RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP54 (Homo sapiens)

Ensembl gene IDs: ENSG00000188596

Ensembl transcript IDs: ENST00000342887.1, ENST00000524981.9, ENST00000550977.2, ENST00000553778.6, ENST00000554108.6, ENST00000554621.1, ENST00000554821.1, ENST00000556591.1, ENST00000637336.1

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTaGGGAATCGCCACACTGACTTCCACAAAGGTTGAACTAGTTTAC +
Preference number: 1 (lower is better)
Translates to: VMGWLGQMVFLVLDP*GIATLTSTKVELVY
Trigger: GTAAACTAGTTCAACCTTTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR TCA 90 bp GGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATaGGAGCGAGCTGAGGAGATATACAGACCTGGAACTCACAGAGAA +
Preference number: 1 (lower is better)
Translates to: GKPKQLDKEIDKLDK*ERAEEIYRPGTHRE
Trigger: TTCTCTGTGAGTTCCAGGTCTGTATATCTCCTCAGCTCGCTCTCATTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
3UTR GCA 90 bp TTCCCACCTATGAGTGAGAACATGCGGTGTTTGATTTTTCGTCCTTaGGATAGTTTGCTGAGAATGATAGTTTCCAGCTTCATCCATGTC +
Preference number: 1 (lower is better)
Translates to: FPPMSENMRCLIFRP*DSLLRMIVSSFIHV
Trigger: GACATGGATGAAGCTGGAAACTATCATTCTCAGCAAACTATCGCAAGGACGAAAAATCAAACACCGCATGTTCTCACTCATAGGTGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR TCA 90 bp CTTCACATCCCTTGTAAGTTGGATTCCTGGGTATTTTATTCTCTTTaGAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTTTGT +
Preference number: 1 (lower is better)
Translates to: LHIPCKLDSWVFYSL*SNCEWEFTHDLALC
Trigger: ACAAAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCCAGGAATCCAACTTACAAGGGATGTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR CCA 90 bp TTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTaGCTCTTTGTTTGTCTGTTATTGGTGTATAAGAATGCTTGTGCT +
Preference number: 1 (lower is better)
Translates to: FILFEAIVNGSSLMI*LFVCLLLVYKNACA
Trigger: AGCACAAGCATTCTTATACACCAATAACAGACAAACAAAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACGGCAAGATCCAAGTTTaGACTAGAGGCTTCTGTGCA +
Preference number: 2 (lower is better)
Translates to: LELTEKIGVKLPYWELKHGKIQV*TRGFCA
Trigger: TGCACAGAAGCCTCTAGTTCAAACTTGGATCTTGCC...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
3UTR-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGTGCAAGCAAGACATTaGATCATGACTACTTCTTCT +
Preference number: 2 (lower is better)
Translates to: TDLELTEKIGVKLPYWELVQARH*IMTTSS
Trigger: AGAAGAAGTAGTCATGATTCAATGTCTTGCTTGCAC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
3UTR-3UTR TCA 90 bp GGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCCATTTTCACGATATTaGTTCTTCCTATCCCTAAGC +
Preference number: 2 (lower is better)
Translates to: GSNGISSSRSLRNRHTDFPFSRY*FFLSLS
Trigger: GCTTAGGGATAGGAAGAATCAATATCGTGAAAATGG...GAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR CAA 90 bp ATGAGTGAGAACATGCGGTGTTTGATTTTTCGTCCTTGCGATAGTTaGCTGAGAATGATAGTTTCCAGCTTCATCCATGTCCCTACAAAG +
Preference number: 2 (lower is better)
Translates to: MSENMRCLIFRPCDS*LRMIVSSFIHVPTK
Trigger: CTTTGTAGGGACATGGATGAAGCTGGAAACTATCATTCTCAGCAAACTATCGCAAGGACGAAAAATCAAACACCGCATGTTCTCACTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAGTGCAAGCAAGACATTaGATCATGACTACTTCTTCT +
Preference number: 2 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVVQARH*IMTTSS
Trigger: AGAAGAAGTAGTCATGATTCAATGTCTTGCTTGCAC...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
3UTR-3UTR TCA 90 bp ATAAATTACCTAGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTATCCCTATGGGAGTTCACTCATaGTTTGGCTCTTTGTTTGTC +
Preference number: 2 (lower is better)
Translates to: INYLGSMAIFTILILPIPMGVHS*FGSLFV
Trigger: GACAAACAAAGAGCCAAATCATGAGTGAACTCCCAT...AGGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCTAGGTAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR-3UTR CCA 90 bp GTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGATTTTTCTGCATAGTATTCCATaGTGTATACGTGCCACATTT +
Preference number: 2 (lower is better)
Translates to: VLIVQFPPMSENMRCLIFLHSIP*CIRATF
Trigger: AAATGTGGCACGTATACACCATGGAATACTATGCAG...AAAAATCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACAAGACATTGAATCATaGCTACTTCTTCTCACCAAA +
Preference number: 2 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVQDIES*LLLLTK
Trigger: TTTGGTGAGAAGAAGTAGTCATGATTCAATGTCTTG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
3UTR CAA 90 bp GTGAATGGGAGTTCACTCATGATTTGGCTCTTTGTTTGTCTGTTATaGGTGTATAAGAATGCTTGTGCTTTTTGCTCATTGATTTTGTAT +
Preference number: 2 (lower is better)
Translates to: VNGSSLMIWLFVCLL*VYKNACAFCSLILY
Trigger: ATACAAAATCAATGAGCAAAAAGCACAAGCATTCTTATACACCAATAACAGACAAACAAAGAGCCAAATCATGAGTGAACTCCCATTCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATCAAGACATTGAATCATaGCTACTTCTTCTCACCAAA +
Preference number: 2 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYQDIES*LLLLTK
Trigger: TTTGGTGAGAAGAAGTAGTCATGATTCAATGTCTTG...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
3UTR-3UTR CCA 90 bp ATAAATTACCTAGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTATCCCTACATCCCTTGTAAGTTaGATTCCTGGGTATTTTATT +
Preference number: 2 (lower is better)
Translates to: INYLGSMAIFTILILPIPTSLVS*IPGYFI
Trigger: AATAAAATACCCAGGAATCCAACTTACAAGGGATGT...AGGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCTAGGTAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR-3UTR CAA 90 bp GGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCTCTTTTGGCTTAGGATaGACTTGGCGATGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: GSNGISSSRSLRNRHTDFSFGLG*TWRCRL
Trigger: GAGCCTGCATCGCCAAGTCAATCCTAAGCCAAAAGA...GAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR TCA 72 bp TGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTaGGGAATCGCCACACTGACTTCCACAAAGGTTGAA +
Preference number: 3 (lower is better)
Translates to: WLGQMVFLVLDP*GIATLTSTKVE
Trigger: TTCAACCTTTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR-3UTR CAA 90 bp ATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTCATTGTGGTTTTGATTaGCATTTTTCTGATGGCCAG +
Preference number: 3 (lower is better)
Translates to: MAGSNGISSSRSLRNRHTHCGFD*HFSDGQ
Trigger: CTGGCCATCAGAAAAATGCAAATCAAAACCACAATG...AGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR TCA 72 bp TATTTCTCCACATCCTCTCCAGCACCTCTTGTTTCCTaGCTTTTTAATGATCGCCATTCTAACTGGTGTGAG +
Preference number: 3 (lower is better)
Translates to: YFSTSSPAPLVS*LFNDRHSNWCE
Trigger: CTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAAGAGGTGCTGGAGAGGATGTGGAGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR TCA 72 bp TCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTaGGAACATGCGGTGTTTGATTTTTCGTCCTTGCGA +
Preference number: 3 (lower is better)
Translates to: SMCSHCSIPTYE*EHAVFDFSSLR
Trigger: TCGCAAGGACGAAAAATCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGTGTGCAAGCAAGACATaGAATCATGACTACTTCTTC +
Preference number: 3 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWCASKT*NHDYFF
Trigger: GAAGAAGTAGTCATGATTCAATGTCTTGCTTGCACA...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
3UTR-3UTR CAA 90 bp TATACGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACACTTGGCTTGGCCTCTCCAGCACCTCTaGTTTCCTGACTTTTTAATG +
Preference number: 3 (lower is better)
Translates to: YTCHIFLIQSIIVGHLAWPLQHL*FPDFLM
Trigger: CATTAAAAAGTCAGGAAACAAGAGGTGCTGGAGAGG...CCAAGCCAAGTGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR GCA 72 bp ATGAGTGAGAACATGCGGTGTTTGATTTTTCGTCCTTaGGATAGTTTGCTGAGAATGATAGTTTCCAGCTTC +
Preference number: 3 (lower is better)
Translates to: MSENMRCLIFRP*DSLLRMIVSSF
Trigger: GAAGCTGGAAACTATCATTCTCAGCAAACTATCGCAAGGACGAAAAATCAAACACCGCATGTTCTCACTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR-3UTR CAA 90 bp GGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCATTTGTCAATTTaGGCTTTTCTTGCCATTGCT +
Preference number: 3 (lower is better)
Translates to: GYIPSNGMAGSNGISSSRSHLSI*AFLAIA
Trigger: AGCAATGGCAAGAAAAGCCAAAATTGACAAATGGGA...TCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR-3UTR CAA 90 bp GGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGAGATGGTAGTTTCTTTTaGCTGTGCAGAAGCTCTTTA +
Preference number: 3 (lower is better)
Translates to: GYIPSNGMAGSNGISSSRDGSFF*LCRSSL
Trigger: TAAAGAGCTTCTGCACAGCAAAAAGAAACTACCATC...TCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR TCA 72 bp AAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATaGGAGCGAGCTGAGGAGATATACAGACCTGGAACT +
Preference number: 3 (lower is better)
Translates to: KQLDKEIDKLDK*ERAEEIYRPGT
Trigger: AGTTCCAGGTCTGTATATCTCCTCAGCTCGCTCTCATTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
3UTR-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTGTGCAAGCAAGACATaGAATCATGACTACTTCTTC +
Preference number: 3 (lower is better)
Translates to: AGQLINSEISKQYLEYLYCASKT*NHDYFF
Trigger: GAAGAAGTAGTCATGATTCAATGTCTTGCTTGCACA...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
3UTR-3UTR CAA 90 bp CTGGTTTGTATCCTCTTTTATTTCATTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGTTCACTCATGATTaGGCTCTTTGTTTGTCTGTT +
Preference number: 3 (lower is better)
Translates to: LVCILFYFIEQWFVVLLEEFTHD*ALCLSV
Trigger: AACAGACAAACAAAGAGCCAAATCATGAGTGAACTC...TTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR TCA 72 bp AAGTTTGAACTAGAGGCTTCTGTGCAAGCAAGACATTaGATCATGACTACTTCTTCTCACCAAATTTCCAAA +
Preference number: 3 (lower is better)
Translates to: KFELEASVQARH*IMTTSSHQISK
Trigger: TTTGGAAATTTGGTGAGAAGAAGTAGTCATGATTCAATGTCTTGCTTGCACAGAAGCCTCTAGTTCAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACCCTGCGCCGCCATATTaGCGCGCCCCGGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHPAPPY*RAPARL
Trigger: CAGGCGGGCCGGGGCGCGTCAATATGGCGGCGCAGG...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGCCGCCCGGTGCCTCTaGAGAGCAACTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELAARCL*RATAAS
Trigger: GCTGGCTGCAGTTGCTCTGCAGAGGCACCGGGCGGC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACGCCGCCCGGTGCCTCTaGAGAGCAACTGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHAARCL*RATAAS
Trigger: GCTGGCTGCAGTTGCTCTGCAGAGGCACCGGGCGGC...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTCGGGGCAGGTCCACTaGAGCAGCGAGCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYSGQVH*SSELRE
Trigger: CTCCCGGAGCTCGCTGCTTCAGTGGACCTGCCCCGA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAGCACGCCGAGCAAATaGCTCTCCGTGAATCCCGGC +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELSTPSK*LSVNPG
Trigger: GCCGGGATTCACGGAGAGGCATTTGCTCGGCGTGCT...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTATTGCAGCACTGTATaGCGCCCGGTGCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELYCSTV*RPVPLQ
Trigger: CTGCAGAGGCACCGGGCGGCATACAGTGCTGCAATA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACGCAAATGCCTCTCCGTaGATCCCGGCATGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHANASP*IPAWQS
Trigger: TGACTGCCATGCCGGGATTCACGGAGAGGCATTTGC...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGTCGCCAGCGGAGCACTaGGACAGGGTCTTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWSPAEH*DRVFCS
Trigger: GGAACAGAAGACCCTGTCTCAGTGCTCCGCTGGCGA...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACCCAGCACAGCTTCACTaGCCTGTGCAGCAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHPAQLH*PVQQLL
Trigger: TAAGAGCTGCTGCACAGGTCAGTGAAGCTGTGCTGG...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACTCGAGGGGGAGCCCTaGGCCGCCATATTGACGCGC +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVLEGEP*AAILTR
Trigger: GCGCGTCAATATGGCGGCGCAGGGCTCCCCCTCGAG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGCATCCTGGGGAGCAGTaGAGACACAGACATACAAGG +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELHPGEQ*RHRHTR
Trigger: CCTTGTATGTCTGTGTCTGCACTGCTCCCCAGGATG...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGCGCAGACAAGCGCTTTaGCTCGGCTGTATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELRRQAL*LGCILK
Trigger: CTTCAGAATACAGCCGAGCCAAAGCGCTTGTCTGCG...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAGGTCGGCGGCAGTTCTaGCAGAGACCCCGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKGRRQF*QRPRGG
Trigger: ACCACCTCGGGGTCTCTGCCAGAACTGCCGCCGACC...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAGCAACTGCAGCCAGCTaGAGCCGGGCCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVATAAS*SRASTT
Trigger: TGTGGTGGAGGCCCGGCTTCAGCTGGCTGCAGTTGC...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAGGTGGTAGAGTCGTCTaGCGGAGAGCTCGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKGGRVV*RRARGG
Trigger: TCCCCCTCGAGCTCTCCGTCAGACGACTCTACCACC...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATGCCATGTCAAGTACCTaGGTGACAGGAGCGGGACCA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYAMSST*VTGAGP
Trigger: TGGTCCCGCTCCTGTCACTCAGGTACTTGACATGGC...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGCTGCAGCAGGCCAGTTaGTCAACAGCGAAATCTCAA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELLQQAS*STAKSQ
Trigger: TTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAG...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACCAGAAGCTGGCGCTGTaGATACACCAGAAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHQKLAL*IHQKWC
Trigger: ACACCACTTCTGGTGTATGCACAGCGCCAGCTTCTG...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGATATGACTGCTCCTTaGAAACACCCCCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELDMTAP*KHPQMP
Trigger: TGGCATCTGGGGGTGTTTGCAAGGAGCAGTCATATC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGATTCTCAGCAGAAGCTaGCGCTGTGCATACACCAGA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELILSRS*RCAYTR
Trigger: TCTGGTGTATGCACAGCGCCAGCTTCTGCTGAGAAT...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACCGCAGACAAGCGCTTTaGCTCGGCTGTATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHRRQAL*LGCILK
Trigger: CTTCAGAATACAGCCGAGCCAAAGCGCTTGTCTGCG...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGTCCCCTGCGCTTTTTaGCTCCATACACACTTCATT +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELVPCAF*LHTHFI
Trigger: AATGAAGTGTGTATGGAGGCAAAAAGCGCAGGGGAC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAACCTCGAAGTCGCGGTaGAGGTCGGCGGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVTSKSR*RSAAVL
Trigger: CAGAACTGCCGCCGACCTCCACCGCGACTTCGAGGT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACGTTGTAATAGTCTGCTaGCAGCCTGGGGGCGTATTT +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHVVIVC*QPGGVF
Trigger: AAATACGCCCCCAGGCTGCCAGCAGACTATTACAAC...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACCCAGATGCCAACTCTTaGCAGAAACTCCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHPDANS*QKLLTV
Trigger: TACAGTGAGGAGTTTCTGTCAAGAGTTGGCATCTGG...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACAGCCCTGTATCTATCTaGGAAGAGTTCAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHSPVSI*EEFNAW
Trigger: CCAGGCATTGAACTCTTCTCAGATAGATACAGGGCT...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATGCAACTGCAGCCAGCTaGAGCCGGGCCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYATAAS*SRASTT
Trigger: TGTGGTGGAGGCCCGGCTTCAGCTGGCTGCAGTTGC...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATATTGCAGCACTGTATaGCGCCCGGTGCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKYCSTV*RPVPLQ
Trigger: CTGCAGAGGCACCGGGCGGCATACAGTGCTGCAATA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGCTCATGTTCCTCCACTaGTGTTGTTCTACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELLMFLH*CCSTEL
Trigger: AAGCTCTGTAGAACAACAGCAGTGGAGGAACATGAG...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACGCCGGCGGAATTCGTaGTTCTCTTCCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVRRRNS*FSSSVV
Trigger: CACCACGGAGGAAGAGAAGCACGAATTCCGCCGGCG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGCATCAGGTATCGTTGTaGTGCTTTCCTAACACTGGT +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELHQVSL*CFPNTG
Trigger: ACCAGTGTTAGGAAAGCAGCACAACGATACCTGATG...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAGCAACGTTCAGCTTTaGGATGTGGAAGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELSNVQL*DVEVLF
Trigger: GAACAACACTTCCACATCCCAAAGCTGAACGTTGCT...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGCTCCCCTTCGACTCTaGGGGCGACCTCGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIAPLRL*GRPRSR
Trigger: GCGACTTCGAGGTCGCCCCCAGAGTCGAAGGGGAGC...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTCTGCTGTGTCGGATTaGTCTGTTATGGTATTTGGA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELSAVSD*SVMVFG
Trigger: TCCAAATACCATAACAGATCAATCCGACACAGCAGA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGCACCTCAACCACAGATaGATGTTGAAATATTCTCGG +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELHLNHR*MLKYSR
Trigger: CCGAGAATATTTCAACATTCATCTGTGGTTGAGGTG...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTGGAAGACTGACCTATaGCCATCAGTTTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELWKTDL*PSVFCK
