RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP65 (Homo sapiens)

Ensembl gene IDs: ENSG00000181378

Ensembl transcript IDs: ENST00000295729.6, ENST00000341552.10, ENST00000409865.7, ENST00000410037.5, ENST00000413871.1, ENST00000436631.5, ENST00000441968.5, ENST00000453220.5, ENST00000457968.5, ENST00000458526.1, ENST00000462848.5, ENST00000463683.1, ENST00000474601.1

Found 724 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGGCAGTCCCACCGCTTCTGAGCCTATCACCGTGTCTCAGCCGGTaGCAGGCCCGGAGTCCTGCTGGCAACCCCAGTTCCACCCTGGCC +
Preference number: 1 (lower is better)
Translates to: RAVPPLLSLSPCLSR*QARSPAGNPSSTLA
Trigger: GGCCAGGGTGGAACTGGGGTTGCCAGCAGGACTCCGGGCCTGTCACCGGCTGAGACACGGTGATAGGCTCAGAAGCGGTGGGACTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR TCA 90 bp CTGCTGGCAACCCCAGTTCCACCCTGGCCTCCACAGCCGTCAATGTaGGGTCCACTCTTCACAGACAGCAAGCAGCCAGGCCACCACGGG +
Preference number: 1 (lower is better)
Translates to: LLATPVPPWPPQPSM*GPLFTDSKQPGHHG
Trigger: CCCGTGGTGGCCTGGCTGCTTGCTGTCTGTGAAGAGTGGACCTCACATTGACGGCTGTGGAGGCCAGGGTGGAACTGGGGTTGCCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR GCA 90 bp TCTGAGCCTATCACCGTGTCTCAGCCGGTGACAGGCCCGGAGTCCTaGTGGCAACCCCAGTTCCACCCTGGCCTCCACAGCCGTCAATGT +
Preference number: 1 (lower is better)
Translates to: SEPITVSQPVTGPES*WQPQFHPGLHSRQC
Trigger: ACATTGACGGCTGTGGAGGCCAGGGTGGAACTGGGGTTGCCAGCAGGACTCCGGGCCTGTCACCGGCTGAGACACGGTGATAGGCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR CCA 90 bp AGAGACCCTCAACTTGCCCCCATTCAGGCCCAGCCTCCACTAAGCTaGGGCTCCGTCAGGCGGGCTCCAGCAACGAGGCAGTGCGTACTA +
Preference number: 1 (lower is better)
Translates to: RDPQLAPIQAQPPLS*GSVRRAPATRQCVL
Trigger: TAGTACGCACTGCCTCGTTGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGGAGGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR TCA 90 bp AGGGCTGGGGACAGCCGGCACTCGGAGTTCCCGACCCAGGGAAGCTaGGTCAGAAGCCCTTTCCATCACAATTATCTGGTGCTGCTGACT +
Preference number: 1 (lower is better)
Translates to: RAGDSRHSEFPTQGS*VRSPFHHNYLVLLT
Trigger: AGTCAGCAGCACCAGATAATTGTGATGGAAAGGGCTTCTGACTCAGCTTCCCTGGGTCGGGAACTCCGAGTGCCGGCTGTCCCCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
3UTR CCA 90 bp ACTAGGAAACAAAGGCACATGGTGGAGGGAGGAAAAGTCCATGCATaGAAGCAGGATGTTTGCTGGGCACAAGTTCTGAGCCTCTGGGGG +
Preference number: 1 (lower is better)
Translates to: TRKQRHMVEGGKVHA*KQDVCWAQVLSLWG
Trigger: CCCCCAGAGGCTCAGAACTTGTGCCCAGCAAACATCCTGCTTCCATGCATGGACTTTTCCTCCCTCCACCATGTGCCTTTGTTTCCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR TCA 90 bp GACTGGACAAATTCAGCTTTGAACCTGGCTCTGTCCATTCATGGCTaGATGGTCTTCGCTGAGTCCTTAACCTTGCTGACCCTCAGCCTC +
Preference number: 1 (lower is better)
Translates to: DWTNSALNLALSIHG*MVFAESLTLLTLSL
Trigger: GAGGCTGAGGGTCAGCAAGGTTAAGGACTCAGCGAAGACCATTCAGCCATGAATGGACAGAGCCAGGTTCAAAGCTGAATTTGTCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR GCA 90 bp CAGGCATCTACAACCTTATTCCTACAAACCTCAACATCACCCCACTaGCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAA +
Preference number: 1 (lower is better)
Translates to: QASTTLFLQTSTSPH*QSIRTGATKASTLE
Trigger: TTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR GCA 90 bp ATGCCCAGTGAATGTGTCTCATTTGTTAAGTTATTAAGGCCACTATaGCCAGGCTCCATCAGGGCAGTCCCACCGCTTCTGAGCCTATCA +
Preference number: 1 (lower is better)
Translates to: MPSECVSFVKLLRPL*PGSIRAVPPLLSLS
Trigger: TGATAGGCTCAGAAGCGGTGGGACTGCCCTGATGGAGCCTGGGCATAGTGGCCTTAATAACTTAACAAATGAGACACATTCACTGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR GCA 90 bp CCAGAAAAACTCTTGTACTTATGTAACTGGACACATATACACGAATaGCAACAGTCCCAAATAGAAACAGCCCAAACTTCCTTCATTCTG +
Preference number: 1 (lower is better)
Translates to: PEKLLYLCNWTHIHE*QQSQIETAQTSFIL
Trigger: CAGAATGAAGGAAGTTTGGGCTGTTTCTATTTGGGACTGTTGGCATTCGTGTATATGTGTCCAGTTACATAAGTACAAGAGTTTTTCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295729.6
3UTR-3UTR TCA 90 bp GGCCCAGCCTCCACTAAGCTGGGGCTCCGTCAGGCGGGCTCCAGCAACGAGGCACAGTCCCACCGCTTCTaGGCCTATCACCGTGTCTCA +
Preference number: 2 (lower is better)
Translates to: GPASTKLGLRQAGSSNEAQSHRF*AYHRVS
Trigger: TGAGACACGGTGATAGGCTCAGAAGCGGTGGGACTG...TGCCTCGTTGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGGAGGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR-3UTR GCA 90 bp TCCCTGTCCTTCCCCACCAGAGACCCTCAACTTGCCCCCATTCAGGCCCAGCCTACAGGCCCGGAGTCCTaGTGGCAACCCCAGTTCCAC +
Preference number: 2 (lower is better)
Translates to: SLSFPTRDPQLAPIQAQPTGPES*WQPQFH
Trigger: GTGGAACTGGGGTTGCCAGCAGGACTCCGGGCCTGT...AGGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTGGTGGGGAAGGACAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR-3UTR CCA 90 bp GGCTCCGTCAGGCGGGCTCCAGCAACGAGGCAGTGCGTACTATGTAGAAGCAACACCCCAGTTCCACCCTaGCCTCCACAGCCGTCAATG +
Preference number: 2 (lower is better)
Translates to: GSVRRAPATRQCVLCRSNTPVPP*PPQPSM
Trigger: CATTGACGGCTGTGGAGGCCAGGGTGGAACTGGGGT...GTTGCTTCTACATAGTACGCACTGCCTCGTTGCTGGAGCCCGCCTGACGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR-3UTR TCA 90 bp ACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGGCAGGACTAACGGATaGGGAGGGGGCACCACGCAT +
Preference number: 2 (lower is better)
Translates to: TSPHCQSIRTGATKASTLGRTNG*GGGTTH
Trigger: ATGCGTGGTGCCCCCTCCTCATCCGTTAGTCCTGCC...CAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR TCA 90 bp TCCCTGTCCTTCCCCACCAGAGACCCTCAACTTGCCCCCATTCAGGCCCAGCCTCCACAGCCGTCAATGTaGGGTCCACTCTTCACAGAC +
Preference number: 2 (lower is better)
Translates to: SLSFPTRDPQLAPIQAQPPQPSM*GPLFTD
Trigger: GTCTGTGAAGAGTGGACCTCACATTGACGGCTGTGG...AGGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTGGTGGGGAAGGACAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR-3UTR TCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTACCGACCCAGGGAAGCTaGGTCAGAAGCCCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVPTQGS*VRSPFH
Trigger: ATGGAAAGGGCTTCTGACTCAGCTTCCCTGGGTCGG...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR GCA 90 bp CCCACCAGAGACCCTCAACTTGCCCCCATTCAGGCCCAGCCTCCACTAAGCTGGTTATTAAGGCCACTATaGCCAGGCTCCATCAGGGCA +
Preference number: 2 (lower is better)
Translates to: PTRDPQLAPIQAQPPLSWLLRPL*PGSIRA
Trigger: TGCCCTGATGGAGCCTGGGCATAGTGGCCTTAATAA...CCAGCTTAGTGGAGGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR-3UTR GCA 90 bp CCCACCAGAGACCCTCAACTTGCCCCCATTCAGGCCCAGCCTCCACTAAGCTGGCCAGCAACGAGGCAGTaGGTACTATGTAGAAGCAAC +
Preference number: 2 (lower is better)
Translates to: PTRDPQLAPIQAQPPLSWPATRQ*VLCRSN
Trigger: GTTGCTTCTACATAGTACGCACTGCCTCGTTGCTGG...CCAGCTTAGTGGAGGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR-3UTR TCA 90 bp CACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAACAGCTTGATCTCAGCTaGGTTCTCCCTTGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: HPTARALGRGQPKPPLWKQLDLS*VLPWRG
Trigger: TCCCCTCCAAGGGAGAACTCAGCTGAGATCAAGCTG...TTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR TCA 90 bp TCCCTGTCCTTCCCCACCAGAGACCCTCAACTTGCCCCCATTCAGGCCCAGCCTGGACAAATTCAGCTTTaGACCTGGCTCTGTCCATTC +
Preference number: 2 (lower is better)
Translates to: SLSFPTRDPQLAPIQAQPGQIQL*TWLCPF
Trigger: GAATGGACAGAGCCAGGTTCAAAGCTGAATTTGTCC...AGGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTGGTGGGGAAGGACAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR-3UTR GCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTATCAACATCACCCCACTaGCAGAGCATTAGGACGGGG +
Preference number: 2 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVSTSPH*QSIRTG
Trigger: CCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTGA...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCAGCTTGATCTCAGCTaGGTTCTCCCTTGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLQLDLS*VLPWRG
Trigger: TCCCCTCCAAGGGAGAACTCAGCTGAGATCAAGCTG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
3UTR-3UTR GCA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTACTAGGCCCAGCTTCCTaGCCGCTCAAAGCTCCTTTA +
Preference number: 2 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLLGPAS*PLKAPL
Trigger: TAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAG...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCGGGAGTATCTCCCTGTaGACCCAGTTTTCCCAAACA +
Preference number: 2 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLGSISL*TQFSQT
Trigger: TGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCC...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
3UTR-3UTR TCA 90 bp GTAAGTGACCCTGATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACTTTTCCCAAACAGCTTaGTCTCAGCTGAGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: VSDPDLDRTALLFSGPQDFSQTA*SQLSSP
Trigger: GGGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAA...GTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATCAGGGTCACTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR CAA 90 bp CCAGCAACGAGGCAGTGCGTACTATGTAGAAGCAACTCAGTCTTCTaGCTGACTAACTGGGGTAGGCAAGGGCTCTGGACTGGACAAATT +
Preference number: 2 (lower is better)
Translates to: PATRQCVLCRSNSVF*LTNWGRQGLWTGQI
Trigger: AATTTGTCCAGTCCAGAGCCCTTGCCTACCCCAGTTAGTCAGCAAGAAGACTGAGTTGCTTCTACATAGTACGCACTGCCTCGTTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR-3UTR TCA 90 bp ACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGAAAGCTCCTTTAGAGTaGCCACTTCTTAATTCAAGG +
Preference number: 2 (lower is better)
Translates to: TSPHCQSIRTGATKASTLKAPLE*PLLNSR
Trigger: CCTTGAATTAAGAAGTGGTCACTCTAAAGGAGCTTT...CAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR CCA 90 bp AAGCCTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGAGCCCTACTTTTCTCTaGGCCCCAAGACCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: KPPQKIGRGPKFRDEKIRSPTFL*APRPWP
Trigger: AGGCCAAGGTCTTGGGGCCCAGAGAAAAGTAGGGCT...CCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR CCA 90 bp GGGTGCATTTTACACTCACGGCACGTCTCAATTGGGACCAGCCACATATTAAAACTCAGTAGCCACGTGTaGCTGTCAGTGGCTGTACTG +
Preference number: 2 (lower is better)
Translates to: GCILHSRHVSIGTSHILKLSSHV*LSVAVL
Trigger: CAGTACAGCCACTGACAGCCACACGTGGCTACTGAG...TTTTAATATGTGGCTGGTCCCAATTGAGACGTGCCGTGAGTGTAAAATGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR GCA 90 bp AAGCCTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGGGGAGTATCTCCCTGTaGACCCAGTTTTCCCAAACA +
Preference number: 2 (lower is better)
Translates to: KPPQKIGRGPKFRDEKIRGSISL*TQFSQT
Trigger: TGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCC...CCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR CCA 90 bp ATTCTTTTCATACTAAGTCTTGAAATCCAGGGTGCATTTTACACTCACGGCACGTCAAGAAGGAAGGGATaGGCAGGACTAACGGATGAG +
Preference number: 2 (lower is better)
Translates to: ILFILSLEIQGAFYTHGTSRRKG*AGLTDE
Trigger: CTCATCCGTTAGTCCTGCCCATCCCTTCCTTCTTGA...CGTGCCGTGAGTGTAAAATGCACCCTGGATTTCAAGACTTAGTATGAAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR CAA 90 bp AATCACGTGAGCCTTCATAGTACCTGGTATTCCCCAGAAAAACTCTaGTACTTATGTAACTGGACACATATACACGAATGCCAACAGTCC +
Preference number: 2 (lower is better)
Translates to: NHVSLHSTWYSPEKL*YLCNWTHIHECQQS
Trigger: GGACTGTTGGCATTCGTGTATATGTGTCCAGTTACATAAGTACAAGAGTTTTTCTGGGGAATACCAGGTACTATGAAGGCTCACGTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295729.6
3UTR-3UTR CCA 90 bp ACTTTGGGAAATAGTTTGGTTTATCTACAGCAAGTGAACAGGTACATGGCCCAAAGCCTTCATAGTACCTaGTATTCCCCAGAAAAACTC +
Preference number: 2 (lower is better)
Translates to: TLGNSLVYLQQVNRYMAQSLHST*YSPEKL
Trigger: GAGTTTTTCTGGGGAATACCAGGTACTATGAAGGCT...TTGGGCCATGTACCTGTTCACTTGCTGTAGATAAACCAAACTATTTCCCAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295729.6
3UTR-3UTR CCA 90 bp AGAGGAAAATATCTTAATGACCTAGGGGTAGAGAAGGACTTCTTAGGAGAAGCATGGATGAATACATTATaGTACAGGCACACATTGGGA +
Preference number: 2 (lower is better)
Translates to: RGKYLNDLGVEKDFLGEAWMNTL*YRHTLG
Trigger: TCCCAATGTGTGCCTGTACCATAATGTATTCATCCA...TGCTTCTCCTAAGAAGTCCTTCTCTACCCCTAGGTCATTAAGATATTTTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
3UTR-3UTR CCA 90 bp AGAGGAAAATATCTTAATGACCTAGGGGTAGAGAAGGACTTCTTAGGAGAAGCAGAAATCCATGCACTTTaGGAAATAGTTTGGTTTATC +
Preference number: 2 (lower is better)
Translates to: RGKYLNDLGVEKDFLGEAEIHAL*EIVWFI
Trigger: GATAAACCAAACTATTTCCCAAAGTGCATGGATTTC...TGCTTCTCCTAAGAAGTCCTTCTCTACCCCTAGGTCATTAAGATATTTTCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
3UTR GCA 72 bp ATCACCGTGTCTCAGCCGGTGACAGGCCCGGAGTCCTaGTGGCAACCCCAGTTCCACCCTGGCCTCCACAGC +
Preference number: 3 (lower is better)
Translates to: ITVSQPVTGPES*WQPQFHPGLHS
Trigger: GCTGTGGAGGCCAGGGTGGAACTGGGGTTGCCAGCAGGACTCCGGGCCTGTCACCGGCTGAGACACGGTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR CCA 72 bp CAACTTGCCCCCATTCAGGCCCAGCCTCCACTAAGCTaGGGCTCCGTCAGGCGGGCTCCAGCAACGAGGCAG +
Preference number: 3 (lower is better)
Translates to: QLAPIQAQPPLS*GSVRRAPATRQ
Trigger: CTGCCTCGTTGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGGAGGCTGGGCCTGAATGGGGGCAAGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR TCA 72 bp TATGCCCAGGCTCCATCAGGGCAGTCCCACCGCTTCTaGGCCTATCACCGTGTCTCAGCCGGTGACAGGCCC +
Preference number: 3 (lower is better)
Translates to: YAQAPSGQSHRF*AYHRVSAGDRP
Trigger: GGGCCTGTCACCGGCTGAGACACGGTGATAGGCTCAGAAGCGGTGGGACTGCCCTGATGGAGCCTGGGCATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR GCA 72 bp CAGGTCCCTGTCCTTCCCCACCAGAGACCCTCAACTTaGCCCCATTCAGGCCCAGCCTCCACTAAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: QVPVLPHQRPST*PHSGPASTKLG
Trigger: CCCCAGCTTAGTGGAGGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTGGTGGGGAAGGACAGGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR TCA 72 bp ACCCCAGTTCCACCCTGGCCTCCACAGCCGTCAATGTaGGGTCCACTCTTCACAGACAGCAAGCAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: TPVPPWPPQPSM*GPLFTDSKQPG
Trigger: GCCTGGCTGCTTGCTGTCTGTGAAGAGTGGACCTCACATTGACGGCTGTGGAGGCCAGGGTGGAACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR TCA 72 bp CCTGGCTCTGTCCATTCATGGCTGAATGGTCTTCGCTaGGTCCTTAACCTTGCTGACCCTCAGCCTCCCTGT +
Preference number: 3 (lower is better)
Translates to: PGSVHSWLNGLR*VLNLADPQPPC
Trigger: ACAGGGAGGCTGAGGGTCAGCAAGGTTAAGGACTCAGCGAAGACCATTCAGCCATGAATGGACAGAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR CCA 72 bp AGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTaGAAAGCCTCCTCAAAAGATCGGACGTGGTCCCAA +
Preference number: 3 (lower is better)
Translates to: RALGRGQPKPPL*KASSKDRTWSQ
Trigger: TTGGGACCACGTCCGATCTTTTGAGGAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR TCA 72 bp GTCCTTAACCTTGCTGACCCTCAGCCTCCCTGTCCATaGAAGAGTCTAGAGAGGAGTTTCCCACAGGATTGG +
Preference number: 3 (lower is better)
Translates to: VLNLADPQPPCP*KSLERSFPQDW
Trigger: CCAATCCTGTGGGAAACTCCTCTCTAGACTCTTTCATGGACAGGGAGGCTGAGGGTCAGCAAGGTTAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR GCA 72 bp ACAGGTACATGGCCCAAGCCTCCGCAATTCTACTCCTaGGTCTATTCCCCAGAAAAGACAGAAGGTGGAGCA +
Preference number: 3 (lower is better)
Translates to: TGTWPKPPQFYS*VYSPEKTEGGA
Trigger: TGCTCCACCTTCTGTCTTTTCTGGGGAATAGACGCAGGAGTAGAATTGCGGAGGCTTGGGCCATGTACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
3UTR GCA 72 bp ACAACCTTATTCCTACAAACCTCAACATCACCCCACTaGCAGAGCATTAGGACGGGGGCAACCAAAGCCTCC +
Preference number: 3 (lower is better)
Translates to: TTLFLQTSTSPH*QSIRTGATKAS
Trigger: GGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTGAGGTTTGTAGGAATAAGGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR CAA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCGTTTTCCCAAACAGCTaGATCTCAGCTGAGTTCTCC +
Preference number: 3 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLVFPNS*ISAEFS
Trigger: GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAAC...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
3UTR-3UTR CAA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTAGTTTTCCCAAACAGCTaGATCTCAGCTGAGTTCTCC +
Preference number: 3 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLVFPNS*ISAEFS
Trigger: GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAAC...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR CAA 90 bp ATTCTTTTCATACTAAGTCTTGAAATCCAGGGTGCATTTTACACTCACGGCACGCTGGGCCCCAAGACCTaGGCCTCTGGGCAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: ILFILSLEIQGAFYTHGTLGPKT*ASGQGQ
Trigger: CTGCCCTTGCCCAGAGGCCAAGGTCTTGGGGCCCAG...CGTGCCGTGAGTGTAAAATGCACCCTGGATTTCAAGACTTAGTATGAAAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR-3UTR CAA 90 bp GGGTGCATTTTACACTCACGGCACGTCTCAATTGGGACCAGCCACATATTAAAACTGGTGCTGCTGACTTaGTCTCTAGGCCCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: GCILHSRHVSIGTSHILKLVLLT*SLGPAS
Trigger: GGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAG...TTTTAATATGTGGCTGGTCCCAATTGAGACGTGCCGTGAGTGTAAAATGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR GCA 72 bp GAATGTGTCTCATTTGTTAAGTTATTAAGGCCACTATaGCCAGGCTCCATCAGGGCAGTCCCACCGCTTCTG +
Preference number: 3 (lower is better)
Translates to: ECVSFVKLLRPL*PGSIRAVPPLL
Trigger: CAGAAGCGGTGGGACTGCCCTGATGGAGCCTGGGCATAGTGGCCTTAATAACTTAACAAATGAGACACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR TCA 72 bp AATTCAGCTTTGAACCTGGCTCTGTCCATTCATGGCTaGATGGTCTTCGCTGAGTCCTTAACCTTGCTGACC +
Preference number: 3 (lower is better)
Translates to: NSALNLALSIHG*MVFAESLTLLT
Trigger: GGTCAGCAAGGTTAAGGACTCAGCGAAGACCATTCAGCCATGAATGGACAGAGCCAGGTTCAAAGCTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
3UTR GCA 72 bp CTCTTGTACTTATGTAACTGGACACATATACACGAATaGCAACAGTCCCAAATAGAAACAGCCCAAACTTCC +
Preference number: 3 (lower is better)
Translates to: LLYLCNWTHIHE*QQSQIETAQTS
Trigger: GGAAGTTTGGGCTGTTTCTATTTGGGACTGTTGGCATTCGTGTATATGTGTCCAGTTACATAAGTACAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR GCA 90 bp CCCATTCAGGCCCAGCCTCCACTAAGCTGGGGCTCCGTCAGGCGGGCTCCAGCAGGGGGATCTGGCTCATaGTGTGCCGGGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: PIQAQPPLSWGSVRRAPAGGSGS*CAGWAP
Trigger: AGGTGCCCACCCGGCACAGCATGAGCCAGATCCCCC...TGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGGAGGCTGGGCCTGAATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp ACTTGCCCCCATTCAGGCCCAGCCTCCACTAAGCTGGGGCTCCGTCAGGCGGGCCAGCCTCCACTAAGCTaGGGCTCCGTCAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: TCPHSGPASTKLGLRQAGQPPLS*GSVRRA
Trigger: AGCCCGCCTGACGGAGCCCCAGCTTAGTGGAGGCTG...GCCCGCCTGACGGAGCCCCAGCTTAGTGGAGGCTGGGCCTGAATGGGGGCAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR TCA 90 bp GGCCCAGCCTCCACTAAGCTGGGGCTCCGTCAGGCGGGCTCCAGCAACGAGGCAGCTGGGCACAAGTTCTaGGCCTCTGGGGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GPASTKLGLRQAGSSNEAAGHKF*ASGGEK
Trigger: CTTTTCTCCCCCAGAGGCTCAGAACTTGTGCCCAGC...TGCCTCGTTGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGGAGGCTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR GCA 90 bp CCCATTCAGGCCCAGCCTCCACTAAGCTGGGGCTCCGTCAGGCGGGCTCCAGCACAGAGACCCTCAACTTaGCCCCATTCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PIQAQPPLSWGSVRRAPAQRPST*PHSGPA
Trigger: GGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTG...TGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGGAGGCTGGGCCTGAATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp CCACTAAGCTGGGGCTCCGTCAGGCGGGCTCCAGCAACGAGGCAGTGCGTACTAGGCCCGGAGTCCTGCTaGCAACCCCAGTTCCACCCT +
Preference number: 4 (lower is better)
Translates to: PLSWGSVRRAPATRQCVLGPESC*QPQFHP
Trigger: AGGGTGGAACTGGGGTTGCCAGCAGGACTCCGGGCC...TAGTACGCACTGCCTCGTTGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR TCA 90 bp CCACTAAGCTGGGGCTCCGTCAGGCGGGCTCCAGCAACGAGGCAGTGCGTACTACGGAAGGTGGGGCCTTaGATGGTGCGGCCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: PLSWGSVRRAPATRQCVLRKVGP*MVRPRN
Trigger: ATTTCGGGGCCGCACCATTCAAGGCCCCACCTTCCG...TAGTACGCACTGCCTCGTTGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR GCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTATGCTCCTCTGCCGGCTaGCCGCCCCGTACCAGCACG +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVCSSAG*PPRTST
Trigger: CGTGCTGGTACGGGGCGGGCAGCCGGCAGAGGAGCA...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp CTCCATCAGGGCAGTCCCACCGCTTCTGAGCCTATCACCGTGTCTCAGCCGGTGACAGGCCCGGAGTCCTaGTGGCAACCCCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LHQGSPTASEPITVSQPVTGPES*WQPQFH
Trigger: GTGGAACTGGGGTTGCCAGCAGGACTCCGGGCCTGT...CACCGGCTGAGACACGGTGATAGGCTCAGAAGCGGTGGGACTGCCCTGATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp GGCAGTCCCACCGCTTCTGAGCCTATCACCGTGTCTCAGCCGGTGACAGGCCCGGTAAAGCGCAGGTCCTaGCATGCAGCAGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSPTASEPITVSQPVTGPVKRRS*HAADAQ
Trigger: CTGGGCATCTGCTGCATGCCAGGACCTGCGCTTTAC...CGGGCCTGTCACCGGCTGAGACACGGTGATAGGCTCAGAAGCGGTGGGACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR TCA 90 bp CCCACCAGAGACCCTCAACTTGCCCCCATTCAGGCCCAGCCTCCACTAAGCTGGACAGGTGCTTCCGGGTaGTACCCTCAGCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: PTRDPQLAPIQAQPPLSWTGASG*YPQHCP
Trigger: TGGGCAGTGCTGAGGGTATCACCCGGAAGCACCTGT...CCAGCTTAGTGGAGGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR TCA 90 bp GGCAGTCCCACCGCTTCTGAGCCTATCACCGTGTCTCAGCCGGTGACAGGCCCGCCACAGCCGTCAATGTaGGGTCCACTCTTCACAGAC +
Preference number: 4 (lower is better)
Translates to: GSPTASEPITVSQPVTGPPQPSM*GPLFTD
Trigger: GTCTGTGAAGAGTGGACCTCACATTGACGGCTGTGG...CGGGCCTGTCACCGGCTGAGACACGGTGATAGGCTCAGAAGCGGTGGGACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR GCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGATGCTCCTCTGCCGGCTaGCCGCCCCGTACCAGCACG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRCSSAG*PPRTST
Trigger: CGTGCTGGTACGGGGCGGGCAGCCGGCAGAGGAGCA...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCTGCTCCTCTGCCGGCTaGCCGCCCCGTACCAGCACG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLCSSAG*PPRTST
Trigger: CGTGCTGGTACGGGGCGGGCAGCCGGCAGAGGAGCA...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCTGAGAGGCCTGGCCTaGCTCCAGGAGCCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLLRGLA*LQEPRG
Trigger: GCCACGGGGCTCCTGGAGCCAGGCCAGGCCTCTCAG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCTGGATGCTGCTCCTCTaGCGGCTGCCCGCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLWMLLL*RLPAPY
Trigger: GTACGGGGCGGGCAGCCGGCAGAGGAGCAGCATCCA...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCCTGCAGCTGGATGCTaGTCCTCTGCCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLPAAGC*SSAGCP
Trigger: CGGGCAGCCGGCAGAGGAGCAGCATCCAGCTGCAGG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACCTGCAGCTGGATGCTaGTCCTCTGCCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRPAAGC*SSAGCP
Trigger: CGGGCAGCCGGCAGAGGAGCAGCATCCAGCTGCAGG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp TCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAACTCCCGGAAGCACGATaGCATGGGCCGTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: SPHCQSIRTGATKASTLELPEAR*HGPWGM
Trigger: CATGCCCCACGGCCCATGGCATCGTGCTTCCGGGAG...TTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp ACTTGCCCCCATTCAGGCCCAGCCTCCACTAAGCTGGGGCTCCGTCAGGCGGGCTGGAAGCAGGATGTTTaGTGGGCACAAGTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TCPHSGPASTKLGLRQAGWKQDV*WAQVLS
Trigger: GCTCAGAACTTGTGCCCAGCAAACATCCTGCTTCCA...GCCCGCCTGACGGAGCCCCAGCTTAGTGGAGGCTGGGCCTGAATGGGGGCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAGCAGCTGGGCGCACTTaGCCACAGCCTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVAAGRT*PQPAAG
Trigger: TCCAGCTGCAGGCTGTGGCCAAGTGCGCCCAGCTGC...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp GTAAGTGACCCTGATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACCCCAGGGGAGGCCCCTaGGGTCACCGGTACCTCTAC +
Preference number: 4 (lower is better)
Translates to: VSDPDLDRTALLFSGPQDPRGGP*GHRYLY
Trigger: GTAGAGGTACCGGTGACCCCAGGGGCCTCCCCTGGG...GTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATCAGGGTCACTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp ACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGCAGGCTGAGGCAAGGTaGCCCCGCCTCCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TSPHCQSIRTGATKASTLQAEAR*PRLLGA
Trigger: TGCTCCTAGGAGGCGGGGCCACCTTGCCTCAGCCTG...CAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp GATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACCTTGGCCTCTGGTGGAGAACTCCCAGGTaGAGAAGGTGGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: DLDRTALLFSGPQDLGLWWRTPR*RRWAGP
Trigger: GGGACCTGCCCACCTTCTTCACCTGGGAGTTCTCCA...CCAGAGGCCAAGGTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTGGTCCTGGTGGTGGATaGGACAGGCCACACGCCGAA +
Preference number: 4 (lower is better)
Translates to: QHHPTARALGRGQPKPPLGPGGG*DRPHAE
Trigger: TTCGGCGTGTGGCCTGTCTCATCCACCACCAGGACC...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCGCATGGCCATGGACTTaGGTGGGGGCACGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLAWPWT*VGARRS
Trigger: GCTGCGACGTGCCCCCACTCAAGTCCATGGCCATGC...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp TCCCTGTCCTTCCCCACCAGAGACCCTCAACTTGCCCCCATTCAGGCCCAGCCTCACTGCCCATGGAGCTaGCATCCAGGATGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SLSFPTRDPQLAPIQAQPHCPWS*HPGWKA
Trigger: TGCTTTCCATCCTGGATGTCAGCTCCATGGGCAGTG...AGGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTGGTGGGGAAGGACAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR TCA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTGGCAGGACTAACGGATaGGGAGGGGGCACCACGCAT +
Preference number: 4 (lower is better)
Translates to: QHHPTARALGRGQPKPPLGRTNG*GGGTTH
Trigger: ATGCGTGGTGCCCCCTCCTCATCCGTTAGTCCTGCC...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CCCCAGTTCCACCCTGGCCTCCACAGCCGTCAATGTGAGGTCCACTCTTCACAGCAGTCCCACCGCTTCTaGGCCTATCACCGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: PQFHPGLHSRQCEVHSSQQSHRF*AYHRVS
Trigger: TGAGACACGGTGATAGGCTCAGAAGCGGTGGGACTG...CTGTGAAGAGTGGACCTCACATTGACGGCTGTGGAGGCCAGGGTGGAACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCAGCCTGCAGCTGGATaGTGCTCCTCTGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLQPAAG*CSSAGC
