RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP57 (Homo sapiens)

Ensembl gene IDs: ENSG00000243710

Ensembl transcript IDs: ENST00000372492.9, ENST00000428122.1, ENST00000525227.5, ENST00000528956.5, ENST00000529956.5, ENST00000533339.1, ENST00000534615.1, ENST00000610710.4

Found 850 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCTCCTTTCAGTCTGGGGCATTCTCTGGAGGAGGAGGCAGCTGTaGTCAAGTGCAGCCCACACTCACGGCAGCTACGGCATCCACCAA +
Preference number: 1 (lower is better)
Translates to: WLLSVWGILWRRRQL*SSAAHTHGSYGIHQ
Trigger: TTGGTGGATGCCGTAGCTGCCGTGAGTGTGGGCTGCACTTGACCACAGCTGCCTCCTCCTCCAGAGAATGCCCCAGACTGAAAGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CCA 90 bp GGGAGAGGTAGGGGCCAATCTTCAGGGCTATGGCTCCTTTCAGTCTaGGGCATTCTCTGGAGGAGGAGGCAGCTGTGGTCAAGTGCAGCC +
Preference number: 1 (lower is better)
Translates to: GRGRGQSSGLWLLSV*GILWRRRQLWSSAA
Trigger: GGCTGCACTTGACCACAGCTGCCTCCTCCTCCAGAGAATGCCCCAGACTGAAAGGAGCCATAGCCCTGAAGATTGGCCCCTACCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR GCA 90 bp GGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATaGTGTGTTTCTTCTGGCTGTGGCTGGAGATGGCTCACCAGAGGG +
Preference number: 1 (lower is better)
Translates to: GTIQTPTASLAWGQT*CVSSGCGWRWLTRG
Trigger: CCCTCTGGTGAGCCATCTCCAGCCACAGCCAGAAGAAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
3UTR CCA 90 bp CTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTaGCTTGGGGACAGACATGCTGTGTTTCTTCTGGCTGTGGCTGGA +
Preference number: 1 (lower is better)
Translates to: LGSVLQGPYRLQPQV*LGDRHAVFLLAVAG
Trigger: TCCAGCCACAGCCAGAAGAAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
3UTR CCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTaGGGACAGACATGCTGTGTTTCTTCTGGCTGTGGCTGGAGATGG +
Preference number: 1 (lower is better)
Translates to: VSAAGTIQTPTASLA*GQTCCVSSGCGWRW
Trigger: CCATCTCCAGCCACAGCCAGAAGAAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
3UTR CCA 90 bp TCCCTGGCCCAGCAGAACAGGCAAATCCCTTTGAATAGGCTGCAATaGCAAACACCTGGGGCATGGACATCTGGCTATGGCTACTGGCCG +
Preference number: 1 (lower is better)
Translates to: SLAQQNRQIPLNRLQ*QTPGAWTSGYGYWP
Trigger: CGGCCAGTAGCCATAGCCAGATGTCCATGCCCCAGGTGTTTGCCATTGCAGCCTATTCAAAGGGATTTGCCTGTTCTGCTGGGCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR GCA 90 bp TTGGTGATAGGACCGGCATGGGCCTGGTACTCATTGAATTCCTTCTaGAGAGGCAGAGGGTACTTCATGGCACGAATGGTTCCCACCGAG +
Preference number: 1 (lower is better)
Translates to: LVIGPAWAWYSLNSF*RGRGYFMARMVPTE
Trigger: CTCGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCCATGCCGGTCCTATCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR TCA 90 bp GCTGTAGAGTTGGTTCTTACTGGTGCTGGCAACCAGAGTTTCCTCTaGGGGGCTGAAGCACAGGCAGAGAACGTCCTGTTTGTCAGACTG +
Preference number: 1 (lower is better)
Translates to: AVELVLTGAGNQSFL*GAEAQAENVLFVRL
Trigger: CAGTCTGACAAACAGGACGTTCTCTGCCTGTGCTTCAGCCCCTCAGAGGAAACTCTGGTTGCCAGCACCAGTAAGAACCAACTCTACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR GCA 90 bp ACCTTTATTCTGTGTCCCAAATTCCCCAGGGCAAGAGAAAGAGGTTaGTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAG +
Preference number: 1 (lower is better)
Translates to: TFILCPKFPRARERG*WGQCCRDHTDSNRK
Trigger: CTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCTTTCTCTTGCCCTGGGGAATTTGGGACACAGAATAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
3UTR CCA 90 bp AGGCAAATCCCTTTGAATAGGCTGCAATGGCAAACACCTGGGGCATaGACATCTGGCTATGGCTACTGGCCGCCACCATCTGTTCATAGG +
Preference number: 1 (lower is better)
Translates to: RQIPLNRLQWQTPGA*TSGYGYWPPPSVHR
Trigger: CCTATGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGATGTCCATGCCCCAGGTGTTTGCCATTGCAGCCTATTCAAAGGGATTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CCA 90 bp GGGGCTGAAGCACAGGCAGAGAACGTCCTGTTTGTCAGACTGACTTaGATCATTGCTCTGCGGGTCCACAGGAATCCTGATTTCTCTGCT +
Preference number: 1 (lower is better)
Translates to: GAEAQAENVLFVRLT*IIALRVHRNPDFSA
Trigger: AGCAGAGAAATCAGGATTCCTGTGGACCCGCAGAGCAATGATCCAAGTCAGTCTGACAAACAGGACGTTCTCTGCCTGTGCTTCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR TCA 90 bp GTTGGTTCTTACTGGTGCTGGCAACCAGAGTTTCCTCTGAGGGGCTaGAGCACAGGCAGAGAACGTCCTGTTTGTCAGACTGACTTGGAT +
Preference number: 1 (lower is better)
Translates to: VGSYWCWQPEFPLRG*STGRERPVCQTDLD
Trigger: ATCCAAGTCAGTCTGACAAACAGGACGTTCTCTGCCTGTGCTTCAGCCCCTCAGAGGAAACTCTGGTTGCCAGCACCAGTAAGAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR GCA 90 bp TGCTGGTCTCCCAACGCTGATCTCCAGATTCAAAGAGGAAGAGTTTaGCTGTGTCAGTGCCAACGACAATCTTGTCATCAGCCACCCAGG +
Preference number: 1 (lower is better)
Translates to: CWSPNADLQIQRGRV*LCQCQRQSCHQPPR
Trigger: CCTGGGTGGCTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTCCTCTTTGAATCTGGAGATCAGCGTTGGGAGACCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR TCA 90 bp GAGCCATTGGTAGGTTCCTTGACCATTATGCTGGTCTCCCAACGCTaGTCTCCAGATTCAAAGAGGAAGAGTTTGCCTGTGTCAGTGCCA +
Preference number: 1 (lower is better)
Translates to: EPLVGSLTIMLVSQR*SPDSKRKSLPVSVP
Trigger: TGGCACTGACACAGGCAAACTCTTCCTCTTTGAATCTGGAGATCAGCGTTGGGAGACCAGCATAATGGTCAAGGAACCTACCAATGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR GCA 90 bp AACGCTGATCTCCAGATTCAAAGAGGAAGAGTTTGCCTGTGTCAGTaGCAACGACAATCTTGTCATCAGCCACCCAGGTGTGAGCTAGAT +
Preference number: 1 (lower is better)
Translates to: NADLQIQRGRVCLCQ*QRQSCHQPPRCELD
Trigger: ATCTAGCTCACACCTGGGTGGCTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTCCTCTTTGAATCTGGAGATCAGCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR TCA 90 bp CTCTCGAAGGATCAAGGAATCTGCAATCTCCTTGAGGGTGTGGTCTaGTCCAACAGCAAAGATAATTTTGGCATCGGGGGAGACAGTAAC +
Preference number: 1 (lower is better)
Translates to: LSKDQGICNLLEGVV*SNSKDNFGIGGDSN
Trigger: GTTACTGTCTCCCCCGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGAGATTGCAGATTCCTTGATCCTTCGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CCA 90 bp TCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTaGGACTTGAGCTGCAGCTCCTGGTACTTCTCATATTCTAGAAGC +
Preference number: 1 (lower is better)
Translates to: SSLSRSCFSYSSCIL*DLSCSSWYFSYSRS
Trigger: GCTTCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR GCA 90 bp CGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTTGAGCTaGAGCTCCTGGTACTTCTCATATTCTAGAAGCAACTTTTGGTTG +
Preference number: 1 (lower is better)
Translates to: RSCFSYSSCILWDLS*SSWYFSYSRSNFWL
Trigger: CAACCAAAAGTTGCTTCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR CCA 90 bp GATATCTCTCGAAGGATCAAGGAATCTGCAATCTCCTTGAGGGTGTaGTCTGATCCAACAGCAAAGATAATTTTGGCATCGGGGGAGACA +
Preference number: 1 (lower is better)
Translates to: DISRRIKESAISLRV*SDPTAKIILASGET
Trigger: TGTCTCCCCCGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGAGATTGCAGATTCCTTGATCCTTCGAGAGATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR TCA 90 bp TATCCCGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTTaGGCTGCAGCTCCTGGTACTTCTCATATTCTAGAAGCAACTTTT +
Preference number: 1 (lower is better)
Translates to: YPGAVFHTLPASSGT*AAAPGTSHILEATF
Trigger: AAAAGTTGCTTCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTCCGGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR GCA 90 bp GATTCCATTCATACACAGCACCATCTGTGCCACCAGAAATCAGTTTaGTATCATCTGCATTCCACACAATTGAGCGAATCTTCCCTGTGT +
Preference number: 1 (lower is better)
Translates to: DSIHTQHHLCHQKSV*YHLHSTQLSESSLC
Trigger: ACACAGGGAAGATTCGCTCAATTGTGTGGAATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGTATGAATGGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CCA 90 bp TTTTCATACTCTTCCTGCATCCTCTGGGACTTGAGCTGCAGCTCCTaGTACTTCTCATATTCTAGAAGCAACTTTTGGTTGTTGCAACAT +
Preference number: 1 (lower is better)
Translates to: FSYSSCILWDLSCSS*YFSYSRSNFWLLQH
Trigger: ATGTTGCAACAACCAAAAGTTGCTTCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR TCA 90 bp GAAGTCAAAATTATTAAGAACTTTGCGCTTCCGGCAAGGGATGGATaGCAATTCATAAATGGTGATGGCAGGTTTTTCTTGCACAGTCTC +
Preference number: 1 (lower is better)
Translates to: EVKIIKNFALPARDG*QFINGDGRFFLHSL
Trigger: GAGACTGTGCAAGAAAAACCTGCCATCACCATTTATGAATTGTCATCCATCCCTTGCCGGAAGCGCAAAGTTCTTAATAATTTTGACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR TCA 90 bp CGTAGTTTGTCAGCAAACCCTACTACAATGAAGTGTCCAGATGGATaGAGGCTGATGGAATATGCCTCTTCTTGGTATTCCTTAAATAGT +
Preference number: 1 (lower is better)
Translates to: RSLSANPTTMKCPDG*RLMEYASSWYSLNS
Trigger: ACTATTTAAGGAATACCAAGAAGAGGCATATTCCATCAGCCTTCATCCATCTGGACACTTCATTGTAGTAGGGTTTGCTGACAAACTACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR GCA 90 bp AGGCAGGGTATTGTTCCATTGTATAGATATACCATCTTTTGCTTATaGATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGAC +
Preference number: 1 (lower is better)
Translates to: RQGIVPLYRYTIFCL*IRLSMDAWLLPHFD
Trigger: GTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAATACCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR TCA 90 bp CTACGGCATCCACCAAACGGCCCCTTATTATGCATAATATTATGGTaGAAACGTTGTACATACATTTTTAGGTGTATCTCTGATGATTTC +
Preference number: 1 (lower is better)
Translates to: LRHPPNGPLLCIILW*KRCTYIFRCISDDF
Trigger: GAAATCATCAGAGATACACCTAAAAATGTATGTACAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGATGCCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR GCA 90 bp CTTTTTCTGTTCTTAAGACTGTTTGAGCATAGCTTGGGCAGTATATaGCAGTCCTGTCTTGAAAGTGGAAATTTCTTGTTATTTGTGCTT +
Preference number: 1 (lower is better)
Translates to: LFLFLRLFEHSLGSI*QSCLESGNFLLFVL
Trigger: AAGCACAAATAACAAGAAATTTCCACTTTCAAGACAGGACTGGCATATACTGCCCAAGCTATGCTCAAACAGTCTTAAGAACAGAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR CCA 90 bp CATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATaGATGCTTGGTTGCTTCCACATTTTGACTGTTGAACATAGATAC +
Preference number: 1 (lower is better)
Translates to: HCIDIPSFAYAFVCR*MLGCFHILTVEHRY
Trigger: GTATCTATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR-3UTR CCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTCTTCTGGCTGTGGCTaGAGATGGCTCACCAGAGGG +
Preference number: 2 (lower is better)
Translates to: VAGVSAAGTIQTPTASLASSGCG*RWLTRG
Trigger: CCCTCTGGTGAGCCATCTCCAGCCACAGCCAGAAGA...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
3UTR-3UTR CCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTCTTCTGGCTGTGGCTaGAGATGGCTCACCAGAGGG +
Preference number: 2 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVSSGCG*RWLTRG
Trigger: CCCTCTGGTGAGCCATCTCCAGCCACAGCCAGAAGA...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
3UTR CAA 90 bp GGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTaGGGGACAGACATGCTGTGTTTCTTCTGGCTGTGGCTGGAGATG +
Preference number: 2 (lower is better)
Translates to: GQCCRDHTDSNRKSG*GTDMLCFFWLWLEM
Trigger: CATCTCCAGCCACAGCCAGAAGAAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
3UTR-3UTR TCA 90 bp GAGGCAGAGGGTACTTCATGGCACGAATGGTTCCCACCGAGGTGCCCACAAACAAACCAGAGTTTCCTCTaGGGGGCTGAAGCACAGGCA +
Preference number: 2 (lower is better)
Translates to: EAEGTSWHEWFPPRCPQTNQSFL*GAEAQA
Trigger: TGCCTGTGCTTCAGCCCCTCAGAGGAAACTCTGGTT...TGTTTGTGGGCACCTCGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGTGTTTCTTCTGGCTGTaGCTGGAGATGGCTCACCAG +
Preference number: 2 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLCFFWL*LEMAHQ
Trigger: CTGGTGAGCCATCTCCAGCCACAGCCAGAAGAAACA...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
3UTR CAA 90 bp CAAACAGCAGAACTCTCCCTGGCCCAGCAGAACAGGCAAATCCCTTaGAATAGGCTGCAATGGCAAACACCTGGGGCATGGACATCTGGC +
Preference number: 2 (lower is better)
Translates to: QTAELSLAQQNRQIP*NRLQWQTPGAWTSG
Trigger: GCCAGATGTCCATGCCCCAGGTGTTTGCCATTGCAGCCTATTCAAAGGGATTTGCCTGTTCTGCTGGGCCAGGGAGAGTTCTGCTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CAA 90 bp CAAAGGCGGATGGATCGATCCAGAGAACAGGTGGCTATAAGGGGTTaGCGGATGCAGGTAGCTAGACCGGTGATGGGTGCTGAGTGCAAT +
Preference number: 2 (lower is better)
Translates to: QRRMDRSREQVAIRG*RMQVARPVMGAECN
Trigger: ATTGCACTCAGCACCCATCACCGGTCTAGCTACCTGCATCCGCAAACCCCTTATAGCCACCTGTTCTCTGGATCGATCCATCCGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR TCA 90 bp ACATCTGGCTATGGCTACTGGCCGCCACCATCTGTTCATAGGAAGGGAGTGGAGGACATCCAGGCTCTTTaGGCCATTGGTAGGTTCCTT +
Preference number: 2 (lower is better)
Translates to: TSGYGYWPPPSVHRKGVEDIQAL*AIGRFL
Trigger: AAGGAACCTACCAATGGCTCAAAGAGCCTGGATGTC...CTCCACTCCCTTCCTATGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR TCA 90 bp AACACCTGGGGCATGGACATCTGGCTATGGCTACTGGCCGCCACCATCTGTTCATCTCTGATTCCTGAATaGCATCCAGGCTCTTTGAGC +
Preference number: 2 (lower is better)
Translates to: NTWGMDIWLWLLAATICSSLIPE*HPGSLS
Trigger: GCTCAAAGAGCCTGGATGTCATTCAGGAATCAGAGA...TGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGATGTCCATGCCCCAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CCA 90 bp GAGAACGTCCTGTTTGTCAGACTGACTTGGATCATTGCTCTGCGGGTCCACAGGCTCCCCTCTGAAAGCTaGTTTGCTTCAGGGTTCCCT +
Preference number: 2 (lower is better)
Translates to: ENVLFVRLTWIIALRVHRLPSES*FASGFP
Trigger: AGGGAACCCTGAAGCAAACCAGCTTTCAGAGGGGAG...CCTGTGGACCCGCAGAGCAATGATCCAAGTCAGTCTGACAAACAGGACGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CCA 90 bp CGGATGCAGGTAGCTAGACCGGTGATGGGTGCTGAGTGCAATGGATACATCAAACAGCAGAACTCTCCCTaGCCCAGCAGAACAGGCAAA +
Preference number: 2 (lower is better)
Translates to: RMQVARPVMGAECNGYIKQQNSP*PSRTGK
Trigger: TTTGCCTGTTCTGCTGGGCCAGGGAGAGTTCTGCTG...TTTGATGTATCCATTGCACTCAGCACCCATCACCGGTCTAGCTACCTGCATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR TCA 90 bp TGTCAGGGACATGGTGATGCTGTAGAGTTGGTTCTTACTGGTGCTGGCAACCAGCTGGTCTCCCAACGCTaGTCTCCAGATTCAAAGAGG +
Preference number: 2 (lower is better)
Translates to: CQGHGDAVELVLTGAGNQLVSQR*SPDSKR
Trigger: CCTCTTTGAATCTGGAGATCAGCGTTGGGAGACCAG...CTGGTTGCCAGCACCAGTAAGAACCAACTCTACAGCATCACCATGTCCCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR GCA 90 bp GAGGCAGAGGGTACTTCATGGCACGAATGGTTCCCACCGAGGTGCCCACAAACAAAGGATCAAGGAATCTaGAATCTCCTTGAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: EAEGTSWHEWFPPRCPQTKDQGI*NLLEGV
Trigger: CACACCCTCAAGGAGATTGCAGATTCCTTGATCCTT...TGTTTGTGGGCACCTCGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR TCA 90 bp CGGATGCAGGTAGCTAGACCGGTGATGGGTGCTGAGTGCAATGGATACATCAAATCTGGAGGTGACGTCTaGGCCAATAGGTATTTGGAG +
Preference number: 2 (lower is better)
Translates to: RMQVARPVMGAECNGYIKSGGDV*ANRYLE
Trigger: CTCCAAATACCTATTGGCTCAGACGTCACCTCCAGA...TTTGATGTATCCATTGCACTCAGCACCCATCACCGGTCTAGCTACCTGCATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR GCA 90 bp GAGCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTTGAGCTGCAGCTCCTGTGCAGTTCCCGGCTTTaGTTGTCTAGGAGGTCTTCT +
Preference number: 2 (lower is better)
Translates to: ELFFILFLHPLGLELQLLCSSRL*LSRRSS
Trigger: AGAAGACCTCCTAGACAAGCAAAGCCGGGAACTGCA...CAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR-3UTR GCA 90 bp TTCCAAAGGCGGATGGATCGATCCAGAGAACAGGTGGCTATAAGGGGTTTGCGGCAAAGAGGAAGAGTTTaGCTGTGTCAGTGCCAACGA +
Preference number: 2 (lower is better)
Translates to: FQRRMDRSREQVAIRGLRQRGRV*LCQCQR
Trigger: TCGTTGGCACTGACACAGGCAAACTCTTCCTCTTTG...CCGCAAACCCCTTATAGCCACCTGTTCTCTGGATCGATCCATCCGCCTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CCA 90 bp TGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTGTCTGGGGCATTCTCTaGAGGAGGAGGCAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: CLCIRLSMDAWLLPHFDCVWGIL*RRRQLW
Trigger: CCACAGCTGCCTCCTCCTCCAGAGAATGCCCCAGAC...ACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR-3UTR TCA 90 bp TTCCAAAGGCGGATGGATCGATCCAGAGAACAGGTGGCTATAAGGGGTTTGCGGACAGGCAAATCCCTTTaGATAGGCTGCAATGGCAAA +
Preference number: 2 (lower is better)
Translates to: FQRRMDRSREQVAIRGLRTGKSL*IGCNGK
Trigger: TTTGCCATTGCAGCCTATTCAAAGGGATTTGCCTGT...CCGCAAACCCCTTATAGCCACCTGTTCTCTGGATCGATCCATCCGCCTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR TCA 90 bp CGAGGTGCCCACAAACATCATGCGTCCAGAATGCGAGATGACAATGGCGGTGTACAGATGGATGAAGGCTaGTGGAATATGCCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: RGAHKHHASRMRDDNGGVQMDEG*WNMPLL
Trigger: AAGAAGAGGCATATTCCATCAGCCTTCATCCATCTG...TACACCGCCATTGTCATCTCGCATTCTGGACGCATGATGTTTGTGGGCACCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CCA 90 bp TTCCAAAGGCGGATGGATCGATCCAGAGAACAGGTGGCTATAAGGGGTTTGCGGGCTTCCGGCAAGGGATaGATGACAATTCATAAATGG +
Preference number: 2 (lower is better)
Translates to: FQRRMDRSREQVAIRGLRASGKG*MTIHKW
Trigger: CCATTTATGAATTGTCATCCATCCCTTGCCGGAAGC...CCGCAAACCCCTTATAGCCACCTGTTCTCTGGATCGATCCATCCGCCTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR TCA 90 bp ACCTCCATTGCTAAAGGAACACTCTCCGCATCCTCTAACAGAGTATTCTTTGAAACCGCCGATTGGGACTaGTGGACAAGGCCAACATGC +
Preference number: 2 (lower is better)
Translates to: TSIAKGTLSASSNRVFFETADWD*WTRPTC
Trigger: GCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGT...TTCAAAGAATACTCTGTTAGAGGATGCGGAGAGTGTTCCTTTAGCAATGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR TCA 90 bp GGCACGAATGGTTCCCACCGAGGTGCCCACAAACATCATGCGTCCAGAATGCGAACAATTCATAAATGGTaGTGGCAGGTTTTTCTTGCA +
Preference number: 2 (lower is better)
Translates to: GTNGSHRGAHKHHASRMRTIHKW*WQVFLA
Trigger: TGCAAGAAAAACCTGCCATCACCATTTATGAATTGT...TCGCATTCTGGACGCATGATGTTTGTGGGCACCTCGGTGGGAACCATTCGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR TCA 90 bp GCAATCTCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGCCAGTGACACACACCTaGGTGTTATCCTGTGGACTG +
Preference number: 2 (lower is better)
Translates to: AISLRVWSDPTAKIILASPVTHT*VLSCGL
Trigger: CAGTCCACAGGATAACACTCAGGTGTGTGTCACTGG...CGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR GCA 90 bp TCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGGGGGAGGTTGGTTCTTACTGGTaGTGGCAACCAGAGTTTCCT +
Preference number: 2 (lower is better)
Translates to: SLRVWSDPTAKIILASGEVGSYW*WQPEFP
Trigger: AGGAAACTCTGGTTGCCAGCACCAGTAAGAACCAAC...CTCCCCCGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR TCA 90 bp CCGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTTGAGCTGCAGCTCATGCCAGTCCTGTCTTaGAAGTGGAAATTTCTTGTT +
Preference number: 2 (lower is better)
Translates to: PELFFILFLHPLGLELQLMPVLS*KWKFLV
Trigger: AACAAGAAATTTCCACTTTCAAGACAGGACTGGCAT...GAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR-3UTR GCA 90 bp GAGCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTTGAGCTGCAGCTCCTGGCAACTTTTGGTTGTTaGAACATTCCATGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: ELFFILFLHPLGLELQLLATFGC*NIPCPA
Trigger: TGCAGGACATGGAATGTTGCAACAACCAAAAGTTGC...CAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR-3UTR CCA 90 bp GCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTTGAACATTCATGGTATTGCCCCTaGGGTGGCCTTTTGTACCCT +
Preference number: 2 (lower is better)
Translates to: AFVCRWMLGCFHILTVEHSWYCP*GGLLYP
Trigger: AGGGTACAAAAGGCCACCCCAGGGGCAATACCATGA...ATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR-3UTR CCA 90 bp TTCATGAGGCGTAGTTTGTCAGCAAACCCTACTACAATGAAGTGTCCAGATGGATCTGGCTATGGCTACTaGCCGCCACCATCTGTTCAT +
Preference number: 2 (lower is better)
Translates to: FMRRSLSANPTTMKCPDGSGYGY*PPPSVH
Trigger: ATGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGA...TCCATCTGGACACTTCATTGTAGTAGGGTTTGCTGACAAACTACGCCTCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CCA 90 bp TCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGGGGGAGTCTCTAGGCTCGTGGTaGTGTAAACGTGAATCACAT +
Preference number: 2 (lower is better)
Translates to: SLRVWSDPTAKIILASGESLGSW*CKRESH
Trigger: ATGTGATTCACGTTTACACCACCACGAGCCTAGAGA...CTCCCCCGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CCA 90 bp CTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATTGTTTGAGCATAGCTTaGGCAGTATATGCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: LALGLIVIPELFFILFLHCLSIA*AVYASP
Trigger: AGGACTGGCATATACTGCCCAAGCTATGCTCAAACA...ATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR CAA 90 bp TTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTaGAGCTGCAGCTCCTGGTACTTCTCATATTCTAGAAGCAACTTT +
Preference number: 2 (lower is better)
Translates to: LSRSCFSYSSCILWD*SCSSWYFSYSRSNF
Trigger: AAAGTTGCTTCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR CAA 90 bp CAATGGCCATTACTTTCTGTTTTTCCCACAGCCAGTAGACAAGATTaGACTCTGGAGGTGACGTCTGAGCCAATAGGTATTTGGAGTCTG +
Preference number: 2 (lower is better)
Translates to: QWPLLSVFPTASRQD*TLEVTSEPIGIWSL
Trigger: CAGACTCCAAATACCTATTGGCTCAGACGTCACCTCCAGAGTCAAATCTTGTCTACTGGCTGTGGGAAAAACAGAAAGTAATGGCCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CAA 90 bp TCAAACGCCGATATCTCTCGAAGGATCAAGGAATCTGCAATCTCCTaGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCG +
Preference number: 2 (lower is better)
Translates to: SNADISRRIKESAIS*RVWSDPTAKIILAS
Trigger: CGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGAGATTGCAGATTCCTTGATCCTTCGAGAGATATCGGCGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CCA 90 bp TTCATACACAGCACCATCTGTGCCACCAGAAATCAGTTTGCTATCATCTGCATTGGTTCTTACTGGTGCTaGCAACCAGAGTTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: FIHSTICATRNQFAIICIGSYWC*QPEFPL
Trigger: CAGAGGAAACTCTGGTTGCCAGCACCAGTAAGAACC...AATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CAA 90 bp AGATTCCATTCATACACAGCACCATCTGTGCCACCAGAAATCAGTTaGCTATCATCTGCATTCCACACAATTGAGCGAATCTTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: RFHSYTAPSVPPEIS*LSSAFHTIERIFPV
Trigger: CACAGGGAAGATTCGCTCAATTGTGTGGAATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGTATGAATGGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CCA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTGGCTCCTTTCAGTCTaGGGCATTCTCTGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYWLLSV*GILWRR
Trigger: CCTCCTCCAGAGAATGCCCCAGACTGAAAGGAGCCA...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR-3UTR CCA 90 bp CCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCTTTTGCACAAATGTGTACTCATaGTATTGCCCCTGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: PFLFRQGIVPLYRYTIFCTNVYS*YCPWGG
Trigger: GCCACCCCAGGGGCAATACCATGAGTACACATTTGT...GCAAAAGATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR-3UTR CCA 90 bp ACCTCCATTGCTAAAGGAACACTCTCCGCATCCTCTAACAGAGTATTCTTTGAAAGAGTTGGTTCTTACTaGTGCTGGCAACCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: TSIAKGTLSASSNRVFFERVGSY*CWQPEF
Trigger: AAACTCTGGTTGCCAGCACCAGTAAGAACCAACTCT...TTCAAAGAATACTCTGTTAGAGGATGCGGAGAGTGTTCCTTTAGCAATGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CCA 90 bp TTCATACACAGCACCATCTGTGCCACCAGAAATCAGTTTGCTATCATCTGCATTTGTTCTCTAGGCTCGTaGTGGTGTAAACGTGAATCA +
Preference number: 2 (lower is better)
Translates to: FIHSTICATRNQFAIICICSLGS*WCKRES
Trigger: TGATTCACGTTTACACCACCACGAGCCTAGAGAACA...AATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGTATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CCA 90 bp TTGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGAAGGACAATTCAATCTTCAGGGCTATaGCTCCTTTCAGTCTGGGGC +
Preference number: 2 (lower is better)
Translates to: LTVEHRYYFMRRVNGRTIQSSGL*LLSVWG
Trigger: GCCCCAGACTGAAAGGAGCCATAGCCCTGAAGATTG...AATTGTCCTTCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CAA 90 bp GCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTaGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGA +
Preference number: 2 (lower is better)
Translates to: AYAFVCRWMLGCFHI*TVEHRYYFMRRVNG
Trigger: TCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR-3UTR GCA 90 bp TGGTACTTCTCATATTCTAGAAGCAACTTTTGGTTGTTGCAACATTCCATGTCCAGCTTGGGCAGTATATaGCAGTCCTGTCTTGAAAGT +
Preference number: 2 (lower is better)
Translates to: WYFSYSRSNFWLLQHSMSSLGSI*QSCLES
Trigger: ACTTTCAAGACAGGACTGGCATATACTGCCCAAGCT...GGACATGGAATGTTGCAACAACCAAAAGTTGCTTCTAGAATATGAGAAGTACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR CAA 90 bp CCATTGCTAAAGGAACACTCTCCGCATCCTCTAACAGAGTATTCTTaGAAAGAACGTATATCATCAATGAGTAGATTCATGAGGCGTAGT +
Preference number: 2 (lower is better)
Translates to: PLLKEHSPHPLTEYS*KERISSMSRFMRRS
Trigger: ACTACGCCTCATGAATCTACTCATTGATGATATACGTTCTTTCAAAGAATACTCTGTTAGAGGATGCGGAGAGTGTTCCTTTAGCAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CCA 72 bp TCAGGGCTATGGCTCCTTTCAGTCTGGGGCATTCTCTaGAGGAGGAGGCAGCTGTGGTCAAGTGCAGCCCAC +
Preference number: 3 (lower is better)
Translates to: SGLWLLSVWGIL*RRRQLWSSAAH
Trigger: GTGGGCTGCACTTGACCACAGCTGCCTCCTCCTCCAGAGAATGCCCCAGACTGAAAGGAGCCATAGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CCA 72 bp CCCTCAGGGAGAGGTAGGGGCCAATCTTCAGGGCTATaGCTCCTTTCAGTCTGGGGCATTCTCTGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: PSGRGRGQSSGL*LLSVWGILWRR
Trigger: CCTCCTCCAGAGAATGCCCCAGACTGAAAGGAGCCATAGCCCTGAAGATTGGCCCCTACCTCTCCCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CCA 72 bp AGGGGCCAATCTTCAGGGCTATGGCTCCTTTCAGTCTaGGGCATTCTCTGGAGGAGGAGGCAGCTGTGGTCA +
Preference number: 3 (lower is better)
Translates to: RGQSSGLWLLSV*GILWRRRQLWS
Trigger: TGACCACAGCTGCCTCCTCCTCCAGAGAATGCCCCAGACTGAAAGGAGCCATAGCCCTGAAGATTGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR GCA 72 bp CAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATaGTGTGTTTCTTCTGGCTGTGGCTGGAGATGGCTC +
Preference number: 3 (lower is better)
Translates to: QTPTASLAWGQT*CVSSGCGWRWL
Trigger: GAGCCATCTCCAGCCACAGCCAGAAGAAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
3UTR CCA 72 bp GCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTaGGGACAGACATGCTGTGTTTCTTCTGGCTGTGGC +
Preference number: 3 (lower is better)
Translates to: AGTIQTPTASLA*GQTCCVSSGCG
Trigger: GCCACAGCCAGAAGAAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
3UTR CCA 72 bp CAAACACCTGGGGCATGGACATCTGGCTATGGCTACTaGCCGCCACCATCTGTTCATAGGAAGGGAGTGGAG +
Preference number: 3 (lower is better)
Translates to: QTPGAWTSGYGY*PPPSVHRKGVE
Trigger: CTCCACTCCCTTCCTATGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGATGTCCATGCCCCAGGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CAA 90 bp TTCCAAAGGCGGATGGATCGATCCAGAGAACAGGTGGCTATAAGGGGTTTGCGGCCTCTGAAAGCTGGTTaGCTTCAGGGTTCCCTCAGC +
Preference number: 3 (lower is better)
Translates to: FQRRMDRSREQVAIRGLRPLKAG*LQGSLS
Trigger: GCTGAGGGAACCCTGAAGCAAACCAGCTTTCAGAGG...CCGCAAACCCCTTATAGCCACCTGTTCTCTGGATCGATCCATCCGCCTTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CAA 90 bp AACACCTGGGGCATGGACATCTGGCTATGGCTACTGGCCGCCACCATCTGTTCAAGGCTCTTTGAGCCATaGGTAGGTTCCTTGACCATT +
Preference number: 3 (lower is better)
Translates to: NTWGMDIWLWLLAATICSRLFEP*VGSLTI
Trigger: AATGGTCAAGGAACCTACCAATGGCTCAAAGAGCCT...TGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGATGTCCATGCCCCAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR TCA 72 bp CTGAAGCACAGGCAGAGAACGTCCTGTTTGTCAGACTaGCTTGGATCATTGCTCTGCGGGTCCACAGGAATC +
Preference number: 3 (lower is better)
Translates to: LKHRQRTSCLSD*LGSLLCGSTGI
Trigger: GATTCCTGTGGACCCGCAGAGCAATGATCCAAGTCAGTCTGACAAACAGGACGTTCTCTGCCTGTGCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CCA 72 bp GCTACTGGCCGCCACCATCTGTTCATAGGAAGGGAGTaGAGAACTGACTGGTGGAAATTCAATCAGGCTCTC +
Preference number: 3 (lower is better)
Translates to: ATGRHHLFIGRE*RTDWWKFNQAL
Trigger: GAGAGCCTGATTGAATTTCCACCAGTCAGTTCTCCACTCCCTTCCTATGAACAGATGGTGGCGGCCAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CCA 72 bp CAGCAGAACAGGCAAATCCCTTTGAATAGGCTGCAATaGCAAACACCTGGGGCATGGACATCTGGCTATGGC +
Preference number: 3 (lower is better)
Translates to: QQNRQIPLNRLQ*QTPGAWTSGYG
Trigger: GCCATAGCCAGATGTCCATGCCCCAGGTGTTTGCCATTGCAGCCTATTCAAAGGGATTTGCCTGTTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CCA 72 bp GCACAGGCAGAGAACGTCCTGTTTGTCAGACTGACTTaGATCATTGCTCTGCGGGTCCACAGGAATCCTGAT +
Preference number: 3 (lower is better)
Translates to: AQAENVLFVRLT*IIALRVHRNPD
Trigger: ATCAGGATTCCTGTGGACCCGCAGAGCAATGATCCAAGTCAGTCTGACAAACAGGACGTTCTCTGCCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CAA 90 bp CGAGGTGCCCACAAACATCATGCGTCCAGAATGCGAGATGACAATGGCGGTGTAGTTTGTCAGACTGACTaGGATCATTGCTCTGCGGGT +
Preference number: 3 (lower is better)
Translates to: RGAHKHHASRMRDDNGGVVCQTD*DHCSAG
Trigger: ACCCGCAGAGCAATGATCCAAGTCAGTCTGACAAAC...TACACCGCCATTGTCATCTCGCATTCTGGACGCATGATGTTTGTGGGCACCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CAA 90 bp TGTCAGGGACATGGTGATGCTGTAGAGTTGGTTCTTACTGGTGCTGGCAACCAGCCATTGGTAGGTTCCTaGACCATTATGCTGGTCTCC +
Preference number: 3 (lower is better)
Translates to: CQGHGDAVELVLTGAGNQPLVGS*TIMLVS
Trigger: GGAGACCAGCATAATGGTCAAGGAACCTACCAATGG...CTGGTTGCCAGCACCAGTAAGAACCAACTCTACAGCATCACCATGTCCCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR TCA 72 bp GGTGCTGAGTGCAATGGATACATCAAATACTCAAAGTaGGCAGGCTCCCCCTTGCTGATCTCTGTCAGGGAC +
Preference number: 3 (lower is better)
Translates to: GAECNGYIKYSK*AGSPLLISVRD
Trigger: GTCCCTGACAGAGATCAGCAAGGGGGAGCCTGCTCACTTTGAGTATTTGATGTATCCATTGCACTCAGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR GCA 72 bp AAACAATCATTCCTCATTCCCCCTTCCTGCAGCCCCTaGCAACCACCACTCTGTCTTTGTGATTCTGACTGC +
