RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP44 (Homo sapiens)

Ensembl gene IDs: ENSG00000206530

Ensembl transcript IDs: ENST00000295868.6, ENST00000393845.9, ENST00000461734.1, ENST00000465186.1, ENST00000465510.1, ENST00000473143.1, ENST00000475568.1, ENST00000479422.1, ENST00000488854.6, ENST00000489244.1, ENST00000489938.2, ENST00000490481.1

Found 746 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTGGCAAGAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATaGGGGAACAGCAAGGGGCACGGTATCACAGCCTGGAGACACCCA +
Preference number: 1 (lower is better)
Translates to: SWQEEGSQAHGSSRA*GNSKGHGITAWRHP
Trigger: TGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 90 bp GGGAAGTGTGCCAGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATaGCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCCCA +
Preference number: 1 (lower is better)
Translates to: GKCARSRIASQPPCP*HTLLVYLCLKLNFP
Trigger: TGGGAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCTGGCACACTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 90 bp AAGGCAGGGAAGTGTGCCAGGAGCAGGATAGCTTCCCAGCCACCCTaGCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAAC +
Preference number: 1 (lower is better)
Translates to: KAGKCARSRIASQPP*PCHTLLVYLCLKLN
Trigger: GTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCTGGCACACTTCCCTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 90 bp AGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCCAGGCACATaGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACGGTATCAC +
Preference number: 1 (lower is better)
Translates to: RRPTDKLARGRIPGT*FITSMREQQGARYH
Trigger: GTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 90 bp AATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTaGCACAACATCTGCTTCCCGAGGGCCCTGGAAGGCATTGCCCTG +
Preference number: 1 (lower is better)
Translates to: NPFRLELDQFSDLLS*HNICFPRALEGIAL
Trigger: CAGGGCAATGCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR CCA 90 bp AAAGACCCTGAGCCAGAACACCCGGCCAAGCTGTCCCCAGATTCCTaGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTG +
Preference number: 1 (lower is better)
Translates to: KDPEPEHPAKLSPDS*TSETLSLLGEITSL
Trigger: CAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGACAGCTTGGCCGGGTGTTCTGGCTCAGGGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 90 bp GCAAGGGGCACGGTATCACAGCCTGGAGACACCCACACAGATGGCTaGATCCGGTGCTACGGGAAACATTTTCCTAAGATGCCCATGAGA +
Preference number: 1 (lower is better)
Translates to: ARGTVSQPGDTHTDG*IRCYGKHFPKMPMR
Trigger: TCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTGCCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR TCA 90 bp CCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTaGCCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGA +
Preference number: 1 (lower is better)
Translates to: PLRPKSFPPGVGSIQ*PPLLPQHLLPEGPG
Trigger: TCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR GCA 90 bp AATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTaGCACAACATCTGCTTCCCGAGGGCCCTGGAAGGCATTGCCATT +
Preference number: 1 (lower is better)
Translates to: NPFRLELDQFSDLLS*HNICFPRALEGIAI
Trigger: AATGGCAATGCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461734.1
3UTR TCA 90 bp GACCATTGTGACATGACTTGCTTGTCCCTCGACAGAGCTCCACTTTaGTCAGACCACCTTCCCAAAGCAGCATGTTGCCCCATTCTGACC +
Preference number: 1 (lower is better)
Translates to: DHCDMTCLSLDRAPL*SDHLPKAACCPILT
Trigger: GGTCAGAATGGGGCAACATGCTGCTTTGGGAAGGTGGTCTGATCAAAGTGGAGCTCTGTCGAGGGACAAGCAAGTCATGTCACAATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR GCA 90 bp GTATACATCATTCTCTCTTGCTGTCTCCCTCACTCTTGGATCACTTaGTCTGGGAGAAGTCATATCCCAAGCGGCCCTATGGAGAGGCCC +
