RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP52 (Homo sapiens)

Ensembl gene IDs: ENSG00000166596

Ensembl transcript IDs: ENST00000352665.10, ENST00000396219.7, ENST00000572333.5, ENST00000574097.1, ENST00000574937.5, ENST00000575247.5, ENST00000576499.1, ENST00000576630.5, ENST00000576714.1

Found 450 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTaGGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTA +
Preference number: 1 (lower is better)
Translates to: HPGTWRRSHWWHCQH*GRLQGCHRWHLSWL
Trigger: TAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
3UTR GCA 90 bp CCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTaGAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACAC +
Preference number: 1 (lower is better)
Translates to: PGEDHIGGIANIEAG*RAATDGISLGYAPH
Trigger: GTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
3UTR CCA 90 bp CATGCTGAAATGATGCTTTTGCCGTCCCTCATGAAGTCGATGCCGTaGCAGGTCATGTTGGGCACGGTGATCCGCAGCAGCTCCCTGTTG +
Preference number: 1 (lower is better)
Translates to: HAEMMLLPSLMKSMP*QVMLGTVIRSSSLL
Trigger: CAACAGGGAGCTGCTGCGGATCACCGTGCCCAACATGACCTGCCACGGCATCGACTTCATGAGGGACGGCAAAAGCATCATTTCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR TCA 90 bp GCAGGTCATGTTGGGCACGGTGATCCGCAGCAGCTCCCTGTTGGATaGTGTGTGCCACACCCTGATATCCTTCTTGGCACAGGTTGCAAA +
Preference number: 1 (lower is better)
Translates to: AGHVGHGDPQQLPVG*CVPHPDILLGTGCK
Trigger: TTTGCAACCTGTGCCAAGAAGGATATCAGGGTGTGGCACACATCATCCAACAGGGAGCTGCTGCGGATCACCGTGCCCAACATGACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR GCA 90 bp ATGTTGGGCACGGTGATCCGCAGCAGCTCCCTGTTGGATGATGTGTaGCACACCCTGATATCCTTCTTGGCACAGGTTGCAAATAGCTCA +
Preference number: 1 (lower is better)
Translates to: MLGTVIRSSSLLDDV*HTLISFLAQVANSS
Trigger: TGAGCTATTTGCAACCTGTGCCAAGAAGGATATCAGGGTGTGGCACACATCATCCAACAGGGAGCTGCTGCGGATCACCGTGCCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CCA 90 bp GCAACGCCAAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATaGGTACTTCCATCGCAAAATGGCTCCATCGGCACTTACACTAAC +
Preference number: 1 (lower is better)
Translates to: ATPRLRDISSASGGI*VLPSQNGSIGTYTN
Trigger: GTTAGTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAGTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCTTGGCGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
3UTR CCA 90 bp CAAAATGGCTCCATCGGCACTTACACTAACAATATATTGATTTCCTaGACTTATGCGGATGCGTGTGATGTTGCCACTGTGTCCCACCCC +
Preference number: 1 (lower is better)
Translates to: QNGSIGTYTNNILIS*TYADACDVATVSHP
Trigger: GGGGTGGGACACAGTGGCAACATCACACGCATCCGCATAAGTCCAGGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
3UTR CCA 90 bp TCTATTTGGAAGATCCAATTCCCATACTCGAATTGTCCCACATGTTaGCCAGGATGGTCTCCATCTCTTGACCTCGTGATCCATCCGCTT +
Preference number: 1 (lower is better)
Translates to: SIWKIQFPYSNCPTC*PGWSPSLDLVIHPL
Trigger: AAGCGGATGGATCACGAGGTCAAGAGATGGAGACCATCCTGGCCAACATGTGGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575247.5
3UTR TCA 90 bp TCAGCAGTGCCAAATGGAAAGACAATATCCTCGACAGCATCAAAGTaGCAAGTCGCTATGAGCGTCTCTTTGAAATCCGTGAAGCTGACA +
Preference number: 1 (lower is better)
Translates to: SAVPNGKTISSTASK*QVAMSVSLKSVKLT
Trigger: TGTCAGCTTCACGGATTTCAAAGAGACGCTCATAGCGACTTGTCACTTTGATGCTGTCGAGGATATTGTCTTTCCATTTGGCACTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR TCA 90 bp TTCCATCGCAAAATGGCTCCATCGGCACTTACACTAACAATATATTaGTTTCCTGGACTTATGCGGATGCGTGTGATGTTGCCACTGTGT +
Preference number: 1 (lower is better)
Translates to: FHRKMAPSALTLTIY*FPGLMRMRVMLPLC
Trigger: ACACAGTGGCAACATCACACGCATCCGCATAAGTCCAGGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
3UTR CCA 90 bp TCATCCACTCCAATACTCATGACTATTCTTTTCAACTGTCCTGTTTaGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCC +
Preference number: 1 (lower is better)
Translates to: SSTPILMTILFNCPV*HSVGQIFLFGRSNS
Trigger: GGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAATAGTCATGAGTATTGGAGTGGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
3UTR CCA 90 bp AATACTCATGACTATTCTTTTCAACTGTCCTGTTTGGCACTCAGTTaGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGAAT +
Preference number: 1 (lower is better)
Translates to: NTHDYSFQLSCLALS*PDFSIWKIQFPYSN
Trigger: ATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAATAGTCATGAGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
3UTR CAA 90 bp CCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTaGGCTATGCTCCACACCACCACACTTCCGTCATCTGGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: PTLRPAAGLPQMASL*AMLHTTTLPSSGPP
Trigger: AGGAGGCCCAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
3UTR CAA 90 bp CCGTGGCAGGTCATGTTGGGCACGGTGATCCGCAGCAGCTCCCTGTaGGATGATGTGTGCCACACCCTGATATCCTTCTTGGCACAGGTT +
Preference number: 2 (lower is better)
Translates to: PWQVMLGTVIRSSSL*DDVCHTLISFLAQV
Trigger: AACCTGTGCCAAGAAGGATATCAGGGTGTGGCACACATCATCCAACAGGGAGCTGCTGCGGATCACCGTGCCCAACATGACCTGCCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CAA 90 bp ATGCTTTTGCCGTCCCTCATGAAGTCGATGCCGTGGCAGGTCATGTaGGGCACGGTGATCCGCAGCAGCTCCCTGTTGGATGATGTGTGC +
Preference number: 2 (lower is better)
Translates to: MLLPSLMKSMPWQVM*GTVIRSSSLLDDVC
Trigger: GCACACATCATCCAACAGGGAGCTGCTGCGGATCACCGTGCCCAACATGACCTGCCACGGCATCGACTTCATGAGGGACGGCAAAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CAA 90 bp CCAGCAGTCATAAACATCTCATCCCGGCACCTGGAGAAGATCACATaGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: PAVINISSRHLEKIT*VALPTLRPAAGLPQ
Trigger: CTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTATGACTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
3UTR-3UTR TCA 90 bp ATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTGGGACCTTTCATGGTaGCACCTCTTTCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: IANIEAGCRAATDGISLGWDLSW*HLFPQA
Trigger: TGCCTGTGGAAAGAGGTGTCACCATGAAAGGTCCCA...GCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR-3UTR TCA 90 bp CCACCTGTGACAAAGTGCACCCCTTCCTGTGTGATATCCATGCCATTTATCGACTGGCATTGCCAACATTaGGGCCGGCTGCAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: PPVTKCTPSCVISMPFIDWHCQH*GRLQGC
Trigger: GCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCA...GTCGATAAATGGCATGGATATCACACAGGAAGGGGTGCACTTTGTCACAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CAA 90 bp ATAAACATCTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATaGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCT +
Preference number: 2 (lower is better)
Translates to: INISSRHLEKITLVA*PTLRPAAGLPQMAS
Trigger: AGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
3UTR-3UTR TCA 90 bp CGCCAAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATGGGTACTTCCATTCATGTTGGGCACGGTaGTCCGCAGCAGCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: RQGSETSHQLQEVYGYFHSCWAR*SAAAPC
Trigger: ACAGGGAGCTGCTGCGGATCACCGTGCCCAACATGA...ATGGAAGTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCTTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR-3UTR TCA 90 bp CGCACAAGGTCCCAAATGATACAAGTCCCATCGGTGCTGGCGGTGACACACTCCCGTTCCATGCTGAAATaGTGCTTTTGCCGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: RTRSQMIQVPSVLAVTHSRSMLK*CFCRPS
Trigger: TGAGGGACGGCAAAAGCATCATTTCAGCATGGAACG...GGAGTGTGTCACCGCCAGCACCGATGGGACTTGTATCATTTGGGACCTTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR-3UTR GCA 90 bp CCACCTGTGACAAAGTGCACCCCTTCCTGTGTGATATCCATGCCATTTATCGACAACATTGAGGCCGGCTaGAGGGCTGCCACAGATGGC +
Preference number: 2 (lower is better)
Translates to: PPVTKCTPSCVISMPFIDNIEAG*RAATDG
Trigger: GCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTT...GTCGATAAATGGCATGGATATCACACAGGAAGGGGTGCACTTTGTCACAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR-3UTR GCA 90 bp GTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATGGGTACTTCAACAGGACTGCGTaGAACGCCAAGGCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: VQRQGSETSHQLQEVYGYFNRTA*NAKAQR
Trigger: TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAA...GTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCTTGGCGTTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
3UTR-3UTR GCA 90 bp CATCTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGTTCAACAGGACTGCGTaGAACGCCAAGGCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: HLIPAPGEDHIGGIANIEFNRTA*NAKAQR
Trigger: TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAA...CTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CAA 90 bp CAAATGATACAAGTCCCATCGGTGCTGGCGGTGACACACTCCTCGTaGTTCCTCTTCACCCTAATGCAGGACACTGATGACTTGTGTTCC +
Preference number: 2 (lower is better)
Translates to: QMIQVPSVLAVTHSS*FLFTLMQDTDDLCS
Trigger: GGAACACAAGTCATCAGTGTCCTGCATTAGGGTGAAGAGGAACAACGAGGAGTGTGTCACCGCCAGCACCGATGGGACTTGTATCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR-3UTR GCA 90 bp AAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATGGGTACTTCCATCGCAAGTCTTCAACAGGACTaGGTGCAACGCCAAGGCTCA +
Preference number: 2 (lower is better)
Translates to: KAQRHLISFRRYMGTSIASLQQD*VQRQGS
Trigger: TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACT...TGCGATGGAAGTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
3UTR-3UTR GCA 90 bp TGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACGGGCACATGTCCAGGTaGTCTGAAGAGCCTGGGACC +
Preference number: 2 (lower is better)
Translates to: CLALSWPDFSIWKIQFPYGHMSR*SEEPGT
Trigger: GGTCCCAGGCTCTTCAGAGCACCTGGACATGTGCCC...GTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR-3UTR GCA 90 bp TCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGAATTGTCGGCCGGCTGCAGGGCTaGCACAGATGGCATCTCTCT +
Preference number: 2 (lower is better)
Translates to: SVGQIFLFGRSNSHTRIVGRLQG*HRWHLS
Trigger: AGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCC...GACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
3UTR-3UTR GCA 90 bp CGCCAAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATGGGTACTTCCATCTGTTGGATGATGTGTaGCACACCCTGATATCCTTC +
Preference number: 2 (lower is better)
Translates to: RQGSETSHQLQEVYGYFHLLDDV*HTLISF
Trigger: GAAGGATATCAGGGTGTGGCACACATCATCCAACAG...ATGGAAGTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCTTGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR-3UTR CCA 90 bp TGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGATGTACTCTCCAGACCTaGAGATGGCCAAGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: WHSVGQIFLFGRSNSHTRCTLQT*RWPSRR
Trigger: TCTCCTGCTTGGCCATCTCCAGGTCTGGAGAGTACA...TCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CAA 90 bp CTTCCATCGCAAAATGGCTCCATCGGCACTTACACTAACAATATATaGATTTCCTGGACTTATGCGGATGCGTGTGATGTTGCCACTGTG +
Preference number: 2 (lower is better)
Translates to: LPSQNGSIGTYTNNI*ISWTYADACDVATV
Trigger: CACAGTGGCAACATCACACGCATCCGCATAAGTCCAGGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
3UTR-3UTR CCA 90 bp GGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCAAGGTAGAAAAAGCTATCATCTCCAGACCTGGAGATaGCCAAGCAGGAGACGTTGT +
Preference number: 2 (lower is better)
Translates to: GSFLEYLQSWCQGRKSYHLQTWR*PSRRRC
Trigger: ACAACGTCTCCTGCTTGGCCATCTCCAGGTCTGGAG...ATGATAGCTTTTTCTACCTTGGCACCACGACTGGAGATATTCTAAAAATGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR-3UTR TCA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAGAGCTGTGAGAAATaGAGACTAGTGTTGGAGTTA +
Preference number: 2 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRQSCEK*RLVLEL
Trigger: TAACTCCAACACTAGTCTTCATTTCTCACAGCTCTG...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
3UTR-3UTR GCA 90 bp ATTCTTTTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGTCTTCAACAGGACTaGGTGCAACGCCAAGGCTCA +
Preference number: 2 (lower is better)
Translates to: ILFNCPVWHSVGQIFLFGSLQQD*VQRQGS
Trigger: TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACT...TCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CAA 90 bp TTTTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTaGGAAGATCCAATTCCCATACTCGAATTGTCCCACATGTTGGCC +
Preference number: 2 (lower is better)
Translates to: FSTVLFGTQLARFFY*EDPIPILELSHMLA
Trigger: GGCCAACATGTGGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575247.5
3UTR CAA 90 bp TTTTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTaGGAAGATCCAATTCCCATACTCGAATTGTCCCATTTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: FSTVLFGTQLARFFY*EDPIPILELSHFQQ
Trigger: CTGCTGGAAATGGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
3UTR-3UTR TCA 90 bp TTCTTTTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGAATATTTATTGCCTGAATaGGGACTGTGCAACCAAGAG +
Preference number: 2 (lower is better)
Translates to: FFSTVLFGTQLARFFYLEYLLPE*GLCNQE
Trigger: CTCTTGGTTGCACAGTCCTCATTCAGGCAATAAATA...TTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CAA 90 bp ATCATCCACTCCAATACTCATGACTATTCTTTTCAACTGTCCTGTTaGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTC +
Preference number: 2 (lower is better)
Translates to: IIHSNTHDYSFQLSC*ALSWPDFSIWKIQF
Trigger: GAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAATAGTCATGAGTATTGGAGTGGATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
3UTR GCA 72 bp CTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATaGTCCACACCACCACACTTCCGTCATCTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: LQGCHRWHLSWL*STPPHFRHLGL
Trigger: GAGGCCCAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
3UTR CCA 72 bp ATGATGCTTTTGCCGTCCCTCATGAAGTCGATGCCGTaGCAGGTCATGTTGGGCACGGTGATCCGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: MMLLPSLMKSMP*QVMLGTVIRSS
Trigger: GCTGCTGCGGATCACCGTGCCCAACATGACCTGCCACGGCATCGACTTCATGAGGGACGGCAAAAGCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR TCA 72 bp ACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTaGGGCCGGCTGCAGGGCTGCCACAGATGGCATCTC +
Preference number: 3 (lower is better)
Translates to: TWRRSHWWHCQH*GRLQGCHRWHL
Trigger: GAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
3UTR TCA 72 bp GTTGGGCACGGTGATCCGCAGCAGCTCCCTGTTGGATaGTGTGTGCCACACCCTGATATCCTTCTTGGCACA +
Preference number: 3 (lower is better)
Translates to: VGHGDPQQLPVG*CVPHPDILLGT
Trigger: TGTGCCAAGAAGGATATCAGGGTGTGGCACACATCATCCAACAGGGAGCTGCTGCGGATCACCGTGCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CCA 72 bp CTTGTCCGGAGGCGATGTACTCTCCAGACCTGGAGATaGCCAAGCAGGAGACGTTGTTGCCATGACCCTGTA +
Preference number: 3 (lower is better)
Translates to: LVRRRCTLQTWR*PSRRRCCHDPV
Trigger: TACAGGGTCATGGCAACAACGTCTCCTGCTTGGCCATCTCCAGGTCTGGAGAGTACATCGCCTCCGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR TCA 72 bp TCACTGGTGGTGGCGATGGCGGTGACGCCGATCCTGTaGGCATTGTTAATGACATACATCAGTCGGCCTGTC +
Preference number: 3 (lower is better)
Translates to: SLVVAMAVTPIL*ALLMTYISRPV
Trigger: GACAGGCCGACTGATGTATGTCATTAACAATGCTCACAGGATCGGCGTCACCGCCATCGCCACCACCAGTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR GCA 72 bp ACGGTGATCCGCAGCAGCTCCCTGTTGGATGATGTGTaGCACACCCTGATATCCTTCTTGGCACAGGTTGCA +
Preference number: 3 (lower is better)
Translates to: TVIRSSSLLDDV*HTLISFLAQVA
Trigger: TGCAACCTGTGCCAAGAAGGATATCAGGGTGTGGCACACATCATCCAACAGGGAGCTGCTGCGGATCACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR TCA 72 bp GCAGCAGCTCCCTGTTGGATGATGTGTGCCACACCCTaGTATCCTTCTTGGCACAGGTTGCAAATAGCTCAG +
Preference number: 3 (lower is better)
Translates to: AAAPCWMMCATP*YPSWHRLQIAQ
Trigger: CTGAGCTATTTGCAACCTGTGCCAAGAAGGATATCAGGGTGTGGCACACATCATCCAACAGGGAGCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR-3UTR CAA 90 bp GACGCCGATCCTGTGAGCATTGTTAATGACATACATCAGTCGGCCTGTCTCTGGCCTTCTTGGCACAGGTaGCAAATAGCTCAGCAGTGC +
Preference number: 3 (lower is better)
Translates to: DADPVSIVNDIHQSACLWPSWHR*QIAQQC
Trigger: GCACTGCTGAGCTATTTGCAACCTGTGCCAAGAAGG...CCAGAGACAGGCCGACTGATGTATGTCATTAACAATGCTCACAGGATCGGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CCA 72 bp AGCATTGTTAATGACATACATCAGTCGGCCTGTCTCTaGGGCGAAGGCTCGGATTTTACCGTCGTTCCATGC +
Preference number: 3 (lower is better)
Translates to: SIVNDIHQSACL*GEGSDFTVVPC
Trigger: GCATGGAACGACGGTAAAATCCGAGCCTTCGCCCCAGAGACAGGCCGACTGATGTATGTCATTAACAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CCA 72 bp TTCCCATACTCGAATTGTCCCACATGTTGGCCAGGATaGTCTCCATCTCTTGACCTCGTGATCCATCCGCTT +
Preference number: 3 (lower is better)
Translates to: FPYSNCPTCWPG*SPSLDLVIHPL
Trigger: AAGCGGATGGATCACGAGGTCAAGAGATGGAGACCATCCTGGCCAACATGTGGGACAATTCGAGTATGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575247.5
3UTR CCA 72 bp AGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATaGGTACTTCCATCGCAAAATGGCTCCATCGGCACT +
Preference number: 3 (lower is better)
Translates to: RLRDISSASGGI*VLPSQNGSIGT
Trigger: AGTGCCGATGGAGCCATTTTGCGATGGAAGTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
3UTR TCA 72 bp CAATATATTGATTTCCTGGACTTATGCGGATGCGTGTaGTGTTGCCACTGTGTCCCACCCCAACGTGAGTCA +
Preference number: 3 (lower is better)
Translates to: QYIDFLDLCGCV*CCHCVPPQRES
Trigger: TGACTCACGTTGGGGTGGGACACAGTGGCAACATCACACGCATCCGCATAAGTCCAGGAAATCAATATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR GCA 72 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTaGGTGCAACGCCAAGGCTCAGAGACATCTCATCAG +