Trigger: GCAGCCGGCAGAGGAGCAGCATCCAGCTGCAGGCTG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACTCCCGGAAGCACGATaGCATGGGCCGTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRLPEAR*HGPWGM
Trigger: CATGCCCCACGGCCCATGGCATCGTGCTTCCGGGAG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGGGTCATACGGGCCTTaGCCACCAGCGTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: HPTARALGRGQPKPPLWKGSYGP*PPASQR
Trigger: CCTTTGGGACGCTGGTGGGCAAGGCCCGTATGACCC...TTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTACCCTCGGTCACTTCCTaGCACCCCACCAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVPSVTS*HPTKPL
Trigger: GAGTGGCTTGGTGGGGTGGCAGGAAGTGACCGAGGG...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp CCACTAAGCTGGGGCTCCGTCAGGCGGGCTCCAGCAACGAGGCAGTGCGTACTACCACGGGCAAGAGAGTaGAGCTCTTGTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PLSWGSVRRAPATRQCVLPRARE*SSCSPS
Trigger: TGAAGGAGAACAAGAGCTGCACTCTCTTGCCCGTGG...TAGTACGCACTGCCTCGTTGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp TCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAATGGAGCTTGCGGGCTaGGCGCTGATGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPHCQSIRTGATKASTLEMELAG*ALMVLQ
Trigger: CTGCAGCACCATCAGCGCCCAGCCCGCAAGCTCCAT...TTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGGGCAGCTGCAGGGATaGTGGGCGGCAGATCAGCCT +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRGQLQG*WAADQP
Trigger: AGGCTGATCTGCCGCCCACCATCCCTGCAGCTGCCC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409865.7
ENST00000410037.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCTGAGAGGCCTGGCCTaGCTCCAGGAGCCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAELRGLA*LQEPRG
Trigger: GCCACGGGGCTCCTGGAGCCAGGCCAGGCCTCTCAG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGCCACAGCCTGCAGCTaGATGCTGCTCCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRATACS*MLLLCR
Trigger: CCGGCAGAGGAGCAGCATCCAGCTGCAGGCTGTGGC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCGCAGCTGGGCGCACTTaGCCACAGCCTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLAAGRT*PQPAAG
Trigger: TCCAGCTGCAGGCTGTGGCCAAGTGCGCCCAGCTGC...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGCCTCAAGCCCTCGGCATCCTaGTCCTCCGGGCACTTGTGC +
Preference number: 4 (lower is better)
Translates to: HCQSIRTGATKASTLESLKPSAS*SSGHLC
Trigger: GCACAAGTGCCCGGAGGACCAGGATGCCGAGGGCTT...GAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGGCCATGGACTTGAGTaGGGGCACGTCGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: HPTARALGRGQPKPPLWKGHGLE*GHVAAL
Trigger: GAGAGCTGCGACGTGCCCCCACTCAAGTCCATGGCC...TTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp TCCCTGTCCTTCCCCACCAGAGACCCTCAACTTGCCCCCATTCAGGCCCAGCCTAGGTGGGGCCTTGAATaGTGCGGCCCCGAAATTGAA +
Preference number: 4 (lower is better)
Translates to: SLSFPTRDPQLAPIQAQPRWGLE*CGPEIE
Trigger: TTCAATTTCGGGGCCGCACCATTCAAGGCCCCACCT...AGGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTGGTGGGGAAGGACAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp CACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGCCTCCTGGCACGCAGAGGATaGAGCCTGAAGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: HCQSIRTGATKASTLESLLARRG*SLKLPS
Trigger: CGAGGGCAGCTTCAGGCTCCATCCTCTGCGTGCCAG...GAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTACCAGAACAGCAGGGCTaGGGACAGCCGGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLPEQQG*GQPALG
Trigger: TCCGAGTGCCGGCTGTCCCCAGCCCTGCTGTTCTGG...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp GGCAGTCCCACCGCTTCTGAGCCTATCACCGTGTCTCAGCCGGTGACAGGCCCGAAGCAGGATGTTTGCTaGGCACAAGTTCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GSPTASEPITVSQPVTGPKQDVC*AQVLSL
Trigger: GAGGCTCAGAACTTGTGCCCAGCAAACATCCTGCTT...CGGGCCTGTCACCGGCTGAGACACGGTGATAGGCTCAGAAGCGGTGGGACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp TCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAACAGGCCCAGAGCCCTaGCAGCCTGAGCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: SPHCQSIRTGATKASTLETGPEP*QPEQNS
Trigger: GGAGTTCTGCTCAGGCTGCCAGGGCTCTGGGCCTGT...TTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGCCTCCACGCCGAAAGCAGATaGTGGGGTGAGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HCQSIRTGATKASTLESLHAESR*WGEWAG
Trigger: TCCAGCCCACTCACCCCATCATCTGCTTTCGGCGTG...GAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGGTCCTGGTGGTGGATaGGACAGGCCACACGCCGAA +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRGPGGG*DRPHAE
Trigger: TTCGGCGTGTGGCCTGTCTCATCCACCACCAGGACC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTATACCAGGTGAGGTGCTaGGGCTTCAGGATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVYQVRC*GFRMAG
Trigger: GCCAGCCATCCTGAAGCCTCAGCACCTCACCTGGTA...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGCCTCGTGTGCGGTACCAGGTaGGGTGCTGAGGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: HCQSIRTGATKASTLESLVCGTR*GAEASG
Trigger: TCCTGAAGCCTCAGCACCTCACCTGGTACCGCACAC...GAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CAGACAGCAAGCAGCCAGGCCACCACGGGCAAGAGAGTGCAGCTCTTGTTCTCCGTGCGGCCCCGAAATTaGAGTCAAGCCTTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: QTASSQATTGKRVQLLFSVRPRN*SQALKG
Trigger: CCCCTTTAAGGCTTGACTTCAATTTCGGGGCCGCAC...GGAGAACAAGAGCTGCACTCTCTTGCCCGTGGTGGCCTGGCTGCTTGCTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCGGCAGGACTAACGGATaGGGAGGGGGCACCACGCAT +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLGRTNG*GGGTTH
Trigger: ATGCGTGGTGCCCCCTCCTCATCCGTTAGTCCTGCC...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GGCTCTGGACTGGACAAATTCAGCTTTGAACCTGGCTCTGTCCATTCATGGCTGCCGTGTCTCAGCCGGTaGCAGGCCCGGAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GSGLDKFSFEPGSVHSWLPCLSR*QARSPA
Trigger: AGCAGGACTCCGGGCCTGTCACCGGCTGAGACACGG...CAGCCATGAATGGACAGAGCCAGGTTCAAAGCTGAATTTGTCCAGTCCAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR TCA 90 bp TCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAACCAGGTAGTCACGGATaGTTCCCCACAGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SPHCQSIRTGATKASTLEPGSHG*FPTGPP
Trigger: TGGTGGCCCTGTGGGGAATCATCCGTGACTACCTGG...TTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTAGAGCCCTGGCAGCCTaGGCAGAACTCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: QHHPTARALGRGQPKPPLRALAA*AELQHH
Trigger: GTGATGCTGGAGTTCTGCTCAGGCTGCCAGGGCTCT...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTGGATGCTGCTCCTCTaGCGGCTGCCCGCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEWMLLL*RLPAPY
Trigger: GTACGGGGCGGGCAGCCGGCAGAGGAGCAGCATCCA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAACACTTGGCCACAGCCTaGAGCTGGATGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: HPTARALGRGQPKPPLWKHLATA*SWMLLL
Trigger: GAGGAGCAGCATCCAGCTGCAGGCTGTGGCCAAGTG...TTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTATCAATCCACAGGGGCTaGTCGGAGCGCTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLSIHRG*SERSPR
Trigger: CCTTGGGGAGCGCTCCGAGCAGCCCCTGTGGATTGA...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGGATGGCTGGCTTGGTaGTGTCCGAGTGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRGWLAW*CPSGRS
Trigger: GGACCTGCCACTCGGACAGCACCAAGCCAGCCATCC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCCCTCGGTCACTTCCTaGCACCCCACCAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLPSVTS*HPTKPL
Trigger: GAGTGGCTTGGTGGGGTGGCAGGAAGTGACCGAGGG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAATGGAGCTTGCGGGCTaGGCGCTGATGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRMELAG*ALMVLQ
Trigger: CTGCAGCACCATCAGCGCCCAGCCCGCAAGCTCCAT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGCATCTGAGTGTCCATaGAGCTTGCGGGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRASECP*SLRAGR
Trigger: GCGCCCAGCCCGCAAGCTCCATGGACACTCAGATGC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACAGCTGCAGGGATGGTaGGCGGCAGATCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRQLQGW*AADQPV
Trigger: CACAGGCTGATCTGCCGCCCACCATCCCTGCAGCTG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409865.7
ENST00000410037.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCTGAGAGGCCTGGCCTaGCTCCAGGAGCCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSLRGLA*LQEPRG
Trigger: GCCACGGGGCTCCTGGAGCCAGGCCAGGCCTCTCAG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAATGCTCACCAGCAGCTaGGCGCACTTGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRMLTSS*AHLATA
Trigger: GGCTGTGGCCAAGTGCGCCCAGCTGCTGGTGAGCAT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAAAGCCCTCGGCATCCTaGTCCTCCGGGCACTTGTGC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRKPSAS*SSGHLC
Trigger: GCACAAGTGCCCGGAGGACCAGGATGCCGAGGGCTT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACGATGCCATGGGCCGTaGGGCATGAGAAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRRCHGP*GMRRPG
Trigger: ACCAGGCCTTCTCATGCCCCACGGCCCATGGCATCG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCGATGCCATGGGCCGTaGGGCATGAGAAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLRCHGP*GMRRPG
Trigger: ACCAGGCCTTCTCATGCCCCACGGCCCATGGCATCG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACCTTGGCCTCTGGCAGTCGATGGCAAACTaGAAGTGGGCCGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: DLDRTALLFSGPQDLGLWQSMAN*KWAVQS
Trigger: GGACTGCACGGCCCACTTCCAGTTTGCCATCGACTG...CCAGAGGCCAAGGTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp ACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGTTGGTGCTGTCCGAGTaGCAGGTCCCCATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TSPHCQSIRTGATKASTLLVLSE*QVPIRS
Trigger: GGACCTGATGGGGACCTGCCACTCGGACAGCACCAA...CAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTATCAGGATGGCTGGCTTaGTGCTGTCCGAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVSGWLA*CCPSGR
Trigger: CCTGCCACTCGGACAGCACCAAGCCAGCCATCCTGA...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAGCTGAGGCTTCAGGATaGCTGGCTTGGTGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVAEASG*LAWCCP
Trigger: CGGACAGCACCAAGCCAGCCATCCTGAAGCCTCAGC...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGGGGGCCTCAGGCCCTaGGCAGGCACCGAAGTCTAC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEGGLRP*AGTEVY
Trigger: GTAGACTTCGGTGCCTGCCCAGGGCCTGAGGCCCCC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTACACGTCGCAGCTCTCTaGAGTCACCCAGAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVHVAAL*SHPEGA
Trigger: TGCCCCTTCTGGGTGACTCCAGAGAGCTGCGACGTG...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGGCCATGGACTTGAGTaGGGGCACGTCGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRGHGLE*GHVAAL
Trigger: GAGAGCTGCGACGTGCCCCCACTCAAGTCCATGGCC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACTGGCACGCAGAGGATaGAGCCTGAAGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRLARRG*SLKLPS
Trigger: CGAGGGCAGCTTCAGGCTCCATCCTCTGCGTGCCAG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AATGTGAGGTCCACTCTTCACAGACAGCAAGCAGCCAGGCCACCACGGGCAAGAACCCCAGTTCCACCCTaGCCTCCACAGCCGTCAATG +
Preference number: 4 (lower is better)
Translates to: NVRSTLHRQQAARPPRARTPVPP*PPQPSM
Trigger: CATTGACGGCTGTGGAGGCCAGGGTGGAACTGGGGT...TCTTGCCCGTGGTGGCCTGGCTGCTTGCTGTCTGTGAAGAGTGGACCTCACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAAGACGATGGGGAGCGTaGGGGTTATGCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRRRWGA*GLCLGS
Trigger: TGAGCCCAGGCATAACCCTCACGCTCCCCATCGTCT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAACGGGTTGTGTAGCCTaGTCTGCCTCTCCGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRTGCVA*SASPRC
Trigger: GCACCTCGGAGAGGCAGATCAGGCTACACAACCCGT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCACGGGTTGTGTAGCCTaGTCTGCCTCTCCGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLTGCVA*SASPRC
Trigger: GCACCTCGGAGAGGCAGATCAGGCTACACAACCCGT...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAAAGCAGATGATGGGGTaGGTGGGCTGGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVKQMMG*VGWKAQ
Trigger: CTGTGCCTTCCAGCCCACTCACCCCATCATCTGCTT...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACACGCCGAAAGCAGATaGTGGGGTGAGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRHAESR*WGEWAG
Trigger: TCCAGCCCACTCACCCCATCATCTGCTTTCGGCGTG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCGTGTGCGGTACCAGGTaGGGTGCTGAGGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLVCGTR*GAEASG
Trigger: TCCTGAAGCCTCAGCACCTCACCTGGTACCGCACAC...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGCGTCCAGACCACCATaGTCTTGCCCTTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: HPTARALGRGQPKPPLWKASRPP*SCPWCG
Trigger: ACCACACCAAGGGCAAGATCATGGTGGTCTGGACGC...TTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGCATGGCCATGGACTTaGGTGGGGGCACGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEAWPWT*VGARRS
Trigger: GCTGCGACGTGCCCCCACTCAAGTCCATGGCCATGC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTCCGACCCAGGGAAGCTaGGTCAGAAGCCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QHHPTARALGRGQPKPPLPTQGS*VRSPFH
Trigger: ATGGAAAGGGCTTCTGACTCAGCTTCCCTGGGTCGG...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCAGGGATGGCCACTGTaGTGGCACTCAGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLQGWPL*WHSGRI
Trigger: GATCCTGCCTGAGTGCCAGCACAGTGGCCATCCCTG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCCTGCAGCTGGATGCTaGTCCTCTGCCGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSPAAGC*SSAGCP
Trigger: CGGGCAGCCGGCAGAGGAGCAGCATCCAGCTGCAGG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCAGCCTGCAGCTGGATaGTGCTCCTCTGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEQPAAG*CSSAGC
Trigger: GCAGCCGGCAGAGGAGCAGCATCCAGCTGCAGGCTG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGCCTCGGCACTTGTGCTTTATaGTCACCAGCAGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: HCQSIRTGATKASTLESLGTCAL*SPAAGR
Trigger: GCGCCCAGCTGCTGGTGAGCATAAAGCACAAGTGCC...GAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTATTGTGTAGCCTGATCTaGCTCTCCGAGGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVLCSLI*LSEVQP
Trigger: GGGCTGCACCTCGGAGAGGCAGATCAGGCTACACAA...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGGCTGGAAGGCACAGTaGAGGGTCATACGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRGWKAQ*RVIRAL
Trigger: CAAGGCCCGTATGACCCTGCACTGTGCCTTCCAGCC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTAGGATGGCCACTGTGCTaGCACTCAGGCAGGATCCAC +
Preference number: 4 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLGWPLC*HSGRIH
Trigger: GTGGATCCTGCCTGAGTGCCAGCACAGTGGCCATCC...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAACGTGAGGGTTATGCCTaGGCTCAGGAAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: HPTARALGRGQPKPPLWKREGYA*AQEDGL
Trigger: CAGCCCATCTTCCTGAGCCCAGGCATAACCCTCACG...TTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTGTGGCAGGGCAGGGTaGCCCGTAGGCCGACACAGA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAECGRAG*PVGRHR
Trigger: TCTGTGTCGGCCTACGGGCCACCCTGCCCTGCCACA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409865.7
ENST00000410037.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGGGCAGCTGCAGGGATaGTGGGCGGCAGATCAGCCT +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEGQLQG*WAADQP
Trigger: AGGCTGATCTGCCGCCCACCATCCCTGCAGCTGCCC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409865.7
ENST00000410037.5
CDS-3UTR CCA 90 bp ACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGGGCAGCATCTGGAATaGGCTGGAGAACTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TSPHCQSIRTGATKASTLGQHLE*AGELPG
Trigger: ACCTGGGAGTTCTCCAGCCCATTCCAGATGCTGCCC...CAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGTGGCGGGCAGCATCTaGAATGGGCTGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRVAGSI*NGLENS
Trigger: GGAGTTCTCCAGCCCATTCCAGATGCTGCCCGCCAC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGCTCCAGGAGCCCCGTaGCGGGCAGCATCTGGAATG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEAPGAP*RAASGM
Trigger: CATTCCAGATGCTGCCCGCCACGGGGCTCCTGGAGC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGCCACAGCCTGCAGCTaGATGCTGCTCCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEATACS*MLLLCR
Trigger: CCGGCAGAGGAGCAGCATCCAGCTGCAGGCTGTGGC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTGCCGTGCAGTCCGATTaGTTCTCAATCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: QHHPTARALGRGQPKPPLAVQSD*FSIHRG
Trigger: GCCCCTGTGGATTGAGAACCAATCGGACTGCACGGC...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAAGTGGGTCCTGGTGGTaGATGAGACAGGCCACACGC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRSGSWW*MRQATR
Trigger: GCGTGTGGCCTGTCTCATCCACCACCAGGACCCACT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp ACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGAGGAACAGTGGGTCCTaGTGGTGGATGAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: TSPHCQSIRTGATKASTLRNSGS*WWMRQA
Trigger: GGCCTGTCTCATCCACCACCAGGACCCACTGTTCCT...CAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGCCTCCAGGTCCAGGAACAGTaGGTCCTGGTGGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: HCQSIRTGATKASTLESLQVQEQ*VLVVDE
Trigger: CTCATCCACCACCAGGACCCACTGTTCCTGGACCTG...GAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGATTGGTGCTGTCCGAGTaGCAGGTCCCCATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRLVLSE*QVPIRS
Trigger: GGACCTGATGGGGACCTGCCACTCGGACAGCACCAA...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCTCAGGATGGCTGGCTTaGTGCTGTCCGAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLSGWLA*CCPSGR
Trigger: CCTGCCACTCGGACAGCACCAAGCCAGCCATCCTGA...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGCCTCAGGCTTCAGGATGGCTaGCTTGGTGCTGTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: HCQSIRTGATKASTLESLRLQDG*LGAVRV
Trigger: CACTCGGACAGCACCAAGCCAGCCATCCTGAAGCCT...GAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCGCTGAGGCTTCAGGATaGCTGGCTTGGTGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLAEASG*LAWCCP
Trigger: CGGACAGCACCAAGCCAGCCATCCTGAAGCCTCAGC...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACCTTGGCCTCTGGATGAGAGCCCCGTTCTaGTCCTGTGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DLDRTALLFSGPQDLGLWMRAPF*SCASFF
Trigger: GAAGAAGCTGGCACAGGACCAGAACGGGGCTCTCAT...CCAGAGGCCAAGGTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGGGGGCCTCAGGCCCTaGGCAGGCACCGAAGTCTAC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSGGLRP*AGTEVY
Trigger: GTAGACTTCGGTGCCTGCCCAGGGCCTGAGGCCCCC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCACGTCGCAGCTCTCTaGAGTCACCCAGAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLHVAAL*SHPEGA
Trigger: TGCCCCTTCTGGGTGACTCCAGAGAGCTGCGACGTG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCCAGAACAGCAGGGCTaGGGACAGCCGGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEPEQQG*GQPALG
Trigger: TCCGAGTGCCGGCTGTCCCCAGCCCTGCTGTTCTGG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAATCCACTGAAGGGAGGTaGTACTCTCAGGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SPHCQSIRTGATKASTLESTEGR*YSQGQA
Trigger: AGCCTGGCCCTGAGAGTACCACCTCCCTTCAGTGGA...TTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAGCTTGGAGCCTGGGTaGGCATCATGTCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLSLEPG*ASCPWD
Trigger: GTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCT...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTAAGCTTGGAGCCTGGGTaGGCATCATGTCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLSLEPG*ASCPWD
Trigger: GTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCT...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCGCTGAAAGGTCACCTTaGTCTGAGAGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLAERSP*SERPGL
Trigger: CAGGCCAGGCCTCTCAGATCAAGGTGACCTTTCAGC...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGCTGAAAGGTCACCTTaGTCTGAGAGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRAERSP*SERPGL
Trigger: CAGGCCAGGCCTCTCAGATCAAGGTGACCTTTCAGC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAAAGCAGATGATGGGGTaGGTGGGCTGGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRKQMMG*VGWKAQ
Trigger: CTGTGCCTTCCAGCCCACTCACCCCATCATCTGCTT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGGTCCTGGTGGTGGATaGGACAGGCCACACGCCGAA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEGPGGG*DRPHAE
Trigger: TTCGGCGTGTGGCCTGTCTCATCCACCACCAGGACC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCCTGGATGGGAATCATaGGAGCCCCGTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLPGWES*EPRSGP
Trigger: AGGACCAGAACGGGGCTCTCATGATTCCCATCCAGG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACCTGGATGGGAATCATaGGAGCCCCGTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRPGWES*EPRSGP
Trigger: AGGACCAGAACGGGGCTCTCATGATTCCCATCCAGG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGCGTCCAGACCACCATaGTCTTGCCCTTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRASRPP*SCPWCG
Trigger: ACCACACCAAGGGCAAGATCATGGTGGTCTGGACGC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACCGACCCAGGGAAGCTaGGTCAGAAGCCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRPTQGS*VRSPFH
Trigger: ATGGAAAGGGCTTCTGACTCAGCTTCCCTGGGTCGG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGGCAGGACTAACGGATaGGGAGGGGGCACCACGCAT +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEGRTNG*GGGTTH
Trigger: ATGCGTGGTGCCCCCTCCTCATCCGTTAGTCCTGCC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCGCAGGCACTCATGGCTaGACTGCTGTCGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLAGTHG*TAVVDG
Trigger: GCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGC...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTAGCAGGCACTCATGGCTaGACTGCTGTCGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLAGTHG*TAVVDG
Trigger: GCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGC...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCAGCCTGCAGCTGGATaGTGCTCCTCTGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSQPAAG*CSSAGC
Trigger: GCAGCCGGCAGAGGAGCAGCATCCAGCTGCAGGCTG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGGCACTTGTGCTTTATaGTCACCAGCAGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRGTCAL*SPAAGR
Trigger: GCGCCCAGCTGCTGGTGAGCATAAAGCACAAGTGCC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTCAATCCACAGGGGCTaGTCGGAGCGCTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAESIHRG*SERSPR
Trigger: CCTTGGGGAGCGCTCCGAGCAGCCCCTGTGGATTGA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGGATGGCTGGCTTGGTaGTGTCCGAGTGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEGWLAW*CPSGRS
Trigger: GGACCTGCCACTCGGACAGCACCAAGCCAGCCATCC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AAGTTATTAAGGCCACTATGCCCAGGCTCCATCAGGGCAGTCCCACCGCTTCTGAAGAGGCGCCACAGGTaGTTCCGGGTGATACCCTCA +
Preference number: 4 (lower is better)
Translates to: KLLRPLCPGSIRAVPPLLKRRHR*FRVIPS
Trigger: TGAGGGTATCACCCGGAAGCACCTGTGGCGCCTCTT...CAGAAGCGGTGGGACTGCCCTGATGGAGCCTGGGCATAGTGGCCTTAATAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR GCA 90 bp CAGACAGCAAGCAGCCAGGCCACCACGGGCAAGAGAGTGCAGCTCTTGTTCTCCCCAGCAACGAGGCAGTaGGTACTATGTAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: QTASSQATTGKRVQLLFSPATRQ*VLCRSN
Trigger: GTTGCTTCTACATAGTACGCACTGCCTCGTTGCTGG...GGAGAACAAGAGCTGCACTCTCTTGCCCGTGGTGGCCTGGCTGCTTGCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR GCA 90 bp TCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAATCCAGCATCACTGGATaGCAGTGGGACTGGGATCTC +
Preference number: 4 (lower is better)
Translates to: SPHCQSIRTGATKASTLESSITG*QWDWDL
Trigger: GAGATCCCAGTCCCACTGGCATCCAGTGATGCTGGA...TTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp CACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGCCTCTCAACATCACCCCACTaGCAGAGCATTAGGACGGGG +
Preference number: 4 (lower is better)
Translates to: HCQSIRTGATKASTLESLSTSPH*QSIRTG
Trigger: CCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTGA...GAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAACGGAGCTTGGAGCCTaGGTGAGCATCATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HPTARALGRGQPKPPLWKTELGA*VSIMSL
Trigger: CAAGGACATGATGCTCACCCAGGCTCCAAGCTCCGT...TTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCGGTTCCTGCTGTTCCTaGACCTCACGACGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLGSCCS*TSRRSL
Trigger: CAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACC...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCGTGAGGGTTATGCCTaGGCTCAGGAAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLREGYA*AQEDGL
Trigger: CAGCCCATCTTCCTGAGCCCAGGCATAACCCTCACG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGGGCAGCATCTGGAATaGGCTGGAGAACTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRGQHLE*AGELPG
Trigger: ACCTGGGAGTTCTCCAGCCCATTCCAGATGCTGCCC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGCTCCAGGAGCCCCGTaGCGGGCAGCATCTGGAATG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSAPGAP*RAASGM
Trigger: CATTCCAGATGCTGCCCGCCACGGGGCTCCTGGAGC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGCAGCTGGGCGCACTTaGCCACAGCCTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSAAGRT*PQPAAG
Trigger: TCCAGCTGCAGGCTGTGGCCAAGTGCGCCCAGCTGC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGATGCTCACCAGCAGCTaGGCGCACTTGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEMLTSS*AHLATA
Trigger: GGCTGTGGCCAAGTGCGCCCAGCTGCTGGTGAGCAT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGGGCATGAGAAGGCCTaGTCTTCGGCCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRGHEKA*SSASSS
Trigger: GGATGAACTGGCCGAAGACCAGGCCTTCTCATGCCC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGCCGTGCAGTCCGATTaGTTCTCAATCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRAVQSD*FSIHRG