Preference number: 3 (lower is better)
Translates to: KQSFLIPPSCSP*QPPLCLCDSDC
Trigger: GCAGTCAGAATCACAAAGACAGAGTGGTGGTTGGCAGGGGCTGCAGGAAGGGGGAATGAGGAATGATTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CCA 72 bp GGACAATTTACAAATGTGTACTCATGGTATTGCCCCTaGGGTGGCCTTTTGTACCCTCAGGGAGAGGTAGGG +
Preference number: 3 (lower is better)
Translates to: GQFTNVYSWYCP*GGLLYPQGEVG
Trigger: CCCTACCTCTCCCTGAGGGTACAAAAGGCCACCCCAGGGGCAATACCATGAGTACACATTTGTAAATTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CCA 72 bp CCCATTTCCAGTGACACACACCTGAGTGTTATCCTGTaGACTGAAGCTCACCTGGTAGACAGGGTTGTTCTG +
Preference number: 3 (lower is better)
Translates to: PISSDTHLSVIL*TEAHLVDRVVL
Trigger: CAGAACAACCCTGTCTACCAGGTGAGCTTCAGTCCACAGGATAACACTCAGGTGTGTGTCACTGGAAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CAA 90 bp TCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGGGGGAGGCCAGTAGACAAGATTaGACTCTGGAGGTGACGTCT +
Preference number: 3 (lower is better)
Translates to: SLRVWSDPTAKIILASGEASRQD*TLEVTS
Trigger: AGACGTCACCTCCAGAGTCAAATCTTGTCTACTGGC...CTCCCCCGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CAA 90 bp CGAGGTGCCCACAAACATCATGCGTCCAGAATGCGAGATGACAATGGCGGTGTACCACCAGAAATCAGTTaGCTATCATCTGCATTCCAC +
Preference number: 3 (lower is better)
Translates to: RGAHKHHASRMRDDNGGVPPEIS*LSSAFH
Trigger: GTGGAATGCAGATGATAGCAAACTGATTTCTGGTGG...TACACCGCCATTGTCATCTCGCATTCTGGACGCATGATGTTTGTGGGCACCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR GCA 72 bp CTCCAGATTCAAAGAGGAAGAGTTTGCCTGTGTCAGTaGCAACGACAATCTTGTCATCAGCCACCCAGGTGT +
Preference number: 3 (lower is better)
Translates to: LQIQRGRVCLCQ*QRQSCHQPPRC
Trigger: ACACCTGGGTGGCTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTCCTCTTTGAATCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CCA 72 bp TCCCGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTaGGACTTGAGCTGCAGCTCCTGGTACTTCTCATAT +
Preference number: 3 (lower is better)
Translates to: SRSCFSYSSCIL*DLSCSSWYFSY
Trigger: ATATGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTCCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR CCA 72 bp TTTCCTAGGCTAAATTCCTTGGTGATAGGACCGGCATaGGCCTGGTACTCATTGAATTCCTTCTGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: FPRLNSLVIGPA*AWYSLNSFCRG
Trigger: GCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCCATGCCGGTCCTATCACCAAGGAATTTAGCCTAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CAA 90 bp CTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATCTGTTTGAGCATAGCTaGGGCAGTATATGCCAGTCC +
Preference number: 3 (lower is better)
Translates to: LALGLIVIPELFFILFLHLFEHS*GSICQS
Trigger: GGACTGGCATATACTGCCCAAGCTATGCTCAAACAG...ATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR-3UTR CAA 90 bp TCCTCCAGGGCCTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACAGAAGCAACTTTTGGTaGTTGCAACATTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: SSRAWLLVSSLSRSCFSYRSNFW*LQHSMS
Trigger: GGACATGGAATGTTGCAACAACCAAAAGTTGCTTCT...GTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAGGCCCTGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR TCA 72 bp GTAGGTTCCTTGACCATTATGCTGGTCTCCCAACGCTaGTCTCCAGATTCAAAGAGGAAGAGTTTGCCTGTG +
Preference number: 3 (lower is better)
Translates to: VGSLTIMLVSQR*SPDSKRKSLPV
Trigger: CACAGGCAAACTCTTCCTCTTTGAATCTGGAGATCAGCGTTGGGAGACCAGCATAATGGTCAAGGAACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR GCA 72 bp ATACCTATGAAACAATCATTCCTCATTCCCCCTTCCTaGAGCCCCTGCCAACCACCACTCTGTCTTTGTGAT +
Preference number: 3 (lower is better)
Translates to: IPMKQSFLIPPS*SPCQPPLCLCD
Trigger: ATCACAAAGACAGAGTGGTGGTTGGCAGGGGCTGCAGGAAGGGGGAATGAGGAATGATTGTTTCATAGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR GCA 72 bp CCCAACGCTGATCTCCAGATTCAAAGAGGAAGAGTTTaGCTGTGTCAGTGCCAACGACAATCTTGTCATCAG +
Preference number: 3 (lower is better)
Translates to: PNADLQIQRGRV*LCQCQRQSCHQ
Trigger: CTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTCCTCTTTGAATCTGGAGATCAGCGTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CAA 90 bp TCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTAGTTCCCGGCTTTGCTaGTCTAGGAGGTCTTCTATG +
Preference number: 3 (lower is better)
Translates to: SWSHRYPGAVFHTLPASSSSRLC*SRRSSM
Trigger: CATAGAAGACCTCCTAGACAAGCAAAGCCGGGAACT...AGAGGATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR TCA 72 bp GATCAAGGAATCTGCAATCTCCTTGAGGGTGTGGTCTaGTCCAACAGCAAAGATAATTTTGGCATCGGGGGA +
Preference number: 3 (lower is better)
Translates to: DQGICNLLEGVV*SNSKDNFGIGG
Trigger: TCCCCCGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGAGATTGCAGATTCCTTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CCA 72 bp TCTTCCTGCATCCTCTGGGACTTGAGCTGCAGCTCCTaGTACTTCTCATATTCTAGAAGCAACTTTTGGTTG +
Preference number: 3 (lower is better)
Translates to: SSCILWDLSCSS*YFSYSRSNFWL
Trigger: CAACCAAAAGTTGCTTCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR-3UTR CAA 90 bp TTCATACACAGCACCATCTGTGCCACCAGAAATCAGTTTGCTATCATCTGCATTTGTGTCCTTTCAGGCTaGAGATGTTCTCTAGGCTCG +
Preference number: 3 (lower is better)
Translates to: FIHSTICATRNQFAIICICVLSG*RCSLGS
Trigger: CGAGCCTAGAGAACATCTCAAGCCTGAAAGGACACA...AATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR TCA 72 bp GCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTTaGGCTGCAGCTCCTGGTACTTCTCATATTCTAGAA +
Preference number: 3 (lower is better)
Translates to: AVFHTLPASSGT*AAAPGTSHILE
Trigger: TTCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR GCA 72 bp TTTTCATACTCTTCCTGCATCCTCTGGGACTTGAGCTaGAGCTCCTGGTACTTCTCATATTCTAGAAGCAAC +
Preference number: 3 (lower is better)
Translates to: FSYSSCILWDLS*SSWYFSYSRSN
Trigger: GTTGCTTCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR GCA 72 bp CTGTGGACAGATTCCATTCATACACAGCACCATCTGTaGCACCAGAAATCAGTTTGCTATCATCTGCATTCC +
Preference number: 3 (lower is better)
Translates to: LWTDSIHTQHHL*HQKSVCYHLHS
Trigger: GGAATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGTATGAATGGAATCTGTCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CCA 72 bp CGAAGGATCAAGGAATCTGCAATCTCCTTGAGGGTGTaGTCTGATCCAACAGCAAAGATAATTTTGGCATCG +
Preference number: 3 (lower is better)
Translates to: RRIKESAISLRV*SDPTAKIILAS
Trigger: CGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGAGATTGCAGATTCCTTGATCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR TCA 72 bp TCAGCAAACCCTACTACAATGAAGTGTCCAGATGGATaGAGGCTGATGGAATATGCCTCTTCTTGGTATTCC +
Preference number: 3 (lower is better)
Translates to: SANPTTMKCPDG*RLMEYASSWYS
Trigger: GGAATACCAAGAAGAGGCATATTCCATCAGCCTTCATCCATCTGGACACTTCATTGTAGTAGGGTTTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR-3UTR CAA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTGTGTACTCATGGTATaGCCCCTGGGGTGGCCTTTT +
Preference number: 3 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYCVLMV*PLGWPF
Trigger: AAAAGGCCACCCCAGGGGCAATACCATGAGTACACA...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CCA 72 bp TTTGTCAGCAAACCCTACTACAATGAAGTGTCCAGATaGATGAAGGCTGATGGAATATGCCTCTTCTTGGTA +
Preference number: 3 (lower is better)
Translates to: FVSKPYYNEVSR*MKADGICLFLV
Trigger: TACCAAGAAGAGGCATATTCCATCAGCCTTCATCCATCTGGACACTTCATTGTAGTAGGGTTTGCTGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR GCA 72 bp ATAACATCCTCAAGGTTCATCCATGTGGTAGCACATTaGAGAATTCCCTTCCTTTTTAGGCAGGGTATTGTT +
Preference number: 3 (lower is better)
Translates to: ITSSRFIHVVAH*RIPFLFRQGIV
Trigger: AACAATACCCTGCCTAAAAAGGAAGGGAATTCTGCAATGTGCTACCACATGGATGAACCTTGAGGATGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR-3UTR CAA 90 bp TTCATACACAGCACCATCTGTGCCACCAGAAATCAGTTTGCTATCATCTGCATTATAGTTCCAGGGTGTTaGTTTCATAATTCCAAAGGC +
Preference number: 3 (lower is better)
Translates to: FIHSTICATRNQFAIICIIVPGC*FHNSKG
Trigger: GCCTTTGGAATTATGAAACAAACACCCTGGAACTAT...AATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR TCA 72 bp ATTATTAAGAACTTTGCGCTTCCGGCAAGGGATGGATaGCAATTCATAAATGGTGATGGCAGGTTTTTCTTG +
Preference number: 3 (lower is better)
Translates to: IIKNFALPARDG*QFINGDGRFFL
Trigger: CAAGAAAAACCTGCCATCACCATTTATGAATTGTCATCCATCCCTTGCCGGAAGCGCAAAGTTCTTAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR GCA 72 bp TTTGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTaGTTCCACATTTTGACTGTTGAACATAGATACTAC +
Preference number: 3 (lower is better)
Translates to: FAYAFVCRWMLG*FHILTVEHRYY
Trigger: GTAGTATCTATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR GCA 72 bp CAGGGTATTGTTCCATTGTATAGATATACCATCTTTTaGTTATGCATTCGTCTGTCGATGGATGCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: QGIVPLYRYTIF*LCIRLSMDAWL
Trigger: CAACCAAGCATCCATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAATACCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CCA 72 bp GATATACCATCTTTTGCTTATGCATTCGTCTGTCGATaGATGCTTGGTTGCTTCCACATTTTGACTGTTGAA +
Preference number: 3 (lower is better)
Translates to: DIPSFAYAFVCR*MLGCFHILTVE
Trigger: TTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCAAAAGATGGTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR GCA 72 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATaGATTCGTCTGTCGATGGATGCTTGGTTGCTTCCA +
Preference number: 3 (lower is better)
Translates to: IVPLYRYTIFCL*IRLSMDAWLLP
Trigger: TGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGCCCGCAGCTGCTGCCTaGCGTCTTCCTGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGPAAAA*RLPVPL
Trigger: AAGAGGCACAGGAAGACGTCAGGCAGCAGCTGCGGG...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGTCCAGGTGCTCCCGCTaGCGGGTGTACTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLSRCSR*RVYSCC
Trigger: GCAGCAGGAGTACACCCGGCAGCGGGAGCACCTGGA...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAGGTTCCTCTCCAGGTaGTCCCGCTGCCGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGRFLSR*SRCRVY
Trigger: GTACACCCGGCAGCGGGAGCACCTGGAGAGGAACCT...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAGGCTGTGGCTGGAGATaGCTCACCAGAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGGCGWR*LTRGGQ
Trigger: CTGACCCCCTCTGGTGAGCCATCTCCAGCCACAGCC...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACCCCGCAGCTGCTGCCTaGCGTCTTCCTGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDPAAAA*RLPVPL
Trigger: AAGAGGCACAGGAAGACGTCAGGCAGCAGCTGCGGG...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGAGGTTCCTCTCCAGGTaGTCCCGCTGCCGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLRFLSR*SRCRVY
Trigger: GTACACCCGGCAGCGGGAGCACCTGGAGAGGAACCT...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCGGCTGTGGCTGGAGATaGCTCACCAGAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCGCGWR*LTRGGQ
Trigger: CTGACCCCCTCTGGTGAGCCATCTCCAGCCACAGCC...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACCGCCGATTGGGACTaGTGGACAAGGCCAACATGC +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGTADWD*WTRPTC
Trigger: GCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGT...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGCAGGCTCCCCCTTGCTaGTCTCTGTCAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLQAPPC*SLSGTW
Trigger: CCATGTCCCTGACAGAGATCAGCAAGGGGGAGCCTG...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTCAGGCTCCCCCTTGCTaGTCTCTGTCAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAQAPPC*SLSGTW
Trigger: CCATGTCCCTGACAGAGATCAGCAAGGGGGAGCCTG...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACCCTCCCTCTCTCGCTTaGTTCCCCGGCCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDPPSLA*FPGHPY
Trigger: ATAAGGATGGCCGGGGAATCAAGCGAGAGAGGGAGG...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAGGGTGTGGAACCCTGTaGCCTGCTCTTGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGGCGTL*PALALG
Trigger: TCCAAGAGCAAGAGCAGGTCACAGGGTTCCACACCC...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGATGCCGGGTGTACTCCTaGTGCAGGTCTGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGCRVYS*CRSVFS
Trigger: GCTGAACACAGACCTGCAGCAGGAGTACACCCGGCA...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGGGTTGCTGGGGTCAGTaGTGCAGGGACCATACAGAC +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGGCWGQ*CRDHTD
Trigger: GTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACC...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGCATGGACATCTaGCTATGGCTACTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAWGMDI*LWLLAA
Trigger: GGCGGCCAGTAGCCATAGCCAGATGTCCATGCCCCA...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACCCAGGGCCTGGCTCTTaGTCTCATCGTTATCCCGGA +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDPGPGS*SHRYPG
Trigger: TCCGGGATAACGATGAGACCAAGAGCCAGGCCCTGG...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCCTGAGCTACCACGGCTaGCATGATCTCCCGCCAAAC +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCLSYHG*HDLPPN
Trigger: GTTTGGCGGGAGATCATGTCAGCCGTGGTAGCTCAG...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGATGGGGTTCTCCCCTCTaGAAGCTGGTTTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGWGSPL*KLVCFR
Trigger: CCTGAAGCAAACCAGCTTTCAGAGGGGAGAACCCCA...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCATCCTCTGGGACTTaGGCTGCAGCTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLASSGT*AAAPGT
Trigger: AGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGC...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGCCTGGATCTCTCGCTTaGGGCCTTGGATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGPGSLA*GLGCPS
Trigger: AGAAGGACATCCAAGGCCTCAAGCGAGAGATCCAGG...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTAGACTTGGGACCGAGTaGACTTCAGCTCCCTGCGGA +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLARLGTE*TSAPCG
Trigger: TCCGCAGGGAGCTGAAGTTCACTCGGTCCCAAGTCT...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGATGGTTCCCACCGAGGTaGCCACAAACATCATGCGTC +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGWFPPR*PQTSCV
Trigger: GACGCATGATGTTTGTGGGCACCTCGGTGGGAACCA...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTAACTCCCGCAGCTGCTaGCTGACGTCTTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSNSRSC*LTSSCA
Trigger: GGCACAGGAAGACGTCAGGCAGCAGCTGCGGGAGTT...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTAACTCCCGCAGCTGCTaGCTGACGTCTTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHANSRSC*LTSSCA
Trigger: GGCACAGGAAGACGTCAGGCAGCAGCTGCGGGAGTT...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGCGGGTGTACTCCTGCTaGAGGTCTGTGTTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQRVYSC*RSVFSP
Trigger: AGGGCTGAACACAGACCTGCAGCAGGAGTACACCCG...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTTCCAGGTGCTCCCGCTaGCGGGTGTACTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFSRCSR*RVYSCC
Trigger: GCAGCAGGAGTACACCCGGCAGCGGGAGCACCTGGA...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTGCGGACGTAGTCTGTaGGGTGCAGCTCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCCGRSL*GAARPP
Trigger: AGGAGGGCGAGCTGCACCGCACAGACTACGTCCGCA...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGCTGGGGTCAGTGCTaGAGGGACCATACAGACTCC +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCCWGQC*RDHTDS
Trigger: GGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGGGTTGCTGGGGTCAGTaGTGCAGGGACCATACAGAC +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQGCWGQ*CRDHTD
Trigger: GTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACC...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGCAGCAGAACTCTCCCTaGCCCAGCAGAACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGQQNSP*PSRTGK
Trigger: TTTGCCTGTTCTGCTGGGCCAGGGAGAGTTCTGCTG...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACACTCCAGCGAGGGTGTaGAACCCTGTGACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDTPARV*NPVTCS
Trigger: AGAGCAGGTCACAGGGTTCCACACCCTCGCTGGAGT...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACCTACCACGGCTGACATaGTCTCCCGCCAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDLPRLT*SPAKQF
Trigger: GAACTGTTTGGCGGGAGATCATGTCAGCCGTGGTAG...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAAAAACATGCAGCGTCTaGGCTACCACGGCTGACATG +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGKTCSV*ATTADM
Trigger: CATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTT...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCAACATGCCCACCGCCGATTGGGACTaGTGGACAAGGCCAACATGC +
Preference number: 4 (lower is better)
Translates to: SEIARYRRLGLMDKANMPTADWD*WTRPTC
Trigger: GCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGT...GGGCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR TCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACCTGGTCTCCCAACGCTaGTCTCCAGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDLVSQR*SPDSKR
Trigger: CCTCTTTGAATCTGGAGATCAGCGTTGGGAGACCAG...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTCAAAGACCTTCCAGGTaGACAGGCAGCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAQRPSR*TGSHPQ
Trigger: CTGAGGATGGCTGCCTGTTCACCTGGAAGGTCTTTG...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGCATCCTCTGGGACTTaGGCTGCAGCTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHAASSGT*AAAPGT
Trigger: AGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGC...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACTGCCTGTTTCTCCCTTaGGCCGCAGGTTTGATTCCT +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDCLFLP*AAGLIP
Trigger: AGGAATCAAACCTGCGGCTCAAGGGAGAAACAGGCA...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGCCTGGATCTCTCGCTTaGGGCCTTGGATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQPGSLA*GLGCPS
Trigger: AGAAGGACATCCAAGGCCTCAAGCGAGAGATCCAGG...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAGCTGGGTTCTGTCTCTaGAACTTCTTGTGGTCGGAC +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGAGFCL*NFLWSD
Trigger: GTCCGACCACAAGAAGTTTCAGAGACAGAACCCAGC...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGGCTGGGTTCTGTCTCTaGAACTTCTTGTGGTCGGAC +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGAGFCL*NFLWSD
Trigger: GTCCGACCACAAGAAGTTTCAGAGACAGAACCCAGC...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCCTTGGATCTGGTCTCTaGGGCGCTGGATTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCLGSGL*GAGFLG
Trigger: GCCTAGAAATCCAGCGCCTCAGAGACCAGATCCAAG...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAGGGTGTGGAACCCTGTaGCCTGCTCTTGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTGCGTL*PALALG
Trigger: TCCAAGAGCAAGAGCAGGTCACAGGGTTCCACACCC...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAGTTCAGCTTCCATCTaGGGCAGGGTTCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQSSASI*GRVPQR
Trigger: TCTCTGGGGAACCCTGCCTCAGATGGAAGCTGAACT...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610710.4
CDS-3UTR GCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGCCTGACGTCTTCCTGTaGCTCTTCCAGAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLPDVFL*LFQKGG
Trigger: ACCACCCTTCTGGAAGAGGCACAGGAAGACGTCAGG...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGGATCTCCACCATGTCTaGTCGCTGCACGTACTTCTC +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGDLHHV*SLHVLL
Trigger: GAGAAGTACGTGCAGCGAGCAGACATGGTGGAGATC...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTCGGGTGTACTCCTGCTaGAGGTCTGTGTTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHARVYSC*RSVFSP
Trigger: AGGGCTGAACACAGACCTGCAGCAGGAGTACACCCG...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTGCCGGGTGTACTCCTaGTGCAGGTCTGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVCRVYS*CRSVFS
Trigger: GCTGAACACAGACCTGCAGCAGGAGTACACCCGGCA...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTTGCGGACGTAGTCTGTaGGGTGCAGCTCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFCGRSL*GAARPP
Trigger: AGGAGGGCGAGCTGCACCGCACAGACTACGTCCGCA...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGTTGCTCATTCAACCTTaGGGTGGGAGCTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGLLIQP*GGSCAE
Trigger: CTCAGCACAGCTCCCACCGCAAGGTTGAATGAGCAA...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTGCTGGGGTCAGTGCTaGAGGGACCATACAGACTCC +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHACWGQC*RDHTDS
Trigger: GGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGGCAAGAGAAAGAGGTTaGTGGGGTCAGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQARERG*WGQCCR
Trigger: CCTGCAGCACTGACCCCAGCAACCTCTTTCTCTTGC...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGCAGCAGAACTCTCCCTaGCCCAGCAGAACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLQQNSP*PSRTGK
Trigger: TTTGCCTGTTCTGCTGGGCCAGGGAGAGTTCTGCTG...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACACTTCATGGCACGAATaGTTCCCACCGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDTSWHE*FPPRCP
Trigger: TGGGCACCTCGGTGGGAACCATTCGTGCCATGAAGT...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGCAGAGGGTACTTCATaGCACGAATGGTTCCCACCG +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLAEGTS*HEWFPP
Trigger: CGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGC...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGGGACCGGCATGGGCCTaGTACTCATTGAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGGPAWA*YSLNSF
Trigger: GAAGGAATTCAATGAGTACCAGGCCCATGCCGGTCC...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACTCTTCCTGCATCCTCTaGGACTTGAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDSSCIL*DLSCSS
Trigger: GGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGA...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGTCTTCCTGCATCCTCTaGGACTTGAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLSSCIL*DLSCSS
Trigger: GGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGA...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACACCAGGGCCTGGCTCTTaGTCTCATCGTTATCCCGGA +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTPGPGS*SHRYPG
Trigger: TCCGGGATAACGATGAGACCAAGAGCCAGGCCCTGG...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACACCTGCTCTTGCTCTTaGATCTGGTCTCTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDTCSCS*IWSLRR
Trigger: GCGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGT...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTACTCCAGCGAGGGTGTaGAACCCTGTGACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHATPARV*NPVTCS
Trigger: AGAGCAGGTCACAGGGTTCCACACCCTCGCTGGAGT...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATCTTCTGGCTGTGGCTaGAGATGGCTCACCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTSSGCG*RWLTRG
Trigger: CCCTCTGGTGAGCCATCTCCAGCCACAGCCAGAAGA...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTTCTTCTGGCTGTGGCTaGAGATGGCTCACCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSSSGCG*RWLTRG
Trigger: CCCTCTGGTGAGCCATCTCCAGCCACAGCCAGAAGA...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGCTACCACGGCTGACATaGTCTCCCGCCAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVLPRLT*SPAKQF
Trigger: GAACTGTTTGGCGGGAGATCATGTCAGCCGTGGTAG...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGAAAACATGCAGCGTCTaGGCTACCACGGCTGACATG +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLKTCSV*ATTADM
Trigger: CATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTT...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACTGTTATCCTGTGGACTaGAGCTCACCTGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDCYPVD*SSPGRQ
Trigger: CTGTCTACCAGGTGAGCTTCAGTCCACAGGATAACA...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGCCAGTGACACACACCTaGGTGTTATCCTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLPVTHT*VLSCGL
Trigger: CAGTCCACAGGATAACACTCAGGTGTGTGTCACTGG...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGGGGTTCTCCCCTCTaGAAGCTGGTTTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTWGSPL*KLVCFR
Trigger: CCTGAAGCAAACCAGCTTTCAGAGGGGAGAACCCCA...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTAACCAGAGTTTCCTCTaGGGGGCTGAAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLNQSFL*GAEAQA
Trigger: TGCCTGTGCTTCAGCCCCTCAGAGGAAACTCTGGTT...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAAACCAGAGTTTCCTCTaGGGGGCTGAAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRNQSFL*GAEAQA
Trigger: TGCCTGTGCTTCAGCCCCTCAGAGGAAACTCTGGTT...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACCTGTCAGGGACATGGTaGTGCTGTAGAGTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDLSGTW*CCRVGS
Trigger: AGAACCAACTCTACAGCATCACCATGTCCCTGACAG...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CGAGGTGCCCACAAACATCATGCGTCCAGAATGCGAGATGACAATGGCGGTGTACAGGCTCCCCCTTGCTaGTCTCTGTCAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: RGAHKHHASRMRDDNGGVQAPPC*SLSGTW
Trigger: CCATGTCCCTGACAGAGATCAGCAAGGGGGAGCCTG...TACACCGCCATTGTCATCTCGCATTCTGGACGCATGATGTTTGTGGGCACCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGATGTAGCTGCAAGACTTaGGCACGCATTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGCSCKT*ARILSL
Trigger: GAGAGACAGAATGCGTGCTCAAGTCTTGCAGCTACA...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACGGGCCTGGTACTCATTaGATTCCTTCTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDGPGTH*IPSAEA
Trigger: TGCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCC...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAAAGACCTTCCAGGTaGACAGGCAGCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRQRPSR*TGSHPQ
Trigger: CTGAGGATGGCTGCCTGTTCACCTGGAAGGTCTTTG...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATCTCTGCGCATCTCCTaGTCGGTGGCTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTSLRIS*SVALSF
Trigger: GAAACTGAGAGCCACCGATCAGGAGATGCGCAGAGA...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTAGACTTGGGACCGAGTaGACTTCAGCTCCCTGCGGA +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCRLGTE*TSAPCG
Trigger: TCCGCAGGGAGCTGAAGTTCACTCGGTCCCAAGTCT...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTCTTGGATCTGGTCTCTaGGGCGCTGGATTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHALGSGL*GAGFLG
Trigger: GCCTAGAAATCCAGCGCCTCAGAGACCAGATCCAAG...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAACTGACTTGGATCATTaGTCTGCGGGTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGTDLDH*SAGPQE
Trigger: TTCCTGTGGACCCGCAGAGCAATGATCCAAGTCAGT...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTGGTTCCCACCGAGGTaGCCACAAACATCATGCGTC +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHAWFPPR*PQTSCV
Trigger: GACGCATGATGTTTGTGGGCACCTCGGTGGGAACCA...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCAACATGCCCTGGTTCCCACCGAGGTaGCCACAAACATCATGCGTC +
Preference number: 4 (lower is better)
Translates to: SEIARYRRLGLMDKANMPWFPPR*PQTSCV
Trigger: GACGCATGATGTTTGTGGGCACCTCGGTGGGAACCA...GGGCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGATGCAGTTCCCGGCTTTaGTTGTCTAGGAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGCSSRL*LSRRSS
Trigger: AGAAGACCTCCTAGACAAGCAAAGCCGGGAACTGCA...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTCTCTGGGACTTGAGCTaGAGCTCCTGGTACTTCTCA +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLALWDLS*SSWYFS
Trigger: TGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAG...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGCTCTGGGACTTGAGCTaGAGCTCCTGGTACTTCTCA +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLLWDLS*SSWYFS
Trigger: TGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAG...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACCTTGCAGCTTCATCTaGTCTCCTTTTAGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGPCSFI*SPFRVS
Trigger: CGAGACCCTAAAAGGAGAGCAGATGAAGCTGCAAGG...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACCCTTGCAGCTTCATCTaGTCTCCTTTTAGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDPCSFI*SPFRVS
Trigger: CGAGACCCTAAAAGGAGAGCAGATGAAGCTGCAAGG...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTCCTTCTGTCTCTCTCTaGGCATCTCCTGATCGGTGG +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHAPSVSL*ASPDRW
Trigger: CCACCGATCAGGAGATGCGCAGAGAGAGACAGAAGG...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACGATCTCCACCATGTCTaGTCGCTGCACGTACTTCTC +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDDLHHV*SLHVLL
Trigger: GAGAAGTACGTGCAGCGAGCAGACATGGTGGAGATC...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGTCTGTGTTCAGCCCTaGGATCTCCACCATGTCTGC +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLVCVQP*DLHHVC
Trigger: GCAGACATGGTGGAGATCGCAGGGCTGAACACAGAC...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGTTGCTCATTCAACCTTaGGGTGGGAGCTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLLLIQP*GGSCAE
Trigger: CTCAGCACAGCTCCCACCGCAAGGTTGAATGAGCAA...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGCCTGTGACCTGCTCTTaGTCTTGGATCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLPVTCS*SWIWSL