Trigger: TTTGCAGAAAACTGATGGTCATAGGTCAGTCTTCCA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTTGACACTATCCAGTTaGAAAGGCTTCCTCCTGATA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELLTLSS*KGFLLI
Trigger: TATCAGGAGGAAGCCTTTTCAACTGGATAGTGTCAA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCTGCAGCAGGCCAGTTaGTCAACAGCGAAATCTCAA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWLQQAS*STAKSQ
Trigger: TTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AATTGTGAATGGGAGTTCACTCATGATTTGGCTCTTTGTTTGTCTGTTATTGGTACAGGCCCCGGTGTGTaGTGTTCCCCTTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: NCEWEFTHDLALCLSVIGTGPGV*CSPSCV
Trigger: GACACAGGAAGGGGAACATCACACACCGGGGCCTGT...ACCAATAACAGACAAACAAAGAGCCAAATCATGAGTGAACTCCCATTCACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR GCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACAGTGGCTTTATAGCCTaGAGGTATTGGACAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHSGFIA*RYWTRH
Trigger: ATGCCTTGTCCAATACCTGCAGGCTATAAAGCCACT...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACAAGGAGGACAAGATATaGAGACACTGGACCACAGAT +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHKEDKI*RHWTTD
Trigger: ATCTGTGGTCCAGTGTCTGCATATCTTGTCCTCCTT...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTGTGGCAGAGCCACTTaGATGATGAGCCTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYCGRAT*MMSLKE
Trigger: CTCCTTAAGGCTCATCATGCAAGTGGCTCTGCCACA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGAAACTGGGATGCAGTaGTATCAAACATCTCATCCA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELETGMQ*YQTSHP
Trigger: TGGATGAGATGTTTGATAGCACTGCATCCCAGTTTC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACAGCCAGAAACTGGGATaGAGTGCTATCAAACATCTC +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHSQKLG*SAIKHL
Trigger: GAGATGTTTGATAGCACTGCATCCCAGTTTCTGGCT...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACAGCAACGTTCAGCTTTaGGATGTGGAAGTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHSNVQL*DVEVLF
Trigger: GAACAACACTTCCACATCCCAAAGCTGAACGTTGCT...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGCAGAGACTTGCATCCTaGTGTGATGTCCAACATTTT +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELQRLAS*CDVQHF
Trigger: AAAATGTTGGACATCACACCAGGATGCAAGTCTCTG...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAACAGCTTGGAACACTaGATTCTCCTTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELNSLEH*ILLCLQ
Trigger: TTGAAGACAAAGGAGAATTCAGTGTTCCAAGCTGTT...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATATCGCCAGCGGAGCACTaGGACAGGGTCTTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYISPAEH*DRVFCS
Trigger: GGAACAGAAGACCCTGTCTCAGTGCTCCGCTGGCGA...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCCAGTAGCCGCTCTGTaGCAGTTCGTGGCCATGATA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYPVAAL*QFVAMI
Trigger: TATCATGGCCACGAACTGTCACAGAGCGGCTACTGG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGCAGTATTCGCCTATTTaGATCAGAAAGAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELQYSPI*IRKSFQ
Trigger: TTGGAAGCTCTTTCTGATTCAAATAGGCGAATACTG...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTGTTTCTCTTCACGTTaGTTAGTGGTTCCATTGCAA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELCFSSR*LVVPLQ
Trigger: TTGCAATGGAACCACTAATCAACGTGAAGAGAAACA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAGTCTGGCAATTTGTTaGGATGGGAAAATCTCATTG +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELSLAIC*DGKISL
Trigger: CAATGAGATTTTCCCATCTCAACAAATTGCCAGACT...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATAGGGTCCTCTCCTCCTaGGAGTTCAGATGTAACATA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYRVLSS*EFRCNI
Trigger: TATGTTACATCTGAACTCTCAGGAGGAGAGGACCCT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACTTGACACTATCCAGTTaGAAAGGCTTCCTCCTGATA +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHLTLSS*KGFLLI
Trigger: TATCAGGAGGAAGCCTTTTCAACTGGATAGTGTCAA...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGGCAAGATCCAAGTTTaGACTAGAGGCTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWGKIQV*TRGFCA
Trigger: TGCACAGAAGCCTCTAGTTCAAACTTGGATCTTGCC...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGATAAGCTGGACAAATaGGAGCGAGCTGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWDKLDK*ERAEEI
Trigger: TATCTCCTCAGCTCGCTCTCATTTGTCCAGCTTATC...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATGATAAGCTGGACAAATaGGAGCGAGCTGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYDKLDK*ERAEEI
Trigger: TATCTCCTCAGCTCGCTCTCATTTGTCCAGCTTATC...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGAAGGTCAGGGGGTATTaGCATATGCATCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWKVRGY*HMHLLC
Trigger: ACAGAGGAGATGCATATGTCAATACCCCCTGACCTT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637336.1
CDS-3UTR GCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACTTCAGCCTCATACCTTaGACAAGGTTGTTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHFSLIP*TRLLGN
Trigger: ATTACCCAACAACCTTGTGCAAGGTATGAGGCTGAA...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATACTGTATGCCGCCCGGTaGCTCTGCAGAGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYILYAAR*LCRATA
Trigger: TGCAGTTGCTCTGCAGAGGCACCGGGCGGCATACAG...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGACATACAAGGTTGCTaGCAAATGGAAAATATCCTC +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELDIQGC*QMENIL
Trigger: GAGGATATTTTCCATTTGGCAGCAACCTTGTATGTC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTGCATACACCAGAAGTaGTGTCACTTGTTCTGTATA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELCIHQK*CHLFCI
Trigger: TATACAGAACAAGTGACACCACTTCTGGTGTATGCA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATGCTTCTCTTCCTCCGTaGTGGCTAAAGCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYASLPP*WLKPSF
Trigger: AAAAGAAGGCTTTAGCCACCACGGAGGAAGAGAAGC...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATACTCCATACACATGCTaGCCCACAGGAGATACTCTA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYTPYTC*PTGDTL
Trigger: TAGAGTATCTCCTGTGGGCCAGCATGTGTATGGAGT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
3UTR CAA 72 bp TATAGTTTGAAGTCAGGTAGCGTGATGCCTCCAGCTTaGTTCTTTTGGCTTAGGATTGACTTGGCGATGCAG +
Preference number: 4 (lower is better)
Translates to: YSLKSGSVMPPA*FFWLRIDLAMQ
Trigger: CTGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACAGTATTTGTAGTTCCTaGGTAAAGTTCCATAAGGCC +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHSICSS*VKFHKA
Trigger: GGCCTTATGGAACTTTACTCAGGAACTACAAATACT...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAACCTCACTGTAGTCTTTaGAACCCGGAGGTGAATGAC +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKPHCSL*NPEVND
Trigger: GTCATTCACCTCCGGGTTTCAAAGACTACAGTGAGG...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCTATCTTTGCTGATATaGCTGCTCCTTGCAAACACC +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWLSLLI*LLLANT
Trigger: GGTGTTTGCAAGGAGCAGTCATATCAGCAAAGATAG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTTTTGGCCAATAACATaGCATGGGGAAGATAGATAT +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELFWPIT*HGEDRY
Trigger: ATATCTATCTTCCCCATGTCATGTTATTGGCCAAAA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATATTTCTTTATCAGGTTaGACATCCTGGGGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYISLSG*TSWGAV
Trigger: CACTGCTCCCCAGGATGTTCAACCTGATAAAGAAAT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTTGGAAGAATTTCTGTaGTCCCTTTTGGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYLEEFL*SLLELQ
Trigger: CTGGAGCTCCAAAAGGGATCACAGAAATTCTTCCAA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGTCATATTCCCTCCATaGACGAAGAATCTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELVIFPP*TKNLCY
Trigger: ATAACAAAGATTCTTCGTTCATGGAGGGAATATGAC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACGCAAAGTTCTTTGTTTaGAGCTTGCGTTACCATTTC +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHAKFFV*SLRYHF
Trigger: GAAATGGTAACGCAAGCTTCAAACAAAGAACTTTGC...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGGAGGAATGTACCATTaGAAGCAAAGTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELGGMYH*KQSSLF
Trigger: AAACAAAGAACTTTGCTTTCAATGGTACATTCCTCC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATGAATATAGACGGCAGTaGGATATCAAATGGGACCTC +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYEYRRQ*DIKWDL
Trigger: GAGGTCCCATTTGATATCTCACTGCCGTCTATATTC...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGCAAGACATTGAATCATaGCTACTTCTTCTCACCAAA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELQDIES*LLLLTK
Trigger: TTTGGTGAGAAGAAGTAGTCATGATTCAATGTCTTG...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACGTGCAAGCAAGACATTaGATCATGACTACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHVQARH*IMTTSS
Trigger: AGAAGAAGTAGTCATGATTCAATGTCTTGCTTGCAC...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACAGAAGCTGGCGCTGTaGATACACCAGAAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVQKLAL*IHQKWC
Trigger: ACACCACTTCTGGTGTATGCACAGCGCCAGCTTCTG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCAGTTCCGTGTCCCCTaGGCTTTTTGCCTCCATACA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYQFRVP*AFCLHT
Trigger: TGTATGGAGGCAAAAAGCGCAGGGGACACGGAACTG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTCATGTTCCTCCACTaGTGTTGTTCTACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYLMFLH*CCSTEL
Trigger: AAGCTCTGTAGAACAACAGCAGTGGAGGAACATGAG...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGATAATCCAGCAAAGATaGTCTTGTGGCAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWIIQQR*SCGRAT
Trigger: AGTGGCTCTGCCACAAGAGCATCTTTGCTGGATTAT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAAGGACTCCATACACATaGTGGCCCACAGGAGATACT +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKRTPYT*WPTGDT
Trigger: AGTATCTCCTGTGGGCCAGCATGTGTATGGAGTCCT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCATCAGGTATCGTTGTaGTGCTTTCCTAACACTGGT +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWHQVSL*CFPNTG
Trigger: ACCAGTGTTAGGAAAGCAGCACAACGATACCTGATG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTTTAAGAGATGTGGTTaGCCAATTGTAACCAGAACT +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELFKRCG*PIVTRT
Trigger: AGTTCTGGTTACAATTGGCCAACCACATCTCTTAAA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGTATGGTGGGTACGCTTaGCATAGCAGTGGTCAATTA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWYGGYA*HSSGQL
Trigger: TAATTGACCACTGCTATGCCAAGCGTACCCACCATA...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGATCTTTGCTAACAGTTaGAGTCTGCAAAACTTGCAA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELIFANS*SLQNLQ
Trigger: TTGCAAGTTTTGCAGACTCCAACTGTTAGCAAAGAT...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGAGAAGTGTATCATCTaGCAAAGAAATTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELEKCII*QRNSRY
Trigger: GTATCTGGAATTTCTTTGCCAGATGATACACTTCTC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACCATGTGAAACTGTATTaGACTGAATGGCAAGAGATA +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHHVKLY*TEWQEI
Trigger: TATCTCTTGCCATTCAGTTCAATACAGTTTCACATG...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAGGTGACATTGGTGAGTaGGGGGCCAAATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVGDIGE*GAKFFP
Trigger: TGGAAAGAATTTGGCCCCTCACTCACCAATGTCACC...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGGTGACATTGGTGAGTaGGGGGCCAAATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYGDIGE*GAKFFP
Trigger: TGGAAAGAATTTGGCCCCTCACTCACCAATGTCACC...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAAAACCCGGAGGTGAATaGCTGTTGGTGACATTGGTG +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVKPGGE*LLVTLV
Trigger: CACCAATGTCACCAACAGTCATTCACCTCCGGGTTT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATAAACCCGGAGGTGAATaGCTGTTGGTGACATTGGTG +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYKPGGE*LLVTLV
Trigger: CACCAATGTCACCAACAGTCATTCACCTCCGGGTTT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACCTCACTGTAGTCTTTaGAACCCGGAGGTGAATGAC +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVPHCSL*NPEVND
Trigger: GTCATTCACCTCCGGGTTTCAAAGACTACAGTGAGG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTTGTGCTATCTTTGCTaGTATGACTGCTCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYLCYLC*YDCSLQ
Trigger: TTGCAAGGAGCAGTCATATCAGCAAAGATAGCACAA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAGCCACATCAAACAGATaGAGAGCAGGTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKATSNR*RAGNHF
Trigger: GAAGTGGTTACCTGCTCTTCATCTGTTTGATGTGGC...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATACCAGCACAGCTTCACTaGCCTGTGCAGCAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIPAQLH*PVQQLL
Trigger: TAAGAGCTGCTGCACAGGTCAGTGAAGCTGTGCTGG...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATATGTCAAGTACCTGAGTaGCAGGAGCGGGACCAAGGA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYICQVPE*QERDQG
Trigger: TCCTTGGTCCCGCTCCTGTCACTCAGGTACTTGACA...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACTGCCATAAACAATTCTaGGACAACATCATGAATCTC +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHCHKQF*DNIMNL
Trigger: GAGATTCATGATGTTGTCTCAGAATTGTTTATGGCA...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATACAGATTGTTCATCCTaGAGTGGCGAAGCAACAAAA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYTDCSS*SGEATK
Trigger: TTTTGTTGCTTCGCCACTTCAGGATGAACAATCTGT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATATTGCTTTGTCAGTTTaGGTAGGTGTGTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYIALSV*VGVSPT
Trigger: TGTTGGAGACACACCTACTCAAACTGACAAAGCAAT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp TATACGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACACTTGGCTTGGAGGGTCCTCTCCTCCTaGGAGTTCAGATGTAACATA +
Preference number: 4 (lower is better)
Translates to: YTCHIFLIQSIIVGHLAWRVLSS*EFRCNI
Trigger: TATGTTACATCTGAACTCTCAGGAGGAGAGGACCCT...CCAAGCCAAGTGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAAGGGTCCTCTCCTCCTaGGAGTTCAGATGTAACATA +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKRVLSS*EFRCNI
Trigger: TATGTTACATCTGAACTCTCAGGAGGAGAGGACCCT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTGGGTATTTTATTCTCTTTAGATACAGGTTCATCTaGGCTCTCCAGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: KRSFTSLVSWIPGYFILFRYRFI*ALQGIS
Trigger: AGAGATGCCCTGGAGAGCTCAGATGAACCTGTATCT...AAAGAGAATAAAATACCCAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCATGTTAGGATCACATaGTCGGAAACTGACCATCAT +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYHVRIT*SETDHH
Trigger: ATGATGGTCAGTTTCCGATCATGTGATCCTAACATG...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGAGTTGTAAAGGGATGTaGGAAGTGTATCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWSCKGM*EVYHLA
Trigger: TGCCAGATGATACACTTCTCACATCCCTTTACAACT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACAAATGAGAGCGAGCTaGGGAGATATACAGACCTGG +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVQMRAS*GDIQTW
Trigger: CCAGGTCTGTATATCTCCTCAGCTCGCTCTCATTTG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTGGGTATTTTATTCTCTTTCTAGTTCTAGATCCCTaGGGAATCGCCACACTGACT +
Preference number: 4 (lower is better)
Translates to: KRSFTSLVSWIPGYFILFLVLDP*GIATLT
Trigger: AGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAG...AAAGAGAATAAAATACCCAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR GCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACCATTACACACAAATTTaGTCCTCGGTCCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHHYTQI*SSVLFF
Trigger: AAAGAAAAGGACCGAGGAGCAAATTTGTGTGTAATG...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTTCAGCCTCATACCTTaGACAAGGTTGTTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYFSLIP*TRLLGN
Trigger: ATTACCCAACAACCTTGTGCAAGGTATGAGGCTGAA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTTTTTAGCAAATCTGTaGAGTTGCTTGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELFLANL*SCLLLQ
Trigger: TTGAAGCAACAAGCAACTGCACAGATTTGCTAAAAA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGATATGACTGCTCCTTaGAAACACCCCCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYDMTAP*KHPQMP
Trigger: TGGCATCTGGGGGTGTTTGCAAGGAGCAGTCATATC...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACGCTGAATTCCTAATTTaGATTTCTGCCATAGGAACA +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHAEFLI*ISAIGT
Trigger: TGTTCCTATGGCAGAAATGCAAATTAGGAATTCAGC...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGATACTTGGTAGTCCTTaGAAAACCACTATACACTTT +
Preference number: 4 (lower is better)
Translates to: TDLELTEKIGVKLPYWELILGSP*KTTIHF
Trigger: AAAGTGTATAGTGGTTTTGCAAGGACTACCAAGTAT...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAACTTGCACAAGGTTGTTaGGTAATATCTGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKLAQGC*VISGPL