Trigger: GCCCCTGTGGATTGAGAACCAATCGGACTGCACGGC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGCCTCATGGCAAACTGGAAGTaGGCCGTGCAGTCCGATTGG +
Preference number: 4 (lower is better)
Translates to: HCQSIRTGATKASTLESLMANWK*AVQSDW
Trigger: CCAATCGGACTGCACGGCCCACTTCCAGTTTGCCAT...GAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCAGTCGATGGCAAACTaGAAGTGGGCCGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLQSMAN*KWAVQS
Trigger: GGACTGCACGGCCCACTTCCAGTTTGCCATCGACTG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCAGGTCCAGGAACAGTaGGTCCTGGTGGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLQVQEQ*VLVVDE
Trigger: CTCATCCACCACCAGGACCCACTGTTCCTGGACCTG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAGGCTTCAGGATGGCTaGCTTGGTGCTGTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLRLQDG*LGAVRV
Trigger: CACTCGGACAGCACCAAGCCAGCCATCCTGAAGCCT...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGGCCATGGACTTGAGTaGGGGCACGTCGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEGHGLE*GHVAAL
Trigger: GAGAGCTGCGACGTGCCCCCACTCAAGTCCATGGCC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACCGTGTAAAGGCAGTTaGGGTGAGGCGGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRPCKGS*GEAAGS
Trigger: ACTTCCAGCCGCCTCACCCCAACTGCCTTTACACGG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCTGGCACGCAGAGGATaGAGCCTGAAGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAELARRG*SLKLPS
Trigger: CGAGGGCAGCTTCAGGCTCCATCCTCTGCGTGCCAG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAGAACTCCAGCATCACTaGATGCCAGTGGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: SPHCQSIRTGATKASTLEELQHH*MPVGLG
Trigger: TCCCAGTCCCACTGGCATCCAGTGATGCTGGAGTTC...TTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAACCTGGACACAGGAGATaGGGTATCAGCTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: HPTARALGRGQPKPPLWKPGHRR*GISFPK
Trigger: CTTGGGGAAGCTGATACCCCATCTCCTGTGTCCAGG...TTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAAGCCCTACTTTTCTCTaGGCCCCAAGACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HPTARALGRGQPKPPLWKSPTFL*APRPWP
Trigger: AGGCCAAGGTCTTGGGGCCCAGAGAAAAGTAGGGCT...TTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCTTTGGGGAGTGCATCTaGGTGTCCATGGAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLFGECI*VSMELA
Trigger: CGCAAGCTCCATGGACACTCAGATGCACTCCCCAAA...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACTCAGGAAGATGGGCTaGGGGATGACCGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRLRKMG*GMTVKK
Trigger: CTTCTTCACGGTCATCCCTCAGCCCATCTTCCTGAG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTACTCAGGAAGATGGGCTaGGGGATGACCGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLLRKMG*GMTVKK
Trigger: CTTCTTCACGGTCATCCCTCAGCCCATCTTCCTGAG...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAGACGATGGGGAGCGTaGGGGTTATGCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAERRWGA*GLCLGS
Trigger: TGAGCCCAGGCATAACCCTCACGCTCCCCATCGTCT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTGGAGAACTCCCAGGTaGAGAAGGTGGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEWRTPR*RRWAGP
Trigger: GGGACCTGCCCACCTTCTTCACCTGGGAGTTCTCCA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCACAGCCAGAAGGCATaGTGGAGCAGTAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLHSQKA*WSSSPQ
Trigger: CTGTGGACTACTGCTCCATCATGCCTTCTGGCTGTG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTACACAGCCAGAAGGCATaGTGGAGCAGTAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLHSQKA*WSSSPQ
Trigger: CTGTGGACTACTGCTCCATCATGCCTTCTGGCTGTG...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCACGCCGAAAGCAGATaGTGGGGTGAGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEHAESR*WGEWAG
Trigger: TCCAGCCCACTCACCCCATCATCTGCTTTCGGCGTG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTACCAGGTGAGGTGCTaGGGCTTCAGGATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEYQVRC*GFRMAG
Trigger: GCCAGCCATCCTGAAGCCTCAGCACCTCACCTGGTA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGTGTGCGGTACCAGGTaGGGTGCTGAGGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEVCGTR*GAEASG
Trigger: TCCTGAAGCCTCAGCACCTCACCTGGTACCGCACAC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACAGCTTGATCTCAGCTaGGTTCTCCCTTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRQLDLS*VLPWRG
Trigger: TCCCCTCCAAGGGAGAACTCAGCTGAGATCAAGCTG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTACAGCTTGATCTCAGCTaGGTTCTCCCTTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLQLDLS*VLPWRG
Trigger: TCCCCTCCAAGGGAGAACTCAGCTGAGATCAAGCTG...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGACTCAGCAGACACCCAGGCTaGGGCAAGGTGGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLKRSDVVPSLEMKRSGLSRHPG*GKVAPP
Trigger: AGGCGGGGCCACCTTGCCTCAGCCTGGGTGTCTGCT...GAGTCCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCTCACGGTGTGGTTCCTaGTGTTCCTGGACCTCACGA +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLSRCGS*CSWTSR
Trigger: TCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGA...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp GTAAGTGACCCTGATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACTCACGGTGTGGTTCCTaGTGTTCCTGGACCTCACGA +
Preference number: 4 (lower is better)
Translates to: VSDPDLDRTALLFSGPQDSRCGS*CSWTSR
Trigger: TCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGA...GTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATCAGGGTCACTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAGTGTCCATGGAGCTTaGGGGCTGGGCGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAESVHGA*GLGADG
Trigger: ACCATCAGCGCCCAGCCCGCAAGCTCCATGGACACT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGACTCTGGATGCTGCTCCTCTaGCGGCTGCCCGCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: LLKRSDVVPSLEMKRSGLWMLLL*RLPAPY
Trigger: GTACGGGGCGGGCAGCCGGCAGAGGAGCAGCATCCA...GAGTCCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGATCCTCCGGGCACTTGTaGTTTATGCTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRSSGHL*FMLTSS
Trigger: GCTGCTGGTGAGCATAAAGCACAAGTGCCCGGAGGA...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTCAATCCACAGGGGCTaGTCGGAGCGCTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSSIHRG*SERSPR
Trigger: CCTTGGGGAGCGCTCCGAGCAGCCCCTGTGGATTGA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTACTGGAAGTGGGCCGTaGAGTCCGATTGGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QHHPTARALGRGQPKPPLTGSGP*SPIGSQ
Trigger: TTGAGAACCAATCGGACTGCACGGCCCACTTCCAGT...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGGGTCATACGGGCCTTaGCCACCAGCGTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSGSYGP*PPASQR
Trigger: CCTTTGGGACGCTGGTGGGCAAGGCCCGTATGACCC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCCCTCGGTCACTTCCTaGCACCCCACCAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSPSVTS*HPTKPL
Trigger: GAGTGGCTTGGTGGGGTGGCAGGAAGTGACCGAGGG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCTAGGCCCAGCTTCCTaGCCGCTCAAAGCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLLGPAS*PLKAPL
Trigger: TAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAACGGAGCTTGGAGCCTaGGTGAGCATCATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRTELGA*VSIMSL
Trigger: CAAGGACATGATGCTCACCCAGGCTCCAAGCTCCGT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCACGGAGCTTGGAGCCTaGGTGAGCATCATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLTELGA*VSIMSL
Trigger: CAAGGACATGATGCTCACCCAGGCTCCAAGCTCCGT...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGGATGGCCACTGTGCTaGCACTCAGGCAGGATCCAC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEGWPLC*HSGRIH
Trigger: GTGGATCCTGCCTGAGTGCCAGCACAGTGGCCATCC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCATGGAGCTTGCGGGCTaGGCGCTGATGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSMELAG*ALMVLQ
Trigger: CTGCAGCACCATCAGCGCCCAGCCCGCAAGCTCCAT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGCATCTGAGTGTCCATaGAGCTTGCGGGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSASECP*SLRAGR
Trigger: GCGCCCAGCCCGCAAGCTCCATGGACACTCAGATGC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGTGGCGGGCAGCATCTaGAATGGGCTGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEVAGSI*NGLENS
Trigger: GGAGTTCTCCAGCCCATTCCAGATGCTGCCCGCCAC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCAAGCCCTCGGCATCCTaGTCCTCCGGGCACTTGTGC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSKPSAS*SSGHLC
Trigger: GCACAAGTGCCCGGAGGACCAGGATGCCGAGGGCTT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTAAGTACAACAGCTTCTaGAAGCCCTCGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: QHHPTARALGRGQPKPPLKYNSF*KPSASW
Trigger: CCAGGATGCCGAGGGCTTCCAGAAGCTGTTGTACTT...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGGAAGCACGATGCCATaGGCCGTGGGGCATGAGAAG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEGSTMP*AVGHEK
Trigger: CTTCTCATGCCCCACGGCCCATGGCATCGTGCTTCC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTATGGTGTCCAGAGTCTTaGGGTGGAAGAACACCGACA +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVWCPES*GGRTPT
Trigger: TGTCGGTGTTCTTCCACCCCAAGACTCTGGACACCA...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCATGGCAAACTGGAAGTaGGCCGTGCAGTCCGATTGG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLMANWK*AVQSDW
Trigger: CCAATCGGACTGCACGGCCCACTTCCAGTTTGCCAT...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAGTGGGTCCTGGTGGTaGATGAGACAGGCCACACGC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAESGSWW*MRQATR
Trigger: GCGTGTGGCCTGTCTCATCCACCACCAGGACCCACT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAAACAGTGGGTCCTGGTaGTGGATGAGACAGGCCACA +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRNSGSW*WMRQAT
Trigger: TGTGGCCTGTCTCATCCACCACCAGGACCCACTGTT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTGGTGCTGTCCGAGTaGCAGGTCCCCATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAELVLSE*QVPIRS
Trigger: GGACCTGATGGGGACCTGCCACTCGGACAGCACCAA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTCAGGATGGCTGGCTTaGTGCTGTCCGAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAESGWLA*CCPSGR
Trigger: CCTGCCACTCGGACAGCACCAAGCCAGCCATCCTGA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCACGTCGCAGCTCTCTaGAGTCACCCAGAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEHVAAL*SHPEGA
Trigger: TGCCCCTTCTGGGTGACTCCAGAGAGCTGCGACGTG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACTCAGTAGCCACGTGTaGCTGTCAGTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRLSSHV*LSVAVL
Trigger: CAGTACAGCCACTGACAGCCACACGTGGCTACTGAG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR CAA 72 bp GAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTaGATCTCAGCTGAGTTCTCCCTTGGAGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: EYLPVHPVFPNS*ISAEFSLGGEG
Trigger: CCCCTCCCCTCCAAGGGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
3UTR CAA 72 bp CAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTaGGAAAGCCTCCTCAAAAGATCGGACGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: QSIRTGATKAST*ESLLKRSDVVP
Trigger: TGGGACCACGTCCGATCTTTTGAGGAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCCTCAATGCCCCAGATaGCCCTCTTGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLPQCPR*PSCSLS
Trigger: AGAGAGTGAACAAGAGGGTCATCTGGGGCATTGAGG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACCTCAATGCCCCAGATaGCCCTCTTGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRPQCPR*PSCSLS
Trigger: AGAGAGTGAACAAGAGGGTCATCTGGGGCATTGAGG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTACCAAAGGGAGCACTCTaGGTATGGAGCTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVPKGAL*VWSFIW
Trigger: CCAGATAAAGCTCCATACTCAGAGTGCTCCCTTTGG...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCAGACGATGGGGAGCGTaGGGGTTATGCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSRRWGA*GLCLGS
Trigger: TGAGCCCAGGCATAACCCTCACGCTCCCCATCGTCT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTGGAGAACTCCCAGGTaGAGAAGGTGGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSWRTPR*RRWAGP
Trigger: GGGACCTGCCCACCTTCTTCACCTGGGAGTTCTCCA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGGGAAATTTCAATCCTaGAGGGGGCATTTACCGCCG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRGKFQS*RGHLPP
Trigger: CGGCGGTAAATGCCCCCTTCAGGATTGAAATTTCCC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GTAAGTGACCCTGATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACGGGAAATTTCAATCCTaGAGGGGGCATTTACCGCCG +
Preference number: 4 (lower is better)
Translates to: VSDPDLDRTALLFSGPQDGKFQS*RGHLPP
Trigger: CGGCGGTAAATGCCCCCTTCAGGATTGAAATTTCCC...GTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATCAGGGTCACTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp GGGTGCATTTTACACTCACGGCACGTCTCAATTGGGACCAGCCACATATTAAAAGCATGGCCATGGACTTaGGTGGGGGCACGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: GCILHSRHVSIGTSHILKAWPWT*VGARRS
Trigger: GCTGCGACGTGCCCCCACTCAAGTCCATGGCCATGC...TTTTAATATGTGGCTGGTCCCAATTGAGACGTGCCGTGAGTGTAAAATGCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGCAGAGGATGGAGCCTaGAGCTGCCCTCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSAEDGA*SCPRSL
Trigger: AAGTGACCGAGGGCAGCTTCAGGCTCCATCCTCTGC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCAGGGATGGCCACTGTaGTGGCACTCAGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSQGWPL*WHSGRI
Trigger: GATCCTGCCTGAGTGCCAGCACAGTGGCCATCCCTG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGCAGGCACTCATGGCTaGACTGCTGTCGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEAGTHG*TAVVDG
Trigger: GCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCAGTGTCCATGGAGCTTaGGGGCTGGGCGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSSVHGA*GLGADG
Trigger: ACCATCAGCGCCCAGCCCGCAAGCTCCATGGACACT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCACTTGGCCACAGCCTaGAGCTGGATGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSHLATA*SWMLLL
Trigger: GAGGAGCAGCATCCAGCTGCAGGCTGTGGCCAAGTG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCACTGGAAGTGGGCCGTaGAGTCCGATTGGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLTGSGP*SPIGSQ
Trigger: TTGAGAACCAATCGGACTGCACGGCCCACTTCCAGT...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAACTGGAAGTGGGCCGTaGAGTCCGATTGGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRTGSGP*SPIGSQ
Trigger: TTGAGAACCAATCGGACTGCACGGCCCACTTCCAGT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCTGGTTATGTCGCTGGTaGCGTCGAAGAAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLWLCRW*RRRRTR
Trigger: CCGAGTTCTTCTTCGACGGCACCAGCGACATAACCA...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AGCCACGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTACTCCCTCTCATTGCGTaGACACACCTTATAGATGGC +
Preference number: 4 (lower is better)
Translates to: SHVWLSVAVLDCAGLEPVLPLIA*THLIDG
Trigger: GCCATCTATAAGGTGTGTGCACGCAATGAGAGGGAG...TACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp CTCCACAGCCGTCAATGTGAGGTCCACTCTTCACAGACAGCAAGCAGCCAGGCCGGGAGGAAAAGTCCATaGATGGAAGCAGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: LHSRQCEVHSSQTASSQAGRKSP*MEAGCL
Trigger: CAAACATCCTGCTTCCATGCATGGACTTTTCCTCCC...GGCCTGGCTGCTTGCTGTCTGTGAAGAGTGGACCTCACATTGACGGCTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGGATGGCCACTGTGCTaGCACTCAGGCAGGATCCAC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSGWPLC*HSGRIH
Trigger: GTGGATCCTGCCTGAGTGCCAGCACAGTGGCCATCC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AAGCCTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGGCCACAGCCTGCAGCTaGATGCTGCTCCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: KPPQKIGRGPKFRDEKIRATACS*MLLLCR
Trigger: CCGGCAGAGGAGCAGCATCCAGCTGCAGGCTGTGGC...CCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAGTACAACAGCTTCTaGAAGCCCTCGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLKYNSF*KPSASW
Trigger: CCAGGATGCCGAGGGCTTCCAGAAGCTGTTGTACTT...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGGGCATGAGAAGGCCTaGTCTTCGGCCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEGHEKA*SSASSS
Trigger: GGATGAACTGGCCGAAGACCAGGCCTTCTCATGCCC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCTGGTGTCCAGAGTCTTaGGGTGGAAGAACACCGACA +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLWCPES*GGRTPT
Trigger: TGTCGGTGTTCTTCCACCCCAAGACTCTGGACACCA...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTAGTAGTCCACAGTTCTaGTGTCCAGAGTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: QHHPTARALGRGQPKPPLSSPQF*CPESWG
Trigger: ACCCCAAGACTCTGGACACCAGAACTGTGGACTACT...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCAGTCGATGGCAAACTaGAAGTGGGCCGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEQSMAN*KWAVQS
Trigger: GGACTGCACGGCCCACTTCCAGTTTGCCATCGACTG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAGGCTTCAGGATGGCTaGCTTGGTGCTGTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAERLQDG*LGAVRV
Trigger: CACTCGGACAGCACCAAGCCAGCCATCCTGAAGCCT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGCTGAGGCTTCAGGATaGCTGGCTTGGTGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSAEASG*LAWCCP
Trigger: CGGACAGCACCAAGCCAGCCATCCTGAAGCCTCAGC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTATCTTCTCCTTCAGCATaGCATCCAGGATGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLSSPSA*HPGCQG
Trigger: CCCCTGACATCCTGGATGCCATGCTGAAGGAGAAGA...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAATCTTGCCCTTGGTGTaGTTCATCAGGCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRILPLV*FIRHRG
Trigger: ACCCCTGTGCCTGATGAACCACACCAAGGGCAAGAT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCATCTTGCCCTTGGTGTaGTTCATCAGGCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLILPLV*FIRHRG
Trigger: ACCCCTGTGCCTGATGAACCACACCAAGGGCAAGAT...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCCGTGTAAAGGCAGTTaGGGTGAGGCGGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEPCKGS*GEAAGS
Trigger: ACTTCCAGCCGCCTCACCCCAACTGCCTTTACACGG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp ACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGCACACACCTTATAGATaGCGAAGGCTTCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TSPHCQSIRTGATKASTLHTPYR*RRLRAP
Trigger: TGGAGCTCGAAGCCTTCGCCATCTATAAGGTGTGTG...CAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp ACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGTCAAGAAGGAAGGGATaGGCAGGACTAACGGATGAG +
Preference number: 4 (lower is better)
Translates to: TSPHCQSIRTGATKASTLSRRKG*AGLTDE
Trigger: CTCATCCGTTAGTCCTGCCCATCCCTTCCTTCTTGA...CAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR CAA 72 bp GGAGGGAGGAAAAGTCCATGCATGGAAGCAGGATGTTaGCTGGGCACAAGTTCTGAGCCTCTGGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GGRKSPCMEAGC*LGTSSEPLGEK
Trigger: TTTCTCCCCCAGAGGCTCAGAACTTGTGCCCAGCAAACATCCTGCTTCCATGCATGGACTTTTCCTCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR TCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCAGCTTGGAGCCTGGGTaGGCATCATGTCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSSLEPG*ASCPWD
Trigger: GTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCTCAGGAAGATGGGCTaGGGGATGACCGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAELRKMG*GMTVKK
Trigger: CTTCTTCACGGTCATCCCTCAGCCCATCTTCCTGAG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCACAGCCAGAAGGCATaGTGGAGCAGTAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEHSQKA*WSSSPQ
Trigger: CTGTGGACTACTGCTCCATCATGCCTTCTGGCTGTG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCAAGCAGATGATGGGGTaGGTGGGCTGGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSKQMMG*VGWKAQ
Trigger: CTGTGCCTTCCAGCCCACTCACCCCATCATCTGCTT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCAGCTTGATCTCAGCTaGGTTCTCCCTTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEQLDLS*VLPWRG
Trigger: TCCCCTCCAAGGGAGAACTCAGCTGAGATCAAGCTG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCCGACCCAGGGAAGCTaGGTCAGAAGCCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSPTQGS*VRSPFH
Trigger: ATGGAAAGGGCTTCTGACTCAGCTTCCCTGGGTCGG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTCACGGTGTGGTTCCTaGTGTTCCTGGACCTCACGA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAESRCGS*CSWTSR
Trigger: TCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTCCCAGCCTTTCCAATaGAGCTCCTCAGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAESQPFQ*SSSATS
Trigger: TGAGGTGGCTGAGGAGCTGCATTGGAAAGGCTGGGA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTCCTCCGGGCACTTGTaGTTTATGCTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAESSGHL*FMLTSS
Trigger: GCTGCTGGTGAGCATAAAGCACAAGTGCCCGGAGGA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTTGTGTAGCCTGATCTaGCTCTCCGAGGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSLCSLI*LSEVQP
Trigger: GGGCTGCACCTCGGAGAGGCAGATCAGGCTACACAA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AAGCCTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGGGATGGCTGGCTTGGTaGTGTCCGAGTGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KPPQKIGRGPKFRDEKIRGWLAW*CPSGRS
Trigger: GGACCTGCCACTCGGACAGCACCAAGCCAGCCATCC...CCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACTCCCTCTCATTGCGTaGACACACCTTATAGATGGC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRLPLIA*THLIDG
Trigger: GCCATCTATAAGGTGTGTGCACGCAATGAGAGGGAG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAGGGAGTATCTCCCTGTaGACCCAGTTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRGSISL*TQFSQT
Trigger: TGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCC...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGGTTCCTGCTGTTCCTaGACCTCACGACGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSGSCCS*TSRRSL
Trigger: CAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATCACCCCACTGCCAGGGTTCCTGCTGTTCCTaGACCTCACGACGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SQASTTLFLQTSTSPHCQGSCCS*TSRRSL
Trigger: CAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACC...CTGGCAGTGGGGTGATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp GGGTGCATTTTACACTCACGGCACGTCTCAATTGGGACCAGCCACATATTAAAAGCATCTGAGTGTCCATaGAGCTTGCGGGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: GCILHSRHVSIGTSHILKASECP*SLRAGR
Trigger: GCGCCCAGCCCGCAAGCTCCATGGACACTCAGATGC...TTTTAATATGTGGCTGGTCCCAATTGAGACGTGCCGTGAGTGTAAAATGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGATCTCTCCTGCTTCTTTaGGGAGTGCATCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRSLLLL*GVHLSV
Trigger: GACACTCAGATGCACTCCCCAAAGAAGCAGGAGAGA...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCGTGAGGGTTATGCCTaGGCTCAGGAAGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSREGYA*AQEDGL
Trigger: CAGCCCATCTTCCTGAGCCCAGGCATAACCCTCACG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGGGCAGCATCTGGAATaGGCTGGAGAACTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSGQHLE*AGELPG
Trigger: ACCTGGGAGTTCTCCAGCCCATTCCAGATGCTGCCC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGACTCATGCTCACCAGCAGCTaGGCGCACTTGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LLKRSDVVPSLEMKRSGLMLTSS*AHLATA
Trigger: GGCTGTGGCCAAGTGCGCCCAGCTGCTGGTGAGCAT...GAGTCCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGGGCATGAGAAGGCCTaGTCTTCGGCCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSGHEKA*SSASSS
Trigger: GGATGAACTGGCCGAAGACCAGGCCTTCTCATGCCC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGATCCAGAGTCTTGGGGTaGAAGAACACCGACACACAT +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRSRVLG*KNTDTH
Trigger: ATGTGTGTCGGTGTTCTTCCACCCCAAGACTCTGGA...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCTCCAGAGTCTTGGGGTaGAAGAACACCGACACACAT +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLSRVLG*KNTDTH
Trigger: ATGTGTGTCGGTGTTCTTCCACCCCAAGACTCTGGA...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGCCGTGCAGTCCGATTaGTTCTCAATCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSAVQSD*FSIHRG
Trigger: GCCCCTGTGGATTGAGAACCAATCGGACTGCACGGC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGATGGCAAACTGGAAGTaGGCCGTGCAGTCCGATTGG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEMANWK*AVQSDW
Trigger: CCAATCGGACTGCACGGCCCACTTCCAGTTTGCCAT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTCTCCAAGCAGTCGATaGCAAACTGGAAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAESPSSR*QTGSGP
Trigger: CGGCCCACTTCCAGTTTGCCATCGACTGCTTGGAGA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAACAGTGGGTCCTGGTaGTGGATGAGACAGGCCACA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAENSGSW*WMRQAT
Trigger: TGTGGCCTGTCTCATCCACCACCAGGACCCACTGTT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCAGGAACAGTGGGTCCTaGTGGTGGATGAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSRNSGS*WWMRQA
Trigger: GGCCTGTCTCATCCACCACCAGGACCCACTGTTCCT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGATGAGAGCCCCGTTCTaGTCCTGTGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEMRAPF*SCASFF
Trigger: GAAGAAGCTGGCACAGGACCAGAACGGGGCTCTCAT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCCGTGTAAAGGCAGTTaGGGTGAGGCGGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSPCKGS*GEAAGS
Trigger: ACTTCCAGCCGCCTCACCCCAACTGCCTTTACACGG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCACACACCTTATAGATaGCGAAGGCTTCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLHTPYR*RRLRAP
Trigger: TGGAGCTCGAAGCCTTCGCCATCTATAAGGTGTGTG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACACACACCTTATAGATaGCGAAGGCTTCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRHTPYR*RRLRAP