Preference number: 3 (lower is better)
Translates to: VLELSKLSLQQD*VQRQGSETSHQ
Trigger: CTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
3UTR GCA 72 bp TGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTaGAACGCCAAGGCTCAGAGACATCTCATCAGCTTC +
Preference number: 3 (lower is better)
Translates to: WSYLNSVFNRTA*NAKAQRHLISF
Trigger: GAAGCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
3UTR-3UTR CAA 90 bp AATCTTTCTGTCTGTTCCGCTGGTGATGATCTGGAACTCCTCAGGGTGATAGCAACCCTGATATCCTTCTaGGCACAGGTTGCAAATAGC +
Preference number: 3 (lower is better)
Translates to: NLSVCSAGDDLELLRVIATLISF*AQVANS
Trigger: GCTATTTGCAACCTGTGCCAAGAAGGATATCAGGGT...TGCTATCACCCTGAGGAGTTCCAGATCATCACCAGCGGAACAGACAGAAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR TCA 72 bp GACCTGGAGATGGCCAAGCAGGAGACGTTGTTGCCATaGCCCTGTAGGAAGTTCTGCTCTTTAGTATTTATT +
Preference number: 3 (lower is better)
Translates to: DLEMAKQETLLP*PCRKFCSLVFI
Trigger: AATAAATACTAAAGAGCAGAACTTCCTACAGGGTCATGGCAACAACGTCTCCTGCTTGGCCATCTCCAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR TCA 72 bp TTTGGAGAAAAGGCCAGAGCTTCAATTTTGCCTTTGTaGAGGGACAGCCGAGCAAGCAGCTCTCTGTTCTTA +
Preference number: 3 (lower is better)
Translates to: FGEKARASILPL*RDSRASSSLFL
Trigger: TAAGAACAGAGAGCTGCTTGCTCGGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGGCCTTTTCTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR TCA 72 bp CACACACACTGGAATAAGGTGTTGGCTAGTATCATCTaGTTCCTCCTGAGACGCACAAGGTCCCAAATGATA +
Preference number: 3 (lower is better)
Translates to: HTHWNKVLASII*FLLRRTRSQMI
Trigger: TATCATTTGGGACCTTGTGCGTCTCAGGAGGAATCAGATGATACTAGCCAACACCTTATTCCAGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR-3UTR CAA 90 bp TCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGAATTGTCTGGTCAGGATGGCATTaGAGACCAGTGGGCACATGT +
Preference number: 3 (lower is better)
Translates to: SVGQIFLFGRSNSHTRIVWSGWH*RPVGTC
Trigger: ACATGTGCCCACTGGTCTCAAATGCCATCCTGACCA...GACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR TCA 72 bp CCAAATGGAAAGACAATATCCTCGACAGCATCAAAGTaGCAAGTCGCTATGAGCGTCTCTTTGAAATCCGTG +
Preference number: 3 (lower is better)
Translates to: PNGKTISSTASK*QVAMSVSLKSV
Trigger: CACGGATTTCAAAGAGACGCTCATAGCGACTTGTCACTTTGATGCTGTCGAGGATATTGTCTTTCCATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CCA 72 bp TCCATCGGCACTTACACTAACAATATATTGATTTCCTaGACTTATGCGGATGCGTGTGATGTTGCCACTGTG +
Preference number: 3 (lower is better)
Translates to: SIGTYTNNILIS*TYADACDVATV
Trigger: CACAGTGGCAACATCACACGCATCCGCATAAGTCCAGGAAATCAATATATTGTTAGTGTAAGTGCCGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
3UTR-3UTR CAA 90 bp TCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGAATTGTCCTGGAGAAGATCACATaGGTGGCATTGCCAACATTG +
Preference number: 3 (lower is better)
Translates to: SVGQIFLFGRSNSHTRIVLEKIT*VALPTL
Trigger: CAATGTTGGCAATGCCACCAATGTGATCTTCTCCAG...GACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
3UTR CCA 72 bp GACTATTCTTTTCAACTGTCCTGTTTGGCACTCAGTTaGCCAGATTTTTCTATTTGGAAGATCCAATTCCCA +
Preference number: 3 (lower is better)
Translates to: DYSFQLSCLALS*PDFSIWKIQFP
Trigger: TGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAATAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR TCA 90 bp CGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCATGGCATTGCCAACATTaGGGCCGGCTGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RLQGCHRWHLSWLCSTPPWHCQH*GRLQGC
Trigger: GCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCA...TGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR TCA 90 bp GGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCTGGGCCTCCTGGTGGCGATGGCGGTaGCGCCGATCCTGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: GISLGYAPHHHTSVIWASWWRWR*RRSCEH
Trigger: ATGCTCACAGGATCGGCGTCACCGCCATCGCCACCA...GGAGGCCCAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR GCA 90 bp ACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCAGGCCGGCTGCAGGGCTaGCACAGATGGCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: TLVALPTLRPAAGLPQMAGRLQG*HRWHLS
Trigger: AGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCC...TGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR GCA 90 bp GGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACAACATTGAGGCCGGCTaGAGGGCTGCCACAGATGGC +
Preference number: 4 (lower is better)
Translates to: GCRAATDGISLGYAPHHHNIEAG*RAATDG
Trigger: GCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTT...GTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
3UTR CAA 72 bp CCGTCCCTCATGAAGTCGATGCCGTGGCAGGTCATGTaGGGCACGGTGATCCGCAGCAGCTCCCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: PSLMKSMPWQVM*GTVIRSSSLLD
Trigger: ATCCAACAGGGAGCTGCTGCGGATCACCGTGCCCAACATGACCTGCCACGGCATCGACTTCATGAGGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp GTCCCTCATGAAGTCGATGCCGTGGCAGGTCATGTTGGGCACGGTGATCCGCAGTCCAGCTCCGCCACTTaGGCCTCCGGCGAAATTTTG +
Preference number: 4 (lower is better)
Translates to: VPHEVDAVAGHVGHGDPQSSSAT*ASGEIL
Trigger: CAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGA...CTGCGGATCACCGTGCCCAACATGACCTGCCACGGCATCGACTTCATGAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp AGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCCAGGGCTGCCACAGATaGCATCTCTCTTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: RPAAGLPQMASLLAMLHTQGCHR*HLSWLC
Trigger: GCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTG...GGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
3UTR CAA 72 bp AGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTaGGCTATGCTCCACACCACCACACTTCCGTCATCT +
Preference number: 4 (lower is better)
Translates to: RPAAGLPQMASL*AMLHTTTLPSS
Trigger: AGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
3UTR CAA 72 bp TCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATaGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SSRHLEKITLVA*PTLRPAAGLPQ
Trigger: CTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR GCA 90 bp CCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTAACATTGAGGCCGGCTaGAGGGCTGCCACAGATGGC +
Preference number: 4 (lower is better)
Translates to: PGEDHIGGIANIEAGCRANIEAG*RAATDG
Trigger: GCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTT...AGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp CCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCTCCAGCTCCGCCACTTaGGCCTCCGGCGAAATTTTG +
Preference number: 4 (lower is better)
Translates to: PAPGEDHIGGIANIEAGCSSSAT*ASGEIL
Trigger: CAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGA...GCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR TCA 90 bp ATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTTTTGCCGTCCCTCATaGAGTCGATGCCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: IPAPGEDHIGGIANIEAGFCRPS*SRCRGR
Trigger: CCTGCCACGGCATCGACTTCATGAGGGACGGCAAAA...GCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR GCA 90 bp GCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCAACATTGAGGCCGGCTaGAGGGCTGCCACAGATGGC +
Preference number: 4 (lower is better)
Translates to: ATDGISLGYAPHHHTSVINIEAG*RAATDG
Trigger: GCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTT...GATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp ATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCCTCCAGACCTGGAGATaGCCAAGCAGGAGACGTTGT +
Preference number: 4 (lower is better)
Translates to: IANIEAGCRAATDGISLGLQTWR*PSRRRC
Trigger: ACAACGTCTCCTGCTTGGCCATCTCCAGGTCTGGAG...GCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp AGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCAGATGGCATCTCTCTTaGCTATGCTCCACACCACCA +
Preference number: 4 (lower is better)
Translates to: RPAAGLPQMASLLAMLHTRWHLS*LCSTPP
Trigger: TGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCT...GGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp GGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGCAGGGCTGCCACAGATaGCATCTCTCTTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: GLPQMASLLAMLHTTTLPQGCHR*HLSWLC
Trigger: GCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTG...CGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp GATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATCAGTCGGCCTGTCTCTaGGGCGAAGGCTCGGATTTT +
Preference number: 4 (lower is better)
Translates to: DHIGGIANIEAGCRAATDQSACL*GEGSDF
Trigger: AAAATCCGAGCCTTCGCCCCAGAGACAGGCCGACTG...ATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp CGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCAATCCTTGGGAGGTTCTaGTTACTTTGCTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RLQGCHRWHLSWLCSTPPILGRF*LLCSPP
Trigger: GGGAGGAGAGCAAAGTAATCAGAACCTCCCAAGGAT...TGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575247.5
CDS-3UTR TCA 90 bp GATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGTCAGGATGGCATTTaGGACCAGTGGGCACATGTC +
Preference number: 4 (lower is better)
Translates to: DHIGGIANIEAGCRAATDGQDGI*DQWAHV
Trigger: GACATGTGCCCACTGGTCTCAAATGCCATCCTGACC...ATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576499.1
ENST00000576630.5
CDS-3UTR TCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCATGGTGGCGATGGCGGTaGCGCCGATCCTGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSWWRWR*RRSCEH
Trigger: ATGCTCACAGGATCGGCGTCACCGCCATCGCCACCA...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp TGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTCAGGGCTGCCACAGATaGCATCTCTCTTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: CRAATDGISLGYAPHHHTQGCHR*HLSWLC
Trigger: GCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTG...AGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp AGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCCAGGGCTGCCACAGATaGCATCTCTCTTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: RAATDGISLGYAPHHHTSQGCHR*HLSWLC
Trigger: GCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTG...GGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR TCA 90 bp GGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCTGGGCCTCCTCAATTTTGCCTTTGTaGAGGGACAGCCGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GISLGYAPHHHTSVIWASSILPL*RDSRAS
Trigger: GCTTGCTCGGCTGTCCCTTCACAAAGGCAAAATTGA...GGAGGCCCAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR TCA 90 bp GCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGTCAATTTTGCCTTTGTaGAGGGACAGCCGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: ALPTLRPAAGLPQMASLLSILPL*RDSRAS
Trigger: GCTTGCTCGGCTGTCCCTTCACAAAGGCAAAATTGA...CAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR TCA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTTGGCATTGCCAACATTaGGGCCGGCTGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSWHCQH*GRLQGC
Trigger: GCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCA...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCATCATGTTGGGCACGGTaGTCCGCAGCAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSSCWAR*SAAAPC
Trigger: ACAGGGAGCTGCTGCGGATCACCGTGCCCAACATGA...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCACATCGGTGCTGGCGGTaGCACACTCCTCGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSHRCWR*HTPRCS
Trigger: GGAACAACGAGGAGTGTGTCACCGCCAGCACCGATG...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR GCA 90 bp GCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGAGCAGGAGACGTTGTTaGCATGACCCTGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ALPTLRPAAGLPQMASLLSRRRC*HDPVGS
Trigger: ACTTCCTACAGGGTCATGGCAACAACGTCTCCTGCT...CAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576499.1
ENST00000576630.5
CDS-3UTR GCA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCAACATTGAGGCCGGCTaGAGGGCTGCCACAGATGGC +
Preference number: 4 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLNIEAG*RAATDG
Trigger: GCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTT...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR GCA 90 bp AACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTTTCAACAGGACTGCGTaGAACGCCAAGGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NIEAGCRAATDGISLGYAFNRTA*NAKAQR
Trigger: TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAA...AGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp CACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCTGTCCAGCTCCGCCACTTaGGCCTCCGGCGAAATTTTG +
Preference number: 4 (lower is better)
Translates to: HRWHLSWLCSTPPHFRHLSSSAT*ASGEIL
Trigger: CAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGA...CAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp ACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCAAGATGGCATCTCTCTTaGCTATGCTCCACACCACCA +
Preference number: 4 (lower is better)
Translates to: TLVALPTLRPAAGLPQMARWHLS*LCSTPP
Trigger: TGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCT...TGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp CTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGTCTCATCCCGGCACCTaGAGAAGATCACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: LEKITLVALPTLRPAAGLSHPGT*RRSHWW
Trigger: CCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGA...CAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp CCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTTCTCATCCCGGCACCTaGAGAAGATCACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGEDHIGGIANIEAGCRASHPGT*RRSHWW
Trigger: CCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGA...AGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp AGCCAGGGCTTTTACAGAAGACCAGCAGTCCGGCTCCAGAGCCCACCAACAAACTCTCATCCCGGCACCTaGAGAAGATCACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: SQGFYRRPAVRLQSPPTNSHPGT*RRSHWW
Trigger: CCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGA...GTTTGTTGGTGGGCTCTGGAGCCGGACTGCTGGTCTTCTGTAAAAGCCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CAA 72 bp GTCATGTTGGGCACGGTGATCCGCAGCAGCTCCCTGTaGGATGATGTGTGCCACACCCTGATATCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VMLGTVIRSSSL*DDVCHTLISFL
Trigger: CAAGAAGGATATCAGGGTGTGGCACACATCATCCAACAGGGAGCTGCTGCGGATCACCGTGCCCAACATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CAA 72 bp CAAGTCCCATCGGTGCTGGCGGTGACACACTCCTCGTaGTTCCTCTTCACCCTAATGCAGGACACTGATGAC +
Preference number: 4 (lower is better)
Translates to: QVPSVLAVTHSS*FLFTLMQDTDD
Trigger: GTCATCAGTGTCCTGCATTAGGGTGAAGAGGAACAACGAGGAGTGTGTCACCGCCAGCACCGATGGGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTGGGCACATGTCCATTaGAGCCGATCACGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: SVFNRTACNAKAQRHLISWAHVH*SRSRRQ
Trigger: TTGACGCCGTGATCGGCTTCAATGGACATGTGCCCA...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352665.10
CDS-3UTR TCA 90 bp CTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGAGACGTTGTTGCCATaGCCCTGTAGGAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LIPAPGEDHIGGIANIEAETLLP*PCRKFC
Trigger: GCAGAACTTCCTACAGGGTCATGGCAACAACGTCTC...GGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576499.1
ENST00000576630.5
CDS-3UTR TCA 90 bp ATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTCAATTTTGCCTTTGTaGAGGGACAGCCGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: IPAPGEDHIGGIANIEAGSILPL*RDSRAS
Trigger: GCTTGCTCGGCTGTCCCTTCACAAAGGCAAAATTGA...GCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR TCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCATGGCATTGCCAACATTaGGGCCGGCTGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSWHCQH*GRLQGC
Trigger: GCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCA...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp ATAAACATCTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATGGCATTGCCAACATTaGGGCCGGCTGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: INISSRHLEKITLVALPTWHCQH*GRLQGC
Trigger: GCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCA...TGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR TCA 90 bp AAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCATCGGTGCTGGCGGTaGCACACTCCTCGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KLSLQQDCVQRQGSETSHHRCWR*HTPRCS
Trigger: GGAACAACGAGGAGTGTGTCACCGCCAGCACCGATG...ATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp AGACGCACAAGGTCCCAAATGATACAAGTCCCATCGGTGCTGGCGGTGACACACTTATGCGGATGCGTGTaGTGTTGCCACTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RRTRSQMIQVPSVLAVTHLCGCV*CCHCVP
Trigger: TGGGACACAGTGGCAACATCACACGCATCCGCATAA...GTGTGTCACCGCCAGCACCGATGGGACTTGTATCATTTGGGACCTTGTGCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp TGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTAATGATGTCTGCCATTaGAGCCGATCACGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: CRAATDGISLGYAPHHHTNDVCH*SRSRRQ
Trigger: TTGACGCCGTGATCGGCTTCAATGGCAGACATCATT...AGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000575247.5
CDS-3UTR GCA 90 bp ATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACCAGAGCTTCAATTTTaGCTTTGTGAAGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: IEAGCRAATDGISLGYAPPELQF*LCEGTA
