Pregenerated sensors for CFAP53 (Homo sapiens)
Ensembl gene IDs: ENSG00000172361Ensembl transcript IDs: ENST00000398545.5
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCCAACCGTGGCGACCTaGGGGACCCGCTTCCGCGAC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFPTVAT*GTRFRD Trigger: GTCGCGGAAGCGGGTCCCGCAGGTCGCCACGGTTGG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCCTCCCGCTGTACGGTaGCAAACCGCTGGCTGTACA | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFPPAVR*QTAGCT Trigger: TGTACAGCCAGCGGTTTGGCACCGTACAGCGGGAGG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCGCAGCACTTGATGGGTaGACAGGACCTCCTGGACCT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFAALDG*TGPPGP Trigger: AGGTCCAGGAGGTCCTGTCCACCCATCAAGTGCTGC...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCACGGTGGAAGCTTACTaGGGCATGCCTTGCGCATGG | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFTVEAY*GMPCAW Trigger: CCATGCGCAAGGCATGCCCCAGTAAGCTTCCACCGT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCAGCAGCTGTGTCGCCTaGCTTTGTGCCTTGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFSSCVA*LCALML Trigger: CAGCATCAAGGCACAAAGGCAGGCGACACAGCTGCT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCTCACGGAACTACGGTaGAAGCTTACTGGGGCATGC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLTELR*KLTGAC Trigger: GCATGCCCCAGTAAGCTTCCACCGTAGTTCCGTGAG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR TCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCTTGCACAGCATCCTTaGTTCTTGCTCGCACAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLAQHP*FLLAQG Trigger: GCCTTGTGCGAGCAAGAATCAAGGATGCTGTGCAAG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTGTCGCCTGCCTTTGTaGCTTGATGCTGGTGATCTG | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFCRLPL*LDAGDL Trigger: CAGATCACCAGCATCAAGGCACAAAGGCAGGCGACA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCACTTTCCACAAGGCGTaGCTCCTCTTCCTTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFTFHKA*LLFLQQ Trigger: CTGCTGAAGGAAGAGGAGGCACGCCTTGTGGAAAGT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCACGGTGCCAAACCGCTaGCTGTACATTTTCGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFTVPNR*LYIFES Trigger: GGACTCGAAAATGTACAGCCAGCGGTTTGGCACCGT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTGTCTCCTCGCCTCTTaGGCTTCTCGCTTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFCLLAS*ASRFSL Trigger: CAAGGAAAAGCGAGAAGCCCAAGAGGCGAGGAGACA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCGTGGACAGGACCTCCTaGACCTTGTCCAAACACATC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFVDRTS*TLSKHI Trigger: GATGTGTTTGGACAAGGTCCAGGAGGTCCTGTCCAC...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCAAGCTTACTGGGGCATaGCTTGCGCATGGGATGAAT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFKLTGA*LAHGMN Trigger: ATTCATCCCATGCGCAAGGCATGCCCCAGTAAGCTT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCGGATTCTTTCTAGATaGTGCTCAGCTCCTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFRILSR*CSAPWP Trigger: AGGCCAAGGAGCTGAGCACCATCTAGAAAGAATCCG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCTTCTCGCTTTTCCTTaGCTAATCGGTCTTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLLAFP*LIGLPP Trigger: GGGAGGAAGACCGATTAGCCAAGGAAAAGCGAGAAG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTGCTTCCTGTACTCCTaGGCTAAACGTTGGCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFCFLYS*AKRWRL Trigger: AAGACGCCAACGTTTAGCCCAGGAGTACAGGAAGCA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCGGCATGCCTTGCGCATaGGATGAATGTTTTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFGMPCA*DECFEA Trigger: TGCCTCAAAACATTCATCCCATGCGCAAGGCATGCC...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR TCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCGCGATCCCGCTCACTTaGCTTAATGGAAGCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFAIPLT*LNGSQN Trigger: ATTTTGGCTTCCATTAAGTCAAGTGAGCGGGATCGC...