Trigger: CAAGGGCCCAGATATTACCCAACAACCTTGTGCAAG...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATGACTTCTTTGATTGCTaGCTTGGAGAACATCTTGTG +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYDFFDC*LGEHLV
Trigger: CACAAGATGTTCTCCAAGCCAGCAATCAAAGAAGTC...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCTGCCATCTTCATTGTaGCCTCTCGAAAATATCTTC +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWLPSSL*PLENIF
Trigger: GAAGATATTTTCGAGAGGCCACAATGAAGATGGCAG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCTTGAAGGGCATAGCTaGAATCATTTAGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWLEGHS*NHLGSC
Trigger: GCAACTTCCTAAATGATTCCAGCTATGCCCTTCAAG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
3UTR CAA 72 bp GTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTaGATTTTTCGTCCTTGCGATAGTTTGCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: VQFPPMSENMRC*IFRPCDSLLRM
Trigger: CATTCTCAGCAAACTATCGCAAGGACGAAAAATCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGAGTATTTGTAGTTCCTaGGTAAAGTTCCATAAGGCC +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWSICSS*VKFHKA
Trigger: GGCCTTATGGAACTTTACTCAGGAACTACAAATACT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGACTTTAAGACTTCTTTaGTTGCTGGCTTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWTLRLL*LLAWRT
Trigger: TGTTCTCCAAGCCAGCAATCAAAGAAGTCTTAAAGT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTCTTTTCTGCGAAGATaGGAAGACTTCCAAGTGAAT +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYSFLRR*EDFQVN
Trigger: ATTCACTTGGAAGTCTTCTCATCTTCGCAGAAAAGA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATAGCCCTGTATCTATCTaGGAAGAGTTCAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYSPVSI*EEFNAW
Trigger: CCAGGCATTGAACTCTTCTCAGATAGATACAGGGCT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCATCTTTATTTTCAGTaGCAGAAGTTCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYHLYFQ*QKFLER
Trigger: TCTCTCCAGGAACTTCTGTCACTGAAAATAAAGATG...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGACAATTCCAATGCCATaGATCTGTGCAACAAATGCA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWTIPMP*ICATNA
Trigger: TGCATTTGTTGCACAGATTCATGGCATTGGAATTGT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGCCACATCAAACAGATaGAGAGCAGGTAACCACTTC +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYATSNR*RAGNHF
Trigger: GAAGTGGTTACCTGCTCTTCATCTGTTTGATGTGGC...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAGGAGACCTTAACCTCTaGAGTAAATGGAGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKGDLNL*SKWSRF
Trigger: AAACCTGCTCCATTTACTTCAGAGGTTAAGGTCTCC...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCCTGAATTTGGGAGATaGTTATTGTTTAGCCGTACT +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWPEFGR*LLFSRT
Trigger: AGTACGGCTAAACAATAATCATCTCCCAAATTCAGG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGAGTCTGGCAATTTGTTaGGATGGGAAAATCTCATTG +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWSLAIC*DGKISL
Trigger: CAATGAGATTTTCCCATCTCAACAAATTGCCAGACT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGGAATGTCTAACATCTaGAATCTTCAGAGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWGMSNI*NLQRLQ
Trigger: TTGAAGCCTCTGAAGATTTCAGATGTTAGACATTCC...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCTCTGACCATCATATGTaGTGTGCCAAATTTCATCTT +
Preference number: 4 (lower is better)
Translates to: GSNGISSSRSLRNRHTDFSDHHM*CAKFHL
Trigger: AAGATGAAATTTGGCACATCACATATGATGGTCAGA...GAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp GTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGATTTTTCCCATGCCTATGTCCTaGATGGTATTGCCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: VLIVQFPPMSENMRCLIFPMPMS*MVLPRF
Trigger: AAACCTAGGCAATACCATTCAGGACATAGGCATGGG...AAAAATCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp TATACGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACACTTGGCTTGGATTCCCACCTATGAGTaGGAACATGCGGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: YTCHIFLIQSIIVGHLAWIPTYE*EHAVFD
Trigger: ATCAAACACCGCATGTTCTCACTCATAGGTGGGAAT...CCAAGCCAAGTGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR GCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATATGAAAGCAACTTTCTaGTGTGTCGGATTGATCTGT +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYMKATF*CVGLIC
Trigger: ACAGATCAATCCGACACAGCAGAAAGTTGCTTTCAT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATGTAGAAAATACTATTaGAGCACTGTATGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKCRKYY*STVCRP
Trigger: CGGGCGGCATACAGTGCTGCAATAGTATTTTCTACA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGTCCCCTGCGCTTTTTaGCTCCATACACACTTCATT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYVPCAF*LHTHFI
Trigger: AATGAAGTGTGTATGGAGGCAAAAAGCGCAGGGGAC...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATCAGTTCCGTGTCCCCTaGGCTTTTTGCCTCCATACA +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYQFRVP*AFCLHT
Trigger: TGTATGGAGGCAAAAAGCGCAGGGGACACGGAACTG...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTCTGTTCAGTTAGAATaGTATGAGCCCGAGTTAACA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYSVQLE*YEPELT
Trigger: TGTTAACTCGGGCTCATAGCATTCTAACTGAACAGA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATATTCGTTGTAATAGTCTaGTGGCAGCCTGGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIFVVIV*WQPGGV
Trigger: TACGCCCCCAGGCTGCCAGCAGACTATTACAACGAA...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATACAATGGGTCCAGTTTaGAGTATTCGCCTATTTGAA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYTMGPV*SIRLFE
Trigger: TTCAAATAGGCGAATACTGCAAACTGGACCCATTGT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp AATCCAGTCTATCATTGTTGGACACTTGGCTTGGTTCCAAGTCTTTGCTATTGTCATCAGGTATCGTTGTaGTGCTTTCCTAACACTGGT +
Preference number: 4 (lower is better)
Translates to: NPVYHCWTLGLVPSLCYCHQVSL*CFPNTG
Trigger: ACCAGTGTTAGGAAAGCAGCACAACGATACCTGATG...ACAATAGCAAAGACTTGGAACCAAGCCAAGTGTCCAACAATGATAGACTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CCA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACCAGAGGAAACCATCTTaGCTAATAGGAAATGTTTTA +
Preference number: 4 (lower is better)
Translates to: LELTEKIGVKLPYWELKHQRKPS*LIGNVL
Trigger: TAAAACATTTCCTATTAGCCAAGATGGTTTCCTCTG...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGTATCGCGATACAACTTaGCAGATGATTCACGTAAGT +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWYRDTT*QMIHVS
Trigger: ACTTACGTGAATCATCTGCCAAGTTGTATCGCGATA...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTATCGCGATACAACTTaGCAGATGATTCACGTAAGT +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYYRDTT*QMIHVS
Trigger: ACTTACGTGAATCATCTGCCAAGTTGTATCGCGATA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCGTTACCATTTCTATTaGCGTTATGTCCACACAAGA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYRYHFY*RYVHTR
Trigger: TCTTGTGTGGACATAACGCCAATAGAAATGGTAACG...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp ATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTTCTTGCCATTGCTTTTaGTGTTTTAGACATGAAGTC +
Preference number: 4 (lower is better)
Translates to: MAGSNGISSSRSLRNRHTSCHCF*CFRHEV
Trigger: GACTTCATGTCTAAAACACCAAAAGCAATGGCAAGA...AGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550977.2
3UTR CAA 72 bp AACATGCGGTGTTTGATTTTTCGTCCTTGCGATAGTTaGCTGAGAATGATAGTTTCCAGCTTCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: NMRCLIFRPCDS*LRMIVSSFIHV
Trigger: GACATGGATGAAGCTGGAAACTATCATTCTCAGCAAACTATCGCAAGGACGAAAAATCAAACACCGCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATGAAACTGTATTGAACTaGATGGCAAGAGATACTAGT +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYETVLN*MARDTS
Trigger: ACTAGTATCTCTTGCCATTCAGTTCAATACAGTTTC...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCATGTGAAACTGTATTaGACTGAATGGCAAGAGATA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWHVKLY*TEWQEI
Trigger: TATCTCTTGCCATTCAGTTCAATACAGTTTCACATG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAGCACGTCTGGTTTTCTaGATATGTCATCAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKARLVF*ICHQEL
Trigger: AAGCTCTTGATGACATATTCAGAAAACCAGACGTGC...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATACCACAGATGAATGTTaGAATATTCTCGGGCATTTA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYTTDEC*NILGHL
Trigger: TAAATGCCCGAGAATATTTCAACATTCATCTGTGGT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTCAGTTAGAATGCTATaGGCCCGAGTTAACAAATTT +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYSVRML*ARVNKF
Trigger: AAATTTGTTAACTCGGGCTCATAGCATTCTAACTGA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGTTTTGGCCAATAACATaGCATGGGGAAGATAGATAT +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWFWPIT*HGEDRY
Trigger: ATATCTATCTTCCCCATGTCATGTTATTGGCCAAAA...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCACTTAACCGTAATGTaGCTTCTGCCACTACCACAA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYHLTVM*LLPLPQ
Trigger: TTGTGGTAGTGGCAGAAGTCACATTACGGTTAAGTG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp TATACGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACACTTGGCTTGGATTGCTTTGTCAGTTTaGGTAGGTGTGTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: YTCHIFLIQSIIVGHLAWIALSV*VGVSPT
Trigger: TGTTGGAGACACACCTACTCAAACTGACAAAGCAAT...CCAAGCCAAGTGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp ATTCTTCCTATCCCTAAGCATGGAATGTTCTTCCACTGGTTTGTATCCTCTTTTCTTTCACGGCACCTTTaGCCGACCAATTCAAAACTA +
Preference number: 4 (lower is better)
Translates to: ILPIPKHGMFFHWFVSSFLSRHL*PTNSKL
Trigger: TAGTTTTGAATTGGTCGGTCAAAGGTGCCGTGAAAG...AAAAGAGGATACAAACCAGTGGAAGAACATTCCATGCTTAGGGATAGGAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCTTTCACGGCACCTTTaGCCGACCAATTCAAAACTA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYLSRHL*PTNSKL
Trigger: TAGTTTTGAATTGGTCGGTCAAAGGTGCCGTGAAAG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAGATACAGGTTCATCTaGGCTCTCCAGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIRYRFI*ALQGIS
Trigger: AGAGATGCCCTGGAGAGCTCAGATGAACCTGTATCT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGATACAGGTTCATCTaGGCTCTCCAGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYRYRFI*ALQGIS
Trigger: AGAGATGCCCTGGAGAGCTCAGATGAACCTGTATCT...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCAAGACATTGAATCATaGCTACTTCTTCTCACCAAA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWQDIES*LLLLTK
Trigger: TTTGGTGAGAAGAAGTAGTCATGATTCAATGTCTTG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATACAAATGAGAGCGAGCTaGGGAGATATACAGACCTGG +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIQMRAS*GDIQTW
Trigger: CCAGGTCTGTATATCTCCTCAGCTCGCTCTCATTTG...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGACCATTTTCACGATATTaGTTCTTCCTATCCCTAAGC +
Preference number: 4 (lower is better)
Translates to: GYIPSNGMAGSNGISSSRPFSRY*FFLSLS
Trigger: GCTTAGGGATAGGAAGAATCAATATCGTGAAAATGG...TCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR GCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCATTACACACAAATTTaGTCCTCGGTCCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWHYTQI*SSVLFF
Trigger: AAAGAAAAGGACCGAGGAGCAAATTTGTGTGTAATG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGACATCATCCAAAGGATaGTCAAAGGTAAGACTAGAA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWTSSKG*SKVRLE
Trigger: TTCTAGTCTTACCTTTGAGCATCCTTTGGATGATGT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATAGTGGCTTTATAGCCTaGAGGTATTGGACAAGGCAT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYSGFIA*RYWTRH
Trigger: ATGCCTTGTCCAATACCTGCAGGCTATAAAGCCACT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGAATTGTAACCAGAACTaGAGGCAAGCCTTTATTTCT +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWNCNQN*RQAFIS
Trigger: AGAAATAAAGGCTTGCCTGCAGTTCTGGTTACAATT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGTAGAAAATACTATTaGAGCACTGTATGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVCRKYY*STVCRP
Trigger: CGGGCGGCATACAGTGCTGCAATAGTATTTTCTACA...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCTTTCACAATTCCAATaGCATGAATCTGTGCAACAA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWLSQFQ*HESVQQ
Trigger: TTGTTGCACAGATTCATGGCATTGGAATTGTGAAAG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATAGCTTCACTGACCTGTaGAGCAGCTCTTATTGCAAT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYSFTDL*SSSYCN
Trigger: ATTGCAATAAGAGCTGCTGCACAGGTCAGTGAAGCT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAAGCTTCACTGACCTGTaGAGCAGCTCTTATTGCAAT +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVSFTDL*SSSYCN
Trigger: ATTGCAATAAGAGCTGCTGCACAGGTCAGTGAAGCT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp TATACGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACACTTGGCTTGGTCAGGCAGTAGTATCTaGTGTGGCTTCTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: YTCHIFLIQSIIVGHLAWSGSSI*CGFLVF
Trigger: AAAGACTAAGAAGCCACAGCAGATACTACTGCCTGA...CCAAGCCAAGTGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR GCA 90 bp GGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCTCTTTGTTGCATTTCTaGACTTCTTCCAATTTCCAT +
Preference number: 4 (lower is better)
Translates to: GSNGISSSRSLRNRHTDFSLLHF*TSSNFH
Trigger: ATGGAAATTGGAAGAAGTGCAGAAATGCAACAAAGA...GAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR GCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTCTTTGTTTGAAGCTTaGGTTACCATTTCTATTGGC +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYSLFEA*VTISIG
Trigger: GCCAATAGAAATGGTAACGCAAGCTTCAAACAAAGA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGTCTTTGTTTGAAGCTTaGGTTACCATTTCTATTGGC +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWSLFEA*VTISIG
Trigger: GCCAATAGAAATGGTAACGCAAGCTTCAAACAAAGA...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAAGTGACAGAAGTTCCTaGAGAGACAGGATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVSDRSS*RDRILC
Trigger: ACAGAGAATCCTGTCTCTCCAGGAACTTCTGTCACT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGAGAAGAATCCTCCTCTaGCATTTCTTCTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWRRILL*HFFLFI
Trigger: AATGAACAAGAAGAAATGCCAGAGGAGGATTCTTCT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGCACGTCTGGTTTTCTaGATATGTCATCAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYARLVF*ICHQEL
Trigger: AAGCTCTTGATGACATATTCAGAAAACCAGACGTGC...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATACCAGATGCCAACTCTTaGCAGAAACTCCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIPDANS*QKLLTV
Trigger: TACAGTGAGGAGTTTCTGTCAAGAGTTGGCATCTGG...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAACATCTTTATTTTCAGTaGCAGAAGTTCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKHLYFQ*QKFLER
Trigger: TCTCTCCAGGAACTTCTGTCACTGAAAATAAAGATG...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCACCTCAACCACAGATaGATGTTGAAATATTCTCGG +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYHLNHR*MLKYSR
Trigger: CCGAGAATATTTCAACATTCATCTGTGGTTGAGGTG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAAAGAGGGAGATTCCTTaGATTTCTCAGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKKREIP*ISQLWL
Trigger: TAACCAAAGCTGAGAAATTCAAGGAATCTCCCTCTT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTTGCCACTCAAAGCATaGAATGTAAGTCCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYLPLKA*NVSPAV
Trigger: AACTGCTGGACTTACATTTCATGCTTTGAGTGGCAA...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACAAAGACTCCTCTTTTaGAGATCATCACTGCCATCT +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVQRLLF*RSSLPS
Trigger: AGATGGCAGTGATGATCTTCAAAAGAGGAGTCTTTG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATCAGCTTCAATCCTCTaGATTAAGGAATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKSASIL*IKEYAS
Trigger: GGAAGCATATTCCTTAATTCAGAGGATTGAAGCTGA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATTGCTTTGTCAGTTTaGGTAGGTGTGTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYIALSV*VGVSPT
Trigger: TGTTGGAGACACACCTACTCAAACTGACAAAGCAAT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAAGTTGTAAAGGGATGTaGGAAGTGTATCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVSCKGM*EVYHLA
Trigger: TGCCAGATGATACACTTCTCACATCCCTTTACAACT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGGCAAGATCCAAGTTTaGACTAGAGGCTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIGKIQV*TRGFCA
Trigger: TGCACAGAAGCCTCTAGTTCAAACTTGGATCTTGCC...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp ATTCTTCCTATCCCTAAGCATGGAATGTTCTTCCACTGGTTTGTATCCTCTTTTATGGGAGTTCACTCATaGTTTGGCTCTTTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: ILPIPKHGMFFHWFVSSFMGVHS*FGSLFV
Trigger: GACAAACAAAGAGCCAAATCATGAGTGAACTCCCAT...AAAAGAGGATACAAACCAGTGGAAGAACATTCCATGCTTAGGGATAGGAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTGGGTATTTTATTCTCTTTGCACCTCTTGTTTCCTaGCTTTTTAATGATCGCCAT +
Preference number: 4 (lower is better)
Translates to: KRSFTSLVSWIPGYFILFAPLVS*LFNDRH