Trigger: GGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGG...TGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR GCA 90 bp AACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCATCTCTCTTGGCTATaGTCCACACCACCACACTTC +
Preference number: 4 (lower is better)
Translates to: NIEAGCRAATDGISLGYAHLSWL*STPPHF
Trigger: GAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATG...AGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR GCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGGCCGGCTGCAGGGCTaGCACAGATGGCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSGRLQG*HRWHLS
Trigger: AGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCC...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR GCA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGAACATTGAGGCCGGCTaGAGGGCTGCCACAGATGGC +
Preference number: 4 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSENIEAG*RAATDG
Trigger: GCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTT...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp GCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCTCTCATCCCGGCACCTaGAGAAGATCACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: ATDGISLGYAPHHHTSVISHPGT*RRSHWW
Trigger: CCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGA...GATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCATGAAGTCGATGCCGTaGCAGGTCATGTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: SVFNRTACNAKAQRHLISMKSMP*QVMLGT
Trigger: CGTGCCCAACATGACCTGCCACGGCATCGACTTCAT...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCACAGTCGGCCTGTCTCTaGGGCGAAGGCTCGGATTTT +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSQSACL*GEGSDF
Trigger: AAAATCCGAGCCTTCGCCCCAGAGACAGGCCGACTG...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp AGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCGCTTCAGGAGGTATATaGGTACTTCCATCGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RPAAGLPQMASLLAMLHTASGGI*VLPSQN
Trigger: ATTTTGCGATGGAAGTACCCATATACCTCCTGAAGC...GGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp GGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCTGGGCCTCCAATTGTCCCACATGTTaGCCAGGATGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: GISLGYAPHHHTSVIWASNCPTC*PGWSPS
Trigger: AGATGGAGACCATCCTGGCCAACATGTGGGACAATT...GGAGGCCCAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575247.5
3UTR CAA 72 bp ATAAACATCTCATCCCGGCACCTGGAGAAGATCACATaGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: INISSRHLEKIT*VALPTLRPAAG
Trigger: CCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR TCA 90 bp GTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTATTTATTGCCTGAATaGGGACTGTGCAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: VALPTLRPAAGLPQMASLYLLPE*GLCNQE
Trigger: CTCTTGGTTGCACAGTCCTCATTCAGGCAATAAATA...GAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576499.1
ENST00000576630.5
CDS-3UTR TCA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCCAGCTCCCTGTTGGATaGTGTGTGCCACACCCTGAT +
Preference number: 4 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLQLPVG*CVPHPD
Trigger: ATCAGGGTGTGGCACACATCATCCAACAGGGAGCTG...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCATCATGTTGGGCACGGTaGTCCGCAGCAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSSCWAR*SAAAPC
Trigger: ACAGGGAGCTGCTGCGGATCACCGTGCCCAACATGA...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTTTTGCCGTCCCTCATaGAGTCGATGCCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGFCRPS*SRCRGR
Trigger: CCTGCCACGGCATCGACTTCATGAGGGACGGCAAAA...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAATGGTGGCGATGGCGGTaGCGCCGATCCTGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQWWRWR*RRSCEH
Trigger: ATGCTCACAGGATCGGCGTCACCGCCATCGCCACCA...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCTCCAGCTTCTGGGTCTaGCAGCCTATCTGCCATACC +
Preference number: 4 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLSSFWV*QPICHT
Trigger: GGTATGGCAGATAGGCTGTCAGACCCAGAAGCTGGA...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCGGTGCTGGCGGTaGCACACTCCTCGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRHRCWR*HTPRCS
Trigger: GGAACAACGAGGAGTGTGTCACCGCCAGCACCGATG...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR GCA 90 bp CATACATCAGTCGGCCTGTCTCTGGGGCGAAGGCTCGGATTTTACCGTCGTTCCCCAGAGCTTCAATTTTaGCTTTGTGAAGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: HTSVGLSLGRRLGFYRRSPELQF*LCEGTA
Trigger: GGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGG...GGAACGACGGTAAAATCCGAGCCTTCGCCCCAGAGACAGGCCGACTGATGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR GCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCCGGCTGCAGGGCTaGCACAGATGGCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQGRLQG*HRWHLS
Trigger: AGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCC...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR GCA 90 bp ATAAACATCTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACAAACATTGAGGCCGGCTaGAGGGCTGCCACAGATGGC +
Preference number: 4 (lower is better)
Translates to: INISSRHLEKITLVALPTNIEAG*RAATDG
Trigger: GCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTT...TGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR GCA 90 bp CTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCCCACCTGTGACAAAGTaGACCCCTTCCTGTGTGATA +
Preference number: 4 (lower is better)
Translates to: LIPAPGEDHIGGIANIEAPPVTK*TPSCVI
Trigger: TATCACACAGGAAGGGGTGCACTTTGTCACAGGTGG...GGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR GCA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCAGTCTTCAACAGGACTaGGTGCAACGCCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SVFNRTACNAKAQRHLISSLQQD*VQRQGS
Trigger: TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACT...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGTCCAGCTCCGCCACTTaGGCCTCCGGCGAAATTTTG +
Preference number: 4 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSESSSAT*ASGEIL
Trigger: CAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGA...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTTCCAGCTCCGCCACTTaGGCCTCCGGCGAAATTTTG +
Preference number: 4 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSSSSAT*ASGEIL
Trigger: CAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGA...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp ATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCATTCAACTGTCCTGTTTaGCACTCAGTTGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: IEAGCRAATDGISLGYAPFNCPV*HSVGQI
Trigger: AATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAA...TGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR CCA 90 bp AGCCAGGGCTTTTACAGAAGACCAGCAGTCCGGCTCCAGAGCCCACCAACAAACGTTCCTACGAGAAACTaGTGTCCTTCTCCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: SQGFYRRPAVRLQSPPTNVPTRN*CPSPRS
Trigger: ACTTCGAGGAGAAGGACACCAGTTTCTCGTAGGAAC...GTTTGTTGGTGGGCTCTGGAGCCGGACTGCTGGTCTTCTGTAAAAGCCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCGCAGCAGCTCCCTGTTaGATGATGTGTGCCACACCC +
Preference number: 4 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGAAAPC*MMCATP
Trigger: GGGTGTGGCACACATCATCCAACAGGGAGCTGCTGC...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTCAATTTTGCCTTTGTaGAGGGACAGCCGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SVFNRTACNAKAQRHLISSILPL*RDSRAS
Trigger: GCTTGCTCGGCTGTCCCTTCACAAAGGCAAAATTGA...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCCTGACACTCCCAAACTaGATTTGTCCTTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLLTLPN*ICPSQA
Trigger: GGCCTGCGAAGGACAAATTCAGTTTGGGAGTGTCAG...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTCGACAGCATCAAAGTaGCAAGTCGCTATGAGCGTC +
Preference number: 4 (lower is better)
Translates to: SVFNRTACNAKAQRHLISSTASK*QVAMSV
Trigger: GACGCTCATAGCGACTTGTCACTTTGATGCTGTCGA...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAATGTGTGCCACACCCTaGTATCCTTCTTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSMCATP*YPSWHR
Trigger: CCTGTGCCAAGAAGGATATCAGGGTGTGGCACACAT...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp ATTTCCAGCAGTCATAAACATCTCATCCCGGCACCTGGAGAAGATCACATTGGTTCATGTTGGGCACGGTaGTCCGCAGCAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ISSSHKHLIPAPGEDHIGSCWAR*SAAAPC
Trigger: ACAGGGAGCTGCTGCGGATCACCGTGCCCAACATGA...ACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTATGACTGCTGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCGCACCCCTTCCTGTGTaGTATCCATGCCATTTATCG +
Preference number: 4 (lower is better)
Translates to: SVFNRTACNAKAQRHLISAPLPV*YPCHLS
Trigger: CGATAAATGGCATGGATATCACACAGGAAGGGGTGC...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCGGTCATTTCCACCTGTaGCAAAGTGCACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLGHFHL*QSAPLP
Trigger: AGGAAGGGGTGCACTTTGTCACAGGTGGAAATGACC...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCTGTCCCACCCCAACGTaGGTCACTTCACCCTCATTA +
Preference number: 4 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLCPTPT*VTSPSL
Trigger: TAATGAGGGTGAAGTGACTCACGTTGGGGTGGGACA...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCATTATGCGGATGCGTGTaGTGTTGCCACTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSLCGCV*CCHCVP
Trigger: TGGGACACAGTGGCAACATCACACGCATCCGCATAA...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp CCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGGCAATTTATGAGTTCTaGAAACTCCGAACGCAGACA +
Preference number: 4 (lower is better)
Translates to: PTLRPAAGLPQMASLLAMAIYEF*KLRTQT
Trigger: TGTCTGCGTTCGGAGTTTTCAGAACTCATAAATTGC...CATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576499.1
CDS-3UTR TCA 90 bp ATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATAATCCCACAAAATaGTGTCTGCCATTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: IANIEAGCRAATDGISLGYNPTK*CLPLKP
Trigger: CGGCTTCAATGGCAGACATCATTTTGTGGGATTATA...GCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000575247.5
CDS-3UTR GCA 90 bp ATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCTGGGCCTCCAGAGCTTCAATTTTaGCTTTGTGAAGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: MASLLAMLHTTTLPSSGPPELQF*LCEGTA
Trigger: GGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGG...AGGCCCAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR GCA 90 bp AATCATTTGGAGAAAAGGCCAGAGCTTCAATTTTGCCTTTGTGAAGGGACAGCCGGCCGGCTGCAGGGCTaGCACAGATGGCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: NHLEKRPELQFCLCEGTAGRLQG*HRWHLS
Trigger: AGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCC...GGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGGCCTTTTCTCCAAATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR GCA 90 bp CGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATCCACTCCAATACTCATGACGGCCGGCTGCAGGGCTaGCACAGATGGCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: RGAKVEKAIIIIHSNTHDGRLQG*HRWHLS
Trigger: AGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCC...GTCATGAGTATTGGAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR GCA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCTCCTCCCTAGTGGCTaGAGCGTCTTCTGGTCGTTA +
Preference number: 4 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSLLPSG*SVFWSL
Trigger: TAACGACCAGAAGACGCTGCAGCCACTAGGGAGGAG...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396219.7
CDS-3UTR CCA 90 bp CATCTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGTGTACTCTCCAGACCTaGAGATGGCCAAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HLIPAPGEDHIGGIANIECTLQT*RWPSRR
Trigger: TCTCCTGCTTGGCCATCTCCAGGTCTGGAGAGTACA...CTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp CCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCTAGATGGCATCTCTCTTaGCTATGCTCCACACCACCA +
Preference number: 4 (lower is better)
Translates to: PQMASLLAMLHTTTLPSSRWHLS*LCSTPP
Trigger: TGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCT...AGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGCAGGGCTGCCACAGATaGCATCTCTCTTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSEQGCHR*HLSWLC
Trigger: GCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTG...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp AACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTGAATATCTCCAGTCGTaGTGCCAAGGTAGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: NIEAGCRAATDGISLGYAEYLQS*CQGRKS
Trigger: GCTTTTTCTACCTTGGCACCACGACTGGAGATATTC...AGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CCA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGAGCAGCAGCTCCCTGTTaGATGATGTGTGCCACACCC +
Preference number: 4 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRAAAPC*MMCATP
Trigger: GGGTGTGGCACACATCATCCAACAGGGAGCTGCTGC...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp AACGCCAAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATGGGTACTTCCATGAAGTCGATGCCGTaGCAGGTCATGTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: NAKAQRHLISFRRYMGTSMKSMP*QVMLGT
Trigger: CGTGCCCAACATGACCTGCCACGGCATCGACTTCAT...GGAAGTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCTTGGCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAATCCTTGGGAGGTTCTaGTTACTTTGCTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSILGRF*LLCSPP
Trigger: GGGAGGAGAGCAAAGTAATCAGAACCTCCCAAGGAT...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000396219.7
CDS-3UTR TCA 90 bp TGGAGAAAAGGCCAGAGCTTCAATTTTGCCTTTGTGAAGGGACAGCCGAGCAAGATGTGTGCCACACCCTaGTATCCTTCTTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: WRKGQSFNFAFVKGQPSKMCATP*YPSWHR
Trigger: CCTGTGCCAAGAAGGATATCAGGGTGTGGCACACAT...CTTGCTCGGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGGCCTTTTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCACAGCTCCCTGTTGGATaGTGTGTGCCACACCCTGAT +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSQLPVG*CVPHPD
Trigger: ATCAGGGTGTGGCACACATCATCCAACAGGGAGCTG...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCGTGACGCCGATCCTGTaGGCATTGTTAATGACATAC +
Preference number: 4 (lower is better)
Translates to: SVFNRTACNAKAQRHLISVTPIL*ALLMTY
Trigger: GTATGTCATTAACAATGCTCACAGGATCGGCGTCAC...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGGCACAAGGTCCCAAATaGTACAAGTCCCATCGGTGC +
Preference number: 4 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSEAQGPK*YKSHRC
Trigger: GCACCGATGGGACTTGTATCATTTGGGACCTTGTGC...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTTGGCTAGTATCATCTaGTTCCTCCTGAGACGCACA +
Preference number: 4 (lower is better)
Translates to: SVFNRTACNAKAQRHLISLASII*FLLRRT
Trigger: TGTGCGTCTCAGGAGGAATCAGATGATACTAGCCAA...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp TTGATTTCCTGGACTTATGCGGATGCGTGTGATGTTGCCACTGTGTCCCACCCCTTGGCTAGTATCATCTaGTTCCTCCTGAGACGCACA +
Preference number: 4 (lower is better)
Translates to: LISWTYADACDVATVSHPLASII*FLLRRT
Trigger: TGTGCGTCTCAGGAGGAATCAGATGATACTAGCCAA...GGGGTGGGACACAGTGGCAACATCACACGCATCCGCATAAGTCCAGGAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTTGTCCCACCCCAACGTaGGTCACTTCACCCTCATTA +
Preference number: 4 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSCPTPT*VTSPSL
Trigger: TAATGAGGGTGAAGTGACTCACGTTGGGGTGGGACA...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp CGCACAAGGTCCCAAATGATACAAGTCCCATCGGTGCTGGCGGTGACACACTCCCAGAGCTGTGAGAAATaGAGACTAGTGTTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: RTRSQMIQVPSVLAVTHSQSCEK*RLVLEL
Trigger: TAACTCCAACACTAGTCTTCATTTCTCACAGCTCTG...GGAGTGTGTCACCGCCAGCACCGATGGGACTTGTATCATTTGGGACCTTGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp ATTGATGGGTTTGTAGCCAGGGCTTTTACAGAAGACCAGCAGTCCGGCTCCAGAGGAATGTACACACATTaGTGGGTTTGTAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IDGFVARAFTEDQQSGSRGMYTH*WVCSQG
Trigger: GCCCTGGCTACAAACCCATCAATGTGTGTACATTCC...TCTGGAGCCGGACTGCTGGTCTTCTGTAAAAGCCCTGGCTACAAACCCATCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574937.5
CDS-3UTR TCA 90 bp CTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGTATAATCCCACAAAATaGTGTCTGCCATTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: LEKITLVALPTLRPAAGLYNPTK*CLPLKP
Trigger: CGGCTTCAATGGCAGACATCATTTTGTGGGATTATA...CAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000575247.5
CDS-3UTR GCA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTTCAACAGGACTGCGTaGAACGCCAAGGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGFNRTA*NAKAQR
Trigger: TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAA...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR GCA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTTTCAACAGGACTGCGTaGAACGCCAAGGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSFNRTA*NAKAQR
Trigger: TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAA...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR GCA 90 bp TGCAACGCCAAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATGGGTACTAGTCTTCAACAGGACTaGGTGCAACGCCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: CNAKAQRHLISFRRYMGTSLQQD*VQRQGS