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCATCTTGCAGTCATTGTaGTGGTCCCACTCAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFILQSL*WSHSAF Trigger: GAAAGCTGAGTGGGACCAGCACAATGACTGCAAGAT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCAGCATCCTTGATTCTTaGTCGCACAAGGCTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFSILDS*SHKAVQ Trigger: TTGGACAGCCTTGTGCGAGCAAGAATCAAGGATGCT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTCTTCCACCAGCTTTTaGCTGCTCAGCTCCTCATTA | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFSSTSF*LLSSSL Trigger: TAATGAGGAGCTGAGCAGGCAAAAGCTGGTGGAAGA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTTTCTCTTCCTTCTCTaGTTCTTGGGACTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFFLFLL*FLGLLL Trigger: CAGCAGCAGTCCCAAGAAGCAGAGAAGGAAGAGAAA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCGTTTGCTGCTACACCTaGTTCAAACTCTCGGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFVCCYT*FKLSAF Trigger: AAACGCCGAGAGTTTGAAGCAGGTGTAGCAGCAAAC...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTACTGGGGCATGCCTTaGGCATGGGATGAATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFYWGMP*AWDECF Trigger: AAAACATTCATCCCATGCGCAAGGCATGCCCCAGTA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTTGCAGTCATTGTGCTaGTCCCACTCAGCTTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLQSLC*SHSAFK Trigger: CTTGAAAGCTGAGTGGGACCAGCACAATGACTGCAA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCTTCCTCCCAGAGTTTaGAGAACATCTGCTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLPPRV*RTSALP Trigger: TGGAAGAGCAGATGTTCTCCAAACTCTGGGAGGAAG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTCCTGGGCTAAACGTTaGCGTCTTGCAAAATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFSWAKR*RLAKFS Trigger: GGAGAATTTTGCAAGACGCCAACGTTTAGCCCAGGA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR TCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCATAGCATTATGCTTCTaGTGGCTGCGTCGGATTCTT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFIALCF*WLRRIL Trigger: AAGAATCCGACGCAGCCATCAGAAGCATAATGCTAT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR TCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCGTTTTCTTGTACACATaGCCTCATCCACAAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFVFLYT*PHPQAV Trigger: GACAGCTTGTGGATGAGGTCATGTGTACAAGAAAAC...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCAGTTTGGAGAACATCTaGTCTTCCACCAGCTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFSLENI*SSTSFC Trigger: GCAAAAGCTGGTGGAAGAGCAGATGTTCTCCAAACT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCATTCTTTCTAGATGGTaGTCAGCTCCTTGGCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFILSRW*SAPWPL Trigger: TAAAGGCCAAGGAGCTGAGCACCATCTAGAAAGAAT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTATGCTTCTGATGGCTaGGTCGGATTCTTTCTAGAT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFYASDG*VGFFLD Trigger: ATCTAGAAAGAATCCGACGCAGCCATCAGAAGCATA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCATTAAATGCAATCTGTaGTTTCCGCTCCTCACACAC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFIKCNL*FPLLTH Trigger: GTGTGTGAGGAGCGGAAAGCACAGATTGCATTTAAT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCACACATCTTGTTTGCTaGTACACCTGCTTCAAACTC | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFTHLVC*YTCFKL Trigger: GAGTTTGAAGCAGGTGTAGCAGCAAACAAGATGTGT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR TCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTCTCTGTATTCCTGCTaGATATGTTCTATCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFSLYSC*ICSILS Trigger: AGAGAGGATAGAACATATTCAGCAGGAATACAGAGA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR TCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCAAGAAAAGATATATTaGTGCTCACGGAACTACGGT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFQEKIY*CSRNYG Trigger: ACCGTAGTTCCGTGAGCATCAATATATCTTTTCTTG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCAAACACATCTTGTTTaGTGCTACACCTGCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFQTHLV*CYTCFK Trigger: TTTGAAGCAGGTGTAGCAGCAAACAAGATGTGTTTG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR TCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTCACACACCTTCTTCTaGTGGATAGATAACAATTCA | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFSHTFF*WIDNNS Trigger: TGAATTGTTATCTATCCATCAGAAGAAGGTGTGTGA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTTAATGATAAACCCTTaGACAGCATCCTTGATTCTT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLMINP*TASLIL Trigger: AAGAATCAAGGATGCTGTGCAAGGGTTTATCATTAA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTTCCTCACGTCTCTGTaGCAAATATTTATGGTATAT | + |