Trigger: ATGGCGATCATTAAAAAGTCAGGAAACAAGAGGTGC...AAAGAGAATAAAATACCCAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR GCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAACCATTGCTCTCCTaGAGTATAAAAAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWEPLLS*SIKRFS
Trigger: TGAAAATCTTTTTATACTGCAGGAGAGCAATGGTTC...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGCAAATCTGTGCAGTTaGTTGTTGCTTCAATGGTTG +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYANLCS*LLLQWL
Trigger: CAACCATTGAAGCAACAAGCAACTGCACAGATTTGC...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATGCAAACACCCCCAGATaGCAACTCTTGACAGAAACT +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYANTPR*QLLTET
Trigger: AGTTTCTGTCAAGAGTTGGCATCTGGGGGTGTTTGC...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATAGAACTATTAGGTTTTaGCTAACAAAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYRTIRF*LTKCSS
Trigger: TGAACTGCACTTTGTTAGGCAAAACCTAATAGTTCT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTCAGGCAGTAGTATCTaGTGTGGCTTCTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYSGSSI*CGFLVF
Trigger: AAAGACTAAGAAGCCACAGCAGATACTACTGCCTGA...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGTCAGATGTAACATATTaGTTTGTCAGTTTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWSDVTY*FVSLSR
Trigger: CCTACTCAAACTGACAAAGCAATATGTTACATCTGA...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATACATGTGCACAATGTaGAGGTTTGTTACATACGTA +
Preference number: 4 (lower is better)
Translates to: GYIPSNGMAGSNGISSSRYMCTM*RFVTYV
Trigger: TACGTATGTAACAAACCTGCACATTGTGCACATGTA...TCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATCTTGCACAAGGTTGTTaGGTAATATCTGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYLAQGC*VISGPL
Trigger: CAAGGGCCCAGATATTACCCAACAACCTTGTGCAAG...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATGCAAAGATGCTCTTGTaGCAGAGCCACTTGCATGAT +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYAKMLL*QSHLHD
Trigger: ATCATGCAAGTGGCTCTGCCACAAGAGCATCTTTGC...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAACACATTCAATCAGTCTaGCAATTTGTTGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKHIQSV*QFVEMG
Trigger: TCCCATCTCAACAAATTGCCAGACTGATTGAATGTG...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACAGAGACTTGCATCCTaGTGTGATGTCCAACATTTT +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVQRLAS*CDVQHF
Trigger: AAAATGTTGGACATCACACCAGGATGCAAGTCTCTG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTCAAGTGATAGACGATaGAACCTCTTTCTTTTAACA +
Preference number: 4 (lower is better)
Translates to: TYEAAAGQLINSEISKQYSSDRR*NLFLLT
Trigger: TGTTAAAAGAAAGAGGTTCCATCGTCTATCACTTGA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp ATTCTTCCTATCCCTAAGCATGGAATGTTCTTCCACTGGTTTGTATCCTCTTTTGTTGGACACTTGGCTTaGTTCCAAGTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: ILPIPKHGMFFHWFVSSFVGHLA*FQVFAI
Trigger: AATAGCAAAGACTTGGAACCAAGCCAAGTGTCCAAC...AAAAGAGGATACAAACCAGTGGAAGAACATTCCATGCTTAGGGATAGGAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATGAGAAGACTTCCAAGTaGATGCAACGCCTGAACTTT +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYEKTSK*MQRLNF
Trigger: AAAGTTCAGGCGTTGCATTCACTTGGAAGTCTTCTC...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGAGAAGACTTCCAAGTaGATGCAACGCCTGAACTTT +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIEKTSK*MQRLNF
Trigger: AAAGTTCAGGCGTTGCATTCACTTGGAAGTCTTCTC...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCTTTTCTGCGAAGATaGGAAGACTTCCAAGTGAAT +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVSFLRR*EDFQVN
Trigger: ATTCACTTGGAAGTCTTCTCATCTTCGCAGAAAAGA...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATACTATCTTTGCTGATATaGCTGCTCCTTGCAAACACC +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYILSLLI*LLLANT
Trigger: GGTGTTTGCAAGGAGCAGTCATATCAGCAAAGATAG...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAACAATTCCAATGCCATaGATCTGTGCAACAAATGCA +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVTIPMP*ICATNA
Trigger: TGCATTTGTTGCACAGATTCATGGCATTGGAATTGT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAAGGGTTAGCCGTGATTaGGGAGAAATAAATTCATTT +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKRVSRD*GEINSF
Trigger: AAATGAATTTATTTCTCCTCAATCACGGCTAACCCT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATAAGAGGGAGATTCCTTaGATTTCTCAGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYKREIP*ISQLWL
Trigger: TAACCAAAGCTGAGAAATTCAAGGAATCTCCCTCTT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAGTCATATTCCCTCCATaGACGAAGAATCTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKVIFPP*TKNLCY
Trigger: ATAACAAAGATTCTTCGTTCATGGAGGGAATATGAC...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATCTTTCACGGCACCTTTaGCCGACCAATTCAAAACTA +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYLSRHL*PTNSKL
Trigger: TAGTTTTGAATTGGTCGGTCAAAGGTGCCGTGAAAG...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAACTGACCATCATATGTaGTGTGCCAAATTTCATCTT +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKTDHHM*CAKFHL
Trigger: AAGATGAAATTTGGCACATCACATATGATGGTCAGT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATGAATATAGACGGCAGTaGGATATCAAATGGGACCTC +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYEYRRQ*DIKWDL
Trigger: GAGGTCCCATTTGATATCTCACTGCCGTCTATATTC...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCTAACAGTTGGAGTCTaGAAAACTTGCAATTTGTCC +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYLTVGV*KTCNLS
Trigger: GGACAAATTGCAAGTTTTGCAGACTCCAACTGTTAG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp GGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGAAAGACACTCAGTAAGTaGTTAAAAATGTCTGACCAT +
Preference number: 4 (lower is better)
Translates to: GYIPSNGMAGSNGISSSRKTLSK*LKMSDH
Trigger: ATGGTCAGACATTTTTAAGCACTTACTGAGTGTCTT...TCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTGCATACACCAGAAGTaGTGTCACTTGTTCTGTATA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYCIHQK*CHLFCI
Trigger: TATACAGAACAAGTGACACCACTTCTGGTGTATGCA...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTTGTTGGGTAATATCTaGGCCCTTGAACTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYLLGNI*ALELLY
Trigger: ATACAGAAGTTCAAGGGCCCAGATATTACCCAACAA...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGTGACAGAAGTTCCTaGAGAGACAGGATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYSDRSS*RDRILC
Trigger: ACAGAGAATCCTGTCTCTCCAGGAACTTCTGTCACT...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAGCCTAACAACTCCTaGATCTCCTTCTCACAAGAG +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYKPNNS*ISFSQE
Trigger: CTCTTGTGAGAAGGAGATCCAGGAGTTGTTAGGCTT...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAAAGATATGCAGACACTaGACCACAGATTCTTTATTC +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKKICRH*TTDSLF
Trigger: GAATAAAGAATCTGTGGTCCAGTGTCTGCATATCTT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGGGATAAACCAGAATTaGTTTAGTTGTCTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYGINQN*FSCLPN
Trigger: ATTGGGGAGACAACTAAACCAATTCTGGTTTATCCC...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATTGTTCATCCTGAAGTaGCGAAGCAACAAAATAATC +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKLFILK*RSNKII
Trigger: GATTATTTTGTTGCTTCGCCACTTCAGGATGAACAA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCGTTACCATTTCTATTaGCGTTATGTCCACACAAGA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYRYHFY*RYVHTR
Trigger: TCTTGTGTGGACATAACGCCAATAGAAATGGTAACG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp GATGGCATTGAATCTATAAATTACCTAGGCAGTATGGCCATTTTCACGATATTGTCATTGTTGGACACTTaGCTTGGTTCCAAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: DGIESINYLGSMAIFTILSLLDT*LGSKSL
Trigger: CAAAGACTTGGAACCAAGCCAAGTGTCCAACAATGA...CAATATCGTGAAAATGGCCATACTGCCTAGGTAATTTATAGATTCAATGCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CCA 90 bp ATTCTTCCTATCCCTAAGCATGGAATGTTCTTCCACTGGTTTGTATCCTCTTTTCTGCATAGTATTCCATaGTGTATACGTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: ILPIPKHGMFFHWFVSSFLHSIP*CIRATF
Trigger: AAATGTGGCACGTATACACCATGGAATACTATGCAG...AAAAGAGGATACAAACCAGTGGAAGAACATTCCATGCTTAGGGATAGGAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATATCTGCTGTGTCGGATTaGTCTGTTATGGTATTTGGA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYISAVSD*SVMVFG
Trigger: TCCAAATACCATAACAGATCAATCCGACACAGCAGA...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATTTGTGCTATCTTTGCTaGTATGACTGCTCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYLCYLC*YDCSLQ
Trigger: TTGCAAGGAGCAGTCATATCAGCAAAGATAGCACAA...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTCAGTTAGAATGCTATaGGCCCGAGTTAACAAATTT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYSVRML*ARVNKF
Trigger: AAATTTGTTAACTCGGGCTCATAGCATTCTAACTGA...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAGATATATTGAGCCGCTaGATTCCTAATTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVDILSR*IPNLHF
Trigger: GAAATGCAAATTAGGAATTCAGCGGCTCAATATATC...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCATTTCTGGATATATTaGGCCGCTGAATTCCTAATT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYHFWIY*AAEFLI
Trigger: AATTAGGAATTCAGCGGCTCAATATATCCAGAAATG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATACTGACCATCATATGTaGTGTGCCAAATTTCATCTT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYTDHHM*CAKFHL
Trigger: AAGATGAAATTTGGCACATCACATATGATGGTCAGT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATACATGTTAGGATCACATaGTCGGAAACTGACCATCAT +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIHVRIT*SETDHH
Trigger: ATGATGGTCAGTTTCCGATCATGTGATCCTAACATG...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAGGAGGAATGTACCATTaGAAGCAAAGTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVGGMYH*KQSSLF
Trigger: AAACAAAGAACTTTGCTTTCAATGGTACATTCCTCC...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AATTGTGAATGGGAGTTCACTCATGATTTGGCTCTTTGTTTGTCTGTTATTGGTGTGCTTAAAAATGTCTaGCCATCATATGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: NCEWEFTHDLALCLSVIGVLKNV*PSYVMC
Trigger: GCACATCACATATGATGGTCAGACATTTTTAAGCAC...ACCAATAACAGACAAACAAAGAGCCAAATCATGAGTGAACTCCCATTCACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR GCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGCAAATCTGTGCAGTTaGTTGTTGCTTCAATGGTTG +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIANLCS*LLLQWL
Trigger: CAACCATTGAAGCAACAAGCAACTGCACAGATTTGC...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATAATTGTAACCAGAACTaGAGGCAAGCCTTTATTTCT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYNCNQN*RQAFIS
Trigger: AGAAATAAAGGCTTGCCTGCAGTTCTGGTTACAATT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCTTTCACAATTCCAATaGCATGAATCTGTGCAACAA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYLSQFQ*HESVQQ
Trigger: TTGTTGCACAGATTCATGGCATTGGAATTGTGAAAG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAACTTCCTTCTGCTTTaGAACCCAAAATGCAGTACC +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYINFLLL*NPKCST
Trigger: GGTACTGCATTTTGGGTTGCAAAGCAGAAGGAAGTT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAATACTTGGTAGTCCTTaGAAAACCACTATACACTTT +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKILGSP*KTTIHF
Trigger: AAAGTGTATAGTGGTTTTGCAAGGACTACCAAGTAT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATATCAGGCAGTAGTATCTaGTGTGGCTTCTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYISGSSI*CGFLVF
Trigger: AAAGACTAAGAAGCCACAGCAGATACTACTGCCTGA...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATCAGATGTAACATATTaGTTTGTCAGTTTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKSDVTY*FVSLSR
Trigger: CCTACTCAAACTGACAAAGCAATATGTTACATCTGA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATCTTTGTTGCATTTCTaGACTTCTTCCAATTTCCAT +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKSLLHF*TSSNFH
Trigger: ATGGAAATTGGAAGAAGTGCAGAAATGCAACAAAGA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTTTAAGAGATGTGGTTaGCCAATTGTAACCAGAACT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYFKRCG*PIVTRT
Trigger: AGTTCTGGTTACAATTGGCCAACCACATCTCTTAAA...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATCTTCGCGATTCTTCCTaGGATTTTGAGGAACTCATT +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYLRDSS*DFEELI
Trigger: AATGAGTTCCTCAAAATCCCAGGAAGAATCGCGAAG...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAAAGGTTGCTGCCAAATaGAAAATATCCTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKKVAAK*KISSEY
Trigger: ATATTCAGAGGATATTTTCCATTTGGCAGCAACCTT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATACTTGAAGGGCATAGCTaGAATCATTTAGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYILEGHS*NHLGSC
Trigger: GCAACTTCCTAAATGATTCCAGCTATGCCCTTCAAG...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAGAGAAGTGTATCATCTaGCAAAGAAATTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVEKCII*QRNSRY
Trigger: GTATCTGGAATTTCTTTGCCAGATGATACACTTCTC...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp GTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGATTTTTCCCATTTGTCAATTTTaGCTTTTCTTGCCATTGCTT +
Preference number: 4 (lower is better)
Translates to: VLIVQFPPMSENMRCLIFPICQF*LFLPLL
Trigger: AAGCAATGGCAAGAAAAGCCAAAATTGACAAATGGG...AAAAATCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAACAGCTTGGAACACTaGATTCTCCTTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYNSLEH*ILLCLQ
Trigger: TTGAAGACAAAGGAGAATTCAGTGTTCCAAGCTGTT...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATACTTTAAGACTTCTTTaGTTGCTGGCTTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYTLRLL*LLAWRT
Trigger: TGTTCTCCAAGCCAGCAATCAAAGAAGTCTTAAAGT...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAATGTCATCAAGAGCTTaGCACCAACACTTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIMSSRA*HQHLKA
Trigger: TGCTTTTAAGTGTTGGTGTCAAGCTCTTGATGACAT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATGATGCAAATCCATCATaGAACTATTTGAGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYDANPS*NYLRQV
Trigger: CACTTGCCTCAAATAGTTTCATGATGGATTTGCATC...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAGGTACAAGAGGATTaGAGAAGTCTCTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYKVQED*RSLCQN
Trigger: ATTTTGGCAGAGACTTCTTCAATCCTCTTGTACCTT...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGCAAAGTTCTTTGTTTaGAGCTTGCGTTACCATTTC +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIAKFFV*SLRYHF
Trigger: GAAATGGTAACGCAAGCTTCAAACAAAGAACTTTGC...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATGGAATGTCTAACATCTaGAATCTTCAGAGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYGMSNI*NLQRLQ
Trigger: TTGAAGCCTCTGAAGATTTCAGATGTTAGACATTCC...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATGTGCAAGCAAGACATTaGATCATGACTACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYVQARH*IMTTSS
Trigger: AGAAGAAGTAGTCATGATTCAATGTCTTGCTTGCAC...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAGAACCATTGCTCTCCTaGAGTATAAAAAGATTTTCA +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVEPLLS*SIKRFS
Trigger: TGAAAATCTTTTTATACTGCAGGAGAGCAATGGTTC...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGAATTAATCTTAAGCTaGTTCCCAATGAAATTTCGG +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYELILS*FPMKFR
Trigger: CCGAAATTTCATTGGGAAGCAGCTTAAGATTAATTC...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAGAATTAATCTTAAGCTaGTTCCCAATGAAATTTCGG +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVELILS*FPMKFR
Trigger: CCGAAATTTCATTGGGAAGCAGCTTAAGATTAATTC...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAATGAAAGCAACTTTCTaGTGTGTCGGATTGATCTGT +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIMKATF*CVGLIC
Trigger: ACAGATCAATCCGACACAGCAGAAAGTTGCTTTCAT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATTCTGTTCAGTTAGAATaGTATGAGCCCGAGTTAACA +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYSVQLE*YEPELT
Trigger: TGTTAACTCGGGCTCATAGCATTCTAACTGAACAGA...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTCTTTGTTGCATTTCTaGACTTCTTCCAATTTCCAT +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYSLLHF*TSSNFH
Trigger: ATGGAAATTGGAAGAAGTGCAGAAATGCAACAAAGA...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACTTCTTATTCTTTGTTaGATTTCTGCACTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVLLILC*ISALLP
Trigger: TGGAAGAAGTGCAGAAATGCAACAAAGAATAAGAAG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGATTTTTCTTCTTATTCTTTGTTaGATTTCTGCACTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VLIVQFPPMSENMRCLIFLLILC*ISALLP
Trigger: TGGAAGAAGTGCAGAAATGCAACAAAGAATAAGAAG...AAAAATCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR GCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCTTCTTATTCTTTGTTaGATTTCTGCACTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYLLILC*ISALLP