Trigger: CAGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGG...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAGCTTGGGGACAGACATaGTGTGTTTCTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGAWGQT*CVSSGC
Trigger: ACAGCCAGAAGAAACACAGCATGTCTGTCCCCAAGC...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGGCTTGGGGACAGACATaGTGTGTTTCTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGAWGQT*CVSSGC
Trigger: ACAGCCAGAAGAAACACAGCATGTCTGTCCCCAAGC...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAGCAAGAGAAAGAGGTTaGTGGGGTCAGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRARERG*WGQCCR
Trigger: CCTGCAGCACTGACCCCAGCAACCTCTTTCTCTTGC...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGCTCCCCTCTGAAAGCTaGTTTGCTTCAGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQLPSES*FASGFP
Trigger: AGGGAACCCTGAAGCAAACCAGCTTTCAGAGGGGAG...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTATGGACATCTGGCTATaGCTACTGGCCGCCACCATC +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHAMDIWL*LLAATI
Trigger: GATGGTGGCGGCCAGTAGCCATAGCCAGATGTCCAT...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTTGGGGCATGGACATCTaGCTATGGCTACTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFWGMDI*LWLLAA
Trigger: GGCGGCCAGTAGCCATAGCCAGATGTCCATGCCCCA...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGCAAACACCTGGGGCATaGACATCTGGCTATGGCTAC +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLQTPGA*TSGYGY
Trigger: GTAGCCATAGCCAGATGTCCATGCCCCAGGTGTTTG...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGCAAACACCTGGGGCATaGACATCTGGCTATGGCTAC +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLQTPGA*TSGYGY
Trigger: GTAGCCATAGCCAGATGTCCATGCCCCAGGTGTTTG...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTGCAATGGCAAACACCTaGGGCATGGACATCTGGCTA +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAAMANT*GMDIWL
Trigger: TAGCCAGATGTCCATGCCCCAGGTGTTTGCCATTGC...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCAATGGCAAACACCTaGGGCATGGACATCTGGCTA +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLAMANT*GMDIWL
Trigger: TAGCCAGATGTCCATGCCCCAGGTGTTTGCCATTGC...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCACTTCATGGCACGAATaGTTCCCACCGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: CTVSEIARYRRLGLMDKATSWHE*FPPRCP
Trigger: TGGGCACCTCGGTGGGAACCATTCGTGCCATGAAGT...GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGGCAGAGGGTACTTCATaGCACGAATGGTTCCCACCG +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVAEGTS*HEWFPP
Trigger: CGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGC...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGTCTCGCTTGAGGCCTTaGATGTCCTTCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQSRLRP*MSFSRD
Trigger: GTCTCTGGAGAAGGACATCCAAGGCCTCAAGCGAGA...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGTCTCGTCTCTTTCCTaGATCTCTCGCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLVSSLS*ISRLRP
Trigger: AGGCCTCAAGCGAGAGATCCAGGAAAGAGACGAGAC...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGCATCTCCTGATCGGTaGCTCTCAGTTTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLASPDR*LSVSAT
Trigger: TGTGGCAGAAACTGAGAGCCACCGATCAGGAGATGC...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGTGGTCTCTGAGGCGCTaGATTTCTAGGCGCTGCATT +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLWSLRR*ISRRCI
Trigger: AATGCAGCGCCTAGAAATCCAGCGCCTCAGAGACCA...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCACCGCAAGTCTGGCTTaGGGACAGACATGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCTASLA*GQTCCV
Trigger: AACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGT...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGACCGCAAGTCTGGCTTaGGGACAGACATGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLTASLA*GQTCCV
Trigger: AACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGT...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGCTCCAACCGCAAGTCTaGCTTGGGGACAGACATGCT +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVLQPQV*LGDRHA
Trigger: AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAG...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTACCGCCGATTGGGACTaGTGGACAAGGCCAACATGC +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFTADWD*WTRPTC
Trigger: GCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGT...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTCTGGAGGTGACGTCTaGGCCAATAGGTATTTGGAG +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLASGGDV*ANRYLE
Trigger: CTCCAAATACCTATTGGCTCAGACGTCACCTCCAGA...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTCCAGTGACACACACCTaGGTGTTATCCTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLPVTHT*VLSCGL
Trigger: CAGTCCACAGGATAACACTCAGGTGTGTGTCACTGG...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTCTGGTCTCCCAACGCTaGTCTCCAGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLLVSQR*SPDSKR
Trigger: CCTCTTTGAATCTGGAGATCAGCGTTGGGAGACCAG...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTGACATCCAGGCTCTTTaGGCCATTGGTAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLADIQAL*AIGRFL
Trigger: AAGGAACCTACCAATGGCTCAAAGAGCCTGGATGTC...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGGCTCTCTGATTCCTaGATGACATCCAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDRLSDS*MTSRLF
Trigger: AAAGAGCCTGGATGTCATTCAGGAATCAGAGAGCCT...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGTCCTGTTTGTCAGACTaGCTTGGATCATTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGSCLSD*LGSLLC
Trigger: GCAGAGCAATGATCCAAGTCAGTCTGACAAACAGGA...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACCTGTCAGGGACATGGTaGTGCTGTAGAGTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDLSGTW*CCRVGS
Trigger: AGAACCAACTCTACAGCATCACCATGTCCCTGACAG...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGACCGGTGATGGGTGCTaGGTGCAATGGATACATCAA +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLTGDGC*VQWIHQ
Trigger: TTGATGTATCCATTGCACTCAGCACCCATCACCGGT...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGACCGGTGATGGGTGCTaGGTGCAATGGATACATCAA +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLTGDGC*VQWIHQ
Trigger: TTGATGTATCCATTGCACTCAGCACCCATCACCGGT...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAAGTGTCCAGATGGATaGAGGCTGATGGAATATGCC +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDKCPDG*RLMEYA
Trigger: GGCATATTCCATCAGCCTTCATCCATCTGGACACTT...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACTGCATTCCACACAATTaGGCGAATCTTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDCIPHN*ANLPCV
Trigger: CACACAGGGAAGATTCGCTCAATTGTGTGGAATGCA...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGTGTAGCTGCAAGACTTaGGCACGCATTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQCSCKT*ARILSL
Trigger: GAGAGACAGAATGCGTGCTCAAGTCTTGCAGCTACA...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACCAATGGCGGTGTAGGTaGCATCAAACGCCGATATCT +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDQWRCR*HQTPIS
Trigger: AGATATCGGCGTTTGATGTCACCTACACCGCCATTG...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAGGGCCTGGTACTCATTaGATTCCTTCTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTGPGTH*IPSAEA
Trigger: TGCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCC...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTCCTCCCTCTCTCGCTTaGTTCCCCGGCCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFPPSLA*FPGHPY
Trigger: ATAAGGATGGCCGGGGAATCAAGCGAGAGAGGGAGG...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTGCCTGTTTCTCCCTTaGGCCGCAGGTTTGATTCCT +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHACLFLP*AAGLIP
Trigger: AGGAATCAAACCTGCGGCTCAAGGGAGAAACAGGCA...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGTCTGCCACAATTCTGTaGTGTTCAGCTCCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGSATIL*CSAPVE
Trigger: CTCAACTGGAGCTGAACATCACAGAATTGTGGCAGA...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTCTCTGCGCATCTCCTaGTCGGTGGCTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCSLRIS*SVALSF
Trigger: GAAACTGAGAGCCACCGATCAGGAGATGCGCAGAGA...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGAGACATTTTCCTGCATaGTGCGGACGTAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLRHFPA*CGRSLC
Trigger: GCACAGACTACGTCCGCATCATGCAGGAAAATGTCT...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTCTTGGATCATTGCTCTaGGGGTCCACAGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSLGSLL*GSTGIL
Trigger: CAGGATTCCTGTGGACCCGCAGAGCAATGATCCAAG...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTCTTGGATCATTGCTCTaGGGGTCCACAGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLLGSLL*GSTGIL
Trigger: CAGGATTCCTGTGGACCCGCAGAGCAATGATCCAAG...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACGTTGGTTCTTACTGGTaGTGGCAACCAGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDVGSYW*WQPEFP
Trigger: AGGAAACTCTGGTTGCCAGCACCAGTAAGAACCAAC...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTATCATGCGTCCAGAATaGGAGATGACAATGGCGGTG +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAIMRPE*EMTMAV
Trigger: CACCGCCATTGTCATCTCGCATTCTGGACGCATGAT...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACTGCAGTTCCCGGCTTTaGTTGTCTAGGAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDCSSRL*LSRRSS
Trigger: AGAAGACCTCCTAGACAAGCAAAGCCGGGAACTGCA...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGCAACATTCCATGTCCTaGAGTTCCCGGCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLQHSMS*SSRLCL
Trigger: CAAGCAAAGCCGGGAACTGCAGGACATGGAATGTTG...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACACCATGTCTGCTCGCTaGACGTACTTCTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDTMSAR*TYFSKR
Trigger: TCTCTTTGAGAAGTACGTGCAGCGAGCAGACATGGT...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACACCTGTGACCTGCTCTTaGTCTTGGATCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTPVTCS*SWIWSL
Trigger: CAGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGG...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTGGAACCCTGTGACCTaGTCTTGCTCTTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVWNPVT*SCSWIW
Trigger: CCAGATCCAAGAGCAAGAGCAGGTCACAGGGTTCCA...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGCTGAGTGTTATCCTGTaGACTGAAGCTCACCTGGTA +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGLSVIL*TEAHLV
Trigger: TACCAGGTGAGCTTCAGTCCACAGGATAACACTCAG...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GAGGCAGAGGGTACTTCATGGCACGAATGGTTCCCACCGAGGTGCCCACAAACACTCCCCTCTGAAAGCTaGTTTGCTTCAGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: EAEGTSWHEWFPPRCPQTLPSES*FASGFP
Trigger: AGGGAACCCTGAAGCAAACCAGCTTTCAGAGGGGAG...TGTTTGTGGGCACCTCGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTCTCCCCTCTGAAAGCTaGTTTGCTTCAGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSLPSES*FASGFP
Trigger: AGGGAACCCTGAAGCAAACCAGCTTTCAGAGGGGAG...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTCTGGCTATGGCTACTaGCCGCCACCATCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHASGYGY*PPPSVH
Trigger: ATGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGA...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGATCTGGCTATGGCTACTaGCCGCCACCATCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRSGYGY*PPPSVH
Trigger: ATGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGA...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTATGGACATCTGGCTATaGCTACTGGCCGCCACCATC +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCMDIWL*LLAATI
Trigger: GATGGTGGCGGCCAGTAGCCATAGCCAGATGTCCAT...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GAGGCAGAGGGTACTTCATGGCACGAATGGTTCCCACCGAGGTGCCCACAAACAGCAATGGCAAACACCTaGGGCATGGACATCTGGCTA +
Preference number: 4 (lower is better)
Translates to: EAEGTSWHEWFPPRCPQTAMANT*GMDIWL
Trigger: TAGCCAGATGTCCATGCCCCAGGTGTTTGCCATTGC...TGTTTGTGGGCACCTCGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp ACATCTGGCTATGGCTACTGGCCGCCACCATCTGTTCATAGGAAGGGAGTGGAGCAGCAGAACTCTCCCTaGCCCAGCAGAACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: TSGYGYWPPPSVHRKGVEQQNSP*PSRTGK
Trigger: TTTGCCTGTTCTGCTGGGCCAGGGAGAGTTCTGCTG...CTCCACTCCCTTCCTATGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGGACCGGCATGGGCCTaGTACTCATTGAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHAGPAWA*YSLNSF
Trigger: GAAGGAATTCAATGAGTACCAGGCCCATGCCGGTCC...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTGTGATAGGACCGGCATaGGCCTGGTACTCATTGAAT +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAVIGPA*AWYSLN
Trigger: ATTCAATGAGTACCAGGCCCATGCCGGTCCTATCAC...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTAGCTCCTCCAGGGCCTaGCTCTTGGTCTCATCGTTA +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCSSSRA*LLVSSL
Trigger: TAACGATGAGACCAAGAGCCAGGCCCTGGAGGAGCT...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAGTCTCGTCTCTTTCCTaGATCTCTCGCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTVSSLS*ISRLRP
Trigger: AGGCCTCAAGCGAGAGATCCAGGAAAGAGACGAGAC...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACGTGGTCGGACTTTCTTaGTCAGTTTCAGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDVVGLS*SVSELL
Trigger: AAGCAGCTCTGAAACTGACCAAGAAAGTCCGACCAC...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTACCTGCTCTTGCTCTTaGATCTGGTCTCTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCTCSCS*IWSLRR
Trigger: GCGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGT...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGCCAGAGGGGGTCAGTTaGTCTTCACCTCTAAGTCTA +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLPEGVS*SSPLSL
Trigger: TAGACTTAGAGGTGAAGACCAACTGACCCCCTCTGG...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGTTTCTTCTGGCTGTaGCTGGAGATGGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTCFFWL*LEMAHQ
Trigger: CTGGTGAGCCATCTCCAGCCACAGCCAGAAGAAACA...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTTGTTTCTTCTGGCTGTaGCTGGAGATGGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLCFFWL*LEMAHQ
Trigger: CTGGTGAGCCATCTCCAGCCACAGCCAGAAGAAACA...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTCTCCAACCGCAAGTCTaGCTTGGGGACAGACATGCT +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCLQPQV*LGDRHA
Trigger: AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAG...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCGCTTTCGTTTCTCTCTaGGTCAGCAGACCACGCATG +
Preference number: 4 (lower is better)
Translates to: CTVSEIARYRRLGLMDKAAFVSL*VSRPRM
Trigger: CATGCGTGGTCTGCTGACCCAGAGAGAAACGAAAGC...GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525227.5
CDS-3UTR CCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGCTTTCGTTTCTCTCTaGGTCAGCAGACCACGCATG +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHAAFVSL*VSRPRM
Trigger: CATGCGTGGTCTGCTGACCCAGAGAGAAACGAAAGC...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610710.4
3UTR CAA 72 bp TGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTaGGGGACAGACATGCTGTGTTTCTTCTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CRDHTDSNRKSG*GTDMLCFFWLW
Trigger: CCACAGCCAGAAGAAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTGTTATCCTGTGGACTaGAGCTCACCTGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHACYPVD*SSPGRQ
Trigger: CTGTCTACCAGGTGAGCTTCAGTCCACAGGATAACA...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp ACATCTGGCTATGGCTACTGGCCGCCACCATCTGTTCATAGGAAGGGAGTGGAGCCAGTGACACACACCTaGGTGTTATCCTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: TSGYGYWPPPSVHRKGVEPVTHT*VLSCGL
Trigger: CAGTCCACAGGATAACACTCAGGTGTGTGTCACTGG...CTCCACTCCCTTCCTATGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGGACATCCAGGCTCTTTaGGCCATTGGTAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVDIQAL*AIGRFL
Trigger: AAGGAACCTACCAATGGCTCAAAGAGCCTGGATGTC...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGTCTCTGATTCCTGAATaGCATCCAGGCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQSLIPE*HPGSLS
Trigger: GCTCAAAGAGCCTGGATGTCATTCAGGAATCAGAGA...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAGGCTCTCTGATTCCTaGATGACATCCAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQRLSDS*MTSRLF
Trigger: AAAGAGCCTGGATGTCATTCAGGAATCAGAGAGCCT...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTCCTGTTTGTCAGACTaGCTTGGATCATTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLASCLSD*LGSLLC
Trigger: GCAGAGCAATGATCCAAGTCAGTCTGACAAACAGGA...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCCTGTCAGGGACATGGTaGTGCTGTAGAGTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: CTVSEIARYRRLGLMDKALSGTW*CCRVGS
Trigger: AGAACCAACTCTACAGCATCACCATGTCCCTGACAG...GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGACTGCAGCAAACAGGTaGCCTCCATTGCTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLTAANR*PPLLKE
Trigger: TTCCTTTAGCAATGGAGGTCACCTGTTTGCTGCAGT...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTAATCTGCAATCTCCTTaGGGGTGTGGTCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLANLQSP*GCGLIQ
Trigger: TTGGATCAGACCACACCCTCAAGGAGATTGCAGATT...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTCAATGGCGGTGTAGGTaGCATCAAACGCCGATATCT +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSQWRCR*HQTPIS
Trigger: AGATATCGGCGTTTGATGTCACCTACACCGCCATTG...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAAGCTCCAACATAACCTaGGCCTTTTCTTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGSSNIT*AFSSMS
Trigger: AGACATGGAAGAAAAGGCTCAGGTTATGTTGGAGCT...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACTTGAGCCGCAGGTTTaGTTCCTTTTCATCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRLEPQV*FLFIPK
Trigger: CTTCGGGATGAAAAGGAATCAAACCTGCGGCTCAAG...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTCTTGAGCCGCAGGTTTaGTTCCTTTTCATCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLLEPQV*FLFIPK
Trigger: CTTCGGGATGAAAAGGAATCAAACCTGCGGCTCAAG...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGTTCCTTCATCACCCTaGTCTCATTCTCTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLVPSSP*SHSLEV
Trigger: AACCTCGAGAGAATGAGATCAGGGTGATGAAGGAAC...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGAGACATTTTCCTGCATaGTGCGGACGTAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVRHFPA*CGRSLC
Trigger: GCACAGACTACGTCCGCATCATGCAGGAAAATGTCT...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCACTGACTTGGATCATTaGTCTGCGGGTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: CTVSEIARYRRLGLMDKATDLDH*SAGPQE
Trigger: TTCCTGTGGACCCGCAGAGCAATGATCCAAGTCAGT...GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGACTGACTTGGATCATTaGTCTGCGGGTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVTDLDH*SAGPQE
Trigger: TTCCTGTGGACCCGCAGAGCAATGATCCAAGTCAGT...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGCACATTTCCATTGACTaGAGCAAACAGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQHISID*SKQVTS
Trigger: GGAGGTCACCTGTTTGCTGCAGTCAATGGAAATGTG...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCACACAGCACCATCTGTaGCACCAGAAATCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCTQHHL*HQKSVC
Trigger: GCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGT...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTATCATGCGTCCAGAATaGGAGATGACAATGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSIMRPE*EMTMAV
Trigger: CACCGCCATTGTCATCTCGCATTCTGGACGCATGAT...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTCAACATTCCATGTCCTaGAGTTCCCGGCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLQHSMS*SSRLCL
Trigger: CAAGCAAAGCCGGGAACTGCAGGACATGGAATGTTG...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTCCTGACGTCTTCCTGTaGCTCTTCCAGAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFPDVFL*LFQKGG
Trigger: ACCACCCTTCTGGAAGAGGCACAGGAAGACGTCAGG...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGGTGGCTCTCAGTTTCTaGCACAATTCTGTGATGTTC +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGVALSF*HNSVMF
Trigger: GAACATCACAGAATTGTGGCAGAAACTGAGAGCCAC...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTCCTTCTGTCTCTCTCTaGGCATCTCCTGATCGGTGG +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFPSVSL*ASPDRW
Trigger: CCACCGATCAGGAGATGCGCAGAGAGAGACAGAAGG...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTGTCTGTGTTCAGCCCTaGGATCTCCACCATGTCTGC +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFVCVQP*DLHHVC
Trigger: GCAGACATGGTGGAGATCGCAGGGCTGAACACAGAC...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAGGTCAGTTTCAGAGCTaGTTCAAGGTCATAGACTTG +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGGQFQS*FKVIDL
Trigger: CAAGTCTATGACCTTGAAGCAGCTCTGAAACTGACC...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGTGGATTTCTAGGCGCTaGATTTCAATGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGWISRR*ISMILP
Trigger: TGGGAGGATCATTGAAATGCAGCGCCTAGAAATCCA...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTGGAACCCTGTGACCTaGTCTTGCTCTTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCWNPVT*SCSWIW
Trigger: CCAGATCCAAGAGCAAGAGCAGGTCACAGGGTTCCA...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTTCTTTCGTTTCTCTCTaGGTCAGCAGACCACGCATG +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSSFVSL*VSRPRM
Trigger: CATGCGTGGTCTGCTGACCCAGAGAGAAACGAAAGA...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372492.9
CDS-3UTR CCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGTAGAAGATATTGTTaGCCACGTGGGATCGAAGAC +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDSRRYC*PRGIED
Trigger: GTCTTCGATCCCACGTGGCCAACAATATCTTCTACT...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATTGGGGCATGGACATCTaGCTATGGCTACTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RFFLHSLRDSEVPPIGTDWGMDI*LWLLAA
Trigger: GGCGGCCAGTAGCCATAGCCAGATGTCCATGCCCCA...ATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAGGTTCTTACTGGTGCTaGCAACCAGAGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTGSYWC*QPEFPL
Trigger: CAGAGGAAACTCTGGTTGCCAGCACCAGTAAGAACC...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAGAGTTGGTTCTTACTaGTGCTGGCAACCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGRVGSY*CWQPEF
Trigger: AAACTCTGGTTGCCAGCACCAGTAAGAACCAACTCT...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGAATTCCAAAGGCGGATaGATCGATCCAGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLNSKGG*IDPENR
Trigger: CCTGTTCTCTGGATCGATCCATCCGCCTTTGGAATT...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGTCTCTAGGCTCGTGGTaGTGTAAACGTGAATCACAT +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGSLGSW*CKRESH
Trigger: ATGTGATTCACGTTTACACCACCACGAGCCTAGAGA...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGTGATAGGACCGGCATaGGCCTGGTACTCATTGAAT +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSVIGPA*AWYSLN
Trigger: ATTCAATGAGTACCAGGCCCATGCCGGTCCTATCAC...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TCCTCCAGGGCCTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACAGCTCCTCCAGGGCCTaGCTCTTGGTCTCATCGTTA +
Preference number: 4 (lower is better)
Translates to: SSRAWLLVSSLSRSCFSYSSSRA*LLVSSL
Trigger: TAACGATGAGACCAAGAGCCAGGCCCTGGAGGAGCT...GTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAGGCCCTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACCCTCTTCCAGAAGGGTaGTTTTCTCCTGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDPLPEG*FSPAVL
Trigger: CAAAACTGCAGGAGAAAACCACCCTTCTGGAAGAGG...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGCCTCAATCTGCTTCTTaGTCTCTTCAAACTCCCGCA +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLPQSAS*SLQTPA
Trigger: TGCGGGAGTTTGAAGAGACCAAGAAGCAGATTGAGG...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAGGGTCTCGATGTCATTaGTTCGTTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGGSRCH*FVLQSP
Trigger: AGGAGATTGAAGAACGAACCAATGACATCGAGACCC...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTGGTCTCTGAGGCGCTaGATTTCTAGGCGCTGCATT +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCWSLRR*ISRRCI
Trigger: AATGCAGCGCCTAGAAATCCAGCGCCTCAGAGACCA...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTCTTGCTCTTGGATCTaGTCTCTGAGGCGCTGGATT +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHASCSWI*SLRRWI
Trigger: AATCCAGCGCCTCAGAGACCAGATCCAAGAGCAAGA...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTCCAGAGGGGGTCAGTTaGTCTTCACCTCTAAGTCTA +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSPEGVS*SSPLSL
Trigger: TAGACTTAGAGGTGAAGACCAACTGACCCCCTCTGG...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
3UTR CAA 72 bp ATGGATCGATCCAGAGAACAGGTGGCTATAAGGGGTTaGCGGATGCAGGTAGCTAGACCGGTGATGGGTGCT +
Preference number: 4 (lower is better)
Translates to: MDRSREQVAIRG*RMQVARPVMGA
Trigger: AGCACCCATCACCGGTCTAGCTACCTGCATCCGCAAACCCCTTATAGCCACCTGTTCTCTGGATCGATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGCCCTGACTCTTCTCTaGGCCTGGAATGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSALTLL*AWNEFL
Trigger: CAAAAATTCATTCCAGGCTCAGAGAAGAGTCAGGGC...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGGCCCTGACTCTTCTCTaGGCCTGGAATGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVALTLL*AWNEFL
Trigger: CAAAAATTCATTCCAGGCTCAGAGAAGAGTCAGGGC...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGCCGGCAAGGGATGGATaGCAATTCATAAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLPARDG*QFINGD
Trigger: ATCACCATTTATGAATTGTCATCCATCCCTTGCCGG...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGACATCCCATTTCCAGTaGCACACACCTGAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLTSHFQ*HTPECY
Trigger: ATAACACTCAGGTGTGTGTCACTGGAAATGGGATGT...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCACATCCCATTTCCAGTaGCACACACCTGAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCTSHFQ*HTPECY
Trigger: ATAACACTCAGGTGTGTGTCACTGGAAATGGGATGT...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATCTCTGATTCCTGAATaGCATCCAGGCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTSLIPE*HPGSLS
Trigger: GCTCAAAGAGCCTGGATGTCATTCAGGAATCAGAGA...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCAACATGCCCAGGCTCTCTGATTCCTaGATGACATCCAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SEIARYRRLGLMDKANMPRLSDS*MTSRLF
Trigger: AAAGAGCCTGGATGTCATTCAGGAATCAGAGAGCCT...GGGCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGACAGGCAAATCCCTTTaGATAGGCTGCAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLTGKSL*IGCNGK
Trigger: TTTGCCATTGCAGCCTATTCAAAGGGATTTGCCTGT...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTCAGATGGATGAAGGCTaGTGGAATATGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAQMDEG*WNMPLL
Trigger: AAGAAGAGGCATATTCCATCAGCCTTCATCCATCTG...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGCAGATGGATGAAGGCTaGTGGAATATGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQQMDEG*WNMPLL
Trigger: AAGAAGAGGCATATTCCATCAGCCTTCATCCATCTG...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGAAGTGTCCAGATGGATaGAGGCTGATGGAATATGCC +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVKCPDG*RLMEYA
Trigger: GGCATATTCCATCAGCCTTCATCCATCTGGACACTT...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCAACATGCCCAAGTGTCCAGATGGATaGAGGCTGATGGAATATGCC +
Preference number: 4 (lower is better)
Translates to: SEIARYRRLGLMDKANMPKCPDG*RLMEYA
Trigger: GGCATATTCCATCAGCCTTCATCCATCTGGACACTT...GGGCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTACTGCAGCAAACAGGTaGCCTCCATTGCTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHATAANR*PPLLKE
Trigger: TTCCTTTAGCAATGGAGGTCACCTGTTTGCTGCAGT...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGGAATCACATTTCCATTaGCTGCAGCAAACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQESHFH*LQQTGD
Trigger: GTCACCTGTTTGCTGCAGTCAATGGAAATGTGATTC...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCTGCATTCCACACAATTaGGCGAATCTTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: CTVSEIARYRRLGLMDKACIPHN*ANLPCV
Trigger: CACACAGGGAAGATTCGCTCAATTGTGTGGAATGCA...GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGATGCATTCCACACAATTaGGCGAATCTTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRCIPHN*ANLPCV
Trigger: CACACAGGGAAGATTCGCTCAATTGTGTGGAATGCA...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGCTTGAGGGTGTGGTCTaGTCCAACAGCAAAGATAAT +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLLEGVV*SNSKDN
Trigger: ATTATCTTTGCTGTTGGATCAGACCACACCCTCAAG...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAAATCTGCAATCTCCTTaGGGGTGTGGTCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTNLQSP*GCGLIQ
Trigger: TTGGATCAGACCACACCCTCAAGGAGATTGCAGATT...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CCATCTTCTCAAACAGCAGAACTCTCCCTGGCCCAGCAGAACAGGCAAATCCCTGGGCCTGGTACTCATTaGATTCCTTCTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PSSQTAELSLAQQNRQIPGPGTH*IPSAEA