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Preference number: 4 (lower is better) Translates to: VCELQNRHRFIQRKKIMFFLTSL*QIFMVY Trigger: ATATACCATAAATATTTGGCACAGAGACGTGAGGAA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CCA 90 bp | GCTCACGGAACTACGGTGGAAGCTTACTGGGGCATGCCTTGCGCATaGGATGAATGTTTTGAGGCAGCACTTGATGGGTGGACAGGACCT | + |
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Preference number: 5 (lower is better) Translates to: AHGTTVEAYWGMPCA*DECFEAALDGWTGP Trigger: AGGTCCTGTCCACCCATCAAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGTAAGCTTCCACCGTAGTTCCGTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS GCA 90 bp | ATTGATGCTCACGGAACTACGGTGGAAGCTTACTGGGGCATGCCTTaGGCATGGGATGAATGTTTTGAGGCAGCACTTGATGGGTGGACA | + |
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Preference number: 5 (lower is better) Translates to: IDAHGTTVEAYWGMP*AWDECFEAALDGWT Trigger: TGTCCACCCATCAAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGTAAGCTTCCACCGTAGTTCCGTGAGCATCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CCA 90 bp | ATGCCTTGCGCATGGGATGAATGTTTTGAGGCAGCACTTGATGGGTaGACAGGACCTCCTGGACCTTGTCCAAACACATCTTGTTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: MPCAWDECFEAALDG*TGPPGPCPNTSCLL Trigger: CAGCAAACAAGATGTGTTTGGACAAGGTCCAGGAGGTCCTGTCCACCCATCAAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS GCA 90 bp | GATATATTGATGCTCACGGAACTACGGTGGAAGCTTACTGGGGCATaGCTTGCGCATGGGATGAATGTTTTGAGGCAGCACTTGATGGGT | + |
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Preference number: 5 (lower is better) Translates to: DILMLTELRWKLTGA*LAHGMNVLRQHLMG Trigger: ACCCATCAAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGTAAGCTTCCACCGTAGTTCCGTGAGCATCAATATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS TCA 90 bp | TCCCGCTCACTTGACTTAATGGAAGCCAAAATAGCATTATGCTTCTaGTGGCTGCGTCGGATTCTTTCTAGATGGTGCTCAGCTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SRSLDLMEAKIALCF*WLRRILSRWCSAPW Trigger: CCAAGGAGCTGAGCACCATCTAGAAAGAATCCGACGCAGCCATCAGAAGCATAATGCTATTTTGGCTTCCATTAAGTCAAGTGAGCGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CCA 90 bp | AAGAAAAGATATATTGATGCTCACGGAACTACGGTGGAAGCTTACTaGGGCATGCCTTGCGCATGGGATGAATGTTTTGAGGCAGCACTT | + |
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Preference number: 5 (lower is better) Translates to: KKRYIDAHGTTVEAY*GMPCAWDECFEAAL Trigger: AAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGTAAGCTTCCACCGTAGTTCCGTGAGCATCAATATATCTTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS TCA 90 bp | TCATTAAATGCAATCTGTGCTTTCCGCTCCTCACACACCTTCTTCTaGTGGATAGATAACAATTCAACACGGAGCTCCTCACAGCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: SLNAICAFRSSHTFF*WIDNNSTRSSSQRS Trigger: GGAACGCTGTGAGGAGCTCCGTGTTGAATTGTTATCTATCCATCAGAAGAAGGTGTGTGAGGAGCGGAAAGCACAGATTGCATTTAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCTCACGATCACCACTTaGGGGGTGGGGCCCTTAACC | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLTITT*GVGPLT Trigger: GGTTAAGGGCCCCACCCCCAAAGTGGTGATCGTGAG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCATGGTGCTCAGCTCCTaGGCCTTTAGGAGGCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFMVLSS*AFRRLG Trigger: TCCAAGCCTCCTAAAGGCCAAGGAGCTGAGCACCAT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCTGTCTCCTCGCCTCTaGGGCTTCTCGCTTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLSPRL*GFSLFL Trigger: AAGGAAAAGCGAGAAGCCCAAGAGGCGAGGAGACAG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCTGTGTCGCCTGCCTTaGTGCCTTGATGCTGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLCRLP*CLDAGD Trigger: ATCACCAGCATCAAGGCACAAAGGCAGGCGACACAG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCGTTTTGAGGCAGCACTaGATGGGTGGACAGGACCTC | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFVLRQH*MGGQDL Trigger: GAGGTCCTGTCCACCCATCAAGTGCTGCCTCAAAAC...