Trigger: TGGAGCTCGAAGCCTTCGCCATCTATAAGGTGTGTG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACTAGGCCAGGAGCTTTaGAGGAGACAAACTCATAGG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRLGQEL*RRQTHR
Trigger: CCTATGAGTTTGTCTCCTCCAAAGCTCCTGGCCTAG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAATGAGAAAATCAGATaGGCCGAGCTAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLNEKIR*AELGQE
Trigger: CTCCTGGCCTAGCTCGGCCCATCTGATTTTCTCATT...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAAATGAGAAAATCAGATaGGCCGAGCTAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRNEKIR*AELGQE
Trigger: CTCCTGGCCTAGCTCGGCCCATCTGATTTTCTCATT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCTCAAGAAGGAAGGGATaGGCAGGACTAACGGATGAG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLSRRKG*AGLTDE
Trigger: CTCATCCGTTAGTCCTGCCCATCCCTTCCTTCTTGA...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTTTGGGGAGTGCATCTaGGTGTCCATGGAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSFGECI*VSMELA
Trigger: CGCAAGCTCCATGGACACTCAGATGCACTCCCCAAA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGACTCACGGGTTGTGTAGCCTaGTCTGCCTCTCCGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLKRSDVVPSLEMKRSGLTGCVA*SASPRC
Trigger: GCACCTCGGAGAGGCAGATCAGGCTACACAACCCGT...GAGTCCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CTGAACCTCAGCAGAGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATGCAGAGGATGGAGCCTaGAGCTGCCCTCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: LNLSRARHLQPYSYKPQHAEDGA*SCPRSL
Trigger: AAGTGACCGAGGGCAGCTTCAGGCTCCATCCTCTGC...ATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCTCTGCTGAGGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCTTTTCCCAAACAGCTTaGTCTCAGCTGAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLFSQTA*SQLSSP
Trigger: GGGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAA...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGATTTTCCCAAACAGCTTaGTCTCAGCTGAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRFSQTA*SQLSSP
Trigger: GGGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAA...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp AAGTTATTAAGGCCACTATGCCCAGGCTCCATCAGGGCAGTCCCACCGCTTCTGGGACAAATTCAGCTTTaGACCTGGCTCTGTCCATTC +
Preference number: 4 (lower is better)
Translates to: KLLRPLCPGSIRAVPPLLGQIQL*TWLCPF
Trigger: GAATGGACAGAGCCAGGTTCAAAGCTGAATTTGTCC...CAGAAGCGGTGGGACTGCCCTGATGGAGCCTGGGCATAGTGGCCTTAATAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR GCA 90 bp GGGTGCATTTTACACTCACGGCACGTCTCAATTGGGACCAGCCACATATTAAAACAGGGATGGCCACTGTaGTGGCACTCAGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: GCILHSRHVSIGTSHILKQGWPL*WHSGRI
Trigger: GATCCTGCCTGAGTGCCAGCACAGTGGCCATCCCTG...TTTTAATATGTGGCTGGTCCCAATTGAGACGTGCCGTGAGTGTAAAATGCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp CGTGTGGCTGTCAGTGGCTGTACTGGACTGTGCAGGTCTAGAGCCTGTAACCTATTGTTCACTCTCTCCTaGTTCTTTGGGGAGTGCATC +
Preference number: 4 (lower is better)
Translates to: RVAVSGCTGLCRSRACNLLFTLS*FFGECI
Trigger: GATGCACTCCCCAAAGAAGCAGGAGAGAGTGAACAA...TAGGTTACAGGCTCTAGACCTGCACAGTCCAGTACAGCCACTGACAGCCACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTCCCAGCCTTTCCAATaGAGCTCCTCAGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSSQPFQ*SSSATS
Trigger: TGAGGTGGCTGAGGAGCTGCATTGGAAAGGCTGGGA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATCACCCCACTGCCAGTCCTCCGGGCACTTGTaGTTTATGCTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SQASTTLFLQTSTSPHCQSSGHL*FMLTSS
Trigger: GCTGCTGGTGAGCATAAAGCACAAGTGCCCGGAGGA...CTGGCAGTGGGGTGATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp CTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGACTCGGCTGGAAGGCACAGTaGAGGGTCATACGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LLKRSDVVPSLEMKRSGLGWKAQ*RVIRAL
Trigger: CAAGGCCCGTATGACCCTGCACTGTGCCTTCCAGCC...GAGTCCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTGGTTATGTCGCTGGTaGCGTCGAAGAAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEWLCRW*RRRRTR
Trigger: CCGAGTTCTTCTTCGACGGCACCAGCGACATAACCA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCTAGGCCCAGCTTCCTaGCCGCTCAAAGCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSLGPAS*PLKAPL
Trigger: TAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAGAAGAACTTGGTCTTaGGGGGCCTGTACTTCATCT +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLRRTWS*GACTSS
Trigger: AGATGAAGTACAGGCCCCCCAAGACCAAGTTCTTCT...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAAGTACAACAGCTTCTaGAAGCCCTCGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEKYNSF*KPSASW
Trigger: CCAGGATGCCGAGGGCTTCCAGAAGCTGTTGTACTT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTCTCCAAGCAGTCGATaGCAAACTGGAAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSSPSSR*QTGSGP
Trigger: CGGCCCACTTCCAGTTTGCCATCGACTGCTTGGAGA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATCACCCCACTGCCAGAACAGTGGGTCCTGGTaGTGGATGAGACAGGCCACA +
Preference number: 4 (lower is better)
Translates to: SQASTTLFLQTSTSPHCQNSGSW*WMRQAT
Trigger: TGTGGCCTGTCTCATCCACCACCAGGACCCACTGTT...CTGGCAGTGGGGTGATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTCTTCTCCTTCAGCATaGCATCCAGGATGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAESSPSA*HPGCQG
Trigger: CCCCTGACATCCTGGATGCCATGCTGAAGGAGAAGA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCATGAGAGCCCCGTTCTaGTCCTGTGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSMRAPF*SCASFF
Trigger: GAAGAAGCTGGCACAGGACCAGAACGGGGCTCTCAT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AAGTTATTAAGGCCACTATGCCCAGGCTCCATCAGGGCAGTCCCACCGCTTCTGGGAAAAGTCCATGCATaGAAGCAGGATGTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KLLRPLCPGSIRAVPPLLGKVHA*KQDVCW
Trigger: CCAGCAAACATCCTGCTTCCATGCATGGACTTTTCC...CAGAAGCGGTGGGACTGCCCTGATGGAGCCTGGGCATAGTGGCCTTAATAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTCCAAAGCCTCCACTTTaGAAAGCCTCCTCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: QHHPTARALGRGQPKPPLPKPPL*KASSKD
Trigger: ATCTTTTGAGGAGGCTTTCCAAAGTGGAGGCTTTGG...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCCTCAATGCCCCAGATaGCCCTCTTGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSPQCPR*PSCSLS
Trigger: AGAGAGTGAACAAGAGGGTCATCTGGGGCATTGAGG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCTCTGCTTGTTTCTTCTaGACACTCTTGCCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLSACFF*TLLPLR
Trigger: CCTAAGAGGCAAGAGTGTTCAGAAGAAACAAGCAGA...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGACTCGCTGAAAGGTCACCTTaGTCTGAGAGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLKRSDVVPSLEMKRSGLAERSP*SERPGL
Trigger: CAGGCCAGGCCTCTCAGATCAAGGTGACCTTTCAGC...GAGTCCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGGGAAATTTCAATCCTaGAGGGGGCATTTACCGCCG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSGKFQS*RGHLPP
Trigger: CGGCGGTAAATGCCCCCTTCAGGATTGAAATTTCCC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR TCA 90 bp CTGAACCTCAGCAGAGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATCCTGGATGGGAATCATaGGAGCCCCGTTCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LNLSRARHLQPYSYKPQHPGWES*EPRSGP
Trigger: AGGACCAGAACGGGGCTCTCATGATTCCCATCCAGG...ATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCTCTGCTGAGGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAATTCCTCCCTCTCATTaGGTGCACACACCTTATAGA +
Preference number: 4 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRIPPSH*VHTPYR
Trigger: TCTATAAGGTGTGTGCACGCAATGAGAGGGAGGAAT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp GTAAGTGACCCTGATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACATTCCTCCCTCTCATTaGGTGCACACACCTTATAGA +
Preference number: 4 (lower is better)
Translates to: VSDPDLDRTALLFSGPQDIPPSH*VHTPYR
Trigger: TCTATAAGGTGTGTGCACGCAATGAGAGGGAGGAAT...GTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATCAGGGTCACTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp AACTGGACACATATACACGAATGCCAACAGTCCCAAATAGAAACAGCCCAAACTATGGAGCTTGCGGGCTaGGCGCTGATGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NWTHIHECQQSQIETAQTMELAG*ALMVLQ
Trigger: CTGCAGCACCATCAGCGCCCAGCCCGCAAGCTCCAT...AGTTTGGGCTGTTTCTATTTGGGACTGTTGGCATTCGTGTATATGTGTCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTCTCTCCTGCTTCTTTaGGGAGTGCATCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAESLLLL*GVHLSV
Trigger: GACACTCAGATGCACTCCCCAAAGAAGCAGGAGAGA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGAACCAGATTCCTTGTaGTCTCCTTTCCTAGCTCCC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEEPDSL*SPFLAP
Trigger: GGGAGCTAGGAAAGGAGACCACAAGGAATCTGGTTC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCAAACCACAGCTaGTCCATGTACTCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEFSNHS*SMYSFA
Trigger: GGCGAAGGAGTACATGGACCAGCTGTGGTTTGAGAA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409865.7
ENST00000410037.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTGGTGTCCAGAGTCTTaGGGTGGAAGAACACCGACA +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSWCPES*GGRTPT
Trigger: TGTCGGTGTTCTTCCACCCCAAGACTCTGGACACCA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAGTAGTCCACAGTTCTaGTGTCCAGAGTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAESSPQF*CPESWG
Trigger: ACCCCAAGACTCTGGACACCAGAACTGTGGACTACT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTCTTCTCCTTCAGCATaGCATCCAGGATGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSSSPSA*HPGCQG
Trigger: CCCCTGACATCCTGGATGCCATGCTGAAGGAGAAGA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGATGTCCTCCAGATCCTaGATGGGAATCATGAGAGCC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEMSSRS*MGIMRA
Trigger: GGCTCTCATGATTCCCATCCAGGATCTGGAGGACAT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAATGAGAAAATCAGATaGGCCGAGCTAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAENEKIR*AELGQE
Trigger: CTCCTGGCCTAGCTCGGCCCATCTGATTTTCTCATT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp GTCTTCGCTGAGTCCTTAACCTTGCTGACCCTCAGCCTCCCTGTCCATGAAAGAAACAAAGGCACATGGTaGAGGGAGGAAAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: VFAESLTLLTLSLPVHERNKGTW*REEKSM
Trigger: CATGGACTTTTCCTCCCTCCACCATGTGCCTTTGTT...TCTTTCATGGACAGGGAGGCTGAGGGTCAGCAAGGTTAAGGACTCAGCGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp CTGAACCTCAGCAGAGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATGGATGCCAGTGGGACTaGGATCTCCAGGTAGTCACG +
Preference number: 4 (lower is better)
Translates to: LNLSRARHLQPYSYKPQHGCQWD*DLQVVT
Trigger: CGTGACTACCTGGAGATCCCAGTCCCACTGGCATCC...ATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCTCTGCTGAGGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCATCACTGGATGCCAGTaGGACTGGGATCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSITGCQ*DWDLQV
Trigger: TACCTGGAGATCCCAGTCCCACTGGCATCCAGTGAT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
3UTR CAA 72 bp AGGCAGTGCGTACTATGTAGAAGCAACTCAGTCTTCTaGCTGACTAACTGGGGTAGGCAAGGGCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: RQCVLCRSNSVF*LTNWGRQGLWT
Trigger: AGTCCAGAGCCCTTGCCTACCCCAGTTAGTCAGCAAGAAGACTGAGTTGCTTCTACATAGTACGCACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR TCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCCAAAGGGAGCACTCTaGGTATGGAGCTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSPKGAL*VWSFIW
Trigger: CCAGATAAAGCTCCATACTCAGAGTGCTCCCTTTGG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409865.7
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTGTTCACTCTCTCCTaGTTCTTTGGGGAGTGCATC +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAELFTLS*FFGECI
Trigger: GATGCACTCCCCAAAGAAGCAGGAGAGAGTGAACAA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp CTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGACTCTCCCAGCCTTTCCAATaGAGCTCCTCAGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: LLKRSDVVPSLEMKRSGLSQPFQ*SSSATS
Trigger: TGAGGTGGCTGAGGAGCTGCATTGGAAAGGCTGGGA...GAGTCCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp GTAAGTGACCCTGATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACTCTTCTGAACACTCTTaGCTCTTAGGAGAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: VSDPDLDRTALLFSGPQDSSEHS*LLGEEE
Trigger: TTCCTCTTCTCCTAAGAGGCAAGAGTGTTCAGAAGA...GTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATCAGGGTCACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCTCCCTCTCATTGCGTaGACACACCTTATAGATGGC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSLPLIA*THLIDG
Trigger: GCCATCTATAAGGTGTGTGCACGCAATGAGAGGGAG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGGGAGTATCTCCCTGTaGACCCAGTTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSGSISL*TQFSQT
Trigger: TGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp TTTCCCACAGGATTGGAGGAGAAAAGACTTGTAAAGCGCAGGTCCTGGCATGCATTATTAAGGCCACTATaGCCAGGCTCCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: FPTGLEEKRLVKRRSWHALLRPL*PGSIRA
Trigger: TGCCCTGATGGAGCCTGGGCATAGTGGCCTTAATAA...TGCATGCCAGGACCTGCGCTTTACAAGTCTTTTCTCCTCCAATCCTGTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp ACTTTGGGAAATAGTTTGGTTTATCTACAGCAAGTGAACAGGTACATGGCCCAAGCATCTGAGTGTCCATaGAGCTTGCGGGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: TLGNSLVYLQQVNRYMAQASECP*SLRAGR
Trigger: GCGCCCAGCCCGCAAGCTCCATGGACACTCAGATGC...TTGGGCCATGTACCTGTTCACTTGCTGTAGATAAACCAAACTATTTCCCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGAACCAGATTCCTTGTaGTCTCCTTTCCTAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSEPDSL*SPFLAP
Trigger: GGGAGCTAGGAAAGGAGACCACAAGGAATCTGGTTC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp ACTTTGGGAAATAGTTTGGTTTATCTACAGCAAGTGAACAGGTACATGGCCCAACGGGGCTCAAGGCTGTaGCACTGGGTCCTTGATCCC +
Preference number: 4 (lower is better)
Translates to: TLGNSLVYLQQVNRYMAQRGSRL*HWVLDP
Trigger: GGGATCAAGGACCCAGTGCCACAGCCTTGAGCCCCG...TTGGGCCATGTACCTGTTCACTTGCTGTAGATAAACCAAACTATTTCCCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTGTATGGAGCTTTATCTaGCTTTTACTCTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QHHPTARALGRGQPKPPLVWSFI*LLLSAC
Trigger: ACAAGCAGAGAGTAAAAGCCAGATAAAGCTCCATAC...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTTCTCAAACCACAGCTaGTCCATGTACTCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSFSNHS*SMYSFA
Trigger: GGCGAAGGAGTACATGGACCAGCTGTGGTTTGAGAA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409865.7
ENST00000410037.5
CDS-3UTR CCA 90 bp AGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATCACCCCACTGCCAGTCCAGAGTCTTGGGGTaGAAGAACACCGACACACAT +
Preference number: 4 (lower is better)
Translates to: SQASTTLFLQTSTSPHCQSRVLG*KNTDTH
Trigger: ATGTGTGTCGGTGTTCTTCCACCCCAAGACTCTGGA...CTGGCAGTGGGGTGATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CTGAACCTCAGCAGAGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATTCTCCAAGCAGTCGATaGCAAACTGGAAGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: LNLSRARHLQPYSYKPQHSPSSR*QTGSGP
Trigger: CGGCCCACTTCCAGTTTGCCATCGACTGCTTGGAGA...ATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCTCTGCTGAGGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCATGTCCTCCAGATCCTaGATGGGAATCATGAGAGCC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSMSSRS*MGIMRA
Trigger: GGCTCTCATGATTCCCATCCAGGATCTGGAGGACAT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAGATGGTTATGTCGCTaGTGCCGTCGAAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAERWLCR*CRRRRT
Trigger: AGTTCTTCTTCGACGGCACCAGCGACATAACCATCT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCTAGGCCAGGAGCTTTaGAGGAGACAAACTCATAGG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSLGQEL*RRQTHR
Trigger: CCTATGAGTTTGTCTCCTCCAAAGCTCCTGGCCTAG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTCAAGAAGGAAGGGATaGGCAGGACTAACGGATGAG +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSSRRKG*AGLTDE
Trigger: CTCATCCGTTAGTCCTGCCCATCCCTTCCTTCTTGA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp ATTCTTTTCATACTAAGTCTTGAAATCCAGGGTGCATTTTACACTCACGGCACGTGGGCCCCAAGACCTTaGCCTCTGGGCAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ILFILSLEIQGAFYTHGTWAPRP*PLGKGS
Trigger: ACTGCCCTTGCCCAGAGGCCAAGGTCTTGGGGCCCA...CGTGCCGTGAGTGTAAAATGCACCCTGGATTTCAAGACTTAGTATGAAAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp AGAGGAAAATATCTTAATGACCTAGGGGTAGAGAAGGACTTCTTAGGAGAAGCACTGCACTGCTGTCGTTaGTGGCAGGGATGGCCACTG +
Preference number: 4 (lower is better)
Translates to: RGKYLNDLGVEKDFLGEALHCCR*WQGWPL
Trigger: CAGTGGCCATCCCTGCCATCAACGACAGCAGTGCAG...TGCTTCTCCTAAGAAGTCCTTCTCTACCCCTAGGTCATTAAGATATTTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR TCA 90 bp AGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATCACCCCACTGCCAGTTTTCCCAAACAGCTTaGTCTCAGCTGAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SQASTTLFLQTSTSPHCQFSQTA*SQLSSP
Trigger: GGGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAA...CTGGCAGTGGGGTGATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp GTAAGTGACCCTGATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACAAAGCTCCTTTAGAGTaGCCACTTCTTAATTCAAGG +
Preference number: 4 (lower is better)
Translates to: VSDPDLDRTALLFSGPQDKAPLE*PLLNSR
Trigger: CCTTGAATTAAGAAGTGGTCACTCTAAAGGAGCTTT...GTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATCAGGGTCACTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp CTGAACCTCAGCAGAGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATAAATATCTGACAGGCTaGACCTCAGCAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LNLSRARHLQPYSYKPQHKYLTG*TSAEPG
Trigger: GCCTGGCTCTGCTGAGGTTCAGCCTGTCAGATATTT...ATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCTCTGCTGAGGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp AGAGGAAAATATCTTAATGACCTAGGGGTAGAGAAGGACTTCTTAGGAGAAGCACAGGGATGGCCACTGTaGTGGCACTCAGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: RGKYLNDLGVEKDFLGEAQGWPL*WHSGRI
Trigger: GATCCTGCCTGAGTGCCAGCACAGTGGCCATCCCTG...TGCTTCTCCTAAGAAGTCCTTCTCTACCCCTAGGTCATTAAGATATTTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR GCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTTGTTCACTCTCTCCTaGTTCTTTGGGGAGTGCATC +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSLFTLS*FFGECI
Trigger: GATGCACTCCCCAAAGAAGCAGGAGAGAGTGAACAA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGATTCCTCCCTCTCATTaGGTGCACACACCTTATAGA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEIPPSH*VHTPYR
Trigger: TCTATAAGGTGTGTGCACGCAATGAGAGGGAGGAAT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp AACTGGACACATATACACGAATGCCAACAGTCCCAAATAGAAACAGCCCAAACTCCTCACGACGGAGCTTaGAGCCTGGGTGAGCATCAT +
Preference number: 4 (lower is better)
Translates to: NWTHIHECQQSQIETAQTPHDGA*SLGEHH
Trigger: ATGATGCTCACCCAGGCTCCAAGCTCCGTCGTGAGG...AGTTTGGGCTGTTTCTATTTGGGACTGTTGGCATTCGTGTATATGTGTCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCAGAAGAACTTGGTCTTaGGGGGCCTGTACTTCATCT +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSRRTWS*GACTSS
Trigger: AGATGAAGTACAGGCCCCCCAAGACCAAGTTCTTCT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp ATTCTTTTCATACTAAGTCTTGAAATCCAGGGTGCATTTTACACTCACGGCACGGGAAGCACGATGCCATaGGCCGTGGGGCATGAGAAG +
Preference number: 4 (lower is better)
Translates to: ILFILSLEIQGAFYTHGTGSTMP*AVGHEK
Trigger: CTTCTCATGCCCCACGGCCCATGGCATCGTGCTTCC...CGTGCCGTGAGTGTAAAATGCACCCTGGATTTCAAGACTTAGTATGAAAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCAGATGGTTATGTCGCTaGTGCCGTCGAAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSRWLCR*CRRRRT
Trigger: AGTTCTTCTTCGACGGCACCAGCGACATAACCATCT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CCA 90 bp CTGAACCTCAGCAGAGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATATCTTGCCCTTGGTGTaGTTCATCAGGCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: LNLSRARHLQPYSYKPQHILPLV*FIRHRG
Trigger: ACCCCTGTGCCTGATGAACCACACCAAGGGCAAGAT...ATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCTCTGCTGAGGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CAGCAGATGCCCAGTGAATGTGTCTCATTTGTTAAGTTATTAAGGCCACTATGCGAATACCACGGAAGGTaGGGCCTTGAATGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: QQMPSECVSFVKLLRPLCEYHGR*GLEWCG
Trigger: GCCGCACCATTCAAGGCCCCACCTTCCGTGGTATTC...GCATAGTGGCCTTAATAACTTAACAAATGAGACACATTCACTGGGCATCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGACGGCACGTCTCAATTaGGACCAGCCACATATTAAA +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAETARLN*DQPHIK
Trigger: TTTAATATGTGGCTGGTCCCAATTGAGACGTGCCGT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp AGAGGAAAATATCTTAATGACCTAGGGGTAGAGAAGGACTTCTTAGGAGAAGCAAGCTTGGAGCCTGGGTaGGCATCATGTCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: RGKYLNDLGVEKDFLGEASLEPG*ASCPWD
Trigger: GTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCT...TGCTTCTCCTAAGAAGTCCTTCTCTACCCCTAGGTCATTAAGATATTTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR TCA 90 bp AACTGGACACATATACACGAATGCCAACAGTCCCAAATAGAAACAGCCCAAACTTTTGGGGAGTGCATCTaGGTGTCCATGGAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: NWTHIHECQQSQIETAQTFGECI*VSMELA
Trigger: CGCAAGCTCCATGGACACTCAGATGCACTCCCCAAA...AGTTTGGGCTGTTTCTATTTGGGACTGTTGGCATTCGTGTATATGTGTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR TCA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTCTGCTTGTTTCTTCTaGACACTCTTGCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSSACFF*TLLPLQ
Trigger: TTGGAGAGGCAAGAGTGTTCAGAAGAAACAAGCAGA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409865.7
CDS-3UTR GCA 90 bp CAGCAGATGCCCAGTGAATGTGTCTCATTTGTTAAGTTATTAAGGCCACTATGCTGGGGCCTTGAATGGTaGGGCCCCGAAATTGAAGTC +
Preference number: 4 (lower is better)
Translates to: QQMPSECVSFVKLLRPLCWGLEW*GPEIEV
Trigger: GACTTCAATTTCGGGGCCGCACCATTCAAGGCCCCA...GCATAGTGGCCTTAATAACTTAACAAATGAGACACATTCACTGGGCATCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS-3UTR GCA 90 bp CTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGACTCGGGAGTATCTCCCTGTaGACCCAGTTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: LLKRSDVVPSLEMKRSGLGSISL*TQFSQT
Trigger: TGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCC...GAGTCCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp ACTTTGGGAAATAGTTTGGTTTATCTACAGCAAGTGAACAGGTACATGGCCCAAGGTTCCTGCTGTTCCTaGACCTCACGACGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TLGNSLVYLQQVNRYMAQGSCCS*TSRRSL
Trigger: CAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACC...TTGGGCCATGTACCTGTTCACTTGCTGTAGATAAACCAAACTATTTCCCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp GGGTGCATTTTACACTCACGGCACGTCTCAATTGGGACCAGCCACATATTAAAATCTCTCCTGCTTCTTTaGGGAGTGCATCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GCILHSRHVSIGTSHILKSLLLL*GVHLSV
Trigger: GACACTCAGATGCACTCCCCAAAGAAGCAGGAGAGA...TTTTAATATGTGGCTGGTCCCAATTGAGACGTGCCGTGAGTGTAAAATGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp CTGAACCTCAGCAGAGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATATGTCCTCCAGATCCTaGATGGGAATCATGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LNLSRARHLQPYSYKPQHMSSRS*MGIMRA
Trigger: GGCTCTCATGATTCCCATCCAGGATCTGGAGGACAT...ATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCTCTGCTGAGGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp AAGCCTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGCTAGGCCAGGAGCTTTaGAGGAGACAAACTCATAGG +
Preference number: 4 (lower is better)
Translates to: KPPQKIGRGPKFRDEKIRLGQEL*RRQTHR
Trigger: CCTATGAGTTTGTCTCCTCCAAAGCTCCTGGCCTAG...CCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp AACTGGACACATATACACGAATGCCAACAGTCCCAAATAGAAACAGCCCAAACTCCTCAATGCCCCAGATaGCCCTCTTGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: NWTHIHECQQSQIETAQTPQCPR*PSCSLS
Trigger: AGAGAGTGAACAAGAGGGTCATCTGGGGCATTGAGG...AGTTTGGGCTGTTTCTATTTGGGACTGTTGGCATTCGTGTATATGTGTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR TCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAAAGCTCCTTTAGAGTaGCCACTTCTTAATTCAAGG +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEKAPLE*PLLNSR
Trigger: CCTTGAATTAAGAAGTGGTCACTCTAAAGGAGCTTT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR GCA 90 bp GATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAAAGTGTCCATGGAGCTTaGGGGCTGGGCGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: DEYIMVQAHIGTLYHNEKSVHGA*GLGADG
Trigger: ACCATCAGCGCCCAGCCCGCAAGCTCCATGGACACT...TTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCATC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR GCA 90 bp AGAGGAAAATATCTTAATGACCTAGGGGTAGAGAAGGACTTCTTAGGAGAAGCATCCCAGCCTTTCCAATaGAGCTCCTCAGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: RGKYLNDLGVEKDFLGEASQPFQ*SSSATS
Trigger: TGAGGTGGCTGAGGAGCTGCATTGGAAAGGCTGGGA...TGCTTCTCCTAAGAAGTCCTTCTCTACCCCTAGGTCATTAAGATATTTTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp GATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAAGGATGGCCACTGTGCTaGCACTCAGGCAGGATCCAC +
Preference number: 4 (lower is better)
Translates to: DEYIMVQAHIGTLYHNEKGWPLC*HSGRIH
Trigger: GTGGATCCTGCCTGAGTGCCAGCACAGTGGCCATCC...TTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGTATGGAGCTTTATCTaGCTTTTACTCTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: REYLPVHPVFPNSLISAEVWSFI*LLLSAC
Trigger: ACAAGCAGAGAGTAAAAGCCAGATAAAGCTCCATAC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409865.7
ENST00000441968.5
CDS-3UTR CCA 90 bp CTGAACCTCAGCAGAGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATAGATGGTTATGTCGCTaGTGCCGTCGAAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: LNLSRARHLQPYSYKPQHRWLCR*CRRRRT
Trigger: AGTTCTTCTTCGACGGCACCAGCGACATAACCATCT...ATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCTCTGCTGAGGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR TCA 90 bp AGAGGAAAATATCTTAATGACCTAGGGGTAGAGAAGGACTTCTTAGGAGAAGCAGTGGCACTGGGTCCTTaGTCCCTTATACTGGTACCT +
