCCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000493787.6
CDS-3UTR CAA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGCAATTGGCCACTTTTaGGGCCGGGGAACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMAIGHF*GRGTGS
Trigger: GGAACCTGTTCCCCGGCCCAAAAAGTGGCCAATTGC...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGGTCCCATGCAGAAAATaGTTCAGCTGGAGGGGTATC +
Preference number: 5 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWVPCRK*FSWRGI
Trigger: GATACCCCTCCAGCTGAACAATTTTCTGCATGGGAC...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAATGCAGCTCCTGGTCTaGTGCCTGAAGCATCCGTGC +
Preference number: 5 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVMQLLV*CLKHPC
Trigger: GCACGGATGCTTCAGGCACAAGACCAGGAGCTGCAT...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394865.2
CDS GCA 90 bp TACACCAGTGCTCTTTTGCTTTGTTACTTGTGCCTGAAGCATCCGTaGCTGAAGCTGTTTGGAGGCCTCATGAAATGCCATTTCCATTCG +
Preference number: 5 (lower is better)
Translates to: YTSALLLCYLCLKHP*LKLFGGLMKCHFHS
Trigger: CGAATGGAAATGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAGAGCACTGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS GCA 90 bp TTCCTCAGTGTCTTCTACACCAGTGCTCTTTTGCTTTGTTACTTGTaGCTGAAGCATCCGTGCCTGAAGCTGTTTGGAGGCCTCATGAAA +
Preference number: 5 (lower is better)
Translates to: FLSVFYTSALLLCYL*LKHPCLKLFGGLMK
Trigger: TTTCATGAGGCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAGAGCACTGGTGTAGAAGACACTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CCA 90 bp GCAGCTCCTGGTCTTGTGCCTGAAGCATCCGTGCCTGAAGCTGTTTaGAGGCCTCATGAAATGCCATTTCCATTCGAATATCATTGTTTT +
Preference number: 5 (lower is better)
Translates to: AAPGLVPEASVPEAV*RPHEMPFPFEYHCF
Trigger: AAAACAATGATATTCGAATGGAAATGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCACAAGACCAGGAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394865.2
ENST00000462684.5
ENST00000495161.5
CDS-3UTR CAA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTTTTTCTTTGGTCTTTTaGGCCATCGCACGAGCAAGT +
Preference number: 5 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGFSLVF*AIARAS
Trigger: ACTTGCTCGTGCGATGGCCAAAAAGACCAAAGAAAA...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGCCAGAATGTTGGCAATaGGCCACTTTTTGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMPECWQ*ATFWAG
Trigger: CCCGGCCCAAAAAGTGGCCAATTGCCAACATTCTGG...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGCCTGGAGCCAGAATGTaGGCAATTGGCCACTTTTTG +
Preference number: 5 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWPGARM*AIGHFL
Trigger: CAAAAAGTGGCCAATTGCCAACATTCTGGCTCCAGG...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTGCTGGGGCTTCCACCTaGATTGCTGTTGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLAGAST*IAVAEP
Trigger: TGGTTCTGCAACAGCAATCAAGGTGGAAGCCCCAGC...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAGCTGGGGCTTCCACCTaGATTGCTGTTGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVAGAST*IAVAEP
Trigger: TGGTTCTGCAACAGCAATCAAGGTGGAAGCCCCAGC...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGTCCCATGCAGAAAATaGTTCAGCTGGAGGGGTATC +
Preference number: 5 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKVPCRK*FSWRGI
Trigger: GATACCCCTCCAGCTGAACAATTTTCTGCATGGGAC...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTCTGACCTGCACAGCCTaGACTTTCATCAAGAAATGT +
Preference number: 5 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGLTCTA*TFIKKC
Trigger: ACATTTCTTGATGAAAGTCAAGGCTGTGCAGGTCAG...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394865.2
CDS GCA 90 bp TCTCCTTTAAAACCTTTCAAATCATATCCCTCTGTCACGGTGATCTaGACGAGTCTGCCTGCTGATGGCACTTGCTCCATATCACCAACT +
Preference number: 5 (lower is better)
Translates to: SPLKPFKSYPSVTVI*TSLPADGTCSISPT
Trigger: AGTTGGTGATATGGAGCAAGTGCCATCAGCAGGCAGACTCGTGCAGATCACCGTGACAGAGGGATATGATTTGAAAGGTTTTAAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS-3UTR CAA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTCCCTCTGTTTTCTTaGGTCTTTTTGGCCATCGCA +
Preference number: 5 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLVPLFS*VFLAIA
Trigger: TGCGATGGCCAAAAAGACCAAAGAAAACAGAGGGAC...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGGTGCAATGGAACTGTaGTTTGAAATGAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: SGKERNSESHAENCSAGGGAMEL*FEMNSV
Trigger: GACAGAGTTCATTTCAAACAACAGTTCCATTGCACC...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAACTGTCCTCAGGATGGTaGAGTTCTCCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: EDSFVLQLQASYGKTLWELSSGW*SSPSSS
Trigger: AGAAGAAGAAGGAGAACTCAACCATCCTGAGGACAG...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp AACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGCCCTGCTTCTACATATaGCTGTCCTTCAGGATTGTG +
Preference number: 5 (lower is better)
Translates to: NSLGRKGTQSPMQKIVQLPCFYI*LSFRIV
Trigger: CACAATCCTGAAGGACAGCAATATGTAGAAGCAGGG...CAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGCCTCTGGCATTCGCTTaGGAACCAAGGCTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMPLAFA*EPRLCP
Trigger: TGGACAAAGCCTTGGTTCCAAAGCGAATGCCAGAGG...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTACCTCTGGCATTCGCTTaGGAACCAAGGCTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVPLAFA*EPRLCP
Trigger: TGGACAAAGCCTTGGTTCCAAAGCGAATGCCAGAGG...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTGGAGGAATCATTTCCTaGACCCTTCTGGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLGGIIS*TLLASS
Trigger: GGAGCTAGCCAGAAGGGTCAAGGAAATGATTCCTCC...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTCTTGTGCTTTGATGTaGTCTTCAGTTAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWSCALM*SSVRRQ
Trigger: CTGCCTCCTAACTGAAGACAACATCAAAGCACAAGA...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTACACCAGTGCTCTTTaGCTTTGTTACTTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWYTSAL*LCYLCL
Trigger: CAGGCACAAGTAACAAAGCAAAAGAGCACTGGTGTA...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCGCTGGGGCTTCCACCTaGATTGCTGTTGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLAGAST*IAVAEP
Trigger: TGGTTCTGCAACAGCAATCAAGGTGGAAGCCCCAGC...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGCTTAAGAATGTGTGTTaGGGCCAGCACCAAGTAATA +
Preference number: 5 (lower is better)
Translates to: SGKERNSESHAENCSAGGLKNVC*GQHQVI
Trigger: TATTACTTGGTGCTGGCCCAAACACACATTCTTAAG...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAGTCCATCTGGGCTGCTaGTTGAAGGTATTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVVHLGC*LKVFLC