Trigger: TGGAAGAAGTGCAGAAATGCAACAAAGAATAAGAAG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp ATAAATTACCTAGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTATCCCTTTGATTTTTCGTCCTTaGGATAGTTTGCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: INYLGSMAIFTILILPIPLIFRP*DSLLRM
Trigger: CATTCTCAGCAAACTATCGCAAGGACGAAAAATCAA...AGGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCTAGGTAATTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CCA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCAGAGGAAACCATCTTaGCTAATAGGAAATGTTTTA +
Preference number: 4 (lower is better)
Translates to: AGQLINSEISKQYLEYLYQRKPS*LIGNVL
Trigger: TAAAACATTTCCTATTAGCCAAGATGGTTTCCTCTG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATATTGTTGGGTAATATCTaGGCCCTTGAACTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYILLGNI*ALELLY
Trigger: ATACAGAAGTTCAAGGGCCCAGATATTACCCAACAA...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATACACATTCAATCAGTCTaGCAATTTGTTGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIHIQSV*QFVEMG
Trigger: TCCCATCTCAACAAATTGCCAGACTGATTGAATGTG...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTGGGTATTTTATTCTCTTTTCAAGTGATAGACGATaGAACCTCTTTCTTTTAACA +
Preference number: 4 (lower is better)
Translates to: KRSFTSLVSWIPGYFILFSSDRR*NLFLLT
Trigger: TGTTAAAAGAAAGAGGTTCCATCGTCTATCACTTGA...AAAGAGAATAAAATACCCAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CCA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCAAGTGATAGACGATaGAACCTCTTTCTTTTAACA +
Preference number: 4 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVSSDRR*NLFLLT
Trigger: TGTTAAAAGAAAGAGGTTCCATCGTCTATCACTTGA...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAATGCACTTCTTTCTaGCGCAAAATCAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYKCTSF*RKINSE
Trigger: CTCTGAGTTGATTTTGCGCCAGAAAGAAGTGCATTT...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAAATGCACTTCTTTCTaGCGCAAAATCAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIKCTSF*RKINSE
Trigger: CTCTGAGTTGATTTTGCGCCAGAAAGAAGTGCATTT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CCA 90 bp GTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGATTTTTACATCCCTTGTAAGTTaGATTCCTGGGTATTTTATT +
Preference number: 4 (lower is better)
Translates to: VLIVQFPPMSENMRCLIFTSLVS*IPGYFI
Trigger: AATAAAATACCCAGGAATCCAACTTACAAGGGATGT...AAAAATCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAACCACAGATGAATGTTaGAATATTCTCGGGCATTTA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYITTDEC*NILGHL
Trigger: TAAATGCCCGAGAATATTTCAACATTCATCTGTGGT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAGGGTTAGCCGTGATTaGGGAGAAATAAATTCATTT +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIRVSRD*GEINSF
Trigger: AAATGAATTTATTTCTCCTCAATCACGGCTAACCCT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATACATCATGAAACTATTTaGGGCAAGTGGTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIHHETI*GKWFVS
Trigger: ACTTACAAACCACTTGCCTCAAATAGTTTCATGATG...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR TCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAATAATCCCAAACTGGTaGGAAAACTTTCTTAGCCAA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIIIPNW*ENFLSQ
Trigger: TTGGCTAAGAAAGTTTTCTCACCAGTTTGGGATTAT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATACAGACATACAAGGTTaGTGCCAAATGGAAAATATC +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYTDIQG*CQMENI
Trigger: GATATTTTCCATTTGGCAGCAACCTTGTATGTCTGT...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR GCA 90 bp AATTGTGAATGGGAGTTCACTCATGATTTGGCTCTTTGTTTGTCTGTTATTGGTTCAGATGTAACATATTaGTTTGTCAGTTTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: NCEWEFTHDLALCLSVIGSDVTY*FVSLSR
Trigger: CCTACTCAAACTGACAAAGCAATATGTTACATCTGA...ACCAATAACAGACAAACAAAGAGCCAAATCATGAGTGAACTCCCATTCACAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR GCA 90 bp ATAAATTACCTAGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTATCCCTATTGTGGTTTTGATTTaGATTTTTCTGATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: INYLGSMAIFTILILPIPIVVLI*IFLMAS
Trigger: ACTGGCCATCAGAAAAATGCAAATCAAAACCACAAT...AGGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCTAGGTAATTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CCA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGAAGAATCCTCCTCTaGCATTTCTTCTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYRRILL*HFFLFI
Trigger: AATGAACAAGAAGAAATGCCAGAGGAGGATTCTTCT...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
3UTR CAA 72 bp AGTTCACTCATGATTTGGCTCTTTGTTTGTCTGTTATaGGTGTATAAGAATGCTTGTGCTTTTTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: SSLMIWLFVCLL*VYKNACAFCSL
Trigger: CAATGAGCAAAAAGCACAAGCATTCTTATACACCAATAACAGACAAACAAAGAGCCAAATCATGAGTGAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR GCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATATTTTTAGCAAATCTGTaGAGTTGCTTGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIFLANL*SCLLLQ
Trigger: TTGAAGCAACAAGCAACTGCACAGATTTGCTAAAAA...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR GCA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAGAACTATTAGGTTTTaGCTAACAAAGTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GQLINSEISKQYLEYLYIRTIRF*LTKCSS
Trigger: TGAACTGCACTTTGTTAGGCAAAACCTAATAGTTCT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS CCA 90 bp GCAGGTCCACTGAAGCAGCGAGCTCCGGGAGCTCCCCTTCGACTCTaGGGGCGACCTCGAAGTCGCGGTGGAGGTCGGCGGCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: AGPLKQRAPGAPLRL*GRPRSRGGGRRQFW
Trigger: CCAGAACTGCCGCCGACCTCCACCGCGACTTCGAGGTCGCCCCCAGAGTCGAAGGGGAGCTCCCGGAGCTCGCTGCTTCAGTGGACCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS TCA 90 bp GGTCGGCGGCAGTTCTGGCAGAGACCCCGAGGTGGTAGAGTCGTCTaGCGGAGAGCTCGAGGGGGAGCCCTGCGCCGCCATATTGACGCG +
Preference number: 5 (lower is better)
Translates to: GRRQFWQRPRGGRVV*RRARGGALRRHIDA
Trigger: CGCGTCAATATGGCGGCGCAGGGCTCCCCCTCGAGCTCTCCGTCAGACGACTCTACCACCTCGGGGTCTCTGCCAGAACTGCCGCCGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS GCA 90 bp CCCGAGGTGGTAGAGTCGTCTGACGGAGAGCTCGAGGGGGAGCCCTaGGCCGCCATATTGACGCGCCCCGGCCCGCCTGGAGTATGTGTA +
Preference number: 5 (lower is better)
Translates to: PEVVESSDGELEGEP*AAILTRPGPPGVCV
Trigger: TACACATACTCCAGGCGGGCCGGGGCGCGTCAATATGGCGGCGCAGGGCTCCCCCTCGAGCTCTCCGTCAGACGACTCTACCACCTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553778.6
ENST00000554621.1
CDS TCA 90 bp GCACTGTATGCCGCCCGGTGCCTCTGCAGAGCAACTGCAGCCAGCTaGAGCCGGGCCTCCACCACAATCTCCAGCTCGCCAGCGGAGCAC +
Preference number: 5 (lower is better)
Translates to: ALYAARCLCRATAAS*SRASTTISSSPAEH
Trigger: GTGCTCCGCTGGCGAGCTGGAGATTGTGGTGGAGGCCCGGCTTCAGCTGGCTGCAGTTGCTCTGCAGAGGCACCGGGCGGCATACAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCCCTGCGCCGCCATATaGACGCGCCCCGGCCCGCCT +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWPCAAI*TRPGPP
Trigger: AGGCGGGCCGGGGCGCGTCAATATGGCGGCGCAGGG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS TCA 90 bp GCAAACAGCTGTGTAGAGAGTAGCGCGCCATGTCAAGTACCTGAGTaGCAGGAGCGGGACCAAGGACTCCATACACATGCTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: ANSCVESSAPCQVPE*QERDQGLHTHAGPQ
Trigger: CTGTGGGCCAGCATGTGTATGGAGTCCTTGGTCCCGCTCCTGTCACTCAGGTACTTGACATGGCGCGCTACTCTCTACACAGCTGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS CCA 90 bp GTGGTGGCTAAAGCCTTCTTTTTCCTCATAAAGCCTAACAACTCCTaGATCTCCTTCTCACAAGAGGCCAGGAGCGGGTTTTTCGCGTCC +
Preference number: 5 (lower is better)
Translates to: VVAKAFFFLIKPNNS*ISFSQEARSGFFAS
Trigger: GGACGCGAAAAACCCGCTCCTGGCCTCTTGTGAGAAGGAGATCCAGGAGTTGTTAGGCTTTATGAGGAAAAAGAAGGCTTTAGCCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS GCA 90 bp TTGCGTCAAGAATTCAGCCTGCAGTTCCGTGTCCCCTGCGCTTTTTaGCTCCATACACACTTCATTGATGAGGCTCAGGCAATCTGTCAT +
Preference number: 5 (lower is better)
Translates to: LRQEFSLQFRVPCAF*LHTHFIDEAQAICH
Trigger: ATGACAGATTGCCTGAGCCTCATCAATGAAGTGTGTATGGAGGCAAAAAGCGCAGGGGACACGGAACTGCAGGCTGAATTCTTGACGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS GCA 90 bp AATTACAGCTTGCGTCAAGAATTCAGCCTGCAGTTCCGTGTCCCCTaGGCTTTTTGCCTCCATACACACTTCATTGATGAGGCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: NYSLRQEFSLQFRVP*AFCLHTHFIDEAQA
Trigger: TGCCTGAGCCTCATCAATGAAGTGTGTATGGAGGCAAAAAGCGCAGGGGACACGGAACTGCAGGCTGAATTCTTGACGCAAGCTGTAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGTTCCTCCACTGCTGTaGTTCTACAGAGCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELVPPLL*FYRASV
Trigger: CACTGAAGCTCTGTAGAACAACAGCAGTGGAGGAAC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS GCA 90 bp CCATTGAAGATAATCCAGCAAAGATGCTCTTGTGGCAGAGCCACTTaGATGATGAGCCTTAAGGAGGACAAGATATGCAGACACTGGACC +
Preference number: 5 (lower is better)
Translates to: PLKIIQQRCSCGRAT*MMSLKEDKICRHWT
Trigger: GGTCCAGTGTCTGCATATCTTGTCCTCCTTAAGGCTCATCATGCAAGTGGCTCTGCCACAAGAGCATCTTTGCTGGATTATCTTCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS CCA 90 bp TGGGTAATATCTGGGCCCTTGAACTTCTGTATTCTCAGCAGAAGCTaGCGCTGTGCATACACCAGAAGTGGTGTCACTTGTTCTGTATAC +
Preference number: 5 (lower is better)
Translates to: WVISGPLNFCILSRS*RCAYTRSGVTCSVY
Trigger: GTATACAGAACAAGTGACACCACTTCTGGTGTATGCACAGCGCCAGCTTCTGCTGAGAATACAGAAGTTCAAGGGCCCAGATATTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACATACCTTGCACAAGGTaGTTGGGTAATATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LELTEKIGVKLPYWELKHIPCTR*LGNIWA
Trigger: GGCCCAGATATTACCCAACAACCTTGTGCAAGGTAT...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTCCATACACACTTCATaGATGAGGCTCAGGCAATCT +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELSIHTS*MRLRQS
Trigger: AGATTGCCTGAGCCTCATCAATGAAGTGTGTATGGA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACGTGCAGCAGCTCTTATaGCAATCCAGGCTAATGAAC +
Preference number: 5 (lower is better)
Translates to: LELTEKIGVKLPYWELKHVQQLL*QSRLMN
Trigger: GTTCATTAGCCTGGATTGCAATAAGAGCTGCTGCAC...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCCAGCAAAGATGCTCTaGTGGCAGAGCCACTTGCAT +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWPAKML*WQSHLH
Trigger: ATGCAAGTGGCTCTGCCACAAGAGCATCTTTGCTGG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACACATTGAGTCACAGCTaGAAGGGCATAGCTGGAATC +
Preference number: 5 (lower is better)
Translates to: LELTEKIGVKLPYWELKHTLSHS*KGIAGI
Trigger: GATTCCAGCTATGCCCTTCAAGCTGTGACTCAATGT...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGCGTTACCATTTCTATaGGCGTTATGTCCACACAAG +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELALPFL*ALCPHK
Trigger: CTTGTGTGGACATAACGCCAATAGAAATGGTAACGC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGATAGGTTCTGTCTCCTaGGGAGGTCTATCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWIGSVS*GGLSRG
Trigger: TCCCCTGGATAGACCTCCCAAGGAGACAGAACCTAT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS TCA 90 bp TCCACTGCTGTTGTTCTACAGAGCTTCAGTGCCACATCAAACAGATaGAGAGCAGGTAACCACTTCGAGGGGTCCTTCCTTTTATTCTTG +
Preference number: 5 (lower is better)
Translates to: STAVVLQSFSATSNR*RAGNHFEGSFLLFL
Trigger: CAAGAATAAAAGGAAGGACCCCTCGAAGTGGTTACCTGCTCTTCATCTGTTTGATGTGGCACTGAAGCTCTGTAGAACAACAGCAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGCCATTACACACAAATTaGCTCCTCGGTCCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELPLHTN*LLGPFL
Trigger: AAGAAAAGGACCGAGGAGCAAATTTGTGTGTAATGG...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTTCTGCTGTGTCGGATaGATCTGTTATGGTATTTGG +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELFCCVG*ICYGIW
Trigger: CCAAATACCATAACAGATCAATCCGACACAGCAGAA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGCTGAGTGATTTCATATaGAGCATAGCAACGTTCAGC +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELLSDFI*SIATFS
Trigger: GCTGAACGTTGCTATGCTCAATATGAAATCACTCAG...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGTGTCCCCTGCGCTTTTaGCCTCCATACACACTTCAT +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWCPLRF*PPYTLH
Trigger: ATGAAGTGTGTATGGAGGCAAAAAGCGCAGGGGACA...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATGCAAAACTAGGCTTCTaGCCAGGGTTAGCCGTGATT +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYAKLGF*PGLAVI
Trigger: AATCACGGCTAACCCTGGCAAGAAGCCTAGTTTTGC...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAATTTCTTTATCAGGTaGAACATCCTGGGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELNFFIR*NILGSS
Trigger: ACTGCTCCCCAGGATGTTCAACCTGATAAAGAAATT...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCCATCAAACAGAGACTaGCATCCTGGTGTGATGTCC +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYPSNRD*HPGVMS
Trigger: GGACATCACACCAGGATGCAAGTCTCTGTTTGATGG...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGATTGACACTATCCAGTaGAAAAGGCTTCCTCCTGAT +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELIDTIQ*KRLPPD
Trigger: ATCAGGAGGAAGCCTTTTCAACTGGATAGTGTCAAT...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS GCA 90 bp GCCTTTCTGAAAAAGGATTTCAGCTTCCACCTCATGTTCCTCCACTaGTGTTGTTCTACAGAGCTTCAGTGCCACATCAAACAGATGAAG +
Preference number: 5 (lower is better)
Translates to: AFLKKDFSFHLMFLH*CCSTELQCHIKQMK
Trigger: CTTCATCTGTTTGATGTGGCACTGAAGCTCTGTAGAACAACAGCAGTGGAGGAACATGAGGTGGAAGCTGAAATCCTTTTTCAGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CCA 90 bp GAACATCCGAGCAGTAATAGTAGAAAGAGGGGGATAAACCAGAATTaGTTTAGTTGTCTCCCCAATAGCACCACCGACAAGCTTTCCGTT +
Preference number: 5 (lower is better)
Translates to: EHPSSNSRKRGINQN*FSCLPNSTTDKLSV
Trigger: AACGGAAAGCTTGTCGGTGGTGCTATTGGGGAGACAACTAAACCAATTCTGGTTTATCCCCCTCTTTCTACTATTACTGCTCGGATGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000554108.6
CDS-3UTR CAA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACGATGAGCAAGAACCATaGCTCTCCTGCAGTATAAAA +
Preference number: 5 (lower is better)
Translates to: LELTEKIGVKLPYWELKHDEQEP*LSCSIK
Trigger: TTTTATACTGCAGGAGAGCAATGGTTCTTGCTCATC...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGCAGAGGAAACCATCTaGGCTAATAGGAAATGTTTT +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELAEETI*ANRKCF
Trigger: AAAACATTTCCTATTAGCCAAGATGGTTTCCTCTGC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAACGCAGACAAGCGCTTaGGCTCGGCTGTATTCTGAA +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKTQTSA*ARLYSE
Trigger: TTCAGAATACAGCCGAGCCAAAGCGCTTGTCTGCGT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTATGTCATCAAGAGCTaGACACCAACACTTAAAAGC +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELYVIKS*TPTLKS
Trigger: GCTTTTAAGTGTTGGTGTCAAGCTCTTGATGACATA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCTGGGACACAATTTATaGTCGCAGCCACACTTAGGA +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWLGHNL*SQPHLG
Trigger: TCCTAAGTGTGGCTGCGACAATAAATTGTGTCCCAG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGATATCTCTTCCAAGTTaGGTAGGTTTGGTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELISLPS*VGLVCS
Trigger: AGAGCAAACCAAACCTACCAAACTTGGAAGAGATAT...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGTTACTGATGATCCATTaGGCAAAGAGGTTAACATGC +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELLLMIH*AKRLTC
Trigger: GCATGTTAACCTCTTTGCCAAATGGATCATCAGTAA...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACTGCAAAACTTGCAATTaGTCCAGAAGCACAACAGCT +
Preference number: 5 (lower is better)
Translates to: LELTEKIGVKLPYWELKHCKTCN*SRSTTA
Trigger: AGCTGTTGTGCTTCTGGACAAATTGCAAGTTTTGCA...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAACTTTTCCGGACCCTaGGTAGAAATATCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELNFSGP*VEISLL
Trigger: TAGCAAAGATATTTCTACCAAGGGTCCGGAAAAGTT...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS TCA 90 bp CCCTGTATCTATCTGAGAAGAGTTCAATGCCTGGGAGAAGCTGAGTaGTTTCATATTGAGCATAGCAACGTTCAGCTTTGGGATGTGGAA +
Preference number: 5 (lower is better)
Translates to: PCIYLRRVQCLGEAE*FHIEHSNVQLWDVE
Trigger: TTCCACATCCCAAAGCTGAACGTTGCTATGCTCAATATGAAATCACTCAGCTTCTCCCAGGCATTGAACTCTTCTCAGATAGATACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS TCA 90 bp CACTTCATCTGTAACAATGGGTCCAGTTTGCAGTATTCGCCTATTTaGATCAGAAAGAGCTTCCAAGACAGCCAGAAACTGGGATGCAGT +
Preference number: 5 (lower is better)
Translates to: HFICNNGSSLQYSPI*IRKSFQDSQKLGCS
Trigger: ACTGCATCCCAGTTTCTGGCTGTCTTGGAAGCTCTTTCTGATTCAAATAGGCGAATACTGCAAACTGGACCCATTGTTACAGATGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS GCA 90 bp TGTGGCAGAGCCACTTGCATGATGAGCCTTAAGGAGGACAAGATATaGAGACACTGGACCACAGATTCTTTATTCTTCAGGTTTTCATCA +
Preference number: 5 (lower is better)
Translates to: CGRATCMMSLKEDKI*RHWTTDSLFFRFSS
Trigger: TGATGAAAACCTGAAGAATAAAGAATCTGTGGTCCAGTGTCTGCATATCTTGTCCTCCTTAAGGCTCATCATGCAAGTGGCTCTGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS GCA 90 bp CTTCGCGATTCTTCCTGGGATTTTGAGGAACTCATTAATTCCAGTTaGCTTAACTCATCAATTTTAGCCAAAGCACGCCGAGCAAATGCC +
Preference number: 5 (lower is better)
Translates to: LRDSSWDFEELINSS*LNSSILAKARRANA