Preference number: 4 (lower is better)
Translates to: RGKYLNDLGVEKDFLGEAVALGP*SLILVP
Trigger: AGGTACCAGTATAAGGGATCAAGGACCCAGTGCCAC...TGCTTCTCCTAAGAAGTCCTTCTCTACCCCTAGGTCATTAAGATATTTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR TCA 90 bp CTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGACTCTGTAACCTAAATATCTaGCAGGCTGAACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLKRSDVVPSLEMKRSGLCNLNI*QAEPQQ
Trigger: CTGCTGAGGTTCAGCCTGTCAGATATTTAGGTTACA...GAGTCCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR GCA 90 bp GATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAAGCAGGCACTCATGGCTaGACTGCTGTCGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: DEYIMVQAHIGTLYHNEKAGTHG*TAVVDG
Trigger: GCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGC...TTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR GCA 90 bp ATTCTTTTCATACTAAGTCTTGAAATCCAGGGTGCATTTTACACTCACGGCACGTGGTTATGTCGCTGGTaGCGTCGAAGAAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: ILFILSLEIQGAFYTHGTWLCRW*RRRRTR
Trigger: CCGAGTTCTTCTTCGACGGCACCAGCGACATAACCA...CGTGCCGTGAGTGTAAAATGCACCCTGGATTTCAAGACTTAGTATGAAAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CCA 90 bp AACTGGACACATATACACGAATGCCAACAGTCCCAAATAGAAACAGCCCAAACTGAACCAGATTCCTTGTaGTCTCCTTTCCTAGCTCCC +
Preference number: 4 (lower is better)
Translates to: NWTHIHECQQSQIETAQTEPDSL*SPFLAP
Trigger: GGGAGCTAGGAAAGGAGACCACAAGGAATCTGGTTC...AGTTTGGGCTGTTTCTATTTGGGACTGTTGGCATTCGTGTATATGTGTCCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR GCA 90 bp AACTGGACACATATACACGAATGCCAACAGTCCCAAATAGAAACAGCCCAAACTCCGCAATTCTACTCCTaGGTCTATTCCCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: NWTHIHECQQSQIETAQTPQFYS*VYSPEK
Trigger: CTTTTCTGGGGAATAGACGCAGGAGTAGAATTGCGG...AGTTTGGGCTGTTTCTATTTGGGACTGTTGGCATTCGTGTATATGTGTCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp GATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAAACGGAGCTTGGAGCCTaGGTGAGCATCATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: DEYIMVQAHIGTLYHNEKTELGA*VSIMSL
Trigger: CAAGGACATGATGCTCACCCAGGCTCCAAGCTCCGT...TTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCATC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp AGAGGAAAATATCTTAATGACCTAGGGGTAGAGAAGGACTTCTTAGGAGAAGCATCTCTCCTGCTTCTTTaGGGAGTGCATCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: RGKYLNDLGVEKDFLGEASLLLL*GVHLSV
Trigger: GACACTCAGATGCACTCCCCAAAGAAGCAGGAGAGA...TGCTTCTCCTAAGAAGTCCTTCTCTACCCCTAGGTCATTAAGATATTTTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp AGAGGAAAATATCTTAATGACCTAGGGGTAGAGAAGGACTTCTTAGGAGAAGCATCAAGGCTGTGGCACTaGGTCCTTGATCCCTTATAC +
Preference number: 4 (lower is better)
Translates to: RGKYLNDLGVEKDFLGEASRLWH*VLDPLY
Trigger: GTATAAGGGATCAAGGACCCAGTGCCACAGCCTTGA...TGCTTCTCCTAAGAAGTCCTTCTCTACCCCTAGGTCATTAAGATATTTTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR GCA 90 bp ATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAATTCACGGTGTGGTTCCTaGTGTTCCTGGACCTCACGA +
Preference number: 4 (lower is better)
Translates to: MNTLWYRHTLGHYTTMKNSRCGS*CSWTSR
Trigger: TCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGA...ATTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR GCA 90 bp ACTTTGGGAAATAGTTTGGTTTATCTACAGCAAGTGAACAGGTACATGGCCCAATTGTTCACTCTCTCCTaGTTCTTTGGGGAGTGCATC +
Preference number: 4 (lower is better)
Translates to: TLGNSLVYLQQVNRYMAQLFTLS*FFGECI
Trigger: GATGCACTCCCCAAAGAAGCAGGAGAGAGTGAACAA...TTGGGCCATGTACCTGTTCACTTGCTGTAGATAAACCAAACTATTTCCCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR GCA 90 bp ATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAATGTTTTGAAGAGAGCCTaGTTTCGGGGCTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: MNTLWYRHTLGHYTTMKNVLKRA*FRGSRL
Trigger: CAGCCTTGAGCCCCGAAAGCAGGCTCTCTTCAAAAC...ATTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR GCA 90 bp GATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAAAGATCGCCTCCATATTaGCGTCTCCATAGATACAGG +
Preference number: 4 (lower is better)
Translates to: DEYIMVQAHIGTLYHNEKRSPPY*RLHRYR
Trigger: CCTGTATCTATGGAGACGGCAATATGGAGGCGATCT...TTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCATC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp ACTTTGGGAAATAGTTTGGTTTATCTACAGCAAGTGAACAGGTACATGGCCCAATGGATGAATACATTATaGTACAGGCACACATTGGGA +
Preference number: 4 (lower is better)
Translates to: TLGNSLVYLQQVNRYMAQWMNTL*YRHTLG
Trigger: TCCCAATGTGTGCCTGTACCATAATGTATTCATCCA...TTGGGCCATGTACCTGTTCACTTGCTGTAGATAAACCAAACTATTTCCCAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp ATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAATAGCCTTCATAGTACCTaGTATTCCCCAGAAAAACTC +
Preference number: 4 (lower is better)
Translates to: MNTLWYRHTLGHYTTMKNSLHST*YSPEKL
Trigger: GAGTTTTTCTGGGGAATACCAGGTACTATGAAGGCT...ATTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp ATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAATCTTGATCCCTTATACTaGTACCTGTACTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: MNTLWYRHTLGHYTTMKNLDPLY*YLYFIF
Trigger: GAAGATGAAGTACAGGTACCAGTATAAGGGATCAAG...ATTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR TCA 90 bp ATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAATAGACAAATCATAAGATaGGAGAAGATATCCACAACG +
Preference number: 4 (lower is better)
Translates to: MNTLWYRHTLGHYTTMKNRQIIR*EKISTT
Trigger: CGTTGTGGATATCTTCTCTCATCTTATGATTTGTCT...ATTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR TCA 90 bp ATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAATAACTTTACACTCTATTaGGAGACAGGAAAGATAACC +
Preference number: 4 (lower is better)
Translates to: MNTLWYRHTLGHYTTMKNNFTLY*ETGKIT
Trigger: GGTTATCTTTCCTGTCTCTCAATAGAGTGTAAAGTT...ATTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR GCA 90 bp GATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAATCACACATGAAGAAATaGAAAGTGTCAATAACCTAC +
Preference number: 4 (lower is better)
Translates to: DEYIMVQAHIGTLYHNEKSHMKK*KVSITY
Trigger: GTAGGTTATTGACACTTTGCATTTCTTCATGTGTGA...TTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295729.6
3UTR CAA 72 bp TCATTCTGGATGAATACATTATGGTACAGGCACACATaGGGACACTATACCACAATGAAAAATAATGGATTA +
Preference number: 4 (lower is better)
Translates to: SFWMNTLWYRHT*GHYTTMKNNGL
Trigger: TAATCCATTATTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCATCCAGAATGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CCA 90 bp ATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAATGAAATCCATGCACTTTaGGAAATAGTTTGGTTTATC +
Preference number: 4 (lower is better)
Translates to: MNTLWYRHTLGHYTTMKNEIHAL*EIVWFI
Trigger: GATAAACCAAACTATTTCCCAAAGTGCATGGATTTC...ATTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS CCA 90 bp GGTCAGACTCCTGGGCACGCAGAACGGCGGCAGGGCGATGACGCGTaGCCGCGAGGTGAGTACCACCTCCCCGCGGCTCGCCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: GQTPGHAERRQGDDA*PRGEYHLPAARLHQ
Trigger: CTGGTGGAGGCGAGCCGCGGGGAGGTGGTACTCACCTCGCGGCCACGCGTCATCGCCCTGCCGCCGTTCTGCGTGCCCAGGAGTCTGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 90 bp AGCGTCAGGCCCCGGGCCAGGTGTGTGCGGTACCAGGTGAGGTGCTaGGGCTTCAGGATGGCTGGCTTGGTGCTGTCCGAGTGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: SVRPRARCVRYQVRC*GFRMAGLVLSEWQV
Trigger: GACCTGCCACTCGGACAGCACCAAGCCAGCCATCCTGAAGCCTCAGCACCTCACCTGGTACCGCACACACCTGGCCCGGGGCCTGACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS GCA 90 bp AGGTCGGTAGGAAGTGGCACCACCGGGTGGAGTACCTCTGCTTGCTaGGTCGGCAGCAGCGTGTCCGGGGTCAGACTCCTGGGCACGCAG +
Preference number: 5 (lower is better)
Translates to: RSVGSGTTGWSTSAC*VGSSVSGVRLLGTQ
Trigger: CTGCGTGCCCAGGAGTCTGACCCCGGACACGCTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTACCGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 90 bp GGAAGGTCGGTAGGAAGTGGCACCACCGGGTGGAGTACCTCTGCTTaGTGCGTCGGCAGCAGCGTGTCCGGGGTCAGACTCCTGGGCACG +
Preference number: 5 (lower is better)
Translates to: GRSVGSGTTGWSTSA*CVGSSVSGVRLLGT
Trigger: CGTGCCCAGGAGTCTGACCCCGGACACGCTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTACCGACCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp GGCGCGGGCATTTACGGAAGGTCGGTAGGAAGTGGCACCACCGGGTaGAGTACCTCTGCTTGCTGCGTCGGCAGCAGCGTGTCCGGGGTC +
Preference number: 5 (lower is better)
Translates to: GAGIYGRSVGSGTTG*STSACCVGSSVSGV
Trigger: GACCCCGGACACGCTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTACCGACCTTCCGTAAATGCCCGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp GCTGCAGGGATGGTGGGCGGCAGATCAGCCTGTGGCAGGGCAGGGTaGCCCGTAGGCCGACACAGAACATCCCCTCCGCTTTCTCAAACC +
Preference number: 5 (lower is better)
Translates to: AAGMVGGRSACGRAG*PVGRHRTSPPLSQT
Trigger: GGTTTGAGAAAGCGGAGGGGATGTTCTGTGTCGGCCTACGGGCCACCCTGCCCTGCCACAGGCTGATCTGCCGCCCACCATCCCTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000453220.5
CDS CCA 90 bp GTCGGAGAGGCTGGGCGCGGGCATTTACGGAAGGTCGGTAGGAAGTaGCACCACCGGGTGGAGTACCTCTGCTTGCTGCGTCGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: VGEAGRGHLRKVGRK*HHRVEYLCLLRRQQ
Trigger: CTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTACCGACCTTCCGTAAATGCCCGCGCCCAGCCTCTCCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS-3UTR CAA 90 bp GCCCAGCCTCCACTAAGCTGGGGCTCCGTCAGGCGGGCTCCAGCAACGAGGCAGGCTGAGTCCTTAACCTaGCTGACCCTCAGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: AQPPLSWGSVRRAPATRQAESLT*LTLSLP
Trigger: AGGGAGGCTGAGGGTCAGCAAGGTTAAGGACTCAGC...CTGCCTCGTTGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGGAGGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS GCA 90 bp GGAGCTTGCGGGCTGGGCGCTGATGGTGCTGCAGGCACTCATGGCTaGACTGCTGTCGTTGATGGCAGGGATGGCCACTGTGCTGGCACT +
Preference number: 5 (lower is better)
Translates to: GACGLGADGAAGTHG*TAVVDGRDGHCAGT
Trigger: AGTGCCAGCACAGTGGCCATCCCTGCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGCAGCACCATCAGCGCCCAGCCCGCAAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295729.6
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000436631.5
ENST00000441968.5
ENST00000453220.5
ENST00000457968.5
ENST00000458526.1
ENST00000462848.5
ENST00000463683.1
CDS GCA 90 bp TGGATTAGCCCCCTGGAGGGCTGGACAGCCAGCAGCTTTCGATGCTaGTCAGAGACCCTCCACTCGAACTGCAGGGGCAGACGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: WISPLEGWTASSFRC*SETLHSNCRGRREG
Trigger: CCCCTCGCGTCTGCCCCTGCAGTTCGAGTGGAGGGTCTCTGAGCAGCATCGAAAGCTGCTGGCTGTCCAGCCCTCCAGGGGGCTAATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 90 bp GGCTGGATTAGCCCCCTGGAGGGCTGGACAGCCAGCAGCTTTCGATaGTGCTCAGAGACCCTCCACTCGAACTGCAGGGGCAGACGCGAG +
Preference number: 5 (lower is better)
Translates to: GWISPLEGWTASSFR*CSETLHSNCRGRRE
Trigger: CTCGCGTCTGCCCCTGCAGTTCGAGTGGAGGGTCTCTGAGCAGCATCGAAAGCTGCTGGCTGTCCAGCCCTCCAGGGGGCTAATCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 90 bp GGTCCAGCTGCAGAGCGAGGGGGTGGTTGTCAACGGCCTCAGGGCTaGCCTGCTCCAGGTAGAGGCGGTAATAGAGGGTGCAGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: GPAAERGGGCQRPQG*PAPGRGGNRGCSCR
Trigger: ACGGCAACTGCACCCTCTATTACCGCCTCTACCTGGAGCAGGGCAGCCCTGAGGCCGTTGACAACCACCCCCTCGCTCTGCAGCTGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 90 bp TTACGGAAGGTCGGTAGGAAGTGGCACCACCGGGTGGAGTACCTCTaGTTGCTGCGTCGGCAGCAGCGTGTCCGGGGTCAGACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LRKVGRKWHHRVEYL*LLRRQQRVRGQTPG
Trigger: CCCAGGAGTCTGACCCCGGACACGCTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTACCGACCTTCCGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 90 bp CTGGCACGCAGAGGATGGAGCCTGAAGCTGCCCTCGGTCACTTCCTaGCACCCCACCAAGCCACTCAGGCTCCTAGCAGAGACCCCGCAT +
Preference number: 5 (lower is better)
Translates to: LARRGWSLKLPSVTS*HPTKPLRLLAETPH
Trigger: ATGCGGGGTCTCTGCTAGGAGCCTGAGTGGCTTGGTGGGGTGGCAGGAAGTGACCGAGGGCAGCTTCAGGCTCCATCCTCTGCGTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 90 bp CAGGCGCATGGCCATGGACTTGAGTGGGGGCACGTCGCAGCTCTCTaGAGTCACCCAGAAGGGGCAGTCAGACCTTCGCGTCCAGACCAC +
Preference number: 5 (lower is better)
Translates to: QAHGHGLEWGHVAAL*SHPEGAVRPSRPDH
Trigger: GTGGTCTGGACGCGAAGGTCTGACTGCCCCTTCTGGGTGACTCCAGAGAGCTGCGACGTGCCCCCACTCAAGTCCATGGCCATGCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 90 bp CACCAGCCGGAGCATGTAGTGGGTGGTGGCAGCGGGGTTGGCATTTaGGGACAGGCCGGCTTCCCAGACCCACATCCCCACTTGGAACAG +
Preference number: 5 (lower is better)
Translates to: HQPEHVVGGGSGVGI*GQAGFPDPHPHLEQ
Trigger: CTGTTCCAAGTGGGGATGTGGGTCTGGGAAGCCGGCCTGTCCCCAAATGCCAACCCCGCTGCCACCACCCACTACATGCTCCGGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp TACTGGGACCGCTGCTTGGGACAGGCAGTCAGGCAGATGGTGTCCTaGGACCGGGGTGGCATGCTCCCCTCTGTTCGGTCCAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: YWDRCLGQAVRQMVS*DRGGMLPSVRSSCR
Trigger: TCTGCAGCTGGACCGAACAGAGGGGAGCATGCCACCCCGGTCCCAGGACACCATCTGCCTGACTGCCTGTCCCAAGCAGCGGTCCCAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp TCCAGGAGTACTGGGACCGCTGCTTGGGACAGGCAGTCAGGCAGATaGTGTCCTGGGACCGGGGTGGCATGCTCCCCTCTGTTCGGTCCA +
Preference number: 5 (lower is better)
Translates to: SRSTGTAAWDRQSGR*CPGTGVACSPLFGP
Trigger: TGGACCGAACAGAGGGGAGCATGCCACCCCGGTCCCAGGACACCATCTGCCTGACTGCCTGTCCCAAGCAGCGGTCCCAGTACTCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp GAGGTGAGTACCACCTCCCCGCGGCTCGCCTCCACCAGGATGTTCTaGATCATGTTCTCCAGCAGCGCCTCCTGCAGGTTGGCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: EVSTTSPRLASTRMF*IMFSSSASCRLAKA
Trigger: GGCCTTCGCCAACCTGCAGGAGGCGCTGCTGGAGAACATGATCCAGAACATCCTGGTGGAGGCGAGCCGCGGGGAGGTGGTACTCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS-3UTR CAA 90 bp CCACTAAGCTGGGGCTCCGTCAGGCGGGCTCCAGCAACGAGGCAGTGCGTACTAACGGAAGGTGGGGCCTaGAATGGTGCGGCCCCGAAA +
Preference number: 5 (lower is better)
Translates to: PLSWGSVRRAPATRQCVLTEGGA*NGAAPK
Trigger: TTTCGGGGCCGCACCATTCAAGGCCCCACCTTCCGT...TAGTACGCACTGCCTCGTTGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS CCA 90 bp GTGGTTCATCAGGCACAGGGGTACAGGGTTGGGGGCCTCAGGCCCTaGGCAGGCACCGAAGTCTACCTCGACAGGCTCTACACTGATGGG +
Preference number: 5 (lower is better)
Translates to: VVHQAQGYRVGGLRP*AGTEVYLDRLYTDG
Trigger: CCCATCAGTGTAGAGCCTGTCGAGGTAGACTTCGGTGCCTGCCCAGGGCCTGAGGCCCCCAACCCTGTACCCCTGTGCCTGATGAACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 90 bp GAAGGGAGGTGGTACTCTCAGGGCCAGGCTACAGGCCCAGAGCCCTaGCAGCCTGAGCAGAACTCCAGCATCACTGGATGCCAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: EGRWYSQGQATGPEP*QPEQNSSITGCQWD
Trigger: GTCCCACTGGCATCCAGTGATGCTGGAGTTCTGCTCAGGCTGCCAGGGCTCTGGGCCTGTAGCCTGGCCCTGAGAGTACCACCTCCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
CDS-3UTR CAA 90 bp CCCACCAGAGACCCTCAACTTGCCCCCATTCAGGCCCAGCCTCCACTAAGCTGGCCAGAGACCCTCAACTaGCCCCCATTCAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PTRDPQLAPIQAQPPLSWPETLN*PPFRPS
Trigger: GCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTGG...CCAGCTTAGTGGAGGCTGGGCCTGAATGGGGGCAAGTTGAGGGTCTCTGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS TCA 90 bp TGGTGGTGGATGAGACAGGCCACACGCCGAAAGCAGATGATGGGGTaGGTGGGCTGGAAGGCACAGTGCAGGGTCATACGGGCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: WWWMRQATRRKQMMG*VGWKAQCRVIRALP
Trigger: GGGCAAGGCCCGTATGACCCTGCACTGTGCCTTCCAGCCCACTCACCCCATCATCTGCTTTCGGCGTGTGGCCTGTCTCATCCACCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS GCA 90 bp CAGAAAAAGGCCTCAGTCGTATCTCCCACAGCACACATGGGCAGCTaGAGGGATGGTGGGCGGCAGATCAGCCTGTGGCAGGGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: QKKASVVSPTAHMGS*RDGGRQISLWQGRV
Trigger: CACCCTGCCCTGCCACAGGCTGATCTGCCGCCCACCATCCCTGCAGCTGCCCATGTGTGCTGTGGGAGATACGACTGAGGCCTTTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000453220.5
CDS GCA 90 bp GCCTCCACCAGGATGTTCTGGATCATGTTCTCCAGCAGCGCCTCCTaGAGGTTGGCGAAGGCCGGGAGCCTTCTGATGGCCTCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: ASTRMFWIMFSSSAS*RLAKAGSLLMASFS
Trigger: CGAGAAGGAGGCCATCAGAAGGCTCCCGGCCTTCGCCAACCTGCAGGAGGCGCTGCTGGAGAACATGATCCAGAACATCCTGGTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp CAGGTGTGTGCGGTACCAGGTGAGGTGCTGAGGCTTCAGGATGGCTaGCTTGGTGCTGTCCGAGTGGCAGGTCCCCATCAGGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: QVCAVPGEVLRLQDG*LGAVRVAGPHQVQE
Trigger: TTCCTGGACCTGATGGGGACCTGCCACTCGGACAGCACCAAGCCAGCCATCCTGAAGCCTCAGCACCTCACCTGGTACCGCACACACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 90 bp GCCACAAGGCCCGAAGTGGGCCGAAGGATGACGTCTGAGCCTCTCTaGGGGGCCAGGCTGAAGGTCAGCAGCTTGCAGTCTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: ATRPEVGRRMTSEPL*GARLKVSSLQSLLT
Trigger: GGTCAACAAAGACTGCAAGCTGCTGACCTTCAGCCTGGCCCCCCAGAGAGGCTCAGACGTCATCCTTCGGCCCACTTCGGGCCTTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS-3UTR CAA 90 bp GATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACCTTGGCCTCTGGCGCATGGCCATGGACTaGAGTGGGGGCACGTCGCAG +
Preference number: 5 (lower is better)
Translates to: DLDRTALLFSGPQDLGLWRMAMD*SGGTSQ
Trigger: CTGCGACGTGCCCCCACTCAAGTCCATGGCCATGCG...CCAGAGGCCAAGGTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CAA 90 bp TCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAACTGGGCCCCAAGACCTaGGCCTCTGGGCAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: SPHCQSIRTGATKASTLELGPKT*ASGQGQ
Trigger: CTGCCCTTGCCCAGAGGCCAAGGTCTTGGGGCCCAG...TTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS GCA 90 bp CGGCCTCAGGGCTGCCCTGCTCCAGGTAGAGGCGGTAATAGAGGGTaGAGTTGCCGTCATTCAGGAGGACAAGGAACCTGGACTGCTTGC +
Preference number: 5 (lower is better)
Translates to: RPQGCPAPGRGGNRG*SCRHSGGQGTWTAC
Trigger: GCAAGCAGTCCAGGTTCCTTGTCCTCCTGAATGACGGCAACTGCACCCTCTATTACCGCCTCTACCTGGAGCAGGGCAGCCCTGAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 90 bp GGCCCAGAGCCCTGGCAGCCTGAGCAGAACTCCAGCATCACTGGATaGCAGTGGGACTGGGATCTCCAGGTAGTCACGGATGATTCCCCA +
Preference number: 5 (lower is better)
Translates to: GPEPWQPEQNSSITG*QWDWDLQVVTDDSP
Trigger: TGGGGAATCATCCGTGACTACCTGGAGATCCCAGTCCCACTGGCATCCAGTGATGCTGGAGTTCTGCTCAGGCTGCCAGGGCTCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
CDS CCA 90 bp CAGTCAGACCTTCGCGTCCAGACCACCATGATCTTGCCCTTGGTGTaGTTCATCAGGCACAGGGGTACAGGGTTGGGGGCCTCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: QSDLRVQTTMILPLV*FIRHRGTGLGASGP
Trigger: AGGGCCTGAGGCCCCCAACCCTGTACCCCTGTGCCTGATGAACCACACCAAGGGCAAGATCATGGTGGTCTGGACGCGAAGGTCTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 90 bp GTTGCCACTGCCATTGCATGGACTCCTGGGACTCAGGCTGTGGTGTaGGCCCGATGCCCGCCCAGCTCACTTTCTCTTCCTTCTCATCCC +
Preference number: 5 (lower is better)
Translates to: VATAIAWTPGTQAVV*ARCPPSSLSLPSHP
Trigger: GGGATGAGAAGGAAGAGAAAGTGAGCTGGGCGGGCATCGGGCCCACACCACAGCCTGAGTCCCAGGAGTCCATGCAATGGCAGTGGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp CTGCTGTTGCCACTGCCATTGCATGGACTCCTGGGACTCAGGCTGTaGTGTGGGCCCGATGCCCGCCCAGCTCACTTTCTCTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LLLPLPLHGLLGLRL*CGPDARPAHFLFLL
Trigger: GAGAAGGAAGAGAAAGTGAGCTGGGCGGGCATCGGGCCCACACCACAGCCTGAGTCCCAGGAGTCCATGCAATGGCAGTGGCAACAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp ACCATGACATTCAGCTGCTGTTGCCACTGCCATTGCATGGACTCCTaGGACTCAGGCTGTGGTGTGGGCCCGATGCCCGCCCAGCTCACT +
Preference number: 5 (lower is better)
Translates to: TMTFSCCCHCHCMDS*DSGCGVGPMPAQLT
Trigger: AGTGAGCTGGGCGGGCATCGGGCCCACACCACAGCCTGAGTCCCAGGAGTCCATGCAATGGCAGTGGCAACAGCAGCTGAATGTCATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp GAGCCCTGGCAGCCTGAGCAGAACTCCAGCATCACTGGATGCCAGTaGGACTGGGATCTCCAGGTAGTCACGGATGATTCCCCACAGGGC +
Preference number: 5 (lower is better)
Translates to: EPWQPEQNSSITGCQ*DWDLQVVTDDSPQG
Trigger: GCCCTGTGGGGAATCATCCGTGACTACCTGGAGATCCCAGTCCCACTGGCATCCAGTGATGCTGGAGTTCTGCTCAGGCTGCCAGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
CDS CCA 90 bp GGCACCATGAGGAATGAGGCTGTACACGAGATCCAGGGCTTTGCCTaGGAGCCCAGGGACTCACCCTCAGGGAAGGCACTCCAAAGAGGG +
Preference number: 5 (lower is better)
Translates to: GTMRNEAVHEIQGFA*EPRDSPSGKALQRG
Trigger: CCCTCTTTGGAGTGCCTTCCCTGAGGGTGAGTCCCTGGGCTCCCAGGCAAAGCCCTGGATCTCGTGTACAGCCTCATTCCTCATGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS TCA 90 bp TGCTTCCCAGCTCTGGCAACAGGTGCTACCTGGCACCATGAGGAATaGGGCTGTACACGAGATCCAGGGCTTTGCCTGGGAGCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: CFPALATGATWHHEE*GCTRDPGLCLGAQG
Trigger: TCCCTGGGCTCCCAGGCAAAGCCCTGGATCTCGTGTACAGCCTCATTCCTCATGGTGCCAGGTAGCACCTGTTGCCAGAGCTGGGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS TCA 90 bp GAGGGTCTGCTTCCCAGCTCTGGCAACAGGTGCTACCTGGCACCATaGGGAATGAGGCTGTACACGAGATCCAGGGCTTTGCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: EGLLPSSGNRCYLAP*GMRLYTRSRALPGS
Trigger: GCTCCCAGGCAAAGCCCTGGATCTCGTGTACAGCCTCATTCCTCATGGTGCCAGGTAGCACCTGTTGCCAGAGCTGGGAAGCAGACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS GCA 90 bp TGGAAGTGGGCCGTGCAGTCCGATTGGTTCTCAATCCACAGGGGCTaGTCGGAGCGCTCCCCAAGGTTGACCCAGCTGAAGTTGACACAG +
Preference number: 5 (lower is better)
Translates to: WKWAVQSDWFSIHRG*SERSPRLTQLKLTQ
Trigger: CTGTGTCAACTTCAGCTGGGTCAACCTTGGGGAGCGCTCCGAGCAGCCCCTGTGGATTGAGAACCAATCGGACTGCACGGCCCACTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS GCA 90 bp TGCTCCTCCTTCACCATGACATTCAGCTGCTGTTGCCACTGCCATTaGATGGACTCCTGGGACTCAGGCTGTGGTGTGGGCCCGATGCCC +
Preference number: 5 (lower is better)
Translates to: CSSFTMTFSCCCHCH*MDSWDSGCGVGPMP
Trigger: GGGCATCGGGCCCACACCACAGCCTGAGTCCCAGGAGTCCATGCAATGGCAGTGGCAACAGCAGCTGAATGTCATGGTGAAGGAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp CGCCTCCAGAGGCCGGAAGACGATGGGGAGCGTGAGGGTTATGCCTaGGCTCAGGAAGATGGGCTGAGGGATGACCGTGAAGAAGAACTT +
Preference number: 5 (lower is better)
Translates to: RLQRPEDDGEREGYA*AQEDGLRDDREEEL
Trigger: AAGTTCTTCTTCACGGTCATCCCTCAGCCCATCTTCCTGAGCCCAGGCATAACCCTCACGCTCCCCATCGTCTTCCGGCCTCTGGAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000457968.5
ENST00000462848.5
CDS CCA 90 bp TCTCCCGGAAGCACGATGCCATGGGCCGTGGGGCATGAGAAGGCCTaGTCTTCGGCCAGTTCATCCGGGGAAATTTCAATCCTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SPGSTMPWAVGHEKA*SSASSSGEISILKG
Trigger: CCCCTTCAGGATTGAAATTTCCCCGGATGAACTGGCCGAAGACCAGGCCTTCTCATGCCCCACGGCCCATGGCATCGTGCTTCCGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
CDS CCA 90 bp CCGACACACATTTCTTCTCTCCCGGAAGCACGATGCCATGGGCCGTaGGGCATGAGAAGGCCTGGTCTTCGGCCAGTTCATCCGGGGAAA +
Preference number: 5 (lower is better)
Translates to: PTHISSLPEARCHGP*GMRRPGLRPVHPGK
Trigger: TTTCCCCGGATGAACTGGCCGAAGACCAGGCCTTCTCATGCCCCACGGCCCATGGCATCGTGCTTCCGGGAGAGAAGAAATGTGTGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
CDS CCA 90 bp TCCAAGCAGTCGATGGCAAACTGGAAGTGGGCCGTGCAGTCCGATTaGTTCTCAATCCACAGGGGCTGCTCGGAGCGCTCCCCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: SKQSMANWKWAVQSD*FSIHRGCSERSPRL
Trigger: CAACCTTGGGGAGCGCTCCGAGCAGCCCCTGTGGATTGAGAACCAATCGGACTGCACGGCCCACTTCCAGTTTGCCATCGACTGCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 90 bp TGGCAGCCTGAGCAGAACTCCAGCATCACTGGATGCCAGTGGGACTaGGATCTCCAGGTAGTCACGGATGATTCCCCACAGGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: WQPEQNSSITGCQWD*DLQVVTDDSPQGHQ
Trigger: CTGGTGGCCCTGTGGGGAATCATCCGTGACTACCTGGAGATCCCAGTCCCACTGGCATCCAGTGATGCTGGAGTTCTGCTCAGGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
CDS-3UTR CAA 90 bp GATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACCTTGGCCTCTGGGGCCGTGCAGTCCGATaGGTTCTCAATCCACAGGGG +
Preference number: 5 (lower is better)
Translates to: DLDRTALLFSGPQDLGLWGRAVR*VLNPQG
Trigger: CCCCTGTGGATTGAGAACCAATCGGACTGCACGGCC...CCAGAGGCCAAGGTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CAA 90 bp CACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAGCCTCAGGGTCATACGGGCCTaGCCCACCAGCGTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: HCQSIRTGATKASTLESLRVIRA*PTSVPK
Trigger: CTTTGGGACGCTGGTGGGCAAGGCCCGTATGACCCT...GAGGCTTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CAA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACGCATGGCCATGGACTaGAGTGGGGGCACGTCGCAG +
Preference number: 5 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRRMAMD*SGGTSQ
Trigger: CTGCGACGTGCCCCCACTCAAGTCCATGGCCATGCG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp GCTGGGGCTCCGTCAGGCGGGCTCCAGCAACGAGGCAGTGCGTACTATGTAGAAGGTGCGGCCCCGAAATaGAAGTCAAGCCTTAAAGGG +
Preference number: 5 (lower is better)
Translates to: AGAPSGGLQQRGSAYYVEGAAPK*KSSLKG
Trigger: CCCTTTAAGGCTTGACTTCAATTTCGGGGCCGCACC...TTCTACATAGTACGCACTGCCTCGTTGCTGGAGCCCGCCTGACGGAGCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS TCA 90 bp GGTTCCTGCTGTTCCTGGACCTCACGACGGAGCTTGGAGCCTGGGTaGGCATCATGTCCTTGGGACACAGTCCAAAGGGAGCACTCTGAG +
Preference number: 5 (lower is better)
Translates to: GSCCSWTSRRSLEPG*ASCPWDTVQREHSE
Trigger: CTCAGAGTGCTCCCTTTGGACTGTGTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295729.6
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000436631.5
ENST00000441968.5
ENST00000453220.5
ENST00000457968.5
ENST00000458526.1
ENST00000462848.5
ENST00000463683.1
CDS TCA 90 bp GAGTCACCCAGAAGGGGCAGTCAGACCTTCGCGTCCAGACCACCATaGTCTTGCCCTTGGTGTGGTTCATCAGGCACAGGGGTACAGGGT +
Preference number: 5 (lower is better)
Translates to: ESPRRGSQTFASRPP*SCPWCGSSGTGVQG
Trigger: ACCCTGTACCCCTGTGCCTGATGAACCACACCAAGGGCAAGATCATGGTGGTCTGGACGCGAAGGTCTGACTGCCCCTTCTGGGTGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS TCA 90 bp GATGTGTATGGGCACGTCCACCGTGTAGGTCTTGGCCTCGATAGGTaGGAAGATCCACAAGACCCGGGCAGTGCTGCCTGGCTGGATCTC +
Preference number: 5 (lower is better)
Translates to: DVYGHVHRVGLGLDR*EDPQDPGSAAWLDL
Trigger: GAGATCCAGCCAGGCAGCACTGCCCGGGTCTTGTGGATCTTCTCACCTATCGAGGCCAAGACCTACACGGTGGACGTGCCCATACACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 90 bp TTCCCAACCCTGGATAGTGCTCTGGTCTGTCTTCCTTCGGCTGCTTaGCCTTCCCATCCTCCCAGCTGCTGGAGGGTACAGGCAGGATTG +
Preference number: 5 (lower is better)