Trigger: TGCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCC...AGGGATTTGCCTGTTCTGCTGGGCCAGGGAGAGTTCTGCTGTTTGAGAAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGAGCTCCAACATAACCTaGGCCTTTTCTTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLSSNIT*AFSSMS
Trigger: AGACATGGAAGAAAAGGCTCAGGTTATGTTGGAGCT...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTCGCTTCTCCTTGTCTTaGATAGTCTCGTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSRFSLS*IVSSLS
Trigger: GGAAAGAGACGAGACTATTCAAGACAAGGAGAAGCG...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACACGCTTCTCCTTGTCTTaGATAGTCTCGTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTRFSLS*IVSSLS
Trigger: GGAAAGAGACGAGACTATTCAAGACAAGGAGAAGCG...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGTTCCTTCATCACCCTaGTCTCATTCTCTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSVPSSP*SHSLEV
Trigger: AACCTCGAGAGAATGAGATCAGGGTGATGAAGGAAC...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGATCTGCCACAATTCTGTaGTGTTCAGCTCCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRSATIL*CSAPVE
Trigger: CTCAACTGGAGCTGAACATCACAGAATTGTGGCAGA...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTCTGAAGTTGTATAAGTaGATCTCGACCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCLKLYK*ISTLWG
Trigger: GCCCCAGAGGGTCGAGATTCACTTATACAACTTCAG...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610710.4
CDS-3UTR GCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTGTTTGCCTGTGTCAGTaGCAACGACAATCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAVCLCQ*QRQSCH
Trigger: ATGACAAGATTGTCGTTGGCACTGACACAGGCAAAC...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGTTGGTTCTTACTGGTaGTGGCAACCAGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLVGSYW*WQPEFP
Trigger: AGGAAACTCTGGTTGCCAGCACCAGTAAGAACCAAC...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACGTGATGGGTGCTGAGTaGAATGGATACATCAAATAC +
Preference number: 4 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDVMGAE*NGYIKY
Trigger: GTATTTGATGTATCCATTGCACTCAGCACCCATCAC...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GAGGCAGAGGGTACTTCATGGCACGAATGGTTCCCACCGAGGTGCCCACAAACACACATTTCCATTGACTaGAGCAAACAGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: EAEGTSWHEWFPPRCPQTHISID*SKQVTS
Trigger: GGAGGTCACCTGTTTGCTGCAGTCAATGGAAATGTG...TGTTTGTGGGCACCTCGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACACATTTCCATTGACTaGAGCAAACAGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRHISID*SKQVTS
Trigger: GGAGGTCACCTGTTTGCTGCAGTCAATGGAAATGTG...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGACACAGCACCATCTGTaGCACCAGAAATCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVTQHHL*HQKSVC
Trigger: GCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGT...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTAAGGATCAAGGAATCTaGAATCTCCTTGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAKDQGI*NLLEGV
Trigger: CACACCCTCAAGGAGATTGCAGATTCCTTGATCCTT...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGTCATTGAATTCCTTCTaGAGAGGCAGAGGGTACTTC +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLSLNSF*RGRGYF
Trigger: GAAGTACCCTCTGCCTCTGCAGAAGGAATTCAATGA...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CCGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTTGAGCTGCAGCTCCTCTGGGACTTGAGCTaGAGCTCCTGGTACTTCTCA +
Preference number: 4 (lower is better)
Translates to: PELFFILFLHPLGLELQLLWDLS*SSWYFS
Trigger: TGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAG...GAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR GCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTTTTCATACTCTTCCTaGATCCTCTGGGACTTGAGC +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAFSYSS*ILWDLS
Trigger: GCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAA...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGACTTAATGACTCCTTaGAGCTTCATCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLDLMTP*SFICSP
Trigger: AGGAGAGCAGATGAAGCTGCAAGGAGTCATTAAGTC...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTGACTTAATGACTCCTTaGAGCTTCATCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLADLMTP*SFICSP
Trigger: AGGAGAGCAGATGAAGCTGCAAGGAGTCATTAAGTC...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAACCATGTCTGCTCGCTaGACGTACTTCTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRTMSAR*TYFSKR
Trigger: TCTCTTTGAGAAGTACGTGCAGCGAGCAGACATGGT...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGGTCAGTTTCAGAGCTaGTTCAAGGTCATAGACTTG +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLGQFQS*FKVIDL
Trigger: CAAGTCTATGACCTTGAAGCAGCTCTGAAACTGACC...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACTGGATTTCTAGGCGCTaGATTTCAATGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDWISRR*ISMILP
Trigger: TGGGAGGATCATTGAAATGCAGCGCCTAGAAATCCA...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACTGAGTGTTATCCTGTaGACTGAAGCTCACCTGGTA +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRLSVIL*TEAHLV
Trigger: TACCAGGTGAGCTTCAGTCCACAGGATAACACTCAG...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACTGGAGAACTGACTGGTaGAAATTCAATCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDWRTDW*KFNQAL
Trigger: GAGAGCCTGATTGAATTTCCACCAGTCAGTTCTCCA...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTGAATAGGCTGCAATaGCAAACACCTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCLNRLQ*QTPGAW
Trigger: CCATGCCCCAGGTGTTTGCCATTGCAGCCTATTCAA...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTTCTCTAGGCTCGTaGTGGTGTAAACGTGAATCA +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCCSLGS*WCKRES
Trigger: TGATTCACGTTTACACCACCACGAGCCTAGAGAACA...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAATCTCCTTGAGGGTGTaGTCTGATCCAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTISLRV*SDPTAK
Trigger: CTTTGCTGTTGGATCAGACCACACCCTCAAGGAGAT...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGATCTCCTTGAGGGTGTaGTCTGATCCAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVISLRV*SDPTAK
Trigger: CTTTGCTGTTGGATCAGACCACACCCTCAAGGAGAT...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGGAAGAGTTTGCCTGTGTCAGTGCCAACGACAATCTTGTCATCAGCCACCCAGGCAGAGGGTACTTCATaGCACGAATGGTTCCCACCG +
Preference number: 4 (lower is better)
Translates to: RKSLPVSVPTTILSSATQAEGTS*HEWFPP
Trigger: CGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGC...CTGGGTGGCTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTCCTCTTCCAGAAGGGTaGTTTTCTCCTGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLPLPEG*FSPAVL
Trigger: CAAAACTGCAGGAGAAAACCACCCTTCTGGAAGAGG...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACCTCAATCTGCTTCTTaGTCTCTTCAAACTCCCGCA +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRPQSAS*SLQTPA
Trigger: TGCGGGAGTTTGAAGAGACCAAGAAGCAGATTGAGG...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGTCTCGATGTCATTaGTTCGTTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLGSRCH*FVLQSP
Trigger: AGGAGATTGAAGAACGAACCAATGACATCGAGACCC...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTTCTCGCTTGAGGCCTTaGATGTCCTTCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFSRLRP*MSFSRD
Trigger: GTCTCTGGAGAAGGACATCCAAGGCCTCAAGCGAGA...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTGCATCTCCTGATCGGTaGCTCTCAGTTTCTGCCACA +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFASPDR*LSVSAT
Trigger: TGTGGCAGAAACTGAGAGCCACCGATCAGGAGATGC...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGTGGTCGGACTTTCTTaGTCAGTTTCAGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSVVGLS*SVSELL
Trigger: AAGCAGCTCTGAAACTGACCAAGAAAGTCCGACCAC...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTGTGGGACTGGGTTCCTaGGGAGAGGGCCCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: CLCIRLSMDAWLLPHFDCVGLGS*GEGPAH
Trigger: GTGAGCAGGGCCCTCTCCCCAGGAACCCAGTCCCAC...ACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGGGCCACTTTAGAATaGGGTCATTCTCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSGATLE*GHSPES
Trigger: AGATTCAGGAGAATGACCCCATTCTAAAGTGGCCCC...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610710.4
CDS-3UTR TCA 90 bp AGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATCTACCACGGCTGACATaGTCTCCCGCCAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: RFFLHSLRDSEVPPIGTDLPRLT*SPAKQF
Trigger: GAACTGTTTGGCGGGAGATCATGTCAGCCGTGGTAG...ATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR TCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGCCGGCAAGGGATGGATaGCAATTCATAAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVPARDG*QFINGD
Trigger: ATCACCATTTATGAATTGTCATCCATCCCTTGCCGG...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTTCAATCAGGCTCTCTaGTTCCTGAATGACATCCAG +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHAFNQAL*FLNDIQ
Trigger: CTGGATGTCATTCAGGAATCAGAGAGCCTGATTGAA...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATTCAATCAGGCTCTCTaGTTCCTGAATGACATCCAG +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTFNQAL*FLNDIQ
Trigger: CTGGATGTCATTCAGGAATCAGAGAGCCTGATTGAA...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTACAGGCAAATCCCTTTaGATAGGCTGCAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHATGKSL*IGCNGK
Trigger: TTTGCCATTGCAGCCTATTCAAAGGGATTTGCCTGT...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGAAACCAGAGTTTCCTCTaGGGGGCTGAAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: FFLHSLRDSEVPPIGTDGNQSFL*GAEAQA
Trigger: TGCCTGTGCTTCAGCCCCTCAGAGGAAACTCTGGTT...TCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGCAAACCCTACTACAATaGAGTGTCCAGATGGATGAA +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLQTLLQ*SVQMDE
Trigger: TTCATCCATCTGGACACTTCATTGTAGTAGGGTTTG...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCCAAACCCTACTACAATaGAGTGTCCAGATGGATGAA +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCQTLLQ*SVQMDE
Trigger: TTCATCCATCTGGACACTTCATTGTAGTAGGGTTTG...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGAATCACATTTCCATTaGCTGCAGCAAACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSESHFH*LQQTGD
Trigger: GTCACCTGTTTGCTGCAGTCAATGGAAATGTGATTC...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GAGGCAGAGGGTACTTCATGGCACGAATGGTTCCCACCGAGGTGCCCACAAACAGAATCACATTTCCATTaGCTGCAGCAAACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: EAEGTSWHEWFPPRCPQTESHFH*LQQTGD
Trigger: GTCACCTGTTTGCTGCAGTCAATGGAAATGTGATTC...TGTTTGTGGGCACCTCGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTCTTGAGGGTGTGGTCTaGTCCAACAGCAAAGATAAT +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLLEGVV*SNSKDN
Trigger: ATTATCTTTGCTGTTGGATCAGACCACACCCTCAAG...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAACTCCATTTCCTGGATaGACTTGTCTGTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRTPFPG*TCLLAP
Trigger: AGGAGCTAACAGACAAGTTCATCCAGGAAATGGAGT...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTACTCCATTTCCTGGATaGACTTGTCTGTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSTPFPG*TCLLAP
Trigger: AGGAGCTAACAGACAAGTTCATCCAGGAAATGGAGT...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAGTTTGCCTGTGTCAGTaGCAACGACAATCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRVCLCQ*QRQSCH
Trigger: ATGACAAGATTGTCGTTGGCACTGACACAGGCAAAC...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTCAAAGAGGAAGAGTTTaGCTGTGTCAGTGCCAACGA +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCQRGRV*LCQCQR
Trigger: TCGTTGGCACTGACACAGGCAAACTCTTCCTCTTTG...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGGTGATGGGTGCTGAGTaGAATGGATACATCAAATAC +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQVMGAE*NGYIKY
Trigger: GTATTTGATGTATCCATTGCACTCAGCACCCATCAC...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAAGGCTGATGGAATATaGCTCTTCTTGGTATTCCTT +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGKADGI*LFLVFL
Trigger: AAGGAATACCAAGAAGAGGCATATTCCATCAGCCTT...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACACCAGAAATCAGTTTaGTATCATCTGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGHQKSV*YHLHST
Trigger: TGTGGAATGCAGATGATAGCAAACTGATTTCTGGTG...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAAAGGATCAAGGAATCTaGAATCTCCTTGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTKDQGI*NLLEGV
Trigger: CACACCCTCAAGGAGATTGCAGATTCCTTGATCCTT...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CCATCTTCTCAAACAGCAGAACTCTCCCTGGCCCAGCAGAACAGGCAAATCCCTATCATGCGTCCAGAATaGGAGATGACAATGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PSSQTAELSLAQQNRQIPIMRPE*EMTMAV
Trigger: CACCGCCATTGTCATCTCGCATTCTGGACGCATGAT...AGGGATTTGCCTGTTCTGCTGGGCCAGGGAGAGTTCTGCTGTTTGAGAAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTTCATTGAATTCCTTCTaGAGAGGCAGAGGGTACTTC +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLSLNSF*RGRGYF
Trigger: GAAGTACCCTCTGCCTCTGCAGAAGGAATTCAATGA...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGGCAACTTTTGGTTGTTaGAACATTCCATGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQATFGC*NIPCPA
Trigger: TGCAGGACATGGAATGTTGCAACAACCAAAAGTTGC...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTTTTTCATACTCTTCCTaGATCCTCTGGGACTTGAGC +
Preference number: 4 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSFSYSS*ILWDLS
Trigger: GCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAA...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACTTTCTCCTGCAGTTTTaGCTCGTAAAACTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDFLLQF*LVKLSQ
Trigger: CTGACTGAGTTTTACGAGGCAAAACTGCAGGAGAAA...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTTCTCCTGCAGTTTTaGCTCGTAAAACTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCFLLQF*LVKLSQ
Trigger: CTGACTGAGTTTTACGAGGCAAAACTGCAGGAGAAA...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGATATTGTTGGCCACGTaGGATCGAAGACCAAAAACA +
Preference number: 4 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLILLAT*DRRPKT
Trigger: TGTTTTTGGTCTTCGATCCCACGTGGCCAACAATAT...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCAGTAGAAGATATTGTTaGCCACGTGGGATCGAAGAC +
Preference number: 4 (lower is better)
Translates to: CTVSEIARYRRLGLMDKASRRYC*PRGIED
Trigger: GTCTTCGATCCCACGTGGCCAACAATATCTTCTACT...GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR CCA 90 bp AACACCTGGGGCATGGACATCTGGCTATGGCTACTGGCCGCCACCATCTGTTCAAGTAGAAGATATTGTTaGCCACGTGGGATCGAAGAC +
Preference number: 4 (lower is better)
Translates to: NTWGMDIWLWLLAATICSSRRYC*PRGIED
Trigger: GTCTTCGATCCCACGTGGCCAACAATATCTTCTACT...TGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGATGTCCATGCCCCAGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAAGTAGAAGATATTGTTaGCCACGTGGGATCGAAGAC +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTSRRYC*PRGIED
Trigger: GTCTTCGATCCCACGTGGCCAACAATATCTTCTACT...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGAGCCAATAGGTATTTaGAGTCTGGAGAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLEPIGI*SLEKKP
Trigger: TGGCTTTTTCTCCAGACTCCAAATACCTATTGGCTC...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTTGGAGAACTGACTGGTaGAAATTCAATCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLWRTDW*KFNQAL
Trigger: GAGAGCCTGATTGAATTTCCACCAGTCAGTTCTCCA...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGAATGGACATCTGGCTATaGCTACTGGCCGCCACCATC +
Preference number: 4 (lower is better)
Translates to: FFLHSLRDSEVPPIGTDGMDIWL*LLAATI
Trigger: GATGGTGGCGGCCAGTAGCCATAGCCAGATGTCCAT...TCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp CGAGGTGCCCACAAACATCATGCGTCCAGAATGCGAGATGACAATGGCGGTGTATTGAATAGGCTGCAATaGCAAACACCTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: RGAHKHHASRMRDDNGGVLNRLQ*QTPGAW
Trigger: CCATGCCCCAGGTGTTTGCCATTGCAGCCTATTCAA...TACACCGCCATTGTCATCTCGCATTCTGGACGCATGATGTTTGTGGGCACCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp CCATCTTCTCAAACAGCAGAACTCTCCCTGGCCCAGCAGAACAGGCAAATCCCTGGTTCTTACTGGTGCTaGCAACCAGAGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PSSQTAELSLAQQNRQIPGSYWC*QPEFPL
Trigger: CAGAGGAAACTCTGGTTGCCAGCACCAGTAAGAACC...AGGGATTTGCCTGTTCTGCTGGGCCAGGGAGAGTTCTGCTGTTTGAGAAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTGGTTCTTACTGGTGCTaGCAACCAGAGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFGSYWC*QPEFPL
Trigger: CAGAGGAAACTCTGGTTGCCAGCACCAGTAAGAACC...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTAGAGTTGGTTCTTACTaGTGCTGGCAACCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHARVGSY*CWQPEF
Trigger: AAACTCTGGTTGCCAGCACCAGTAAGAACCAACTCT...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTAATTCCAAAGGCGGATaGATCGATCCAGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCNSKGG*IDPENR
Trigger: CCTGTTCTCTGGATCGATCCATCCGCCTTTGGAATT...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTCTCTAGGCTCGTGGTaGTGTAAACGTGAATCACAT +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHASLGSW*CKRESH
Trigger: ATGTGATTCACGTTTACACCACCACGAGCCTAGAGA...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCAACATGCCCTCTCTAGGCTCGTGGTaGTGTAAACGTGAATCACAT +
Preference number: 4 (lower is better)
Translates to: SEIARYRRLGLMDKANMPSLGSW*CKRESH
Trigger: ATGTGATTCACGTTTACACCACCACGAGCCTAGAGA...GGGCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAAGGACTCCATTTCCTaGATGAACTTGTCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQKDSIS*MNLSVS
Trigger: GCTAACAGACAAGTTCATCCAGGAAATGGAGTCCTT...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTAAGGACTCCATTTCCTaGATGAACTTGTCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAKDSIS*MNLSVS
Trigger: GCTAACAGACAAGTTCATCCAGGAAATGGAGTCCTT...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTTGAGCTGCAGCTCCTaGTACTTCTCATATTCTAGA +
Preference number: 4 (lower is better)
Translates to: VAGVSAAGTIQTPTASLALSCSS*YFSYSR
Trigger: TCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAA...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp ACGGCATCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGAGGCAGGTGTGGGACTaGGTTCCTGGGGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TASTKRPLIMHNIMVKTLRQVWD*VPGERA
Trigger: GGCCCTCTCCCCAGGAACCCAGTCCCACACCTGCCT...CAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGATGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp AGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATAAAACATGCAGCGTCTaGGCTACCACGGCTGACATG +
Preference number: 4 (lower is better)
Translates to: RFFLHSLRDSEVPPIGTDKTCSV*ATTADM
Trigger: CATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTT...ATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR TCA 90 bp GCAATCTCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGACCGCCGATTGGGACTaGTGGACAAGGCCAACATGC +
Preference number: 4 (lower is better)
Translates to: AISLRVWSDPTAKIILASTADWD*WTRPTC
Trigger: GCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGT...CGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGAGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp CGGATGCAGGTAGCTAGACCGGTGATGGGTGCTGAGTGCAATGGATACATCAAATGTTATCCTGTGGACTaGAGCTCACCTGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: RMQVARPVMGAECNGYIKCYPVD*SSPGRQ
Trigger: CTGTCTACCAGGTGAGCTTCAGTCCACAGGATAACA...TTTGATGTATCCATTGCACTCAGCACCCATCACCGGTCTAGCTACCTGCATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGGGGGAGCTGGTCTCCCAACGCTaGTCTCCAGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLRVWSDPTAKIILASGELVSQR*SPDSKR
Trigger: CCTCTTTGAATCTGGAGATCAGCGTTGGGAGACCAG...CTCCCCCGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp GAAGAGTTTGCCTGTGTCAGTGCCAACGACAATCTTGTCATCAGCCACCCAGGTACCGGTGATGGGTGCTaGGTGCAATGGATACATCAA +
Preference number: 4 (lower is better)
Translates to: EEFACVSANDNLVISHPGTGDGC*VQWIHQ
Trigger: TTGATGTATCCATTGCACTCAGCACCCATCACCGGT...ACCTGGGTGGCTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp GTGATGGCAGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGTGTAGCTGCAAGACTTaGGCACGCATTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: VMAGFSCTVSEIARYRRLCSCKT*ARILSL
Trigger: GAGAGACAGAATGCGTGCTCAAGTCTTGCAGCTACA...CAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCTGCCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp CGGATGCAGGTAGCTAGACCGGTGATGGGTGCTGAGTGCAATGGATACATCAAACAATGGCGGTGTAGGTaGCATCAAACGCCGATATCT +
Preference number: 4 (lower is better)
Translates to: RMQVARPVMGAECNGYIKQWRCR*HQTPIS
Trigger: AGATATCGGCGTTTGATGTCACCTACACCGCCATTG...TTTGATGTATCCATTGCACTCAGCACCCATCACCGGTCTAGCTACCTGCATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGTCCTTTAGTCGGAGTTaGTACTCATTCTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGSFSRS*YSFSIF
Trigger: AAAAATGGAGAATGAGTATCAACTCCGACTAAAGGA...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAATGTTCAGCTCCAGTTaGGTGTTCTGCTTATGGAAA +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTMFSSS*VFCLWK
Trigger: TTTCCATAAGCAGAACACTCAACTGGAGCTGAACAT...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp TGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCGTACAGCAGCCAGAATaGACCTGGAATGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: CTVSEIARYRRLGLMDKAVQQPE*TWNEFL
Trigger: CAAAAATTCATTCCAGGTTCATTCTGGCTGCTGTAC...GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR TCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTATGGGGTCATTCTCCTaGATCTGTTCCTTCATCACC +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFMGSFS*ICSFIT
Trigger: GGTGATGAAGGAACAGATTCAGGAGAATGACCCCAT...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610710.4
CDS-3UTR TCA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGTCCTCACCTGCTTTCTaGAGTTGTATAAGTGAATCT +
Preference number: 4 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQSSPAF*SCISES
Trigger: AGATTCACTTATACAACTTCAGAAAGCAGGTGAGGA...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610710.4
CDS-3UTR GCA 90 bp GGCACGAATGGTTCCCACCGAGGTGCCCACAAACATCATGCGTCCAGAATGCGAGTGATGGGTGCTGAGTaGAATGGATACATCAAATAC +
Preference number: 4 (lower is better)
Translates to: GTNGSHRGAHKHHASRMRVMGAE*NGYIKY
Trigger: GTATTTGATGTATCCATTGCACTCAGCACCCATCAC...TCGCATTCTGGACGCATGATGTTTGTGGGCACCTCGGTGGGAACCATTCGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp GGCAGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTACACAGCACCATCTGTaGCACCAGAAATCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: GRFFLHSLRDSEVPPIGTTQHHL*HQKSVC
Trigger: GCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGT...AGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp GAGCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTTGAGCTGCAGCTCCTGCAACATTCCATGTCCTaGAGTTCCCGGCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ELFFILFLHPLGLELQLLQHSMS*SSRLCL
Trigger: CAAGCAAAGCCGGGAACTGCAGGACATGGAATGTTG...CAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CCA 90 bp TGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCATATTGTTGGCCACGTaGGATCGAAGACCAAAAACA +
Preference number: 4 (lower is better)
Translates to: CTVSEIARYRRLGLMDKAILLAT*DRRPKT
Trigger: TGTTTTTGGTCTTCGATCCCACGTGGCCAACAATAT...GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR CCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTGCTTCCGGCAAGGGATaGATGACAATTCATAAATGG +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCASGKG*MTIHKW
Trigger: CCATTTATGAATTGTCATCCATCCCTTGCCGGAAGC...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGGAGCCAATAGGTATTTaGAGTCTGGAGAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVEPIGI*SLEKKP
Trigger: TGGCTTTTTCTCCAGACTCCAAATACCTATTGGCTC...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTGTTCTCTAGGCTCGTaGTGGTGTAAACGTGAATCA +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCCSLGS*WCKRES
Trigger: TGATTCACGTTTACACCACCACGAGCCTAGAGAACA...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGATTGAGCTGCAGCTCCTaGTACTTCTCATATTCTAGA +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRLSCSS*YFSYSR
Trigger: TCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAA...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TTTTGGTTGTTGCAACATTCCATGTCCTGCAGTTCCCGGCTTTGCTTGTCTAGGTCTTCCTGCATCCTCTaGGACTTGAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FWLLQHSMSCSSRLCLSRSSCIL*DLSCSS
Trigger: GGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGA...CCTAGACAAGCAAAGCCGGGAACTGCAGGACATGGAATGTTGCAACAACCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CCA 90 bp CTCTGTCTTTGTGATTCTGACTGCTCCAAGTATCTCCTAAAAGTGGAATCACACCGTAGCAGGCAGGTGTaGGACTGGGTTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LCLCDSDCSKYLLKVESHRSRQV*DWVPGE
Trigger: CTCCCCAGGAACCCAGTCCCACACCTGCCTGCTACG...GTGTGATTCCACTTTTAGGAGATACTTGGAGCAGTCAGAATCACAAAGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGCACACAGTGATTTCCTaGAGGAAATATAATGATCTG +
Preference number: 4 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLHTVIS*RKYNDL
Trigger: CAGATCATTATATTTCCTTCAGGAAATCACTGTGTG...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCACAATTCATAAATGGTaGTGGCAGGTTTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCTIHKW*WQVFLA
Trigger: TGCAAGAAAAACCTGCCATCACCATTTATGAATTGT...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp CAGCACCATCTGTGCCACCAGAAATCAGTTTGCTATCATCTGCATTCCACACAATGGGGTTCTCCCCTCTaGAAGCTGGTTTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QHHLCHQKSVCYHLHSTQWGSPL*KLVCFR
Trigger: CCTGAAGCAAACCAGCTTTCAGAGGGGAGAACCCCA...TTGTGTGGAATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp GTGATGGCAGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGTCTCTGATTCCTGAATaGCATCCAGGCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: VMAGFSCTVSEIARYRRLSLIPE*HPGSLS
Trigger: GCTCAAAGAGCCTGGATGTCATTCAGGAATCAGAGA...CAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCTGCCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp GTGATGGCAGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGTCCTGTTTGTCAGACTaGCTTGGATCATTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VMAGFSCTVSEIARYRRLSCLSD*LGSLLC
Trigger: GCAGAGCAATGATCCAAGTCAGTCTGACAAACAGGA...CAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCTGCCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TTCCAAAGGCGGATGGATCGATCCAGAGAACAGGTGGCTATAAGGGGTTTGCGGCTTGAGGGTGTGGTCTaGTCCAACAGCAAAGATAAT +
Preference number: 4 (lower is better)
Translates to: FQRRMDRSREQVAIRGLRLEGVV*SNSKDN
Trigger: ATTATCTTTGCTGTTGGATCAGACCACACCCTCAAG...CCGCAAACCCCTTATAGCCACCTGTTCTCTGGATCGATCCATCCGCCTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACTCCTTTAGTCGGAGTTaGTACTCATTCTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDSFSRS*YSFSIF
Trigger: AAAAATGGAGAATGAGTATCAACTCCGACTAAAGGA...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTATGTTCAGCTCCAGTTaGGTGTTCTGCTTATGGAAA +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCMFSSS*VFCLWK
Trigger: TTTCCATAAGCAGAACACTCAACTGGAGCTGAACAT...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAAAGGCTGATGGAATATaGCTCTTCTTGGTATTCCTT +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRKADGI*LFLVFL
Trigger: AAGGAATACCAAGAAGAGGCATATTCCATCAGCCTT...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GAGGCAGAGGGTACTTCATGGCACGAATGGTTCCCACCGAGGTGCCCACAAACAAAGGCTGATGGAATATaGCTCTTCTTGGTATTCCTT +
Preference number: 4 (lower is better)
Translates to: EAEGTSWHEWFPPRCPQTKADGI*LFLVFL
Trigger: AAGGAATACCAAGAAGAGGCATATTCCATCAGCCTT...TGTTTGTGGGCACCTCGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACACCAGAAATCAGTTTaGTATCATCTGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRHQKSV*YHLHST
Trigger: TGTGGAATGCAGATGATAGCAAACTGATTTCTGGTG...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTGTGGCTCTCAGTTTCTaGCACAATTCTGTGATGTTC +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFVALSF*HNSVMF
Trigger: GAACATCACAGAATTGTGGCAGAAACTGAGAGCCAC...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CATCTTCTCAAACAGCAGAACTCTCCCTGGCCCAGCAGAACAGGCAAATCCCTTCTGAGTGTTATCCTGTaGACTGAAGCTCACCTGGTA +
Preference number: 4 (lower is better)
Translates to: HLLKQQNSPWPSRTGKSLLSVIL*TEAHLV
Trigger: TACCAGGTGAGCTTCAGTCCACAGGATAACACTCAG...AAGGGATTTGCCTGTTCTGCTGGGCCAGGGAGAGTTCTGCTGTTTGAGAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp TTCCAAAGGCGGATGGATCGATCCAGAGAACAGGTGGCTATAAGGGGTTTGCGGTGGAGAACTGACTGGTaGAAATTCAATCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: FQRRMDRSREQVAIRGLRWRTDW*KFNQAL
Trigger: GAGAGCCTGATTGAATTTCCACCAGTCAGTTCTCCA...CCGCAAACCCCTTATAGCCACCTGTTCTCTGGATCGATCCATCCGCCTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGGAATATGCCTCTTCTTaGTATTCCTTAAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGEYASS*YSLNSS