Trigger: GGCATTTGCTCGGCGTGCTTTGGCTAAAATTGATGAGTTAAGGCAACTGGAATTAATGAGTTCCTCAAAATCCCAGGAAGAATCGCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS CCA 90 bp GTTATCTTCTCTCCATATTCAGCCTCATACCTTGCACAAGGTTGTTaGGTAATATCTGGGCCCTTGAACTTCTGTATTCTCAGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: VIFSPYSASYLAQGC*VISGPLNFCILSRS
Trigger: GCTTCTGCTGAGAATACAGAAGTTCAAGGGCCCAGATATTACCCAACAACCTTGTGCAAGGTATGAGGCTGAATATGGAGAGAAGATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAACGCAGACAAGCGCTTaGGCTCGGCTGTATTCTGAA +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVTQTSA*ARLYSE
Trigger: TTCAGAATACAGCCGAGCCAAAGCGCTTGTCTGCGT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGGATCTGTTATGGTATTaGGATTTTTCCAGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: TDLELTEKIGVKLPYWELDLLWY*DFSSVS
Trigger: AGAGACACTGGAAAAATCCAAATACCATAACAGATC...CAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACAACTTTAAGACTTCTTaGATTGCTGGCTTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: LELTEKIGVKLPYWELKHNFKTS*IAGLEN
Trigger: GTTCTCCAAGCCAGCAATCAAAGAAGTCTTAAAGTT...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAGCAAAACTAGGCTTCTaGCCAGGGTTAGCCGTGATT +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKAKLGF*PGLAVI
Trigger: AATCACGGCTAACCCTGGCAAGAAGCCTAGTTTTGC...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTCACTGCCATCTTCATaGTGGCCTCTCGAAAATATC +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYSLPSS*WPLENI
Trigger: GATATTTTCGAGAGGCCACAATGAAGATGGCAGTGA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGGAGCTCCAGGGAATTaGTTAGTCCCTTCTCTTAAA +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWGAPGN*LVPSLK
Trigger: TTTAAGAGAAGGGACTAACAAATTCCCTGGAGCTCC...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACGAATCATTTAGGAAGTaGCTAAGTTCCAATGCCACT +
Preference number: 5 (lower is better)
Translates to: LELTEKIGVKLPYWELKHESFRK*LSSNAT
Trigger: AGTGGCATTGGAACTTAGCAACTTCCTAAATGATTC...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGAAGAAGTCCATAACATaGAGTCACAGCTTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWKKSIT*SHSLKG
Trigger: GCCCTTCAAGCTGTGACTCAATGTTATGGACTTCTT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTCGAGCAGACAATACTaGGTAGTCCTTGCAAAACCA +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYSSRQY*VVLAKP
Trigger: TGGTTTTGCAAGGACTACCAAGTATTGTCTGCTCGA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAATAGGTTCTGTCTCCTaGGGAGGTCTATCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVIGSVS*GGLSRG
Trigger: TCCCCTGGATAGACCTCCCAAGGAGACAGAACCTAT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp TCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCCAGTCTATCATTGTaGGACACTTGGCTTGGTTCC +
Preference number: 5 (lower is better)
Translates to: SFGYIPSNGMAGSNGISSSSLSL*DTWLGS
Trigger: GGAACCAAGCCAAGTGTCCAACAATGATAGACTGGA...ACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS GCA 90 bp ACAAAGGCTATCTCCAACCTTCAGAAGCTTTTCGTTGTAATAGTCTaGTGGCAGCCTGGGGGCGTATTTAGTCCAGATATTAAACAAAGA +
Preference number: 5 (lower is better)
Translates to: TKAISNLQKLFVVIV*WQPGGVFSPDIKQR
Trigger: TCTTTGTTTAATATCTGGACTAAATACGCCCCCAGGCTGCCAGCAGACTATTACAACGAAAAGCTTCTGAAGGTTGGAGATAGCCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS CCA 90 bp AAGGCTATCTCCAACCTTCAGAAGCTTTTCGTTGTAATAGTCTGCTaGCAGCCTGGGGGCGTATTTAGTCCAGATATTAAACAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: KAISNLQKLFVVIVC*QPGGVFSPDIKQRS
Trigger: ACTTCTTTGTTTAATATCTGGACTAAATACGCCCCCAGGCTGCCAGCAGACTATTACAACGAAAAGCTTCTGAAGGTTGGAGATAGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCCATTACACACAAATTaGCTCCTCGGTCCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWPLHTN*LLGPFL
Trigger: AAGAAAAGGACCGAGGAGCAAATTTGTGTGTAATGG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACAGACTAGAACCACCGTaGTCATTTTTAATATTCCCA +
Preference number: 5 (lower is better)
Translates to: LELTEKIGVKLPYWELKHRLEPP*SFLIFP
Trigger: TGGGAATATTAAAAATGACAACGGTGGTTCTAGTCT...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAATACCTTGCACAAGGTaGTTGGGTAATATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKIPCTR*LGNIWA
Trigger: GGCCCAGATATTACCCAACAACCTTGTGCAAGGTAT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCTGTGCAGTTGCTTGTaGCTTCAATGGTTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWLCSCL*LQWLKN
Trigger: ATTCTTCAACCATTGAAGCAACAAGCAACTGCACAG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTGTGCAGTTGCTTGTaGCTTCAATGGTTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYLCSCL*LQWLKN
Trigger: ATTCTTCAACCATTGAAGCAACAAGCAACTGCACAG...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGAATCTGTGCAGTTGCTaGTTGCTTCAATGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWNLCSC*LLQWLK
Trigger: CTTCAACCATTGAAGCAACAAGCAACTGCACAGATT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATAATCTGTGCAGTTGCTaGTTGCTTCAATGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYNLCSC*LLQWLK
Trigger: CTTCAACCATTGAAGCAACAAGCAACTGCACAGATT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTTCTGCTGTGTCGGATaGATCTGTTATGGTATTTGG +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYFCCVG*ICYGIW
Trigger: CCAAATACCATAACAGATCAATCCGACACAGCAGAA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACTCCAGAAACAAAATATaGATACAATGCAAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LELTEKIGVKLPYWELKHSRNKI*IQCKER
Trigger: CCTCTCCTTGCATTGTATCAATATTTTGTTTCTGGA...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAACTGGGACACAATTTATaGTCGCAGCCACACTTAGGA +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKLGHNL*SQPHLG
Trigger: TCCTAAGTGTGGCTGCGACAATAAATTGTGTCCCAG...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATGAAGAGGGAGATTCCTaGAATTTCTCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYEEGDS*NFSALV
Trigger: AACCAAAGCTGAGAAATTCAAGGAATCTCCCTCTTC...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTCAAAGACTCCTCTTTaGAAGATCATCACTGCCATC +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYSKTPL*KIITAI
Trigger: GATGGCAGTGATGATCTTCAAAAGAGGAGTCTTTGA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGCAGTATTCGCCTATTaGAATCAGAAAGAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWAVFAY*NQKELP
Trigger: TGGAAGCTCTTTCTGATTCAAATAGGCGAATACTGC...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACCATCAAACAGAGACTaGCATCCTGGTGTGATGTCC +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVPSNRD*HPGVMS
Trigger: GGACATCACACCAGGATGCAAGTCTCTGTTTGATGG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp TCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTATCCATCAGGTATCGTaGTGCTGCTTTCCTAACACT +
Preference number: 5 (lower is better)
Translates to: SFGYIPSNGMAGSNGISSIHQVS*CCFPNT
Trigger: AGTGTTAGGAAAGCAGCACAACGATACCTGATGGAT...ACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CAA 90 bp CTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGGAGCTGAAACACCTACAGTCAATTTTCTaGTTGGTAATACTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: LELTEKIGVKLPYWELKHLQSIF*LVILFL
Trigger: CAGGAACAGTATTACCAACAAGAAAATTGACTGTAG...GTGTTTCAGCTCCCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATGCAGATGCTAGCAGTTaGCTCAGATTATTAATCCTC +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYADASS*LRLLIL
Trigger: GAGGATTAATAATCTGAGCAAACTGCTAGCATCTGC...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATTCCAGATACTGGTGTaGCAGATGCTAGCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKFQILV*QMLAVC
Trigger: GCAAACTGCTAGCATCTGCAACACCAGTATCTGGAA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS TCA 90 bp GCAACAAATGCAGTCACCAATGCTAAGCGGCACCTCAACCACAGATaGATGTTGAAATATTCTCGGGCATTTAGGGAAATAGGATCTAAA +
Preference number: 5 (lower is better)
Translates to: ATNAVTNAKRHLNHR*MLKYSRAFREIGSK
Trigger: TTTAGATCCTATTTCCCTAAATGCCCGAGAATATTTCAACATTCATCTGTGGTTGAGGTGCCGCTTAGCATTGGTGACTGCATTTGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS TCA 90 bp GCACTTCTTTCTGGCGCAAAATCAACTCAGAGTTGTAAAGGGATGTaGGAAGTGTATCATCTGGCAAAGAAATTCCAGATACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: ALLSGAKSTQSCKGM*EVYHLAKKFQILVL
Trigger: CAACACCAGTATCTGGAATTTCTTTGCCAGATGATACACTTCTCACATCCCTTTACAACTCTGAGTTGATTTTGCGCCAGAAAGAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS GCA 90 bp GAAATTTCGGCAAGTTATCTTCTCTCCATATTCAGCCTCATACCTTaGACAAGGTTGTTGGGTAATATCTGGGCCCTTGAACTTCTGTAT +
Preference number: 5 (lower is better)
Translates to: EISASYLLSIFSLIP*TRLLGNIWALELLY
Trigger: ATACAGAAGTTCAAGGGCCCAGATATTACCCAACAACCTTGTGCAAGGTATGAGGCTGAATATGGAGAGAAGATAACTTGCCGAAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS GCA 90 bp AATGACTTAATAAATTGTGCTATCTTTGCTGATATGACTGCTCCTTaGAAACACCCCCAGATGCCAACTCTTGACAGAAACTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: NDLINCAIFADMTAP*KHPQMPTLDRNSSL
Trigger: CAGTGAGGAGTTTCTGTCAAGAGTTGGCATCTGGGGGTGTTTGCAAGGAGCAGTCATATCAGCAAAGATAGCACAATTTATTAAGTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS GCA 90 bp AAGCTCGCAGTATGTTTCTTCGAGCAGACAATACTTGGTAGTCCTTaGAAAACCACTATACACTTTATCAGGATCTGTACAACAGGTACC +
Preference number: 5 (lower is better)
Translates to: KLAVCFFEQTILGSP*KTTIHFIRICTTGT
Trigger: GGTACCTGTTGTACAGATCCTGATAAAGTGTATAGTGGTTTTGCAAGGACTACCAAGTATTGTCTGCTCGAAGAAACATACTGCGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000554108.6
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATCTTTGATTGCTGGCTaGGAGAACATCTTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKSLIAG*ENILCL
Trigger: CAGACACAAGATGTTCTCCAAGCCAGCAATCAAAGA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATAACTTTAAGACTTCTTaGATTGCTGGCTTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYNFKTS*IAGLEN
Trigger: GTTCTCCAAGCCAGCAATCAAAGAAGTCTTAAAGTT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATCCATACACACTTCATaGATGAGGCTCAGGCAATCT +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKSIHTS*MRLRQS
Trigger: AGATTGCCTGAGCCTCATCAATGAAGTGTGTATGGA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGTGCAGCAGCTCTTATaGCAATCCAGGCTAATGAAC +
Preference number: 5 (lower is better)
Translates to: AGQLINSEISKQYLEYLYVQQLL*QSRLMN
Trigger: GTTCATTAGCCTGGATTGCAATAAGAGCTGCTGCAC...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTTGTTTCTCTTCACGTaGATTAGTGGTTCCATTGCA +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYLFLFT*ISGSIA
Trigger: TGCAATGGAACCACTAATCAACGTGAAGAGAAACAA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATAATCAGTCTGGCAATTaGTTGAGATGGGAAAATCTC +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYNQSGN*LRWENL
Trigger: GAGATTTTCCCATCTCAACAAATTGCCAGACTGATT...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATGAATCATTTAGGAAGTaGCTAAGTTCCAATGCCACT +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYESFRK*LSSNAT
Trigger: AGTGGCATTGGAACTTAGCAACTTCCTAAATGATTC...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAACATTGAGTCACAGCTaGAAGGGCATAGCTGGAATC +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVTLSHS*KGIAGI
Trigger: GATTCCAGCTATGCCCTTCAAGCTGTGACTCAATGT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGACAAGCTATCATGTGTaGTATACTTTCAAAGCTCGC +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWTSYHV*YTFKAR
Trigger: GCGAGCTTTGAAAGTATACAACACATGATAGCTTGT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTTCCAGATACTGGTGTaGCAGATGCTAGCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: AGQLINSEISKQYLEYLYFQILV*QMLAVC
Trigger: GCAAACTGCTAGCATCTGCAACACCAGTATCTGGAA...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGCCTCAGATAGTGGTGTaGGCTCTTTATCATTCAAAA +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWPQIVV*ALYHSK
Trigger: TTTTGAATGATAAAGAGCCAACACCACTATCTGAGG...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGATATACAGACCTGGAACTCACAGAGAAGATAGGAGTTAAACTGCCCTACTGGAAAAGTCTCTCAAGATaGAATATAGACGGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RYTDLELTEKIGVKLPYWKSLSR*NIDGSE
Trigger: CTCACTGCCGTCTATATTCAATCTTGAGAGACTTTT...CCAGTAGGGCAGTTTAACTCCTATCTTCTCTGTGAGTTCCAGGTCTGTATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GATGGCATTGAATCTATAAATTACCTAGGCAGTATGGCCATTTTCACGATATTGTCTTTTGGCTTAGGATaGACTTGGCGATGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: DGIESINYLGSMAIFTILSFGLG*TWRCRL
Trigger: GAGCCTGCATCGCCAAGTCAATCCTAAGCCAAAAGA...CAATATCGTGAAAATGGCCATACTGCCTAGGTAATTTATAGATTCAATGCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS TCA 90 bp TCTATCCAGGGGAGGAATGTACCATTGAAAGCAAAGTTCTTTGTTTaGAGCTTGCGTTACCATTTCTATTGGCGTTATGTCCACACAAGA +
Preference number: 5 (lower is better)
Translates to: SIQGRNVPLKAKFFV*SLRYHFYWRYVHTR
Trigger: TCTTGTGTGGACATAACGCCAATAGAAATGGTAACGCAAGCTTCAAACAAAGAACTTTGCTTTCAATGGTACATTCCTCCCCTGGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAGTAATATCTGGGCCCTaGAACTTCTGTATTCTCAGC +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVVISGP*NFCILS
Trigger: GCTGAGAATACAGAAGTTCAAGGGCCCAGATATTAC...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAAGCAAATCTGTGCAGTaGCTTGTTGCTTCAATGGTT +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKSKSVQ*LVASMV
Trigger: AACCATTGAAGCAACAAGCAACTGCACAGATTTGCT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATATGTCCCCTGCGCTTTTaGCCTCCATACACACTTCAT +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYICPLRF*PPYTLH
Trigger: ATGAAGTGTGTATGGAGGCAAAAAGCGCAGGGGACA...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp ACCTATGAAGCTGCAGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATTTGAATTTCTCAGCTTaGGTTAAGTCATCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: TYEAAAGQLINSEISKQYLNFSA*VKSSSK
Trigger: TTTGCTGGATGACTTAACCAAAGCTGAGAAATTCAA...ATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCTGCAGCTTCATAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATGTTCCTCCACTGCTGTaGTTCTACAGAGCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYVPPLL*FYRASV
Trigger: CACTGAAGCTCTGTAGAACAACAGCAGTGGAGGAAC...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTGGAGTCTGCAAAACTaGCAATTTGTCCAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: AGQLINSEISKQYLEYLYWSLQN*QFVQKH
Trigger: GTGCTTCTGGACAAATTGCAAGTTTTGCAGACTCCA...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAAAGAAGTCCATAACATaGAGTCACAGCTTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVKKSIT*SHSLKG
Trigger: GCCCTTCAAGCTGTGACTCAATGTTATGGACTTCTT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATATTGCTTTGTCAGTTaGAGTAGGTGTGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKYCFVS*SRCVSN
Trigger: GTTGGAGACACACCTACTCAAACTGACAAAGCAATA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCTTTCACGGCACCTTaGACCGACCAATTCAAAACT +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVSFTAP*TDQFKT
Trigger: AGTTTTGAATTGGTCGGTCAAAGGTGCCGTGAAAGA...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTCTTTCACGGCACCTTaGACCGACCAATTCAAAACT +
Preference number: 5 (lower is better)
Translates to: AGQLINSEISKQYLEYLYSFTAP*TDQFKT
Trigger: AGTTTTGAATTGGTCGGTCAAAGGTGCCGTGAAAGA...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAATCCATCAGGTATCGTaGTGCTGCTTTCCTAACACT +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVIHQVS*CCFPNT
Trigger: AGTGTTAGGAAAGCAGCACAACGATACCTGATGGAT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATCCATCAGGTATCGTaGTGCTGCTTTCCTAACACT +
Preference number: 5 (lower is better)
Translates to: AGQLINSEISKQYLEYLYIHQVS*CCFPNT
Trigger: AGTGTTAGGAAAGCAGCACAACGATACCTGATGGAT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACTATCGCGATACAACTaGGCAGATGATTCACGTAAG +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVLSRYN*ADDSRK
Trigger: CTTACGTGAATCATCTGCCAAGTTGTATCGCGATAG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAATTGACACTATCCAGTaGAAAAGGCTTCCTCCTGAT +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKIDTIQ*KRLPPD
Trigger: ATCAGGAGGAAGCCTTTTCAACTGGATAGTGTCAAT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp TATACGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACACTTGGCTTGGAAAGTCATTGGTAGCTaGATGGGGATGGCATTGAAT +
Preference number: 5 (lower is better)
Translates to: YTCHIFLIQSIIVGHLAWKVIGS*MGMALN
Trigger: ATTCAATGCCATCCCCATCAAGCTACCAATGACTTT...CCAAGCCAAGTGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CAA 90 bp ATTCTTCCTATCCCTAAGCATGGAATGTTCTTCCACTGGTTTGTATCCTCTTTTCGTCCTTGCGATAGTTaGCTGAGAATGATAGTTTCC +
Preference number: 5 (lower is better)
Translates to: ILPIPKHGMFFHWFVSSFRPCDS*LRMIVS
Trigger: GGAAACTATCATTCTCAGCAAACTATCGCAAGGACG...AAAAGAGGATACAAACCAGTGGAAGAACATTCCATGCTTAGGGATAGGAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGATGAGCAAGAACCATaGCTCTCCTGCAGTATAAAA +
Preference number: 5 (lower is better)
Translates to: AGQLINSEISKQYLEYLYDEQEP*LSCSIK
Trigger: TTTTATACTGCAGGAGAGCAATGGTTCTTGCTCATC...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATAGCAAATCTGTGCAGTaGCTTGTTGCTTCAATGGTT +
Preference number: 5 (lower is better)
Translates to: AGQLINSEISKQYLEYLYSKSVQ*LVASMV