Preference number: 1 (lower is better)
Translates to: VYIILSCCLPHSWIT*SGRSHIPSGPMERP
Trigger: GGGCCTCTCCATAGGGCCGCTTGGGATATGACTTCTCCCAGAGCAAGTGATCCAAGAGTGAGGGAGACAGCAAGAGAGAATGATGTATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 90 bp ACGGTATCACAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTaGTACGGGAAACATTTTCCTAAGATGCCCATGAGAACAGACCAA +
Preference number: 1 (lower is better)
Translates to: TVSQPGDTHTDGWIR*YGKHFPKMPMRTDQ
Trigger: TTGGTCTGTTCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 90 bp AAGGTCTGCGGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTaGGAGGATAAGACTGCCTTTCCTACGCAAAAGAGCAATCTCCTC +
Preference number: 1 (lower is better)
Translates to: KVCGLYLFLSWRLNG*EDKTAFPTQKSNLL
Trigger: GAGGAGATTGCTCTTTTGCGTAGGAAAGGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR TCA 90 bp CCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTaGAGCTTAACTTCCCAAAGACTCAGATGCTCTAACTTAACTACA +
Preference number: 1 (lower is better)
Translates to: PSHPAHATPCWSTCV*SLTSQRLRCSNLTT
Trigger: TGTAGTTAAGTTAGAGCATCTGAGTCTTTGGGAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR TCA 90 bp CAAACTCAAAGGTCTGCGGGCTGTATCTCTTTCTCTCGTGGAGACTaGATGGGTGGGAGGATAAGACTGCCTTTCCTACGCAAAAGAGCA +
Preference number: 1 (lower is better)
Translates to: QTQRSAGCISFSRGD*MGGRIRLPFLRKRA
Trigger: TGCTCTTTTGCGTAGGAAAGGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR GCA 90 bp CTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTaGTTCCCGAGGGCCCTGGAAGGCATTGCCATTTTAAACAAGTTC +
Preference number: 1 (lower is better)
Translates to: LELDQFSDLLSCHNI*FPRALEGIAILNKF
Trigger: GAACTTGTTTAAAATGGCAATGCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461734.1
3UTR CCA 90 bp AGAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTaGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCC +
Preference number: 1 (lower is better)
Translates to: RAISSFKAEILSAWS*INSVTSSLATTSAS
Trigger: GGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR CCA 90 bp CGCAAAAGAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTaGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCT +
Preference number: 1 (lower is better)
Translates to: RKRAISSFKAEILSA*SWINSVTSSLATTS
Trigger: AGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTCTTTTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR TCA 90 bp TTCACCCTCATACAGCATTATCTGGTTAATGGGACCATTGTGACATaGCTTGCTTGTCCCTCGACAGAGCTCCACTTTGATCAGACCACC +
Preference number: 1 (lower is better)
Translates to: FTLIQHYLVNGTIVT*LACPSTELHFDQTT
Trigger: GGTGGTCTGATCAAAGTGGAGCTCTGTCGAGGGACAAGCAAGTCATGTCACAATGGTCCCATTAACCAGATAATGCTGTATGAGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR CCA 90 bp AAAATAGCAAACTCAAAGGTCTGCGGGCTGTATCTCTTTCTCTCGTaGAGACTGAATGGGTGGGAGGATAAGACTGCCTTTCCTACGCAA +
Preference number: 1 (lower is better)
Translates to: KIANSKVCGLYLFLS*RLNGWEDKTAFPTQ
Trigger: TTGCGTAGGAAAGGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGCTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR CCA 90 bp TCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTaGTTATTTTCCTGCTTTCTGCCAACCCAAAGCAAACTGCTCTGC +
Preference number: 1 (lower is better)
Translates to: SELRSLQKLWAIQEG*LFSCFLPTQSKLLC
Trigger: GCAGAGCAGTTTGCTTTGGGTTGGCAGAAAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
3UTR TCA 90 bp TTATCCCGATTAGCTTTCCTCTCAGTTGAAATGCACAGCAAGTCCTaGTGTGGCTCTTCTGTAGACTGTAGGTCCATTCTTGCTGCAATC +
Preference number: 1 (lower is better)
Translates to: LSRLAFLSVEMHSKS*CGSSVDCRSILAAI