Trigger: TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACT...AGTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCTTGGCGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp TATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATTGCTCCTGGTCAGGATaGCATTTGAGACCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: YLNSVFNRTACNAKAQRHCSWSG*HLRPVG
Trigger: GCCCACTGGTCTCAAATGCCATCCTGACCAGGAGCA...ATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR CCA 90 bp AAACATCTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTTGCTCCTGGTCAGGATaGCATTTGAGACCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KHLIPAPGEDHIGGIANICSWSG*HLRPVG
Trigger: GCCCACTGGTCTCAAATGCCATCCTGACCAGGAGCA...AATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp AAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATTGTACTCTCCAGACCTaGAGATGGCCAAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KLSLQQDCVQRQGSETSHCTLQT*RWPSRR
Trigger: TCTCCTGCTTGGCCATCTCCAGGTCTGGAGAGTACA...ATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR CCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCACAGGGCTGCCACAGATaGCATCTCTCTTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSQGCHR*HLSWLC
Trigger: GCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTG...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp ATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCTGGGCCTCTCAGCAGTGCCAAATaGAAAGACAATATCCTCGAC +
Preference number: 4 (lower is better)
Translates to: MASLLAMLHTTTLPSSGPLSSAK*KDNILD
Trigger: GTCGAGGATATTGTCTTTCCATTTGGCACTGCTGAG...AGGCCCAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGAATGAAGTCGATGCCGTaGCAGGTCATGTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRMKSMP*QVMLGT
Trigger: CGTGCCCAACATGACCTGCCACGGCATCGACTTCAT...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAACAGTCGGCCTGTCTCTaGGGCGAAGGCTCGGATTTT +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQQSACL*GEGSDF
Trigger: AAAATCCGAGCCTTCGCCCCAGAGACAGGCCGACTG...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCATCCTTGGGAGGTTCTaGTTACTTTGCTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGILGRF*LLCSPP
Trigger: GGGAGGAGAGCAAAGTAATCAGAACCTCCCAAGGAT...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000396219.7
CDS-3UTR TCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGTCAGGATGGCATTTaGGACCAGTGGGCACATGTC +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQGQDGI*DQWAHV
Trigger: GACATGTGCCCACTGGTCTCAAATGCCATCCTGACC...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR TCA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGTCAATTTTGCCTTTGTaGAGGGACAGCCGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSESILPL*RDSRAS
Trigger: GCTTGCTCGGCTGTCCCTTCACAAAGGCAAAATTGA...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp AGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGAATTGTCCCTGGCATTGCCAACATTaGGGCCGGCTGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SWPDFSIWKIQFPYSNCPWHCQH*GRLQGC
Trigger: GCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCA...GGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR TCA 90 bp GAGCCTGGGACCTTTCATGGTGACACCTCTTTCCACAGGCAACTCCCGTACTCCCCACTCCAATACTCATaGCTATTCTTTTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: EPGTFHGDTSFHRQLPYSPLQYS*LFFSTV
Trigger: GACAGTTGAAAAGAATAGTCATGAGTATTGGAGTGG...GGAGTACGGGAGTTGCCTGTGGAAAGAGGTGTCACCATGAAAGGTCCCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCGTAACTGAATCTTCTTaGTGGGTTTGTAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLVTESS*WVCSQG
Trigger: GCCCTGGCTACAAACCCATCAAGAAGATTCAGTTAC...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp GACGCCGATCCTGTGAGCATTGTTAATGACATACATCAGTCGGCCTGTCTCTGGGTAACTGAATCTTCTTaGTGGGTTTGTAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: DADPVSIVNDIHQSACLWVTESS*WVCSQG
Trigger: GCCCTGGCTACAAACCCATCAAGAAGATTCAGTTAC...CCAGAGACAGGCCGACTGATGTATGTCATTAACAATGCTCACAGGATCGGCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAATGTGTGCCACACCCTaGTATCCTTCTTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSMCATP*YPSWHR
Trigger: CCTGTGCCAAGAAGGATATCAGGGTGTGGCACACAT...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp GTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCACAGCTCCCTGTTGGATaGTGTGTGCCACACCCTGAT +
Preference number: 4 (lower is better)
Translates to: VSSLVLGFIFRISPVVVPQLPVG*CVPHPD
Trigger: ATCAGGGTGTGGCACACATCATCCAACAGGGAGCTG...TGGCACCACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCGTTCCATGCTGAAATaGTGCTTTTGCCGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSRSMLK*CFCRPS
Trigger: TGAGGGACGGCAAAAGCATCATTTCAGCATGGAACG...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCCGTTCCATGCTGAAATaGTGCTTTTGCCGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGRSMLK*CFCRPS
Trigger: TGAGGGACGGCAAAAGCATCATTTCAGCATGGAACG...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCTCCAGCTTCTGGGTCTaGCAGCCTATCTGCCATACC +
Preference number: 4 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRSSFWV*QPICHT
Trigger: GGTATGGCAGATAGGCTGTCAGACCCAGAAGCTGGA...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp ACGATAAATGTGCGATTCTTCTGTTCCTACGAGAAACTGGTGTCCTTCTCCTCGTCCAGCTTCTGGGTCTaGCAGCCTATCTGCCATACC +
Preference number: 4 (lower is better)
Translates to: TINVRFFCSYEKLVSFSSSSFWV*QPICHT
Trigger: GGTATGGCAGATAGGCTGTCAGACCCAGAAGCTGGA...CGAGGAGAAGGACACCAGTTTCTCGTAGGAACAGAAGAATCGCACATTTATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCTTGGCTAGTATCATCTaGTTCCTCCTGAGACGCACA +
Preference number: 4 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLLASII*FLLRRT
Trigger: TGTGCGTCTCAGGAGGAATCAGATGATACTAGCCAA...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp GCAGTCATAAACATCTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGGCACCCCTTCCTGTGTaGTATCCATGCCATTTATCG +
Preference number: 4 (lower is better)
Translates to: AVINISSRHLEKITLVALAPLPV*YPCHLS
Trigger: CGATAAATGGCATGGATATCACACAGGAAGGGGTGC...CAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTATGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGGTCATTTCCACCTGTaGCAAAGTGCACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSGHFHL*QSAPLP
Trigger: AGGAAGGGGTGCACTTTGTCACAGGTGGAAATGACC...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp TATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATTGTCCCACCCCAACGTaGGTCACTTCACCCTCATTA +
Preference number: 4 (lower is better)
Translates to: YLNSVFNRTACNAKAQRHCPTPT*VTSPSL
Trigger: TAATGAGGGTGAAGTGACTCACGTTGGGGTGGGACA...ATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp TATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATTTATGCGGATGCGTGTaGTGTTGCCACTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: YLNSVFNRTACNAKAQRHLCGCV*CCHCVP
Trigger: TGGGACACAGTGGCAACATCACACGCATCCGCATAA...ATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR GCA 90 bp ACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCACTCTTTAGTATTTATTaGCTGAATGAGGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: TLVALPTLRPAAGLPQMALFSIY*LNEDCA
Trigger: TGCACAGTCCTCATTCAGGCAATAAATACTAAAGAG...TGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576499.1
ENST00000576630.5
CDS-3UTR GCA 90 bp AAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCATCTCTCTTGGCTATaGTCCACACCACCACACTTC +
Preference number: 4 (lower is better)
Translates to: KLSLQQDCVQRQGSETSHHLSWL*STPPHF
Trigger: GAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATG...ATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR GCA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGCATCTCTCTTGGCTATaGTCCACACCACCACACTTC +
Preference number: 4 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSEHLSWL*STPPHF
Trigger: GAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATG...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR GCA 90 bp GTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGAATTGTCCCAGGCCGGCTGCAGGGCTaGCACAGATGGCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: VGQIFLFGRSNSHTRIVPGRLQG*HRWHLS
Trigger: AGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCC...TGGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR GCA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCCTGTTGGATGATGTGTaGCACACCCTGATATCCTTC +
Preference number: 4 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLLLDDV*HTLISF
Trigger: GAAGGATATCAGGGTGTGGCACACATCATCCAACAG...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR GCA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGAAGTCTTCAACAGGACTaGGTGCAACGCCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRSLQQD*VQRQGS
Trigger: TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACT...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp ACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATTTGTTATCCATCCTTaGGAGGTTCTGATTACTTTG +
Preference number: 4 (lower is better)
Translates to: TLVALPTLRPAAGLPQMAFVIHP*EVLITL
Trigger: CAAAGTAATCAGAACCTCCCAAGGATGGATAACAAA...TGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR CCA 90 bp CGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATCCACTCCAATACTCATGACTCCAGCTCCGCCACTTaGGCCTCCGGCGAAATTTTG +
Preference number: 4 (lower is better)
Translates to: RGAKVEKAIIIIHSNTHDSSSAT*ASGEIL
Trigger: CAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGA...GTCATGAGTATTGGAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR CCA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCTGCTCCTGGTCAGGATaGCATTTGAGACCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRCSWSG*HLRPVG
Trigger: GCCCACTGGTCTCAAATGCCATCCTGACCAGGAGCA...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR CCA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCTCCAGACCTGGAGATaGCCAAGCAGGAGACGTTGT +
Preference number: 4 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRLQTWR*PSRRRC
Trigger: ACAACGTCTCCTGCTTGGCCATCTCCAGGTCTGGAG...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR CCA 90 bp AAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATAGATGGCATCTCTCTTaGCTATGCTCCACACCACCA +
Preference number: 4 (lower is better)
Translates to: KLSLQQDCVQRQGSETSHRWHLS*LCSTPP
Trigger: TGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCT...ATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGAGATGGCATCTCTCTTaGCTATGCTCCACACCACCA +
Preference number: 4 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSERWHLS*LCSTPP
Trigger: TGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCT...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp GAATTTGTCCTTCGCAGGCCCAACATCTGTCAGCAGTTTAGTCCTGGGGTTCATAGATGGCATCTCTCTTaGCTATGCTCCACACCACCA +
Preference number: 4 (lower is better)
Translates to: EFVLRRPNICQQFSPGVHRWHLS*LCSTPP
Trigger: TGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCT...ATGAACCCCAGGACTAAACTGCTGACAGATGTTGGGCCTGCGAAGGACAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCATCTCATCCCGGCACCTaGAGAAGATCACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSSHPGT*RRSHWW
Trigger: CCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGA...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTTCAACTGTCCTGTTTaGCACTCAGTTGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: SVFNRTACNAKAQRHLISFNCPV*HSVGQI
Trigger: AATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAA...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp TCTGTCTGTTCCGCTGGTGATGATCTGGAACTCCTCAGGGTGATAGCACACACAACTTCCATCGCAAAATaGCTCCATCGGCACTTACAC +
Preference number: 4 (lower is better)
Translates to: SVCSAGDDLELLRVIAHTTSIAK*LHRHLH
Trigger: GTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAGT...TGTGTGTGCTATCACCCTGAGGAGTTCCAGATCATCACCAGCGGAACAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
3UTR CAA 72 bp CAAAATGATGTCTGCCTTGAACCCCATGAATGTGACTaGTCCGGAGGCGATGTACTCTCCAGACCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: QNDVCLEPHECD*SGGDVLSRPGD
Trigger: ATCTCCAGGTCTGGAGAGTACATCGCCTCCGGACAAGTCACATTCATGGGGTTCAAGGCAGACATCATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTATTTATTGCCTGAATaGGGACTGTGCAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: SVFNRTACNAKAQRHLISYLLPE*GLCNQE
Trigger: CTCTTGGTTGCACAGTCCTCATTCAGGCAATAAATA...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR TCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGAGACGTTGTTGCCATaGCCCTGTAGGAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQETLLP*PCRKFC
Trigger: GCAGAACTTCCTACAGGGTCATGGCAACAACGTCTC...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR TCA 90 bp GTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCACTGACACTCCCAAACTaGATTTGTCCTTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VSSLVLGFIFRISPVVVPLTLPN*ICPSQA
Trigger: GGCCTGCGAAGGACAAATTCAGTTTGGGAGTGTCAG...TGGCACCACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574937.5
ENST00000576630.5
CDS-3UTR TCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAACTGACACTCCCAAACTaGATTTGTCCTTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQLTLPN*ICPSQA
Trigger: GGCCTGCGAAGGACAAATTCAGTTTGGGAGTGTCAG...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp AAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGGCACCTGATAGCTaGCACTCCCAAACTGAATTT +
Preference number: 4 (lower is better)
Translates to: KLSLQQDCVQRQGSETSHQAPDS*HSQTEF
Trigger: AAATTCAGTTTGGGAGTGTCAGCTATCAGGTGCCTG...ATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTGTAACTGAATCTTCTTaGTGGGTTTGTAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSVTESS*WVCSQG
Trigger: GCCCTGGCTACAAACCCATCAAGAAGATTCAGTTAC...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp TATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATTCGACAGCATCAAAGTaGCAAGTCGCTATGAGCGTC +
Preference number: 4 (lower is better)
Translates to: YLNSVFNRTACNAKAQRHSTASK*QVAMSV
Trigger: GACGCTCATAGCGACTTGTCACTTTGATGCTGTCGA...ATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp AAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATGGGTACTTCCATCGCATCGACAGCATCAAAGTaGCAAGTCGCTATGAGCGTC +
Preference number: 4 (lower is better)
Translates to: KAQRHLISFRRYMGTSIASTASK*QVAMSV
Trigger: GACGCTCATAGCGACTTGTCACTTTGATGCTGTCGA...TGCGATGGAAGTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGAACCGTCGTTCCATGCTaGAATGATGCTTTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRTVVPC*NDAFAV
Trigger: GACGGCAAAAGCATCATTTCAGCATGGAACGACGGT...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCGTGACGCCGATCCTGTaGGCATTGTTAATGACATAC +
Preference number: 4 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGVTPIL*ALLMTY
Trigger: GTATGTCATTAACAATGCTCACAGGATCGGCGTCAC...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp CACCTGATAGCTGACACTCCCAAACTGAATTTGTCCTTCGCAGGCCCAACATCTGTGACGCCGATCCTGTaGGCATTGTTAATGACATAC +
Preference number: 4 (lower is better)
Translates to: HLIADTPKLNLSFAGPTSVTPIL*ALLMTY
Trigger: GTATGTCATTAACAATGCTCACAGGATCGGCGTCAC...AGATGTTGGGCCTGCGAAGGACAAATTCAGTTTGGGAGTGTCAGCTATCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp GTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCATCGGTGCTGGCGGTaGCACACTCCTCGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: VWHSVGQIFLFGRSNSHTHRCWR*HTPRCS
Trigger: GGAACAACGAGGAGTGTGTCACCGCCAGCACCGATG...AGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCGCACAAGGTCCCAAATaGTACAAGTCCCATCGGTGC +
Preference number: 4 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRAQGPK*YKSHRC
Trigger: GCACCGATGGGACTTGTATCATTTGGGACCTTGTGC...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGCACAAGGTCCCAAATaGTACAAGTCCCATCGGTGC +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQAQGPK*YKSHRC
Trigger: GCACCGATGGGACTTGTATCATTTGGGACCTTGTGC...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTTGGCTAGTATCATCTaGTTCCTCCTGAGACGCACA +
Preference number: 4 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGLASII*FLLRRT
Trigger: TGTGCGTCTCAGGAGGAATCAGATGATACTAGCCAA...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGCACCCCTTCCTGTGTaGTATCCATGCCATTTATCG +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSAPLPV*YPCHLS
Trigger: CGATAAATGGCATGGATATCACACAGGAAGGGGTGC...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp AGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCAAGGGGTCATTTCCACCTGTaGCAAAGTGCACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSLVLGFIFRISPVVVPRGHFHL*QSAPLP
Trigger: AGGAAGGGGTGCACTTTGTCACAGGTGGAAATGACC...CCTTGGCACCACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR GCA 90 bp AAACATCTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTCATCTCTCTTGGCTATaGTCCACACCACCACACTTC +
Preference number: 4 (lower is better)
Translates to: KHLIPAPGEDHIGGIANIHLSWL*STPPHF
Trigger: GAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATG...AATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR GCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAATTCAACAGGACTGCGTaGAACGCCAAGGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQFNRTA*NAKAQR