Trigger: AACCATTGAAGCAACAAGCAACTGCACAGATTTGCT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCTGAGTGATTTCATATaGAGCATAGCAACGTTCAGC +
Preference number: 5 (lower is better)
Translates to: AGQLINSEISKQYLEYLYLSDFI*SIATFS
Trigger: GCTGAACGTTGCTATGCTCAATATGAAATCACTCAG...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATGCCAAGAATTACAGCTaGCGTCAAGAATTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYAKNYS*RQEFSL
Trigger: CAGGCTGAATTCTTGACGCAAGCTGTAATTCTTGGC...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGAAGAGGGAGATTCCTaGAATTTCTCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: AGQLINSEISKQYLEYLYEEGDS*NFSALV
Trigger: AACCAAAGCTGAGAAATTCAAGGAATCTCCCTCTTC...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAAATTCTTGTAATATACTaGCTTGGCCACTGTATGTCC +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKILVIY*LGHCMS
Trigger: GGACATACAGTGGCCAAGCAAGTATATTACAAGAAT...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AATTGTGAATGGGAGTTCACTCATGATTTGGCTCTTTGTTTGTCTGTTATTGGTTCTTTCACGGCACCTTaGACCGACCAATTCAAAACT +
Preference number: 5 (lower is better)
Translates to: NCEWEFTHDLALCLSVIGSFTAP*TDQFKT
Trigger: AGTTTTGAATTGGTCGGTCAAAGGTGCCGTGAAAGA...ACCAATAACAGACAAACAAAGAGCCAAATCATGAGTGAACTCCCATTCACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATAGTCTGGAAGAGGACTaGGTAGTTGTCAAGCAAATA +
Preference number: 5 (lower is better)
Translates to: AGQLINSEISKQYLEYLYSLEED*VVVKQI
Trigger: TATTTGCTTGACAACTACCAAGTCCTCTTCCAGACT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AATCCAGTCTATCATTGTTGGACACTTGGCTTGGTTCCAAGTCTTTGCTATTGTGAGTTCACTCATGATTaGGCTCTTTGTTTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: NPVYHCWTLGLVPSLCYCEFTHD*ALCLSV
Trigger: AACAGACAAACAAAGAGCCAAATCATGAGTGAACTC...ACAATAGCAAAGACTTGGAACCAAGCCAAGTGTCCAACAATGATAGACTGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CAA 90 bp CTGGTTTGTATCCTCTTTTATTTCATTGAGCAGTGGTTTGTAGTTCTCCTTGAACCTCTCCAGCACCTCTaGTTTCCTGACTTTTTAATG +
Preference number: 5 (lower is better)
Translates to: LVCILFYFIEQWFVVLLEPLQHL*FPDFLM
Trigger: CATTAAAAAGTCAGGAAACAAGAGGTGCTGGAGAGG...TTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CAA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAAGGTCAGGGGGTATaGACATATGCATCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYKGQGV*TYASPL
Trigger: CAGAGGAGATGCATATGTCAATACCCCCTGACCTTT...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATCTTTGATTGCTGGCTaGGAGAACATCAATAGTTTG +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKSLIAG*ENINSL
Trigger: CAAACTATTGATGTTCTCCAAGCCAGCAATCAAAGA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637336.1
CDS TCA 90 bp TTCCTGGGCTTCCTAAAGATTCCAATATTTCACTTAACCGTAATGTaGCTTCTGCCACTACCACAATGTCAATGTCTTCCATTTTATAGC +
Preference number: 5 (lower is better)
Translates to: FLGFLKIPIFHLTVM*LLPLPQCQCLPFYS
Trigger: GCTATAAAATGGAAGACATTGACATTGTGGTAGTGGCAGAAGTCACATTACGGTTAAGTGAAATATTGGAATCTTTAGGAAGCCCAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000554108.6
CDS TCA 90 bp TTGTTCATCCTGAAGTGGCGAAGCAACAAAATAATCCCAAACTGGTaGGAAAACTTTCTTAGCCAATTCATAGTTACCAACTTGATAGGC +
Preference number: 5 (lower is better)
Translates to: LFILKWRSNKIIPNW*ENFLSQFIVTNLIG
Trigger: GCCTATCAAGTTGGTAACTATGAATTGGCTAAGAAAGTTTTCTCACCAGTTTGGGATTATTTTGTTGCTTCGCCACTTCAGGATGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000554108.6
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGTAATATCTGGGCCCTaGAACTTCTGTATTCTCAGC +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYIVISGP*NFCILS
Trigger: GCTGAGAATACAGAAGTTCAAGGGCCCAGATATTAC...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GAGAGAGTGGGGAAGCCAAAGCAACTTGATAAAGAAATAGATAAGCTGGACAAATCCAGAAACAAAATATaGATACAATGCAAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ERVGKPKQLDKEIDKLDKSRNKI*IQCKER
Trigger: CCTCTCCTTGCATTGTATCAATATTTTGTTTCTGGA...TTTGTCCAGCTTATCTATTTCTTTATCAAGTTGCTTTGGCTTCCCCACTCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAATATCTCTTCCAAGTTaGGTAGGTTTGGTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVISLPS*VGLVCS
Trigger: AGAGCAAACCAAACCTACCAAACTTGGAAGAGATAT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATTGGTAGAAATATCTTaGCTAACAGTTGGAGTCTGC +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVLVEIS*LTVGVC
Trigger: GCAGACTCCAACTGTTAGCAAAGATATTTCTACCAA...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAAAAGGTACAAGAGGATaGAAGAAGTCTCTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVKGTRG*KKSLPK
Trigger: TTTTGGCAGAGACTTCTTCAATCCTCTTGTACCTTT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp AATTGTGAATGGGAGTTCACTCATGATTTGGCTCTTTGTTTGTCTGTTATTGGTTATTGCTTTGTCAGTTaGAGTAGGTGTGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: NCEWEFTHDLALCLSVIGYCFVS*SRCVSN
Trigger: GTTGGAGACACACCTACTCAAACTGACAAAGCAATA...ACCAATAACAGACAAACAAAGAGCCAAATCATGAGTGAACTCCCATTCACAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGCGTTACCATTTCTATaGGCGTTATGTCCACACAAG +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYIALPFL*ALCPHK
Trigger: CTTGTGTGGACATAACGCCAATAGAAATGGTAACGC...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACCTCAGATAGTGGTGTaGGCTCTTTATCATTCAAAA +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVPQIVV*ALYHSK
Trigger: TTTTGAATGATAAAGAGCCAACACCACTATCTGAGG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGATTTTTGATGGTAGTTTCTTTTaGCTGTGCAGAAGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: VLIVQFPPMSENMRCLIFDGSFF*LCRSSL
Trigger: TAAAGAGCTTCTGCACAGCAAAAAGAAACTACCATC...AAAAATCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATGTGAATATGGAAGTTaGCTTTTCTCCACGGAACTA +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVCEYGS*LFSTEL
Trigger: TAGTTCCGTGGAGAAAAGCAAACTTCCATATTCACA...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637336.1
CDS GCA 90 bp GTGCAGTTGCTTGTTGCTTCAATGGTTGAAGAATTAATCTTAAGCTaGTTCCCAATGAAATTTCGGCAAGTTATCTTCTCTCCATATTCA +
Preference number: 5 (lower is better)
Translates to: VQLLVASMVEELILS*FPMKFRQVIFSPYS
Trigger: TGAATATGGAGAGAAGATAACTTGCCGAAATTTCATTGGGAAGCAGCTTAAGATTAATTCTTCAACCATTGAAGCAACAAGCAACTGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CCA 90 bp AGAAATAATGAAAGCAACTTTCTGCTGTGTCGGATTGATCTGTTATaGTATTTGGATTTTTCCAGTGTCTCTCTAAAACACCTCAAGGTG +
Preference number: 5 (lower is better)
Translates to: RNNESNFLLCRIDLL*YLDFSSVSLKHLKV
Trigger: CACCTTGAGGTGTTTTAGAGAGACACTGGAAAAATCCAAATACCATAACAGATCAATCCGACACAGCAGAAAGTTGCTTTCATTATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAGGACTTCTATCTaGAGGATTCTTGCTTCTAGA +
Preference number: 5 (lower is better)
Translates to: AGQLINSEISKQYLEYLYIRTSI*RILASR
Trigger: TCTAGAAGCAAGAATCCTCAAGATAGAAGTCCTTAT...ATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTAAGGTTTGGTTTGCTCTaGTTGGTAATTACTGTCTTA +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVRFGLL*LVITVL
Trigger: TAAGACAGTAATTACCAACAAGAGCAAACCAAACCT...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACCAGAAGAGATGTTTTaGGAAAATCAAGCATTCCAT +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVPEEMF*ENQAFH
Trigger: ATGGAATGCTTGATTTTCCAAAAACATCTCTTCTGG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATCGCTTCTCCTGAATTaGGGAGATGATTATTGTTTA +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVSLLLN*GDDYCL
Trigger: TAAACAATAATCATCTCCCAAATTCAGGAGAAGCGA...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATTTCATAGTTACCAACTaGATAGGCAACCTGTGTCAG +
Preference number: 5 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYFIVTN*IGNLCQ
Trigger: CTGACACAGGTTGCCTATCAAGTTGGTAACTATGAA...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524981.9
CDS-3UTR CAA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATTATTGCTTTGTCAGTTaGAGTAGGTGTGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYYCFVS*SRCVSN
Trigger: GTTGGAGACACACCTACTCAAACTGACAAAGCAATA...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGCAGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTACTACAGTCAATTTTCTaGTTGGTAATACTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: SRPVDQQRNLKAISRVFVLQSIF*LVILFL
Trigger: CAGGAACAGTATTACCAACAAGAAAATTGACTGTAG...TACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAGTCTGGAAGAGGACTaGGTAGTTGTCAAGCAAATA +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYISLEED*VVVKQI
Trigger: TATTTGCTTGACAACTACCAAGTCCTCTTCCAGACT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGCAGATGCTAGCAGTTaGCTCAGATTATTAATCCTC +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYIADASS*LRLLIL
Trigger: GAGGATTAATAATCTGAGCAAACTGCTAGCATCTGC...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AATTGTGAATGGGAGTTCACTCATGATTTGGCTCTTTGTTTGTCTGTTATTGGTTCCCATTTGTCAATTTaGGCTTTTCTTGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: NCEWEFTHDLALCLSVIGSHLSI*AFLAIA
Trigger: AGCAATGGCAAGAAAAGCCAAAATTGACAAATGGGA...ACCAATAACAGACAAACAAAGAGCCAAATCATGAGTGAACTCCCATTCACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CAA 90 bp CTGGTTTGTATCCTCTTTTATTTCATTGAGCAGTGGTTTGTAGTTCTCCTTGAACATTGTGGTTTTGATTaGCATTTTTCTGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: LVCILFYFIEQWFVVLLEHCGFD*HFSDGQ
Trigger: CTGGCCATCAGAAAAATGCAAATCAAAACCACAATG...TTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS-3UTR CAA 90 bp ATAAATTACCTAGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTATCCCTGCACAATGTGCAGGTTaGTTACATACGTATACATGT +
Preference number: 5 (lower is better)
Translates to: INYLGSMAIFTILILPIPAQCAG*LHTYTC
Trigger: ACATGTATACGTATGTAACAAACCTGCACATTGTGC...AGGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCTAGGTAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550977.2
CDS GCA 90 bp TCGTGGATCCATTTCAAATCAACCACATTTACATCATCCAAAGGATaGTCAAAGGTAAGACTAGAACCACCGTTGTCATTTTTAATATTC +
Preference number: 5 (lower is better)
Translates to: SWIHFKSTTFTSSKG*SKVRLEPPLSFLIF
Trigger: GAATATTAAAAATGACAACGGTGGTTCTAGTCTTACCTTTGAGCATCCTTTGGATGATGTAAATGTGGTTGATTTGAAATGGATCCACGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATTATGTCATCAAGAGCTaGACACCAACACTTAAAAGC +
Preference number: 5 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYYVIKS*TPTLKS
Trigger: GCTTTTAAGTGTTGGTGTCAAGCTCTTGATGACATA...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATATTCTTGTAATATACTaGCTTGGCCACTGTATGTCC +
Preference number: 5 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYILVIY*LGHCMS
Trigger: GGACATACAGTGGCCAAGCAAGTATATTACAAGAAT...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAATCAGTCTGGCAATTaGTTGAGATGGGAAAATCTC +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYINQSGN*LRWENL
Trigger: GAGATTTTCCCATCTCAACAAATTGCCAGACTGATT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAGGGAGGAATGTACCATaGAAAGCAAAGTTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYIGRNVP*KAKFFV
Trigger: AACAAAGAACTTTGCTTTCAATGGTACATTCCTCCC...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAAAAGTCTCTCAAGATaGAATATAGACGGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYIKSLSR*NIDGSE
Trigger: CTCACTGCCGTCTATATTCAATCTTGAGAGACTTTT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATATGTGCAAGCAAGACATaGAATCATGACTACTTCTTC +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYICASKT*NHDYFF
Trigger: GAAGAAGTAGTCATGATTCAATGTCTTGCTTGCACA...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS TCA 90 bp TATAGTTTTCCAAAGGAAAGATCAAACCTTTGTTTCTCTTCACGTTaGTTAGTGGTTCCATTGCAATCAGAAGAGTTAAATCCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: YSFPKERSNLCFSSR*LVVPLQSEELNPSL
Trigger: CAGAGAAGGATTTAACTCTTCTGATTGCAATGGAACCACTAATCAACGTGAAGAGAAACAAAGGTTTGATCTTTCCTTTGGAAAACTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS TCA 90 bp CTATTCGATGCTGAGCTTGAATTAGTTCAAGATGCAAATCCATCATaGAACTATTTGAGGCAAGTGGTTTGTAAGTATCTCCATCTATAT +
Preference number: 5 (lower is better)
Translates to: LFDAELELVQDANPS*NYLRQVVCKYLHLY
Trigger: ATATAGATGGAGATACTTACAAACCACTTGCCTCAAATAGTTTCATGATGGATTTGCATCTTGAACTAATTCAAGCTCAGCATCGAATAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000524981.9
ENST00000554108.6
ENST00000554821.1
ENST00000556591.1
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAGACTAGAACCACCGTaGTCATTTTTAATATTCCCA +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYIRLEPP*SFLIFP
Trigger: TGGGAATATTAAAAATGACAACGGTGGTTCTAGTCT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp AGGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATGATCTGTTATGGTATTaGGATTTTTCCAGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: RPVDQQRNLKAISRVFVYDLLWY*DFSSVS
Trigger: AGAGACACTGGAAAAATCCAAATACCATAACAGATC...ATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAATAAGGACTTCTATCTaGAGGATTCTTGCTTCTAGA +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYIIRTSI*RILASR
Trigger: TCTAGAAGCAAGAATCCTCAAGATAGAAGTCCTTAT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS-3UTR CAA 90 bp GGCCAGTTGATCAACAGCGAAATCTCAAAGCAATATCTAGAGTATTTGTATATAAGGTTTGGTTTGCTCTaGTTGGTAATTACTGTCTTA +
Preference number: 5 (lower is better)
Translates to: GQLINSEISKQYLEYLYIRFGLL*LVITVL
Trigger: TAAGACAGTAATTACCAACAAGAGCAAACCAAACCT...TATATACAAATACTCTAGATATTGCTTTGAGATTTCGCTGTTGATCAACTGGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS GCA 72 bp GTAGAGTCGTCTGACGGAGAGCTCGAGGGGGAGCCCTaGGCCGCCATATTGACGCGCCCCGGCCCGCCTGGA +
Preference number: 6 (lower is better)
Translates to: VESSDGELEGEP*AAILTRPGPPG
Trigger: TCCAGGCGGGCCGGGGCGCGTCAATATGGCGGCGCAGGGCTCCCCCTCGAGCTCTCCGTCAGACGACTCTAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS CCA 72 bp CTGAAGCAGCGAGCTCCGGGAGCTCCCCTTCGACTCTaGGGGCGACCTCGAAGTCGCGGTGGAGGTCGGCGG +
Preference number: 6 (lower is better)
Translates to: LKQRAPGAPLRL*GRPRSRGGGRR
Trigger: CCGCCGACCTCCACCGCGACTTCGAGGTCGCCCCCAGAGTCGAAGGGGAGCTCCCGGAGCTCGCTGCTTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS CAA 72 bp GACGGAGAGCTCGAGGGGGAGCCCTGCGCCGCCATATaGACGCGCCCCGGCCCGCCTGGAGTATGTGTACAC +
Preference number: 6 (lower is better)
Translates to: DGELEGEPCAAI*TRPGPPGVCVH
Trigger: GTGTACACATACTCCAGGCGGGCCGGGGCGCGTCAATATGGCGGCGCAGGGCTCCCCCTCGAGCTCTCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554621.1
CDS TCA 72 bp CAGTTCTGGCAGAGACCCCGAGGTGGTAGAGTCGTCTaGCGGAGAGCTCGAGGGGGAGCCCTGCGCCGCCAT +
Preference number: 6 (lower is better)
Translates to: QFWQRPRGGRVV*RRARGGALRRH
Trigger: ATGGCGGCGCAGGGCTCCCCCTCGAGCTCTCCGTCAGACGACTCTACCACCTCGGGGTCTCTGCCAGAACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS TCA 72 bp GCCTCCACCACAATCTCCAGCTCGCCAGCGGAGCACTaGGACAGGGTCTTCTGTTCCACCTCGGACAGAAGG +
Preference number: 6 (lower is better)
Translates to: ASTTISSSPAEH*DRVFCSTSDRR
Trigger: CCTTCTGTCCGAGGTGGAACAGAAGACCCTGTCTCAGTGCTCCGCTGGCGAGCTGGAGATTGTGGTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS TCA 72 bp TGTGTAGAGAGTAGCGCGCCATGTCAAGTACCTGAGTaGCAGGAGCGGGACCAAGGACTCCATACACATGCT +
Preference number: 6 (lower is better)
Translates to: CVESSAPCQVPE*QERDQGLHTHA
Trigger: AGCATGTGTATGGAGTCCTTGGTCCCGCTCCTGTCACTCAGGTACTTGACATGGCGCGCTACTCTCTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS GCA 72 bp GAATTCAGCCTGCAGTTCCGTGTCCCCTGCGCTTTTTaGCTCCATACACACTTCATTGATGAGGCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: EFSLQFRVPCAF*LHTHFIDEAQA
Trigger: TGCCTGAGCCTCATCAATGAAGTGTGTATGGAGGCAAAAAGCGCAGGGGACACGGAACTGCAGGCTGAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS GCA 72 bp AGGCCAAGAATTACAGCTTGCGTCAAGAATTCAGCCTaGAGTTCCGTGTCCCCTGCGCTTTTTGCCTCCATA +
Preference number: 6 (lower is better)
Translates to: RPRITACVKNSA*SSVSPALFASI
Trigger: TATGGAGGCAAAAAGCGCAGGGGACACGGAACTGCAGGCTGAATTCTTGACGCAAGCTGTAATTCTTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CCA 72 bp TCTGGGCCCTTGAACTTCTGTATTCTCAGCAGAAGCTaGCGCTGTGCATACACCAGAAGTGGTGTCACTTGT +
Preference number: 6 (lower is better)
Translates to: SGPLNFCILSRS*RCAYTRSGVTC
Trigger: ACAAGTGACACCACTTCTGGTGTATGCACAGCGCCAGCTTCTGCTGAGAATACAGAAGTTCAAGGGCCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CAA 72 bp GTGTCTGTCACGTCCACGGGCACGCAGACAAGCGCTTaGGCTCGGCTGTATTCTGAAGAGATAAGCATTTTT +
Preference number: 6 (lower is better)
Translates to: VSVTSTGTQTSA*ARLYSEEISIF
Trigger: AAAAATGCTTATCTCTTCAGAATACAGCCGAGCCAAAGCGCTTGTCTGCGTGCCCGTGGACGTGACAGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CAA 90 bp TCAGCCTCATACCTTGCACAAGGTTGTTGGGTAATATCTGGGCCCTaGAACTTCTGTATTCTCAGCAGAAGCTGGCGCTGTGCATACACC +
Preference number: 6 (lower is better)
Translates to: SASYLAQGCWVISGP*NFCILSRSWRCAYT
Trigger: GGTGTATGCACAGCGCCAGCTTCTGCTGAGAATACAGAAGTTCAAGGGCCCAGATATTACCCAACAACCTTGTGCAAGGTATGAGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS GCA 72 bp TTAAACAAAGAAGTGGCACAACGCCGGCGGAATTCGTaGTTCTCTTCCTCCGTGGTGGCTAAAGCCTTCTTT +
Preference number: 6 (lower is better)
Translates to: LNKEVAQRRRNS*FSSSVVAKAFF