Trigger: GATTGCAGCAAGAATGGACCTACAGTCTACAGAAGAGCCACATCAGGACTTGCTGTGCATTTCAACTGAGAGGAAAGCTAATCGGGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR TCA 90 bp AGTGCATCCTCTGCTGGCCAAAATAAGTATAGCACCTGCTATTCCTaGCTTCTGCATCCTTTTTCCATCAAGCTCAACGTCAGAGAGAAC +
Preference number: 1 (lower is better)
Translates to: SASSAGQNKYSTCYS*LLHPFSIKLNVREN
Trigger: GTTCTCTCTGACGTTGAGCTTGATGGAAAAAGGATGCAGAAGTCAGGAATAGCAGGTGCTATACTTATTTTGGCCAGCAGAGGATGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 90 bp AGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTaGTTTCTGCCAACCCAAAGCAAACTGCTCTGCCATGTCTGTTTG +
Preference number: 1 (lower is better)
Translates to: SLQKLWAIQEGWLFS*FLPTQSKLLCHVCL
Trigger: CAAACAGACATGGCAGAGCAGTTTGCTTTGGGTTGGCAGAAAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
3UTR GCA 90 bp TCAGAAATCTTGTATGGGTTTGAGAAAATAGCAAACTCAAAGGTCTaGGGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGGGAG +
Preference number: 1 (lower is better)
Translates to: SEILYGFEKIANSKV*GLYLFLSWRLNGWE
Trigger: CTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGCTATTTTCTCAAACCCATACAAGATTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR GCA 90 bp TCTATATCAGTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTaGAGCTTGAGACCGGTGAACGTAAAAGCCATTTCCCAGAACCTC +
Preference number: 1 (lower is better)
Translates to: SISVVIVLPNRPSDP*SLRPVNVKAISQNL
Trigger: GAGGTTCTGGGAAATGGCTTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTACTGATATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489938.2
3UTR TCA 90 bp CTTCTACATTTATGCAATGTTCCTTTCTTCACCCGCCCTTCTCAGTaGCCAGCTTATCCTGGAACAGCCTCAATGAGTAGCTCGTTAATA +
Preference number: 1 (lower is better)
Translates to: LLHLCNVPFFTRPSQ*PAYPGTASMSSSLI
Trigger: TATTAACGAGCTACTCATTGAGGCTGTTCCAGGATAAGCTGGTCACTGAGAAGGGCGGGTGAAGAAAGGAACATTGCATAAATGTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR TCA 90 bp ATAACTTCACCCTCATACAGCATTATCTGGTTAATGGGACCATTGTaGCATGACTTGCTTGTCCCTCGACAGAGCTCCACTTTGATCAGA +
Preference number: 1 (lower is better)
Translates to: ITSPSYSIIWLMGPL*HDLLVPRQSSTLIR
Trigger: TCTGATCAAAGTGGAGCTCTGTCGAGGGACAAGCAAGTCATGTCACAATGGTCCCATTAACCAGATAATGCTGTATGAGGGTGAAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR GCA 90 bp CCTCTGCTGGCCAAAATAAGTATAGCACCTGCTATTCCTGACTTCTaGATCCTTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGT +
Preference number: 1 (lower is better)
Translates to: PLLAKISIAPAIPDF*ILFPSSSTSERTSC
Trigger: ACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAAGGATGCAGAAGTCAGGAATAGCAGGTGCTATACTTATTTTGGCCAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 90 bp TCTATATCAGTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTaGAGCTTGAGACCGGTGAACGTAAAAGCCATTTCCCAGAACTTG +
Preference number: 1 (lower is better)
Translates to: SISVVIVLPNRPSDP*SLRPVNVKAISQNL
Trigger: CAAGTTCTGGGAAATGGCTTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTACTGATATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR CCA 90 bp AATAGTGACGCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTaGCTCTTGTATACATCATTCTCTCTTGCTGTCTCCCTCACTCTT +
Preference number: 1 (lower is better)
Translates to: NSDAMSLLSLGCKRL*LLYTSFSLAVSLTL
Trigger: AAGAGTGAGGGAGACAGCAAGAGAGAATGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGCGTCACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR TCA 90 bp TCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATaGACAATTGACCCACAAGTAACTCAGTGTAGGCTGATTTTTGGC +
Preference number: 1 (lower is better)
Translates to: SSVILWMTVQKSQVI*TIDPQVTQCRLIFG
Trigger: GCCAAAAATCAGCCTACACTGAGTTACTTGTGGGTCAATTGTTCATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 90 bp CCTAGCATTCTCGATACTGTAGGCTTTGGGATCTTCAATGTCTTCTaGAATTGGCTCTGTTTCAATTCCAAACAAAGAAACCCAGAACTT +