Trigger: GCAGAGGAATACCTTCAACAAGCAGCCCAGATGGAC...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS TCA 90 bp AATCAAATCATCCATGCCCAAGGCAGGACTGTTCTCTTAATCCTTTaGTGCTGGACACTCCTGTCCTACCTTCTCCAGAAAGACAGAACA +
Preference number: 5 (lower is better)
Translates to: NQIIHAQGRTVLLIL*CWTLLSYLLQKDRT
Trigger: TGTTCTGTCTTTCTGGAGAAGGTAGGACAGGAGTGTCCAGCATCAAAGGATTAAGAGAACAGTCCTGCCTTGGGCATGGATGATTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS TCA 90 bp TGCCTCAACCCTCAGGGCATTCATAGTCCCTATGCAGGTCACCTCTaGCCTCAAACAGCTTCCTTCATTTTCTGTAGTGTATATGACAAA +
Preference number: 5 (lower is better)
Translates to: CLNPQGIHSPYAGHL*PQTASFIFCSVYDK
Trigger: TTTGTCATATACACTACAGAAAATGAAGGAAGCTGTTTGAGGTCAGAGGTGACCTGCATAGGGACTATGAATGCCCTGAGGGTTGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CCA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTaGAGGGGTATCAGAAAGATGGATTTCCAAAGCCAACTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: WEGKELRVPCRKLFS*RGIRKMDFQSQLFP
Trigger: AGGAAACAGTTGGCTTTGGAAATCCATCTTTCTGATACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000493787.6
ENST00000495161.5
CDS-3UTR CAA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGTTTTCTTTGGTCTTTTaGGCCATCGCACGAGCAAGT +
Preference number: 5 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWFSLVF*AIARAS
Trigger: ACTTGCTCGTGCGATGGCCAAAAAGACCAAAGAAAA...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGTCTCCCAGAACCACTaGATTGAATTCTGCTCGAAT +
Preference number: 5 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWVSQNH*IEFCSN
Trigger: ATTCGAGCAGAATTCAATCAAGTGGTTCTGGGAGAC...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CAA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTTTGCCAGCTTTCCCTTaGGGTATAGTGACCAGAGGA +
Preference number: 5 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSLPAFP*GIVTRG
Trigger: TCCTCTGGTCACTATACCCAAAGGGAAAGCTGGCAA...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTGGAGGAATCATTTCCTaGACCCTTCTGGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTGGIIS*TLLASS
Trigger: GGAGCTAGCCAGAAGGGTCAAGGAAATGATTCCTCC...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTTGTGGTAGTCACTCATaGCCTTCTGAGCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTCGSHS*PSELLL
Trigger: CAGGAGGAGCTCAGAAGGCAATGAGTGACTACCACA...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310715.7
CDS-3UTR CAA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGCACAGCATGCTTGAGTaGTTCTTTGAAAGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: SGKERNSESHAENCSAGGHSMLE*FFESKV
Trigger: TACTTTGCTTTCAAAGAACAACTCAAGCATGCTGTG...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGTGCTTGTATAAATGGTaGCAACAGTGCCTTGGACAT +
Preference number: 5 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWCLYKW*QQCLGH
Trigger: ATGTCCAAGGCACTGTTGCAACCATTTATACAAGCA...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAATCTTGTGCTTTGATGTaGTCTTCAGTTAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: EDSFVLQLQASYGKTLWESCALM*SSVRRQ
Trigger: CTGCCTCCTAACTGAAGACAACATCAAAGCACAAGA...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGTACACCAGTGCTCTTTaGCTTTGTTACTTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWYTSAL*LCYLCL
Trigger: CAGGCACAAGTAACAAAGCAAAAGAGCACTGGTGTA...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGGTTGTGTTAGATGGTTTTaGGCTTATACTTGGATCCCA +
Preference number: 5 (lower is better)
Translates to: WEGKELRVPCRKLFSWRGCVRWF*AYTWIP
Trigger: TGGGATCCAAGTATAAGCCAAAAACCATCTAACACA...ACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGCTTAAGAATGTGTGTTaGGGCCAGCACCAAGTAATA +
Preference number: 5 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKLKNVC*GQHQVI
Trigger: TATTACTTGGTGCTGGCCCAAACACACATTCTTAAG...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGTCCCATGCAGAAAATaGTTCAGCTGGAGGGGTATC +
Preference number: 5 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSVPCRK*FSWRGI
Trigger: GATACCCCTCCAGCTGAACAATTTTCTGCATGGGAC...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS CCA 90 bp CTGACTTTATTTCCTTCAGTTCCAATAAGCCCATCACTTCCCAGATaGATCAGTCTGAACCTCATGATAACCCACTCAGGCTACTTTCTC +
Preference number: 5 (lower is better)
Translates to: LTLFPSVPISPSLPR*ISLNLMITHSGYFL
Trigger: GAGAAAGTAGCCTGAGTGGGTTATCATGAGGTTCAGACTGATCCATCTGGGAAGTGATGGGCTTATTGGAACTGAAGGAAATAAAGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS-3UTR CAA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGAAACTGCTAGTGAAGTaGTATTTTGCACTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SGKERNSESHAENCSAGGKLLVK*YFALPS
Trigger: AGAAGGAAGTGCAAAATACAACTTCACTAGCAGTTT...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CAA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCCCTGGAGCCAGAATGTaGGCAATTGGCCACTTTTTG +
Preference number: 5 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLPGARM*AIGHFL
Trigger: CAAAAAGTGGCCAATTGCCAACATTCTGGCTCCAGG...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGCTGTTCACTGCTaGTATAAATGGTTGCAACAG +
Preference number: 5 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWEAVHC*YKWLQQ
Trigger: CTGTTGCAACCATTTATACAAGCAGTGAACAGCTTC...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp TCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAGGGAAAGAAAATTTCTGCTaGCTCATAGTTCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: SGKERNSESHAENCSAGGKENFC*LIVLQQ
Trigger: CTGTTGGAGAACTATGAGCAAGCAGAAATTTTCTTT...CCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGGAATCAGACTGCAGTTaGGAGGATTCTTCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWESDCS*EDSSRN
Trigger: ATTTCTTGAAGAATCCTCCAAACTGCAGTCTGATTC...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp TCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGAAAGGAATCAGACTGCAGTTaGGAGGATTCTTCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: SFVLQLQASYGKTLWEGKESDCS*EDSSRN
Trigger: ATTTCTTGAAGAATCCTCCAAACTGCAGTCTGATTC...CTTTCCTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS CCA 90 bp AACATGAAAAGCTCCCCGAATTCTCTTCACACCTGGATACAACAATaGGACCATATTAACATAAGCCACACCATGAAACGAAAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: NMKSSPNSLHTWIQQ*DHINISHTMKRKLS
Trigger: GCTCAGCTTTCGTTTCATGGTGTGGCTTATGTTAATATGGTCCCATTGTTGTATCCAGGTGTGAAGAGAATTCGGGGAGCTTTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTCCAGAATGTTGGCAATaGGCCACTTTTTGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSPECWQ*ATFWAG
Trigger: CCCGGCCCAAAAAGTGGCCAATTGCCAACATTCTGG...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTGTCCTCAGGATGGTaGAGTTCTCCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTLSSGW*SSPSSS