Trigger: AAAGAAGGCTTTAGCCACCACGGAGGAAGAGAAGCACGAATTCCGCCGGCGTTGTGCCACTTCTTTGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS TCA 72 bp GTTGTTCTACAGAGCTTCAGTGCCACATCAAACAGATaGAGAGCAGGTAACCACTTCGAGGGGTCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: VVLQSFSATSNR*RAGNHFEGSFL
Trigger: AAGGAAGGACCCCTCGAAGTGGTTACCTGCTCTTCATCTGTTTGATGTGGCACTGAAGCTCTGTAGAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CAA 72 bp TACCTTGCACAAGGTTGTTGGGTAATATCTGGGCCCTaGAACTTCTGTATTCTCAGCAGAAGCTGGCGCTGT +
Preference number: 6 (lower is better)
Translates to: YLAQGCWVISGP*NFCILSRSWRC
Trigger: ACAGCGCCAGCTTCTGCTGAGAATACAGAAGTTCAAGGGCCCAGATATTACCCAACAACCTTGTGCAAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CAA 72 bp GTGTCCCCTGCGCTTTTTGCCTCCATACACACTTCATaGATGAGGCTCAGGCAATCTGTCATATCATCCTCT +
Preference number: 6 (lower is better)
Translates to: VSPALFASIHTS*MRLRQSVISSS
Trigger: AGAGGATGATATGACAGATTGCCTGAGCCTCATCAATGAAGTGTGTATGGAGGCAAAAAGCGCAGGGGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CAA 90 bp TGCAGTTCCGTGTCCCCTGCGCTTTTTGCCTCCATACACACTTCATaGATGAGGCTCAGGCAATCTGTCATATCATCCTCTTTCACAATT +
Preference number: 6 (lower is better)
Translates to: CSSVSPALFASIHTS*MRLRQSVISSSFTI
Trigger: AATTGTGAAAGAGGATGATATGACAGATTGCCTGAGCCTCATCAATGAAGTGTGTATGGAGGCAAAAAGCGCAGGGGACACGGAACTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS TCA 72 bp CAGTGCTATCAAACATCTCATCCAGTAGCCGCTCTGTaGCAGTTCGTGGCCATGATAAAGTTTGTACTTCCC +
Preference number: 6 (lower is better)
Translates to: QCYQTSHPVAAL*QFVAMIKFVLP
Trigger: GGGAAGTACAAACTTTATCATGGCCACGAACTGTCACAGAGCGGCTACTGGATGAGATGTTTGATAGCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS CCA 72 bp AAAGCCTTCTTTTTCCTCATAAAGCCTAACAACTCCTaGATCTCCTTCTCACAAGAGGCCAGGAGCGGGTTT +
Preference number: 6 (lower is better)
Translates to: KAFFFLIKPNNS*ISFSQEARSGF
Trigger: AAACCCGCTCCTGGCCTCTTGTGAGAAGGAGATCCAGGAGTTGTTAGGCTTTATGAGGAAAAAGAAGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS CAA 90 bp TCTGAAAAAGGATTTCAGCTTCCACCTCATGTTCCTCCACTGCTGTaGTTCTACAGAGCTTCAGTGCCACATCAAACAGATGAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: SEKGFQLPPHVPPLL*FYRASVPHQTDEEQ
Trigger: CTGCTCTTCATCTGTTTGATGTGGCACTGAAGCTCTGTAGAACAACAGCAGTGGAGGAACATGAGGTGGAAGCTGAAATCCTTTTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS GCA 72 bp ATCTCCAACCTTCAGAAGCTTTTCGTTGTAATAGTCTaGTGGCAGCCTGGGGGCGTATTTAGTCCAGATATT +
Preference number: 6 (lower is better)
Translates to: ISNLQKLFVVIV*WQPGGVFSPDI
Trigger: AATATCTGGACTAAATACGCCCCCAGGCTGCCAGCAGACTATTACAACGAAAAGCTTCTGAAGGTTGGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS GCA 72 bp ATAATCCAGCAAAGATGCTCTTGTGGCAGAGCCACTTaGATGATGAGCCTTAAGGAGGACAAGATATGCAGA +
Preference number: 6 (lower is better)
Translates to: IIQQRCSCGRAT*MMSLKEDKICR
Trigger: TCTGCATATCTTGTCCTCCTTAAGGCTCATCATGCAAGTGGCTCTGCCACAAGAGCATCTTTGCTGGATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS CAA 90 bp GCAAGTTATCTTCTCTCCATATTCAGCCTCATACCTTGCACAAGGTaGTTGGGTAATATCTGGGCCCTTGAACTTCTGTATTCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: ASYLLSIFSLIPCTR*LGNIWALELLYSQQ
Trigger: CTGCTGAGAATACAGAAGTTCAAGGGCCCAGATATTACCCAACAACCTTGTGCAAGGTATGAGGCTGAATATGGAGAGAAGATAACTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS TCA 72 bp GCAGTCACCAATGCTAAGCGGCACCTCAACCACAGATaGATGTTGAAATATTCTCGGGCATTTAGGGAAATA +
Preference number: 6 (lower is better)
Translates to: AVTNAKRHLNHR*MLKYSRAFREI
Trigger: TATTTCCCTAAATGCCCGAGAATATTTCAACATTCATCTGTGGTTGAGGTGCCGCTTAGCATTGGTGACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS GCA 72 bp GCAAGTTATCTTCTCTCCATATTCAGCCTCATACCTTaGACAAGGTTGTTGGGTAATATCTGGGCCCTTGAA +
Preference number: 6 (lower is better)
Translates to: ASYLLSIFSLIP*TRLLGNIWALE
Trigger: TTCAAGGGCCCAGATATTACCCAACAACCTTGTGCAAGGTATGAGGCTGAATATGGAGAGAAGATAACTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS GCA 72 bp TTTAAATGCTTTTCTTGTAGGCCAAGAATTACAGCTTaGGTCAAGAATTCAGCCTGCAGTTCCGTGTCCCCT +
Preference number: 6 (lower is better)
Translates to: FKCFSCRPRITA*VKNSACSSVSP
Trigger: AGGGGACACGGAACTGCAGGCTGAATTCTTGACGCAAGCTGTAATTCTTGGCCTACAAGAAAAGCATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CCA 72 bp TCTCCATATTCAGCCTCATACCTTGCACAAGGTTGTTaGGTAATATCTGGGCCCTTGAACTTCTGTATTCTC +
Preference number: 6 (lower is better)
Translates to: SPYSASYLAQGC*VISGPLNFCIL
Trigger: GAGAATACAGAAGTTCAAGGGCCCAGATATTACCCAACAACCTTGTGCAAGGTATGAGGCTGAATATGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CCA 72 bp TCCAACCTTCAGAAGCTTTTCGTTGTAATAGTCTGCTaGCAGCCTGGGGGCGTATTTAGTCCAGATATTAAA +
Preference number: 6 (lower is better)
Translates to: SNLQKLFVVIVC*QPGGVFSPDIK
Trigger: TTTAATATCTGGACTAAATACGCCCCCAGGCTGCCAGCAGACTATTACAACGAAAAGCTTCTGAAGGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000553778.6
ENST00000554621.1
CDS CCA 72 bp AGCAGTAATAGTAGAAAGAGGGGGATAAACCAGAATTaGTTTAGTTGTCTCCCCAATAGCACCACCGACAAG +
Preference number: 6 (lower is better)
Translates to: SSNSRKRGINQN*FSCLPNSTTDK
Trigger: CTTGTCGGTGGTGCTATTGGGGAGACAACTAAACCAATTCTGGTTTATCCCCCTCTTTCTACTATTACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000554108.6
CDS CCA 72 bp AGCCAGCTGCCTGGCTGTTCAGGAATGTCTCACCTCTaGGAAATCTCAACTACAAAATTAAAAAGCAACACT +
Preference number: 6 (lower is better)
Translates to: SQLPGCSGMSHL*EISTTKLKSNT
Trigger: AGTGTTGCTTTTTAATTTTGTAGTTGAGATTTCCCAGAGGTGAGACATTCCTGAACAGCCAGGCAGCTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554621.1
CDS CAA 72 bp CTTCTCTCCATATTCAGCCTCATACCTTGCACAAGGTaGTTGGGTAATATCTGGGCCCTTGAACTTCTGTAT +
Preference number: 6 (lower is better)
Translates to: LLSIFSLIPCTR*LGNIWALELLY
Trigger: ATACAGAAGTTCAAGGGCCCAGATATTACCCAACAACCTTGTGCAAGGTATGAGGCTGAATATGGAGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CAA 72 bp CCTGAGAGTTCAGATGTAACATATTGCTTTGTCAGTTaGAGTAGGTGTGTCTCCAACAAGGCCAGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: PESSDVTYCFVS*SRCVSNKASCS
Trigger: TGAACAGCTGGCCTTGTTGGAGACACACCTACTCAAACTGACAAAGCAATATGTTACATCTGAACTCTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000524981.9
ENST00000550977.2
ENST00000554108.6
ENST00000637336.1
CDS CAA 90 bp AGTTATCTTCTCTCCATATTCAGCCTCATACCTTGCACAAGGTTGTaGGGTAATATCTGGGCCCTTGAACTTCTGTATTCTCAGCAGAAG +
Preference number: 6 (lower is better)
Translates to: SYLLSIFSLIPCTRL*GNIWALELLYSQQK
Trigger: CTTCTGCTGAGAATACAGAAGTTCAAGGGCCCAGATATTACCCAACAACCTTGTGCAAGGTATGAGGCTGAATATGGAGAGAAGATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS TCA 72 bp TATCTGAGAAGAGTTCAATGCCTGGGAGAAGCTGAGTaGTTTCATATTGAGCATAGCAACGTTCAGCTTTGG +
Preference number: 6 (lower is better)
Translates to: YLRRVQCLGEAE*FHIEHSNVQLW
Trigger: CCAAAGCTGAACGTTGCTATGCTCAATATGAAATCACTCAGCTTCTCCCAGGCATTGAACTCTTCTCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS TCA 72 bp TGTAACAATGGGTCCAGTTTGCAGTATTCGCCTATTTaGATCAGAAAGAGCTTCCAAGACAGCCAGAAACTG +
Preference number: 6 (lower is better)
Translates to: CNNGSSLQYSPI*IRKSFQDSQKL
Trigger: CAGTTTCTGGCTGTCTTGGAAGCTCTTTCTGATTCAAATAGGCGAATACTGCAAACTGGACCCATTGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS GCA 72 bp ATAAATTGTGCTATCTTTGCTGATATGACTGCTCCTTaGAAACACCCCCAGATGCCAACTCTTGACAGAAAC +
Preference number: 6 (lower is better)
Translates to: INCAIFADMTAP*KHPQMPTLDRN
Trigger: GTTTCTGTCAAGAGTTGGCATCTGGGGGTGTTTGCAAGGAGCAGTCATATCAGCAAAGATAGCACAATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CAA 90 bp GTCTATCCAGGGGAGGAATGTACCATTGAAAGCAAAGTTCTTTGTTaGAAGCTTGCGTTACCATTTCTATTGGCGTTATGTCCACACAAG +
Preference number: 6 (lower is better)
Translates to: VYPGEECTIESKVLC*KLALPFLLALCPHK
Trigger: CTTGTGTGGACATAACGCCAATAGAAATGGTAACGCAAGCTTCAAACAAAGAACTTTGCTTTCAATGGTACATTCCTCCCCTGGATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS GCA 72 bp TCTTCCTGGGATTTTGAGGAACTCATTAATTCCAGTTaGCTTAACTCATCAATTTTAGCCAAAGCACGCCGA +
Preference number: 6 (lower is better)
Translates to: SSWDFEELINSS*LNSSILAKARR
Trigger: TCGGCGTGCTTTGGCTAAAATTGATGAGTTAAGGCAACTGGAATTAATGAGTTCCTCAAAATCCCAGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS GCA 72 bp TCAGGTTTTCATCACTGTCGCAGACCAGCTGGTAGTTaGACATATTTTTGCCACTCAAAGCATGAAATTTCA +
Preference number: 6 (lower is better)
Translates to: SGFHHCRRPAGS*TYFCHSKHEIS
Trigger: TGAAATTTCATGCTTTGAGTGGCAAAAATATGTGCAACTACCAGCTGGTCTGCGACAGTGATGAAAACCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553778.6
CDS CCA 72 bp ATTGTGGCCTCTCGAAAATATCTTCGCGATTCTTCCTaGGATTTTGAGGAACTCATTAATTCCAGTTGCCTT +
Preference number: 6 (lower is better)
Translates to: IVASRKYLRDSS*DFEELINSSCL
Trigger: AAGGCAACTGGAATTAATGAGTTCCTCAAAATCCCAGGAAGAATCGCGAAGATATTTTCGAGAGGCCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000553778.6
CDS CAA 72 bp CACTTTTACCGTCAGCTGGTATCGCTTCTCCTGAATTaGGGAGATGATTATTGTTTAGCCGTACTTTTCCAT +
Preference number: 6 (lower is better)
Translates to: HFYRQLVSLLLN*GDDYCLAVLFH
Trigger: ATGGAAAAGTACGGCTAAACAATAATCATCTCCCAAATTCAGGAGAAGCGATACCAGCTGACGGTAAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000554108.6
CDS CAA 72 bp TTTTCTACCATCTGCGCTGTCACACACATCATCATTTaGGTACAAAAATGTACAGGAAGTCTGGAAGAGGAC +
Preference number: 6 (lower is better)
Translates to: FSTICAVTHIII*VQKCTGSLEED
Trigger: GTCCTCTTCCAGACTTCCTGTACATTTTTGTACCAAAATGATGATGTGTGTGACAGCGCAGATGGTAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS CAA 72 bp TTTTTGGCTCTTTCCTGCAGAGGCACTTACTTTCATTaGACAAAGGCTATCTCCAACCTTCAGAAGCTTTTC +
Preference number: 6 (lower is better)
Translates to: FLALSCRGTYFH*TKAISNLQKLF
Trigger: GAAAAGCTTCTGAAGGTTGGAGATAGCCTTTGTCAAATGAAAGTAAGTGCCTCTGCAGGAAAGAGCCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554621.1
CDS CAA 72 bp CAAAGCTCGCAGTATGTTTCTTCGAGCAGACAATACTaGGTAGTCCTTGCAAAACCACTATACACTTTATCA +
Preference number: 6 (lower is better)
Translates to: QSSQYVSSSRQY*VVLAKPLYTLS
Trigger: TGATAAAGTGTATAGTGGTTTTGCAAGGACTACCAAGTATTGTCTGCTCGAAGAAACATACTGCGAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000554108.6
ENST00000637336.1
CDS CAA 72 bp AGACTTCTTAGAAGAATCCTCCTCTGGCATTTCTTCTaGTTCATTACTACCATCAAACAGAGACTTGCATCC +
Preference number: 6 (lower is better)
Translates to: RLLRRILLWHFF*FITTIKQRLAS
Trigger: GGATGCAAGTCTCTGTTTGATGGTAGTAATGAACAAGAAGAAATGCCAGAGGAGGATTCTTCTAAGAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000554108.6
ENST00000637336.1
CDS CAA 72 bp AAAGTTCTTTGTTTGAAGCTTGCGTTACCATTTCTATaGGCGTTATGTCCACACAAGATGAGCCTGAAACAG +
Preference number: 6 (lower is better)
Translates to: KVLCLKLALPFL*ALCPHKMSLKQ
Trigger: CTGTTTCAGGCTCATCTTGTGTGGACATAACGCCAATAGAAATGGTAACGCAAGCTTCAAACAAAGAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS CAA 72 bp GGGGAGGAATGTACCATTGAAAGCAAAGTTCTTTGTTaGAAGCTTGCGTTACCATTTCTATTGGCGTTATGT +
Preference number: 6 (lower is better)
Translates to: GEECTIESKVLC*KLALPFLLALC
Trigger: ACATAACGCCAATAGAAATGGTAACGCAAGCTTCAAACAAAGAACTTTGCTTTCAATGGTACATTCCTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS CAA 72 bp ATGCAACCATTAGCCAGATCAAAAAGTCTCTCAAGATaGAATATAGACGGCAGTGAGATATCAAATGGGACC +
Preference number: 6 (lower is better)
Translates to: MQPLARSKSLSR*NIDGSEISNGT
Trigger: GGTCCCATTTGATATCTCACTGCCGTCTATATTCAATCTTGAGAGACTTTTTGATCTGGCTAATGGTTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS CAA 72 bp GATTCAGAATGGTTACTTGCTTTAGTGACTACTACCTaGCAATTTGTCCAGAAGCACAACAGCTATTCGATG +
Preference number: 6 (lower is better)
Translates to: DSEWLLALVTTT*QFVQKHNSYSM
Trigger: CATCGAATAGCTGTTGTGCTTCTGGACAAATTGCAAGGTAGTAGTCACTAAAGCAAGTAACCATTCTGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554821.1
CDS CAA 90 bp GTATACTTTCAAAGCTCGCAGTATGTTTCTTCGAGCAGACAATACTaGGTAGTCCTTGCAAAACCACTATACACTTTATCAGGATCTGTA +
Preference number: 6 (lower is better)
Translates to: VYFQSSQYVSSSRQY*VVLAKPLYTLSGSV
Trigger: TACAGATCCTGATAAAGTGTATAGTGGTTTTGCAAGGACTACCAAGTATTGTCTGCTCGAAGAAACATACTGCGAGCTTTGAAAGTATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000554108.6
ENST00000637336.1
CDS CAA 90 bp CCTGATAAAATGCAACCATTAGCCAGATCAAAAAGTCTCTCAAGATaGAATATAGACGGCAGTGAGATATCAAATGGGACCTCAGATAGT +
Preference number: 6 (lower is better)
Translates to: PDKMQPLARSKSLSR*NIDGSEISNGTSDS
Trigger: ACTATCTGAGGTCCCATTTGATATCTCACTGCCGTCTATATTCAATCTTGAGAGACTTTTTGATCTGGCTAATGGTTGCATTTTATCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000637336.1
CDS CAA 90 bp CTTAAAATTGATTCAGAATGGTTACTTGCTTTAGTGACTACTACCTaGCAATTTGTCCAGAAGCACAACAGCTATTCGATGCTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: LKIDSEWLLALVTTT*QFVQKHNSYSMLSL
Trigger: CAAGCTCAGCATCGAATAGCTGTTGTGCTTCTGGACAAATTGCAAGGTAGTAGTCACTAAAGCAAGTAACCATTCTGAATCAATTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554821.1
CDS CAA 90 bp ATGAACTTCTTTTTGGCTCTTTCCTGCAGAGGCACTTACTTTCATTaGACAAAGGCTATCTCCAACCTTCAGAAGCTTTTCGTTGTAATA +
Preference number: 6 (lower is better)
Translates to: MNFFLALSCRGTYFH*TKAISNLQKLFVVI
Trigger: TATTACAACGAAAAGCTTCTGAAGGTTGGAGATAGCCTTTGTCAAATGAAAGTAAGTGCCTCTGCAGGAAAGAGCCAAAAAGAAGTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554621.1
CDS TCA 72 bp CCTTTTCTTTTCTGCGAAGATGAGAAGACTTCCAAGTaGATGCAACGCCTGAACTTTAAGACTTCTTTGATT +
Preference number: 6 (lower is better)
Translates to: PFLFCEDEKTSK*MQRLNFKTSLI
Trigger: AATCAAAGAAGTCTTAAAGTTCAGGCGTTGCATTCACTTGGAAGTCTTCTCATCTTCGCAGAAAAGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS GCA 72 bp GTATGTTTCTTCGAGCAGACAATACTTGGTAGTCCTTaGAAAACCACTATACACTTTATCAGGATCTGTACA +
Preference number: 6 (lower is better)
Translates to: VCFFEQTILGSP*KTTIHFIRICT
Trigger: TGTACAGATCCTGATAAAGTGTATAGTGGTTTTGCAAGGACTACCAAGTATTGTCTGCTCGAAGAAACATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000554108.6
ENST00000637336.1
CDS GCA 72 bp GCCAGCTGTTCATTTATCTTTTCAGGCAGTAGTATCTaGTGTGGCTTCTTAGTCTTTAAAGACTTCTTAGAA +
Preference number: 6 (lower is better)
Translates to: ASCSFIFSGSSI*CGFLVFKDFLE
Trigger: TTCTAAGAAGTCTTTAAAGACTAAGAAGCCACAGCAGATACTACTGCCTGAAAAGATAAATGAACAGCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000524981.9
ENST00000550977.2
ENST00000554108.6
ENST00000637336.1
CDS CCA 72 bp GAAAGCAACTTTCTGCTGTGTCGGATTGATCTGTTATaGTATTTGGATTTTTCCAGTGTCTCTCTAAAACAC +
Preference number: 6 (lower is better)
Translates to: ESNFLLCRIDLL*YLDFSSVSLKH
Trigger: GTGTTTTAGAGAGACACTGGAAAAATCCAAATACCATAACAGATCAATCCGACACAGCAGAAAGTTGCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CAA 72 bp AACTTTCTGCTGTGTCGGATTGATCTGTTATGGTATTaGGATTTTTCCAGTGTCTCTCTAAAACACCTCAAG +
Preference number: 6 (lower is better)
Translates to: NFLLCRIDLLWY*DFSSVSLKHLK
Trigger: CTTGAGGTGTTTTAGAGAGACACTGGAAAAATCCAAATACCATAACAGATCAATCCGACACAGCAGAAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS CAA 72 bp ATTGTGATAAATTATGGGAGCAAGAAGTCCATAACATaGAGTCACAGCTTGAAGGGCATAGCTGGAATCATT +
Preference number: 6 (lower is better)
Translates to: IVINYGSKKSIT*SHSLKGIAGII
Trigger: AATGATTCCAGCTATGCCCTTCAAGCTGTGACTCAATGTTATGGACTTCTTGCTCCCATAATTTATCACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524981.9
ENST00000554108.6
ENST00000637336.1
CDS CAA 90 bp CGGCTGTATTCTGAAGAGATAAGCATTTTTAGCAAATCTGTGCAGTaGCTTGTTGCTTCAATGGTTGAAGAATTAATCTTAAGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: RLYSEEISIFSKSVQ*LVASMVEELILSCF
Trigger: GAAGCAGCTTAAGATTAATTCTTCAACCATTGAAGCAACAAGCAACTGCACAGATTTGCTAAAAATGCTTATCTCTTCAGAATACAGCCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS TCA 72 bp TGTTCTGTATACCTCTCATGTGAAACTGTATTGAACTaGATGGCAAGAGATACTAGTGTTTCCCATTTTTCC +
Preference number: 6 (lower is better)
Translates to: CSVYLSCETVLN*MARDTSVSHFS
Trigger: GGAAAAATGGGAAACACTAGTATCTCTTGCCATTCAGTTCAATACAGTTTCACATGAGAGGTATACAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS TCA 72 bp TTCCTAAAGATTCCAATATTTCACTTAACCGTAATGTaGCTTCTGCCACTACCACAATGTCAATGTCTTCCA +
Preference number: 6 (lower is better)
Translates to: FLKIPIFHLTVM*LLPLPQCQCLP
Trigger: TGGAAGACATTGACATTGTGGTAGTGGCAGAAGTCACATTACGGTTAAGTGAAATATTGGAATCTTTAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524981.9
ENST00000554108.6
CDS GCA 72 bp CATTTCAAATCAACCACATTTACATCATCCAAAGGATaGTCAAAGGTAAGACTAGAACCACCGTTGTCATTT +
Preference number: 6 (lower is better)
Translates to: HFKSTTFTSSKG*SKVRLEPPLSF
Trigger: AAATGACAACGGTGGTTCTAGTCTTACCTTTGAGCATCCTTTGGATGATGTAAATGTGGTTGATTTGAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS GCA 72 bp CTTGTTGCTTCAATGGTTGAAGAATTAATCTTAAGCTaGTTCCCAATGAAATTTCGGCAAGTTATCTTCTCT +
Preference number: 6 (lower is better)
Translates to: LVASMVEELILS*FPMKFRQVIFS
Trigger: AGAGAAGATAACTTGCCGAAATTTCATTGGGAAGCAGCTTAAGATTAATTCTTCAACCATTGAAGCAACAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1
CDS TCA 72 bp TCTCCAAAAGCTAGCATCTGTTCAGTTAGAATGCTATaGGCCCGAGTTAACAAATTTAATTTTCCTGTTTTT +
Preference number: 6 (lower is better)
Translates to: SPKASICSVRML*ARVNKFNFPVF
Trigger: AAAAACAGGAAAATTAAATTTGTTAACTCGGGCTCATAGCATTCTAACTGAACAGATGCTAGCTTTTGGAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342887.1
ENST00000524981.9
ENST00000637336.1