Translates to: FPTLDSALVCLPSAA*PSHPPSCWRVQAGL
Trigger: CAATCCTGCCTGTACCCTCCAGCAGCTGGGAGGATGGGAAGGGCAAGCAGCCGAAGGAAGACAGACCAGAGCACTATCCAGGGTTGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp GTGTGGTTCCTGCTGTTCCTGGACCTCACGACGGAGCTTGGAGCCTaGGTGAGCATCATGTCCTTGGGACACAGTCCAAAGGGAGCACTC +
Preference number: 5 (lower is better)
Translates to: VWFLLFLDLTTELGA*VSIMSLGHSPKGAL
Trigger: GAGTGCTCCCTTTGGACTGTGTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295729.6
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000436631.5
ENST00000441968.5
ENST00000453220.5
ENST00000457968.5
ENST00000458526.1
ENST00000462848.5
ENST00000463683.1
CDS CCA 90 bp GTTCACGGTGTGGTTCCTGCTGTTCCTGGACCTCACGACGGAGCTTaGAGCCTGGGTGAGCATCATGTCCTTGGGACACAGTCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: VHGVVPAVPGPHDGA*SLGEHHVLGTQSKG
Trigger: CCCTTTGGACTGTGTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295729.6
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000436631.5
ENST00000441968.5
ENST00000453220.5
ENST00000457968.5
ENST00000458526.1
ENST00000462848.5
ENST00000463683.1
CDS CCA 90 bp GCAACAGAGCCAAAGTACAACAGCTTCTGGAAGCCCTCGGCATCCTaGTCCTCCGGGCACTTGTGCTTTATGCTCACCAGCAGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: ATEPKYNSFWKPSAS*SSGHLCFMLTSSWA
Trigger: CGCCCAGCTGCTGGTGAGCATAAAGCACAAGTGCCCGGAGGACCAGGATGCCGAGGGCTTCCAGAAGCTGTTGTACTTTGGCTCTGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
CDS CCA 90 bp TTGGCATTTGGGGACAGGCCGGCTTCCCAGACCCACATCCCCACTTaGAACAGGTACTTGGTCTCCTCCAAAGGGCTGAAGGTCCACGTC +
Preference number: 5 (lower is better)
Translates to: LAFGDRPASQTHIPT*NRYLVSSKGLKVHV
Trigger: GACGTGGACCTTCAGCCCTTTGGAGGAGACCAAGTACCTGTTCCAAGTGGGGATGTGGGTCTGGGAAGCCGGCCTGTCCCCAAATGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp GAATTCAACTCTGCTTGCTCTGCCCAGAGCTCCACGTCAATCCGCTaGTCACTTGGAAGGAGGAAGGCCCAGTCCAGGGACACCACTCCG +
Preference number: 5 (lower is better)
Translates to: EFNSACSAQSSTSIR*SLGRRKAQSRDTTP
Trigger: CGGAGTGGTGTCCCTGGACTGGGCCTTCCTCCTTCCAAGTGACCAGCGGATTGACGTGGAGCTCTGGGCAGAGCAAGCAGAGTTGAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS-3UTR CAA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAGCAGCTGGGCGCACTaGGCCACAGCCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: REYLPVHPVFPNSLISAESSWAH*ATACSW
Trigger: CCAGCTGCAGGCTGTGGCCAAGTGCGCCCAGCTGCT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp CCCATTCAGGCCCAGCCTCCACTAAGCTGGGGCTCCGTCAGGCGGGCTCCAGCATGGACAAATTCAGCTTaGAACCTGGCTCTGTCCATT +
Preference number: 5 (lower is better)
Translates to: PIQAQPPLSWGSVRRAPAWTNSA*NLALSI
Trigger: AATGGACAGAGCCAGGTTCAAAGCTGAATTTGTCCA...TGCTGGAGCCCGCCTGACGGAGCCCCAGCTTAGTGGAGGCTGGGCCTGAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS GCA 90 bp ATCCTGAAGGGGGCATTTACCGCCGACGGGTTGTGTAGCCTGATCTaGCTCTCCGAGGTGCAGCCCACAGCAACAGAGCCAAAGTACAAC +
Preference number: 5 (lower is better)
Translates to: ILKGAFTADGLCSLI*LSEVQPTATEPKYN
Trigger: GTTGTACTTTGGCTCTGTTGCTGTGGGCTGCACCTCGGAGAGGCAGATCAGGCTACACAACCCGTCGGCGGTAAATGCCCCCTTCAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
CDS GCA 90 bp CTCCAGATCCTGGATGGGAATCATGAGAGCCCCGTTCTGGTCCTGTaGCAGCTTCTTCTCCTTCAGCATGGCATCCAGGATGTCAGGGGG +
Preference number: 5 (lower is better)
Translates to: LQILDGNHESPVLVL*QLLLLQHGIQDVRG
Trigger: CCCCCTGACATCCTGGATGCCATGCTGAAGGAGAAGAAGCTGGCACAGGACCAGAACGGGGCTCTCATGATTCCCATCCAGGATCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS GCA 90 bp CAGGGCTGCCCTGCTCCAGGTAGAGGCGGTAATAGAGGGTGCAGTTaGCGTCATTCAGGAGGACAAGGAACCTGGACTGCTTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: QGCPAPGRGGNRGCS*RHSGGQGTWTACCS
Trigger: TGAACAGCAAGCAGTCCAGGTTCCTTGTCCTCCTGAATGACGGCAACTGCACCCTCTATTACCGCCTCTACCTGGAGCAGGGCAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 90 bp TCCTGCACGCGCATCTGGTGGAGCTCAGTGGAATTCAACTCTGCTTaGTCTGCCCAGAGCTCCACGTCAATCCGCTGGTCACTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SCTRIWWSSVEFNSA*SAQSSTSIRWSLGR
Trigger: CCTTCCAAGTGACCAGCGGATTGACGTGGAGCTCTGGGCAGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGCGTGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 90 bp GCGAAGGCCGGGAGCCTTCTGATGGCCTCCTTCTCGTCCTGTTCTTaGTCCTCCTTCACCATGACATTCAGCTGCTGTTGCCACTGCCAT +
Preference number: 5 (lower is better)
Translates to: AKAGSLLMASFSSCS*SSFTMTFSCCCHCH
Trigger: ATGGCAGTGGCAACAGCAGCTGAATGTCATGGTGAAGGAGGAGCAAGAACAGGACGAGAAGGAGGCCATCAGAAGGCTCCCGGCCTTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp AGCTGTGGCCTCGTGCCCGCACCGTCAGGCACCAGGATGGGCACATaGTGCAGTCCTCCTCAATATTACTGTAGCTCTGCAGGACCTTAT +
Preference number: 5 (lower is better)
Translates to: SCGLVPAPSGTRMGT*CSPPQYYCSSAGPY
Trigger: ATAAGGTCCTGCAGAGCTACAGTAATATTGAGGAGGACTGCACCATGTGCCCATCCTGGTGCCTGACGGTGCGGGCACGAGGCCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp AGCGAAATAGCTGTGGCCTCGTGCCCGCACCGTCAGGCACCAGGATaGGCACATGGTGCAGTCCTCCTCAATATTACTGTAGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: SEIAVASCPHRQAPG*AHGAVLLNITVALQ
Trigger: CTGCAGAGCTACAGTAATATTGAGGAGGACTGCACCATGTGCCCATCCTGGTGCCTGACGGTGCGGGCACGAGGCCACAGCTATTTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp GGGCTTGAAGTAGAGGCTTTTGTGGGTGTCCAGCTTCAGCTGCAGTaGCTCCTCCCGGCTGTACATGCTCACCTCCTTGAGATACTGGGG +
Preference number: 5 (lower is better)
Translates to: GLEVEAFVGVQLQLQ*LLPAVHAHLLEILG
Trigger: CCCCAGTATCTCAAGGAGGTGAGCATGTACAGCCGGGAGGAGCCACTGCAGCTGAAGCTGGACACCCACAAAAGCCTCTACTTCAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp GCCTTGGGGCTGATGGAGAAGAGGCAATTGTCCTGCACGCGCATCTaGTGGAGCTCAGTGGAATTCAACTCTGCTTGCTCTGCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: ALGLMEKRQLSCTRI*WSSVEFNSACSAQS
Trigger: GCTCTGGGCAGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGCGTGCAGGACAATTGCCTCTTCTCCATCAGCCCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp CAGCTTCCCCAAGGATATCTTAGACAAAGTTCCACTGAAGGGAGGTaGTACTCTCAGGGCCAGGCTACAGGCCCAGAGCCCTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QLPQGYLRQSSTEGR*YSQGQATGPEPWQP
Trigger: AGGCTGCCAGGGCTCTGGGCCTGTAGCCTGGCCCTGAGAGTACCACCTCCCTTCAGTGGAACTTTGTCTAAGATATCCTTGGGGAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS-3UTR CAA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCGCTGCACTGCTGTCGTaGATGGCAGGGATGGCCACT +
Preference number: 5 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLAALLS*MAGMAT
Trigger: AGTGGCCATCCCTGCCATCAACGACAGCAGTGCAGC...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp TCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAATTTACCGCCGACGGGTaGTGTAGCCTGATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SPHCQSIRTGATKASTLEFTADG*CSLICL
Trigger: GAGGCAGATCAGGCTACACAACCCGTCGGCGGTAAA...TTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS TCA 90 bp GCTTCTCCCCAGCCTTGTTATCTCTGTGGGAAAGGAGAGAGTAGGTaGTGGTCCAGGAGTACTGGGACCGCTGCTTGGGACAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: ASPQPCYLCGKGESR*WSRSTGTAAWDRQS
Trigger: TGACTGCCTGTCCCAAGCAGCGGTCCCAGTACTCCTGGACCATCACCTACTCTCTCCTTTCCCACAGAGATAACAAGGCTGGGGAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 90 bp AGAGCAGAGGGGAGAGGAGACAGGAGTGACATGAGAAAGAGAGGCTaGGGGAGGAGACTCTCATGGCCATCCTTGTCATGGAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: RAEGRGDRSDMRKRG*GRRLSWPSLSWRRG
Trigger: CCCTCTCCTCCATGACAAGGATGGCCATGAGAGTCTCCTCCCTCAGCCTCTCTTTCTCATGTCACTCCTGTCTCCTCTCCCCTCTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS GCA 90 bp ATTGTCCTGCACGCGCATCTGGTGGAGCTCAGTGGAATTCAACTCTaGTTGCTCTGCCCAGAGCTCCACGTCAATCCGCTGGTCACTTGG +
Preference number: 5 (lower is better)
Translates to: IVLHAHLVELSGIQL*LLCPELHVNPLVTW
Trigger: CCAAGTGACCAGCGGATTGACGTGGAGCTCTGGGCAGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGCGTGCAGGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 90 bp ACTCAGGCTCCTAGCAGAGACCCCGCATTCCTCCCTCTCATTGCGTaGACACACCTTATAGATGGCGAAGGCTTCGAGCTCCACCGTGTA +
Preference number: 5 (lower is better)
Translates to: TQAPSRDPAFLPLIA*THLIDGEGFELHRV
Trigger: TACACGGTGGAGCTCGAAGCCTTCGCCATCTATAAGGTGTGTGCACGCAATGAGAGGGAGGAATGCGGGGTCTCTGCTAGGAGCCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 90 bp GCAGGCCTGATGGTAAAGACACTCTCCAAGCAGTCGATGGCAAACTaGAAGTGGGCCGTGCAGTCCGATTGGTTCTCAATCCACAGGGGC +
Preference number: 5 (lower is better)
Translates to: AGLMVKTLSKQSMAN*KWAVQSDWFSIHRG
Trigger: GCCCCTGTGGATTGAGAACCAATCGGACTGCACGGCCCACTTCCAGTTTGCCATCGACTGCTTGGAGAGTGTCTTTACCATCAGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 90 bp TTGGGGCTGATGGAGAAGAGGCAATTGTCCTGCACGCGCATCTGGTaGAGCTCAGTGGAATTCAACTCTGCTTGCTCTGCCCAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LGLMEKRQLSCTRIW*SSVEFNSACSAQSS
Trigger: GGAGCTCTGGGCAGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGCGTGCAGGACAATTGCCTCTTCTCCATCAGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp ACTGTAGAAGCTGGCATGCACAGAGGCCCTCAAGGTCACCACAAATaGGACCGTCTCTTCAGGAGCCACCACCCCTATCATGGGACTCAC +
Preference number: 5 (lower is better)
Translates to: TVEAGMHRGPQGHHK*DRLFRSHHPYHGTH
Trigger: GTGAGTCCCATGATAGGGGTGGTGGCTCCTGAAGAGACGGTCCCATTTGTGGTGACCTTGAGGGCCTCTGTGCATGCCAGCTTCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp GCTGCTGCGAGTACAGCTTGCATACCAGGTCTGCACTGTAGAAGCTaGCATGCACAGAGGCCCTCAAGGTCACCACAAATGGGACCGTCT +
Preference number: 5 (lower is better)
Translates to: AAASTACIPGLHCRS*HAQRPSRSPQMGPS
Trigger: AGACGGTCCCATTTGTGGTGACCTTGAGGGCCTCTGTGCATGCCAGCTTCTACAGTGCAGACCTGGTATGCAAGCTGTACTCGCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp TTTGGGGTCTGCAGTTTCCAGCTGGCAGGCCGGCTGACAGACTGCTaGTTCTTGATGGGAGGCAGTGTCTTGTACTTCCTCGCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: FGVCSFQLAGRLTDC*FLMGGSVLYFLAGS
Trigger: TGAACCTGCGAGGAAGTACAAGACACTGCCTCCCATCAAGAACCAGCAGTCTGTCAGCCGGCCTGCCAGCTGGAAACTGCAGACCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp TCATTCCAGAATTGGCGGAAGTACGGCACCTGCTCCACCAGGCTTTaGTCCACAGCCTCATGGAAGTTCTTGTCTTCCAGCAGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: SFQNWRKYGTCSTRL*STASWKFLSSSRPL
Trigger: CAGGGGCCTGCTGGAAGACAAGAACTTCCATGAGGCTGTGGACCAAAGCCTGGTGGAGCAGGTGCCGTACTTCCGCCAATTCTGGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp AGACCCCGCATTCCTCCCTCTCATTGCGTGCACACACCTTATAGATaGCGAAGGCTTCGAGCTCCACCGTGTAAAGGCAGTTGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: RPRIPPSHCVHTPYR*RRLRAPPCKGSWGE
Trigger: CTCACCCCAACTGCCTTTACACGGTGGAGCTCGAAGCCTTCGCCATCTATAAGGTGTGTGCACGCAATGAGAGGGAGGAATGCGGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 90 bp TCATGGCCATCCTTGTCATGGAGGAGAGGGTCTGCTTCCCAGCTCTaGCAACAGGTGCTACCTGGCACCATGAGGAATGAGGCTGTACAC +
Preference number: 5 (lower is better)
Translates to: SWPSLSWRRGSASQL*QQVLPGTMRNEAVH
Trigger: GTGTACAGCCTCATTCCTCATGGTGCCAGGTAGCACCTGTTGCCAGAGCTGGGAAGCAGACCCTCTCCTCCATGACAAGGATGGCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS-3UTR CAA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGATGGTCCTCCGGGCACTaGTGCTTTATGCTCACCAGC +
Preference number: 5 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRWSSGH*CFMLTS
Trigger: GCTGGTGAGCATAAAGCACAAGTGCCCGGAGGACCA...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp GTAAGTGACCCTGATCTTGACCGCACAGCCCTACTTTTCTCTGGGCCCCAAGACTGGTCCTCCGGGCACTaGTGCTTTATGCTCACCAGC +
Preference number: 5 (lower is better)
Translates to: VSDPDLDRTALLFSGPQDWSSGH*CFMLTS
Trigger: GCTGGTGAGCATAAAGCACAAGTGCCCGGAGGACCA...GTCTTGGGGCCCAGAGAAAAGTAGGGCTGTGCGGTCAAGATCAGGGTCACTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CAA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGATTTACCGCCGACGGGTaGTGTAGCCTGATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRFTADG*CSLICL
Trigger: GAGGCAGATCAGGCTACACAACCCGTCGGCGGTAAA...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCTGGTGTCCAGAGTCTaGGGGTGGAAGAACACCGAC +
Preference number: 5 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLLVSRV*GWKNTD
Trigger: GTCGGTGTTCTTCCACCCCAAGACTCTGGACACCAG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp CACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAAAACTTTAAGCAGGGTCTaGGAGGCACAGCCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: HPTARALGRGQPKPPLWKTLSRV*EAQPEG
Trigger: GCCTTCTGGCTGTGCCTCCAAGACCCTGCTTAAAGT...TTTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CAA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGAGGGTCATACGGGCCTaGCCCACCAGCGTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: REYLPVHPVFPNSLISAERVIRA*PTSVPK
Trigger: CTTTGGGACGCTGGTGGGCAAGGCCCGTATGACCCT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS TCA 90 bp ACATTTCTTCTCTCCCGGAAGCACGATGCCATGGGCCGTGGGGCATaGGAAGGCCTGGTCTTCGGCCAGTTCATCCGGGGAAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: TFLLSRKHDAMGRGA*EGLVFGQFIRGNFN
Trigger: ATTGAAATTTCCCCGGATGAACTGGCCGAAGACCAGGCCTTCTCATGCCCCACGGCCCATGGCATCGTGCTTCCGGGAGAGAAGAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
CDS TCA 90 bp CTTCCTCTTTGGCAGCTCCCGGTGCAAAAAGTGGCAGGGAAACTCTaGGAAGAAGTTAGCCAGAAAGTAGTCGGTGGCATGGGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: LPLWQLPVQKVAGKL*EEVSQKVVGGMGSG
Trigger: GCCCGAGCCCATGCCACCGACTACTTTCTGGCTAACTTCTTCTCAGAGTTTCCCTGCCACTTTTTGCACCGGGAGCTGCCAAAGAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 90 bp CTGGTCTGTCTTCCTTCGGCTGCTTGCCCTTCCCATCCTCCCAGCTaGTGGAGGGTACAGGCAGGATTGGCATTAAGTACAGGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: LVCLPSAACPSHPPS*WRVQAGLALSTGCF
Trigger: AAAACAGCCTGTACTTAATGCCAATCCTGCCTGTACCCTCCAGCAGCTGGGAGGATGGGAAGGGCAAGCAGCCGAAGGAAGACAGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp CTGATGGTAAAGACACTCTCCAAGCAGTCGATGGCAAACTGGAAGTaGGCCGTGCAGTCCGATTGGTTCTCAATCCACAGGGGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: LMVKTLSKQSMANWK*AVQSDWFSIHRGCS
Trigger: CGAGCAGCCCCTGTGGATTGAGAACCAATCGGACTGCACGGCCCACTTCCAGTTTGCCATCGACTGCTTGGAGAGTGTCTTTACCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 90 bp TGGAGAAGAGGCAATTGTCCTGCACGCGCATCTGGTGGAGCTCAGTaGAATTCAACTCTGCTTGCTCTGCCCAGAGCTCCACGTCAATCC +
Preference number: 5 (lower is better)
Translates to: WRRGNCPARASGGAQ*NSTLLALPRAPRQS
Trigger: GGATTGACGTGGAGCTCTGGGCAGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGCGTGCAGGACAATTGCCTCTTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp TGCCGTGGGGGTAGCGTGTCACCAATGGGAATGGGGATGAACTGGTaGGTAGTAGAGGTGAAGTGCACATACTTCTGCTCCGGCTTCACT +
Preference number: 5 (lower is better)
Translates to: CRGGSVSPMGMGMNW*VVEVKCTYFCSGFT
Trigger: AGTGAAGCCGGAGCAGAAGTATGTGCACTTCACCTCTACTACCCACCAGTTCATCCCCATTCCCATTGGTGACACGCTACCCCCACGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp ATCTGCCGTGGGGGTAGCGTGTCACCAATGGGAATGGGGATGAACTaGTGGGTAGTAGAGGTGAAGTGCACATACTTCTGCTCCGGCTTC +
Preference number: 5 (lower is better)
Translates to: ICRGGSVSPMGMGMN*WVVEVKCTYFCSGF
Trigger: GAAGCCGGAGCAGAAGTATGTGCACTTCACCTCTACTACCCACCAGTTCATCCCCATTCCCATTGGTGACACGCTACCCCCACGGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp CCTAGAGTGTATGGAACTGTTGTCCCACGAGGAGATGTTGTGGAATaGGGCTGTGTCCCCCATCATATGGGGGTTGTAGCCCACTCCCTG +
Preference number: 5 (lower is better)
Translates to: PRVYGTVVPRGDVVE*GCVPHHMGVVAHSL
Trigger: CAGGGAGTGGGCTACAACCCCCATATGATGGGGGACACAGCCCCATTCCACAACATCTCCTCGTGGGACAACAGTTCCATACACTCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp CGGAAGTACGGCACCTGCTCCACCAGGCTTTGGTCCACAGCCTCATaGAAGTTCTTGTCTTCCAGCAGGCCCCTGATTATTGTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: RKYGTCSTRLWSTAS*KFLSSSRPLIIVVR
Trigger: TCTCACCACAATAATCAGGGGCCTGCTGGAAGACAAGAACTTCCATGAGGCTGTGGACCAAAGCCTGGTGGAGCAGGTGCCGTACTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp AGAAATGTAAGCTTCCCTGGCCACTCGCGCCGCTCCCTGAGACCCTaGGACCTTGGGACTAACGCTCAGAACTTACATCGCCTCCATATT +
Preference number: 5 (lower is better)
Translates to: RNVSFPGHSRRSLRP*DLGTNAQNLHRLHI
Trigger: AATATGGAGGCGATGTAAGTTCTGAGCGTTAGTCCCAAGGTCCCAGGGTCTCAGGGAGCGGCGCGAGTGGCCAGGGAAGCTTACATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458526.1
CDS-3UTR CAA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACCCCAGATGACCCTCTaGTTCACTCTCTCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRPQMTL*FTLSCF
Trigger: GAAGCAGGAGAGAGTGAACAAGAGGGTCATCTGGGG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp CTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGACTCAGCAGCTGGGCGCACTaGGCCACAGCCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LLKRSDVVPSLEMKRSGLSSWAH*ATACSW
Trigger: CCAGCTGCAGGCTGTGGCCAAGTGCGCCCAGCTGCT...GAGTCCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CAA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGAACTTTAAGCAGGGTCTaGGAGGCACAGCCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRTLSRV*EAQPEG
Trigger: GCCTTCTGGCTGTGCCTCCAAGACCCTGCTTAAAGT...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGGCCGTGCAGTCCGATaGGTTCTCAATCCACAGGGG +
Preference number: 5 (lower is better)
Translates to: REYLPVHPVFPNSLISAEGRAVR*VLNPQG
Trigger: CCCCTGTGGATTGAGAACCAATCGGACTGCACGGCC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCAGGGTCATACGGGCCTaGCCCACCAGCGTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSRVIRA*PTSVPK
Trigger: CTTTGGGACGCTGGTGGGCAAGGCCCGTATGACCCT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTACCATGATCTTGCCCTaGGTGTGGTTCATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: QHHPTARALGRGQPKPPLTMILP*VWFIRH
Trigger: GTGCCTGATGAACCACACCAAGGGCAAGATCATGGT...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CAA 90 bp CAACATCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTCAGACCACCATGATCTaGCCCTTGGTGTGGTTCATC +
Preference number: 5 (lower is better)
Translates to: QHHPTARALGRGQPKPPLQTTMI*PLVWFI
Trigger: GATGAACCACACCAAGGGCAAGATCATGGTGGTCTG...AAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGATGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CAA 90 bp GCTGGGGCTCCGTCAGGCGGGCTCCAGCAACGAGGCAGTGCGTACTATGTAGAAGAGTTTCCCACAGGATaGGAGGAGAAAAGACTTGTA +
Preference number: 5 (lower is better)
Translates to: AGAPSGGLQQRGSAYYVEEFPTG*EEKRLV
Trigger: TACAAGTCTTTTCTCCTCCAATCCTGTGGGAAACTC...TTCTACATAGTACGCACTGCCTCGTTGCTGGAGCCCGCCTGACGGAGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413871.1
CDS TCA 90 bp AGGCGGCTGCACTTGCTCTGCACAGGTATGTTTCCCAGGGAAATATaGGACTGGGACAGGAAGACATTCTGTCCAGGCACCACCAGCCTA +
Preference number: 5 (lower is better)
Translates to: RRLHLLCTGMFPREI*DWDRKTFCPGTTSL
Trigger: TAGGCTGGTGGTGCCTGGACAGAATGTCTTCCTGTCCCAGTCTCATATTTCCCTGGGAAACATACCTGTGCAGAGCAAGTGCAGCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp GGTAATAGAGGGTGCAGTTGCCGTCATTCAGGAGGACAAGGAACCTaGACTGCTTGCTGTTCACCAGCACATTCCCAAAGGCCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: GNRGCSCRHSGGQGT*TACCSPAHSQRPAP
Trigger: AGGAGCTGGCCTTTGGGAATGTGCTGGTGAACAGCAAGCAGTCCAGGTTCCTTGTCCTCCTGAATGACGGCAACTGCACCCTCTATTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp GTCTGTCTTCCTTCGGCTGCTTGCCCTTCCCATCCTCCCAGCTGCTaGAGGGTACAGGCAGGATTGGCATTAAGTACAGGCTGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: VCLPSAACPSHPPSC*RVQAGLALSTGCFS
Trigger: AGAAAAACAGCCTGTACTTAATGCCAATCCTGCCTGTACCCTCCAGCAGCTGGGAGGATGGGAAGGGCAAGCAGCCGAAGGAAGACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp CCAGCTGAAGTTGACACAGTAGTGCTGCAGGGACACAGCAGGGCCTaGACACAGGAGATGGGGTATCAGCTTCCCCAAGGATATCTTAGA +
Preference number: 5 (lower is better)
Translates to: PAEVDTVVLQGHSRA*TQEMGYQLPQGYLR
Trigger: TCTAAGATATCCTTGGGGAAGCTGATACCCCATCTCCTGTGTCCAGGCCCTGCTGTGTCCCTGCAGCACTACTGTGTCAACTTCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS-3UTR CAA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGCTGCACTGCTGTCGTaGATGGCAGGGATGGCCACT +
Preference number: 5 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSAALLS*MAGMAT
Trigger: AGTGGCCATCCCTGCCATCAACGACAGCAGTGCAGC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCGGCCGTGCAGTCCGATaGGTTCTCAATCCACAGGGG +
Preference number: 5 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSGRAVR*VLNPQG
Trigger: CCCCTGTGGATTGAGAACCAATCGGACTGCACGGCC...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTTCAGGATGGCTGGCTaGGTGCTGTCCGAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSFRMAG*VLSEWQ
Trigger: CTGCCACTCGGACAGCACCAAGCCAGCCATCCTGAA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCACCATGATCTTGCCCTaGGTGTGGTTCATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLTMILP*VWFIRH
Trigger: GTGCCTGATGAACCACACCAAGGGCAAGATCATGGT...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp CACAATTATCTGGTGCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCCAGACCACCATGATCTaGCCCTTGGTGTGGTTCATC +
Preference number: 5 (lower is better)
Translates to: HNYLVLLTLSLGPASCPLQTTMI*PLVWFI
Trigger: GATGAACCACACCAAGGGCAAGATCATGGTGGTCTG...GAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAGATAATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp GCTGCTGACTTTGTCTCTAGGCCCAGCTTCCTGCCCGCTCAAAGCTCCTTTAGACAGACCACCATGATCTaGCCCTTGGTGTGGTTCATC +
Preference number: 5 (lower is better)
Translates to: AADFVSRPSFLPAQSSFRQTTMI*PLVWFI
Trigger: GATGAACCACACCAAGGGCAAGATCATGGTGGTCTG...TCTAAAGGAGCTTTGAGCGGGCAGGAAGCTGGGCCTAGAGACAAAGTCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGCTGGTGCTGCTGACTTaGTCTCTAGGCCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: REYLPVHPVFPNSLISAELVLLT*SLGPAS
Trigger: GGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAG...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS TCA 90 bp AGCAGGATCTCCCGGCCATGGGACACCTTGAAGAGCACTGGGAGGTaGTCAGTACCGATGAACAGGTGGCTGTATTTTAACTCCACCATC +
Preference number: 5 (lower is better)
Translates to: SRISRPWDTLKSTGR*SVPMNRWLYFNSTI
Trigger: GATGGTGGAGTTAAAATACAGCCACCTGTTCATCGGTACTGATCACCTCCCAGTGCTCTTCAAGGTGTCCCATGGCCGGGAGATCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS-3UTR CAA 90 bp TCACCCCACTGCCAGAGCATTAGGACGGGGGCAACCAAAGCCTCCACTTTGGAATCAGAACCAGATTCCTaGTGGTCTCCTTTCCTAGCT +
Preference number: 5 (lower is better)
Translates to: SPHCQSIRTGATKASTLESEPDS*WSPFLA
Trigger: AGCTAGGAAAGGAGACCACAAGGAATCTGGTTCTGA...TTCCAAAGTGGAGGCTTTGGTTGCCCCCGTCCTAATGCTCTGGCAGTGGGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CAA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTGGTCCTCCGGGCACTaGTGCTTTATGCTCACCAGC +
Preference number: 5 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSWSSGH*CFMLTS
Trigger: GCTGGTGAGCATAAAGCACAAGTGCCCGGAGGACCA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTTTACCGCCGACGGGTaGTGTAGCCTGATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSFTADG*CSLICL
Trigger: GAGGCAGATCAGGCTACACAACCCGTCGGCGGTAAA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCCTGGTGTCCAGAGTCTaGGGGTGGAAGAACACCGAC +
Preference number: 5 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSLVSRV*GWKNTD
Trigger: GTCGGTGTTCTTCCACCCCAAGACTCTGGACACCAG...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp AGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATCACCCCACTGCCAGCTGGTGTCCAGAGTCTaGGGGTGGAAGAACACCGAC +
Preference number: 5 (lower is better)
Translates to: SQASTTLFLQTSTSPHCQLVSRV*GWKNTD
Trigger: GTCGGTGTTCTTCCACCCCAAGACTCTGGACACCAG...CTGGCAGTGGGGTGATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS TCA 90 bp TTGGCTGCCAGGAGAAGGCAATTTCCTCGTTCTTGGAGATGTTGTTaGGGAAGAGCAGGCGGCTGCACTTGCTCTGCACAGGTATGTTTC +
Preference number: 5 (lower is better)
Translates to: LAARRRQFPRSWRCC*GRAGGCTCSAQVCF
Trigger: GAAACATACCTGTGCAGAGCAAGTGCAGCCGCCTGCTCTTCCTCAACAACATCTCCAAGAACGAGGAAATTGCCTTCTCCTGGCAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS-3UTR CAA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCACTTTAAGCAGGGTCTaGGAGGCACAGCCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSTLSRV*EAQPEG
Trigger: GCCTTCTGGCTGTGCCTCCAAGACCCTGCTTAAAGT...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp AAGCCTCCTCAAAAGATCGGACGTGGTCCCAAGTTTAGAGATGAAAAGATCAGGTTCAGGATGGCTGGCTaGGTGCTGTCCGAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: KPPQKIGRGPKFRDEKIRFRMAG*VLSEWQ
Trigger: CTGCCACTCGGACAGCACCAAGCCAGCCATCCTGAA...CCTGATCTTTTCATCTCTAAACTTGGGACCACGTCCGATCTTTTGAGGAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS-3UTR CAA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGACCATGATCTTGCCCTaGGTGTGGTTCATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: REYLPVHPVFPNSLISAETMILP*VWFIRH
Trigger: GTGCCTGATGAACCACACCAAGGGCAAGATCATGGT...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS TCA 90 bp GAAGAGAGCCTGCTTTCGGGGCTCAAGGCTGTGGCACTGGGTCCTTaGTCCCTTATACTGGTACCTGTACTTCATCTTCTGGAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: EESLLSGLKAVALGP*SLILVPVLHLLEFQ
Trigger: TTGAAACTCCAGAAGATGAAGTACAGGTACCAGTATAAGGGATCAAGGACCCAGTGCCACAGCCTTGAGCCCCGAAAGCAGGCTCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS GCA 90 bp AACTTAGTTGACTGCTCATTCCAGAATTGGCGGAAGTACGGCACCTaGTCCACCAGGCTTTGGTCCACAGCCTCATGGAAGTTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: NLVDCSFQNWRKYGT*STRLWSTASWKFLS
Trigger: AGACAAGAACTTCCATGAGGCTGTGGACCAAAGCCTGGTGGAGCAGGTGCCGTACTTCCGCCAATTCTGGAATGAGCAGTCAACTAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS-3UTR CAA 90 bp CTGAACCTCAGCAGAGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATCTGGTGCTGCTGACTTaGTCTCTAGGCCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LNLSRARHLQPYSYKPQHLVLLT*SLGPAS
Trigger: GGAAGCTGGGCCTAGAGACAAAGTCAGCAGCACCAG...ATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCTCTGCTGAGGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS GCA 90 bp GGCATTAAGTACAGGCTGTTTTTCTGGTCCATGAACTTAGTTGACTaGTCATTCCAGAATTGGCGGAAGTACGGCACCTGCTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: GIKYRLFFWSMNLVD*SFQNWRKYGTCSTR