Trigger: AGAAGAAGAAGGAGAACTCAACCATCCTGAGGACAG...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGTTCAAATGCAAAGAGTaGAAGCTGTTCACTGCTTGT +
Preference number: 5 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKFKCKE*KLFTAC
Trigger: ACAAGCAGTGAACAGCTTCAACTCTTTGCATTTGAA...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGATCTCAAAGTTCTCATaGACTTCTGCTTCAAATGCA +
Preference number: 5 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWISKFS*TSASNA
Trigger: TGCATTTGAAGCAGAAGTCAATGAGAACTTTGAGAT...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp ACTCTCTGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATTGTTCAGCTGGAAAGAAAATTTCTGCTaGCTCATAGTTCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: TLWEGKELRVPCRKLFSWKENFC*LIVLQQ
Trigger: CTGTTGGAGAACTATGAGCAAGCAGAAATTTTCTTT...CCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCAGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCCTTTTGCTTTGTTACTaGTGCCTGAAGCATCCGTGC +
Preference number: 5 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLLLLCY*CLKHPC
Trigger: GCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAG...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTTTTGCTTTGTTACTaGTGCCTGAAGCATCCGTGC +
Preference number: 5 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTLLLCY*CLKHPC
Trigger: GCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAG...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp AGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAATCAGACTGCAGTTaGGAGGATTCTTCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: SEDSFVLQLQASYGKTLWESDCS*EDSSRN
Trigger: ATTTCTTGAAGAATCCTCCAAACTGCAGTCTGATTC...CCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAACATACTGCACAGCCTaGACTTTCATCAAGAAATGT +
Preference number: 5 (lower is better)
Translates to: EDSFVLQLQASYGKTLWETYCTA*TFIKKC
Trigger: ACATTTCTTGATGAAAGTCAAGGCTGTGCAGTATGT...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGGCCTCAGTTATGTTTTaGACAACTATAGCAACCAAC +
Preference number: 5 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKASVMF*TTIATN
Trigger: GTTGGTTGCTATAGTTGTCAAAAACATAACTGAGGC...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340329.7
CDS TCA 90 bp GAAGACTCTGATGCTCTACAGAGAAAAGAAAGTGCTCTCAGTTCTTaGCACTTACCTGGTTTAGGGCTACATGCATCTGATCTACTAAGA +
Preference number: 5 (lower is better)
Translates to: EDSDALQRKESALSS*HLPGLGLHASDLLR
Trigger: TCTTAGTAGATCAGATGCATGTAGCCCTAAACCAGGTAAGTGTCAAGAACTGAGAGCACTTTCTTTTCTCTGTAGAGCATCAGAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS GCA 90 bp CAAAGAGTTGAAGCTGTTCACTGCTTGTATAAATGGTTGCAACAGTaGCTTGGACATCATCTGGCATGGTCTTGTCAATGTCAAGATGTT +
Preference number: 5 (lower is better)
Translates to: QRVEAVHCLYKWLQQ*LGHHLAWSCQCQDV
Trigger: AACATCTTGACATTGACAAGACCATGCCAGATGATGTCCAAGGCACTGTTGCAACCATTTATACAAGCAGTGAACAGCTTCAACTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CCA 90 bp ACTTCTGCTCCTCCAAGGTTTCACTATCCATATCACTCTCCAGTTTaGCCACCTGTTTTCCAAACATTCTGTAGTATTCATCTAGAATGG +
Preference number: 5 (lower is better)
Translates to: TSAPPRFHYPYHSPV*PPVFQTFCSIHLEW
Trigger: CCATTCTAGATGAATACTACAGAATGTTTGGAAAACAGGTGGCCAAACTGGAGAGTGATATGGATAGTGAAACCTTGGAGGAGCAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000493787.6
CDS CCA 90 bp TTTGCTTTGTTACTTGTGCCTGAAGCATCCGTGCCTGAAGCTGTTTaGAGGCCTCATGAAATGCCATTTCCATTCGAATATCATTGTTTT +
Preference number: 5 (lower is better)
Translates to: FALLLVPEASVPEAV*RPHEMPFPFEYHCF
Trigger: AAAACAATGATATTCGAATGGAAATGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS-3UTR CAA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGGTGCAATGGAACTGTaGTTTGAAATGAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMGAMEL*FEMNSV
Trigger: GACAGAGTTCATTTCAAACAACAGTTCCATTGCACC...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CAA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCATATCACTCTCCAGTTaGGCCACCTGTTTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLISLSS*ATCFPN
Trigger: GTTTGGAAAACAGGTGGCCAAACTGGAGAGTGATAT...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp TGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGGAATTTACCACAGCATGCTaGAGTTGTTCTTTGAAAGCA +
Preference number: 5 (lower is better)
Translates to: CDPVSRQPVKHPVTQPMEFTTAC*SCSLKA
Trigger: TGCTTTCAAAGAACAACTCAAGCATGCTGTGGTAAA...TTCCATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTTGCTTGTATAAATGGTaGCAACAGTGCCTTGGACAT +
Preference number: 5 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSCLYKW*QQCLGH
Trigger: ATGTCCAAGGCACTGTTGCAACCATTTATACAAGCA...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTGAAGCTGTTCACTGCTaGTATAAATGGTTGCAACAG +
Preference number: 5 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLEAVHC*YKWLQQ
Trigger: CTGTTGCAACCATTTATACAAGCAGTGAACAGCTTC...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAGAAGCTGTTCACTGCTaGTATAAATGGTTGCAACAG +
Preference number: 5 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVEAVHC*YKWLQQ
Trigger: CTGTTGCAACCATTTATACAAGCAGTGAACAGCTTC...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp GAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAATCTCAAAGTTCTCATaGACTTCTGCTTCAAATGCA +
Preference number: 5 (lower is better)
Translates to: EDSFVLQLQASYGKTLWEISKFS*TSASNA
Trigger: TGCATTTGAAGCAGAAGTCAATGAGAACTTTGAGAT...TTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp AAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTGGGAAGAAAGAAAATTTCTGCTaGCTCATAGTTCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: KILSFSSSRLHTVKLSGKKENFC*LIVLQQ
Trigger: CTGTTGGAGAACTATGAGCAAGCAGAAATTTTCTTT...CTTCCCAGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTACACCAGTGCTCTTTaGCTTTGTTACTTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLYTSAL*LCYLCL
Trigger: CAGGCACAAGTAACAAAGCAAAAGAGCACTGGTGTA...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp TATTGTGACCCAGTTTCTCGTCAACCAGTAAAACATCCAGTAACACAGCCAATGCTTAAGAATGTGTGTTaGGGCCAGCACCAAGTAATA +
Preference number: 5 (lower is better)
Translates to: YCDPVSRQPVKHPVTQPMLKNVC*GQHQVI
Trigger: TATTACTTGGTGCTGGCCCAAACACACATTCTTAAG...CATTGGCTGTGTTACTGGATGTTTTACTGGTTGACGAGAAACTGGGTCACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGTCCATCTGGGCTGCTaGTTGAAGGTATTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSVHLGC*LKVFLC
Trigger: GCAGAGGAATACCTTCAACAAGCAGCCCAGATGGAC...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTCCATCTGGGCTGCTaGTTGAAGGTATTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFVHLGC*LKVFLC