Trigger: TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAA...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp ATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTTTGTTATCCATCCTTaGGAGGTTCTGATTACTTTG +
Preference number: 4 (lower is better)
Translates to: IPAPGEDHIGGIANIEAGFVIHP*EVLITL
Trigger: CAAAGTAATCAGAACCTCCCAAGGATGGATAACAAA...GCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR CCA 90 bp CTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCCAAGTACAAATCATTTaGAGAAAAGGCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LIPAPGEDHIGGIANIEAQVQII*RKGQSF
Trigger: GAAGCTCTGGCCTTTTCTCCAAATGATTTGTACTTG...GGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp GCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCCAAGTACAAATCATTTaGAGAAAAGGCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ATDGISLGYAPHHHTSVIQVQII*RKGQSF
Trigger: GAAGCTCTGGCCTTTTCTCCAAATGATTTGTACTTG...GATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAATCTCATCCCGGCACCTaGAGAAGATCACATTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQSHPGT*RRSHWW
Trigger: CCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGA...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp ATTGATGGGTTTGTAGCCAGGGCTTTTACAGAAGACCAGCAGTCCGGCTCCAGAGAATATCTCCAGTCGTaGTGCCAAGGTAGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: IDGFVARAFTEDQQSGSREYLQS*CQGRKS
Trigger: GCTTTTTCTACCTTGGCACCACGACTGGAGATATTC...TCTGGAGCCGGACTGCTGGTCTTCTGTAAAAGCCCTGGCTACAAACCCATCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574937.5
CDS-3UTR CCA 90 bp CTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCGCAGCAGCTCCCTGTTaGATGATGTGTGCCACACCC +
Preference number: 4 (lower is better)
Translates to: LSCLALSWPDFSIWKIQFAAAPC*MMCATP
Trigger: GGGTGTGGCACACATCATCCAACAGGGAGCTGCTGC...GAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCACTTCCATCGCAAAATaGCTCCATCGGCACTTACAC +
Preference number: 4 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGTSIAK*LHRHLH
Trigger: GTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAGT...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTACTTCCATCGCAAAATaGCTCCATCGGCACTTACAC +
Preference number: 4 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSTSIAK*LHRHLH
Trigger: GTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAGT...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCGCTTCAGGAGGTATATaGGTACTTCCATCGCAAAAT +
Preference number: 4 (lower is better)
Translates to: SVFNRTACNAKAQRHLISASGGI*VLPSQN
Trigger: ATTTTGCGATGGAAGTACCCATATACCTCCTGAAGC...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
3UTR CAA 72 bp CTGTTGGATGATGTGTGCCACACCCTGATATCCTTCTaGGCACAGGTTGCAAATAGCTCAGCAGTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: LLDDVCHTLISF*AQVANSSAVPN
Trigger: ATTTGGCACTGCTGAGCTATTTGCAACCTGTGCCAAGAAGGATATCAGGGTGTGGCACACATCATCCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp GTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCAATCCTTGGGAGGTTCTaGTTACTTTGCTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VSSLVLGFIFRISPVVVPILGRF*LLCSPP
Trigger: GGGAGGAGAGCAAAGTAATCAGAACCTCCCAAGGAT...TGGCACCACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574937.5
CDS-3UTR TCA 90 bp AATATCTCCAGTCGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATCCACTCCGAGACGTTGTTGCCATaGCCCTGTAGGAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: NISSRGAKVEKAIIIIHSETLLP*PCRKFC
Trigger: GCAGAACTTCCTACAGGGTCATGGCAACAACGTCTC...GGAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACGACTGGAGATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACAGGCACCTGATAGCTaGCACTCCCAAACTGAATTT +
Preference number: 4 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRQAPDS*HSQTEF
Trigger: AAATTCAGTTTGGGAGTGTCAGCTATCAGGTGCCTG...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCATGCCGCCTTGTAACTaGATCTTCTTGATGGGTTTG +
Preference number: 4 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGMPPCN*IFLMGL
Trigger: CAAACCCATCAAGAAGATTCAGTTACAAGGCGGCAT...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGATGCCGCCTTGTAACTaGATCTTCTTGATGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSEMPPCN*IFLMGL
Trigger: CAAACCCATCAAGAAGATTCAGTTACAAGGCGGCAT...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCACCGTCGTTCCATGCTaGAATGATGCTTTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRTVVPC*NDAFAV
Trigger: GACGGCAAAAGCATCATTTCAGCATGGAACGACGGT...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp AATATATTGATTTCCTGGACTTATGCGGATGCGTGTGATGTTGCCACTGTGTCCTTATGCGGATGCGTGTaGTGTTGCCACTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: NILISWTYADACDVATVSLCGCV*CCHCVP
Trigger: TGGGACACAGTGGCAACATCACACGCATCCGCATAA...GGACACAGTGGCAACATCACACGCATCCGCATAAGTCCAGGAAATCAATATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp CTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCGGAGAACAGGACCATTaGAGCCGATCACGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: LSCLALSWPDFSIWKIQFGEQDH*SRSRRQ
Trigger: TTGACGCCGTGATCGGCTTCAATGGTCCTGTTCTCC...GAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp TCTGTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGGTGCGAATTGTCCCACATTaGAGCCGATCACGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: SVSSLVLGFIFRISPVVVRIVPH*SRSRRQ
Trigger: TTGACGCCGTGATCGGCTTCAATGTGGGACAATTCG...CACCACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574937.5
CDS-3UTR GCA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCAGCAGGAGACGTTGTTaGCATGACCCTGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRSRRRC*HDPVGS
Trigger: ACTTCCTACAGGGTCATGGCAACAACGTCTCCTGCT...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR GCA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACCAGAGCTTCAATTTTaGCTTTGTGAAGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRPELQF*LCEGTA
Trigger: GGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGG...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR GCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCACCAGAGCTTCAATTTTaGCTTTGTGAAGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSPELQF*LCEGTA
Trigger: GGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGG...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR GCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAACCACCTGTGACAAAGTaGACCCCTTCCTGTGTGATA +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQPPVTK*TPSCVI
Trigger: TATCACACAGGAAGGGGTGCACTTTGTCACAGGTGG...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTTTCAACTGTCCTGTTTaGCACTCAGTTGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSFNCPV*HSVGQI
Trigger: AATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAA...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGAGTTCCTACGAGAAACTaGTGTCCTTCTCCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRVPTRN*CPSPRS
Trigger: ACTTCGAGGAGAAGGACACCAGTTTCTCGTAGGAAC...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGTTCCTACGAGAAACTaGTGTCCTTCTCCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSVPTRN*CPSPRS
Trigger: ACTTCGAGGAGAAGGACACCAGTTTCTCGTAGGAAC...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGCTCAGCAGTGCCAAATaGAAAGACAATATCCTCGAC +
Preference number: 4 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSELSSAK*KDNILD
Trigger: GTCGAGGATATTGTCTTTCCATTTGGCACTGCTGAG...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATaGGTACTTCCATCGCAAAAT +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSASGGI*VLPSQN
Trigger: ATTTTGCGATGGAAGTACCCATATACCTCCTGAAGC...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCATTAGTATTTATTGCCTaGATGAGGACTGTGCAACCA +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSLVFIA*MRTVQP
Trigger: TGGTTGCACAGTCCTCATTCAGGCAATAAATACTAA...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR TCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCACCACTCCAATACTCATaGCTATTCTTTTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSPLQYS*LFFSTV
Trigger: GACAGTTGAAAAGAATAGTCATGAGTATTGGAGTGG...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp AATCATTTGGAGAAAAGGCCAGAGCTTCAATTTTGCCTTTGTGAAGGGACAGCCCGTTCCATGCTGAAATaGTGCTTTTGCCGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: NHLEKRPELQFCLCEGTARSMLK*CFCRPS
Trigger: TGAGGGACGGCAAAAGCATCATTTCAGCATGGAACG...GGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGGCCTTTTCTCCAAATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp AAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGAGCTGTGAGAAATaGAGACTAGTGTTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: KLSLQQDCVQRQGSETSHQSCEK*RLVLEL
Trigger: TAACTCCAACACTAGTCTTCATTTCTCACAGCTCTG...ATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp GTATATGGGTACTTCCATCGCAAAATGGCTCCATCGGCACTTACACTAACAATATGGGACCTTTCATGGTaGCACCTCTTTCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: VYGYFHRKMAPSALTLTIWDLSW*HLFPQA
Trigger: TGCCTGTGGAAAGAGGTGTCACCATGAAAGGTCCCA...TATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAGTACCCATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR GCA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCTGTTGGATGATGTGTaGCACACCCTGATATCCTTC +
Preference number: 4 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRLLDDV*HTLISF
Trigger: GAAGGATATCAGGGTGTGGCACACATCATCCAACAG...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR GCA 90 bp TTTTTAGAATATCTCCAGTCGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATGGGCACATGTCCAGGTaGTCTGAAGAGCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: FLEYLQSWCQGRKSYHHHGHMSR*SEEPGT
Trigger: GGTCCCAGGCTCTTCAGAGCACCTGGACATGTGCCC...ATGATGATGATAGCTTTTTCTACCTTGGCACCACGACTGGAGATATTCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp GGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCAAGGTAGAAAAAGCTATCATTCCAGCTCCGCCACTTaGGCCTCCGGCGAAATTTTG +
Preference number: 4 (lower is better)
Translates to: GSFLEYLQSWCQGRKSYHSSSAT*ASGEIL
Trigger: CAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGA...ATGATAGCTTTTTCTACCTTGGCACCACGACTGGAGATATTCTAAAAATGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR CCA 90 bp AAGATCCAATTCCCATACTCGAATTGTCCCATTTCCAGCAGTCATAAACATCTCCTCCAGACCTGGAGATaGCCAAGCAGGAGACGTTGT +
Preference number: 4 (lower is better)
Translates to: KIQFPYSNCPISSSHKHLLQTWR*PSRRRC
Trigger: ACAACGTCTCCTGCTTGGCCATCTCCAGGTCTGGAG...GAGATGTTTATGACTGCTGGAAATGGGACAATTCGAGTATGGGAATTGGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp AGGTATTTATCCAGGACTAAAGACGTGTTCCCCCAGATCAGAATGACCATGTTTTGTACTCTCCAGACCTaGAGATGGCCAAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RYLSRTKDVFPQIRMTMFCTLQT*RWPSRR
Trigger: TCTCCTGCTTGGCCATCTCCAGGTCTGGAGAGTACA...AAACATGGTCATTCTGATCTGGGGGAACACGTCTTTAGTCCTGGATAAATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576499.1
CDS-3UTR CCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCACAAGTACAAATCATTTaGAGAAAAGGCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSQVQII*RKGQSF
Trigger: GAAGCTCTGGCCTTTTCTCCAAATGATTTGTACTTG...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAATATCTCCAGTCGTaGTGCCAAGGTAGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSEYLQS*CQGRKS
Trigger: GCTTTTTCTACCTTGGCACCACGACTGGAGATATTC...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAACTGGAATAAGGTGTTaGCTAGTATCATCTGATTCC +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSTGIRC*LVSSDS
Trigger: GGAATCAGATGATACTAGCCAACACCTTATTCCAGT...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp TGGAGAAAAGGCCAGAGCTTCAATTTTGCCTTTGTGAAGGGACAGCCGAGCAAGCAAACTTTGACCAGATaGTCATTTCCACCTGTGACA +
Preference number: 4 (lower is better)
Translates to: WRKGQSFNFAFVKGQPSKQTLTR*SFPPVT
Trigger: TGTCACAGGTGGAAATGACCATCTGGTCAAAGTTTG...CTTGCTCGGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGGCCTTTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp ATGACTATTCTTTTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTAGGTCAGGATGGCATTTaGGACCAGTGGGCACATGTC +
Preference number: 4 (lower is better)
Translates to: MTILFNCPVWHSVGQIFLGQDGI*DQWAHV
Trigger: GACATGTGCCCACTGGTCTCAAATGCCATCCTGACC...TAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAATAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGTTAGTATTTATTGCCTaGATGAGGACTGTGCAACCA +
Preference number: 4 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSELVFIA*MRTVQP
Trigger: TGGTTGCACAGTCCTCATTCAGGCAATAAATACTAA...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR TCA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTATAATCCCAAACTTTaGCCAGATGGTCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGYNPKL*PDGHFH
Trigger: GTGGAAATGACCATCTGGTCAAAGTTTGGGATTATA...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp AAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATTATAATCCCAAACTTTaGCCAGATGGTCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: KLSLQQDCVQRQGSETSHYNPKL*PDGHFH
Trigger: GTGGAAATGACCATCTGGTCAAAGTTTGGGATTATA...ATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp AGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGAATTGTCCCTGTCCCACCCCAACGTaGGTCACTTCACCCTCATTA +
Preference number: 4 (lower is better)
Translates to: SWPDFSIWKIQFPYSNCPCPTPT*VTSPSL
Trigger: TAATGAGGGTGAAGTGACTCACGTTGGGGTGGGACA...GGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCACAGAGCTGTGAGAAATaGAGACTAGTGTTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSQSCEK*RLVLEL
Trigger: TAACTCCAACACTAGTCTTCATTTCTCACAGCTCTG...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp TCTCATCAGCTTCAGGAGGTATATGGGTACTTCCATCGCAAAATGGCTCCATCGCAGAGCTGTGAGAAATaGAGACTAGTGTTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: SHQLQEVYGYFHRKMAPSQSCEK*RLVLEL
Trigger: TAACTCCAACACTAGTCTTCATTTCTCACAGCTCTG...CGATGGAGCCATTTTGCGATGGAAGTACCCATATACCTCCTGAAGCTGATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp TTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATGATGTCTGCCATTaGAGCCGATCACGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: FNCPVWHSVGQIFLFGRSNDVCH*SRSRRQ
Trigger: TTGACGCCGTGATCGGCTTCAATGGCAGACATCATT...GGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000575247.5
CDS-3UTR GCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCACTCTTTAGTATTTATTaGCTGAATGAGGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSLFSIY*LNEDCA
Trigger: TGCACAGTCCTCATTCAGGCAATAAATACTAAAGAG...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR GCA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGATATCTCCAGTCGTGGTaGCAAGGTAGAAAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRYLQSW*QGRKSY
Trigger: ATAGCTTTTTCTACCTTGGCACCACGACTGGAGATA...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR GCA 90 bp CTTCCATCGCAAAATGGCTCCATCGGCACTTACACTAACAATATATTGATTTCCAGTCTTCAACAGGACTaGGTGCAACGCCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPSQNGSIGTYTNNILISSLQQD*VQRQGS
Trigger: TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACT...GGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTTGTTTGGCACTCAGTTaGCCAGATTTTTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSCLALS*PDFSIW
Trigger: CCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACA...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp GTGAAGGGACAGCCGAGCAAGCAGCTCTCTGTTCTTATAATCCCACAAAATGATTTCAACTGTCCTGTTTaGCACTCAGTTGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: VKGQPSKQLSVLIIPQNDFNCPV*HSVGQI
Trigger: AATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAA...ATCATTTTGTGGGATTATAAGAACAGAGAGCTGCTTGCTCGGCTGTCCCTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAACTCAGCAGTGCCAAATaGAAAGACAATATCCTCGAC +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQLSSAK*KDNILD
Trigger: GTCGAGGATATTGTCTTTCCATTTGGCACTGCTGAG...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTACTGGAATAAGGTGTTaGCTAGTATCATCTGATTCC +
Preference number: 4 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSTGIRC*LVSSDS
Trigger: GGAATCAGATGATACTAGCCAACACCTTATTCCAGT...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCACAAACTTTGACCAGATaGTCATTTCCACCTGTGACA +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSQTLTR*SFPPVT
Trigger: TGTCACAGGTGGAAATGACCATCTGGTCAAAGTTTG...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCAATATATTGATTTCCTaGACTTATGCGGATGCGTGT +
Preference number: 4 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLNILIS*TYADAC
Trigger: ACACGCATCCGCATAAGTCCAGGAAATCAATATATT...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp GTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATGGGTACAATATATTGATTTCCTaGACTTATGCGGATGCGTGT +
Preference number: 4 (lower is better)
Translates to: VQRQGSETSHQLQEVYGYNILIS*TYADAC
Trigger: ACACGCATCCGCATAAGTCCAGGAAATCAATATATT...GTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCTTGGCGTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAAATATATTGATTTCCTaGACTTATGCGGATGCGTGT +