Preference number: 1 (lower is better)
Translates to: PSILDTVGFGIFNVF*NWLCFNSKQRNPEL
Trigger: AAGTTCTGGGTTTCTTTGTTTGGAATTGAAACAGAGCCAATTCCAGAAGACATTGAAGATCCCAAAGCCTACAGTATCGAGAATGCTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR TCA 90 bp TCACTTCCCTTCTTTCCAAAGATACACCAACATTGCCAGAGTAGTTaGCTCACTAGTTTAAAATCAACATTTACTTACTGTTGTCCAACC +
Preference number: 1 (lower is better)
Translates to: SLPFFPKIHQHCQSS*LTSLKSTFTYCCPT
Trigger: GGTTGGACAACAGTAAGTAAATGTTGATTTTAAACTAGTGAGTCAACTACTCTGGCAATGTTGGTGTATCTTTGGAAAGAAGGGAAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR TCA 90 bp AAAGTAATAAGATTGTTGGAGGTGATGAGGAGACAGAACTTCCAGTaGGTTATGTCAGAAATCTTGTATGGGTTTGAGAAAATAGCAAAC +
Preference number: 1 (lower is better)
Translates to: KVIRLLEVMRRQNFQ*VMSEILYGFEKIAN
Trigger: GTTTGCTATTTTCTCAAACCCATACAAGATTTCTGACATAACTCACTGGAAGTTCTGTCTCCTCATCACCTCCAACAATCTTATTACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
3UTR GCA 90 bp TGTGTTGAAGACCAAATATTTTCTCCAAAATACTGTTTAGCTAAGTaGTGTGCCACACATGGACATATGGTGCATAATAAATTCACTTCC +
Preference number: 1 (lower is better)
Translates to: CVEDQIFSPKYCLAK*CATHGHMVHNKFTS
Trigger: GGAAGTGAATTTATTATGCACCATATGTCCATGTGTGGCACAGCACTTAGCTAAACAGTATTTTGGAGAAAATATTTGGTCTTCAACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 90 bp GTTTCTTCTTTTCAATACACAAATCATTCATCTGATAAAGCTTTCTaGTGTGTTCTTTTGTCTTCATCATCAGTTCCCATCGCATTTGAG +
Preference number: 1 (lower is better)
Translates to: VSSFQYTNHSSDKAF*CVLLSSSSVPIAFE
Trigger: CTCAAATGCGATGGGAACTGATGATGAAGACAAAAGAACACACCAGAAAGCTTTATCAGATGAATGATTTGTGTATTGAAAAGAAGAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR GCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCGCTGCTTCTTGTGGCTaGCAGCTCCCACGAAGGCCC +
Preference number: 2 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPAASCG*QLPRRP
Trigger: GGGCCTTCGTGGGAGCTGGCAGCCACAAGAAGCAGC...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGCAGACCTCCCTAAGCTaGGGAGCCCGCTGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGQTSLS*GARCGG
Trigger: CCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTG...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGCCTTACCCTCAGAGGTaGGGCTGCTCCTCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGPYPQR*GCSSGS
Trigger: GCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGG...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCCTGTCCCCAGATTCCTaGACCTCAGAAACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPLSPDS*TSETLS
Trigger: TGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGACAG...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGGGCAGCTGCTTCTTGTaGCTGCCAGCTCCCACGAAG +
Preference number: 2 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGGSCFL*LPAPTK
Trigger: CTTCGTGGGAGCTGGCAGCCACAAGAAGCAGCTGCC...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR GCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCGGCTGGTTATTTTCCTaGTTTCTGCCAACCCAAAGC +
Preference number: 2 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPGWLFS*FLPTQS
Trigger: GCTTTGGGTTGGCAGAAAGCAGGAAAATAACCAGCC...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGCTCCACTCAGAACTaGGGAGTCTACAAAAACTGT +
Preference number: 2 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPCSTQN*GVYKNC
Trigger: ACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCA...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCACGGTATCACAGCCTaGAGACACCCACACAGATGG +
Preference number: 2 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIHGITA*RHPHRW