Trigger: GCAGAGGAATACCTTCAACAAGCAGCCCAGATGGAC...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTGTCCCTCTGTTTTCTTaGGTCTCTGCAGCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSVPLFS*VSAAAS
Trigger: TGAGGCTGCTGCAGAGACCAAAGAAAACAGAGGGAC...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340329.7
CDS GCA 90 bp TGCCTGAAGCATCCGTGCCTGAAGCTGTTTGGAGGCCTCATGAAATaGCATTTCCATTCGAATATCATTGTTTTGAATTTCATAGTACAA +
Preference number: 5 (lower is better)
Translates to: CLKHPCLKLFGGLMK*HFHSNIIVLNFIVQ
Trigger: TTGTACTATGAAATTCAAAACAATGATATTCGAATGGAAATGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000493787.6
ENST00000495161.5
CDS GCA 90 bp CATCTCAGAAGCATCCACTACAAAGCTAATGGTTCGTTCATAGCATaGCTTGGCCTCAGAATGATTTCCATTCAGAGTTCCATTCTTAAA +
Preference number: 5 (lower is better)
Translates to: HLRSIHYKANGSFIA*LGLRMISIQSSILK
Trigger: TTTAAGAATGGAACTCTGAATGGAAATCATTCTGAGGCCAAGGCATGCTATGAACGAACCATTAGCTTTGTAGTGGATGCTTCTGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340329.7
CDS-3UTR CAA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTTTCAAATGCAAAGAGTaGAAGCTGTTCACTGCTTGT +
Preference number: 5 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLFKCKE*KLFTAC
Trigger: ACAAGCAGTGAACAGCTTCAACTCTTTGCATTTGAA...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTAAACACTCTTGTGCTTaGATGTTGTCTTCAGTTAGG +
Preference number: 5 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSKHSCA*MLSSVR
Trigger: CCTAACTGAAGACAACATCAAAGCACAAGAGTGTTT...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp TCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAGAATCAGACTGCAGTTaGGAGGATTCTTCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: SLFIVKILSFSSSRLHTVESDCS*EDSSRN
Trigger: ATTTCTTGAAGAATCCTCCAAACTGCAGTCTGATTC...TACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTACTTGGATCCCAAGTTaGTGTAGTCAAAATGGGTTC +
Preference number: 5 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTTWIPS*CSQNGF
Trigger: GAACCCATTTTGACTACACAAACTTGGGATCCAAGT...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp ATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCTCTTGTGTTAGATGGTTTTaGGCTTATACTTGGATCCCA +
Preference number: 5 (lower is better)
Translates to: IVKILSFSSSRLHTVKLSCVRWF*AYTWIP
Trigger: TGGGATCCAAGTATAAGCCAAAAACCATCTAACACA...AGAGAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp ATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTTGTGTTAGATGGTTTTaGGCTTATACTTGGATCCCA +
Preference number: 5 (lower is better)
Translates to: MNGSLFIVKILSFSSSRLCVRWF*AYTWIP
Trigger: TGGGATCCAAGTATAAGCCAAAAACCATCTAACACA...AAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAACAGAGACCCATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTGTCCCATGCAGAAAATaGTTCAGCTGGAGGGGTATC +
Preference number: 5 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSVPCRK*FSWRGI
Trigger: GATACCCCTCCAGCTGAACAATTTTCTGCATGGGAC...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS TCA 90 bp CCTTCTGGAGAAACAGTAATTTTTGCAGAGTCTCCCAGAACCACTTaGTTGAATTCTGCTCGAATAAAGGTAACTGGAGTATCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: PSGETVIFAESPRTT*LNSARIKVTGVSPL
Trigger: TAAAGGAGATACTCCAGTTACCTTTATTCGAGCAGAATTCAATCAAGTGGTTCTGGGAGACTCTGCAAAAATTACTGTTTCTCCAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS GCA 90 bp ATATGCTGCTGCCATCTCAAAGTTCTCATTGACTTCTGCTTCAAATaGAAAGAGTTGAAGCTGTTCACTGCTTGTATAAATGGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: ICCCHLKVLIDFCFK*KELKLFTACINGCN
Trigger: GTTGCAACCATTTATACAAGCAGTGAACAGCTTCAACTCTTTGCATTTGAAGCAGAAGTCAATGAGAACTTTGAGATGGCAGCAGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CCA 90 bp GTCTCCCAGAACCACTTGATTGAATTCTGCTCGAATAAAGGTAACTaGAGTATCTCCTTTAAAACCTTTCAAATCATATCCCTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: VSQNHLIEFCSNKGN*SISFKTFQIISLCH
Trigger: GTGACAGAGGGATATGATTTGAAAGGTTTTAAAGGAGATACTCCAGTTACCTTTATTCGAGCAGAATTCAATCAAGTGGTTCTGGGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS-3UTR CAA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATGTCCCTCTGTTTTCTTaGGTCTTTTTGGCCATCGCA +
Preference number: 5 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYVPLFS*VFLAIA
Trigger: TGCGATGGCCAAAAAGACCAAAGAAAACAGAGGGAC...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTCCCTGCTTCTACATATaGCTGTCCTTCAGGATTGTG +
Preference number: 5 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSPCFYI*LSFRIV
Trigger: CACAATCCTGAAGGACAGCAATATGTAGAAGCAGGG...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTCTTTTGCTTTGTTACTaGTGCCTGAAGCATCCGTGC +
Preference number: 5 (lower is better)
Translates to: VTQPMEINEWVSVYSEDSLLLCY*CLKHPC
Trigger: GCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAG...AGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp TTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTCACATACTGCACAGCCTaGACTTTCATCAAGAAATGT +
Preference number: 5 (lower is better)
Translates to: FIVKILSFSSSRLHTVKLTYCTA*TFIKKC
Trigger: ACATTTCTTGATGAAAGTCAAGGCTGTGCAGTATGT...GAGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS GCA 90 bp TTGTATCGCTTTCTTTTCAGTCTCAGAGAAAGAGGTATTGCAGCCTaGACTGTTCCAAAGTTAATCCTTCCATTTAAATTCTTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: LYRFLFSLRERGIAA*TVPKLILPFKFLVL
Trigger: AAGGACCAAGAATTTAAATGGAAGGATTAACTTTGGAACAGTGCAGGCTGCAATACCTCTTTCTCTGAGACTGAAAAGAAAGCGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS GCA 90 bp TTTCTCACCAGCATACTTTCATCTCAGGCATCCTTGTCCTTCTCCTaGATTTGTCCTGAAAATTCTCAACTTAAAACAATAGCACAATCT +
Preference number: 5 (lower is better)
Translates to: FLTSILSSQASLSFS*ICPENSQLKTIAQS
Trigger: AGATTGTGCTATTGTTTTAAGTTGAGAATTTTCAGGACAAATGCAGGAGAAGGACAAGGATGCCTGAGATGAAAGTATGCTGGTGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS-3UTR CAA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTTCAGTCTTTTCAGTTTaGCCAGCTTTCCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVSVFSV*PAFPLG
Trigger: ACCCAAAGGGAAAGCTGGCAAAACTGAAAAGACTGA...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTTCAGTCTTTTCAGTTTaGCCAGCTTTCCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSSVFSV*PAFPLG
Trigger: ACCCAAAGGGAAAGCTGGCAAAACTGAAAAGACTGA...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GTTTATAGTGAAGATTCTTTCGTTCTCCAGCTCCAGGCTTCATACGGTAAAACTATTCTTAGAAACAGCTaGTTTGGACAGCAGAGAATT +
Preference number: 5 (lower is better)
Translates to: VYSEDSFVLQLQASYGKTILRNS*FGQQRI
Trigger: AATTCTCTGCTGTCCAAACAAGCTGTTTCTAAGAAT...AGTTTTACCGTATGAAGCCTGGAGCTGGAGAACGAAAGAATCTTCACTATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATATATCACTCTCCAGTTaGGCCACCTGTTTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYISLSS*ATCFPN