Trigger: CCTGGTGGAGCAGGTGCCGTACTTCCGCCAATTCTGGAATGAGCAGTCAACTAAGTTCATGGACCAGAAAAACAGCCTGTACTTAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp TTTGTTTTGAAGAGAGCCTGCTTTCGGGGCTCAAGGCTGTGGCACTaGGTCCTTGATCCCTTATACTGGTACCTGTACTTCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: FVLKRACFRGSRLWH*VLDPLYWYLYFIFW
Trigger: CCAGAAGATGAAGTACAGGTACCAGTATAAGGGATCAAGGACCCAGTGCCACAGCCTTGAGCCCCGAAAGCAGGCTCTCTTCAAAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CAA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTCAGAACCAGATTCCTaGTGGTCTCCTTTCCTAGCT +
Preference number: 5 (lower is better)
Translates to: REYLPVHPVFPNSLISAESEPDS*WSPFLA
Trigger: AGCTAGGAAAGGAGACCACAAGGAATCTGGTTCTGA...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp AGGGAGTATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGGTTTTCCCAAACAGCTaGATCTCAGCTGAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: REYLPVHPVFPNSLISAEVFPNS*ISAEFS
Trigger: GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAAC...CTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS TCA 90 bp CATGGCCACACTTGGCACTGCTCAGCAAGCTCCAGTGGGTGTTACTaGAGTGTGTGCATTACCTTTATCTGGCTTTTACTCTCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: HGHTWHCSASSSGCY*SVCITFIWLLLSAC
Trigger: ACAAGCAGAGAGTAAAAGCCAGATAAAGGTAATGCACACACTTCAGTAACACCCACTGGAGCTTGCTGAGCAGTGCCAAGTGTGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS GCA 90 bp ATGGGGATGAACTGGTGGGTAGTAGAGGTGAAGTGCACATACTTCTaGTCCGGCTTCACTGTCACACCTATGAAATTTAGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: MGMNWWVVEVKCTYF*SGFTVTPMKFSRIS
Trigger: GGAGATCCTGCTAAATTTCATAGGTGTGACAGTGAAGCCGGAGCAGAAGTATGTGCACTTCACCTCTACTACCCACCAGTTCATCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS-3UTR CAA 90 bp AGAGGAAAATATCTTAATGACCTAGGGGTAGAGAAGGACTTCTTAGGAGAAGCAGCTGCACTGCTGTCGTaGATGGCAGGGATGGCCACT +
Preference number: 5 (lower is better)
Translates to: RGKYLNDLGVEKDFLGEAAALLS*MAGMAT
Trigger: AGTGGCCATCCCTGCCATCAACGACAGCAGTGCAGC...TGCTTCTCCTAAGAAGTCCTTCTCTACCCCTAGGTCATTAAGATATTTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CAA 90 bp TATCTCCCTGTGCACCCAGTTTTCCCAAACAGCTTGATCTCAGCTGAGTTCTCCTCAGAACCAGATTCCTaGTGGTCTCCTTTCCTAGCT +
Preference number: 5 (lower is better)
Translates to: YLPVHPVFPNSLISAEFSSEPDS*WSPFLA
Trigger: AGCTAGGAAAGGAGACCACAAGGAATCTGGTTCTGA...GGAGAACTCAGCTGAGATCAAGCTGTTTGGGAAAACTGGGTGCACAGGGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
CDS-3UTR CAA 90 bp AGCCAGGCATCTACAACCTTATTCCTACAAACCTCAACATCACCCCACTGCCAGACCAAAGCCTCCACTTaGGAAAGCCTCCTCAAAAGA +
Preference number: 5 (lower is better)
Translates to: SQASTTLFLQTSTSPHCQTKAST*ESLLKR
Trigger: TCTTTTGAGGAGGCTTTCCAAAGTGGAGGCTTTGGT...CTGGCAGTGGGGTGATGTTGAGGTTTGTAGGAATAAGGTTGTAGATGCCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441968.5
CDS CCA 90 bp CTGGAGGGTACAGGCAGGATTGGCATTAAGTACAGGCTGTTTTTCTaGTCCATGAACTTAGTTGACTGCTCATTCCAGAATTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: LEGTGRIGIKYRLFF*SMNLVDCSFQNWRK
Trigger: CTTCCGCCAATTCTGGAATGAGCAGTCAACTAAGTTCATGGACCAGAAAAACAGCCTGTACTTAATGCCAATCCTGCCTGTACCCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 90 bp AGGGGGAAAGAAGAGGCAAATGAGACTGATGGATTCTCCACCTTCTaGGTTTTCTCCACCAGTCTACAACCGGTTAAGGTAAACATCACT +
Preference number: 5 (lower is better)
Translates to: RGKEEANETDGFSTF*VFSTSLQPVKVNIT
Trigger: AGTGATGTTTACCTTAACCGGTTGTAGACTGGTGGAGAAAACCCAGAAGGTGGAGAATCCATCAGTCTCATTTGCCTCTTCTTTCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341552.10
ENST00000453220.5
ENST00000463683.1
CDS-3UTR CAA 90 bp AGAGGAAAATATCTTAATGACCTAGGGGTAGAGAAGGACTTCTTAGGAGAAGCACCCCAGATGACCCTCTaGTTCACTCTCTCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RGKYLNDLGVEKDFLGEAPQMTL*FTLSCF
Trigger: GAAGCAGGAGAGAGTGAACAAGAGGGTCATCTGGGG...TGCTTCTCCTAAGAAGTCCTTCTCTACCCCTAGGTCATTAAGATATTTTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CAA 90 bp ACTTTGGGAAATAGTTTGGTTTATCTACAGCAAGTGAACAGGTACATGGCCCAATGTGGCACTGGGTCCTaGATCCCTTATACTGGTACC +
Preference number: 5 (lower is better)
Translates to: TLGNSLVYLQQVNRYMAQCGTGS*IPYTGT
Trigger: GGTACCAGTATAAGGGATCAAGGACCCAGTGCCACA...TTGGGCCATGTACCTGTTCACTTGCTGTAGATAAACCAAACTATTTCCCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS TCA 90 bp GAGCACTCTGAGTATGGAGCTCCAATTGTGAACTGGACGTTCAGATaGAATCAAAGAAATGTAAGATCGCCTCCATATTGCCGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: EHSEYGAPIVNWTFR*NQRNVRSPPYCRLH
Trigger: ATGGAGACGGCAATATGGAGGCGATCTTACATTTCTTTGATTTCATCTGAACGTCCAGTTCACAATTGGAGCTCCATACTCAGAGTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295729.6
ENST00000410037.5
CDS-3UTR CAA 90 bp AACTGGACACATATACACGAATGCCAACAGTCCCAAATAGAAACAGCCCAAACTTGGTACAGGCACACATaGGGACACTATACCACAATG +
Preference number: 5 (lower is better)
Translates to: NWTHIHECQQSQIETAQTWYRHT*GHYTTM
Trigger: CATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCA...AGTTTGGGCTGTTTCTATTTGGGACTGTTGGCATTCGTGTATATGTGTCCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CAA 90 bp ACTTTGGGAAATAGTTTGGTTTATCTACAGCAAGTGAACAGGTACATGGCCCAATCAGAACCAGATTCCTaGTGGTCTCCTTTCCTAGCT +
Preference number: 5 (lower is better)
Translates to: TLGNSLVYLQQVNRYMAQSEPDS*WSPFLA
Trigger: AGCTAGGAAAGGAGACCACAAGGAATCTGGTTCTGA...TTGGGCCATGTACCTGTTCACTTGCTGTAGATAAACCAAACTATTTCCCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS TCA 90 bp CCGGTTAAGGTAAACATCACTCCAATTGTGAACTGGACGTTCAGATaGAATCAAAGAAATGTAAGATCGCCTCCATATTGCCGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: PVKVNITPIVNWTFR*NQRNVRSPPYCRLH
Trigger: ATGGAGACGGCAATATGGAGGCGATCTTACATTTCTTTGATTTCATCTGAACGTCCAGTTCACAATTGGAGTGATGTTTACCTTAACCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341552.10
CDS CCA 90 bp GAGGGATCCTCGATGACTGTAGCTGAAATCATATGCAAATATATGTaGCACATATATTTGTATATATGCCAGATGCTATGTATATGCCAG +
Preference number: 5 (lower is better)
Translates to: EGSSMTVAEIICKYM*HIYLYICQMLCICQ
Trigger: CTGGCATATACATAGCATCTGGCATATATACAAATATATGTGCCACATATATTTGCATATGATTTCAGCTACAGTCATCGAGGATCCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS-3UTR CAA 90 bp GATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAATCCCCAGAAAAACTCTaGTACTTATGTAACTGGACA +
Preference number: 5 (lower is better)
Translates to: DEYIMVQAHIGTLYHNEKSPEKL*YLCNWT
Trigger: TGTCCAGTTACATAAGTACAAGAGTTTTTCTGGGGA...TTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS-3UTR CAA 90 bp ATGAATACATTATGGTACAGGCACACATTGGGACACTATACCACAATGAAAAATACTTTGGGAAATAGTTaGGTTTATCTACAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: MNTLWYRHTLGHYTTMKNTLGNS*VYLQQV
Trigger: CACTTGCTGTAGATAAACCAAACTATTTCCCAAAGT...ATTTTTCATTGTGGTATAGTGTCCCAATGTGTGCCTGTACCATAATGTATTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS CCA 72 bp CCTGGGCACGCAGAACGGCGGCAGGGCGATGACGCGTaGCCGCGAGGTGAGTACCACCTCCCCGCGGCTCGC +
Preference number: 6 (lower is better)
Translates to: PGHAERRQGDDA*PRGEYHLPAAR
Trigger: GCGAGCCGCGGGGAGGTGGTACTCACCTCGCGGCCACGCGTCATCGCCCTGCCGCCGTTCTGCGTGCCCAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GCCCAACGCCCACCAGCCGGAGCATGTAGTGGGTGGTaGCAGCGGGGTTGGCATTTGGGGACAGGCCGGCTT +
Preference number: 6 (lower is better)
Translates to: AQRPPAGACSGW*QRGWHLGTGRL
Trigger: AAGCCGGCCTGTCCCCAAATGCCAACCCCGCTGCCACCACCCACTACATGCTCCGGCTGGTGGGCGTTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 90 bp CGGAAGGTCGGTAGGAAGTGGCACCACCGGGTGGAGTACCTCTGCTaGCTGCGTCGGCAGCAGCGTGTCCGGGGTCAGACTCCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: RKVGRKWHHRVEYLC*LRRQQRVRGQTPGH
Trigger: GTGCCCAGGAGTCTGACCCCGGACACGCTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTACCGACCTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp CCCCGGGCCAGGTGTGTGCGGTACCAGGTGAGGTGCTaGGGCTTCAGGATGGCTGGCTTGGTGCTGTCCGAG +
Preference number: 6 (lower is better)
Translates to: PRARCVRYQVRC*GFRMAGLVLSE
Trigger: CTCGGACAGCACCAAGCCAGCCATCCTGAAGCCTCAGCACCTCACCTGGTACCGCACACACCTGGCCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS GCA 72 bp CAGTCAGGCAGATGGTGTCCTGGGACCGGGGTGGCATaGTCCCCTCTGTTCGGTCCAGCTGCAGAGCGAGGG +
Preference number: 6 (lower is better)
Translates to: QSGRWCPGTGVA*SPLFGPAAERG
Trigger: CCCTCGCTCTGCAGCTGGACCGAACAGAGGGGAGCATGCCACCCCGGTCCCAGGACACCATCTGCCTGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp TGGGGGCAGGGCCAGGACACCTCCTCCTTTGGGGTCTaGAGTTTCCAGCTGGCAGGCCGGCTGACAGACTGC +
Preference number: 6 (lower is better)
Translates to: WGQGQDTSSFGV*SFQLAGRLTDC
Trigger: GCAGTCTGTCAGCCGGCCTGCCAGCTGGAAACTGCAGACCCCAAAGGAGGAGGTGTCCTGGCCCTGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp GGAAGTGGCACCACCGGGTGGAGTACCTCTGCTTGCTaGGTCGGCAGCAGCGTGTCCGGGGTCAGACTCCTG +
Preference number: 6 (lower is better)
Translates to: GSGTTGWSTSAC*VGSSVSGVRLL
Trigger: CAGGAGTCTGACCCCGGACACGCTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp GTCGGTAGGAAGTGGCACCACCGGGTGGAGTACCTCTaGTTGCTGCGTCGGCAGCAGCGTGTCCGGGGTCAG +
Preference number: 6 (lower is better)
Translates to: VGRKWHHRVEYL*LLRRQQRVRGQ
Trigger: CTGACCCCGGACACGCTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTACCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp CCAGCCGGAGCATGTAGTGGGTGGTGGCAGCGGGGTTaGCATTTGGGGACAGGCCGGCTTCCCAGACCCACA +
Preference number: 6 (lower is better)
Translates to: PAGACSGWWQRG*HLGTGRLPRPT
Trigger: TGTGGGTCTGGGAAGCCGGCCTGTCCCCAAATGCCAACCCCGCTGCCACCACCCACTACATGCTCCGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp CGCTGCTTGGGACAGGCAGTCAGGCAGATGGTGTCCTaGGACCGGGGTGGCATGCTCCCCTCTGTTCGGTCC +
Preference number: 6 (lower is better)
Translates to: RCLGQAVRQMVS*DRGGMLPSVRS
Trigger: GGACCGAACAGAGGGGAGCATGCCACCCCGGTCCCAGGACACCATCTGCCTGACTGCCTGTCCCAAGCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp ACTGGGACCGCTGCTTGGGACAGGCAGTCAGGCAGATaGTGTCCTGGGACCGGGGTGGCATGCTCCCCTCTG +
Preference number: 6 (lower is better)
Translates to: TGTAAWDRQSGR*CPGTGVACSPL
Trigger: CAGAGGGGAGCATGCCACCCCGGTCCCAGGACACCATCTGCCTGACTGCCTGTCCCAAGCAGCGGTCCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp GTCCCGCCTCCAGAGGCCGGAAGACGATGGGGAGCGTaGGGGTTATGCCTGGGCTCAGGAAGATGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: VPPPEAGRRWGA*GLCLGSGRWAE
Trigger: CTCAGCCCATCTTCCTGAGCCCAGGCATAACCCTCACGCTCCCCATCGTCTTCCGGCCTCTGGAGGCGGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441968.5
ENST00000462848.5
CDS GCA 72 bp AGCCCCCTGGAGGGCTGGACAGCCAGCAGCTTTCGATaGTGCTCAGAGACCCTCCACTCGAACTGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: SPLEGWTASSFR*CSETLHSNCRG
Trigger: GCCCCTGCAGTTCGAGTGGAGGGTCTCTGAGCAGCATCGAAAGCTGCTGGCTGTCCAGCCCTCCAGGGGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp GCAGAGCGAGGGGGTGGTTGTCAACGGCCTCAGGGCTaGCCTGCTCCAGGTAGAGGCGGTAATAGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: AERGGGCQRPQG*PAPGRGGNRGC
Trigger: GCACCCTCTATTACCGCCTCTACCTGGAGCAGGGCAGCCCTGAGGCCGTTGACAACCACCCCCTCGCTCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp GTAGGAAGTGGCACCACCGGGTGGAGTACCTCTGCTTaGTGCGTCGGCAGCAGCGTGTCCGGGGTCAGACTC +
Preference number: 6 (lower is better)
Translates to: VGSGTTGWSTSA*CVGSSVSGVRL
Trigger: GAGTCTGACCCCGGACACGCTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GAGCATGTAGTGGGTGGTGGCAGCGGGGTTGGCATTTaGGGACAGGCCGGCTTCCCAGACCCACATCCCCAC +
Preference number: 6 (lower is better)
Translates to: EHVVGGGSGVGI*GQAGFPDPHPH
Trigger: GTGGGGATGTGGGTCTGGGAAGCCGGCCTGTCCCCAAATGCCAACCCCGCTGCCACCACCCACTACATGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp ACAGGCAGTCAGGCAGATGGTGTCCTGGGACCGGGGTaGCATGCTCCCCTCTGTTCGGTCCAGCTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: TGSQADGVLGPG*HAPLCSVQLQS
Trigger: GCTCTGCAGCTGGACCGAACAGAGGGGAGCATGCCACCCCGGTCCCAGGACACCATCTGCCTGACTGCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 72 bp GGTAGGAAGTGGCACCACCGGGTGGAGTACCTCTGCTaGCTGCGTCGGCAGCAGCGTGTCCGGGGTCAGACT +
Preference number: 6 (lower is better)
Translates to: GRKWHHRVEYLC*LRRQQRVRGQT
Trigger: AGTCTGACCCCGGACACGCTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp CCTTCGCCTCCAGAGGCCGGAAGACGATGGGGAGCGTaGGGGTTATGCCTGGGCTCAGGAAGATGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: PSPPEAGRRWGA*GLCLGSGRWAE
Trigger: CTCAGCCCATCTTCCTGAGCCCAGGCATAACCCTCACGCTCCCCATCGTCTTCCGGCCTCTGGAGGCGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000453220.5
CDS GCA 72 bp GGGCTGGGCGCTGATGGTGCTGCAGGCACTCATGGCTaGACTGCTGTCGTTGATGGCAGGGATGGCCACTGT +
Preference number: 6 (lower is better)
Translates to: GLGADGAAGTHG*TAVVDGRDGHC
Trigger: ACAGTGGCCATCCCTGCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGCAGCACCATCAGCGCCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295729.6
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000436631.5
ENST00000441968.5
ENST00000453220.5
ENST00000457968.5
ENST00000458526.1
ENST00000462848.5
ENST00000463683.1
CDS GCA 72 bp TGGAAGCCCTCGGCATCCTGGTCCTCCGGGCACTTGTaGTTTATGCTCACCAGCAGCTGGGCGCACTTGGCC +
Preference number: 6 (lower is better)
Translates to: WKPSASWSSGHL*FMLTSSWAHLA
Trigger: GGCCAAGTGCGCCCAGCTGCTGGTGAGCATAAAGCACAAGTGCCCGGAGGACCAGGATGCCGAGGGCTTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
CDS GCA 72 bp GTAGGTGCAGATGAGGATGATCTGGTGGGCCCCGGGTaGCACAAGGCCCGAAGTGGGCCGAAGGATGACGTC +
Preference number: 6 (lower is better)
Translates to: VGADEDDLVGPG*HKARSGPKDDV
Trigger: GACGTCATCCTTCGGCCCACTTCGGGCCTTGTGGCACCCGGGGCCCACCAGATCATCCTCATCTGCACCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp CCCCTGGAGGGCTGGACAGCCAGCAGCTTTCGATGCTaGTCAGAGACCCTCCACTCGAACTGCAGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: PLEGWTASSFRC*SETLHSNCRGR
Trigger: TCTGCCCCTGCAGTTCGAGTGGAGGGTCTCTGAGCAGCATCGAAAGCTGCTGGCTGTCCAGCCCTCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GGCCATGGACTTGAGTGGGGGCACGTCGCAGCTCTCTaGAGTCACCCAGAAGGGGCAGTCAGACCTTCGCGT +
Preference number: 6 (lower is better)
Translates to: GHGLEWGHVAAL*SHPEGAVRPSR
Trigger: ACGCGAAGGTCTGACTGCCCCTTCTGGGTGACTCCAGAGAGCTGCGACGTGCCCCCACTCAAGTCCATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 72 bp CGGCTGGAAGTGCAGGCGCATGGCCATGGACTTGAGTaGGGGCACGTCGCAGCTCTCTGGAGTCACCCAGAA +
Preference number: 6 (lower is better)
Translates to: RLEVQAHGHGLE*GHVAALWSHPE
Trigger: TTCTGGGTGACTCCAGAGAGCTGCGACGTGCCCCCACTCAAGTCCATGGCCATGCGCCTGCACTTCCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 72 bp TGGCGAAGGCTTCGAGCTCCACCGTGTAAAGGCAGTTaGGGTGAGGCGGCTGGAAGTGCAGGCGCATGGCCA +
Preference number: 6 (lower is better)
Translates to: WRRLRAPPCKGS*GEAAGSAGAWP
Trigger: TGGCCATGCGCCTGCACTTCCAGCCGCCTCACCCCAACTGCCTTTACACGGTGGAGCTCGAAGCCTTCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 72 bp CCCGAAGTGGGCCGAAGGATGACGTCTGAGCCTCTCTaGGGGGCCAGGCTGAAGGTCAGCAGCTTGCAGTCT +
Preference number: 6 (lower is better)
Translates to: PEVGRRMTSEPL*GARLKVSSLQS
Trigger: AGACTGCAAGCTGCTGACCTTCAGCCTGGCCCCCCAGAGAGGCTCAGACGTCATCCTTCGGCCCACTTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp TTCAGCTGCTGTTGCCACTGCCATTGCATGGACTCCTaGGACTCAGGCTGTGGTGTGGGCCCGATGCCCGCC +
Preference number: 6 (lower is better)
Translates to: FSCCCHCHCMDS*DSGCGVGPMPA
Trigger: GGCGGGCATCGGGCCCACACCACAGCCTGAGTCCCAGGAGTCCATGCAATGGCAGTGGCAACAGCAGCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp ACCACCTCCCCGCGGCTCGCCTCCACCAGGATGTTCTaGATCATGTTCTCCAGCAGCGCCTCCTGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: TTSPRLASTRMF*IMFSSSASCRL
Trigger: CAACCTGCAGGAGGCGCTGCTGGAGAACATGATCCAGAACATCCTGGTGGAGGCGAGCCGCGGGGAGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GCTGGGCGCGGGCATTTACGGAAGGTCGGTAGGAAGTaGCACCACCGGGTGGAGTACCTCTGCTTGCTGCGT +
Preference number: 6 (lower is better)
Translates to: AGRGHLRKVGRK*HHRVEYLCLLR
Trigger: ACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTACCGACCTTCCGTAAATGCCCGCGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 72 bp GTGGGCTGGAAGGCACAGTGCAGGGTCATACGGGCCTaGCCCACCAGCGTCCCAAAGGCAGGCCTGATGGTA +
Preference number: 6 (lower is better)
Translates to: VGWKAQCRVIRA*PTSVPKAGLMV
Trigger: TACCATCAGGCCTGCCTTTGGGACGCTGGTGGGCAAGGCCCGTATGACCCTGCACTGTGCCTTCCAGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CAA 90 bp TGGGCGCTGATGGTGCTGCAGGCACTCATGGCTGCACTGCTGTCGTaGATGGCAGGGATGGCCACTGTGCTGGCACTCAGGCAGGATCCA +
Preference number: 6 (lower is better)
Translates to: WALMVLQALMAALLS*MAGMATVLALRQDP
Trigger: TGGATCCTGCCTGAGTGCCAGCACAGTGGCCATCCCTGCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGCAGCACCATCAGCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295729.6
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000436631.5
ENST00000441968.5
ENST00000453220.5
ENST00000457968.5
ENST00000458526.1
ENST00000462848.5
ENST00000463683.1
CDS TCA 72 bp GGGCACGTCCACCGTGTAGGTCTTGGCCTCGATAGGTaGGAAGATCCACAAGACCCGGGCAGTGCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: GHVHRVGLGLDR*EDPQDPGSAAW
Trigger: CCAGGCAGCACTGCCCGGGTCTTGTGGATCTTCTCACCTATCGAGGCCAAGACCTACACGGTGGACGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp GGGGCATTTACCGCCGACGGGTTGTGTAGCCTGATCTaGCTCTCCGAGGTGCAGCCCACAGCAACAGAGCCA +
Preference number: 6 (lower is better)
Translates to: GAFTADGLCSLI*LSEVQPTATEP
Trigger: TGGCTCTGTTGCTGTGGGCTGCACCTCGGAGAGGCAGATCAGGCTACACAACCCGTCGGCGGTAAATGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
CDS GCA 72 bp GCCGTGCAGTCCGATTGGTTCTCAATCCACAGGGGCTaGTCGGAGCGCTCCCCAAGGTTGACCCAGCTGAAG +
Preference number: 6 (lower is better)
Translates to: AVQSDWFSIHRG*SERSPRLTQLK
Trigger: CTTCAGCTGGGTCAACCTTGGGGAGCGCTCCGAGCAGCCCCTGTGGATTGAGAACCAATCGGACTGCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS GCA 72 bp TGGACTCCTGGGACTCAGGCTGTGGTGTGGGCCCGATaGCCGCCCAGCTCACTTTCTCTTCCTTCTCATCCC +
Preference number: 6 (lower is better)
Translates to: WTPGTQAVVWAR*PPSSLSLPSHP
Trigger: GGGATGAGAAGGAAGAGAAAGTGAGCTGGGCGGGCATCGGGCCCACACCACAGCCTGAGTCCCAGGAGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp CTGAAGGTCCACGTCAGCGTAAGTCTCTCGTTGGGCTaGATTAGCCCCCTGGAGGGCTGGACAGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LKVHVSVSLSLG*ISPLEGWTASS
Trigger: GCTGCTGGCTGTCCAGCCCTCCAGGGGGCTAATCCAGCCCAACGAGAGACTTACGCTGACGTGGACCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp CTCTGCCCAGAGCTCCACGTCAATCCGCTGGTCACTTaGAAGGAGGAAGGCCCAGTCCAGGGACACCACTCC +
Preference number: 6 (lower is better)
Translates to: LCPELHVNPLVT*KEEGPVQGHHS
Trigger: GGAGTGGTGTCCCTGGACTGGGCCTTCCTCCTTCCAAGTGACCAGCGGATTGACGTGGAGCTCTGGGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GCCATTGCATGGACTCCTGGGACTCAGGCTGTGGTGTaGGCCCGATGCCCGCCCAGCTCACTTTCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: AIAWTPGTQAVV*ARCPPSSLSLP
Trigger: AGGAAGAGAAAGTGAGCTGGGCGGGCATCGGGCCCACACCACAGCCTGAGTCCCAGGAGTCCATGCAATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp AGGATGTTCTGGATCATGTTCTCCAGCAGCGCCTCCTaGAGGTTGGCGAAGGCCGGGAGCCTTCTGATGGCC +
Preference number: 6 (lower is better)
Translates to: RMFWIMFSSSAS*RLAKAGSLLMA
Trigger: GGCCATCAGAAGGCTCCCGGCCTTCGCCAACCTGCAGGAGGCGCTGCTGGAGAACATGATCCAGAACATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GACACACATTTCTTCTCTCCCGGAAGCACGATGCCATaGGCCGTGGGGCATGAGAAGGCCTGGTCTTCGGCC +
Preference number: 6 (lower is better)
Translates to: DTHFFSPGSTMP*AVGHEKAWSSA
Trigger: GGCCGAAGACCAGGCCTTCTCATGCCCCACGGCCCATGGCATCGTGCTTCCGGGAGAGAAGAAATGTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
CDS CCA 72 bp TCGATGGCAAACTGGAAGTGGGCCGTGCAGTCCGATTaGTTCTCAATCCACAGGGGCTGCTCGGAGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SMANWKWAVQSD*FSIHRGCSERS
Trigger: GGAGCGCTCCGAGCAGCCCCTGTGGATTGAGAACCAATCGGACTGCACGGCCCACTTCCAGTTTGCCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 72 bp AGTCTCTCGTTGGGCTGGATTAGCCCCCTGGAGGGCTaGACAGCCAGCAGCTTTCGATGCTGCTCAGAGACC +
Preference number: 6 (lower is better)
Translates to: SLSLGWISPLEG*TASSFRCCSET
Trigger: GGTCTCTGAGCAGCATCGAAAGCTGCTGGCTGTCCAGCCCTCCAGGGGGCTAATCCAGCCCAACGAGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GGGGACAGGCCGGCTTCCCAGACCCACATCCCCACTTaGAACAGGTACTTGGTCTCCTCCAAAGGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: GDRPASQTHIPT*NRYLVSSKGLK
Trigger: CTTCAGCCCTTTGGAGGAGACCAAGTACCTGTTCCAAGTGGGGATGTGGGTCTGGGAAGCCGGCCTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp TCTGCTTGCTCTGCCCAGAGCTCCACGTCAATCCGCTaGTCACTTGGAAGGAGGAAGGCCCAGTCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: SACSAQSSTSIR*SLGRRKAQSRD
Trigger: GTCCCTGGACTGGGCCTTCCTCCTTCCAAGTGACCAGCGGATTGACGTGGAGCTCTGGGCAGAGCAAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp ATTTACGGAAGGTCGGTAGGAAGTGGCACCACCGGGTaGAGTACCTCTGCTTGCTGCGTCGGCAGCAGCGTG +
Preference number: 6 (lower is better)
Translates to: IYGRSVGSGTTG*STSACCVGSSV
Trigger: CACGCTGCTGCCGACGCAGCAAGCAGAGGTACTCCACCCGGTGGTGCCACTTCCTACCGACCTTCCGTAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp ACTGTCCAGCCAAGAGAAAGCCTGGCACGCAGAGGATaGAGCCTGAAGCTGCCCTCGGTCACTTCCTGCCAC +
Preference number: 6 (lower is better)
Translates to: TVQPRESLARRG*SLKLPSVTSCH
Trigger: GTGGCAGGAAGTGACCGAGGGCAGCTTCAGGCTCCATCCTCTGCGTGCCAGGCTTTCTCTTGGCTGGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 72 bp AGGAATGAGGCTGTACACGAGATCCAGGGCTTTGCCTaGGAGCCCAGGGACTCACCCTCAGGGAAGGCACTC +
Preference number: 6 (lower is better)
Translates to: RNEAVHEIQGFA*EPRDSPSGKAL
Trigger: GAGTGCCTTCCCTGAGGGTGAGTCCCTGGGCTCCCAGGCAAAGCCCTGGATCTCGTGTACAGCCTCATTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS CAA 72 bp TTCTGGAAGCCCTCGGCATCCTGGTCCTCCGGGCACTaGTGCTTTATGCTCACCAGCAGCTGGGCGCACTTG +
Preference number: 6 (lower is better)
Translates to: FWKPSASWSSGH*CFMLTSSWAHL
Trigger: CAAGTGCGCCCAGCTGCTGGTGAGCATAAAGCACAAGTGCCCGGAGGACCAGGATGCCGAGGGCTTCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
CDS CAA 72 bp GTCGATGGCAAACTGGAAGTGGGCCGTGCAGTCCGATaGGTTCTCAATCCACAGGGGCTGCTCGGAGCGCTC +
Preference number: 6 (lower is better)
Translates to: VDGKLEVGRAVR*VLNPQGLLGAL
Trigger: GAGCGCTCCGAGCAGCCCCTGTGGATTGAGAACCAATCGGACTGCACGGCCCACTTCCAGTTTGCCATCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CAA 72 bp TTCTGGATCATGTTCTCCAGCAGCGCCTCCTGCAGGTaGGCGAAGGCCGGGAGCCTTCTGATGGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: FWIMFSSSASCR*AKAGSLLMASF
Trigger: GAAGGAGGCCATCAGAAGGCTCCCGGCCTTCGCCAACCTGCAGGAGGCGCTGCTGGAGAACATGATCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 90 bp CTCCAAGCAGTCGATGGCAAACTGGAAGTGGGCCGTGCAGTCCGATaGGTTCTCAATCCACAGGGGCTGCTCGGAGCGCTCCCCAAGGTT +
Preference number: 6 (lower is better)
Translates to: LQAVDGKLEVGRAVR*VLNPQGLLGALPKV
Trigger: AACCTTGGGGAGCGCTCCGAGCAGCCCCTGTGGATTGAGAACCAATCGGACTGCACGGCCCACTTCCAGTTTGCCATCGACTGCTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CAA 90 bp ACCCAGAAGGGGCAGTCAGACCTTCGCGTCCAGACCACCATGATCTaGCCCTTGGTGTGGTTCATCAGGCACAGGGGTACAGGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: TQKGQSDLRVQTTMI*PLVWFIRHRGTGLG
Trigger: CCCCAACCCTGTACCCCTGTGCCTGATGAACCACACCAAGGGCAAGATCATGGTGGTCTGGACGCGAAGGTCTGACTGCCCCTTCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS TCA 72 bp ATGAGACAGGCCACACGCCGAAAGCAGATGATGGGGTaGGTGGGCTGGAAGGCACAGTGCAGGGTCATACGG +
Preference number: 6 (lower is better)
Translates to: MRQATRRKQMMG*VGWKAQCRVIR
Trigger: CCGTATGACCCTGCACTGTGCCTTCCAGCCCACTCACCCCATCATCTGCTTTCGGCGTGTGGCCTGTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS GCA 72 bp TCAGGCAGGATCCACCAGAGTTCACGGTGTGGTTCCTaGTGTTCCTGGACCTCACGACGGAGCTTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: SGRIHQSSRCGS*CSWTSRRSLEP
Trigger: AGGCTCCAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGAACTCTGGTGGATCCTGCCTGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295729.6
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000436631.5
ENST00000441968.5
ENST00000453220.5
ENST00000457968.5
ENST00000458526.1
ENST00000462848.5
ENST00000463683.1
CDS GCA 72 bp GGCTGCCCTGCTCCAGGTAGAGGCGGTAATAGAGGGTaGAGTTGCCGTCATTCAGGAGGACAAGGAACCTGG +
Preference number: 6 (lower is better)
Translates to: GCPAPGRGGNRG*SCRHSGGQGTW
Trigger: CCAGGTTCCTTGTCCTCCTGAATGACGGCAACTGCACCCTCTATTACCGCCTCTACCTGGAGCAGGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp CTGTTAAGCAGGTCCAGAGAGAAGAGGCGCCACAGGTaGTTCCGGGTGATACCCTCAGCACTGCCCATGGAG +
Preference number: 6 (lower is better)
Translates to: LLSRSREKRRHR*FRVIPSALPME
Trigger: CTCCATGGGCAGTGCTGAGGGTATCACCCGGAAGCACCTGTGGCGCCTCTTCTCTCTGGACCTGCTTAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341552.10
ENST00000413871.1
ENST00000453220.5
CDS GCA 72 bp CCCTGGCAGCCTGAGCAGAACTCCAGCATCACTGGATaGCAGTGGGACTGGGATCTCCAGGTAGTCACGGAT +
Preference number: 6 (lower is better)
Translates to: PWQPEQNSSITG*QWDWDLQVVTD
Trigger: ATCCGTGACTACCTGGAGATCCCAGTCCCACTGGCATCCAGTGATGCTGGAGTTCTGCTCAGGCTGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
CDS CCA 72 bp GTGGTTCCTGCTGTTCCTGGACCTCACGACGGAGCTTaGAGCCTGGGTGAGCATCATGTCCTTGGGACACAG +
Preference number: 6 (lower is better)
Translates to: VVPAVPGPHDGA*SLGEHHVLGTQ
Trigger: CTGTGTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCTCCGTCGTGAGGTCCAGGAACAGCAGGAACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295729.6
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000436631.5
ENST00000441968.5
ENST00000453220.5
ENST00000457968.5
ENST00000458526.1
ENST00000462848.5
ENST00000463683.1
CDS CAA 72 bp TGGGGACAGGCCGGCTTCCCAGACCCACATCCCCACTaGGAACAGGTACTTGGTCTCCTCCAAAGGGCTGAA +
Preference number: 6 (lower is better)
Translates to: WGQAGFPDPHPH*EQVLGLLQRAE
Trigger: TTCAGCCCTTTGGAGGAGACCAAGTACCTGTTCCAAGTGGGGATGTGGGTCTGGGAAGCCGGCCTGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 90 bp GTTGGCATTTGGGGACAGGCCGGCTTCCCAGACCCACATCCCCACTaGGAACAGGTACTTGGTCTCCTCCAAAGGGCTGAAGGTCCACGT +
Preference number: 6 (lower is better)
Translates to: VGIWGQAGFPDPHPH*EQVLGLLQRAEGPR