Trigger: CCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTG...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCAGCCTGGAATCAAGTTaGAATGAACCTAAAGCTATC +
Preference number: 2 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPSLESS*NEPKAI
Trigger: GATAGCTTTAGGTTCATTTCAACTTGATTCCAGGCT...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAGGTTCATCACGAGCATaGGGGAACAGCAAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: GRIPGTWFITSMREQQGAGSSRA*GNSKGH
Trigger: GTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACC...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp GGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCACTCTCTCCAGGCAGCAGCCAAGCTTCAGATaGCTGCAGCCCCAGCTCCTA +
Preference number: 2 (lower is better)
Translates to: GMVSPQDLSQRPATLSRQQPSFR*LQPQLL
Trigger: TAGGAGCTGGGGCTGCAGCCATCTGAAGCTTGGCTG...CTGCCTGGAGAGAGTGGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTTCCCAAGCGGCCCTATaGAGAGGCCCACATGGCGAG +
Preference number: 2 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSSQAAL*RGPHGE
Trigger: CTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGA...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAACCCGCCCTTCTCAGTaGCCAGCTTATCCTGGAACA +
Preference number: 2 (lower is better)
Translates to: GRIPGTWFITSMREQQGATRPSQ*PAYPGT
Trigger: TGTTCCAGGATAAGCTGGTCACTGAGAAGGGCGGGT...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCGCAACTCCTTTACTCTaGAGTTGTGACAGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIATPLL*SCDRGA
Trigger: AGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGC...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR GCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAGGCCCTGGAAGGCATTaGCCTGCTGATTCTGTAGTG +
Preference number: 2 (lower is better)
Translates to: GRIPGTWFITSMREQQGAGPGRH*PADSVV
Trigger: CACTACAGAATCAGCAGGGCAATGCCTTCCAGGGCC...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR CCA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCCTTTCCGCCTGGAGTTaGATCAATTCAGTGACCTCC +
Preference number: 2 (lower is better)
Translates to: ISQAALWRGPHGEELKPCLSAWS*INSVTS
Trigger: GGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAG...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR CAA 90 bp CATGGCGAGGAACTGAAGCCCTGCCTAATGGCCAAGGGAGTGAATTaGCTAATAGCCCCTCCAGCTCCAGCCAAGCTTCAGATGGCTGCA +
Preference number: 2 (lower is better)
Translates to: HGEELKPCLMAKGVN*LIAPPAPAKLQMAA
Trigger: TGCAGCCATCTGAAGCTTGGCTGGAGCTGGAGGGGCTATTAGCAAATTCACTCCCTTGGCCATTAGGCAGGGCTTCAGTTCCTCGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACGTATTTCCTGAATCCTaGGCCCTCAAAACACTGCTT +
Preference number: 2 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYVFPES*ALKTLL
Trigger: AAGCAGTGTTTTGAGGGCTCAGGATTCAGGAAATAC...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCAGCCATGAACTTCAATaGGCACTTACCCCCAAACCA +
Preference number: 2 (lower is better)
Translates to: SGRRGCRRPTDKLARGRISHELQ*ALTPKP
Trigger: TGGTTTGGGGGTAAGTGCTCATTGAAGTTCATGGCT...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACCCCAAACATGCGGAATaGAGCCCTGAATATTGTAGA +
Preference number: 2 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYPKHAE*SPEYCR
Trigger: TCTACAATATTCAGGGCTTCATTCCGCATGTTTGGG...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR GCA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCGGCTGGTTATTTTCCTaGTTTCTGCCAACCCAAAGC +
Preference number: 2 (lower is better)
Translates to: ISQAALWRGPHGEELKPCGWLFS*FLPTQS
Trigger: GCTTTGGGTTGGCAGAAAGCAGGAAAATAACCAGCC...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCTCCCAAGCGGCCCTATaGAGAGGCCCACATGGCGAG +
Preference number: 2 (lower is better)