Trigger: GGAACTATTTAAGGAATACCAAGAAGAGGCATATTC...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGAGTGATAGGACCGGCATaGGCCTGGTACTCATTGAAT +
Preference number: 4 (lower is better)
Translates to: FFLHSLRDSEVPPIGTDGVIGPA*AWYSLN
Trigger: ATTCAATGAGTACCAGGCCCATGCCGGTCCTATCAC...TCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTCTAGAAGCAACTTTTaGTTGTTGCAACATTCCATG +
Preference number: 4 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCSRSNF*LLQHSM
Trigger: CATGGAATGTTGCAACAACCAAAAGTTGCTTCTAGA...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR TCA 90 bp GTGATGGCAGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGCCGGCAAGGGATGGATaGCAATTCATAAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: VMAGFSCTVSEIARYRRLPARDG*QFINGD
Trigger: ATCACCATTTATGAATTGTCATCCATCCCTTGCCGG...CAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCTGCCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR TCA 90 bp AGGAAGAGTTTGCCTGTGTCAGTGCCAACGACAATCTTGTCATCAGCCACCCAGACATCCCATTTCCAGTaGCACACACCTGAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: RKSLPVSVPTTILSSATQTSHFQ*HTPECY
Trigger: ATAACACTCAGGTGTGTGTCACTGGAAATGGGATGT...CTGGGTGGCTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACTTCAATCAGGCTCTCTaGTTCCTGAATGACATCCAG +
Preference number: 4 (lower is better)
Translates to: FSCTVSEIARYRRLGLMDFNQAL*FLNDIQ
Trigger: CTGGATGTCATTCAGGAATCAGAGAGCCTGATTGAA...GTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp CGGATGCAGGTAGCTAGACCGGTGATGGGTGCTGAGTGCAATGGATACATCAAACAGATGGATGAAGGCTaGTGGAATATGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RMQVARPVMGAECNGYIKQMDEG*WNMPLL
Trigger: AAGAAGAGGCATATTCCATCAGCCTTCATCCATCTG...TTTGATGTATCCATTGCACTCAGCACCCATCACCGGTCTAGCTACCTGCATCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp AGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATACTGCAGCAAACAGGTaGCCTCCATTGCTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: RFFLHSLRDSEVPPIGTDTAANR*PPLLKE
Trigger: TTCCTTTAGCAATGGAGGTCACCTGTTTGCTGCAGT...ATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTAGTCAAGCACAAACTTaGATTTCCCTAGTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLSQAQT*ISLVLD
Trigger: ATCAAGAACTAGGGAAATTCAAGTTTGTGCTTGACT...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp AGGAAGAGTTTGCCTGTGTCAGTGCCAACGACAATCTTGTCATCAGCCACCCAGAAGGATCAAGGAATCTaGAATCTCCTTGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RKSLPVSVPTTILSSATQKDQGI*NLLEGV
Trigger: CACACCCTCAAGGAGATTGCAGATTCCTTGATCCTT...CTGGGTGGCTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp CTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATTGCAGTTCCCGGCTTTaGTTGTCTAGGAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LALGLIVIPELFFILFLHCSSRL*LSRRSS
Trigger: AGAAGACCTCCTAGACAAGCAAAGCCGGGAACTGCA...ATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR GCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTGCAACTTTTGGTTGTTaGAACATTCCATGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFATFGC*NIPCPA
Trigger: TGCAGGACATGGAATGTTGCAACAACCAAAAGTTGC...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp GCCTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCTTTTCATACTCTTCCTaGATCCTCTGGGACTTGAGC +
Preference number: 4 (lower is better)
Translates to: AWLLVSSLSRSCFSYSSCFSYSS*ILWDLS
Trigger: GCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAA...GCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR GCA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTCTCGAGGTTCTATTTaGTTCTTCAGCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVSRGSI*FFSSFI
Trigger: AATAAAGGAGCTGAAGAAGCAAATAGAACCTCGAGA...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATCTCGAGGTTCTATTTaGTTCTTCAGCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTSRGSI*FFSSFI
Trigger: AATAAAGGAGCTGAAGAAGCAAATAGAACCTCGAGA...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GTGATGGCAGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGCTTCCGGCAAGGGATaGATGACAATTCATAAATGG +
Preference number: 4 (lower is better)
Translates to: VMAGFSCTVSEIARYRRLASGKG*MTIHKW
Trigger: CCATTTATGAATTGTCATCCATCCCTTGCCGGAAGC...CAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCTGCCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR CCA 90 bp GCAATCTCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGTCTGGCTATGGCTACTaGCCGCCACCATCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: AISLRVWSDPTAKIILASSGYGY*PPPSVH
Trigger: ATGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGA...CGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp CAGCACCATCTGTGCCACCAGAAATCAGTTTGCTATCATCTGCATTCCACACAACAAACACCTGGGGCATaGACATCTGGCTATGGCTAC +
Preference number: 4 (lower is better)
Translates to: QHHLCHQKSVCYHLHSTQQTPGA*TSGYGY
Trigger: GTAGCCATAGCCAGATGTCCATGCCCCAGGTGTTTG...TTGTGTGGAATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp TTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAGAGTTGGTTCTTACTaGTGCTGGCAACCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: FSCTVSEIARYRRLGLMDRVGSY*CWQPEF
Trigger: AAACTCTGGTTGCCAGCACCAGTAAGAACCAACTCT...GTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp AGGAAGAGTTTGCCTGTGTCAGTGCCAACGACAATCTTGTCATCAGCCACCCAGTGTTCTCTAGGCTCGTaGTGGTGTAAACGTGAATCA +
Preference number: 4 (lower is better)
Translates to: RKSLPVSVPTTILSSATQCSLGS*WCKRES
Trigger: TGATTCACGTTTACACCACCACGAGCCTAGAGAACA...CTGGGTGGCTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp TGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTGCAGAGGGTACTTCATaGCACGAATGGTTCCCACCG +
Preference number: 4 (lower is better)
Translates to: CLCIRLSMDAWLLPHFDCAEGTS*HEWFPP
Trigger: CGGTGGGAACCATTCGTGCCATGAAGTACCCTCTGC...ACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTCTAGAAGCAACTTTTaGTTGTTGCAACATTCCATG +
Preference number: 4 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHASRSNF*LLQHSM
Trigger: CATGGAATGTTGCAACAACCAAAAGTTGCTTCTAGA...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACTTGGTTTTGATATCTTaGATTTCTCGGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDLVLIS*ISRSSS
Trigger: AGATGAAGACCGAGAAATCCAAGATATCAAAACCAA...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp GCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTTGAACATTGGCTCCTTTCAGTCTaGGGCATTCTCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AFVCRWMLGCFHILTVEHWLLSV*GILWRR
Trigger: CCTCCTCCAGAGAATGCCCCAGACTGAAAGGAGCCA...ATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp ACGGCATCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGCTACCACGGCTGACATaGTCTCCCGCCAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: TASTKRPLIMHNIMVKTLLPRLT*SPAKQF
Trigger: GAACTGTTTGGCGGGAGATCATGTCAGCCGTGGTAG...CAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGATGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp TCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGGGGGAGCCGGCAAGGGATGGATaGCAATTCATAAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: SLRVWSDPTAKIILASGEPARDG*QFINGD
Trigger: ATCACCATTTATGAATTGTCATCCATCCCTTGCCGG...CTCCCCCGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp GAGAAGCTTAAACATCCCATTTCCAGTGACACACACCTGAGTGTTATCCTGTGGGACATCCAGGCTCTTTaGGCCATTGGTAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: EKLKHPISSDTHLSVILWDIQAL*AIGRFL
Trigger: AAGGAACCTACCAATGGCTCAAAGAGCCTGGATGTC...CCACAGGATAACACTCAGGTGTGTGTCACTGGAAATGGGATGTTTAAGCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGAACAGGCAAATCCCTTTaGATAGGCTGCAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: FFLHSLRDSEVPPIGTDGTGKSL*IGCNGK
Trigger: TTTGCCATTGCAGCCTATTCAAAGGGATTTGCCTGT...TCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp AGGAAGAGTTTGCCTGTGTCAGTGCCAACGACAATCTTGTCATCAGCCACCCAGCAAACCCTACTACAATaGAGTGTCCAGATGGATGAA +
Preference number: 4 (lower is better)
Translates to: RKSLPVSVPTTILSSATQQTLLQ*SVQMDE
Trigger: TTCATCCATCTGGACACTTCATTGTAGTAGGGTTTG...CTGGGTGGCTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp CATAGCTTGGGCAGTATATGCCAGTCCTGTCTTGAAAGTGGAAATTTCTTGTTAGCATCCTCTGGGACTTaGGCTGCAGCTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: HSLGSICQSCLESGNFLLASSGT*AAAPGT
Trigger: AGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGC...TAACAAGAAATTTCCACTTTCAAGACAGGACTGGCATATACTGCCCAAGCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR TCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTAGTCAAGCACAAACTTaGATTTCCCTAGTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCSQAQT*ISLVLD
Trigger: ATCAAGAACTAGGGAAATTCAAGTTTGTGCTTGACT...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR GCA 90 bp TTCATGAGGCGTAGTTTGTCAGCAAACCCTACTACAATGAAGTGTCCAGATGGACTTGGATCATTGCTCTaGGGGTCCACAGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: FMRRSLSANPTTMKCPDGLGSLL*GSTGIL
Trigger: CAGGATTCCTGTGGACCCGCAGAGCAATGATCCAAG...TCCATCTGGACACTTCATTGTAGTAGGGTTTGCTGACAAACTACGCCTCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp AGGTTCCTTGACCATTATGCTGGTCTCCCAACGCTGATCTCCAGATTCAAAGAGGTTGGTTCTTACTGGTaGTGGCAACCAGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RFLDHYAGLPTLISRFKEVGSYW*WQPEFP
Trigger: AGGAAACTCTGGTTGCCAGCACCAGTAAGAACCAAC...CTCTTTGAATCTGGAGATCAGCGTTGGGAGACCAGCATAATGGTCAAGGAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp AGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATTCATTGAATTCCTTCTaGAGAGGCAGAGGGTACTTC +
Preference number: 4 (lower is better)
Translates to: RFFLHSLRDSEVPPIGTDSLNSF*RGRGYF
Trigger: GAAGTACCCTCTGCCTCTGCAGAAGGAATTCAATGA...ATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp GCCTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCGCAACTTTTGGTTGTTaGAACATTCCATGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: AWLLVSSLSRSCFSYSSCATFGC*NIPCPA
Trigger: TGCAGGACATGGAATGTTGCAACAACCAAAAGTTGC...GCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR GCA 90 bp GCCTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCTTTCTCCTGCAGTTTTaGCTCGTAAAACTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: AWLLVSSLSRSCFSYSSCFLLQF*LVKLSQ
Trigger: CTGACTGAGTTTTACGAGGCAAAACTGCAGGAGAAA...GCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CCA 90 bp TGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTGCAATGGCAAACACCTaGGGCATGGACATCTGGCTA +
Preference number: 4 (lower is better)
Translates to: CLCIRLSMDAWLLPHFDCAMANT*GMDIWL
Trigger: TAGCCAGATGTCCATGCCCCAGGTGTTTGCCATTGC...ACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp CATAGCTTGGGCAGTATATGCCAGTCCTGTCTTGAAAGTGGAAATTTCTTGTTACCAGGGCCTGGCTCTTaGTCTCATCGTTATCCCGGA +
Preference number: 4 (lower is better)
Translates to: HSLGSICQSCLESGNFLLPGPGS*SHRYPG
Trigger: TCCGGGATAACGATGAGACCAAGAGCCAGGCCCTGG...TAACAAGAAATTTCCACTTTCAAGACAGGACTGGCATATACTGCCCAAGCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CCA 90 bp TGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTCAATCTTCAGGGCTATaGCTCCTTTCAGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CLCIRLSMDAWLLPHFDCQSSGL*LLSVWG
Trigger: GCCCCAGACTGAAAGGAGCCATAGCCCTGAAGATTG...ACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp ACCTCCATTGCTAAAGGAACACTCTCCGCATCCTCTAACAGAGTATTCTTTGAAAAAACATGCAGCGTCTaGGCTACCACGGCTGACATG +
Preference number: 4 (lower is better)
Translates to: TSIAKGTLSASSNRVFFEKTCSV*ATTADM
Trigger: CATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTT...TTCAAAGAATACTCTGTTAGAGGATGCGGAGAGTGTTCCTTTAGCAATGGAGGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp CGAGGTGCCCACAAACATCATGCGTCCAGAATGCGAGATGACAATGGCGGTGTACACACAGTGATTTCCTaGAGGAAATATAATGATCTG +
Preference number: 4 (lower is better)
Translates to: RGAHKHHASRMRDDNGGVHTVIS*RKYNDL
Trigger: CAGATCATTATATTTCCTTCAGGAAATCACTGTGTG...TACACCGCCATTGTCATCTCGCATTCTGGACGCATGATGTTTGTGGGCACCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp GGCAGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTACAATTCATAAATGGTaGTGGCAGGTTTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: GRFFLHSLRDSEVPPIGTTIHKW*WQVFLA
Trigger: TGCAAGAAAAACCTGCCATCACCATTTATGAATTGT...AGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR TCA 90 bp CTCTGTCTTTGTGATTCTGACTGCTCCAAGTATCTCCTAAAAGTGGAATCACACCCAGTGACACACACCTaGGTGTTATCCTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: LCLCDSDCSKYLLKVESHPVTHT*VLSCGL
Trigger: CAGTCCACAGGATAACACTCAGGTGTGTGTCACTGG...GTGTGATTCCACTTTTAGGAGATACTTGGAGCAGTCAGAATCACAAAGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp GCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTTGAACATGACATCCAGGCTCTTTaGGCCATTGGTAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: AFVCRWMLGCFHILTVEHDIQAL*AIGRFL
Trigger: AAGGAACCTACCAATGGCTCAAAGAGCCTGGATGTC...ATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp GCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTTGAACATCTGTCAGGGACATGGTaGTGCTGTAGAGTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: AFVCRWMLGCFHILTVEHLSGTW*CCRVGS
Trigger: AGAACCAACTCTACAGCATCACCATGTCCCTGACAG...ATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp TCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGGGGGAGGTACAGCAGCCAGAATaGACCTGGAATGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: SLRVWSDPTAKIILASGEVQQPE*TWNEFL
Trigger: CAAAAATTCATTCCAGGTTCATTCTGGCTGCTGTAC...CTCCCCCGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp GCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTTGAACATACTGACTTGGATCATTaGTCTGCGGGTCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: AFVCRWMLGCFHILTVEHTDLDH*SAGPQE
Trigger: TTCCTGTGGACCCGCAGAGCAATGATCCAAGTCAGT...ATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp CATCTTCTCAAACAGCAGAACTCTCCCTGGCCCAGCAGAACAGGCAAATCCCTTCACCAGAAATCAGTTTaGTATCATCTGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: HLLKQQNSPWPSRTGKSLHQKSV*YHLHST
Trigger: TGTGGAATGCAGATGATAGCAAACTGATTTCTGGTG...AAGGGATTTGCCTGTTCTGCTGGGCCAGGGAGAGTTCTGCTGTTTGAGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp CTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTGAGCTTGGGCAGTATATaGCAGTCCTGTCTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: LGLIVIPELFFILFLHPLSLGSI*QSCLES
Trigger: ACTTTCAAGACAGGACTGGCATATACTGCCCAAGCT...CAGAGGATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CCA 90 bp TTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGAATATTGTTGGCCACGTaGGATCGAAGACCAAAAACA +
Preference number: 4 (lower is better)
Translates to: FFLHSLRDSEVPPIGTDGILLAT*DRRPKT
Trigger: TGTTTTTGGTCTTCGATCCCACGTGGCCAACAATAT...TCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR CCA 90 bp ACGGCATCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGCTCCCCTCTGAAAGCTaGTTTGCTTCAGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: TASTKRPLIMHNIMVKTLLPSES*FASGFP
Trigger: AGGGAACCCTGAAGCAAACCAGCTTTCAGAGGGGAG...CAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGATGCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp AGAATTCCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCTGGGGCATGGACATCTaGCTATGGCTACTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RIPFLFRQGIVPLYRYTIWGMDI*LWLLAA
Trigger: GGCGGCCAGTAGCCATAGCCAGATGTCCATGCCCCA...GATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp GAGAAGCTTAAACATCCCATTTCCAGTGACACACACCTGAGTGTTATCCTGTGGAATTCCAAAGGCGGATaGATCGATCCAGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: EKLKHPISSDTHLSVILWNSKGG*IDPENR
Trigger: CCTGTTCTCTGGATCGATCCATCCGCCTTTGGAATT...CCACAGGATAACACTCAGGTGTGTGTCACTGGAAATGGGATGTTTAAGCTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp TTCATACACAGCACCATCTGTGCCACCAGAAATCAGTTTGCTATCATCTGCATTGGACCGGCATGGGCCTaGTACTCATTGAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: FIHSTICATRNQFAIICIGPAWA*YSLNSF
Trigger: GAAGGAATTCAATGAGTACCAGGCCCATGCCGGTCC...AATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGTATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTGGTTTTGATATCTTaGATTTCTCGGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCLVLIS*ISRSSS
Trigger: AGATGAAGACCGAGAAATCCAAGATATCAAAACCAA...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TTTTGGTTGTTGCAACATTCCATGTCCTGCAGTTCCCGGCTTTGCTTGTCTAGGTGTTTGAGCATAGCTTaGGCAGTATATGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: FWLLQHSMSCSSRLCLSRCLSIA*AVYASP
Trigger: AGGACTGGCATATACTGCCCAAGCTATGCTCAAACA...CCTAGACAAGCAAAGCCGGGAACTGCAGGACATGGAATGTTGCAACAACCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR TCA 90 bp TTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACCACACAGTGATTTCCTaGAGGAAATATAATGATCTG +
Preference number: 4 (lower is better)
Translates to: FSCTVSEIARYRRLGLMDHTVIS*RKYNDL
Trigger: CAGATCATTATATTTCCTTCAGGAAATCACTGTGTG...GTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR TCA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATACCGCCGATTGGGACTaGTGGACAAGGCCAACATGC +
Preference number: 4 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYTADWD*WTRPTC
Trigger: GCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGT...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp CTCTGTCTTTGTGATTCTGACTGCTCCAAGTATCTCCTAAAAGTGGAATCACACTGTTATCCTGTGGACTaGAGCTCACCTGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: LCLCDSDCSKYLLKVESHCYPVD*SSPGRQ
Trigger: CTGTCTACCAGGTGAGCTTCAGTCCACAGGATAACA...GTGTGATTCCACTTTTAGGAGATACTTGGAGCAGTCAGAATCACAAAGACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp ATGTTATTAAATACATTTGTAATGTTGTGCAGCCATTGCCACCAACTACCCCCATGGGGTTCTCCCCTCTaGAAGCTGGTTTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: MLLNTFVMLCSHCHQLPPWGSPL*KLVCFR
Trigger: CCTGAAGCAAACCAGCTTTCAGAGGGGAGAACCCCA...TGGGGGTAGTTGGTGGCAATGGCTGCACAACATTACAAATGTATTTAATAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTCAGGCTCCCCCTTGCTaGTCTCTGTCAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIQAPPC*SLSGTW
Trigger: CCATGTCCCTGACAGAGATCAGCAAGGGGGAGCCTG...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp TTCATGAGGCGTAGTTTGTCAGCAAACCCTACTACAATGAAGTGTCCAGATGGAAATCTGCAATCTCCTTaGGGGTGTGGTCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: FMRRSLSANPTTMKCPDGNLQSP*GCGLIQ
Trigger: TTGGATCAGACCACACCCTCAAGGAGATTGCAGATT...TCCATCTGGACACTTCATTGTAGTAGGGTTTGCTGACAAACTACGCCTCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp GAGCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTTGAGCTGCAGCTCCTGTCCTTTAGTCGGAGTTaGTACTCATTCTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: ELFFILFLHPLGLELQLLSFSRS*YSFSIF
Trigger: AAAAATGGAGAATGAGTATCAACTCCGACTAAAGGA...CAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR TCA 90 bp ACGGCATCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGAAGACATTGGGAGGTTaGAGGGATGAACAAGGCACG +
Preference number: 4 (lower is better)
Translates to: TASTKRPLIMHNIMVKTLKTLGG*RDEQGT
Trigger: CGTGCCTTGTTCATCCCTTCAACCTCCCAATGTCTT...CAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGATGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp GAGAAGCTTAAACATCCCATTTCCAGTGACACACACCTGAGTGTTATCCTGTGGGTTTGCCTGTGTCAGTaGCAACGACAATCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: EKLKHPISSDTHLSVILWVCLCQ*QRQSCH
Trigger: ATGACAAGATTGTCGTTGGCACTGACACAGGCAAAC...CCACAGGATAACACTCAGGTGTGTGTCACTGGAAATGGGATGTTTAAGCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp TCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGTACATACCTTCCTGCAGCCCCTaGCAACCACCACTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: STKRPLIMHNIMVKTLYIPSCSP*QPPLCL
Trigger: AAGACAGAGTGGTGGTTGGCAGGGGCTGCAGGAAGG...TATGTACAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGCTCATTCCCCCTTCCTaGAGCCCCTGCCAACCACCA +
Preference number: 4 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMLIPPS*SPCQPP
Trigger: TGGTGGTTGGCAGGGGCTGCAGGAAGGGGGAATGAG...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTGAATATGCCTCTTCTTaGTATTCCTTAAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFEYASS*YSLNSS
Trigger: GGAACTATTTAAGGAATACCAAGAAGAGGCATATTC...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CCA 90 bp TGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTATCTCCTTGAGGGTGTaGTCTGATCCAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: CLCIRLSMDAWLLPHFDCISLRV*SDPTAK
Trigger: CTTTGCTGTTGGATCAGACCACACCCTCAAGGAGAT...ACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp CTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATAAGGACTCCATTTCCTaGATGAACTTGTCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: LALGLIVIPELFFILFLHKDSIS*MNLSVS
Trigger: GCTAACAGACAAGTTCATCCAGGAAATGGAGTCCTT...ATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR CAA 72 bp AGCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTaGAGCTGCAGCTCCTGGTACTTCTCATATTCTAGA +
Preference number: 4 (lower is better)
Translates to: SCFSYSSCILWD*SCSSWYFSYSR
Trigger: TCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR TCA 90 bp ACGGCATCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGAGGCTCTCTGATTCCTaGATGACATCCAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TASTKRPLIMHNIMVKTLRLSDS*MTSRLF
Trigger: AAAGAGCCTGGATGTCATTCAGGAATCAGAGAGCCT...CAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGATGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp GCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTTGAACATCAGATGGATGAAGGCTaGTGGAATATGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: AFVCRWMLGCFHILTVEHQMDEG*WNMPLL
Trigger: AAGAAGAGGCATATTCCATCAGCCTTCATCCATCTG...ATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp ACGGCATCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGACTGCAGCAAACAGGTaGCCTCCATTGCTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TASTKRPLIMHNIMVKTLTAANR*PPLLKE
Trigger: TTCCTTTAGCAATGGAGGTCACCTGTTTGCTGCAGT...CAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGATGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp TGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTCTTGAGGGTGTGGTCTaGTCCAACAGCAAAGATAAT +
Preference number: 4 (lower is better)
Translates to: CLCIRLSMDAWLLPHFDCLEGVV*SNSKDN
Trigger: ATTATCTTTGCTGTTGGATCAGACCACACCCTCAAG...ACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGGGGAGGTTGAAGGGATaGACAAGGCACGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMGRLKG*TRHVAG
Trigger: GCCTGCTACGTGCCTTGTTCATCCCTTCAACCTCCC...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp ACGGCATCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGACACAGCACCATCTGTaGCACCAGAAATCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: TASTKRPLIMHNIMVKTLTQHHL*HQKSVC
Trigger: GCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGT...CAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGATGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp TGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTAGTAGAAGATATTGTTaGCCACGTGGGATCGAAGAC +
Preference number: 4 (lower is better)
Translates to: CLCIRLSMDAWLLPHFDCSRRYC*PRGIED
Trigger: GTCTTCGATCCCACGTGGCCAACAATATCTTCTACT...ACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp TTCATGAGGCGTAGTTTGTCAGCAAACCCTACTACAATGAAGTGTCCAGATGGAGCTTCCGGCAAGGGATaGATGACAATTCATAAATGG +
Preference number: 4 (lower is better)
Translates to: FMRRSLSANPTTMKCPDGASGKG*MTIHKW
Trigger: CCATTTATGAATTGTCATCCATCCCTTGCCGGAAGC...TCCATCTGGACACTTCATTGTAGTAGGGTTTGCTGACAAACTACGCCTCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp ACGGCATCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGCTGAGTGTTATCCTGTaGACTGAAGCTCACCTGGTA +
Preference number: 4 (lower is better)
Translates to: TASTKRPLIMHNIMVKTLLSVIL*TEAHLV
Trigger: TACCAGGTGAGCTTCAGTCCACAGGATAACACTCAG...CAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGATGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp AGAATTCCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCATGGACATCTGGCTATaGCTACTGGCCGCCACCATC +
Preference number: 4 (lower is better)
Translates to: RIPFLFRQGIVPLYRYTIMDIWL*LLAATI
Trigger: GATGGTGGCGGCCAGTAGCCATAGCCAGATGTCCAT...GATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGGAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATCAGCAGAACTCTCCCTaGCCCAGCAGAACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYQQNSP*PSRTGK
Trigger: TTTGCCTGTTCTGCTGGGCCAGGGAGAGTTCTGCTG...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp GCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTTGAACATTGTTCTCTAGGCTCGTaGTGGTGTAAACGTGAATCA +
Preference number: 4 (lower is better)
Translates to: AFVCRWMLGCFHILTVEHCSLGS*WCKRES
Trigger: TGATTCACGTTTACACCACCACGAGCCTAGAGAACA...ATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp ACCTCCATTGCTAAAGGAACACTCTCCGCATCCTCTAACAGAGTATTCTTTGAAATCTCCTTGAGGGTGTaGTCTGATCCAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TSIAKGTLSASSNRVFFEISLRV*SDPTAK
Trigger: CTTTGCTGTTGGATCAGACCACACCCTCAAGGAGAT...TTCAAAGAATACTCTGTTAGAGGATGCGGAGAGTGTTCCTTTAGCAATGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CAA 72 bp TCCTGGTACTTCTCATATTCTAGAAGCAACTTTTGGTaGTTGCAACATTCCATGTCCTGCAGTTCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: SWYFSYSRSNFW*LQHSMSCSSRL
Trigger: AAGCCGGGAACTGCAGGACATGGAATGTTGCAACAACCAAAAGTTGCTTCTAGAATATGAGAAGTACCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCTTTTGCTCTGGAGGTGACGTCTaGGCCAATAGGTATTTGGAG +
Preference number: 4 (lower is better)
Translates to: PFLFRQGIVPLYRYTIFCSGGDV*ANRYLE
Trigger: CTCCAAATACCTATTGGCTCAGACGTCACCTCCAGA...GCAAAAGATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGAACCAGAGTTTCCTCTaGGGGGCTGAAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMNQSFL*GAEAQA
Trigger: TGCCTGTGCTTCAGCCCCTCAGAGGAAACTCTGGTT...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp CTCTGTCTTTGTGATTCTGACTGCTCCAAGTATCTCCTAAAAGTGGAATCACACGTTTGCCTGTGTCAGTaGCAACGACAATCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LCLCDSDCSKYLLKVESHVCLCQ*QRQSCH
Trigger: ATGACAAGATTGTCGTTGGCACTGACACAGGCAAAC...GTGTGATTCCACTTTTAGGAGATACTTGGAGCAGTCAGAATCACAAAGACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTTGGTTCCCACCGAGGTaGCCACAAACATCATGCGTC +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIWFPPR*PQTSCV
Trigger: GACGCATGATGTTTGTGGGCACCTCGGTGGGAACCA...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp ACGGCATCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGTCTCTAGGCTCGTGGTaGTGTAAACGTGAATCACAT +
Preference number: 4 (lower is better)
Translates to: TASTKRPLIMHNIMVKTLSLGSW*CKRESH
Trigger: ATGTGATTCACGTTTACACCACCACGAGCCTAGAGA...CAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGATGCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp TTGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGAAGGACAATTACTTCATGGCACGAATaGTTCCCACCGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LTVEHRYYFMRRVNGRTITSWHE*FPPRCP
Trigger: TGGGCACCTCGGTGGGAACCATTCGTGCCATGAAGT...AATTGTCCTTCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTCATGGTATTGCCCCTaGGGTGGCCTTTTGTACCCT +
Preference number: 4 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYSWYCP*GGLLYP
Trigger: AGGGTACAAAAGGCCACCCCAGGGGCAATACCATGA...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp ATGTTATTAAATACATTTGTAATGTTGTGCAGCCATTGCCACCAACTACCCCCAACAAATGTGTACTCATaGTATTGCCCCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: MLLNTFVMLCSHCHQLPPTNVYS*YCPWGG
Trigger: GCCACCCCAGGGGCAATACCATGAGTACACATTTGT...TGGGGGTAGTTGGTGGCAATGGCTGCACAACATTACAAATGTATTTAATAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp CTCTGTCTTTGTGATTCTGACTGCTCCAAGTATCTCCTAAAAGTGGAATCACACCTGTCGATGGATGCTTaGTTGCTTCCACATTTTGAC +
Preference number: 4 (lower is better)
Translates to: LCLCDSDCSKYLLKVESHLSMDA*LLPHFD
Trigger: GTCAAAATGTGGAAGCAACCAAGCATCCATCGACAG...GTGTGATTCCACTTTTAGGAGATACTTGGAGCAGTCAGAATCACAAAGACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CAA 72 bp TTACTTTCTGTTTTTCCCACAGCCAGTAGACAAGATTaGACTCTGGAGGTGACGTCTGAGCCAATAGGTATT +
Preference number: 4 (lower is better)
Translates to: LLSVFPTASRQD*TLEVTSEPIGI
Trigger: AATACCTATTGGCTCAGACGTCACCTCCAGAGTCAAATCTTGTCTACTGGCTGTGGGAAAAACAGAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
3UTR CAA 72 bp GATATCTCTCGAAGGATCAAGGAATCTGCAATCTCCTaGAGGGTGTGGTCTGATCCAACAGCAAAGATAATT +
Preference number: 4 (lower is better)
Translates to: DISRRIKESAIS*RVWSDPTAKII
Trigger: AATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGAGATTGCAGATTCCTTGATCCTTCGAGAGATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTAAAACATGCAGCGTCTaGGCTACCACGGCTGACATG +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIKTCSV*ATTADM
Trigger: CATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTT...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp ATGTTATTAAATACATTTGTAATGTTGTGCAGCCATTGCCACCAACTACCCCCAGCCCTGACTCTTCTCTaGGCCTGGAATGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: MLLNTFVMLCSHCHQLPPALTLL*AWNEFL