Trigger: GTTTGGAAAACAGGTGGCCAAACTGGAGAGTGATAT...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATTCTTGTGCTTTGATGTaGTCTTCAGTTAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYSCALM*SSVRRQ
Trigger: CTGCCTCCTAACTGAAGACAACATCAAAGCACAAGA...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS TCA 90 bp ATAGAGCTCACTGATAAATGTCTGAAGTTCCTCCTGGCTTTCAAATaGTGTTGTCTTCAAGTATTTATCTCTCACAATCTTTACCACAGC +
Preference number: 5 (lower is better)
Translates to: IELTDKCLKFLLAFK*CCLQVFISHNLYHS
Trigger: GCTGTGGTAAAGATTGTGAGAGATAAATACTTGAAGACAACATCATTTGAAAGCCAGGAGGAACTTCAGACATTTATCAGTGAGCTCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000493787.6
CDS CCA 90 bp GAGAGCAGGTCTGGTGTAATTAGGAATCTCCTGAGTCAGAAGCTATaGTCAAGAAAGAGTCCACAAAATTCTTTAATTAGAAGTCAAAAT +
Preference number: 5 (lower is better)
Translates to: ESRSGVIRNLLSQKL*SRKSPQNSLIRSQN
Trigger: ATTTTGACTTCTAATTAAAGAATTTTGTGGACTCTTTCTTGACCATAGCTTCTGACTCAGGAGATTCCTAATTACACCAGACCTGCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS-3UTR CAA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATGGTGCAATGGAACTGTaGTTTGAAATGAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYGAMEL*FEMNSV
Trigger: GACAGAGTTCATTTCAAACAACAGTTCCATTGCACC...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CAA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTACTTGGATCCCAAGTTaGTGTAGTCAAAATGGGTTC +
Preference number: 5 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVTWIPS*CSQNGF
Trigger: GAACCCATTTTGACTACACAAACTTGGGATCCAAGT...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATACTTGGATCCCAAGTTaGTGTAGTCAAAATGGGTTC +
Preference number: 5 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYTWIPS*CSQNGF
Trigger: GAACCCATTTTGACTACACAAACTTGGGATCCAAGT...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTACTTGGATCCCAAGTTaGTGTAGTCAAAATGGGTTC +
Preference number: 5 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSTWIPS*CSQNGF
Trigger: GAACCCATTTTGACTACACAAACTTGGGATCCAAGT...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS-3UTR CAA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCCTTAAGAATGTGTGTTaGGGCCAGCACCAAGTAATA +
Preference number: 5 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFLKNVC*GQHQVI
Trigger: TATTACTTGGTGCTGGCCCAAACACACATTCTTAAG...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS GCA 90 bp AACAGTAATTTTTGCAGAGTCTCCCAGAACCACTTGATTGAATTCTaGTCGAATAAAGGTAACTGGAGTATCTCCTTTAAAACCTTTCAA +
Preference number: 5 (lower is better)
Translates to: NSNFCRVSQNHLIEF*SNKGNWSISFKTFQ
Trigger: TTGAAAGGTTTTAAAGGAGATACTCCAGTTACCTTTATTCGAGCAGAATTCAATCAAGTGGTTCTGGGAGACTCTGCAAAAATTACTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS-3UTR CAA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATCACAGCATGCTTGAGTaGTTCTTTGAAAGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYHSMLE*FFESKV
Trigger: TACTTTGCTTTCAAAGAACAACTCAAGCATGCTGTG...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCTTTACCACAGCATGCTaGAGTTGTTCTTTGAAAGCA +
Preference number: 5 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFFTTAC*SCSLKA
Trigger: TGCTTTCAAAGAACAACTCAAGCATGCTGTGGTAAA...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATTTCAAATGCAAAGAGTaGAAGCTGTTCACTGCTTGT +
Preference number: 5 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYFKCKE*KLFTAC
Trigger: ACAAGCAGTGAACAGCTTCAACTCTTTGCATTTGAA...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTAAACACTCTTGTGCTTaGATGTTGTCTTCAGTTAGG +
Preference number: 5 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVKHSCA*MLSSVR
Trigger: CCTAACTGAAGACAACATCAAAGCACAAGAGTGTTT...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTAAACACTCTTGTGCTTaGATGTTGTCTTCAGTTAGG +
Preference number: 5 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSKHSCA*MLSSVR
Trigger: CCTAACTGAAGACAACATCAAAGCACAAGAGTGTTT...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCACATACTGCACAGCCTaGACTTTCATCAAGAAATGT +
Preference number: 5 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFTYCTA*TFIKKC
Trigger: ACATTTCTTGATGAAAGTCAAGGCTGTGCAGTATGT...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS CCA 90 bp TCTTTCTTTGTTGGTATCTCCTTGATAAATGTGTTAGATGGTTTTTaGCTTATACTTGGATCCCAAGTTTGTGTAGTCAAAATGGGTTCT +
Preference number: 5 (lower is better)
Translates to: SFFVGISLINVLDGF*LILGSQVCVVKMGS
Trigger: AGAACCCATTTTGACTACACAAACTTGGGATCCAAGTATAAGCCAAAAACCATCTAACACATTTATCAAGGAGATACCAACAAAGAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000495161.5
CDS-3UTR CAA 90 bp ACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCAAACTGCTAGTGAAGTaGTATTTTGCACTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TQPMEINEWVSVYSEDSFKLLVK*YFALPS
Trigger: AGAAGGAAGTGCAAAATACAACTTCACTAGCAGTTT...GAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CAA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTAAACTGCTAGTGAAGTaGTATTTTGCACTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSKLLVK*YFALPS
Trigger: AGAAGGAAGTGCAAAATACAACTTCACTAGCAGTTT...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS-3UTR CAA 90 bp AAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTATTCTTAGAAACAGCTaGTTTGGACAGCAGAGAATT +
Preference number: 5 (lower is better)
Translates to: KHPVTQPMEINEWVSVYSILRNS*FGQQRI
Trigger: AATTCTCTGCTGTCCAAACAAGCTGTTTCTAAGAAT...ACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS-3UTR CAA 90 bp GTAAAACATCCAGTAACACAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATATCTCAAAGTTCTCATaGACTTCTGCTTCAAATGCA +
Preference number: 5 (lower is better)
Translates to: VKHPVTQPMEINEWVSVYISKFS*TSASNA
Trigger: TGCATTTGAAGCAGAAGTCAATGAGAACTTTGAGAT...ATAAACAGAGACCCATTCATTTATTTCCATTGGCTGTGTTACTGGATGTTTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS-3UTR CAA 90 bp CAGCCAATGGAAATAAATGAATGGGTCTCTGTTTATAGTGAAGATTCTTTCGTTAAAGAAAATTTCTGCTaGCTCATAGTTCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: QPMEINEWVSVYSEDSFVKENFC*LIVLQQ
Trigger: CTGTTGGAGAACTATGAGCAAGCAGAAATTTTCTTT...AACGAAAGAATCTTCACTATAAACAGAGACCCATTCATTTATTTCCATTGGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
CDS TCA 72 bp TCCCTCTGTCACGGTGATCTGCACGAGTCTGCCTGCTaGTGGCACTTGCTCCATATCACCAACTGGGAAAAG +
Preference number: 6 (lower is better)
Translates to: SLCHGDLHESAC*WHLLHITNWEK