Preference number: 4 (lower is better)
Translates to: TQSSTGLRATPRLRDISSNILIS*TYADAC
Trigger: ACACGCATCCGCATAAGTCCAGGAAATCAATATATT...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp TATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATGCTTCAGGAGGTATATaGGTACTTCCATCGCAAAAT +
Preference number: 4 (lower is better)
Translates to: YLNSVFNRTACNAKAQRHASGGI*VLPSQN
Trigger: ATTTTGCGATGGAAGTACCCATATACCTCCTGAAGC...ATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp TCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCAACATGTTGGCCAGGATaGTCTCCATCTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: SCLALSWPDFSIWKIQFPTCWPG*SPSLDL
Trigger: GAGGTCAAGAGATGGAGACCATCCTGGCCAACATGT...TGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575247.5
CDS-3UTR TCA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACCACTCCAATACTCATaGCTATTCTTTTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRPLQYS*LFFSTV
Trigger: GACAGTTGAAAAGAATAGTCATGAGTATTGGAGTGG...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR TCA 90 bp AGTCGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATCCACTCCAATACTCATCAGGCACCTGATAGCTaGCACTCCCAAACTGAATTT +
Preference number: 4 (lower is better)
Translates to: SRGAKVEKAIIIIHSNTHQAPDS*HSQTEF
Trigger: AAATTCAGTTTGGGAGTGTCAGCTATCAGGTGCCTG...ATGAGTATTGGAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574937.5
ENST00000576630.5
CDS-3UTR TCA 90 bp CTTCCATCGCAAAATGGCTCCATCGGCACTTACACTAACAATATATTGATTTCCACCGTCGTTCCATGCTaGAATGATGCTTTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: LPSQNGSIGTYTNNILISTVVPC*NDAFAV
Trigger: GACGGCAAAAGCATCATTTCAGCATGGAACGACGGT...GGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp GTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCAATGCCGCCTTGTAACTaGATCTTCCTGGTGATAATT +
Preference number: 4 (lower is better)
Translates to: VSSLVLGFIFRISPVVVPMPPCN*IFLVII
Trigger: AATTATCACCAGGAAGATTCAGTTACAAGGCGGCAT...TGGCACCACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574937.5
CDS-3UTR GCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAATATCTCCAGTCGTGGTaGCAAGGTAGAAAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQYLQSW*QGRKSY
Trigger: ATAGCTTTTTCTACCTTGGCACCACGACTGGAGATA...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR GCA 90 bp GTGAAGGGACAGCCGAGCAAGCAGCTCTCTGTTCTTATAATCCCACAAAATGATCGTACTCCAAATATCTaGCAAGGTAACACTACTGCT +
Preference number: 4 (lower is better)
Translates to: VKGQPSKQLSVLIIPQNDRTPNI*QGNTTA
Trigger: AGCAGTAGTGTTACCTTGGCAGATATTTGGAGTACG...ATCATTTTGTGGGATTATAAGAACAGAGAGCTGCTTGCTCGGCTGTCCCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCACAAGTACAAATCATTTaGAGAAAAGGCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSQVQII*RKGQSF
Trigger: GAAGCTCTGGCCTTTTCTCCAAATGATTTGTACTTG...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp CCCATTTCCAGCAGTCATAAACATCTCATCCCGGCACCTGGAGAAGATCACATTTGTTTGGCACTCAGTTaGCCAGATTTTTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: PISSSHKHLIPAPGEDHICLALS*PDFSIW
Trigger: CCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACA...AATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTATGACTGCTGGAAATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CCA 90 bp TATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATACTGGAATAAGGTGTTaGCTAGTATCATCTGATTCC +
Preference number: 4 (lower is better)
Translates to: YLNSVFNRTACNAKAQRHTGIRC*LVSSDS
Trigger: GGAATCAGATGATACTAGCCAACACCTTATTCCAGT...ATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAACAAACTTTGACCAGATaGTCATTTCCACCTGTGACA +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQQTLTR*SFPPVT
Trigger: TGTCACAGGTGGAAATGACCATCTGGTCAAAGTTTG...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGAATATATTGATTTCCTaGACTTATGCGGATGCGTGT +
Preference number: 4 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSENILIS*TYADAC
Trigger: ACACGCATCCGCATAAGTCCAGGAAATCAATATATT...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
3UTR CAA 72 bp GTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTaGGAAGATCCAATTCCCATACTCGAATTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: VLFGTQLARFFY*EDPIPILELSH
Trigger: GTGGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575247.5
CDS-3UTR TCA 90 bp ATTCTTTTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGATCAATTTTGCCTTTGTaGAGGGACAGCCGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: ILFNCPVWHSVGQIFLFGSILPL*RDSRAS
Trigger: GCTTGCTCGGCTGTCCCTTCACAAAGGCAAAATTGA...TCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR GCA 90 bp ATGAGTTCTGAAAACTCCGAACGCAGACACATACTTTCCAGCAGTCATAAACATCCAGAGCTTCAATTTTaGCTTTGTGAAGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: MSSENSERRHILSSSHKHPELQF*LCEGTA
Trigger: GGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGG...ATGTTTATGACTGCTGGAAAGTATGTGTCTGCGTTCGGAGTTTTCAGAACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576499.1
CDS-3UTR GCA 90 bp CCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGAATTGTCCCACATGTCATCTCTCTTGGCTATaGTCCACACCACCACACTTC +
Preference number: 4 (lower is better)
Translates to: PDFSIWKIQFPYSNCPTCHLSWL*STPPHF
Trigger: GAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATG...ACATGTGGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575247.5
CDS-3UTR GCA 90 bp TTCGCAGGCCCAACATCTGTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATATCTCCAGTCGTGGTaGCAAGGTAGAAAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: FAGPTSVSSLVLGFIFRIYLQSW*QGRKSY
Trigger: ATAGCTTTTTCTACCTTGGCACCACGACTGGAGATA...TATTCTAAAAATGAACCCCAGGACTAAACTGCTGACAGATGTTGGGCCTGCGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR GCA 90 bp TCGCAAAATGGCTCCATCGGCACTTACACTAACAATATATTGATTTCCTGGACTCTGTTGGATGATGTGTaGCACACCCTGATATCCTTC +
Preference number: 4 (lower is better)
Translates to: SQNGSIGTYTNNILISWTLLDDV*HTLISF
Trigger: GAAGGATATCAGGGTGTGGCACACATCATCCAACAG...AGTCCAGGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp GTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCATGTTTGGCACTCAGTTaGCCAGATTTTTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: VSSLVLGFIFRISPVVVPCLALS*PDFSIW
Trigger: CCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACA...TGGCACCACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR CCA 90 bp TTTTCCAGCAGTCATAAACATCTCATCCCGGCACCTGGAGAAGATCACATTGGTTGTTTGGCACTCAGTTaGCCAGATTTTTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: FSSSHKHLIPAPGEDHIGCLALS*PDFSIW
Trigger: CCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACA...ACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTATGACTGCTGGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575247.5
CDS-3UTR CCA 90 bp ACATCTGTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGTTCAACTGTCCTGTTTaGCACTCAGTTGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: TSVSSLVLGFIFRISPVVFNCPV*HSVGQI
Trigger: AATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAA...CACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGACAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR CCA 90 bp TCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCATTCAACTGTCCTGTTTaGCACTCAGTTGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: STVLFGTQLARFFYLEDPFNCPV*HSVGQI
Trigger: AATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAA...TGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR CCA 90 bp TATGGGTACTTCCATCGCAAAATGGCTCCATCGGCACTTACACTAACAATATATACTTCCATCGCAAAATaGCTCCATCGGCACTTACAC +
Preference number: 4 (lower is better)
Translates to: YGYFHRKMAPSALTLTIYTSIAK*LHRHLH
Trigger: GTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAGT...ATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAGTACCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
3UTR CAA 72 bp GTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTaGGAAGATCCAATTCCCATACTCGAATTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: VLFGTQLARFFY*EDPIPILELSH
Trigger: ATGGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR TCA 90 bp TGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGATATTTATTGCCTGAATaGGGACTGTGCAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: WHSVGQIFLFGRSNSHTRYLLPE*GLCNQE
Trigger: CTCTTGGTTGCACAGTCCTCATTCAGGCAATAAATA...TCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp AATATCTCCAGTCGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATCCACTCCCCACTCCAATACTCATaGCTATTCTTTTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: NISSRGAKVEKAIIIIHSPLQYS*LFFSTV
Trigger: GACAGTTGAAAAGAATAGTCATGAGTATTGGAGTGG...GGAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACGACTGGAGATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR TCA 90 bp ATGACTATTCTTTTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTACAGGCACCTGATAGCTaGCACTCCCAAACTGAATTT +
Preference number: 4 (lower is better)
Translates to: MTILFNCPVWHSVGQIFLQAPDS*HSQTEF
Trigger: AAATTCAGTTTGGGAGTGTCAGCTATCAGGTGCCTG...TAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAATAGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR TCA 90 bp TCGCAAAATGGCTCCATCGGCACTTACACTAACAATATATTGATTTCCTGGACTATGCCGCCTTGTAACTaGATCTTCTTGATGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SQNGSIGTYTNNILISWTMPPCN*IFLMGL
Trigger: CAAACCCATCAAGAAGATTCAGTTACAAGGCGGCAT...AGTCCAGGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR GCA 90 bp GTGAAGGGACAGCCGAGCAAGCAGCTCTCTGTTCTTATAATCCCACAAAATGATCTCTTTAGTATTTATTaGCTGAATGAGGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: VKGQPSKQLSVLIIPQNDLFSIY*LNEDCA
Trigger: TGCACAGTCCTCATTCAGGCAATAAATACTAAAGAG...ATCATTTTGTGGGATTATAAGAACAGAGAGCTGCTTGCTCGGCTGTCCCTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCTTTGTTATCCATCCTTaGGAGGTTCTGATTACTTTG +
Preference number: 4 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRFVIHP*EVLITL
Trigger: CAAAGTAATCAGAACCTCCCAAGGATGGATAACAAA...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAATTTGTTATCCATCCTTaGGAGGTTCTGATTACTTTG +
Preference number: 4 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQFVIHP*EVLITL
Trigger: CAAAGTAATCAGAACCTCCCAAGGATGGATAACAAA...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CCA 90 bp AAGATCCAATTCCCATACTCGAATTGTCCCATTTCCAGCAGTCATAAACATCTCGAATATCTCCAGTCGTaGTGCCAAGGTAGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: KIQFPYSNCPISSSHKHLEYLQS*CQGRKS
Trigger: GCTTTTTCTACCTTGGCACCACGACTGGAGATATTC...GAGATGTTTATGACTGCTGGAAATGGGACAATTCGAGTATGGGAATTGGATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
3UTR CAA 72 bp CAAAATGGCTCCATCGGCACTTACACTAACAATATATaGATTTCCTGGACTTATGCGGATGCGTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: QNGSIGTYTNNI*ISWTYADACDV
Trigger: AACATCACACGCATCCGCATAAGTCCAGGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
CDS-3UTR TCA 90 bp ACATCTGTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGCCACTCCAATACTCATaGCTATTCTTTTCAACTGTC +
Preference number: 4 (lower is better)
Translates to: TSVSSLVLGFIFRISPVVPLQYS*LFFSTV
Trigger: GACAGTTGAAAAGAATAGTCATGAGTATTGGAGTGG...CACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGACAGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR TCA 90 bp CCATCGCAAAATGGCTCCATCGGCACTTACACTAACAATATATTGATTTCCTGGTATAATCCCAAACTTTaGCCAGATGGTCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: PSQNGSIGTYTNNILISWYNPKL*PDGHFH
Trigger: GTGGAAATGACCATCTGGTCAAAGTTTGGGATTATA...CCAGGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
CDS-3UTR GCA 90 bp AAGATCCAATTCCCATACTCGAATTGTCCCATTTCCAGCAGTCATAAACATCTCTATCTCCAGTCGTGGTaGCAAGGTAGAAAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: KIQFPYSNCPISSSHKHLYLQSW*QGRKSY
Trigger: ATAGCTTTTTCTACCTTGGCACCACGACTGGAGATA...GAGATGTTTATGACTGCTGGAAATGGGACAATTCGAGTATGGGAATTGGATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CCA 90 bp TCTGTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGGTGTTTGTTATCCATCCTTaGGAGGTTCTGATTACTTTG +
Preference number: 4 (lower is better)
Translates to: SVSSLVLGFIFRISPVVVFVIHP*EVLITL
Trigger: CAAAGTAATCAGAACCTCCCAAGGATGGATAACAAA...CACCACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR CCA 90 bp CACTCCAATACTCATGACTATTCTTTTCAACTGTCCTGTTTGGCACTCAGTTGGTGTTTGGCACTCAGTTaGCCAGATTTTTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: HSNTHDYSFQLSCLALSWCLALS*PDFSIW
Trigger: CCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACA...CCAACTGAGTGCCAAACAGGACAGTTGAAAAGAATAGTCATGAGTATTGGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR TCA 90 bp CAATTTATGAGTTCTGAAAACTCCGAACGCAGACACATACTTTCCAGCAGTCATTTAGTATTTATTGCCTaGATGAGGACTGTGCAACCA +
Preference number: 4 (lower is better)
Translates to: QFMSSENSERRHILSSSHLVFIA*MRTVQP
Trigger: TGGTTGCACAGTCCTCATTCAGGCAATAAATACTAA...ATGACTGCTGGAAAGTATGTGTCTGCGTTCGGAGTTTTCAGAACTCATAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576499.1
CDS-3UTR TCA 90 bp AGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGAATTGTCCCTATAATCCCAAACTTTaGCCAGATGGTCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: SWPDFSIWKIQFPYSNCPYNPKL*PDGHFH
Trigger: GTGGAAATGACCATCTGGTCAAAGTTTGGGATTATA...GGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CCA 90 bp TTCTTTTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGAACAAGTACAAATCATTTaGAGAAAAGGCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: FFSTVLFGTQLARFFYLEQVQII*RKGQSF
Trigger: GAAGCTCTGGCCTTTTCTCCAAATGATTTGTACTTG...TTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CCA 90 bp GGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCAAGGTAGAAAAAGCTATCATCAAGTACAAATCATTTaGAGAAAAGGCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GSFLEYLQSWCQGRKSYHQVQII*RKGQSF
Trigger: GAAGCTCTGGCCTTTTCTCCAAATGATTTGTACTTG...ATGATAGCTTTTTCTACCTTGGCACCACGACTGGAGATATTCTAAAAATGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
3UTR CAA 72 bp TCCAATACTCATGACTATTCTTTTCAACTGTCCTGTTaGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SNTHDYSFQLSC*ALSWPDFSIWK
Trigger: CTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAATAGTCATGAGTATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CAA 90 bp CCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCCGTGGCAGGTCATGTaGGGCACGGTGATCCGCAGC +
Preference number: 5 (lower is better)
Translates to: PTLRPAAGLPQMASLLAMPWQVM*GTVIRS
Trigger: GCTGCGGATCACCGTGCCCAACATGACCTGCCACGG...CATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp GGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACTTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTT +
Preference number: 5 (lower is better)
Translates to: GCRAATDGISLGYAPHHHFQLRH*GLRRNF
Trigger: AAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAA...GTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp AGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCCCCCATGAATGTGACTaGTCCGGAGGCGATGTACTC +
Preference number: 5 (lower is better)
Translates to: RPAAGLPQMASLLAMLHTPHECD*SGGDVL
Trigger: GAGTACATCGCCTCCGGACAAGTCACATTCATGGGG...GGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp GGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCGTGGGCACATGTCCATaGAAGCCGATCACGGCGTCA +
Preference number: 5 (lower is better)
Translates to: GEDHIGGIANIEAGCRAAVGTCP*KPITAS
Trigger: TGACGCCGTGATCGGCTTCAATGGACATGTGCCCAC...GGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576499.1
CDS-3UTR CAA 90 bp GATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATCGCAGCAGCTCCCTGTaGGATGATGTGTGCCACACC +
Preference number: 5 (lower is better)
Translates to: DHIGGIANIEAGCRAATDRSSSL*DDVCHT
Trigger: GGTGTGGCACACATCATCCAACAGGGAGCTGCTGCG...ATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCCCGTGGCAGGTCATGTaGGGCACGGTGATCCGCAGC +
Preference number: 5 (lower is better)
Translates to: SVFNRTACNAKAQRHLISPWQVM*GTVIRS
Trigger: GCTGCGGATCACCGTGCCCAACATGACCTGCCACGG...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp CACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCGGATGCGTGTGATGTaGCCACTGTGTCCCACCCCA +
Preference number: 5 (lower is better)
Translates to: HLEKITLVALPTLRPAAGRMRVM*PLCPTP
Trigger: TGGGGTGGGACACAGTGGCAACATCACACGCATCCG...CCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp AGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCGAGGTTCTGATTACTTaGCTCTCCTCCCTAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RPAAGLPQMASLLAMLHTEVLIT*LSSLVA
Trigger: AGCCACTAGGGAGGAGAGCAAAGTAATCAGAACCTC...GGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575247.5
CDS-3UTR CAA 90 bp CACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCGAATTGTCCCACATGTaGGCCAGGATGGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: HIGGIANIEAGCRAATDGELSHM*ARMVSI
Trigger: GATGGAGACCATCCTGGCCAACATGTGGGACAATTC...GCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575247.5
CDS-3UTR CAA 90 bp ATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCGCCTCCGGCGAAATTTaGTTATCCATCCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: IGGIANIEAGCRAATDGIASGEI*LSILGR