Trigger: CAAAAATTCATTCCAGGCTCAGAGAAGAGTCAGGGC...TGGGGGTAGTTGGTGGCAATGGCTGCACAACATTACAAATGTATTTAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp GCAATCTCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGACAATTCATAAATGGTaGTGGCAGGTTTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: AISLRVWSDPTAKIILASTIHKW*WQVFLA
Trigger: TGCAAGAAAAACCTGCCATCACCATTTATGAATTGT...CGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGAGATTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGCTGGTCTCCCAACGCTaGTCTCCAGATTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMLVSQR*SPDSKR
Trigger: CCTCTTTGAATCTGGAGATCAGCGTTGGGAGACCAG...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp AGAATTCCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCACCGGTGATGGGTGCTaGGTGCAATGGATACATCAA +
Preference number: 4 (lower is better)
Translates to: RIPFLFRQGIVPLYRYTITGDGC*VQWIHQ
Trigger: TTGATGTATCCATTGCACTCAGCACCCATCACCGGT...GATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGGAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTGTAGCTGCAAGACTTaGGCACGCATTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYCSCKT*ARILSL
Trigger: GAGAGACAGAATGCGTGCTCAAGTCTTGCAGCTACA...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCTTTTGCAATCTGCAATCTCCTTaGGGGTGTGGTCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: PFLFRQGIVPLYRYTIFCNLQSP*GCGLIQ
Trigger: TTGGATCAGACCACACCCTCAAGGAGATTGCAGATT...GCAAAAGATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTGGGCCTGGTACTCATTaGATTCCTTCTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIGPGTH*IPSAEA
Trigger: TGCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCC...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGCTTGGATCATTGCTCTaGGGGTCCACAGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMLGSLL*GSTGIL
Trigger: CAGGATTCCTGTGGACCCGCAGAGCAATGATCCAAG...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp AGAATTCCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCATCATGCGTCCAGAATaGGAGATGACAATGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RIPFLFRQGIVPLYRYTIIMRPE*EMTMAV
Trigger: CACCGCCATTGTCATCTCGCATTCTGGACGCATGAT...GATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGGAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp TTGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGAAGGACAATTGTGTACTCATGGTATTaGCCCTGGGGTGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LTVEHRYYFMRRVNGRTIVYSWY*PWGGLL
Trigger: CAAAAGGCCACCCCAGGGGCAATACCATGAGTACAC...AATTGTCCTTCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp TTCATACACAGCACCATCTGTGCCACCAGAAATCAGTTTGCTATCATCTGCATTGAGCCAATAGGTATTTaGAGTCTGGAGAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FIHSTICATRNQFAIICIEPIGI*SLEKKP
Trigger: TGGCTTTTTCTCCAGACTCCAAATACCTATTGGCTC...AATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTGTGTATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGTCTGGCTATGGCTACTaGCCGCCACCATCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMSGYGY*PPPSVH
Trigger: ATGAACAGATGGTGGCGGCCAGTAGCCATAGCCAGA...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTCAAACACCTGGGGCATaGACATCTGGCTATGGCTAC +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIQTPGA*TSGYGY
Trigger: GTAGCCATAGCCAGATGTCCATGCCCCAGGTGTTTG...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATGGTTCTTACTGGTGCTaGCAACCAGAGTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYGSYWC*QPEFPL
Trigger: CAGAGGAAACTCTGGTTGCCAGCACCAGTAAGAACC...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCTTTTGCAATTCCAAAGGCGGATaGATCGATCCAGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: PFLFRQGIVPLYRYTIFCNSKGG*IDPENR
Trigger: CCTGTTCTCTGGATCGATCCATCCGCCTTTGGAATT...GCAAAAGATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGGGACCGGCATGGGCCTaGTACTCATTGAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMGPAWA*YSLNSF
Trigger: GAAGGAATTCAATGAGTACCAGGCCCATGCCGGTCC...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp TCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTTCTAGAAGCAACTTTTaGTTGTTGCAACATTCCATG +
Preference number: 4 (lower is better)
Translates to: SWSHRYPGAVFHTLPASSSRSNF*LLQHSM
Trigger: CATGGAATGTTGCAACAACCAAAAGTTGCTTCTAGA...AGAGGATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CCA 90 bp TTGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGAAGGACAATTGCTTTCGTTTCTCTCTaGGTCAGCAGACCACGCATG +
Preference number: 4 (lower is better)
Translates to: LTVEHRYYFMRRVNGRTIAFVSL*VSRPRM
Trigger: CATGCGTGGTCTGCTGACCCAGAGAGAAACGAAAGC...AATTGTCCTTCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CAA 72 bp TCTCTTTTTCTGTTCTTAAGACTGTTTGAGCATAGCTaGGGCAGTATATGCCAGTCCTGTCTTGAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: SLFLFLRLFEHS*GSICQSCLESG
Trigger: TCCACTTTCAAGACAGGACTGGCATATACTGCCCAAGCTATGCTCAAACAGTCTTAAGAACAGAAAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR TCA 90 bp ATGTTATTAAATACATTTGTAATGTTGTGCAGCCATTGCCACCAACTACCCCCACCGGCAAGGGATGGATaGCAATTCATAAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: MLLNTFVMLCSHCHQLPPPARDG*QFINGD
Trigger: ATCACCATTTATGAATTGTCATCCATCCCTTGCCGG...TGGGGGTAGTTGGTGGCAATGGCTGCACAACATTACAAATGTATTTAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp AGAATTCCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCTCTCTGATTCCTGAATaGCATCCAGGCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: RIPFLFRQGIVPLYRYTISLIPE*HPGSLS
Trigger: GCTCAAAGAGCCTGGATGTCATTCAGGAATCAGAGA...GATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGGAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATAAGTGTCCAGATGGATaGAGGCTGATGGAATATGCC +
Preference number: 4 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYKCPDG*RLMEYA
Trigger: GGCATATTCCATCAGCCTTCATCCATCTGGACACTT...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGCAATGGCGGTGTAGGTaGCATCAAACGCCGATATCT +
Preference number: 4 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMQWRCR*HQTPIS
Trigger: AGATATCGGCGTTTGATGTCACCTACACCGCCATTG...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp TGGTACTTCTCATATTCTAGAAGCAACTTTTGGTTGTTGCAACATTCCATGTCCAGCTCCAACATAACCTaGGCCTTTTCTTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: WYFSYSRSNFWLLQHSMSSSNIT*AFSSMS
Trigger: AGACATGGAAGAAAAGGCTCAGGTTATGTTGGAGCT...GGACATGGAATGTTGCAACAACCAAAAGTTGCTTCTAGAATATGAGAAGTACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR TCA 90 bp ATAGCTTGGGCAGTATATGCCAGTCCTGTCTTGAAAGTGGAAATTTCTTGTTATACTCCATTTCCTGGATaGACTTGTCTGTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: IAWAVYASPVLKVEISCYTPFPG*TCLLAP
Trigger: AGGAGCTAACAGACAAGTTCATCCAGGAAATGGAGT...ATAACAAGAAATTTCCACTTTCAAGACAGGACTGGCATATACTGCCCAAGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR GCA 90 bp TCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGTACATAGTTGGTTCTTACTGGTaGTGGCAACCAGAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: STKRPLIMHNIMVKTLYIVGSYW*WQPEFP
Trigger: AGGAAACTCTGGTTGCCAGCACCAGTAAGAACCAAC...TATGTACAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp CCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCTTTTGCAAGGATCAAGGAATCTaGAATCTCCTTGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PFLFRQGIVPLYRYTIFCKDQGI*NLLEGV
Trigger: CACACCCTCAAGGAGATTGCAGATTCCTTGATCCTT...GCAAAAGATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp ATGTTATTAAATACATTTGTAATGTTGTGCAGCCATTGCCACCAACTACCCCCATGGAGAACTGACTGGTaGAAATTCAATCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: MLLNTFVMLCSHCHQLPPWRTDW*KFNQAL
Trigger: GAGAGCCTGATTGAATTTCCACCAGTCAGTTCTCCA...TGGGGGTAGTTGGTGGCAATGGCTGCACAACATTACAAATGTATTTAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp TTGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGAAGGACAATTTTGAATAGGCTGCAATaGCAAACACCTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: LTVEHRYYFMRRVNGRTILNRLQ*QTPGAW
Trigger: CCATGCCCCAGGTGTTTGCCATTGCAGCCTATTCAA...AATTGTCCTTCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp CAGCACCATCTGTGCCACCAGAAATCAGTTTGCTATCATCTGCATTCCACACAAGAATATGCCTCTTCTTaGTATTCCTTAAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: QHHLCHQKSVCYHLHSTQEYASS*YSLNSS
Trigger: GGAACTATTTAAGGAATACCAAGAAGAGGCATATTC...TTGTGTGGAATGCAGATGATAGCAAACTGATTTCTGGTGGCACAGATGGTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTGTGATAGGACCGGCATaGGCCTGGTACTCATTGAAT +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIVIGPA*AWYSLN
Trigger: ATTCAATGAGTACCAGGCCCATGCCGGTCCTATCAC...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp CTCTGTCTTTGTGATTCTGACTGCTCCAAGTATCTCCTAAAAGTGGAATCACACACAATTCATAAATGGTaGTGGCAGGTTTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: LCLCDSDCSKYLLKVESHTIHKW*WQVFLA
Trigger: TGCAAGAAAAACCTGCCATCACCATTTATGAATTGT...GTGTGATTCCACTTTTAGGAGATACTTGGAGCAGTCAGAATCACAAAGACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp AGAATTCCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCACAGGCAAATCCCTTTaGATAGGCTGCAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: RIPFLFRQGIVPLYRYTITGKSL*IGCNGK
Trigger: TTTGCCATTGCAGCCTATTCAAAGGGATTTGCCTGT...GATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGGAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTTCCTGTTTGTCAGACTaGCTTGGATCATTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLISCLSD*LGSLLC
Trigger: GCAGAGCAATGATCCAAGTCAGTCTGACAAACAGGA...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATGAATCACATTTCCATTaGCTGCAGCAAACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYESHFH*LQQTGD
Trigger: GTCACCTGTTTGCTGCAGTCAATGGAAATGTGATTC...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp TTGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGAAGGACAATTTGCATTCCACACAATTaGGCGAATCTTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LTVEHRYYFMRRVNGRTICIPHN*ANLPCV
Trigger: CACACAGGGAAGATTCGCTCAATTGTGTGGAATGCA...AATTGTCCTTCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp CATAGCTTGGGCAGTATATGCCAGTCCTGTCTTGAAAGTGGAAATTTCTTGTTAATGCCAGTCCTGTCTTaGAAGTGGAAATTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: HSLGSICQSCLESGNFLLMPVLS*KWKFLV
Trigger: AACAAGAAATTTCCACTTTCAAGACAGGACTGGCAT...TAACAAGAAATTTCCACTTTCAAGACAGGACTGGCATATACTGCCCAAGCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR GCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTCACATTTCCATTGACTaGAGCAAACAGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIHISID*SKQVTS
Trigger: GGAGGTCACCTGTTTGCTGCAGTCAATGGAAATGTG...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTCGTCTGTCGATGGATaGTTGGTTGCTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYSSVDG*LVASTF
Trigger: AAATGTGGAAGCAACCAAGCATCCATCGACAGACGA...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp CCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCTTTTGCATATTGTTGGCCACGTaGGATCGAAGACCAAAAACA +
Preference number: 4 (lower is better)
Translates to: PFLFRQGIVPLYRYTIFCILLAT*DRRPKT
Trigger: TGTTTTTGGTCTTCGATCCCACGTGGCCAACAATAT...GCAAAAGATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp AGAATTCCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCGCTTCCGGCAAGGGATaGATGACAATTCATAAATGG +
Preference number: 4 (lower is better)
Translates to: RIPFLFRQGIVPLYRYTIASGKG*MTIHKW
Trigger: CCATTTATGAATTGTCATCCATCCCTTGCCGGAAGC...GATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGGAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp TTCTCATATTCTAGAAGCAACTTTTGGTTGTTGCAACATTCCATGTCCTGCAGTTTGAGCTGCAGCTCCTaGTACTTCTCATATTCTAGA +
Preference number: 4 (lower is better)
Translates to: FSYSRSNFWLLQHSMSCSLSCSS*YFSYSR
Trigger: TCTAGAATATGAGAAGTACCAGGAGCTGCAGCTCAA...ACTGCAGGACATGGAATGTTGCAACAACCAAAAGTTGCTTCTAGAATATGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428122.1
3UTR CAA 72 bp TTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTaGACTGTTGAACATAGATACTACTTTATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FVCRWMLGCFHI*TVEHRYYFMRR
Trigger: CCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CAA 72 bp CGTATATCATCAATGAGTAGATTCATGAGGCGTAGTTaGTCAGCAAACCCTACTACAATGAAGTGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: RISSMSRFMRRS*SANPTTMKCPD
Trigger: ATCTGGACACTTCATTGTAGTAGGGTTTGCTGACAAACTACGCCTCATGAATCTACTCATTGATGATATACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR TCA 90 bp TTGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGAAGGACAATTACATCCCATTTCCAGTaGCACACACCTGAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: LTVEHRYYFMRRVNGRTITSHFQ*HTPECY
Trigger: ATAACACTCAGGTGTGTGTCACTGGAAATGGGATGT...AATTGTCCTTCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTTTCAATCAGGCTCTCTaGTTCCTGAATGACATCCAG +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIFNQAL*FLNDIQ
Trigger: CTGGATGTCATTCAGGAATCAGAGAGCCTGATTGAA...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATCAAACCCTACTACAATaGAGTGTCCAGATGGATGAA +
Preference number: 4 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYQTLLQ*SVQMDE
Trigger: TTCATCCATCTGGACACTTCATTGTAGTAGGGTTTG...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGTCATTGAATTCCTTCTaGAGAGGCAGAGGGTACTTC +
Preference number: 4 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMSLNSF*RGRGYF
Trigger: GAAGTACCCTCTGCCTCTGCAGAAGGAATTCAATGA...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp TCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGTACATACGATGGATGCTTGGTTaGTTCCACATTTTGACTGTT +
Preference number: 4 (lower is better)
Translates to: STKRPLIMHNIMVKTLYIRWMLG*FHILTV
Trigger: AACAGTCAAAATGTGGAAGCAACCAAGCATCCATCG...TATGTACAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTAGAGTTGGTTCTTACTaGTGCTGGCAACCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIRVGSY*CWQPEF
Trigger: AAACTCTGGTTGCCAGCACCAGTAAGAACCAACTCT...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR TCA 90 bp CCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCTTTTGCCACACAGTGATTTCCTaGAGGAAATATAATGATCTG +
Preference number: 4 (lower is better)
Translates to: PFLFRQGIVPLYRYTIFCHTVIS*RKYNDL
Trigger: CAGATCATTATATTTCCTTCAGGAAATCACTGTGTG...GCAAAAGATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGGTGATGGGTGCTGAGTaGAATGGATACATCAAATAC +
Preference number: 4 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMVMGAE*NGYIKY
Trigger: GTATTTGATGTATCCATTGCACTCAGCACCCATCAC...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATAAGGCTGATGGAATATaGCTCTTCTTGGTATTCCTT +
Preference number: 4 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYKADGI*LFLVFL
Trigger: AAGGAATACCAAGAAGAGGCATATTCCATCAGCCTT...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp TCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGTACATAACCATCTTTTGCTTATaGATTCGTCTGTCGATGGAT +
Preference number: 4 (lower is better)
Translates to: STKRPLIMHNIMVKTLYITIFCL*IRLSMD
Trigger: ATCCATCGACAGACGAATGCATAAGCAAAAGATGGT...TATGTACAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTGAGCCAATAGGTATTTaGAGTCTGGAGAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIEPIGI*SLEKKP
Trigger: TGGCTTTTTCTCCAGACTCCAAATACCTATTGGCTC...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CAA 72 bp CATGTTATTAAATACATTTGTAATGTTGTGCAGCCATaGCCACCAACTACCCCCATAATCCTTTTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: HVIKYICNVVQP*PPTTPIILLSC
Trigger: ACAAGACAAAAGGATTATGGGGGTAGTTGGTGGCAATGGCTGCACAACATTACAAATGTATTTAATAACATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CAA 72 bp AAGGAACACTCTCCGCATCCTCTAACAGAGTATTCTTaGAAAGAACGTATATCATCAATGAGTAGATTCATG +
Preference number: 4 (lower is better)
Translates to: KEHSPHPLTEYS*KERISSMSRFM
Trigger: CATGAATCTACTCATTGATGATATACGTTCTTTCAAAGAATACTCTGTTAGAGGATGCGGAGAGTGTTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR GCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTCACCAGAAATCAGTTTaGTATCATCTGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIHQKSV*YHLHST
Trigger: TGTGGAATGCAGATGATAGCAAACTGATTTCTGGTG...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp TCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGTACATAAGATATACCATCTTTTaGTTATGCATTCGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: STKRPLIMHNIMVKTLYIRYTIF*LCIRLS
Trigger: CGACAGACGAATGCATAAGCAAAAGATGGTATATCT...TATGTACAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR GCA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTCATGTGGTAGCACATTaGAGAATTCCCTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIHVVAH*RIPFLF
Trigger: AAAAAGGAAGGGAATTCTGCAATGTGCTACCACATG...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
3UTR CAA 72 bp AGAATTCCCTTCCTTTTTAGGCAGGGTATTGTTCCATaGTATAGATATACCATCTTTTGCTTATGCATTCGT +
Preference number: 4 (lower is better)
Translates to: RIPFLFRQGIVP*YRYTIFCLCIR
Trigger: ACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGGAATTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CCA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGGAATATGCCTCTTCTTaGTATTCCTTAAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMEYASS*YSLNSS
Trigger: GGAACTATTTAAGGAATACCAAGAAGAGGCATATTC...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS GCA 90 bp GCCAGGTTCCTCTCCAGGTGCTCCCGCTGCCGGGTGTACTCCTGCTaGAGGTCTGTGTTCAGCCCTGCGATCTCCACCATGTCTGCTCGC +
Preference number: 5 (lower is better)
Translates to: ARFLSRCSRCRVYSC*RSVFSPAISTMSAR
Trigger: GCGAGCAGACATGGTGGAGATCGCAGGGCTGAACACAGACCTGCAGCAGGAGTACACCCGGCAGCGGGAGCACCTGGAGAGGAACCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 90 bp GTGGCCAGGTTCCTCTCCAGGTGCTCCCGCTGCCGGGTGTACTCCTaGTGCAGGTCTGTGTTCAGCCCTGCGATCTCCACCATGTCTGCT +
Preference number: 5 (lower is better)
Translates to: VARFLSRCSRCRVYS*CRSVFSPAISTMSA
Trigger: AGCAGACATGGTGGAGATCGCAGGGCTGAACACAGACCTGCAGCAGGAGTACACCCGGCAGCGGGAGCACCTGGAGAGGAACCTGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 90 bp ACCTTCTTCTTGAGAGTGGCCAGGTTCCTCTCCAGGTGCTCCCGCTaGCGGGTGTACTCCTGCTGCAGGTCTGTGTTCAGCCCTGCGATC +
Preference number: 5 (lower is better)
Translates to: TFFLRVARFLSRCSR*RVYSCCRSVFSPAI
Trigger: GATCGCAGGGCTGAACACAGACCTGCAGCAGGAGTACACCCGGCAGCGGGAGCACCTGGAGAGGAACCTGGCCACTCTCAAGAAGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 90 bp GAGGTTGAAGGGATGAACAAGGCACGTAGCAGGCAGGTGTGGGACTaGGTTCCTGGGGAGAGGGCCCTGCTCACCTTGGTGATAGGACCG +
Preference number: 5 (lower is better)
Translates to: EVEGMNKARSRQVWD*VPGERALLTLVIGP
Trigger: CGGTCCTATCACCAAGGTGAGCAGGGCCCTCTCCCCAGGAACCCAGTCCCACACCTGCCTGCTACGTGCCTTGTTCATCCCTTCAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACGCGAGGTACCGCCGATaGGGACTGATGGACAAGGCC +
Preference number: 5 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDARYRR*GLMDKA
Trigger: GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGC...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 90 bp GGAAGCCGAACTCCAGCGAGGGTGTGGAACCCTGTGACCTGCTCTTaGTCTTGGATCTGGTCTCTGAGGCGCTGGATTTCTAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: GSRTPARVWNPVTCS*SWIWSLRRWISRRC
Trigger: GCAGCGCCTAGAAATCCAGCGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGGGTTCCACACCCTCGCTGGAGTTCGGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCAACATGCCCGCGAGGTACCGCCGATaGGGACTGATGGACAAGGCC +
Preference number: 5 (lower is better)
Translates to: SEIARYRRLGLMDKANMPARYRR*GLMDKA
Trigger: GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGC...GGGCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR CAA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACGACCTGCTCTTGCTCTaGGATCTGGTCTCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDDLLLL*DLVSEA
Trigger: CGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGTC...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAGGCAAGAGAAAGAGGTaGCTGGGGTCAGTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGGKRKR*LGSVLQ
Trigger: CTGCAGCACTGACCCCAGCAACCTCTTTCTCTTGCC...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 90 bp ACCTCGGAGTTGGAGAGGGAAGGAAGCCGAACTCCAGCGAGGGTGTaGAACCCTGTGACCTGCTCTTGCTCTTGGATCTGGTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: TSELEREGSRTPARV*NPVTCSCSWIWSLR
Trigger: CCTCAGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGGGTTCCACACCCTCGCTGGAGTTCGGCTTCCTTCCCTCTCCAACTCCGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 90 bp CATTGGGAGGTTGAAGGGATGAACAAGGCACGTAGCAGGCAGGTGTaGGACTGGGTTCCTGGGGAGAGGGCCCTGCTCACCTTGGTGATA +
Preference number: 5 (lower is better)
Translates to: HWEVEGMNKARSRQV*DWVPGERALLTLVI
Trigger: TATCACCAAGGTGAGCAGGGCCCTCTCCCCAGGAACCCAGTCCCACACCTGCCTGCTACGTGCCTTGTTCATCCCTTCAACCTCCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGGTGCCAACGACAATCTaGTCATCAGCCACCCAGGTG +
Preference number: 5 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGVPTTI*SSATQV
Trigger: CACCTGGGTGGCTGATGACAAGATTGTCGTTGGCAC...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGTGCATCCTCTGGGACTaGAGCTGCAGCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQCILWD*SCSSWY
Trigger: GTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCA...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTTCCAGGGCCTGGCTCTaGGTCTCATCGTTATCCCGG +
Preference number: 5 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSSRAWL*VSSLSR
Trigger: CCGGGATAACGATGAGACCAAGAGCCAGGCCCTGGA...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACTGCAGCTCGCCCTCCTaGACCACCTTCTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDCSSPS*TTFFLR
Trigger: TCTCAAGAAGAAGGTGGTCAAGGAGGGCGAGCTGCA...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGATGCAGCTCGCCCTCCTaGACCACCTTCTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGCSSPS*TTFFLR
Trigger: TCTCAAGAAGAAGGTGGTCAAGGAGGGCGAGCTGCA...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 90 bp AGGGAAGGAAGCCGAACTCCAGCGAGGGTGTGGAACCCTGTGACCTaGTCTTGCTCTTGGATCTGGTCTCTGAGGCGCTGGATTTCTAGG +
Preference number: 5 (lower is better)
Translates to: REGSRTPARVWNPVT*SCSWIWSLRRWISR
Trigger: CCTAGAAATCCAGCGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGGGTTCCACACCCTCGCTGGAGTTCGGCTTCCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTCCTCTGAAAGCTGGTTaGCTTCAGGGTTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAPLKAG*LQGSLS
Trigger: GCTGAGGGAACCCTGAAGCAAACCAGCTTTCAGAGG...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGCCTCTGAAAGCTGGTTaGCTTCAGGGTTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLPLKAG*LQGSLS
Trigger: GCTGAGGGAACCCTGAAGCAAACCAGCTTTCAGAGG...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGATGGGCCTGGTACTCATaGAATTCCTTCTGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGWAWYS*NSFCRG
Trigger: GCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCCA...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTTGCATCCTCTGGGACTaGAGCTGCAGCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSCILWD*SCSSWY
Trigger: GTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCA...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACATGCCTGTTTCTCCCTaGAGCCGCAGGTTTGATTCC +
Preference number: 5 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDMPVSP*SRRFDS
Trigger: GGAATCAAACCTGCGGCTCAAGGGAGAAACAGGCAT...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGCTCTCGCTTGAGGCCTaGGATGTCCTTCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQLSLEA*DVLLQR
Trigger: TCTCTGGAGAAGGACATCCAAGGCCTCAAGCGAGAG...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCCTCTCGCTTGAGGCCTaGGATGTCCTTCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCLSLEA*DVLLQR
Trigger: TCTCTGGAGAAGGACATCCAAGGCCTCAAGCGAGAG...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGTCCTGGATCTCTCGCTaGAGGCCTTGGATGTCCTTC +
Preference number: 5 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLSWISR*RPWMSF
Trigger: GAAGGACATCCAAGGCCTCAAGCGAGAGATCCAGGA...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGACCTGCTCTTGCTCTaGGATCTGGTCTCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLDLLLL*DLVSEA
Trigger: CGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGTC...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACCCCTGTGACCTGCTCTaGCTCTTGGATCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDPCDLL*LLDLVS
Trigger: AGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGGG...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGAAGTCTACCTCGGAGTaGGAGAGGGAAGGAAGCCGA +
Preference number: 5 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLKSTSE*EREGSR
Trigger: TCGGCTTCCTTCCCTCTCCAACTCCGAGGTAGACTT...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAACCGCAAGTCTGGCTaGGGGACAGACATGCTGTGT +
Preference number: 5 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDNRKSG*GTDMLC
Trigger: ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTT...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAGGCAAGAGAAAGAGGTaGCTGGGGTCAGTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRGKRKR*LGSVLQ
Trigger: CTGCAGCACTGACCCCAGCAACCTCTTTCTCTTGCC...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 90 bp CGAACTCCAGCGAGGGTGTGGAACCCTGTGACCTGCTCTTGCTCTTaGATCTGGTCTCTGAGGCGCTGGATTTCTAGGCGCTGCATTTCA +
Preference number: 5 (lower is better)
Translates to: RTPARVWNPVTCSCS*IWSLRRWISRRCIS
Trigger: TGAAATGCAGCGCCTAGAAATCCAGCGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGGGTTCCACACCCTCGCTGGAGTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGTGCCAACGACAATCTaGTCATCAGCCACCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLVPTTI*SSATQV
Trigger: CACCTGGGTGGCTGATGACAAGATTGTCGTTGGCAC...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGGTTTGTCAGACTGACTaGGATCATTGCTCTGCGGGT +
Preference number: 5 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGVCQTD*DHCSAG
Trigger: ACCCGCAGAGCAATGATCCAAGTCAGTCTGACAAAC...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGGGTGATGCTGTAGAGTaGGTTCTTACTGGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQGDAVE*VLTGAG
Trigger: GCCAGCACCAGTAAGAACCAACTCTACAGCATCACC...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGTGGGCCTGGTACTCATaGAATTCCTTCTGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQWAWYS*NSFCRG
Trigger: GCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCCA...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAAGGTAAGCAACATCTaGGTGATAGGACCGGCATGG +
Preference number: 5 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDKVSNI*VIGPAW
Trigger: CCATGCCGGTCCTATCACCAAGATGTTGCTTACCTT...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAAAGGTAAGCAACATCTaGGTGATAGGACCGGCATGG +
Preference number: 5 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGKVSNI*VIGPAW
Trigger: CCATGCCGGTCCTATCACCAAGATGTTGCTTACCTT...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TCAGCTCCTCCAGGGCCTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTTGCATCCTCTGGGACTaGAGCTGCAGCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: SAPPGPGSWSHRYPGAVFCILWD*SCSSWY
Trigger: GTACCAGGAGCTGCAGCTCAAGTCCCAGAGGATGCA...AAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAGGCCCTGGAGGAGCTGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CAA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTTCCAGGGCCTGGCTCTaGGTCTCATCGTTATCCCGG +
Preference number: 5 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFSRAWL*VSSLSR
Trigger: CCGGGATAACGATGAGACCAAGAGCCAGGCCCTGGA...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGTTGACCACCTTCTTCTaGAGAGTGGCCAGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLLTTFF*RVARFL
Trigger: GAGGAACCTGGCCACTCTCAAGAAGAAGGTGGTCAA...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTGACCACCTTCTTCTaGAGAGTGGCCAGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCLTTFF*RVARFL
Trigger: GAGGAACCTGGCCACTCTCAAGAAGAAGGTGGTCAA...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGATGTGGTCGGACTTTCTaGGTCAGTTTCAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGCGRTF*VSFRAA
Trigger: AGCAGCTCTGAAACTGACCAAGAAAGTCCGACCACA...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACCTCCCAGTTTCTTCTaGCTCATTCAACCTTGCGGT +
Preference number: 5 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGPPSFF*LIQPCG
Trigger: ACCGCAAGGTTGAATGAGCAAGAAGAAACTGGGAGG...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTCCCTGTGACCTGCTCTaGCTCTTGGATCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLPCDLL*LLDLVS
Trigger: AGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGGG...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTAAGTCTACCTCGGAGTaGGAGAGGGAAGGAAGCCGA +
Preference number: 5 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHAKSTSE*EREGSR