Translates to: STITKGMVSPQDLSQRPASQAAL*RGPHGE
Trigger: CTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGA...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGGAAAACTTAGAATTCTaGCGGAGTTGCAGAAATCTT +
Preference number: 2 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGENLEF*RSCRNL
Trigger: AAGATTTCTGCAACTCCGTCAGAATTCTAAGTTTTC...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAACGCTATGTCACTTCTaGGCTTGGGCTGTAAAAGAC +
Preference number: 2 (lower is better)
Translates to: GRIPGTWFITSMREQQGATLCHF*AWAVKD
Trigger: GTCTTTTACAGCCCAAGCTCAGAAGTGACATAGCGT...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCAGACAGAACTTCCAGTaGGTTATGTCAGAAATCTTG +
Preference number: 2 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIRQNFQ*VMSEIL
Trigger: CAAGATTTCTGACATAACTCACTGGAAGTTCTGTCT...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCCAGGCTAATCACAGGTaGGGAAGACTTGGCATTGCT +
Preference number: 2 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFQANHR*GRLGIA
Trigger: AGCAATGCCAAGTCTTCCTCACCTGTGATTAGCCTG...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCTTCTCTCGTGGAGACTaGATGGGTGGGAGGATAAGA +
Preference number: 2 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFFSRGD*MGGRIR
Trigger: TCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAA...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR GCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCAAAGCAAACTGCTCTaGCATGTCTGTTTGTATTTC +
Preference number: 2 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIQSKLL*HVCLYF
Trigger: GAAATACAAACAGACATGGCAGAGCAGTTTGCTTTG...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR GCA 90 bp GTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGGTGCGACCTAGTGATCCCTaGAGCTTGAGACCGGTGAAC +
Preference number: 2 (lower is better)
Translates to: VVIVLPNRPSDPCSLRPVRPSDP*SLRPVN
Trigger: GTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCG...CACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488854.6
ENST00000489938.2
3UTR-3UTR CCA 90 bp ATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTCAGCCAAGCTTCAGATaGCTGCAGCCCCAGCTCCTA +
Preference number: 2 (lower is better)
Translates to: IPGPQKPSHSWVRSQVCCQPSFR*LQPQLL
Trigger: TAGGAGCTGGGGCTGCAGCCATCTGAAGCTTGGCTG...ACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 90 bp TGTATACATCATTCTCTCTTGCTGTCTCCCTCACTCTTGGATCACTaGCTCTGGGAGAAGTCATATCCCAAGCGGCCCTATGGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: CIHHSLLLSPSLLDH*LWEKSYPKRPYGEA
Trigger: GGCCTCTCCATAGGGCCGCTTGGGATATGACTTCTCCCAGAGCAAGTGATCCAAGAGTGAGGGAGACAGCAAGAGAGAATGATGTATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCATTTCATAACAGAGGTTaGGTGCTGCAGTCAGTTCTA +
Preference number: 2 (lower is better)
Translates to: GRIPGTWFITSMREQQGAFHNRG*VLQSVL
Trigger: TAGAACTGACTGCAGCACCCAACCTCTGTTATGAAA...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAGAGAGATTCTTAAAGTaGCTTAACGTGACTGGATCT +
Preference number: 2 (lower is better)
Translates to: GRIPGTWFITSMREQQGAERFLK*LNVTGS
Trigger: AGATCCAGTCACGTTAAGTCACTTTAAGAATCTCTC...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAGATTCCAAATGTCAGTaGGATTATCCTGCAATGGTT +
Preference number: 2 (lower is better)
Translates to: GRIPGTWFITSMREQQGADSKCQ*DYPAMV
Trigger: AACCATTGCAGGATAATCTCACTGACATTTGGAATC...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GCTCCTAGTGTGACTGCAACTCCACGAAAGACCCTGAGCCAGAACACCCGGCCATCTCCAGTAGAGAAGTaGCTACATCAGAAATTAATG +
Preference number: 2 (lower is better)
Translates to: APSVTATPRKTLSQNTRPSPVEK*LHQKLM