Trigger: CCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGC...GATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp ATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCTGGGCCTTTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTT +
Preference number: 5 (lower is better)
Translates to: MASLLAMLHTTTLPSSGPFQLRH*GLRRNF
Trigger: AAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAA...AGGCCCAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp CGCACAAGGTCCCAAATGATACAAGTCCCATCGGTGCTGGCGGTGACACACTCCCCCCATGAATGTGACTaGTCCGGAGGCGATGTACTC +
Preference number: 5 (lower is better)
Translates to: RTRSQMIQVPSVLAVTHSPHECD*SGGDVL
Trigger: GAGTACATCGCCTCCGGACAAGTCACATTCATGGGG...GGAGTGTGTCACCGCCAGCACCGATGGGACTTGTATCATTTGGGACCTTGTGCG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp TGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTCAGATGGCATCTCTCTaGGCTATGCTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: CRAATDGISLGYAPHHHTQMASL*AMLHTT
Trigger: GGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTG...AGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp ATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCATCACATTGGTGGCATaGCCAACATTGAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: IGGIANIEAGCRAATDGIITLVA*PTLRPA
Trigger: AGCCGGCCTCAATGTTGGCAATGCCACCAATGTGAT...GATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp ATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACCTTCTTGGCACAGGTaGCAAATAGCTCAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: IEAGCRAATDGISLGYAPPSWHR*QIAQQC
Trigger: GCACTGCTGAGCTATTTGCAACCTGTGCCAAGAAGG...TGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS CCA 90 bp CAGCTCCGCCACTTGGGCCTCCGGCGAAATTTTGTTATCCATCCTTaGGAGGTTCTGATTACTTTGCTCTCCTCCCTAGTGGCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: QLRHLGLRRNFVIHP*EVLITLLSSLVAAA
Trigger: CGCTGCAGCCACTAGGGAGGAGAGCAAAGTAATCAGAACCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574937.5
ENST00000575247.5
CDS-3UTR CAA 90 bp CACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGGCCTCCGGCGAAATTTaGTTATCCATCCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: HLEKITLVALPTLRPAAGASGEI*LSILGR
Trigger: CCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGC...CCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTT +
Preference number: 5 (lower is better)
Translates to: SVFNRTACNAKAQRHLISFQLRH*GLRRNF
Trigger: AAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAA...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp GATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATATCACATTGGTGGCATaGCCAACATTGAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: DHIGGIANIEAGCRAATDITLVA*PTLRPA
Trigger: AGCCGGCCTCAATGTTGGCAATGCCACCAATGTGAT...ATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp CTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGATCACATTGGTGGCATaGCCAACATTGAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: LEKITLVALPTLRPAAGLITLVA*PTLRPA
Trigger: AGCCGGCCTCAATGTTGGCAATGCCACCAATGTGAT...CAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCCGGATGCGTGTGATGTaGCCACTGTGTCCCACCCCA +
Preference number: 5 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLRMRVM*PLCPTP
Trigger: TGGGGTGGGACACAGTGGCAACATCACACGCATCCG...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CAA 90 bp CCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGATTCCCATACTCGAATaGTCCCACATGTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PTLRPAAGLPQMASLLAMIPILE*SHMLAR
Trigger: CCTGGCCAACATGTGGGACAATTCGAGTATGGGAAT...CATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575247.5
CDS-3UTR CAA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCTTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTT +
Preference number: 5 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLFQLRH*GLRRNF
Trigger: AAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAA...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp CCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGTTTCAACTGTCCTGTTaGGCACTCAGTTGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: PTLRPAAGLPQMASLLAMFQLSC*ALSWPD
Trigger: ATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAA...CATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR CAA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCGCAGCAGCTCCCTGTaGGATGATGTGTGCCACACC +
Preference number: 5 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSRSSSL*DDVCHT
Trigger: GGTGTGGCACACATCATCCAACAGGGAGCTGCTGCG...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCCGTGGCAGGTCATGTaGGGCACGGTGATCCGCAGC +
Preference number: 5 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRPWQVM*GTVIRS
Trigger: GCTGCGGATCACCGTGCCCAACATGACCTGCCACGG...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp GAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGCGGATGCGTGTGATGTaGCCACTGTGTCCCACCCCA +
Preference number: 5 (lower is better)
Translates to: ELSKLSLQQDCVQRQGSERMRVM*PLCPTP
Trigger: TGGGGTGGGACACAGTGGCAACATCACACGCATCCG...CTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CAA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCGTGGGCACATGTCCATaGAAGCCGATCACGGCGTCA +
Preference number: 5 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGVGTCP*KPITAS
Trigger: TGACGCCGTGATCGGCTTCAATGGACATGTGCCCAC...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352665.10
CDS-3UTR CAA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTGGTCAGGATGGCATTaGAGACCAGTGGGCACATGT +
Preference number: 5 (lower is better)
Translates to: SVFNRTACNAKAQRHLISWSGWH*RPVGTC
Trigger: ACATGTGCCCACTGGTCTCAAATGCCATCCTGACCA...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR CAA 90 bp CACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCTGTGGTCAGGATGGCATTaGAGACCAGTGGGCACATGT +
Preference number: 5 (lower is better)
Translates to: HRWHLSWLCSTPPHFRHLWSGWH*RPVGTC
Trigger: ACATGTGCCCACTGGTCTCAAATGCCATCCTGACCA...CAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCCCCCATGAATGTGACTaGTCCGGAGGCGATGTACTC +
Preference number: 5 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLPHECD*SGGDVL
Trigger: GAGTACATCGCCTCCGGACAAGTCACATTCATGGGG...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR CAA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCACAGATGGCATCTCTCTaGGCTATGCTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: TQSSTGLRATPRLRDISSQMASL*AMLHTT
Trigger: GGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTG...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp GATCACATTGGTGGCATTGCCAACATTGAGGCCGGCTGCAGGGCTGCCACAGATCTGGAGAAGATCACATaGGTGGCATTGCCAACATTG +
Preference number: 5 (lower is better)
Translates to: DHIGGIANIEAGCRAATDLEKIT*VALPTL
Trigger: CAATGTTGGCAATGCCACCAATGTGATCTTCTCCAG...ATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTTGGCAATGCCACCAATGTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp AACATTGAGGCCGGCTGCAGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTACCCTGATATCCTTCTaGGCACAGGTTGCAAATAGC +
Preference number: 5 (lower is better)
Translates to: NIEAGCRAATDGISLGYATLISF*AQVANS
Trigger: GCTATTTGCAACCTGTGCCAAGAAGGATATCAGGGT...AGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCTGCAGCCGGCCTCAATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACGCAGCAGCTCCCTGTaGGATGATGTGTGCCACACC +
Preference number: 5 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRRSSSL*DDVCHT
Trigger: GGTGTGGCACACATCATCCAACAGGGAGCTGCTGCG...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp TGGAAGATCCAATTCCCATACTCGAATTGTCCCACATGTTGGCCAGGATGGTCTTTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTT +
Preference number: 5 (lower is better)
Translates to: WKIQFPYSNCPTCWPGWSFQLRH*GLRRNF
Trigger: AAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAA...AGACCATCCTGGCCAACATGTGGGACAATTCGAGTATGGGAATTGGATCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575247.5
CDS-3UTR CAA 90 bp CTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCACTGGAGAAGATCACATaGGTGGCATTGCCAACATTG +
Preference number: 5 (lower is better)
Translates to: LPQMASLLAMLHTTTLPSLEKIT*VALPTL
Trigger: CAATGTTGGCAATGCCACCAATGTGATCTTCTCCAG...TGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCCAGGACACTGATGACTaGTGTTCCTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGQDTDD*CSFRAS
Trigger: GGAGGCCCTGAAGGAACACAAGTCATCAGTGTCCTG...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CAA 90 bp AAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATGCCTCCGGCGAAATTTaGTTATCCATCCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: KLSLQQDCVQRQGSETSHASGEI*LSILGR
Trigger: CCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGC...ATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACAGATGGCATCTCTCTaGGCTATGCTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRQMASL*AMLHTT
Trigger: GGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTG...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp AATCTTTCTGTCTGTTCCGCTGGTGATGATCTGGAACTCCTCAGGGTGATAGCACAGATGGCATCTCTCTaGGCTATGCTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: NLSVCSAGDDLELLRVIAQMASL*AMLHTT
Trigger: GGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTG...TGCTATCACCCTGAGGAGTTCCAGATCATCACCAGCGGAACAGACAGAAAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp CACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCGTCATCTGCTGGAGAAGATCACATaGGTGGCATTGCCAACATTG +
Preference number: 5 (lower is better)
Translates to: HRWHLSWLCSTPPHFRHLLEKIT*VALPTL
Trigger: CAATGTTGGCAATGCCACCAATGTGATCTTCTCCAG...CAGATGACGGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS-3UTR CAA 90 bp AGGGCTGCCACAGATGGCATCTCTCTTGGCTATGCTCCACACCACCACACTTCCCTGTTTGGCACTCAGTaGGCCAGATTTTTCTATTTG +
Preference number: 5 (lower is better)
Translates to: RAATDGISLGYAPHHHTSLFGTQ*ARFFYL
Trigger: CAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAG...GGAAGTGTGGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTGTGGCAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR CAA 90 bp ATTGATGGGTTTGTAGCCAGGGCTTTTACAGAAGACCAGCAGTCCGGCTCCAGAACTCCCAAACTGAATTaGTCCTTCGCAGGCCCAACA +
Preference number: 5 (lower is better)
Translates to: IDGFVARAFTEDQQSGSRTPKLN*SFAGPT
Trigger: TGTTGGGCCTGCGAAGGACAAATTCAGTTTGGGAGT...TCTGGAGCCGGACTGCTGGTCTTCTGTAAAAGCCCTGGCTACAAACCCATCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574937.5
CDS-3UTR CAA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCCTTCTTGGCACAGGTaGCAAATAGCTCAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSPSWHR*QIAQQC
Trigger: GCACTGCTGAGCTATTTGCAACCTGTGCCAAGAAGG...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCGCTGAAATGATGCTTTaGCCGTCCCTCATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLAEMML*PSLMKS
Trigger: CGACTTCATGAGGGACGGCAAAAGCATCATTTCAGC...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCACAGGACACTGATGACTaGTGTTCCTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSQDTDD*CSFRAS
Trigger: GGAGGCCCTGAAGGAACACAAGTCATCAGTGTCCTG...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CAA 90 bp TTCGCAGGCCCAACATCTGTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTT +
Preference number: 5 (lower is better)
Translates to: FAGPTSVSSLVLGFIFRIFQLRH*GLRRNF
Trigger: AAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAA...TATTCTAAAAATGAACCCCAGGACTAAACTGCTGACAGATGTTGGGCCTGCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR CAA 90 bp GTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCACTCCCAAACTGAATTaGTCCTTCGCAGGCCCAACA +
Preference number: 5 (lower is better)
Translates to: VLELSKLSLQQDCVQRQGTPKLN*SFAGPT
Trigger: TGTTGGGCCTGCGAAGGACAAATTCAGTTTGGGAGT...GCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp AACGCCAAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATGGGTACTTCCACTCCCAAACTGAATTaGTCCTTCGCAGGCCCAACA +
Preference number: 5 (lower is better)
Translates to: NAKAQRHLISFRRYMGTSTPKLN*SFAGPT
Trigger: TGTTGGGCCTGCGAAGGACAAATTCAGTTTGGGAGT...GGAAGTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCTTGGCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTATGAGCGTCTCTTaGAAATCCGTGAAGCTGACA +
Preference number: 5 (lower is better)
Translates to: TQSSTGLRATPRLRDISSAMSVS*KSVKLT
Trigger: TGTCAGCTTCACGGATTTCAAAGAGACGCTCATAGC...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp TATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCCTTCTTGGCACAGGTaGCAAATAGCTCAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: YLNSVFNRTACNAKAQRHPSWHR*QIAQQC
Trigger: GCACTGCTGAGCTATTTGCAACCTGTGCCAAGAAGG...ATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp AGACATCTCATCAGCTTCAGGAGGTATATGGGTACTTCCATCGCAAAATGGCTCCAGGACACTGATGACTaGTGTTCCTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RHLISFRRYMGTSIAKWLQDTDD*CSFRAS
Trigger: GGAGGCCCTGAAGGAACACAAGTCATCAGTGTCCTG...GAGCCATTTTGCGATGGAAGTACCCATATACCTCCTGAAGCTGATGAGATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CAA 90 bp TCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTGTGACACACTCCTCGTaGTTCCTCTTCACCCTAATG +
Preference number: 5 (lower is better)
Translates to: SKLSLQQDCVQRQGSETSVTHSS*FLFTLM
Trigger: CATTAGGGTGAAGAGGAACAACGAGGAGTGTGTCAC...AGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CAA 90 bp GTATATGGGTACTTCCATCGCAAAATGGCTCCATCGGCACTTACACTAACAATACGGATGCGTGTGATGTaGCCACTGTGTCCCACCCCA +
Preference number: 5 (lower is better)
Translates to: VYGYFHRKMAPSALTLTIRMRVM*PLCPTP
Trigger: TGGGGTGGGACACAGTGGCAACATCACACGCATCCG...TATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAGTACCCATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CAA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGGTTCTGATTACTTaGCTCTCCTCCCTAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSEVLIT*LSSLVA
Trigger: AGCCACTAGGGAGGAGAGCAAAGTAATCAGAACCTC...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000396219.7
CDS-3UTR CAA 90 bp ATTTCCAGCAGTCATAAACATCTCATCCCGGCACCTGGAGAAGATCACATTGGTGCCTCCGGCGAAATTTaGTTATCCATCCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ISSSHKHLIPAPGEDHIGASGEI*LSILGR
Trigger: CCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGC...ACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTATGACTGCTGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CAA 90 bp CGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATCCACTCCAATACTCATGACCAGATGGCATCTCTCTaGGCTATGCTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: RGAKVEKAIIIIHSNTHDQMASL*AMLHTT
Trigger: GGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTG...GTCATGAGTATTGGAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CAA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCATCACATTGGTGGCATaGCCAACATTGAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRITLVA*PTLRPA
Trigger: AGCCGGCCTCAATGTTGGCAATGCCACCAATGTGAT...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATTCCCATACTCGAATaGTCCCATTTCCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLIPILE*SHFQQS
Trigger: TGACTGCTGGAAATGGGACAATTCGAGTATGGGAAT...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp CATCTCATCCCGGCACCTGGAGAAGATCACATTGGTGGCATTGCCAACATTGAGATTCCCATACTCGAATaGTCCCATTTCCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: HLIPAPGEDHIGGIANIEIPILE*SHFQQS
Trigger: TGACTGCTGGAAATGGGACAATTCGAGTATGGGAAT...CTCAATGTTGGCAATGCCACCAATGTGATCTTCTCCAGGTGCCGGGATGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CAA 90 bp TATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATGCTGAAATGATGCTTTaGCCGTCCCTCATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: YLNSVFNRTACNAKAQRHAEMML*PSLMKS
Trigger: CGACTTCATGAGGGACGGCAAAAGCATCATTTCAGC...ATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGAGTGACACACTCCTCGTaGTTCCTCTTCACCCTAATG +
Preference number: 5 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRVTHSS*FLFTLM
Trigger: CATTAGGGTGAAGAGGAACAACGAGGAGTGTGTCAC...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CAA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGAGGTTCTGATTACTTaGCTCTCCTCCCTAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQEVLIT*LSSLVA
Trigger: AGCCACTAGGGAGGAGAGCAAAGTAATCAGAACCTC...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000396219.7
CDS-3UTR CAA 90 bp AATATCTCCAGTCGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATCCACTCCGCCTCCGGCGAAATTTaGTTATCCATCCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: NISSRGAKVEKAIIIIHSASGEI*LSILGR
Trigger: CCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGC...GGAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACGACTGGAGATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR CAA 90 bp TCTGTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGGTGGCCTCCGGCGAAATTTaGTTATCCATCCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: SVSSLVLGFIFRISPVVVASGEI*LSILGR