Trigger: TCGGCTTCCTTCCCTCTCCAACTCCGAGGTAGACTT...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGACCAGAGGGGGTCAGTaGGTCTTCACCTCTAAGTCT +
Preference number: 5 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLTRGGQ*VFTSKS
Trigger: AGACTTAGAGGTGAAGACCAACTGACCCCCTCTGGT...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAAACCGCAAGTCTGGCTaGGGGACAGACATGCTGTGT +
Preference number: 5 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTNRKSG*GTDMLC
Trigger: ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTT...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 90 bp CCAGCGAGGGTGTGGAACCCTGTGACCTGCTCTTGCTCTTGGATCTaGTCTCTGAGGCGCTGGATTTCTAGGCGCTGCATTTCAATGATC +
Preference number: 5 (lower is better)
Translates to: PARVWNPVTCSCSWI*SLRRWISRRCISMI
Trigger: GATCATTGAAATGCAGCGCCTAGAAATCCAGCGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGGGTTCCACACCCTCGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 90 bp GCTTGGGGACAGACATGCTGTGTTTCTTCTGGCTGTGGCTGGAGATaGCTCACCAGAGGGGGTCAGTTGGTCTTCACCTCTAAGTCTACC +
Preference number: 5 (lower is better)
Translates to: AWGQTCCVSSGCGWR*LTRGGQLVFTSKST
Trigger: GGTAGACTTAGAGGTGAAGACCAACTGACCCCCTCTGGTGAGCCATCTCCAGCCACAGCCAGAAGAAACACAGCATGTCTGTCCCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACGATGGCAGGTTTTTCTaGCACAGTCTCAGAGATAGC +
Preference number: 5 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDDGRFF*HSLRDS
Trigger: GCTATCTCTGAGACTGTGCAAGAAAAACCTGCCATC...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGCCAGTAGACAAGATTaGACTCTGGAGGTGACGTCT +
Preference number: 5 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLASRQD*TLEVTS
Trigger: AGACGTCACCTCCAGAGTCAAATCTTGTCTACTGGC...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGCCATTGGTAGGTTCCTaGACCATTATGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: CWGQCCRDHTDSNRKSGLPLVGS*TIMLVS
Trigger: GGAGACCAGCATAATGGTCAAGGAACCTACCAATGG...CAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGGGTGATGCTGTAGAGTaGGTTCTTACTGGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVGDAVE*VLTGAG
Trigger: GCCAGCACCAGTAAGAACCAACTCTACAGCATCACC...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGTGGCTATAAGGGGTTaGCGGATGCAGGTAGCTAGA +
Preference number: 5 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLVAIRG*RMQVAR
Trigger: TCTAGCTACCTGCATCCGCAAACCCCTTATAGCCAC...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGCACGAATGGTTCCCACCGAGGTGCCCACAAACATCATGCGTCCAGAATGCGAGTGGCTATAAGGGGTTaGCGGATGCAGGTAGCTAGA +
Preference number: 5 (lower is better)
Translates to: GTNGSHRGAHKHHASRMRVAIRG*RMQVAR
Trigger: TCTAGCTACCTGCATCCGCAAACCCCTTATAGCCAC...TCGCATTCTGGACGCATGATGTTTGTGGGCACCTCGGTGGGAACCATTCGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGTGGCTATAAGGGGTTaGCGGATGCAGGTAGCTAGA +
Preference number: 5 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSVAIRG*RMQVAR
Trigger: TCTAGCTACCTGCATCCGCAAACCCCTTATAGCCAC...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGTGTGTCCTTTCAGGCTaGAGATGTTCTCTAGGCTCG +
Preference number: 5 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLCVLSG*RCSLGS
Trigger: CGAGCCTAGAGAACATCTCAAGCCTGAAAGGACACA...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCGAATCTGCAATCTCCTaGAGGGTGTGGTCTGATCCA +
Preference number: 5 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCESAIS*RVWSDP
Trigger: TGGATCAGACCACACCCTCAAGGAGATTGCAGATTC...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGAATCTGCAATCTCCTaGAGGGTGTGGTCTGATCCA +
Preference number: 5 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLESAIS*RVWSDP
Trigger: TGGATCAGACCACACCCTCAAGGAGATTGCAGATTC...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGAGTTCCCGGCTTTGCTaGTCTAGGAGGTCTTCTATG +
Preference number: 5 (lower is better)
Translates to: EVAGVSAAGTIQTPTASLSSRLC*SRRSSM
Trigger: CATAGAAGACCTCCTAGACAAGCAAAGCCGGGAACT...CAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGTCCTCAATCTGCTTCTaGGTCTCTTCAAACTCCCGC +
Preference number: 5 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQSSICF*VSSNSR
Trigger: GCGGGAGTTTGAAGAGACCAAGAAGCAGATTGAGGA...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTATGCCTGTTTCTCCCTaGAGCCGCAGGTTTGATTCC +
Preference number: 5 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHAMPVSP*SRRFDS
Trigger: GGAATCAAACCTGCGGCTCAAGGGAGAAACAGGCAT...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAGGGTCTCGATGTCATaGGTTCGTTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGRVSMS*VRSSIS
Trigger: GGAGATTGAAGAACGAACCAATGACATCGAGACCCT...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGTTCAAGGTCATAGACTaGGGACCGAGTGAACTTCAG +
Preference number: 5 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGFKVID*GPSELQ
Trigger: CTGAAGTTCACTCGGTCCCAAGTCTATGACCTTGAA...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGTGTGGTCGGACTTTCTaGGTCAGTTTCAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQCGRTF*VSFRAA
Trigger: AGCAGCTCTGAAACTGACCAAGAAAGTCCGACCACA...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTACCAGAGGGGGTCAGTaGGTCTTCACCTCTAAGTCT +
Preference number: 5 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHATRGGQ*VFTSKS
Trigger: AGACTTAGAGGTGAAGACCAACTGACCCCCTCTGGT...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 90 bp TTTCTTCTGGCTGTGGCTGGAGATGGCTCACCAGAGGGGGTCAGTTaGTCTTCACCTCTAAGTCTACCTCGGAGTTGGAGAGGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: FLLAVAGDGSPEGVS*SSPLSLPRSWRGKE
Trigger: TTCCTTCCCTCTCCAACTCCGAGGTAGACTTAGAGGTGAAGACCAACTGACCCCCTCTGGTGAGCCATCTCCAGCCACAGCCAGAAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp CAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACGATGGCAGGTTTTTCTaGCACAGTCTCAGAGATAGC +
Preference number: 5 (lower is better)
Translates to: QCCRDHTDSNRKSGLGTDDGRFF*HSLRDS
Trigger: GCTATCTCTGAGACTGTGCAAGAAAAACCTGCCATC...GTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAGCCAGTAGACAAGATTaGACTCTGGAGGTGACGTCT +
Preference number: 5 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTASRQD*TLEVTS
Trigger: AGACGTCACCTCCAGAGTCAAATCTTGTCTACTGGC...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCAACATGCCCCCATTGGTAGGTTCCTaGACCATTATGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SEIARYRRLGLMDKANMPPLVGS*TIMLVS
Trigger: GGAGACCAGCATAATGGTCAAGGAACCTACCAATGG...GGGCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTTGTGTCCTTTCAGGCTaGAGATGTTCTCTAGGCTCG +
Preference number: 5 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLCVLSG*RCSLGS
Trigger: CGAGCCTAGAGAACATCTCAAGCCTGAAAGGACACA...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCTGTGTCCTTTCAGGCTaGAGATGTTCTCTAGGCTCG +
Preference number: 5 (lower is better)
Translates to: CTVSEIARYRRLGLMDKACVLSG*RCSLGS
Trigger: CGAGCCTAGAGAACATCTCAAGCCTGAAAGGACACA...GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACCCACCAGAAATCAGTTaGCTATCATCTGCATTCCAC +
Preference number: 5 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDPPEIS*LSSAFH
Trigger: GTGGAATGCAGATGATAGCAAACTGATTTCTGGTGG...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTCCTCAATCTGCTTCTaGGTCTCTTCAAACTCCCGC +
Preference number: 5 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHASSICF*VSSNSR
Trigger: GCGGGAGTTTGAAGAGACCAAGAAGCAGATTGAGGA...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCAGACTTAATGACTCCTaGCAGCTTCATCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCRLNDS*QLHLLS
Trigger: GGAGAGCAGATGAAGCTGCAAGGAGTCATTAAGTCT...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTTCCTGGATCTCTCGCTaGAGGCCTTGGATGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFSWISR*RPWMSF
Trigger: GAAGGACATCCAAGGCCTCAAGCGAGAGATCCAGGA...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCGATGGCAGGTTTTTCTaGCACAGTCTCAGAGATAGC +
Preference number: 5 (lower is better)
Translates to: CTVSEIARYRRLGLMDKADGRFF*HSLRDS
Trigger: GCTATCTCTGAGACTGTGCAAGAAAAACCTGCCATC...GGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR CAA 90 bp TCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAAGGCCAACATGCCCGATGGCAGGTTTTTCTaGCACAGTCTCAGAGATAGC +
Preference number: 5 (lower is better)
Translates to: SEIARYRRLGLMDKANMPDGRFF*HSLRDS
Trigger: GCTATCTCTGAGACTGTGCAAGAAAAACCTGCCATC...GGGCATGTTGGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR CAA 90 bp TGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGAAATTATTAAGAACTTaGCGCTTCCGGCAAGGGATG +
Preference number: 5 (lower is better)
Translates to: WGQCCRDHTDSNRKSGLGKLLRT*RFRQGM
Trigger: CATCCCTTGCCGGAAGCGCAAAGTTCTTAATAATTT...CCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACCCTCTGAAAGCTGGTTaGCTTCAGGGTTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: FSCTVSEIARYRRLGLMDPLKAG*LQGSLS
Trigger: GCTGAGGGAACCCTGAAGCAAACCAGCTTTCAGAGG...GTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGAGGCTCTTTGAGCCATaGGTAGGTTCCTTGACCATT +
Preference number: 5 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVRLFEP*VGSLTI
Trigger: AATGGTCAAGGAACCTACCAATGGCTCAAAGAGCCT...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTGTTTGTCAGACTGACTaGGATCATTGCTCTGCGGGT +
Preference number: 5 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCVCQTD*DHCSAG
Trigger: ACCCGCAGAGCAATGATCCAAGTCAGTCTGACAAAC...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCACAGCAAAGATAATTTaGGCATCGGGGGAGACAGTA +
Preference number: 5 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCTAKII*ASGETV
Trigger: TACTGTCTCCCCCGATGCCAAAATTATCTTTGCTGT...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TTTGGTTGTTGCAACATTCCATGTCCTGCAGTTCCCGGCTTTGCTTGTCTAGGATCCAGGGCCTGGCTCTaGGTCTCATCGTTATCCCGG +
Preference number: 5 (lower is better)
Translates to: FGCCNIPCPAVPGFACLGSRAWL*VSSLSR
Trigger: CCGGGATAACGATGAGACCAAGAGCCAGGCCCTGGA...TCCTAGACAAGCAAAGCCGGGAACTGCAGGACATGGAATGTTGCAACAACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CAA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTAGGGTCTCGATGTCATaGGTTCGTTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLRVSMS*VRSSIS
Trigger: GGAGATTGAAGAACGAACCAATGACATCGAGACCCT...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAAGACTTAATGACTCCTaGCAGCTTCATCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRRLNDS*QLHLLS
Trigger: GGAGAGCAGATGAAGCTGCAAGGAGTCATTAAGTCT...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACTCTGTTTTAAACCTTTaGACCAGCGCTTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: GSVLQGPYRLQPQVWLGDSVLNL*TSASKS
Trigger: AGACTTGGAAGCGCTGGTCAAAAGGTTTAAAACAGA...GTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTTTCAAGGTCATAGACTaGGGACCGAGTGAACTTCAG +
Preference number: 5 (lower is better)
Translates to: LLGSVLQGPYRLQPQVWLFKVID*GPSELQ
Trigger: CTGAAGTTCACTCGGTCCCAAGTCTATGACCTTGAA...AAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS TCA 90 bp TCCCAGTTTCTTCTTGCTCATTCAACCTTGCGGTGGGAGCTGTGCTaGGCATGTCCCTGCTGGGTTCTGTCTCTGAAACTTCTTGTGGTC +
Preference number: 5 (lower is better)
Translates to: SQFLLAHSTLRWELC*ACPCWVLSLKLLVV
Trigger: GACCACAAGAAGTTTCAGAGACAGAACCCAGCAGGGACATGCTCAGCACAGCTCCCACCGCAAGGTTGAATGAGCAAGAAGAAACTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS TCA 90 bp GTGGGATCGAAGACCAAAAACATGCAGCGTCTGAGCTACCACGGCTaGCATGATCTCCCGCCAAACAGTTCTGTAGGGATCCTAAGCAAC +
Preference number: 5 (lower is better)
Translates to: VGSKTKNMQRLSYHG*HDLPPNSSVGILSN
Trigger: GTTGCTTAGGATCCCTACAGAACTGTTTGGCGGGAGATCATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTTTGGTCTTCGATCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529956.5
CDS GCA 90 bp CTGCATTTCAATGATCCTCCCAGTTTCTTCTTGCTCATTCAACCTTaGGGTGGGAGCTGTGCTGAGCATGTCCCTGCTGGGTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: LHFNDPPSFFLLIQP*GGSCAEHVPAGFCL
Trigger: GAGACAGAACCCAGCAGGGACATGCTCAGCACAGCTCCCACCGCAAGGTTGAATGAGCAAGAAGAAACTGGGAGGATCATTGAAATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 90 bp TCCACAGTCAAATACTACCCTTTGGCTTGGGAACCGTACACAAACTaGACATGGCCAAGCCTAGAAGCAAGAGAGTGCTTGGGGCGTGTG +
Preference number: 5 (lower is better)
Translates to: STVKYYPLAWEPYTN*TWPSLEARECLGRV
Trigger: CACACGCCCCAAGCACTCTCTTGCTTCTAGGCTTGGCCATGTGCAGTTTGTGTACGGTTCCCAAGCCAAAGGGTAGTATTTGACTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534615.1
CDS-3UTR CAA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTCCATTGGTAGGTTCCTaGACCATTATGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFPLVGS*TIMLVS
Trigger: GGAGACCAGCATAATGGTCAAGGAACCTACCAATGG...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTAGGCTCTTTGAGCCATaGGTAGGTTCCTTGACCATT +
Preference number: 5 (lower is better)
Translates to: RDHTDSNRKSGLGTDMLCRLFEP*VGSLTI
Trigger: AATGGTCAAGGAACCTACCAATGGCTCAAAGAGCCT...ACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAAACAGGCAAATCCCTTaGAATAGGCTGCAATGGCAA +
Preference number: 5 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTNRQIP*NRLQWQ
Trigger: TTGCCATTGCAGCCTATTCAAAGGGATTTGCCTGTT...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATTCATGAGGCGTAGTTaGTCAGCAAACCCTACTACA +
Preference number: 5 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTFMRRS*SANPTT
Trigger: TGTAGTAGGGTTTGCTGACAAACTACGCCTCATGAA...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTCCACCAGAAATCAGTTaGCTATCATCTGCATTCCAC +
Preference number: 5 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSPPEIS*LSSAFH
Trigger: GTGGAATGCAGATGATAGCAAACTGATTTCTGGTGG...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACAACAGCAAAGATAATTTaGGCATCGGGGGAGACAGTA +
Preference number: 5 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTTAKII*ASGETV
Trigger: TACTGTCTCCCCCGATGCCAAAATTATCTTTGCTGT...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTAGTTCCCGGCTTTGCTaGTCTAGGAGGTCTTCTATG +
Preference number: 5 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFSSRLC*SRRSSM
Trigger: CATAGAAGACCTCCTAGACAAGCAAAGCCGGGAACT...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGATGTTCAGCTCCAGTaGAGTGTTCTGCTTATGGAA +
Preference number: 5 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSDVQLQ*SVLLME
Trigger: TTCCATAAGCAGAACACTCAACTGGAGCTGAACATC...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTCCTCCCAGTTTCTTCTaGCTCATTCAACCTTGCGGT +
Preference number: 5 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFPPSFF*LIQPCG
Trigger: ACCGCAAGGTTGAATGAGCAAGAAGAAACTGGGAGG...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS TCA 90 bp ATATTGTTGGCCACGTGGGATCGAAGACCAAAAACATGCAGCGTCTaGGCTACCACGGCTGACATGATCTCCCGCCAAACAGTTCTTTCG +
Preference number: 5 (lower is better)
Translates to: ILLATWDRRPKTCSV*ATTADMISRQTVLS
Trigger: CGAAAGAACTGTTTGGCGGGAGATCATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTTTGGTCTTCGATCCCACGTGGCCAACAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000533339.1
CDS TCA 90 bp ATATTGTTGGCCACGTGGGATCGAAGACCAAAAACATGCAGCGTCTaGGCTACCACGGCTGACATGATCTCCCGCCAAACAGTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: ILLATWDRRPKTCSV*ATTADMISRQTVLL
Trigger: AAGCAGAACTGTTTGGCGGGAGATCATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTTTGGTCTTCGATCCCACGTGGCCAACAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525227.5
ENST00000528956.5
ENST00000610710.4
CDS CCA 90 bp CCCTGCTGGGTTCTGTCTCTGAAACTTCTTGTGGTCGGACTTTCTTaGTCAGTTTCAGAGCTGCTTCAAGGTCATAGACTTGGGACCGAG +
Preference number: 5 (lower is better)
Translates to: PCWVLSLKLLVVGLS*SVSELLQGHRLGTE
Trigger: CTCGGTCCCAAGTCTATGACCTTGAAGCAGCTCTGAAACTGACCAAGAAAGTCCGACCACAAGAAGTTTCAGAGACAGAACCCAGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 90 bp AACCCTGTGACCTGCTCTTGCTCTTGGATCTGGTCTCTGAGGCGCTaGATTTCTAGGCGCTGCATTTCAATGATCCTCCCAGTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: NPVTCSCSWIWSLRR*ISRRCISMILPVSS
Trigger: AGAAGAAACTGGGAGGATCATTGAAATGCAGCGCCTAGAAATCCAGCGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGCAGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTAGGCTCTTTGAGCCATaGGTAGGTTCCTTGACCATT +
Preference number: 5 (lower is better)
Translates to: GRFFLHSLRDSEVPPIGTRLFEP*VGSLTI
Trigger: AATGGTCAAGGAACCTACCAATGGCTCAAAGAGCCT...AGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp CGGATGCAGGTAGCTAGACCGGTGATGGGTGCTGAGTGCAATGGATACATCAAAGTTTGTCAGACTGACTaGGATCATTGCTCTGCGGGT +
Preference number: 5 (lower is better)
Translates to: RMQVARPVMGAECNGYIKVCQTD*DHCSAG
Trigger: ACCCGCAGAGCAATGATCCAAGTCAGTCTGACAAAC...TTTGATGTATCCATTGCACTCAGCACCCATCACCGGTCTAGCTACCTGCATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp GCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCATAGTTCCAGGGTGTTaGTTTCATAATTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: AAGTIQTPTASLAWGQTCIVPGC*FHNSKG
Trigger: GCCTTTGGAATTATGAAACAAACACCCTGGAACTAT...GCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGGAAGAGTTTGCCTGTGTCAGTGCCAACGACAATCTTGTCATCAGCCACCCAGGAATCTGCAATCTCCTaGAGGGTGTGGTCTGATCCA +
Preference number: 5 (lower is better)
Translates to: RKSLPVSVPTTILSSATQESAIS*RVWSDP
Trigger: TGGATCAGACCACACCCTCAAGGAGATTGCAGATTC...CTGGGTGGCTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp GTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTATTTCCTGGATGAACTaGTCTGTTAGCTCCTTAATC +
Preference number: 5 (lower is better)
Translates to: VAGVSAAGTIQTPTASLAISWMN*SVSSLI
Trigger: GATTAAGGAGCTAACAGACAAGTTCATCCAGGAAAT...AGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTAGAAGCAACTTTTGGTaGTTGCAACATTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHARSNFW*LQHSMS
Trigger: GGACATGGAATGTTGCAACAACCAAAAGTTGCTTCT...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTAGAAGCAACTTTTGGTaGTTGCAACATTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSRSNFW*LQHSMS
Trigger: GGACATGGAATGTTGCAACAACCAAAAGTTGCTTCT...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTTTTTCTCCTGCAGTTTaGCCTCGTAAAACTCAGTCA +
Preference number: 5 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSFSPAV*PRKTQS
Trigger: TGACTGAGTTTTACGAGGCAAAACTGCAGGAGAAAA...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATTTTCTCCTGCAGTTTaGCCTCGTAAAACTCAGTCA +
Preference number: 5 (lower is better)
Translates to: SAAGTIQTPTASLAWGQTFSPAV*PRKTQS
Trigger: TGACTGAGTTTTACGAGGCAAAACTGCAGGAGAAAA...TGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGCTTGGTTTTGATATCTaGGATTTCTCGGTCTTCATC +
Preference number: 5 (lower is better)
Translates to: VSAAGTIQTPTASLAWGQLGFDI*DFSVFI
Trigger: GATGAAGACCGAGAAATCCAAGATATCAAAACCAAG...CTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGATTCTCATACTTGGTTTaGATATCTTGGATTTCTCGG +
Preference number: 5 (lower is better)
Translates to: GVSAAGTIQTPTASLAWGFSYLV*ISWISR
Trigger: CCGAGAAATCCAAGATATCAAAACCAAGTATGAGAA...TCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTTCTGTTTTAAACCTTTaGACCAGCGCTTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSSVLNL*TSASKS
Trigger: AGACTTGGAAGCGCTGGTCAAAAGGTTTAAAACAGA...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp TGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTCCCTGGGGTGGCCTTTaGTACCCTCAGGGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: CLCIRLSMDAWLLPHFDCPWGGL*YPQGEV
Trigger: TACCTCTCCCTGAGGGTACAAAAGGCCACCCCAGGG...ACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp CAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGGCCTGGAATGAATTTTaGCCATTTCTGATCCACATT +
Preference number: 5 (lower is better)
Translates to: QGPYRLQPQVWLGDRHAVAWNEF*PFLIHI
Trigger: AATGTGGATCAGAAATGGCAAAAATTCATTCCAGGC...CACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGCCTGGAATGAATTTTaGCCATTTCTGATCCACATT +
Preference number: 5 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSAWNEF*PFLIHI
Trigger: AATGTGGATCAGAAATGGCAAAAATTCATTCCAGGC...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GAGAAGCTTAAACATCCCATTTCCAGTGACACACACCTGAGTGTTATCCTGTGGGTGCCAACGACAATCTaGTCATCAGCCACCCAGGTG +
Preference number: 5 (lower is better)
Translates to: EKLKHPISSDTHLSVILWVPTTI*SSATQV
Trigger: CACCTGGGTGGCTGATGACAAGATTGTCGTTGGCAC...CCACAGGATAACACTCAGGTGTGTGTCACTGGAAATGGGATGTTTAAGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp TCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGAATAGTTCCAGGGTGTTaGTTTCATAATTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: SVLQGPYRLQPQVWLGDRIVPGC*FHNSKG
Trigger: GCCTTTGGAATTATGAAACAAACACCCTGGAACTAT...TCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTTTCATGAGGCGTAGTTaGTCAGCAAACCCTACTACA +
Preference number: 5 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFFMRRS*SANPTT
Trigger: TGTAGTAGGGTTTGCTGACAAACTACGCCTCATGAA...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTATTTCCTGGATGAACTaGTCTGTTAGCTCCTTAATC +
Preference number: 5 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSISWMN*SVSSLI
Trigger: GATTAAGGAGCTAACAGACAAGTTCATCCAGGAAAT...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGAGGTTGCTGGGGTCAGTGCTGCAGGGACCATACAGACTCCAACCGCAAGTCTCTTGGTTTTGATATCTaGGATTTCTCGGTCTTCATC +
Preference number: 5 (lower is better)
Translates to: RGCWGQCCRDHTDSNRKSLGFDI*DFSVFI
Trigger: GATGAAGACCGAGAAATCCAAGATATCAAAACCAAG...AGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAGCACTGACCCCAGCAACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTGATGTTCAGCTCCAGTaGAGTGTTCTGCTTATGGAA +
Preference number: 5 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFDVQLQ*SVLLME
Trigger: TTCCATAAGCAGAACACTCAACTGGAGCTGAACATC...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS TCA 90 bp GGAGGAGAAAGAAGACTGTCACTGGGTGTGACAGAAACCACCCAATaGTCCCCTTTTCCACAGTCAAATACTACCCTTTGGCTTGGGAAC +
Preference number: 5 (lower is better)
Translates to: GGERRLSLGVTETTQ*SPFPQSNTTLWLGN
Trigger: GTTCCCAAGCCAAAGGGTAGTATTTGACTGTGGAAAAGGGGATCATTGGGTGGTTTCTGTCACACCCAGTGACAGTCTTCTTTCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534615.1
CDS GCA 90 bp CGCTTGAGGCCTTGGATGTCCTTCTCCAGAGACTTAATGACTCCTTaGAGCTTCATCTGCTCTCCTTTTAGGGTCTCGATGTCATTGGTT +
Preference number: 5 (lower is better)
Translates to: RLRPWMSFSRDLMTP*SFICSPFRVSMSLV
Trigger: AACCAATGACATCGAGACCCTAAAAGGAGAGCAGATGAAGCTGCAAGGAGTCATTAAGTCTCTGGAGAAGGACATCCAAGGCCTCAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 90 bp CACCCAATGATCCCCTTTTCCACAGTCAAATACTACCCTTTGGCTTaGGAACCGTACACAAACTGCACATGGCCAAGCCTAGAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: HPMIPFSTVKYYPLA*EPYTNCTWPSLEAR
Trigger: TCTTGCTTCTAGGCTTGGCCATGTGCAGTTTGTGTACGGTTCCCAAGCCAAAGGGTAGTATTTGACTGTGGAAAAGGGGATCATTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534615.1
CDS-3UTR CAA 90 bp GGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTGTGTTTAAATTATTAAGAACTTaGCGCTTCCGGCAAGGGATG +
Preference number: 5 (lower is better)
Translates to: GPYRLQPQVWLGDRHAVFKLLRT*RFRQGM
Trigger: CATCCCTTGCCGGAAGCGCAAAGTTCTTAATAATTT...AAACACAGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp AGGTTCCTTGACCATTATGCTGGTCTCCCAACGCTGATCTCCAGATTCAAAGAGGCCAGTAGACAAGATTaGACTCTGGAGGTGACGTCT +
Preference number: 5 (lower is better)
Translates to: RFLDHYAGLPTLISRFKEASRQD*TLEVTS
Trigger: AGACGTCACCTCCAGAGTCAAATCTTGTCTACTGGC...CTCTTTGAATCTGGAGATCAGCGTTGGGAGACCAGCATAATGGTCAAGGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp GCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTTGAACATCCTCTGAAAGCTGGTTaGCTTCAGGGTTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: AFVCRWMLGCFHILTVEHPLKAG*LQGSLS
Trigger: GCTGAGGGAACCCTGAAGCAAACCAGCTTTCAGAGG...ATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATGGACAACAGGCAAATCCCTTaGAATAGGCTGCAATGGCAA +
Preference number: 5 (lower is better)
Translates to: FSCTVSEIARYRRLGLMDNRQIP*NRLQWQ
Trigger: TTGCCATTGCAGCCTATTCAAAGGGATTTGCCTGTT...GTCCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp GAAGAGTTTGCCTGTGTCAGTGCCAACGACAATCTTGTCATCAGCCACCCAGGTCCACCAGAAATCAGTTaGCTATCATCTGCATTCCAC +
Preference number: 5 (lower is better)
Translates to: EEFACVSANDNLVISHPGPPEIS*LSSAFH
Trigger: GTGGAATGCAGATGATAGCAAACTGATTTCTGGTGG...ACCTGGGTGGCTGATGACAAGATTGTCGTTGGCACTGACACAGGCAAACTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp CGGATGCAGGTAGCTAGACCGGTGATGGGTGCTGAGTGCAATGGATACATCAAAACAGCAAAGATAATTTaGGCATCGGGGGAGACAGTA +
Preference number: 5 (lower is better)
Translates to: RMQVARPVMGAECNGYIKTAKII*ASGETV
Trigger: TACTGTCTCCCCCGATGCCAAAATTATCTTTGCTGT...TTTGATGTATCCATTGCACTCAGCACCCATCACCGGTCTAGCTACCTGCATCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp CTGCAGGGACCATACAGACTCCAACCGCAAGTCTGGCTTGGGGACAGACATGCTTTCTCATACTTGGTTTaGATATCTTGGATTTCTCGG +
Preference number: 5 (lower is better)
Translates to: LQGPYRLQPQVWLGDRHAFSYLV*ISWISR
Trigger: CCGAGAAATCCAAGATATCAAAACCAAGTATGAGAA...AGCATGTCTGTCCCCAAGCCAGACTTGCGGTTGGAGTCTGTATGGTCCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp GCAATCTCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGCCTAGGCTAAATTCCTaGGTGATAGGACCGGCATGG +
Preference number: 5 (lower is better)
Translates to: AISLRVWSDPTAKIILASPRLNS*VIGPAW
Trigger: CCATGCCGGTCCTATCACCAAGGAATTTAGCCTAGG...CGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS TCA 90 bp TGCGCATCTCCTGATCGGTGGCTCTCAGTTTCTGCCACAATTCTGTaGTGTTCAGCTCCAGTTGAGTGTTCTGCTTATGGAAATTCTCCA +
Preference number: 5 (lower is better)
Translates to: CASPDRWLSVSATIL*CSAPVECSAYGNSP
Trigger: TGGAGAATTTCCATAAGCAGAACACTCAACTGGAGCTGAACATCACAGAATTGTGGCAGAAACTGAGAGCCACCGATCAGGAGATGCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 90 bp TCTTGCTCTTGGATCTGGTCTCTGAGGCGCTGGATTTCTAGGCGCTaGATTTCAATGATCCTCCCAGTTTCTTCTTGCTCATTCAACCTT +
Preference number: 5 (lower is better)
Translates to: SCSWIWSLRRWISRR*ISMILPVSSCSFNL
Trigger: AAGGTTGAATGAGCAAGAAGAAACTGGGAGGATCATTGAAATGCAGCGCCTAGAAATCCAGCGCCTCAGAGACCAGATCCAAGAGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp CGAGGTGCCCACAAACATCATGCGTCCAGAATGCGAGATGACAATGGCGGTGTAATAGTTCCAGGGTGTTaGTTTCATAATTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: RGAHKHHASRMRDDNGGVIVPGC*FHNSKG
Trigger: GCCTTTGGAATTATGAAACAAACACCCTGGAACTAT...TACACCGCCATTGTCATCTCGCATTCTGGACGCATGATGTTTGTGGGCACCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS TCA 90 bp GTGGCTCTCAGTTTCTGCCACAATTCTGTGATGTTCAGCTCCAGTTaGGTGTTCTGCTTATGGAAATTCTCCAGTTCAGCTTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: VALSFCHNSVMFSSS*VFCLWKFSSSASIS
Trigger: GGAGATGGAAGCTGAACTGGAGAATTTCCATAAGCAGAACACTCAACTGGAGCTGAACATCACAGAATTGTGGCAGAAACTGAGAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372492.9
CDS-3UTR CAA 90 bp AGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTGATAAATTATTAAGAACTTaGCGCTTCCGGCAAGGGATG +
Preference number: 5 (lower is better)
Translates to: RFFLHSLRDSEVPPIGTDKLLRT*RFRQGM
Trigger: CATCCCTTGCCGGAAGCGCAAAGTTCTTAATAATTT...ATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp ACCTCCATTGCTAAAGGAACACTCTCCGCATCCTCTAACAGAGTATTCTTTGAAGGTGATGCTGTAGAGTaGGTTCTTACTGGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: TSIAKGTLSASSNRVFFEGDAVE*VLTGAG
Trigger: GCCAGCACCAGTAAGAACCAACTCTACAGCATCACC...TTCAAAGAATACTCTGTTAGAGGATGCGGAGAGTGTTCCTTTAGCAATGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp ACCTCCATTGCTAAAGGAACACTCTCCGCATCCTCTAACAGAGTATTCTTTGAATGGGCCTGGTACTCATaGAATTCCTTCTGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: TSIAKGTLSASSNRVFFEWAWYS*NSFCRG
Trigger: GCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCCA...TTCAAAGAATACTCTGTTAGAGGATGCGGAGAGTGTTCCTTTAGCAATGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp TCCTCCAGGGCCTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTGTTATTTGTGCTaGTTGGTCAGTCTCTTAAAC +
Preference number: 5 (lower is better)
Translates to: SSRAWLLVSSLSRSCFSYSCYLC*LVSLLN
Trigger: GTTTAAGAGACTGACCAACAAGCACAAATAACAAGA...GTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAGGCCCTGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CAA 90 bp TTGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGAAGGACAATTAGGGCCCTGCTCACCTaGGTGATAGGACCGGCATGG +
Preference number: 5 (lower is better)
Translates to: LTVEHRYYFMRRVNGRTIRALLT*VIGPAW
Trigger: CCATGCCGGTCCTATCACCAAGGTGAGCAGGGCCCT...AATTGTCCTTCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp GGCAGGTTTTTCTTGCACAGTCTCAGAGATAGCGAGGTACCGCCGATTGGGACTACCTGGAATGAATTTTaGCCATTTCTGATCCACATT +
Preference number: 5 (lower is better)
Translates to: GRFFLHSLRDSEVPPIGTTWNEF*PFLIHI
Trigger: AATGTGGATCAGAAATGGCAAAAATTCATTCCAGGT...AGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACTGTGCAAGAAAAACCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS GCA 90 bp TGGATGTCCTTCTCCAGAGACTTAATGACTCCTTGCAGCTTCATCTaGTCTCCTTTTAGGGTCTCGATGTCATTGGTTCGTTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: WMSFSRDLMTPCSFI*SPFRVSMSLVRSSI