Trigger: CATTAATTTCTGATGTAGTCACTTCTCTACTGGAGA...TGGCCGGGTGTTCTGGCTCAGGGTCTTTCGTGGAGTTGCAGTCACACTAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACAGGTCCATCAGAAATaGGATCTGAAAAAGGTAGTA +
Preference number: 2 (lower is better)
Translates to: GRIPGTWFITSMREQQGAQVHQK*DLKKVV
Trigger: TACTACCTTTTTCAGATCTCATTTCTGATGGACCTG...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR GCA 90 bp CAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGGAACCTCTTGCCACAACATCTaGTTCCCGAGGGCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: QLCLDSCRTHYRLVHKGTSCHNI*FPRALE
Trigger: TTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGA...GGTTCCCTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR CCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTAGTCTACAAAAACTGTaGGCAATCCAAGAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSSLQKL*AIQEGW
Trigger: CCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACT...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACTTGAAAGGCACACATaGCTTAGGATATACAACACA +
Preference number: 2 (lower is better)
Translates to: GRIPGTWFITSMREQQGALERHT*LRIYNT
Trigger: TGTGTTGTATATCCTAAGCCATGTGTGCCTTTCAAG...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTCTGGGGAGCCCGCTGTaGTGGGACAGGCTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRLGSPL*WDRLAG
Trigger: GCCAGCCAGCCTGTCCCACCACAGCGGGCTCCCCAG...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCCACACATGGACATATaGTGCATAATAAATTCACTT +
Preference number: 2 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIPHMDI*CIINSL
Trigger: AAGTGAATTTATTATGCACCATATGTCCATGTGTGG...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp GGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGGGAGGATAAGACTGCCGAAATCCTTTCCGCCTaGAGTTGGATCAATTCAGTG +
Preference number: 2 (lower is better)
Translates to: GLYLFLSWRLNGWEDKTAEILSA*SWINSV
Trigger: CACTGAATTGATCCAACTCCAGGCGGAAAGGATTTC...GGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR CAA 90 bp TGTGGCTCTTGTATACATCATTCTCTCTTGCTGTCTCCCTCACTCTaGGATCACTTGCTCTGGGAGAAGTCATATCCCAAGCGGCCCTAT +
Preference number: 2 (lower is better)
Translates to: CGSCIHHSLLLSPSL*DHLLWEKSYPKRPY
Trigger: ATAGGGCCGCTTGGGATATGACTTCTCCCAGAGCAAGTGATCCAAGAGTGAGGGAGACAGCAAGAGAGAATGATGTATACAAGAGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCACTCTCTCCAGGCAGTCTCCAGTAGAGAAGTaGCTACATCAGAAATTAATG +
Preference number: 2 (lower is better)
Translates to: GMVSPQDLSQRPATLSRQSPVEK*LHQKLM
Trigger: CATTAATTTCTGATGTAGTCACTTCTCTACTGGAGA...CTGCCTGGAGAGAGTGGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAAGTTATATGAACAATTaGCCCACAAGTAACTCAGTG +
Preference number: 2 (lower is better)
Translates to: GRIPGTWFITSMREQQGASYMNN*PTSNSV
Trigger: CACTGAGTTACTTGTGGGTCAATTGTTCATATAACT...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp AAACTCAAAGGTCTGCGGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGAGTTCCCATCGCATTTaGGCAATCTTTTCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: KLKGLRAVSLSLVETEWVSSHRI*AIFSSH
Trigger: GTGGGAGGAAAAGATTGCTCAAATGCGATGGGAACT...CACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR GCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCAAACTCAAAGGTCTaGGGGCTGTATCTCTTTCTC +
Preference number: 2 (lower is better)
Translates to: KAEILSAWSWINSVTSSLANSKV*GLYLFL
Trigger: GAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGC...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR CCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTTGGAGACTGAATGGGTaGGAGGATAAGACTGCCTTT +
Preference number: 2 (lower is better)
Translates to: KAEILSAWSWINSVTSSLWRLNG*EDKTAF