Trigger: CCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGC...CACCACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR CAA 90 bp CTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCAAAATGATGTCTGCCTaGAACCCCATGAATGTGACT +
Preference number: 5 (lower is better)
Translates to: LNSVFNRTACNAKAQRHLKMMSA*NPMNVT
Trigger: AGTCACATTCATGGGGTTCAAGGCAGACATCATTTT...GAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR CAA 90 bp ACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAAAAATGATGTCTGCCTaGAACCCCATGAATGTGACT +
Preference number: 5 (lower is better)
Translates to: TQSSTGLRATPRLRDISSKMMSA*NPMNVT
Trigger: AGTCACATTCATGGGGTTCAAGGCAGACATCATTTT...TGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352665.10
ENST00000576630.5
CDS-3UTR CAA 90 bp CCATTTCCAGCAGTCATAAACATCTCATCCCGGCACCTGGAGAAGATCACATTGTTTCAACTGTCCTGTTaGGCACTCAGTTGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: PFPAVINISSRHLEKITLFQLSC*ALSWPD
Trigger: ATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAA...CAATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTATGACTGCTGGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CAA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAACTCCCAAACTGAATTaGTCCTTCGCAGGCCCAACA +
Preference number: 5 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQTPKLN*SFAGPT
Trigger: TGTTGGGCCTGCGAAGGACAAATTCAGTTTGGGAGT...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp CCCATTTCCAGCAGTCATAAACATCTCATCCCGGCACCTGGAGAAGATCACATTGCTATGAGCGTCTCTTaGAAATCCGTGAAGCTGACA +
Preference number: 5 (lower is better)
Translates to: PISSSHKHLIPAPGEDHIAMSVS*KSVKLT
Trigger: TGTCAGCTTCACGGATTTCAAAGAGACGCTCATAGC...AATGTGATCTTCTCCAGGTGCCGGGATGAGATGTTTATGACTGCTGGAAATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp TATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCACAAAATGATGTCATaGAAGCCGATCACGGCGTCA +
Preference number: 5 (lower is better)
Translates to: YLNSVFNRTACNAKAQRHHKMMS*KPITAS
Trigger: TGACGCCGTGATCGGCTTCAATGACATCATTTTGTG...ATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396219.7
CDS-3UTR CAA 90 bp TTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAGGAGAACAGGACCATaGAAGCCGATCACGGCGTCA +
Preference number: 5 (lower is better)
Translates to: FNCPVWHSVGQIFLFGRSRRTGP*KPITAS
Trigger: TGACGCCGTGATCGGCTTCAATGGTCCTGTTCTCCT...GGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp GGCCCAACATCTGTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCATCGAATTGTCCCACATaGAAGCCGATCACGGCGTCA +
Preference number: 5 (lower is better)
Translates to: GPTSVSSLVLGFIFRISPSNCPT*KPITAS
Trigger: TGACGCCGTGATCGGCTTCAATGTGGGACAATTCGA...TGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGACAGATGTTGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574937.5
CDS-3UTR CAA 90 bp CGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATCCACTCCAATACTCATGACGAGGTTCTGATTACTTaGCTCTCCTCCCTAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RGAKVEKAIIIIHSNTHDEVLIT*LSSLVA
Trigger: AGCCACTAGGGAGGAGAGCAAAGTAATCAGAACCTC...GTCATGAGTATTGGAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574937.5
CDS-3UTR CAA 90 bp TCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACATCTCATCAGCTTTTGTTATCCATCCTaGGGAGGTTCTGATTACTTT +
Preference number: 5 (lower is better)
Translates to: SVFNRTACNAKAQRHLISFCYPS*GGSDYF
Trigger: AAAGTAATCAGAACCTCCCAAGGATGGATAACAAAA...GCTGATGAGATGTCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp ATTCTTTTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTTGGATTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTT +
Preference number: 5 (lower is better)
Translates to: ILFNCPVWHSVGQIFLFGFQLRH*GLRRNF
Trigger: AAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAA...TCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CAA 90 bp ATGAGTTCTGAAAACTCCGAACGCAGACACATACTTTCCAGCAGTCATAAACATCAGATGGCATCTCTCTaGGCTATGCTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: MSSENSERRHILSSSHKHQMASL*AMLHTT
Trigger: GGTGGTGTGGAGCATAGCCAAGAGAGATGCCATCTG...ATGTTTATGACTGCTGGAAAGTATGTGTCTGCGTTCGGAGTTTTCAGAACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576499.1
CDS-3UTR CAA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAACTGGAGAAGATCACATaGGTGGCATTGCCAACATTG +
Preference number: 5 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQLEKIT*VALPTL
Trigger: CAATGTTGGCAATGCCACCAATGTGATCTTCTCCAG...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp TTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAATTCCCATACTCGAATaGTCCCATTTCCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LELSKLSLQQDCVQRQGSIPILE*SHFQQS
Trigger: TGACTGCTGGAAATGGGACAATTCGAGTATGGGAAT...TGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp TGCAACGCCAAGGCTCAGAGACATCTCATCAGCTTCAGGAGGTATATGGGTACTCTGTTTGGCACTCAGTaGGCCAGATTTTTCTATTTG +
Preference number: 5 (lower is better)
Translates to: CNAKAQRHLISFRRYMGTLFGTQ*ARFFYL
Trigger: CAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAG...AGTACCCATATACCTCCTGAAGCTGATGAGATGTCTCTGAGCCTTGGCGTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCTTTCAACTGTCCTGTTaGGCACTCAGTTGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRFQLSC*ALSWPD
Trigger: ATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAA...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAATTTCAACTGTCCTGTTaGGCACTCAGTTGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQFQLSC*ALSWPD
Trigger: ATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAA...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp AGACTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCGCTATGAGCGTCTCTTaGAAATCCGTGAAGCTGACA +
Preference number: 5 (lower is better)
Translates to: RLVLELSKLSLQQDCVQRAMSVS*KSVKLT
Trigger: TGTCAGCTTCACGGATTTCAAAGAGACGCTCATAGC...GCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAACCCTGATATCCTTCTaGGCACAGGTTGCAAATAGC +
Preference number: 5 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQTLISF*AQVANS
Trigger: GCTATTTGCAACCTGTGCCAAGAAGGATATCAGGGT...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp AAGATCCAATTCCCATACTCGAATTGTCCCATTTCCAGCAGTCATAAACATCTCCAGGACACTGATGACTaGTGTTCCTTCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: KIQFPYSNCPISSSHKHLQDTDD*CSFRAS
Trigger: GGAGGCCCTGAAGGAACACAAGTCATCAGTGTCCTG...GAGATGTTTATGACTGCTGGAAATGGGACAATTCGAGTATGGGAATTGGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp GAATATCTCCAGTCGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATCCACTCGTGACACACTCCTCGTaGTTCCTCTTCACCCTAATG +
Preference number: 5 (lower is better)
Translates to: EYLQSWCQGRKSYHHHPLVTHSS*FLFTLM
Trigger: CATTAGGGTGAAGAGGAACAACGAGGAGTGTGTCAC...GAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACGACTGGAGATATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp ATGAGTTCTGAAAACTCCGAACGCAGACACATACTTTCCAGCAGTCATAAACATTGGTCAGGATGGCATTaGAGACCAGTGGGCACATGT +
Preference number: 5 (lower is better)
Translates to: MSSENSERRHILSSSHKHWSGWH*RPVGTC
Trigger: ACATGTGCCCACTGGTCTCAAATGCCATCCTGACCA...ATGTTTATGACTGCTGGAAAGTATGTGTCTGCGTTCGGAGTTTTCAGAACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576499.1
CDS-3UTR CAA 90 bp TCGCAAAATGGCTCCATCGGCACTTACACTAACAATATATTGATTTCCTGGACTATCACATTGGTGGCATaGCCAACATTGAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SQNGSIGTYTNNILISWTITLVA*PTLRPA
Trigger: AGCCGGCCTCAATGTTGGCAATGCCACCAATGTGAT...AGTCCAGGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp AATCATTTGGAGAAAAGGCCAGAGCTTCAATTTTGCCTTTGTGAAGGGACAGCCCTGGAGAAGATCACATaGGTGGCATTGCCAACATTG +
Preference number: 5 (lower is better)
Translates to: NHLEKRPELQFCLCEGTALEKIT*VALPTL
Trigger: CAATGTTGGCAATGCCACCAATGTGATCTTCTCCAG...GGCTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGGCCTTTTCTCCAAATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR CAA 90 bp AGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAAGGCTCAGAGACTGTTTGGCACTCAGTaGGCCAGATTTTTCTATTTG +
Preference number: 5 (lower is better)
Translates to: SYLNSVFNRTACNAKAQRLFGTQ*ARFFYL
Trigger: CAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAG...TCTCTGAGCCTTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp CTAGTGTTGGAGTTATCTAAACTCAGTCTTCAACAGGACTGCGTGCAACGCCAACTGTTTGGCACTCAGTaGGCCAGATTTTTCTATTTG +
Preference number: 5 (lower is better)
Translates to: LVLELSKLSLQQDCVQRQLFGTQ*ARFFYL
Trigger: CAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAG...TTGGCGTTGCACGCAGTCCTGTTGAAGACTGAGTTTAGATAACTCCAACACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000576630.5
CDS-3UTR CAA 90 bp GTCAGCAGTTTAGTCCTGGGGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCACTGTTTGGCACTCAGTaGGCCAGATTTTTCTATTTG +
Preference number: 5 (lower is better)
Translates to: VSSLVLGFIFRISPVVVPLFGTQ*ARFFYL
Trigger: CAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAG...TGGCACCACGACTGGAGATATTCTAAAAATGAACCCCAGGACTAAACTGCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR CAA 90 bp CAAATCATTTGGAGAAAAGGCCAGAGCTTCAATTTTGCCTTTGTGAAGGGACAGTTTCAACTGTCCTGTTaGGCACTCAGTTGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: QIIWRKGQSFNFAFVKGQFQLSC*ALSWPD
Trigger: ATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAA...CTGTCCCTTCACAAAGGCAAAATTGAAGCTCTGGCCTTTTCTCCAAATGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR CAA 90 bp CTTCCATCGCAAAATGGCTCCATCGGCACTTACACTAACAATATATTGATTTCCGTGACACACTCCTCGTaGTTCCTCTTCACCCTAATG +
Preference number: 5 (lower is better)
Translates to: LPSQNGSIGTYTNNILISVTHSS*FLFTLM
Trigger: CATTAGGGTGAAGAGGAACAACGAGGAGTGTGTCAC...GGAAATCAATATATTGTTAGTGTAAGTGCCGATGGAGCCATTTTGCGATGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574097.1
ENST00000576630.5
CDS-3UTR CAA 90 bp AGTCGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATCCACTCCAATACTCATATTCCCATACTCGAATaGTCCCATTTCCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SRGAKVEKAIIIIHSNTHIPILE*SHFQQS
Trigger: TGACTGCTGGAAATGGGACAATTCGAGTATGGGAAT...ATGAGTATTGGAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000576630.5
CDS-3UTR CAA 90 bp GGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCAAGGTAGAAAAAGCTATCATGCTGAAATGATGCTTTaGCCGTCCCTCATGAAGTCG +
Preference number: 5 (lower is better)
Translates to: GSFLEYLQSWCQGRKSYHAEMML*PSLMKS
Trigger: CGACTTCATGAGGGACGGCAAAAGCATCATTTCAGC...ATGATAGCTTTTTCTACCTTGGCACCACGACTGGAGATATTCTAAAAATGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS-3UTR CAA 90 bp AGTCGTGGTGCCAAGGTAGAAAAAGCTATCATCATCATCCACTCCAATACTCATATTCCCATACTCGAATaGTCCCACATTGAAGCCGAT +
Preference number: 5 (lower is better)
Translates to: SRGAKVEKAIIIIHSNTHIPILE*SHIEAD
Trigger: ATCGGCTTCAATGTGGGACAATTCGAGTATGGGAAT...ATGAGTATTGGAGTGGATGATGATGATAGCTTTTTCTACCTTGGCACCACGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574937.5
CDS-3UTR CAA 90 bp TGGCACTCAGTTGGCCAGATTTTTCTATTTGGAAGATCCAATTCCCATACTCGACTGTTTGGCACTCAGTaGGCCAGATTTTTCTATTTG +
Preference number: 5 (lower is better)
Translates to: WHSVGQIFLFGRSNSHTRLFGTQ*ARFFYL
Trigger: CAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAG...TCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000575247.5
ENST00000576630.5
CDS-3UTR CAA 90 bp GGTTCATTTTTAGAATATCTCCAGTCGTGGTGCCAAGGTAGAAAAAGCTATCATTTTCAACTGTCCTGTTaGGCACTCAGTTGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: GSFLEYLQSWCQGRKSYHFQLSC*ALSWPD
Trigger: ATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAA...ATGATAGCTTTTTCTACCTTGGCACCACGACTGGAGATATTCTAAAAATGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000572333.5
ENST00000574937.5
ENST00000576630.5
CDS-3UTR CAA 90 bp ATGAGTTCTGAAAACTCCGAACGCAGACACATACTTTCCAGCAGTCATAAACATCCACAAAATGATGTCTaGAACCCCATGAATGTGACT +
Preference number: 5 (lower is better)
Translates to: MSSENSERRHILSSSHKHPQNDV*NPMNVT
Trigger: AGTCACATTCATGGGGTTCAAGACATCATTTTGTGG...ATGTTTATGACTGCTGGAAAGTATGTGTCTGCGTTCGGAGTTTTCAGAACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576499.1
CDS CCA 72 bp AAGCCGATCACGGCGTCAAGTTCCAGCTCCGCCACTTaGGCCTCCGGCGAAATTTTGTTATCCATCCTTGGG +
Preference number: 6 (lower is better)
Translates to: KPITASSSSSAT*ASGEILLSILG
Trigger: CCCAAGGATGGATAACAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAACTTGACGCCGTGATCGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000572333.5
ENST00000574937.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS CAA 72 bp GAAGCCGATCACGGCGTCAAGTTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTTGTTATCCATCCTTGG +
Preference number: 6 (lower is better)
Translates to: EADHGVKFQLRH*GLRRNFVIHPW
Trigger: CCAAGGATGGATAACAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAACTTGACGCCGTGATCGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000572333.5
ENST00000574937.5
ENST00000575247.5
ENST00000576499.1
ENST00000576630.5
CDS CAA 90 bp CCAGCTCCGCCACTTGGGCCTCCGGCGAAATTTTGTTATCCATCCTaGGGAGGTTCTGATTACTTTGCTCTCCTCCCTAGTGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PAPPLGPPAKFCYPS*GGSDYFALLPSGCS
Trigger: GCTGCAGCCACTAGGGAGGAGAGCAAAGTAATCAGAACCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574937.5
ENST00000575247.5
CDS CAA 90 bp AGGACCATTGAAGCCGATCACGGCGTCAAGTTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTTGTTATCCATCCTTGGGAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: RTIEADHGVKFQLRH*GLRRNFVIHPWEVL
Trigger: CAGAACCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAACTTGACGCCGTGATCGGCTTCAATGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576630.5
CDS CAA 90 bp TCCCACATTGAAGCCGATCACGGCGTCAAGTTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTTGTTATCCATCCTTGGGAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: SHIEADHGVKFQLRH*GLRRNFVIHPWEVL
Trigger: CAGAACCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAACTTGACGCCGTGATCGGCTTCAATGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574937.5
CDS CAA 90 bp TCTGCCATTGAAGCCGATCACGGCGTCAAGTTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTTGTTATCCATCCTTGGGAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: SAIEADHGVKFQLRH*GLRRNFVIHPWEVL
Trigger: CAGAACCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAACTTGACGCCGTGATCGGCTTCAATGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572333.5
ENST00000575247.5
CDS CAA 90 bp ATGTCCATTGAAGCCGATCACGGCGTCAAGTTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTTGTTATCCATCCTTGGGAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: MSIEADHGVKFQLRH*GLRRNFVIHPWEVL
Trigger: CAGAACCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAACTTGACGCCGTGATCGGCTTCAATGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352665.10
CDS CAA 90 bp GATGTCATTGAAGCCGATCACGGCGTCAAGTTCCAGCTCCGCCACTaGGGCCTCCGGCGAAATTTTGTTATCCATCCTTGGGAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: DVIEADHGVKFQLRH*GLRRNFVIHPWEVL
Trigger: CAGAACCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGCCCAAGTGGCGGAGCTGGAACTTGACGCCGTGATCGGCTTCAATGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396219.7
CDS CAA 90 bp CTCCGGCGAAATTTTGTTATCCATCCTTGGGAGGTTCTGATTACTTaGCTCTCCTCCCTAGTGGCTGCAGCGTCTTCTGGTCGTTATGGT +
Preference number: 6 (lower is better)
Translates to: LRRNFVIHPWEVLIT*LSSLVAAASSGRYG
Trigger: ACCATAACGACCAGAAGACGCTGCAGCCACTAGGGAGGAGAGCAAAGTAATCAGAACCTCCCAAGGATGGATAACAAAATTTCGCCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396219.7
CDS CCA 72 bp CACTTGGGCCTCCGGCGAAATTTTGTTATCCATCCTTaGGAGGTTCTGATTACTTTGCTCTCCTCCCTAGTG +
Preference number: 6 (lower is better)
Translates to: HLGLRRNFVIHP*EVLITLLSSLV
Trigger: CACTAGGGAGGAGAGCAAAGTAATCAGAACCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGCCCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574937.5
ENST00000575247.5
CDS CAA 72 bp CCACTTGGGCCTCCGGCGAAATTTTGTTATCCATCCTaGGGAGGTTCTGATTACTTTGCTCTCCTCCCTAGT +
Preference number: 6 (lower is better)
Translates to: PLGPPAKFCYPS*GGSDYFALLPS
Trigger: ACTAGGGAGGAGAGCAAAGTAATCAGAACCTCCCAAGGATGGATAACAAAATTTCGCCGGAGGCCCAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352665.10
ENST00000396219.7
ENST00000574937.5
ENST00000575247.5
CDS CAA 72 bp AATTTTGTTATCCATCCTTGGGAGGTTCTGATTACTTaGCTCTCCTCCCTAGTGGCTGCAGCGTCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: NFVIHPWEVLIT*LSSLVAAASSG
Trigger: ACCAGAAGACGCTGCAGCCACTAGGGAGGAGAGCAAAGTAATCAGAACCTCCCAAGGATGGATAACAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396219.7
CDS CAA 90 bp TTTTCAACTGTCCTGTTTGGCACTCAGTTGGCCAGATTTTTCTATTaGGAAGATCCAATTCCCATACTCGAATTGTCCCACATTGAAGCC +
Preference number: 6 (lower is better)
Translates to: FSTVLFGTQLARFFY*EDPIPILELSHIEA
Trigger: GGCTTCAATGTGGGACAATTCGAGTATGGGAATTGGATCTTCCAAATAGAAAAATCTGGCCAACTGAGTGCCAAACAGGACAGTTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574937.5
CDS CAA 72 bp CCTTTCTGTCTGAATTTAGTCAAAGTGATAACCGGTTaGGGCACAGCAATTCTACTCCAGTCTCAGAAATTC +
Preference number: 6 (lower is better)
Translates to: PFCLNLVKVITG*GTAILLQSQKF
Trigger: GAATTTCTGAGACTGGAGTAGAATTGCTGTGCCCAAACCGGTTATCACTTTGACTAAATTCAGACAGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576714.1