Trigger: GATTGAAGAACGAACCAATGACATCGAGACCCTAAAAGGAGAGCAGATGAAGCTGCAAGGAGTCATTAAGTCTCTGGAGAAGGACATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS-3UTR CAA 90 bp CTCTGTCTTTGTGATTCTGACTGCTCCAAGTATCTCCTAAAAGTGGAATCACACGCCAGTAGACAAGATTaGACTCTGGAGGTGACGTCT +
Preference number: 5 (lower is better)
Translates to: LCLCDSDCSKYLLKVESHASRQD*TLEVTS
Trigger: AGACGTCACCTCCAGAGTCAAATCTTGTCTACTGGC...GTGTGATTCCACTTTTAGGAGATACTTGGAGCAGTCAGAATCACAAAGACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp CTCTGTCTTTGTGATTCTGACTGCTCCAAGTATCTCCTAAAAGTGGAATCACACCCATTGGTAGGTTCCTaGACCATTATGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LCLCDSDCSKYLLKVESHPLVGS*TIMLVS
Trigger: GGAGACCAGCATAATGGTCAAGGAACCTACCAATGG...GTGTGATTCCACTTTTAGGAGATACTTGGAGCAGTCAGAATCACAAAGACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp CTCTGTCTTTGTGATTCTGACTGCTCCAAGTATCTCCTAAAAGTGGAATCACACGAATCTGCAATCTCCTaGAGGGTGTGGTCTGATCCA +
Preference number: 5 (lower is better)
Translates to: LCLCDSDCSKYLLKVESHESAIS*RVWSDP
Trigger: TGGATCAGACCACACCCTCAAGGAGATTGCAGATTC...GTGTGATTCCACTTTTAGGAGATACTTGGAGCAGTCAGAATCACAAAGACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTGGGACTAGAAGCAACTTTTGGTaGTTGCAACATTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: SHRYPGAVFHTLPASSGTRSNFW*LQHSMS
Trigger: GGACATGGAATGTTGCAACAACCAAAAGTTGCTTCT...AGTCCCAGAGGATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS TCA 90 bp TCTCCAGTTCAGCTTCCATCTCCTGAATCTGTTCCTTCATCACCCTaGTCTCATTCTCTCGAGGTTCTATTTGCTTCTTCAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: SPVQLPSPESVPSSP*SHSLEVLFASSAPL
Trigger: TAAAGGAGCTGAAGAAGCAAATAGAACCTCGAGAGAATGAGATCAGGGTGATGAAGGAACAGATTCAGGAGATGGAAGCTGAACTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372492.9
CDS-3UTR CAA 90 bp TGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTAACAGGCAAATCCCTTaGAATAGGCTGCAATGGCAA +
Preference number: 5 (lower is better)
Translates to: CLCIRLSMDAWLLPHFDCNRQIP*NRLQWQ
Trigger: TTGCCATTGCAGCCTATTCAAAGGGATTTGCCTGTT...ACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp GCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTTGAACATTTCATGAGGCGTAGTTaGTCAGCAAACCCTACTACA +
Preference number: 5 (lower is better)
Translates to: AFVCRWMLGCFHILTVEHFMRRS*SANPTT
Trigger: TGTAGTAGGGTTTGCTGACAAACTACGCCTCATGAA...ATGTTCAACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp ATGTTATTAAATACATTTGTAATGTTGTGCAGCCATTGCCACCAACTACCCCCATGGGCCTGGTACTCATaGAATTCCTTCTGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: MLLNTFVMLCSHCHQLPPWAWYS*NSFCRG
Trigger: GCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCCA...TGGGGGTAGTTGGTGGCAATGGCTGCACAACATTACAAATGTATTTAATAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TCCTTGAGGGTGTGGTCTGATCCAACAGCAAAGATAATTTTGGCATCGGGGGAGACCTGGAATGAATTTTaGCCATTTCTGATCCACATT +
Preference number: 5 (lower is better)
Translates to: SLRVWSDPTAKIILASGETWNEF*PFLIHI
Trigger: AATGTGGATCAGAAATGGCAAAAATTCATTCCAGGT...CTCCCCCGATGCCAAAATTATCTTTGCTGTTGGATCAGACCACACCCTCAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp TTGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGAAGGACAATTGTGCCAACGACAATCTaGTCATCAGCCACCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LTVEHRYYFMRRVNGRTIVPTTI*SSATQV
Trigger: CACCTGGGTGGCTGATGACAAGATTGTCGTTGGCAC...AATTGTCCTTCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp GTATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATGGTGATGCTGTAGAGTaGGTTCTTACTGGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: VSPKSGITLYLSFCGWPYGDAVE*VLTGAG
Trigger: GCCAGCACCAGTAAGAACCAACTCTACAGCATCACC...ATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp AGAATTCCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCGTGGCTATAAGGGGTTaGCGGATGCAGGTAGCTAGA +
Preference number: 5 (lower is better)
Translates to: RIPFLFRQGIVPLYRYTIVAIRG*RMQVAR
Trigger: TCTAGCTACCTGCATCCGCAAACCCCTTATAGCCAC...GATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGGAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp ACCTCCATTGCTAAAGGAACACTCTCCGCATCCTCTAACAGAGTATTCTTTGAATTCATGAGGCGTAGTTaGTCAGCAAACCCTACTACA +
Preference number: 5 (lower is better)
Translates to: TSIAKGTLSASSNRVFFEFMRRS*SANPTT
Trigger: TGTAGTAGGGTTTGCTGACAAACTACGCCTCATGAA...TTCAAAGAATACTCTGTTAGAGGATGCGGAGAGTGTTCCTTTAGCAATGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533339.1
CDS-3UTR CAA 90 bp ATGTTATTAAATACATTTGTAATGTTGTGCAGCCATTGCCACCAACTACCCCCATGTGTCCTTTCAGGCTaGAGATGTTCTCTAGGCTCG +
Preference number: 5 (lower is better)
Translates to: MLLNTFVMLCSHCHQLPPCVLSG*RCSLGS
Trigger: CGAGCCTAGAGAACATCTCAAGCCTGAAAGGACACA...TGGGGGTAGTTGGTGGCAATGGCTGCACAACATTACAAATGTATTTAATAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp CTGGCTCTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATTGTTATTTGTGCTTGTaGGTCAGTCTCTTAAACAGA +
Preference number: 5 (lower is better)
Translates to: LALGLIVIPELFFILFLHCYLCL*VSLLNR
Trigger: TCTGTTTAAGAGACTGACCAACAAGCACAAATAACA...ATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CAA 90 bp CTTGGTCTCATCGTTATCCCGGAGCTGTTTTTCATACTCTTCCTGCATCCTCTGGAAATTTCTTGTTATTaGTGCTTGTTGGTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: LGLIVIPELFFILFLHPLEISCY*CLLVSL
Trigger: GAGACTGACCAACAAGCACAAATAACAAGAAATTTC...CAGAGGATGCAGGAAGAGTATGAAAAACAGCTCCGGGATAACGATGAGACCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CAA 90 bp GGTACTTCTCATATTCTAGAAGCAACTTTTGGTTGTTGCAACATTCCATGTCCTCTGTTTGAGCATAGCTaGGGCAGTATATGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GTSHILEATFGCCNIPCPLFEHS*GSICQS
Trigger: GGACTGGCATATACTGCCCAAGCTATGCTCAAACAG...AGGACATGGAATGTTGCAACAACCAAAAGTTGCTTCTAGAATATGAGAAGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS TCA 90 bp ACTTTAGAATGGGGTCATTCTCCTGAATCTGTTCCTTCATCACCCTaGTCTCATTCTCTCGAGGTTCTATTTGCTTCTTCAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: TLEWGHSPESVPSSP*SHSLEVLFASSAPL
Trigger: TAAAGGAGCTGAAGAAGCAAATAGAACCTCGAGAGAATGAGATCAGGGTGATGAAGGAACAGATTCAGGAGAATGACCCCATTCTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610710.4
CDS-3UTR CAA 90 bp ACGGCATCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGAAATTATTAAGAACTTaGCGCTTCCGGCAAGGGATG +
Preference number: 5 (lower is better)
Translates to: TASTKRPLIMHNIMVKTLKLLRT*RFRQGM
Trigger: CATCCCTTGCCGGAAGCGCAAAGTTCTTAATAATTT...CAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGATGCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TGCTTATGCATTCGTCTGTCGATGGATGCTTGGTTGCTTCCACATTTTGACTGTATAGTTCCAGGGTGTTaGTTTCATAATTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: CLCIRLSMDAWLLPHFDCIVPGC*FHNSKG
Trigger: GCCTTTGGAATTATGAAACAAACACCCTGGAACTAT...ACAGTCAAAATGTGGAAGCAACCAAGCATCCATCGACAGACGAATGCATAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TTGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGAAGGACAATTTGTGTACTCATGGTATaGCCCCTGGGGTGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LTVEHRYYFMRRVNGRTICVLMV*PLGWPF
Trigger: AAAAGGCCACCCCAGGGGCAATACCATGAGTACACA...AATTGTCCTTCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS TCA 90 bp CTCCTTAAATCTGTCCTCTGTACAGCAGCCAGAATGAACCTGGAATaGATTTTTGCCATTTCTGATCCACATTGTACTTCACACAGTGAT +
Preference number: 5 (lower is better)
Translates to: LLKSVLCTAARMNLE*IFAISDPHCTSHSD
Trigger: ATCACTGTGTGAAGTACAATGTGGATCAGAAATGGCAAAAATTCATTCCAGGTTCATTCTGGCTGCTGTACAGAGGACAGATTTAAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525227.5
ENST00000533339.1
CDS-3UTR CAA 90 bp AGAATTCCCTTCCTTTTTAGGCAGGGTATTGTTCCATTGTATAGATATACCATCAGGCTCTTTGAGCCATaGGTAGGTTCCTTGACCATT +
Preference number: 5 (lower is better)
Translates to: RIPFLFRQGIVPLYRYTIRLFEP*VGSLTI
Trigger: AATGGTCAAGGAACCTACCAATGGCTCAAAGAGCCT...GATGGTATATCTATACAATGGAACAATACCCTGCCTAAAAAGGAAGGGAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTGTTTGTCAGACTGACTaGGATCATTGCTCTGCGGGT +
Preference number: 5 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIVCQTD*DHCSAG
Trigger: ACCCGCAGAGCAATGATCCAAGTCAGTCTGACAAAC...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TTTGAGCATAGCTTGGGCAGTATATGCCAGTCCTGTCTTGAAAGTGGAAATTTCATTTCCTGGATGAACTaGTCTGTTAGCTCCTTAATC +
Preference number: 5 (lower is better)
Translates to: FEHSLGSICQSCLESGNFISWMN*SVSSLI
Trigger: GATTAAGGAGCTAACAGACAAGTTCATCCAGGAAAT...GAAATTTCCACTTTCAAGACAGGACTGGCATATACTGCCCAAGCTATGCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CAA 90 bp CATAGCTTGGGCAGTATATGCCAGTCCTGTCTTGAAAGTGGAAATTTCTTGTTATTTTCTCCTGCAGTTTaGCCTCGTAAAACTCAGTCA +
Preference number: 5 (lower is better)
Translates to: HSLGSICQSCLESGNFLLFSPAV*PRKTQS
Trigger: TGACTGAGTTTTACGAGGCAAAACTGCAGGAGAAAA...TAACAAGAAATTTCCACTTTCAAGACAGGACTGGCATATACTGCCCAAGCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CAA 90 bp CTCTGTCTTTGTGATTCTGACTGCTCCAAGTATCTCCTAAAAGTGGAATCACACGGTTGCTTCCACATTTaGACTGTTGAACATAGATAC +
Preference number: 5 (lower is better)
Translates to: LCLCDSDCSKYLLKVESHGCFHI*TVEHRY
Trigger: GTATCTATGTTCAACAGTCAAAATGTGGAAGCAACC...GTGTGATTCCACTTTTAGGAGATACTTGGAGCAGTCAGAATCACAAAGACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTGATGGCAGGTTTTTCTaGCACAGTCTCAGAGATAGC +
Preference number: 5 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIDGRFF*HSLRDS
Trigger: GCTATCTCTGAGACTGTGCAAGAAAAACCTGCCATC...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TCCACCAAACGGCCCCTTATTATGCATAATATTATGGTGAAAACGTTGTACATAACAGCAAAGATAATTTaGGCATCGGGGGAGACAGTA +
Preference number: 5 (lower is better)
Translates to: STKRPLIMHNIMVKTLYITAKII*ASGETV
Trigger: TACTGTCTCCCCCGATGCCAAAATTATCTTTGCTGT...TATGTACAACGTTTTCACCATAATATTATGCATAATAAGGGGCCGTTTGGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TTGACTGTTGAACATAGATACTACTTTATGAGAAGGGTGAATGGAAGGACAATTCCACCAGAAATCAGTTaGCTATCATCTGCATTCCAC +
Preference number: 5 (lower is better)
Translates to: LTVEHRYYFMRRVNGRTIPPEIS*LSSAFH
Trigger: GTGGAATGCAGATGATAGCAAACTGATTTCTGGTGG...AATTGTCCTTCCATTCACCCTTCTCATAAAGTAGTATCTATGTTCAACAGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp TGGTACTTCTCATATTCTAGAAGCAACTTTTGGTTGTTGCAACATTCCATGTCCTATGCCAGTCCTGTCTaGAAAGTGGAAATTTCTTGT +
Preference number: 5 (lower is better)
Translates to: WYFSYSRSNFWLLQHSMSYASPV*KVEISC
Trigger: ACAAGAAATTTCCACTTTCAAGACAGGACTGGCATA...GGACATGGAATGTTGCAACAACCAAAAGTTGCTTCTAGAATATGAGAAGTACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS-3UTR CAA 90 bp TATCTCCTAAAAGTGGAATCACACTGTACTTATCTTTTTGTGGTTGGCCTTATTCCATGTGGTAGCACATaGCAGAATTCCCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: YLLKVESHCTYLFVVGLIPCGST*QNSLPF
Trigger: AAAAGGAAGGGAATTCTGCAATGTGCTACCACATGG...AATAAGGCCAACCACAAAAAGATAAGTACAGTGTGATTCCACTTTTAGGAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS-3UTR CAA 90 bp ATTGTTCCATTGTATAGATATACCATCTTTTGCTTATGCATTCGTCTGTCGATGGCCTGGAATGAATTTTaGCCATTTCTGATCCACATT +
Preference number: 5 (lower is better)
Translates to: IVPLYRYTIFCLCIRLSMAWNEF*PFLIHI
Trigger: AATGTGGATCAGAAATGGCAAAAATTCATTCCAGGC...CATCGACAGACGAATGCATAAGCAAAAGATGGTATATCTATACAATGGAACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS GCA 72 bp CTCTCCAGGTGCTCCCGCTGCCGGGTGTACTCCTGCTaGAGGTCTGTGTTCAGCCCTGCGATCTCCACCATG +
Preference number: 6 (lower is better)
Translates to: LSRCSRCRVYSC*RSVFSPAISTM
Trigger: CATGGTGGAGATCGCAGGGCTGAACACAGACCTGCAGCAGGAGTACACCCGGCAGCGGGAGCACCTGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 72 bp TTCCTCTCCAGGTGCTCCCGCTGCCGGGTGTACTCCTaGTGCAGGTCTGTGTTCAGCCCTGCGATCTCCACC +
Preference number: 6 (lower is better)
Translates to: FLSRCSRCRVYS*CRSVFSPAIST
Trigger: GGTGGAGATCGCAGGGCTGAACACAGACCTGCAGCAGGAGTACACCCGGCAGCGGGAGCACCTGGAGAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 72 bp GGGATGAACAAGGCACGTAGCAGGCAGGTGTGGGACTaGGTTCCTGGGGAGAGGGCCCTGCTCACCTTGGTG +
Preference number: 6 (lower is better)
Translates to: GMNKARSRQVWD*VPGERALLTLV
Trigger: CACCAAGGTGAGCAGGGCCCTCTCCCCAGGAACCCAGTCCCACACCTGCCTGCTACGTGCCTTGTTCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS GCA 72 bp TTGAGAGTGGCCAGGTTCCTCTCCAGGTGCTCCCGCTaGCGGGTGTACTCCTGCTGCAGGTCTGTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: LRVARFLSRCSR*RVYSCCRSVFS
Trigger: GCTGAACACAGACCTGCAGCAGGAGTACACCCGGCAGCGGGAGCACCTGGAGAGGAACCTGGCCACTCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 72 bp AGCCGAACTCCAGCGAGGGTGTGGAACCCTGTGACCTaGTCTTGCTCTTGGATCTGGTCTCTGAGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: SRTPARVWNPVT*SCSWIWSLRRW
Trigger: CCAGCGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGGGTTCCACACCCTCGCTGGAGTTCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 72 bp GCGAGGGTGTGGAACCCTGTGACCTGCTCTTGCTCTTaGATCTGGTCTCTGAGGCGCTGGATTTCTAGGCGC +
Preference number: 6 (lower is better)
Translates to: ARVWNPVTCSCS*IWSLRRWISRR
Trigger: GCGCCTAGAAATCCAGCGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGGGTTCCACACCCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 90 bp ACCAGAGGGGGTCAGTTGGTCTTCACCTCTAAGTCTACCTCGGAGTaGGAGAGGGAAGGAAGCCGAACTCCAGCGAGGGTGTGGAACCCT +
Preference number: 6 (lower is better)
Translates to: TRGGQLVFTSKSTSE*EREGSRTPARVWNP
Trigger: AGGGTTCCACACCCTCGCTGGAGTTCGGCTTCCTTCCCTCTCCAACTCCGAGGTAGACTTAGAGGTGAAGACCAACTGACCCCCTCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 72 bp TTGGAGAGGGAAGGAAGCCGAACTCCAGCGAGGGTGTaGAACCCTGTGACCTGCTCTTGCTCTTGGATCTGG +
Preference number: 6 (lower is better)
Translates to: LEREGSRTPARV*NPVTCSCSWIW
Trigger: CCAGATCCAAGAGCAAGAGCAGGTCACAGGGTTCCACACCCTCGCTGGAGTTCGGCTTCCTTCCCTCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 72 bp GAGAGGGCCCTGCTCACCTTGGTGATAGGACCGGCATaGGCCTGGTACTCATTGAATTCCTTCTGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: ERALLTLVIGPA*AWYSLNSFCRG
Trigger: GCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCCATGCCGGTCCTATCACCAAGGTGAGCAGGGCCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528956.5
CDS CAA 72 bp GGCTGTGGCTGGAGATGGCTCACCAGAGGGGGTCAGTaGGTCTTCACCTCTAAGTCTACCTCGGAGTTGGAG +
Preference number: 6 (lower is better)
Translates to: GCGWRWLTRGGQ*VFTSKSTSELE
Trigger: CTCCAACTCCGAGGTAGACTTAGAGGTGAAGACCAACTGACCCCCTCTGGTGAGCCATCTCCAGCCACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 72 bp GCTGTGGCTGGAGATGGCTCACCAGAGGGGGTCAGTTaGTCTTCACCTCTAAGTCTACCTCGGAGTTGGAGA +
Preference number: 6 (lower is better)
Translates to: AVAGDGSPEGVS*SSPLSLPRSWR
Trigger: TCTCCAACTCCGAGGTAGACTTAGAGGTGAAGACCAACTGACCCCCTCTGGTGAGCCATCTCCAGCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 72 bp GGTCAGTTGGTCTTCACCTCTAAGTCTACCTCGGAGTaGGAGAGGGAAGGAAGCCGAACTCCAGCGAGGGTG +
Preference number: 6 (lower is better)
Translates to: GQLVFTSKSTSE*EREGSRTPARV
Trigger: CACCCTCGCTGGAGTTCGGCTTCCTTCCCTCTCCAACTCCGAGGTAGACTTAGAGGTGAAGACCAACTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 90 bp GTTTCTTCTGGCTGTGGCTGGAGATGGCTCACCAGAGGGGGTCAGTaGGTCTTCACCTCTAAGTCTACCTCGGAGTTGGAGAGGGAAGGA +
Preference number: 6 (lower is better)
Translates to: VSSGCGWRWLTRGGQ*VFTSKSTSELEREG
Trigger: TCCTTCCCTCTCCAACTCCGAGGTAGACTTAGAGGTGAAGACCAACTGACCCCCTCTGGTGAGCCATCTCCAGCCACAGCCAGAAGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS TCA 72 bp GCCACGTGGGATCGAAGACCAAAAACATGCAGCGTCTaGGCTACCACGGCTGACATGATCTCCCGCCAAACA +
Preference number: 6 (lower is better)
Translates to: ATWDRRPKTCSV*ATTADMISRQT
Trigger: TGTTTGGCGGGAGATCATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTTTGGTCTTCGATCCCACGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000372492.9
ENST00000525227.5
ENST00000528956.5
ENST00000529956.5
ENST00000533339.1
ENST00000610710.4
CDS GCA 72 bp ATCTGCTTCTTGGTCTCTTCAAACTCCCGCAGCTGCTaGCTGACGTCTTCCTGTGCCTCTTCCAGAAGGGTG +
Preference number: 6 (lower is better)
Translates to: ICFLVSSNSRSC*LTSSCASSRRV
Trigger: CACCCTTCTGGAAGAGGCACAGGAAGACGTCAGGCAGCAGCTGCGGGAGTTTGAAGAGACCAAGAAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 72 bp GTGTTCAGCCCTGCGATCTCCACCATGTCTGCTCGCTaGACGTACTTCTCAAAGAGACCTCGAACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: VFSPAISTMSAR*TYFSKRPRTFS
Trigger: GGAGAAGGTTCGAGGTCTCTTTGAGAAGTACGTGCAGCGAGCAGACATGGTGGAGATCGCAGGGCTGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 72 bp GTGTGGAACCCTGTGACCTGCTCTTGCTCTTGGATCTaGTCTCTGAGGCGCTGGATTTCTAGGCGCTGCATT +
Preference number: 6 (lower is better)
Translates to: VWNPVTCSCSWI*SLRRWISRRCI
Trigger: AATGCAGCGCCTAGAAATCCAGCGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGTCACAGGGTTCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 90 bp TTAGTCACAAGCACCTCTTCGGCAAAGCCCACCTCCCTCTCTCGCTaGATTCCCCGGCCATCCTTATCAAAGACCTTCCAGGTGAACAGG +
Preference number: 6 (lower is better)
Translates to: LVTSTSSAKPTSLSR*IPRPSLSKTFQVNR
Trigger: CCTGTTCACCTGGAAGGTCTTTGATAAGGATGGCCGGGGAATCAAGCGAGAGAGGGAGGTGGGCTTTGCCGAAGAGGTGCTTGTGACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 72 bp AATGATCCTCCCAGTTTCTTCTTGCTCATTCAACCTTaGGGTGGGAGCTGTGCTGAGCATGTCCCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: NDPPSFFLLIQP*GGSCAEHVPAG
Trigger: CCCAGCAGGGACATGCTCAGCACAGCTCCCACCGCAAGGTTGAATGAGCAAGAAGAAACTGGGAGGATCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 72 bp CTTGGTCAGTTTCAGAGCTGCTTCAAGGTCATAGACTaGGGACCGAGTGAACTTCAGCTCCCTGCGGAGCTC +
Preference number: 6 (lower is better)
Translates to: LGQFQSCFKVID*GPSELQLPAEL
Trigger: GAGCTCCGCAGGGAGCTGAAGTTCACTCGGTCCCAAGTCTATGACCTTGAAGCAGCTCTGAAACTGACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 72 bp ACCTGCTCTTGCTCTTGGATCTGGTCTCTGAGGCGCTaGATTTCTAGGCGCTGCATTTCAATGATCCTCCCA +
Preference number: 6 (lower is better)
Translates to: TCSCSWIWSLRR*ISRRCISMILP
Trigger: TGGGAGGATCATTGAAATGCAGCGCCTAGAAATCCAGCGCCTCAGAGACCAGATCCAAGAGCAAGAGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 72 bp GCTACTGGCCGCCACCATCTGTTCATAGGAAGGGAGTaGAGAACTGACTGGTGGAAATTCAATCAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: ATGRHHLFIGRE*RTDWWKFNQAG
Trigger: TCCAGCCTGATTGAATTTCCACCAGTCAGTTCTCCACTCCCTTCCTATGAACAGATGGTGGCGGCCAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534615.1
CDS TCA 72 bp CAAAAACATGCAGCGTCTGAGCTACCACGGCTGACATaGTCTCCCGCCAAACAGTTCTGTAGGGATCCTAAG +
Preference number: 6 (lower is better)
Translates to: QKHAASELPRLT*SPAKQFCRDPK
Trigger: CTTAGGATCCCTACAGAACTGTTTGGCGGGAGATCATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529956.5
CDS TCA 72 bp AAGACCAAAAACATGCAGCGTCTGAGCTACCACGGCTaGCATGATCTCCCGCCAAACAGTTCTGTAGGGATC +
Preference number: 6 (lower is better)
Translates to: KTKNMQRLSYHG*HDLPPNSSVGI
Trigger: GATCCCTACAGAACTGTTTGGCGGGAGATCATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTTTGGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529956.5
CDS CCA 72 bp GTCTCGTCTCTTTCCTGGATCTCTCGCTTGAGGCCTTaGATGTCCTTCTCCAGAGACTTAATGACTCCTTGC +
Preference number: 6 (lower is better)
Translates to: VSSLSWISRLRP*MSFSRDLMTPC
Trigger: GCAAGGAGTCATTAAGTCTCTGGAGAAGGACATCCAAGGCCTCAAGCGAGAGATCCAGGAAAGAGACGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 90 bp CCACCCAATGATCCCCTTTTCCACAGTCAAATACTACCCTTTGGCTaGGGAACCGTACACAAACTGCACATGGCCAAGCCTAGAAGCAAG +
Preference number: 6 (lower is better)
Translates to: PPNDPLFHSQILPFG*GTVHKLHMAKPRSK
Trigger: CTTGCTTCTAGGCTTGGCCATGTGCAGTTTGTGTACGGTTCCCAAGCCAAAGGGTAGTATTTGACTGTGGAAAAGGGGATCATTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534615.1
CDS TCA 72 bp AAGACCAAAAACATGCAGCGTCTGAGCTACCACGGCTaGCATGATCTCCCGCCAAACAGTTCTGCTTTCGTT +
Preference number: 6 (lower is better)
Translates to: KTKNMQRLSYHG*HDLPPNSSAFV
Trigger: AACGAAAGCAGAACTGTTTGGCGGGAGATCATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTTTGGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525227.5
ENST00000528956.5
ENST00000610710.4
CDS TCA 72 bp AGCACCTTCCTCACCTGCTTTCTGAAGTTGTATAAGTaGATCTCGACCCTCTGGGGCCACTTTAGAATGGGG +
Preference number: 6 (lower is better)
Translates to: STFLTCFLKLYK*ISTLWGHFRMG
Trigger: CCCCATTCTAAAGTGGCCCCAGAGGGTCGAGATTCACTTATACAACTTCAGAAAGCAGGTGAGGAAGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610710.4
CDS GCA 72 bp TGGATCTGGTCTCTGAGGCGCTGGATTTCTAGGCGCTaGATTTCAATGATCCTCCCAGTTTCTTCTTGCTCA +
Preference number: 6 (lower is better)
Translates to: WIWSLRRWISRR*ISMILPVSSCS
Trigger: TGAGCAAGAAGAAACTGGGAGGATCATTGAAATGCAGCGCCTAGAAATCCAGCGCCTCAGAGACCAGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CCA 72 bp TCAAAGGTAAGCAACATCTTGGTGATAGGACCGGCATaGGCCTGGTACTCATTGAATTCCTTCTGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: SKVSNILVIGPA*AWYSLNSFCRG
Trigger: GCCTCTGCAGAAGGAATTCAATGAGTACCAGGCCCATGCCGGTCCTATCACCAAGATGTTGCTTACCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 72 bp AGTCTCGTCTCTTTCCTGGATCTCTCGCTTGAGGCCTaGGATGTCCTTCTCCAGAGACTTAATGACTCCTTG +
Preference number: 6 (lower is better)
Translates to: SLVSFLDLSLEA*DVLLQRLNDSL
Trigger: CAAGGAGTCATTAAGTCTCTGGAGAAGGACATCCAAGGCCTCAAGCGAGAGATCCAGGAAAGAGACGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 72 bp GATCCCCTTTTCCACAGTCAAATACTACCCTTTGGCTaGGGAACCGTACACAAACTGCACATGGCCAAGCCT +
Preference number: 6 (lower is better)
Translates to: DPLFHSQILPFG*GTVHKLHMAKP
Trigger: AGGCTTGGCCATGTGCAGTTTGTGTACGGTTCCCAAGCCAAAGGGTAGTATTTGACTGTGGAAAAGGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534615.1
CDS CAA 90 bp TCGGACTTTCTTGGTCAGTTTCAGAGCTGCTTCAAGGTCATAGACTaGGGACCGAGTGAACTTCAGCTCCCTGCGGAGCTCATTAATTTC +
Preference number: 6 (lower is better)
Translates to: SDFLGQFQSCFKVID*GPSELQLPAELINF
Trigger: GAAATTAATGAGCTCCGCAGGGAGCTGAAGTTCACTCGGTCCCAAGTCTATGACCTTGAAGCAGCTCTGAAACTGACCAAGAAAGTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS TCA 72 bp AAGACCAAAAACATGCAGCGTCTGAGCTACCACGGCTaGCATGATCTCCCGCCAAACAGTTCTTTCGTTTCT +
Preference number: 6 (lower is better)
Translates to: KTKNMQRLSYHG*HDLPPNSSFVS
Trigger: AGAAACGAAAGAACTGTTTGGCGGGAGATCATGTCAGCCGTGGTAGCTCAGACGCTGCATGTTTTTGGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000533339.1
CDS TCA 72 bp CCTGATCGGTGGCTCTCAGTTTCTGCCACAATTCTGTaGTGTTCAGCTCCAGTTGAGTGTTCTGCTTATGGA +
Preference number: 6 (lower is better)
Translates to: PDRWLSVSATIL*CSAPVECSAYG
Trigger: TCCATAAGCAGAACACTCAACTGGAGCTGAACATCACAGAATTGTGGCAGAAACTGAGAGCCACCGATCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 72 bp CCTTGGATGTCCTTCTCCAGAGACTTAATGACTCCTTaGAGCTTCATCTGCTCTCCTTTTAGGGTCTCGATG +
Preference number: 6 (lower is better)
Translates to: PWMSFSRDLMTP*SFICSPFRVSM
Trigger: CATCGAGACCCTAAAAGGAGAGCAGATGAAGCTGCAAGGAGTCATTAAGTCTCTGGAGAAGGACATCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 72 bp AAATACTACCCTTTGGCTTGGGAACCGTACACAAACTaGACATGGCCAAGCCTAGAAGCAAGAGAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: KYYPLAWEPYTN*TWPSLEARECL
Trigger: CAAGCACTCTCTTGCTTCTAGGCTTGGCCATGTGCAGTTTGTGTACGGTTCCCAAGCCAAAGGGTAGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534615.1
CDS CAA 72 bp GTGAACTTCAGCTCCCTGCGGAGCTCATTAATTTCCTaGATCAGAGAGACATTTTCCTGCATGATGCGGACG +
Preference number: 6 (lower is better)
Translates to: VNFSSLRSSLIS*IRETFSCMMRT
Trigger: CGTCCGCATCATGCAGGAAAATGTCTCTCTGATCAAGGAAATTAATGAGCTCCGCAGGGAGCTGAAGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 90 bp AGAAACCACCCAATGATCCCCTTTTCCACAGTCAAATACTACCCTTaGGCTTGGGAACCGTACACAAACTGCACATGGCCAAGCCTAGAA +
Preference number: 6 (lower is better)
Translates to: RNHPMIPFSTVKYYP*AWEPYTNCTWPSLE
Trigger: TTCTAGGCTTGGCCATGTGCAGTTTGTGTACGGTTCCCAAGCCAAAGGGTAGTATTTGACTGTGGAAAAGGGGATCATTGGGTGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534615.1
CDS CAA 90 bp ACTCCTTGCAGCTTCATCTGCTCTCCTTTTAGGGTCTCGATGTCATaGGTTCGTTCTTCAATCTCCTTCTGTAGGCTGCTGAACTTCTTC +
Preference number: 6 (lower is better)
Translates to: TPCSFICSPFRVSMS*VRSSISFCRLLNFF
Trigger: GAAGAAGTTCAGCAGCCTACAGAAGGAGATTGAAGAACGAACCAATGACATCGAGACCCTAAAAGGAGAGCAGATGAAGCTGCAAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 90 bp GGTGGCTCTCAGTTTCTGCCACAATTCTGTGATGTTCAGCTCCAGTaGAGTGTTCTGCTTATGGAAATTCTCCAGTTCAGCTTCCATCTC +
Preference number: 6 (lower is better)
Translates to: GGSQFLPQFCDVQLQ*SVLLMEILQFSFHL
Trigger: GAGATGGAAGCTGAACTGGAGAATTTCCATAAGCAGAACACTCAACTGGAGCTGAACATCACAGAATTGTGGCAGAAACTGAGAGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372492.9
CDS CAA 90 bp GGTGGCTCTCAGTTTCTGCCACAATTCTGTGATGTTCAGCTCCAGTaGAGTGTTCTGCTTATGGAAATTCTCCAGTTCAGCTTCCATCTG +
Preference number: 6 (lower is better)
Translates to: GGSQFLPQFCDVQLQ*SVLLMEILQFSFHL
Trigger: CAGATGGAAGCTGAACTGGAGAATTTCCATAAGCAGAACACTCAACTGGAGCTGAACATCACAGAATTGTGGCAGAAACTGAGAGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610710.4
CDS TCA 72 bp AGAAGACTGTCACTGGGTGTGACAGAAACCACCCAATaGTCCCCTTTTCCACAGTCAAATACTACCCTTTGG +
Preference number: 6 (lower is better)
Translates to: RRLSLGVTETTQ*SPFPQSNTTLW
Trigger: CCAAAGGGTAGTATTTGACTGTGGAAAAGGGGATCATTGGGTGGTTTCTGTCACACCCAGTGACAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534615.1
CDS GCA 72 bp TTCTTGTGGTCGGACTTTCTTGGTCAGTTTCAGAGCTaGTTCAAGGTCATAGACTTGGGACCGAGTGAACTT +
Preference number: 6 (lower is better)
Translates to: FLWSDFLGQFQS*FKVIDLGPSEL
Trigger: AAGTTCACTCGGTCCCAAGTCTATGACCTTGAAGCAGCTCTGAAACTGACCAAGAAAGTCCGACCACAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 72 bp AGCTTCATCTGCTCTCCTTTTAGGGTCTCGATGTCATaGGTTCGTTCTTCAATCTCCTTCTGTAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SFICSPFRVSMS*VRSSISFCRLL
Trigger: CAGCAGCCTACAGAAGGAGATTGAAGAACGAACCAATGACATCGAGACCCTAAAAGGAGAGCAGATGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS TCA 72 bp CCTCATGATGCCTGTTTCTCCCTTGAGCCGCAGGTTTaGTTCCTTTTCATCCCGAAGCTTTTTCTCATACTT +
Preference number: 6 (lower is better)
Translates to: PHDACFSLEPQV*FLFIPKLFLIL
Trigger: AAGTATGAGAAAAAGCTTCGGGATGAAAAGGAATCAAACCTGCGGCTCAAGGGAGAAACAGGCATCATGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS GCA 72 bp TTCTCCAGAGACTTAATGACTCCTTGCAGCTTCATCTaGTCTCCTTTTAGGGTCTCGATGTCATTGGTTCGT +
Preference number: 6 (lower is better)
Translates to: FSRDLMTPCSFI*SPFRVSMSLVR
Trigger: ACGAACCAATGACATCGAGACCCTAAAAGGAGAGCAGATGAAGCTGCAAGGAGTCATTAAGTCTCTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS TCA 72 bp CAGCTTCCATCTCCTGAATCTGTTCCTTCATCACCCTaGTCTCATTCTCTCGAGGTTCTATTTGCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: QLPSPESVPSSP*SHSLEVLFASS
Trigger: TGAAGAAGCAAATAGAACCTCGAGAGAATGAGATCAGGGTGATGAAGGAACAGATTCAGGAGATGGAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372492.9
CDS TCA 72 bp TGGGGTCATTCTCCTGAATCTGTTCCTTCATCACCCTaGTCTCATTCTCTCGAGGTTCTATTTGCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: WGHSPESVPSSP*SHSLEVLFASS
Trigger: TGAAGAAGCAAATAGAACCTCGAGAGAATGAGATCAGGGTGATGAAGGAACAGATTCAGGAGAATGACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610710.4
CDS CCA 72 bp GTTCTGTCTCTGAAACTTCTTGTGGTCGGACTTTCTTaGTCAGTTTCAGAGCTGCTTCAAGGTCATAGACTT +
Preference number: 6 (lower is better)
Translates to: VLSLKLLVVGLS*SVSELLQGHRL
Trigger: AAGTCTATGACCTTGAAGCAGCTCTGAAACTGACCAAGAAAGTCCGACCACAAGAAGTTTCAGAGACAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 72 bp GCCAGTCCTGTCTTGAAAGTGGAAATTTCTTGTTATTaGTGCTTGTTGGTCAGTCTCTTAAACAGACCTGGT +
Preference number: 6 (lower is better)
Translates to: ASPVLKVEISCY*CLLVSLLNRPG
Trigger: ACCAGGTCTGTTTAAGAGACTGACCAACAAGCACAAATAACAAGAAATTTCCACTTTCAAGACAGGACTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS CAA 90 bp AGCTTGGGCAGTATATGCCAGTCCTGTCTTGAAAGTGGAAATTTCTaGTTATTTGTGCTTGTTGGTCAGTCTCTTAAACAGACCTGGTTT +
Preference number: 6 (lower is better)
Translates to: SLGSICQSCLESGNF*LFVLVGQSLKQTWF
Trigger: AAACCAGGTCTGTTTAAGAGACTGACCAACAAGCACAAATAACAAGAAATTTCCACTTTCAAGACAGGACTGGCATATACTGCCCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS CAA 90 bp AGGTTTGATTCCTTTTCATCCCGAAGCTTTTTCTCATACTTGGTTTaGATATCTTGGATTTCTCGGTCTTCATCTTCCTCAATCTGCTTC +
Preference number: 6 (lower is better)
Translates to: RFDSFSSRSFFSYLV*ISWISRSSSSSICF
Trigger: GAAGCAGATTGAGGAAGATGAAGACCGAGAAATCCAAGATATCAAAACCAAGTATGAGAAAAAGCTTCGGGATGAAAAGGAATCAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372492.9
ENST00000610710.4
CDS CAA 72 bp AGTATATGCCAGTCCTGTCTTGAAAGTGGAAATTTCTaGTTATTTGTGCTTGTTGGTCAGTCTCTTAAACAG +
Preference number: 6 (lower is better)
Translates to: SICQSCLESGNF*LFVLVGQSLKQ
Trigger: CTGTTTAAGAGACTGACCAACAAGCACAAATAACAAGAAATTTCCACTTTCAAGACAGGACTGGCATATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428122.1
CDS TCA 72 bp TTTCTGATCCACATTGTACTTCACACAGTGATTTCCTaGAGGAAATATAATGATCTGTTCATCGAAGTAGAA +
Preference number: 6 (lower is better)
Translates to: FLIHIVLHTVIS*RKYNDLFIEVE
Trigger: TTCTACTTCGATGAACAGATCATTATATTTCCTTCAGGAAATCACTGTGTGAAGTACAATGTGGATCAGAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372492.9
ENST00000525227.5
ENST00000528956.5
ENST00000529956.5
ENST00000533339.1
ENST00000610710.4