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTGGCCTTTAGGAGGCTaGGATCTCACGATCACCACT | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFWPLGG*DLTITT Trigger: AGTGGTGATCGTGAGATCCAAGCCTCCTAAAGGCCA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCCTTGCACAGCATCCTaGATTCTTGCTCGCACAAGG | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFPCTAS*ILARTR Trigger: CCTTGTGCGAGCAAGAATCAAGGATGCTGTGCAAGG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCGCTTCTCGCTTTTCCTaGGCTAATCGGTCTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFASRFS*ANRSSS Trigger: GGAGGAAGACCGATTAGCCAAGGAAAAGCGAGAAGC...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCAGGCTGTCCAAAATCTaGCAGTCATTGTGCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFRLSKI*QSLCWS Trigger: GGACCAGCACAATGACTGCAAGATTTTGGACAGCCT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTCTTCCTCCCAGAGTTaGGAGAACATCTGCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFSSSQS*ENICSS Trigger: GGAAGAGCAGATGTTCTCCAAACTCTGGGAGGAAGA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTCAAGTCTCAGCTCCTaGTCCTTCTCAGCCAACTTC | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFSSLSS*SFSANF Trigger: GAAGTTGGCTGAGAAGGACAAGGAGCTGAGACTTGA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCTGCTGGTAGGCGATTaGCATCTGAAGTTGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLLVGD*HLKLLP Trigger: AGGAAGCAACTTCAGATGCAAATCGCCTACCAGCAG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCAAAATCTTGCAGTCATaGTGCTGGTCCCACTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFKILQS*CWSHSA Trigger: AGCTGAGTGGGACCAGCACAATGACTGCAAGATTTT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCAGGACCTCCTGGACCTaGTCCAAACACATCTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFRTSWT*SKHILF Trigger: AAACAAGATGTGTTTGGACAAGGTCCAGGAGGTCCT...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCATGGGATGAATGTTTaGAGGCAGCACTTGATGGGT | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFHGMNV*RQHLMG Trigger: ACCCATCAAGTGCTGCCTCAAAACATTCATCCCATG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTTGTCCAAACACATCTaGTTTGCTGCTACACCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLSKHI*FAATPA Trigger: AGCAGGTGTAGCAGCAAACAAGATGTGTTTGGACAA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTGTTTAATCTGTGCGTaGTTACTTTCCACAAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFCLICA*LLSTRR Trigger: ACGCCTTGTGGAAAGTAACAACGCACAGATTAAACA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCGCCAACTTCTTTGCCTaGTCTTCCTCTAATATTCTG | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFANFFA*SSSNIL Trigger: CAGAATATTAGAGGAAGACAAGGCAAAGAAGTTGGC...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCTCTCAGCCAACTTCTTaGCCTTGTCTTCCTCTAATA | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFSQPTS*PCLPLI Trigger: TATTAGAGGAAGACAAGGCAAAGAAGTTGGCTGAGA...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCTAAACGTTGGCGTCTaGCAAAATTCTCCTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFLNVGV*QNSPSL Trigger: AAGAGAAGGAGAATTTTGCAAGACGCCAACGTTTAG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS-3UTR CAA 90 bp | GTCTGTGAACTCCAAAATAGGCACAGGTTTATTCAAAGGAAGAAAATTATGTTCCCAAGAAAAGATATATaGATGCTCACGGAACTACGG | + |
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Preference number: 5 (lower is better) Translates to: VCELQNRHRFIQRKKIMFPRKDI*MLTELR Trigger: CCGTAGTTCCGTGAGCATCAATATATCTTTTCTTGG...GAACATAATTTTCTTCCTTTGAATAAACCTGTGCCTATTTTGGAGTTCACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CAA 90 bp | CGGTGGAAGCTTACTGGGGCATGCCTTGCGCATGGGATGAATGTTTaGAGGCAGCACTTGATGGGTGGACAGGACCTCCTGGACCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: RWKLTGACLAHGMNV*RQHLMGGQDLLDLV Trigger: GACAAGGTCCAGGAGGTCCTGTCCACCCATCAAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGTAAGCTTCCACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CAA 72 bp | CTTACTGGGGCATGCCTTGCGCATGGGATGAATGTTTaGAGGCAGCACTTGATGGGTGGACAGGACCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LTGACLAHGMNV*RQHLMGGQDLL Trigger: CAGGAGGTCCTGTCCACCCATCAAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS GCA 72 bp | ATGCTCACGGAACTACGGTGGAAGCTTACTGGGGCATaGCTTGCGCATGGGATGAATGTTTTGAGGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: MLTELRWKLTGA*LAHGMNVLRQH Trigger: GTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGTAAGCTTCCACCGTAGTTCCGTGAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CCA 72 bp | ACTACGGTGGAAGCTTACTGGGGCATGCCTTGCGCATaGGATGAATGTTTTGAGGCAGCACTTGATGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TTVEAYWGMPCA*DECFEAALDGW Trigger: CCACCCATCAAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGTAAGCTTCCACCGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CAA 72 bp | TGCCTTGCGCATGGGATGAATGTTTTGAGGCAGCACTaGATGGGTGGACAGGACCTCCTGGACCTTGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: CLAHGMNVLRQH*MGGQDLLDLVQ Trigger: TTGGACAAGGTCCAGGAGGTCCTGTCCACCCATCAAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CAA 90 bp | ACTGGGGCATGCCTTGCGCATGGGATGAATGTTTTGAGGCAGCACTaGATGGGTGGACAGGACCTCCTGGACCTTGTCCAAACACATCTT | + |