Trigger: CTTTTCCCAGTTGGTGATATGGAGCAAGTGCCATCAGCAGGCAGACTCGTGCAGATCACCGTGACAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS GCA 72 bp ACGGTGATCTGCACGAGTCTGCCTGCTGATGGCACTTaGTCCATATCACCAACTGGGAAAAGTCCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: TVICTSLPADGT*SISPTGKSPSV
Trigger: AACAGAGGGACTTTTCCCAGTTGGTGATATGGAGCAAGTGCCATCAGCAGGCAGACTCGTGCAGATCACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS CCA 72 bp TTGCAGACCGACCATGTAGTTCTGCCCAGGACCTGTTaGAATGAAGGATTCAGGCACAGAGTAAGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: LQTDHVVLPRTC*NEGFRHRVSSL
Trigger: GAGGCTGCTTACTCTGTGCCTGAATCCTTCATTCCAACAGGTCCTGGGCAGAACTACATGGTCGGTCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS GCA 72 bp ATAATGCAGCTCCTGGTCTTGTGCCTGAAGCATCCGTaGCTGAAGCTGTTTGGAGGCCTCATGAAATGCCAT +
Preference number: 6 (lower is better)
Translates to: IMQLLVLCLKHP*LKLFGGLMKCH
Trigger: ATGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCACAAGACCAGGAGCTGCATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394865.2
ENST00000462684.5
ENST00000495161.5
CDS CCA 72 bp TGTGTGTTTGGGCCAGCACCAAGTAATATTCACAGCTaGGGCCTCCTTGAGGGCATAACAGCTCATGTGCAA +
Preference number: 6 (lower is better)
Translates to: CVFGPAPSNIHS*GLLEGITAHVQ
Trigger: TTGCACATGAGCTGTTATGCCCTCAAGGAGGCCCCAGCTGTGAATATTACTTGGTGCTGGCCCAAACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000493787.6
ENST00000495161.5
CDS CCA 72 bp AATGTTATTAGCTCCTGGAGCCAGAATGTTGGCAATTaGCCACTTTTTGGGCCGGGGAACAGGTTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: NVISSWSQNVGN*PLFGPGNRFPF
Trigger: GAAAGGGAACCTGTTCCCCGGCCCAAAAAGTGGCCAATTGCCAACATTCTGGCTCCAGGAGCTAATAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000493787.6
CDS CAA 72 bp CCCTCTTTCCTCAGTGTCTTCTACACCAGTGCTCTTTaGCTTTGTTACTTGTGCCTGAAGCATCCGTGCCTG +
Preference number: 6 (lower is better)
Translates to: PSFLSVFYTSAL*LCYLCLKHPCL
Trigger: CAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAGAGCACTGGTGTAGAAGACACTGAGGAAAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CAA 90 bp TCTTTCCTCAGTGTCTTCTACACCAGTGCTCTTTTGCTTTGTTACTaGTGCCTGAAGCATCCGTGCCTGAAGCTGTTTGGAGGCCTCATG +
Preference number: 6 (lower is better)
Translates to: SFLSVFYTSALLLCY*CLKHPCLKLFGGLM
Trigger: CATGAGGCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAGAGCACTGGTGTAGAAGACACTGAGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CAA 90 bp TCTTCCCTCTTTCCTCAGTGTCTTCTACACCAGTGCTCTTTTGCTTaGTTACTTGTGCCTGAAGCATCCGTGCCTGAAGCTGTTTGGAGG +
Preference number: 6 (lower is better)
Translates to: SSLFPQCLLHQCSFA*LLVPEASVPEAVWR
Trigger: CCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAGAGCACTGGTGTAGAAGACACTGAGGAAAGAGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS TCA 72 bp ATCCATGCCCAAGGCAGGACTGTTCTCTTAATCCTTTaGTGCTGGACACTCCTGTCCTACCTTCTCCAGAAA +
Preference number: 6 (lower is better)
Translates to: IHAQGRTVLLIL*CWTLLSYLLQK
Trigger: TTTCTGGAGAAGGTAGGACAGGAGTGTCCAGCATCAAAGGATTAAGAGAACAGTCCTGCCTTGGGCATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS GCA 72 bp AAACCTTTCAAATCATATCCCTCTGTCACGGTGATCTaGACGAGTCTGCCTGCTGATGGCACTTGCTCCATA +
Preference number: 6 (lower is better)
Translates to: KPFKSYPSVTVI*TSLPADGTCSI
Trigger: TATGGAGCAAGTGCCATCAGCAGGCAGACTCGTGCAGATCACCGTGACAGAGGGATATGATTTGAAAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS GCA 72 bp GCTCTTTTGCTTTGTTACTTGTGCCTGAAGCATCCGTaGCTGAAGCTGTTTGGAGGCCTCATGAAATGCCAT +
Preference number: 6 (lower is better)
Translates to: ALLLCYLCLKHP*LKLFGGLMKCH
Trigger: ATGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CCA 72 bp GGTCTTGTGCCTGAAGCATCCGTGCCTGAAGCTGTTTaGAGGCCTCATGAAATGCCATTTCCATTCGAATAT +
Preference number: 6 (lower is better)
Translates to: GLVPEASVPEAV*RPHEMPFPFEY
Trigger: ATATTCGAATGGAAATGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCACAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394865.2
ENST00000462684.5
ENST00000495161.5
CDS CAA 90 bp TTCTCTCTTCCCTCTTTCCTCAGTGTCTTCTACACCAGTGCTCTTTaGCTTTGTTACTTGTGCCTGAAGCATCCGTGCCTGAAGCTGTTT +
Preference number: 6 (lower is better)
Translates to: FSLPSFLSVFYTSAL*LCYLCLKHPCLKLF
Trigger: AAACAGCTTCAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAGAGCACTGGTGTAGAAGACACTGAGGAAAGAGGGAAGAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS TCA 72 bp GTCCCTGCTTCTACATATTGCTGTCCTTCAGGATTGTaGCTTAGAGGGGGTTCACCTTCCAAAGGAGTATCT +
Preference number: 6 (lower is better)
Translates to: VPASTYCCPSGL*LRGGSPSKGVS
Trigger: AGATACTCCTTTGGAAGGTGAACCCCCTCTAAGTCACAATCCTGAAGGACAGCAATATGTAGAAGCAGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000493787.6
CDS GCA 72 bp GAAGCTGTTCACTGCTTGTATAAATGGTTGCAACAGTaGCTTGGACATCATCTGGCATGGTCTGGTTTAGGG +
Preference number: 6 (lower is better)
Translates to: EAVHCLYKWLQQ*LGHHLAWSGLG
Trigger: CCCTAAACCAGACCATGCCAGATGATGTCCAAGGCACTGTTGCAACCATTTATACAAGCAGTGAACAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
CDS CAA 72 bp CTAAGGGTGAGCCTTGCACAGGGTGCAATGGAACTGTaGTTTGAAATGAACTCTGTCCTTCCAGTAAGGGAA +
Preference number: 6 (lower is better)
Translates to: LRVSLAQGAMEL*FEMNSVLPVRE
Trigger: TTCCCTTACTGGAAGGACAGAGTTCATTTCAAACAACAGTTCCATTGCACCCTGTGCAAGGCTCACCCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
CDS CAA 72 bp AGTGTCTTCTACACCAGTGCTCTTTTGCTTTGTTACTaGTGCCTGAAGCATCCGTGCCTGAAGCTGTTTGGA +
Preference number: 6 (lower is better)
Translates to: SVFYTSALLLCY*CLKHPCLKLFG
Trigger: TCCAAACAGCTTCAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAGAGCACTGGTGTAGAAGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CAA 72 bp TTTCCTCAGTGTCTTCTACACCAGTGCTCTTTTGCTTaGTTACTTGTGCCTGAAGCATCCGTGCCTGAAGCT +
Preference number: 6 (lower is better)
Translates to: FPQCLLHQCSFA*LLVPEASVPEA
Trigger: AGCTTCAGGCACGGATGCTTCAGGCACAAGTAACAAAGCAAAAGAGCACTGGTGTAGAAGACACTGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CAA 90 bp AAATCAAATCATCCATGCCCAAGGCAGGACTGTTCTCTTAATCCTTaGATGCTGGACACTCCTGTCCTACCTTCTCCAGAAAGACAGAAC +
Preference number: 6 (lower is better)
Translates to: KSNHPCPRQDCSLNP*MLDTPVLPSPERQN
Trigger: GTTCTGTCTTTCTGGAGAAGGTAGGACAGGAGTGTCCAGCATCAAAGGATTAAGAGAACAGTCCTGCCTTGGGCATGGATGATTTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS GCA 72 bp CTGGGGCTCACGGACCAATCTCTCTTTATAATATGCTaGTGCCATCTCAAAGTTCTCATTGACTTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LGLTDQSLFIIC*CHLKVLIDFCF
Trigger: GAAGCAGAAGTCAATGAGAACTTTGAGATGGCAGCAGCATATTATAAAGAGAGATTGGTCCGTGAGCCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CCA 72 bp TTACTTGTGCCTGAAGCATCCGTGCCTGAAGCTGTTTaGAGGCCTCATGAAATGCCATTTCCATTCGAATAT +
Preference number: 6 (lower is better)