Trigger: ACGTGGACCTTCAGCCCTTTGGAGGAGACCAAGTACCTGTTCCAAGTGGGGATGTGGGTCTGGGAAGCCGGCCTGTCCCCAAATGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 90 bp TTGCTCCTCCTTCACCATGACATTCAGCTGCTGTTGCCACTGCCATaGCATGGACTCCTGGGACTCAGGCTGTGGTGTGGGCCCGATGCC +
Preference number: 6 (lower is better)
Translates to: LLLLHHDIQLLLPLP*HGLLGLRLWCGPDA
Trigger: GGCATCGGGCCCACACCACAGCCTGAGTCCCAGGAGTCCATGCAATGGCAGTGGCAACAGCAGCTGAATGTCATGGTGAAGGAGGAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 90 bp GTCCTGCACGCGCATCTGGTGGAGCTCAGTGGAATTCAACTCTGCTaGCTCTGCCCAGAGCTCCACGTCAATCCGCTGGTCACTTGGAAG +
Preference number: 6 (lower is better)
Translates to: VLHAHLVELSGIQLC*LCPELHVNPLVTWK
Trigger: CTTCCAAGTGACCAGCGGATTGACGTGGAGCTCTGGGCAGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGCGTGCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp TGTTCCTGGACCTCACGACGGAGCTTGGAGCCTGGGTaGGCATCATGTCCTTGGGACACAGTCCAAAGGGAG +
Preference number: 6 (lower is better)
Translates to: CSWTSRRSLEPG*ASCPWDTVQRE
Trigger: CTCCCTTTGGACTGTGTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCTCCGTCGTGAGGTCCAGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295729.6
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000436631.5
ENST00000441968.5
ENST00000453220.5
ENST00000457968.5
ENST00000458526.1
ENST00000462848.5
ENST00000463683.1
CDS TCA 72 bp AGAAGGGGCAGTCAGACCTTCGCGTCCAGACCACCATaGTCTTGCCCTTGGTGTGGTTCATCAGGCACAGGG +
Preference number: 6 (lower is better)
Translates to: RRGSQTFASRPP*SCPWCGSSGTG
Trigger: CCCTGTGCCTGATGAACCACACCAAGGGCAAGATCATGGTGGTCTGGACGCGAAGGTCTGACTGCCCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS TCA 72 bp GCTCTGGCAACAGGTGCTACCTGGCACCATGAGGAATaGGGCTGTACACGAGATCCAGGGCTTTGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: ALATGATWHHEE*GCTRDPGLCLG
Trigger: TCCCAGGCAAAGCCCTGGATCTCGTGTACAGCCTCATTCCTCATGGTGCCAGGTAGCACCTGTTGCCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS GCA 72 bp CACGCGCATCTGGTGGAGCTCAGTGGAATTCAACTCTaGTTGCTCTGCCCAGAGCTCCACGTCAATCCGCTG +
Preference number: 6 (lower is better)
Translates to: HAHLVELSGIQL*LLCPELHVNPL
Trigger: CAGCGGATTGACGTGGAGCTCTGGGCAGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp CCGATGAACAGGTGGCTGTATTTTAACTCCACCATCTaGTCCTGCCCAGGACTCAGGCTCCCAGCCTTGGGG +
Preference number: 6 (lower is better)
Translates to: PMNRWLYFNSTI*SCPGLRLPALG
Trigger: CCCCAAGGCTGGGAGCCTGAGTCCTGGGCAGGAGCAGATGGTGGAGTTAAAATACAGCCACCTGTTCATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp CTGCTGTTCCTGGACCTCACGACGGAGCTTGGAGCCTaGGTGAGCATCATGTCCTTGGGACACAGTCCAAAG +
Preference number: 6 (lower is better)
Translates to: LLFLDLTTELGA*VSIMSLGHSPK
Trigger: CTTTGGACTGTGTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCTCCGTCGTGAGGTCCAGGAACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295729.6
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000436631.5
ENST00000441968.5
ENST00000453220.5
ENST00000457968.5
ENST00000458526.1
ENST00000462848.5
ENST00000463683.1
CDS CCA 72 bp AGCACGATGCCATGGGCCGTGGGGCATGAGAAGGCCTaGTCTTCGGCCAGTTCATCCGGGGAAATTTCAATC +
Preference number: 6 (lower is better)
Translates to: STMPWAVGHEKA*SSASSSGEISI
Trigger: GATTGAAATTTCCCCGGATGAACTGGCCGAAGACCAGGCCTTCTCATGCCCCACGGCCCATGGCATCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
CDS CCA 72 bp ATTTCTTCTCTCCCGGAAGCACGATGCCATGGGCCGTaGGGCATGAGAAGGCCTGGTCTTCGGCCAGTTCAT +
Preference number: 6 (lower is better)
Translates to: ISSLPEARCHGP*GMRRPGLRPVH
Trigger: ATGAACTGGCCGAAGACCAGGCCTTCTCATGCCCCACGGCCCATGGCATCGTGCTTCCGGGAGAGAAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
CDS CCA 72 bp TCCGCTGTTCTTCAGGGCCAGGAATACCACGGAAGGTaGGGCCTTGAATGGTGCGGCCCCGAAATTGAAGTC +
Preference number: 6 (lower is better)
Translates to: SAVLQGQEYHGR*GLEWCGPEIEV
Trigger: GACTTCAATTTCGGGGCCGCACCATTCAAGGCCCCACCTTCCGTGGTATTCCTGGCCCTGAAGAACAGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341552.10
ENST00000413871.1
ENST00000453220.5
CDS CCA 72 bp GCTGGCATGCACAGAGGCCCTCAAGGTCACCACAAATaGGACCGTCTCTTCAGGAGCCACCACCCCTATCAT +
Preference number: 6 (lower is better)
Translates to: AGMHRGPQGHHK*DRLFRSHHPYH
Trigger: ATGATAGGGGTGGTGGCTCCTGAAGAGACGGTCCCATTTGTGGTGACCTTGAGGGCCTCTGTGCATGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 72 bp GGGCAGTCAGACCTTCGCGTCCAGACCACCATGATCTaGCCCTTGGTGTGGTTCATCAGGCACAGGGGTACA +
Preference number: 6 (lower is better)
Translates to: GQSDLRVQTTMI*PLVWFIRHRGT
Trigger: TGTACCCCTGTGCCTGATGAACCACACCAAGGGCAAGATCATGGTGGTCTGGACGCGAAGGTCTGACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CAA 72 bp GCGCATCTGGTGGAGCTCAGTGGAATTCAACTCTGCTaGCTCTGCCCAGAGCTCCACGTCAATCCGCTGGTC +
Preference number: 6 (lower is better)
Translates to: AHLVELSGIQLC*LCPELHVNPLV
Trigger: GACCAGCGGATTGACGTGGAGCTCTGGGCAGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 90 bp CTCATTCCAGAATTGGCGGAAGTACGGCACCTGCTCCACCAGGCTTaGGTCCACAGCCTCATGGAAGTTCTTGTCTTCCAGCAGGCCCCT +
Preference number: 6 (lower is better)
Translates to: LIPELAEVRHLLHQA*VHSLMEVLVFQQAP
Trigger: AGGGGCCTGCTGGAAGACAAGAACTTCCATGAGGCTGTGGACCAAAGCCTGGTGGAGCAGGTGCCGTACTTCCGCCAATTCTGGAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp GGTCTTCGGCCAGTTCATCCGGGGAAATTTCAATCCTaGAGGGGGCATTTACCGCCGACGGGTTGTGTAGCC +
Preference number: 6 (lower is better)
Translates to: GLRPVHPGKFQS*RGHLPPTGCVA
Trigger: GGCTACACAACCCGTCGGCGGTAAATGCCCCCTTCAGGATTGAAATTTCCCCGGATGAACTGGCCGAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
CDS TCA 72 bp TCATATGGGGGTTGTAGCCCACTCCCTGGAAGTGGATaGGGGCCGAGTTCCATCCCAGGATGTGTATGGGCA +
Preference number: 6 (lower is better)
Translates to: SYGGCSPLPGSG*GPSSIPGCVWA
Trigger: TGCCCATACACATCCTGGGATGGAACTCGGCCCTCATCCACTTCCAGGGAGTGGGCTACAACCCCCATATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp CTTCCCAGCTCTGGCAACAGGTGCTACCTGGCACCATaGGGAATGAGGCTGTACACGAGATCCAGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: LPSSGNRCYLAP*GMRLYTRSRAL
Trigger: CAAAGCCCTGGATCTCGTGTACAGCCTCATTCCTCATGGTGCCAGGTAGCACCTGTTGCCAGAGCTGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS GCA 72 bp TCTCCAAGCAGTCGATGGCAAACTGGAAGTGGGCCGTaGAGTCCGATTGGTTCTCAATCCACAGGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: SPSSRWQTGSGP*SPIGSQSTGAA
Trigger: AGCAGCCCCTGTGGATTGAGAACCAATCGGACTGCACGGCCCACTTCCAGTTTGCCATCGACTGCTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS GCA 72 bp CCTGCTCCAGGTAGAGGCGGTAATAGAGGGTGCAGTTaGCGTCATTCAGGAGGACAAGGAACCTGGACTGCT +
Preference number: 6 (lower is better)
Translates to: PAPGRGGNRGCS*RHSGGQGTWTA
Trigger: AGCAGTCCAGGTTCCTTGTCCTCCTGAATGACGGCAACTGCACCCTCTATTACCGCCTCTACCTGGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp CCAGCCTTGGGGCTGATGGAGAAGAGGCAATTGTCCTaGACGCGCATCTGGTGGAGCTCAGTGGAATTCAAC +
Preference number: 6 (lower is better)
Translates to: PALGLMEKRQLS*TRIWWSSVEFN
Trigger: GTTGAATTCCACTGAGCTCCACCAGATGCGCGTGCAGGACAATTGCCTCTTCTCCATCAGCCCCAAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp GTCTGCAGTTTCCAGCTGGCAGGCCGGCTGACAGACTaGTGGTTCTTGATGGGAGGCAGTGTCTTGTACTTC +
Preference number: 6 (lower is better)
Translates to: VCSFQLAGRLTD*WFLMGGSVLYF
Trigger: GAAGTACAAGACACTGCCTCCCATCAAGAACCAGCAGTCTGTCAGCCGGCCTGCCAGCTGGAAACTGCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp GACTGCTCATTCCAGAATTGGCGGAAGTACGGCACCTaGTCCACCAGGCTTTGGTCCACAGCCTCATGGAAG +
Preference number: 6 (lower is better)
Translates to: DCSFQNWRKYGT*STRLWSTASWK
Trigger: CTTCCATGAGGCTGTGGACCAAAGCCTGGTGGAGCAGGTGCCGTACTTCCGCCAATTCTGGAATGAGCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp CCTAGCAGAGACCCCGCATTCCTCCCTCTCATTGCGTaGACACACCTTATAGATGGCGAAGGCTTCGAGCTC +
Preference number: 6 (lower is better)
Translates to: PSRDPAFLPLIA*THLIDGEGFEL
Trigger: GAGCTCGAAGCCTTCGCCATCTATAAGGTGTGTGCACGCAATGAGAGGGAGGAATGCGGGGTCTCTGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 72 bp CCAAAGTACAACAGCTTCTGGAAGCCCTCGGCATCCTaGTCCTCCGGGCACTTGTGCTTTATGCTCACCAGC +
Preference number: 6 (lower is better)
Translates to: PKYNSFWKPSAS*SSGHLCFMLTS
Trigger: GCTGGTGAGCATAAAGCACAAGTGCCCGGAGGACCAGGATGCCGAGGGCTTCCAGAAGCTGTTGTACTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
CDS CCA 72 bp CAGGATCTCCCGGCCATGGGACACCTTGAAGAGCACTaGGAGGTGATCAGTACCGATGAACAGGTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: QDLPAMGHLEEH*EVISTDEQVAV
Trigger: TACAGCCACCTGTTCATCGGTACTGATCACCTCCCAGTGCTCTTCAAGGTGTCCCATGGCCGGGAGATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp TGCAGTTTCCAGCTGGCAGGCCGGCTGACAGACTGCTaGTTCTTGATGGGAGGCAGTGTCTTGTACTTCCTC +
Preference number: 6 (lower is better)
Translates to: CSFQLAGRLTDC*FLMGGSVLYFL
Trigger: GAGGAAGTACAAGACACTGCCTCCCATCAAGAACCAGCAGTCTGTCAGCCGGCCTGCCAGCTGGAAACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GAGCAGAACTCCAGCATCACTGGATGCCAGTGGGACTaGGATCTCCAGGTAGTCACGGATGATTCCCCACAG +
Preference number: 6 (lower is better)
Translates to: EQNSSITGCQWD*DLQVVTDDSPQ
Trigger: CTGTGGGGAATCATCCGTGACTACCTGGAGATCCCAGTCCCACTGGCATCCAGTGATGCTGGAGTTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
CDS CCA 72 bp CAGCCTGAGCAGAACTCCAGCATCACTGGATGCCAGTaGGACTGGGATCTCCAGGTAGTCACGGATGATTCC +
Preference number: 6 (lower is better)
Translates to: QPEQNSSITGCQ*DWDLQVVTDDS
Trigger: GGAATCATCCGTGACTACCTGGAGATCCCAGTCCCACTGGCATCCAGTGATGCTGGAGTTCTGCTCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
CDS CCA 72 bp TCCTTGTCATGGAGGAGAGGGTCTGCTTCCCAGCTCTaGCAACAGGTGCTACCTGGCACCATGAGGAATGAG +
Preference number: 6 (lower is better)
Translates to: SLSWRRGSASQL*QQVLPGTMRNE
Trigger: CTCATTCCTCATGGTGCCAGGTAGCACCTGTTGCCAGAGCTGGGAAGCAGACCCTCTCCTCCATGACAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS CAA 72 bp TCAGACCTTCGCGTCCAGACCACCATGATCTTGCCCTaGGTGTGGTTCATCAGGCACAGGGGTACAGGGTTG +
Preference number: 6 (lower is better)
Translates to: SDLRVQTTMILP*VWFIRHRGTGL
Trigger: CAACCCTGTACCCCTGTGCCTGATGAACCACACCAAGGGCAAGATCATGGTGGTCTGGACGCGAAGGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS TCA 72 bp CAGCCTTGTTATCTCTGTGGGAAAGGAGAGAGTAGGTaGTGGTCCAGGAGTACTGGGACCGCTGCTTGGGAC +
Preference number: 6 (lower is better)
Translates to: QPCYLCGKGESR*WSRSTGTAAWD
Trigger: GTCCCAAGCAGCGGTCCCAGTACTCCTGGACCATCACCTACTCTCTCCTTTCCCACAGAGATAACAAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp CCTTCCACTCCTGCAGCTCCTTGTGATACTGCCTCATaGGCTGCTGCGAGTACAGCTTGCATACCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: PSTPAAPCDTAS*AAASTACIPGL
Trigger: CAGACCTGGTATGCAAGCTGTACTCGCAGCAGCTCATGAGGCAGTATCACAAGGAGCTGCAGGAGTGGAAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp CATGAGCTGCTGCGAGTACAGCTTGCATACCAGGTCTaGACTGTAGAAGCTGGCATGCACAGAGGCCCTCAA +
Preference number: 6 (lower is better)
Translates to: HELLRVQLAYQV*TVEAGMHRGPQ
Trigger: TTGAGGGCCTCTGTGCATGCCAGCTTCTACAGTGCAGACCTGGTATGCAAGCTGTACTCGCAGCAGCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp TTCACTTTCATGTCGGTGATGGTGAACTCCACTTCCTaGCGCACCTTCTCGTCCTTCCACTCCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: FTFMSVMVNSTS*RTFSSFHSCSS
Trigger: GGAGCTGCAGGAGTGGAAGGACGAGAAGGTGCGGCAGGAAGTGGAGTTCACCATCACCGACATGAAAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp TCCTCCTTCACCATGACATTCAGCTGCTGTTGCCACTaGCATTGCATGGACTCCTGGGACTCAGGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: SSFTMTFSCCCH*HCMDSWDSGCG
Trigger: ACCACAGCCTGAGTCCCAGGAGTCCATGCAATGGCAGTGGCAACAGCAGCTGAATGTCATGGTGAAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp GGGAGCCTTCTGATGGCCTCCTTCTCGTCCTGTTCTTaGTCCTCCTTCACCATGACATTCAGCTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: GSLLMASFSSCS*SSFTMTFSCCC
Trigger: GCAACAGCAGCTGAATGTCATGGTGAAGGAGGAGCAAGAACAGGACGAGAAGGAGGCCATCAGAAGGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GGGTGCAGTTGCCGTCATTCAGGAGGACAAGGAACCTaGACTGCTTGCTGTTCACCAGCACATTCCCAAAGG +
Preference number: 6 (lower is better)
Translates to: GCSCRHSGGQGT*TACCSPAHSQR
Trigger: CCTTTGGGAATGTGCTGGTGAACAGCAAGCAGTCCAGGTTCCTTGTCCTCCTGAATGACGGCAACTGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp AATTGGCGGAAGTACGGCACCTGCTCCACCAGGCTTTaGTCCACAGCCTCATGGAAGTTCTTGTCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: NWRKYGTCSTRL*STASWKFLSSS
Trigger: GCTGGAAGACAAGAACTTCCATGAGGCTGTGGACCAAAGCCTGGTGGAGCAGGTGCCGTACTTCCGCCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 72 bp TTCTTCAGGGCCAGGAATACCACGGAAGGTGGGGCCTaGAATGGTGCGGCCCCGAAATTGAAGTCAAGCCTT +
Preference number: 6 (lower is better)
Translates to: FFRARNTTEGGA*NGAAPKLKSSL
Trigger: AAGGCTTGACTTCAATTTCGGGGCCGCACCATTCAAGGCCCCACCTTCCGTGGTATTCCTGGCCCTGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341552.10
ENST00000413871.1
ENST00000453220.5
CDS CAA 72 bp GAATTGGCGGAAGTACGGCACCTGCTCCACCAGGCTTaGGTCCACAGCCTCATGGAAGTTCTTGTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: ELAEVRHLLHQA*VHSLMEVLVFQ
Trigger: CTGGAAGACAAGAACTTCCATGAGGCTGTGGACCAAAGCCTGGTGGAGCAGGTGCCGTACTTCCGCCAATTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 90 bp AAGACATTCTGTCCAGGCACCACCAGCCTAGAGTGTATGGAACTGTaGTCCCACGAGGAGATGTTGTGGAATGGGGCTGTGTCCCCCATC +
Preference number: 6 (lower is better)
Translates to: KTFCPGTTSLECMEL*SHEEMLWNGAVSPI
Trigger: GATGGGGGACACAGCCCCATTCCACAACATCTCCTCGTGGGACAACAGTTCCATACACTCTAGGCTGGTGGTGCCTGGACAGAATGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 90 bp GGACTTGGCTGCCAGGAGAAGGCAATTTCCTCGTTCTTGGAGATGTaGTTGAGGAAGAGCAGGCGGCTGCACTTGCTCTGCACAGGTATG +
Preference number: 6 (lower is better)
Translates to: GLGCQEKAISSFLEM*LRKSRRLHLLCTGM
Trigger: CATACCTGTGCAGAGCAAGTGCAGCCGCCTGCTCTTCCTCAACAACATCTCCAAGAACGAGGAAATTGCCTTCTCCTGGCAGCCAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp CCTCCTTCTCGTCCTGTTCTTGCTCCTCCTTCACCATaGCATTCAGCTGCTGTTGCCACTGCCATTGCATGG +
Preference number: 6 (lower is better)
Translates to: PPSRPVLAPPSP*HSAAVATAIAW
Trigger: CCATGCAATGGCAGTGGCAACAGCAGCTGAATGTCATGGTGAAGGAGGAGCAAGAACAGGACGAGAAGGAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp AAGAGAGCCTGCTTTCGGGGCTCAAGGCTGTGGCACTaGGTCCTTGATCCCTTATACTGGTACCTGTACTTC +
Preference number: 6 (lower is better)
Translates to: KRACFRGSRLWH*VLDPLYWYLYF
Trigger: GAAGTACAGGTACCAGTATAAGGGATCAAGGACCCAGTGCCACAGCCTTGAGCCCCGAAAGCAGGCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS CCA 72 bp GTTTTGAAGAGAGCCTGCTTTCGGGGCTCAAGGCTGTaGCACTGGGTCCTTGATCCCTTATACTGGTACCTG +
Preference number: 6 (lower is better)
Translates to: VLKRACFRGSRL*HWVLDPLYWYL
Trigger: CAGGTACCAGTATAAGGGATCAAGGACCCAGTGCCACAGCCTTGAGCCCCGAAAGCAGGCTCTCTTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS CCA 72 bp AAGACACTCTCCAAGCAGTCGATGGCAAACTGGAAGTaGGCCGTGCAGTCCGATTGGTTCTCAATCCACAGG +
Preference number: 6 (lower is better)
Translates to: KTLSKQSMANWK*AVQSDWFSIHR
Trigger: CCTGTGGATTGAGAACCAATCGGACTGCACGGCCCACTTCCAGTTTGCCATCGACTGCTTGGAGAGTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 72 bp ATGGAGAAGAGGCAATTGTCCTGCACGCGCATCTGGTaGAGCTCAGTGGAATTCAACTCTGCTTGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: MEKRQLSCTRIW*SSVEFNSACSA
Trigger: GGCAGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGCGTGCAGGACAATTGCCTCTTCTCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GGGGGTAGCGTGTCACCAATGGGAATGGGGATGAACTaGTGGGTAGTAGAGGTGAAGTGCACATACTTCTGC +
Preference number: 6 (lower is better)
Translates to: GGSVSPMGMGMN*WVVEVKCTYFC
Trigger: GCAGAAGTATGTGCACTTCACCTCTACTACCCACCAGTTCATCCCCATTCCCATTGGTGACACGCTACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp TATGGAACTGTTGTCCCACGAGGAGATGTTGTGGAATaGGGCTGTGTCCCCCATCATATGGGGGTTGTAGCC +
Preference number: 6 (lower is better)
Translates to: YGTVVPRGDVVE*GCVPHHMGVVA
Trigger: GGCTACAACCCCCATATGATGGGGGACACAGCCCCATTCCACAACATCTCCTCGTGGGACAACAGTTCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 72 bp CTAGAGTGTATGGAACTGTTGTCCCACGAGGAGATGTaGTGGAATGGGGCTGTGTCCCCCATCATATGGGGG +
Preference number: 6 (lower is better)
Translates to: LECMELLSHEEM*WNGAVSPIIWG
Trigger: CCCCCATATGATGGGGGACACAGCCCCATTCCACAACATCTCCTCGTGGGACAACAGTTCCATACACTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 90 bp AGGGTGCAGTTGCCGTCATTCAGGAGGACAAGGAACCTGGACTGCTaGCTGTTCACCAGCACATTCCCAAAGGCCAGCTCCTTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: RVQLPSFRRTRNLDC*LFTSTFPKASSFSF
Trigger: AAAGGAAAAGGAGCTGGCCTTTGGGAATGTGCTGGTGAACAGCAAGCAGTCCAGGTTCCTTGTCCTCCTGAATGACGGCAACTGCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp CTGCTTTCGGGGCTCAAGGCTGTGGCACTGGGTCCTTaGTCCCTTATACTGGTACCTGTACTTCATCTTCTG +
Preference number: 6 (lower is better)
Translates to: LLSGLKAVALGP*SLILVPVLHLL
Trigger: CAGAAGATGAAGTACAGGTACCAGTATAAGGGATCAAGGACCCAGTGCCACAGCCTTGAGCCCCGAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS TCA 72 bp TCCCGGCCATGGGACACCTTGAAGAGCACTGGGAGGTaGTCAGTACCGATGAACAGGTGGCTGTATTTTAAC +
Preference number: 6 (lower is better)
Translates to: SRPWDTLKSTGR*SVPMNRWLYFN
Trigger: GTTAAAATACAGCCACCTGTTCATCGGTACTGATCACCTCCCAGTGCTCTTCAAGGTGTCCCATGGCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp CAGGACATCGGTCTGGACCTCATATGTCACGGGCACTaGGCCACCATTATACAGCTCATAAATCTGCCGTGG +
Preference number: 6 (lower is better)
Translates to: QDIGLDLICHGH*ATIIQLINLPW
Trigger: CCACGGCAGATTTATGAGCTGTATAATGGTGGCTCAGTGCCCGTGACATATGAGGTCCAGACCGATGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp AGGAGAAGGCAATTTCCTCGTTCTTGGAGATGTTGTTaGGGAAGAGCAGGCGGCTGCACTTGCTCTGCACAG +
Preference number: 6 (lower is better)
Translates to: RRRQFPRSWRCC*GRAGGCTCSAQ
Trigger: CTGTGCAGAGCAAGTGCAGCCGCCTGCTCTTCCTCAACAACATCTCCAAGAACGAGGAAATTGCCTTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp TGGCAGCTCCCGGTGCAAAAAGTGGCAGGGAAACTCTaGGAAGAAGTTAGCCAGAAAGTAGTCGGTGGCATG +
Preference number: 6 (lower is better)
Translates to: WQLPVQKVAGKL*EEVSQKVVGGM
Trigger: CATGCCACCGACTACTTTCTGGCTAACTTCTTCTCAGAGTTTCCCTGCCACTTTTTGCACCGGGAGCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp GGAATGGGGATGAACTGGTGGGTAGTAGAGGTGAAGTaGACATACTTCTGCTCCGGCTTCACTGTCACACCT +
Preference number: 6 (lower is better)
Translates to: GMGMNWWVVEVK*TYFCSGFTVTP
Trigger: AGGTGTGACAGTGAAGCCGGAGCAGAAGTATGTGCACTTCACCTCTACTACCCACCAGTTCATCCCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp CTGATGGAGAAGAGGCAATTGTCCTGCACGCGCATCTaGTGGAGCTCAGTGGAATTCAACTCTGCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: LMEKRQLSCTRI*WSSVEFNSACS
Trigger: AGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGCGTGCAGGACAATTGCCTCTTCTCCATCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GGTAGCGTGTCACCAATGGGAATGGGGATGAACTGGTaGGTAGTAGAGGTGAAGTGCACATACTTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GSVSPMGMGMNW*VVEVKCTYFCS
Trigger: GGAGCAGAAGTATGTGCACTTCACCTCTACTACCCACCAGTTCATCCCCATTCCCATTGGTGACACGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp AGTACAGCTTGCATACCAGGTCTGCACTGTAGAAGCTaGCATGCACAGAGGCCCTCAAGGTCACCACAAATG +
Preference number: 6 (lower is better)
Translates to: STACIPGLHCRS*HAQRPSRSPQM
Trigger: CATTTGTGGTGACCTTGAGGGCCTCTGTGCATGCCAGCTTCTACAGTGCAGACCTGGTATGCAAGCTGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp TGGTCCATGAACTTAGTTGACTGCTCATTCCAGAATTaGCGGAAGTACGGCACCTGCTCCACCAGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: WSMNLVDCSFQN*RKYGTCSTRLW
Trigger: CCAAAGCCTGGTGGAGCAGGTGCCGTACTTCCGCCAATTCTGGAATGAGCAGTCAACTAAGTTCATGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp ATTCCTCCCTCTCATTGCGTGCACACACCTTATAGATaGCGAAGGCTTCGAGCTCCACCGTGTAAAGGCAGT +
Preference number: 6 (lower is better)
Translates to: IPPSHCVHTPYR*RRLRAPPCKGS
Trigger: ACTGCCTTTACACGGTGGAGCTCGAAGCCTTCGCCATCTATAAGGTGTGTGCACGCAATGAGAGGGAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CAA 72 bp CCTGCTTTCGGGGCTCAAGGCTGTGGCACTGGGTCCTaGATCCCTTATACTGGTACCTGTACTTCATCTTCT +
Preference number: 6 (lower is better)
Translates to: PAFGAQGCGTGS*IPYTGTCTSSS
Trigger: AGAAGATGAAGTACAGGTACCAGTATAAGGGATCAAGGACCCAGTGCCACAGCCTTGAGCCCCGAAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295729.6
CDS CAA 72 bp TGGGACTCACAGACACCTCCCCAAAATCTAGAGGACTaGGCTGCCAGGAGAAGGCAATTTCCTCGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: WDSQTPPQNLED*AARRRQFPRSW
Trigger: CCAAGAACGAGGAAATTGCCTTCTCCTGGCAGCCAAGTCCTCTAGATTTTGGGGAGGTGTCTGTGAGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 72 bp TCCACCAGGCTTTGGTCCACAGCCTCATGGAAGTTCTaGTCTTCCAGCAGGCCCCTGATTATTGTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: STRLWSTASWKF*SSSRPLIIVVR
Trigger: TCTCACCACAATAATCAGGGGCCTGCTGGAAGACAAGAACTTCCATGAGGCTGTGGACCAAAGCCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CAA 90 bp CTTGGCTGCCAGGAGAAGGCAATTTCCTCGTTCTTGGAGATGTTGTaGAGGAAGAGCAGGCGGCTGCACTTGCTCTGCACAGGTATGTTT +
Preference number: 6 (lower is better)
Translates to: LGCQEKAISSFLEML*RKSRRLHLLCTGMF
Trigger: AAACATACCTGTGCAGAGCAAGTGCAGCCGCCTGCTCTTCCTCAACAACATCTCCAAGAACGAGGAAATTGCCTTCTCCTGGCAGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp CACTTGCTCTGCACAGGTATGTTTCCCAGGGAAATATaGGACTGGGACAGGAAGACATTCTGTCCAGGCACC +
Preference number: 6 (lower is better)
Translates to: HLLCTGMFPREI*DWDRKTFCPGT
Trigger: GGTGCCTGGACAGAATGTCTTCCTGTCCCAGTCTCATATTTCCCTGGGAAACATACCTGTGCAGAGCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp ATGGTAAAGACACTCTCCAAGCAGTCGATGGCAAACTaGAAGTGGGCCGTGCAGTCCGATTGGTTCTCAATC +
Preference number: 6 (lower is better)
Translates to: MVKTLSKQSMAN*KWAVQSDWFSI
Trigger: GATTGAGAACCAATCGGACTGCACGGCCCACTTCCAGTTTGCCATCGACTGCTTGGAGAGTGTCTTTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341552.10
ENST00000409865.7
ENST00000410037.5
ENST00000441968.5
ENST00000453220.5
ENST00000462848.5
ENST00000463683.1
ENST00000474601.1
CDS CCA 72 bp CCATGGCCACACTTGGCACTGCTCAGCAAGCTCCAGTaGGTGTTACTGAAGTGTGTGCATTACCTTTATCTG +
Preference number: 6 (lower is better)
Translates to: PWPHLALLSKLQ*VLLKCVHYLYL
Trigger: CAGATAAAGGTAATGCACACACTTCAGTAACACCCACTGGAGCTTGCTGAGCAGTGCCAAGTGTGGCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS TCA 72 bp GGTCTTCGGCCAGTTCATCCGGGGAAATTTCAATCCTaGAGGGGGCATTTACCTGTACTTCATCTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: GLRPVHPGKFQS*RGHLPVLHLLE
Trigger: CTCCAGAAGATGAAGTACAGGTAAATGCCCCCTTCAGGATTGAAATTTCCCCGGATGAACTGGCCGAAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS GCA 72 bp CCCCTGATTATTGTGGTGAGAATGTCAACCAGGAGCTaGTTCTTCTGCTTGGAAACAGGGCCCCACTTGTTA +
Preference number: 6 (lower is better)
Translates to: PLIIVVRMSTRS*FFCLETGPHLL
Trigger: TAACAAGTGGGGCCCTGTTTCCAAGCAGAAGAAGCAGCTCCTGGTTGACATTCTCACCACAATAATCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp ATTGTGGTGAGAATGTCAACCAGGAGCTGCTTCTTCTaGTTGGAAACAGGGCCCCACTTGTTAGGGGATTTT +
Preference number: 6 (lower is better)
Translates to: IVVRMSTRSCFF*LETGPHLLGDF
Trigger: AAAATCCCCTAACAAGTGGGGCCCTGTTTCCAAGCAGAAGAAGCAGCTCCTGGTTGACATTCTCACCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS GCA 72 bp TACAGGCTGTTTTTCTGGTCCATGAACTTAGTTGACTaGTCATTCCAGAATTGGCGGAAGTACGGCACCTGC +
Preference number: 6 (lower is better)
Translates to: YRLFFWSMNLVD*SFQNWRKYGTC
Trigger: GCAGGTGCCGTACTTCCGCCAATTCTGGAATGAGCAGTCAACTAAGTTCATGGACCAGAAAAACAGCCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS TCA 72 bp ACTTGGCACTGCTCAGCAAGCTCCAGTGGGTGTTACTaGAGTGTGTGCATTACCTTTATCTGGCTTTTACTC +
Preference number: 6 (lower is better)
Translates to: TWHCSASSSGCY*SVCITFIWLLL
Trigger: GAGTAAAAGCCAGATAAAGGTAATGCACACACTTCAGTAACACCCACTGGAGCTTGCTGAGCAGTGCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463683.1
CDS GCA 72 bp AACTGGTGGGTAGTAGAGGTGAAGTGCACATACTTCTaGTCCGGCTTCACTGTCACACCTATGAAATTTAGC +
Preference number: 6 (lower is better)
Translates to: NWWVVEVKCTYF*SGFTVTPMKFS
Trigger: GCTAAATTTCATAGGTGTGACAGTGAAGCCGGAGCAGAAGTATGTGCACTTCACCTCTACTACCCACCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341552.10
ENST00000453220.5
CDS CCA 72 bp GAAGAGGCAAATGAGACTGATGGATTCTCCACCTTCTaGGTTTTCTCCACCAGTCTACAACCGGTTAAGGTA +
Preference number: 6 (lower is better)
Translates to: EEANETDGFSTF*VFSTSLQPVKV
Trigger: TACCTTAACCGGTTGTAGACTGGTGGAGAAAACCCAGAAGGTGGAGAATCCATCAGTCTCATTTGCCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341552.10
ENST00000453220.5
ENST00000463683.1
CDS TCA 72 bp ACTCTTGCCTCTCCAATTGTGAACTGGACGTTCAGATaGAATCAAAGAAATGTAAGCTTCCCTGGCCACTCG +
Preference number: 6 (lower is better)
Translates to: TLASPIVNWTFR*NQRNVSFPGHS
Trigger: CGAGTGGCCAGGGAAGCTTACATTTCTTTGATTTCATCTGAACGTCCAGTTCACAATTGGAGAGGCAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458526.1
CDS TCA 72 bp GAGTATGGAGCTCCAATTGTGAACTGGACGTTCAGATaGAATCAAAGAAATGTAAGATCGCCTCCATATTGC +
Preference number: 6 (lower is better)
Translates to: EYGAPIVNWTFR*NQRNVRSPPYC
Trigger: GCAATATGGAGGCGATCTTACATTTCTTTGATTTCATCTGAACGTCCAGTTCACAATTGGAGCTCCATACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295729.6
ENST00000410037.5
CDS TCA 72 bp ACTCTTGCCTCTCCAATTGTGAACTGGACGTTCAGATaGAATCAAAGAAATGTAAGATCGCCTCCATATTGC +
Preference number: 6 (lower is better)
Translates to: TLASPIVNWTFR*NQRNVRSPPYC
Trigger: GCAATATGGAGGCGATCTTACATTTCTTTGATTTCATCTGAACGTCCAGTTCACAATTGGAGAGGCAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409865.7
ENST00000457968.5
ENST00000462848.5
CDS TCA 72 bp ACACTCTTGCCTCCAATTGTGAACTGGACGTTCAGATaGAATCAAAGAAATGTAAGATCGCCTCCATATTGC +
Preference number: 6 (lower is better)
Translates to: TLLPPIVNWTFR*NQRNVRSPPYC
Trigger: GCAATATGGAGGCGATCTTACATTTCTTTGATTTCATCTGAACGTCCAGTTCACAATTGGAGGCAAGAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436631.5
CDS TCA 72 bp GTAAACATCACTCCAATTGTGAACTGGACGTTCAGATaGAATCAAAGAAATGTAAGATCGCCTCCATATTGC +
Preference number: 6 (lower is better)
Translates to: VNITPIVNWTFR*NQRNVRSPPYC
Trigger: GCAATATGGAGGCGATCTTACATTTCTTTGATTTCATCTGAACGTCCAGTTCACAATTGGAGTGATGTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341552.10