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Preference number: 6 (lower is better) Translates to: TGACLAHGMNVLRQH*MGGQDLLDLVQTHL Trigger: AAGATGTGTTTGGACAAGGTCCAGGAGGTCCTGTCCACCCATCAAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS GCA 72 bp | GCTAATCGGTCTTCCTCCCAGAGTTTGGAGAACATCTaGTCTTCCACCAGCTTTTGCCTGCTCAGCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ANRSSSQSLENI*SSTSFCLLSSS Trigger: TGAGGAGCTGAGCAGGCAAAAGCTGGTGGAAGAGCAGATGTTCTCCAAACTCTGGGAGGAAGACCGATTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS GCA 72 bp | CACGGAACTACGGTGGAAGCTTACTGGGGCATGCCTTaGGCATGGGATGAATGTTTTGAGGCAGCACTTGAT | + |
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Preference number: 6 (lower is better) Translates to: HGTTVEAYWGMP*AWDECFEAALD Trigger: ATCAAGTGCTGCCTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGTAAGCTTCCACCGTAGTTCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CCA 72 bp | CTGCGTCGGATTCTTTCTAGATGGTGCTCAGCTCCTTaGCCTTTAGGAGGCTTGGATCTCACGATCACCACT | + |
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Preference number: 6 (lower is better) Translates to: LRRILSRWCSAP*PLGGLDLTITT Trigger: AGTGGTGATCGTGAGATCCAAGCCTCCTAAAGGCCAAGGAGCTGAGCACCATCTAGAAAGAATCCGACGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CAA 72 bp | TTCTGTCTCCTCGCCTCTTGGGCTTCTCGCTTTTCCTaGGCTAATCGGTCTTCCTCCCAGAGTTTGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: FCLLASWASRFS*ANRSSSQSLEN Trigger: GTTCTCCAAACTCTGGGAGGAAGACCGATTAGCCAAGGAAAAGCGAGAAGCCCAAGAGGCGAGGAGACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CAA 90 bp | ATCAGCTCTTTCTGTCTCCTCGCCTCTTGGGCTTCTCGCTTTTCCTaGGCTAATCGGTCTTCCTCCCAGAGTTTGGAGAACATCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ISSFCLLASWASRFS*ANRSSSQSLENICS Trigger: AGAGCAGATGTTCTCCAAACTCTGGGAGGAAGACCGATTAGCCAAGGAAAAGCGAGAAGCCCAAGAGGCGAGGAGACAGAAAGAGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CCA 72 bp | GCATGGGATGAATGTTTTGAGGCAGCACTTGATGGGTaGACAGGACCTCCTGGACCTTGTCCAAACACATCT | + |
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Preference number: 6 (lower is better) Translates to: AWDECFEAALDG*TGPPGPCPNTS Trigger: AGATGTGTTTGGACAAGGTCCAGGAGGTCCTGTCCACCCATCAAGTGCTGCCTCAAAACATTCATCCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CCA 72 bp | CCAAGAAAAGATATATTGATGCTCACGGAACTACGGTaGAAGCTTACTGGGGCATGCCTTGCGCATGGGATG | + |
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Preference number: 6 (lower is better) Translates to: PRKDILMLTELR*KLTGACLAHGM Trigger: CATCCCATGCGCAAGGCATGCCCCAGTAAGCTTCCACCGTAGTTCCGTGAGCATCAATATATCTTTTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS CCA 72 bp | TATATTGATGCTCACGGAACTACGGTGGAAGCTTACTaGGGCATGCCTTGCGCATGGGATGAATGTTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: YIDAHGTTVEAY*GMPCAWDECFE Trigger: CTCAAAACATTCATCCCATGCGCAAGGCATGCCCCAGTAAGCTTCCACCGTAGTTCCGTGAGCATCAATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS TCA 72 bp | GCAATCTGTGCTTTCCGCTCCTCACACACCTTCTTCTaGTGGATAGATAACAATTCAACACGGAGCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: AICAFRSSHTFF*WIDNNSTRSSS Trigger: TGAGGAGCTCCGTGTTGAATTGTTATCTATCCATCAGAAGAAGGTGTGTGAGGAGCGGAAAGCACAGATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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| CDS TCA 72 bp | CTTGACTTAATGGAAGCCAAAATAGCATTATGCTTCTaGTGGCTGCGTCGGATTCTTTCTAGATGGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LDLMEAKIALCF*WLRRILSRWCS Trigger: TGAGCACCATCTAGAAAGAATCCGACGCAGCCATCAGAAGCATAATGCTATTTTGGCTTCCATTAAGTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398545.5 |
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