Translates to: LLVPEASVPEAV*RPHEMPFPFEY
Trigger: ATATTCGAATGGAAATGGCATTTCATGAGGCCTCCAAACAGCTTCAGGCACGGATGCTTCAGGCACAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CAA 72 bp TTCCAAGCAAGTAGCATCCTCAAAGAAAATTTCTGCTaGCTCATAGTTCTCCAACAGGACAGCCAGGACACC +
Preference number: 6 (lower is better)
Translates to: FQASSILKENFC*LIVLQQDSQDT
Trigger: GGTGTCCTGGCTGTCCTGTTGGAGAACTATGAGCAAGCAGAAATTTTCTTTGAGGATGCTACTTGCTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CAA 72 bp TGGGAAGGAAAGGAACTCAGAGTCCCATGCAGAAAATaGTTCAGCTGGAGGGGTATCAGAAAGATGGATTTC +
Preference number: 6 (lower is better)
Translates to: WEGKELRVPCRK*FSWRGIRKMDF
Trigger: GAAATCCATCTTTCTGATACCCCTCCAGCTGAACAATTTTCTGCATGGGACTCTGAGTTCCTTTCCTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000493787.6
ENST00000495161.5
CDS CAA 90 bp ATTAGTTGGTTCCAAGCAAGTAGCATCCTCAAAGAAAATTTCTGCTaGCTCATAGTTCTCCAACAGGACAGCCAGGACACCACACAGCAA +
Preference number: 6 (lower is better)
Translates to: ISWFQASSILKENFC*LIVLQQDSQDTTQQ
Trigger: TTGCTGTGTGGTGTCCTGGCTGTCCTGTTGGAGAACTATGAGCAAGCAGAAATTTTCTTTGAGGATGCTACTTGCTTGGAACCAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS TCA 72 bp GGTAAAACTTCAGTCACAGTTAAGAACACAGGTTTGTaGGCGAGGTCATCTGAAGTGATTCCTCCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: GKTSVTVKNTGL*ARSSEVIPPSG
Trigger: TCCTGAAGGAGGAATCACTTCAGATGACCTCGCTCACAAACCTGTGTTCTTAACTGTGACTGAAGTTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS GCA 72 bp AGCATCCACTACAAAGCTAATGGTTCGTTCATAGCATaGCTTGGCCTCAGAATGATTTCCATTCAGAGTTCC +
Preference number: 6 (lower is better)
Translates to: SIHYKANGSFIA*LGLRMISIQSS
Trigger: GGAACTCTGAATGGAAATCATTCTGAGGCCAAGGCATGCTATGAACGAACCATTAGCTTTGTAGTGGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340329.7
CDS GCA 72 bp GAAGCTGTTCACTGCTTGTATAAATGGTTGCAACAGTaGCTTGGACATCATCTGGCATGGTCTTGTCAATGT +
Preference number: 6 (lower is better)
Translates to: EAVHCLYKWLQQ*LGHHLAWSCQC
Trigger: ACATTGACAAGACCATGCCAGATGATGTCCAAGGCACTGTTGCAACCATTTATACAAGCAGTGAACAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CCA 72 bp ACCAACAATGAATGCATCAGGAATGTTATTAGCTCCTaGAGCCAGAATGTTGGCAATTGGCCACTTTTTGGG +
Preference number: 6 (lower is better)
Translates to: TNNECIRNVISS*SQNVGNWPLFG
Trigger: CCCAAAAAGTGGCCAATTGCCAACATTCTGGCTCCAGGAGCTAATAACATTCCTGATGCATTCATTGTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000493787.6
CDS CCA 72 bp AGCTCCCCGAATTCTCTTCACACCTGGATACAACAATaGGACCATATTAACATAAGCCACACCATGAAACGA +
Preference number: 6 (lower is better)
Translates to: SSPNSLHTWIQQ*DHINISHTMKR
Trigger: TCGTTTCATGGTGTGGCTTATGTTAATATGGTCCCATTGTTGTATCCAGGTGTGAAGAGAATTCGGGGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS CAA 72 bp CAAGAAATGTATGGTCTCCATGAAGATGGTGGTAGTTaGAGAAACACCATAATGAAGGCCGGGATGCAGAAG +
Preference number: 6 (lower is better)
Translates to: QEMYGLHEDGGS*RNTIMKAGMQK
Trigger: CTTCTGCATCCCGGCCTTCATTATGGTGTTTCTCAAACTACCACCATCTTCATGGAGACCATACATTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000495161.5
CDS CAA 72 bp TGCACTGTTCCAAAGTTAATCCTTCCATTTAAATTCTaGGTCCTTTCCCAGGTGTATACCCTGAGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: CTVPKLILPFKF*VLSQVYTLSLP
Trigger: TGGCAGGCTCAGGGTATACACCTGGGAAAGGACCAAGAATTTAAATGGAAGGATTAACTTTGGAACAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CAA 90 bp ACAGAATACTCTAATATCCCACTCCCAGAACCAACACTCCATGTCTaGTCTTCCACCTTTTTGTTACTTAGCCCACTGAAAACTGCTGAC +
Preference number: 6 (lower is better)
Translates to: TEYSNIPLPEPTLHV*SSTFLLLSPLKTAD
Trigger: GTCAGCAGTTTTCAGTGGGCTAAGTAACAAAAAGGTGGAAGACAAGACATGGAGTGTTGGTTCTGGGAGTGGGATATTAGAGTATTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS GCA 72 bp CCTTTGGCTTCTGTGACACCATTGTCTCTGGCTCTTTaGCTCTTTAACAATCCCACTTGTCTCTTTCAATTT +
Preference number: 6 (lower is better)
Translates to: PLASVTPLSLAL*LFNNPTCLFQF
Trigger: AAATTGAAAGAGACAAGTGGGATTGTTAAAGAGGCAAAGAGCCAGAGACAATGGTGTCACAGAAGCCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CAA 72 bp TCTAATATCCCACTCCCAGAACCAACACTCCATGTCTaGTCTTCCACCTTTTTGTTACTTAGCCCACTGAAA +
Preference number: 6 (lower is better)
Translates to: SNIPLPEPTLHV*SSTFLLLSPLK
Trigger: TTTCAGTGGGCTAAGTAACAAAAAGGTGGAAGACAAGACATGGAGTGTTGGTTCTGGGAGTGGGATATTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CAA 90 bp AAGTGGGTGGGACAGCAGACCACCAGTCAAACAGAAAAGGCATGTTaGAAGTGTCACTGTCATTTGGGTATAATATCTGAAAACTCAAAG +
Preference number: 6 (lower is better)
Translates to: KWVGQQTTSQTEKAC*KCHCHLGIISENSK
Trigger: CTTTGAGTTTTCAGATATTATACCCAAATGACAGTGACACTTCAAACATGCCTTTTCTGTTTGACTGGTGGTCTGCTGTCCCACCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CAA 90 bp CACTCAGGCTACTTTCTCACCAGCATACTTTCATCTCAGGCATCCTaGTCCTTCTCCTGCATTTGTCCTGAAAATTCTCAACTTAAAACA +
Preference number: 6 (lower is better)
Translates to: HSGYFLTSILSSQAS*SFSCICPENSQLKT
Trigger: TGTTTTAAGTTGAGAATTTTCAGGACAAATGCAGGAGAAGGACAAGGATGCCTGAGATGAAAGTATGCTGGTGAGAAAGTAGCCTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS GCA 72 bp TTTGTCCAGCTGAATTTCCAACACAATGTATGTCCCTaGTTCTACATATTGCTGTCCTTCAGGATTGTGACT +
Preference number: 6 (lower is better)
Translates to: FVQLNFQHNVCP*FYILLSFRIVT
Trigger: AGTCACAATCCTGAAGGACAGCAATATGTAGAAGCAGGGACATACATTGTGTTGGAAATTCAGCTGGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000493787.6
CDS GCA 72 bp CTTCTGCTTCAAATGCAAAGAGTTGAAGCTGTTCACTaGTTGTATAAATGGTTGCAACAGTGCCTTGGACAT +
Preference number: 6 (lower is better)
Translates to: LLLQMQRVEAVH*LYKWLQQCLGH
Trigger: ATGTCCAAGGCACTGTTGCAACCATTTATACAAGCAGTGAACAGCTTCAACTCTTTGCATTTGAAGCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CCA 72 bp GTAAACATGAAAAGCTCCCCGAATTCTCTTCACACCTaGATACAACAATGGGACCATATTAACATAAGCCAC +
Preference number: 6 (lower is better)
Translates to: VNMKSSPNSLHT*IQQWDHINISH
Trigger: GTGGCTTATGTTAATATGGTCCCATTGTTGTATCCAGGTGTGAAGAGAATTCGGGGAGCTTTTCATGTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310715.7
ENST00000355577.8
CDS CCA 72 bp CCTCCAAGGTTTCACTATCCATATCACTCTCCAGTTTaGCCACCTGTTTTCCAAACATTCTGTAGTATTCAT +
Preference number: 6 (lower is better)
Translates to: PPRFHYPYHSPV*PPVFQTFCSIH
Trigger: ATGAATACTACAGAATGTTTGGAAAACAGGTGGCCAAACTGGAGAGTGATATGGATAGTGAAACCTTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000493787.6
CDS CCA 72 bp TGTATAAATGGTTGCAACAGTGCCTTGGACATCATCTaGCATGGTCTTGTCAATGTCAAGATGTTAGGTAGA +
Preference number: 6 (lower is better)
Translates to: CINGCNSALDII*HGLVNVKMLGR
Trigger: TCTACCTAACATCTTGACATTGACAAGACCATGCCAGATGATGTCCAAGGCACTGTTGCAACCATTTATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CAA 72 bp GGACAGCAGACCACCAGTCAAACAGAAAAGGCATGTTaGAAGTGTCACTGTCATTTGGGTATAATATCTGAA +
Preference number: 6 (lower is better)
Translates to: GQQTTSQTEKAC*KCHCHLGIISE
Trigger: TTCAGATATTATACCCAAATGACAGTGACACTTCAAACATGCCTTTTCTGTTTGACTGGTGGTCTGCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CAA 72 bp TACTTTCTCACCAGCATACTTTCATCTCAGGCATCCTaGTCCTTCTCCTGCATTTGTCCTGAAAATTCTCAA +
Preference number: 6 (lower is better)
Translates to: YFLTSILSSQAS*SFSCICPENSQ
Trigger: TTGAGAATTTTCAGGACAAATGCAGGAGAAGGACAAGGATGCCTGAGATGAAAGTATGCTGGTGAGAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CAA 90 bp TGCCATCTCAAAGTTCTCATTGACTTCTGCTTCAAATGCAAAGAGTaGAAGCTGTTCACTGCTTGTATAAATGGTTGCAACAGTGCCTTG +
Preference number: 6 (lower is better)
Translates to: CHLKVLIDFCFKCKE*KLFTACINGCNSAL
Trigger: CAAGGCACTGTTGCAACCATTTATACAAGCAGTGAACAGCTTCAACTCTTTGCATTTGAAGCAGAAGTCAATGAGAACTTTGAGATGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CAA 90 bp TCCTTCTGGAGAAACAGTAATTTTTGCAGAGTCTCCCAGAACCACTaGATTGAATTCTGCTCGAATAAAGGTAACTGGAGTATCTCCTTT +
Preference number: 6 (lower is better)
Translates to: SFWRNSNFCRVSQNH*IEFCSNKGNWSISF
Trigger: AAAGGAGATACTCCAGTTACCTTTATTCGAGCAGAATTCAATCAAGTGGTTCTGGGAGACTCTGCAAAAATTACTGTTTCTCCAGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS TCA 72 bp TGGATCCCAAGTTTGTGTAGTCAAAATGGGTTCTTGTaGATCAGACTGCAGTTTGGAGGATTCTTCAAGAAA +
Preference number: 6 (lower is better)
Translates to: WIPSLCSQNGFL*IRLQFGGFFKK
Trigger: TTTCTTGAAGAATCCTCCAAACTGCAGTCTGATTCACAAGAACCCATTTTGACTACACAAACTTGGGATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000495161.5
CDS GCA 72 bp CTAGAGCCTATGTTCAAAAGCGAATTCAGTACCATCTaGCTCCCACCAAATTTACTCATAATTGCATTCCAT +
Preference number: 6 (lower is better)
Translates to: LEPMFKSEFSTI*LPPNLLIIAFH
Trigger: ATGGAATGCAATTATGAGTAAATTTGGTGGGAGGCAGATGGTACTGAATTCGCTTTTGAACATAGGCTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CCA 72 bp AAGCTGCCACAAGCTCTTGTGGCATTCAGTCTTAGCTaGAGACCTTTAATACCCTTAGTAATCTATGTATTT +
Preference number: 6 (lower is better)
Translates to: KLPQALVAFSLS*RPLIPLVIYVF
Trigger: AAATACATAGATTACTAAGGGTATTAAAGGTCTCCAGCTAAGACTGAATGCCACAAGAGCTTGTGGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS TCA 72 bp GAAACAGTAATTTTTGCAGAGTCTCCCAGAACCACTTaGTTGAATTCTGCTCGAATAAAGGTAACTGGAGTA +
Preference number: 6 (lower is better)
Translates to: ETVIFAESPRTT*LNSARIKVTGV
Trigger: TACTCCAGTTACCTTTATTCGAGCAGAATTCAATCAAGTGGTTCTGGGAGACTCTGCAAAAATTACTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS GCA 72 bp TTTTGCAGAGTCTCCCAGAACCACTTGATTGAATTCTaGTCGAATAAAGGTAACTGGAGTATCTCCTTTAAA +
Preference number: 6 (lower is better)
Translates to: FCRVSQNHLIEF*SNKGNWSISFK
Trigger: TTTAAAGGAGATACTCCAGTTACCTTTATTCGAGCAGAATTCAATCAAGTGGTTCTGGGAGACTCTGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS CAA 72 bp AGAAACAGTAATTTTTGCAGAGTCTCCCAGAACCACTaGATTGAATTCTGCTCGAATAAAGGTAACTGGAGT +
Preference number: 6 (lower is better)
Translates to: RNSNFCRVSQNH*IEFCSNKGNWS
Trigger: ACTCCAGTTACCTTTATTCGAGCAGAATTCAATCAAGTGGTTCTGGGAGACTCTGCAAAAATTACTGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000340329.7
ENST00000355577.8
ENST00000493787.6
CDS GCA 72 bp AGCATACTTTCATCTCAGGCATCCTTGTCCTTCTCCTaGATTTGTCCTGAAAATTCTCAACTTAAAACAATA +
Preference number: 6 (lower is better)
Translates to: SILSSQASLSFS*ICPENSQLKTI
Trigger: TATTGTTTTAAGTTGAGAATTTTCAGGACAAATGCAGGAGAAGGACAAGGATGCCTGAGATGAAAGTATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CAA 72 bp AAAGTTCTCATTGACTTCTGCTTCAAATGCAAAGAGTaGAAGCTGTTCACTGCTTGTATAAATGGTTGCAAC +
Preference number: 6 (lower is better)
Translates to: KVLIDFCFKCKE*KLFTACINGCN
Trigger: GTTGCAACCATTTATACAAGCAGTGAACAGCTTCAACTCTTTGCATTTGAAGCAGAAGTCAATGAGAACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000433268.5
ENST00000493787.6
CDS CAA 90 bp CAAGTTTGTGTAGTCAAAATGGGTTCTTGTGAATCAGACTGCAGTTaGGAGGATTCTTCAAGAAATTTGTCTAGAATAGATAATGCAGCT +
Preference number: 6 (lower is better)
Translates to: QVCVVKMGSCESDCS*EDSSRNLSRIDNAA
Trigger: AGCTGCATTATCTATTCTAGACAAATTTCTTGAAGAATCCTCCAAACTGCAGTCTGATTCACAAGAACCCATTTTGACTACACAAACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000495161.5
CDS CAA 90 bp TTCTTTCTTTGTTGGTATCTCCTTGATAAATGTGTTAGATGGTTTTaGGCTTATACTTGGATCCCAAGTTTGTGTAGTCAAAATGGGTTC +
Preference number: 6 (lower is better)
Translates to: FFLCWYLLDKCVRWF*AYTWIPSLCSQNGF
Trigger: GAACCCATTTTGACTACACAAACTTGGGATCCAAGTATAAGCCAAAAACCATCTAACACATTTATCAAGGAGATACCAACAAAGAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000495161.5
CDS CCA 72 bp GTTGGTATCTCCTTGATAAATGTGTTAGATGGTTTTTaGCTTATACTTGGATCCCAAGTTTGTGTAGTCAAA +
Preference number: 6 (lower is better)
Translates to: VGISLINVLDGF*LILGSQVCVVK
Trigger: TTTGACTACACAAACTTGGGATCCAAGTATAAGCCAAAAACCATCTAACACATTTATCAAGGAGATACCAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000495161.5
CDS CCA 72 bp TCTGGTGTAATTAGGAATCTCCTGAGTCAGAAGCTATaGTCAAGAAAGAGTCCACAAAATTCTTTAATTAGA +
Preference number: 6 (lower is better)
Translates to: SGVIRNLLSQKL*SRKSPQNSLIR
Trigger: TCTAATTAAAGAATTTTGTGGACTCTTTCTTGACCATAGCTTCTGACTCAGGAGATTCCTAATTACACCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493787.6
CDS CAA 72 bp GTAGTCAAAATGGGTTCTTGTGAATCAGACTGCAGTTaGGAGGATTCTTCAAGAAATTTGTCTAGAATAGAT +
Preference number: 6 (lower is better)
Translates to: VVKMGSCESDCS*EDSSRNLSRID
Trigger: ATCTATTCTAGACAAATTTCTTGAAGAATCCTCCAAACTGCAGTCTGATTCACAAGAACCCATTTTGACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000495161.5
CDS CAA 72 bp TGTTGGTATCTCCTTGATAAATGTGTTAGATGGTTTTaGGCTTATACTTGGATCCCAAGTTTGTGTAGTCAA +
Preference number: 6 (lower is better)
Translates to: CWYLLDKCVRWF*AYTWIPSLCSQ
Trigger: TTGACTACACAAACTTGGGATCCAAGTATAAGCCAAAAACCATCTAACACATTTATCAAGGAGATACCAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000495161.5
CDS TCA 72 bp ACTGATAAATGTCTGAAGTTCCTCCTGGCTTTCAAATaGTGTTGTCTTCAAGTATTTATCTCTCACAATCTT +
Preference number: 6 (lower is better)
Translates to: TDKCLKFLLAFK*CCLQVFISHNL
Trigger: AAGATTGTGAGAGATAAATACTTGAAGACAACATCATTTGAAAGCCAGGAGGAACTTCAGACATTTATCAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000493787.6
CDS CCA 72 bp TTTCTTTGTTGGTATCTCCTTGATAAATGTGTTAGATaGTTTTTGGCTTATACTTGGATCCCAAGTTTGTGT +
Preference number: 6 (lower is better)
Translates to: FLCWYLLDKCVR*FLAYTWIPSLC
Trigger: ACACAAACTTGGGATCCAAGTATAAGCCAAAAACCATCTAACACATTTATCAAGGAGATACCAACAAAGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310715.7
ENST00000355577.8
ENST00000394865.2
ENST00000433268.5
ENST00000462684.5
ENST00000495161.5