Trigger: AAAGGCAGTCTTATCCTCCCACCCATTCAGTCTCCA...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR CAA 90 bp GCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCATTCTCTCTaGCTGTCTCCCTCACTCTTGGATCACTTGCTCTGGGAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: AWAVKDCGSCIHHSL*LSPSLLDHLLWEKS
Trigger: TGACTTCTCCCAGAGCAAGTGATCCAAGAGTGAGGGAGACAGCAAGAGAGAATGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 90 bp TCAGTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTaGAGACCGGTGAACGTAAAAGCCATTTCCCAGAACCTCGAAGGA +
Preference number: 2 (lower is better)
Translates to: SVVIVLPNRPSDPCS*RPVNVKAISQNLEG
Trigger: TCCTTCGAGGTTCTGGGAAATGGCTTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489938.2
3UTR-3UTR TCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTAAGGCATTGCCCTGCTaGTTCTGTAGTGTATTCAAC +
Preference number: 2 (lower is better)
Translates to: KAEILSAWSWINSVTSSLKALPC*FCSVFN
Trigger: GTTGAATACACTACAGAATCAGCAGGGCAATGCCTT...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR CCA 90 bp CCTAGTGATCCCTGCAGCTTGAGACCGGTGAACGTAAAAGCCATTTCCCAGAACTCGAAGGACTCTGTATaGTCTCAGAGAAGGATATTC +
Preference number: 2 (lower is better)
Translates to: PSDPCSLRPVNVKAISQNSKDSV*SQRRIF
Trigger: GAATATCCTTCTCTGAGACCATACAGAGTCCTTCGA...GTTCTGGGAAATGGCTTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488854.6
ENST00000489938.2
3UTR CAA 90 bp GACGCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTaGTATACATCATTCTCTCTTGCTGTCTCCCTCACTCTTGGATCA +
Preference number: 2 (lower is better)
Translates to: DAMSLLSLGCKRLWL*YTSFSLAVSLTLGS
Trigger: TGATCCAAGAGTGAGGGAGACAGCAAGAGAGAATGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 90 bp TCAGTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTaGAGACCGGTGAACGTAAAAGCCATTTCCCAGAACTTGATGTGG +
Preference number: 2 (lower is better)
Translates to: SVVIVLPNRPSDPCS*RPVNVKAISQNLMW
Trigger: CCACATCAAGTTCTGGGAAATGGCTTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR-3UTR TCA 90 bp TCCCCAGATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTCAAAACACTGCTTTATaGAGTCAACAATGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: SPDSWTSETLSLLGEITSQNTAL*SQQCQN
Trigger: GTTTTGGCATTGTTGACTTCATAAAGCAGTGTTTTG...ACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR GCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCTCAGTGAGATTATCCTaGAATGGTTATAGCCATGAA +
Preference number: 2 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFSVRLS*NGYSHE
Trigger: TTCATGGCTATAACCATTGCAGGATAATCTCACTGA...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR GCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGACGCTCTCAGTCATTaGTTTGCTATCCAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKDALSH*FAIQRP
Trigger: GGGCCTCTGGATAGCAAAGCAATGACTGAGAGCGTC...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTGTTGGATCAATTCAGTaGCCTCCTCTCTTGCCACAA +
Preference number: 2 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLVGSIQ*PPLLPQ
Trigger: TTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAAC...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR TCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTCCTTTCGAAGTTTTCTaGTCTTCAGTTCTTCAAGTG +
Preference number: 2 (lower is better)
Translates to: KAEILSAWSWINSVTSSLPFEVF*SSVLQV
Trigger: CACTTGAAGAACTGAAGATCAGAAAACTTCGAAAGG...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR GCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGTCTTGCCACAACATCTaGTTCCCGAGGGCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRSCHNI*FPRALE
Trigger: TTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGA...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR GCA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTTTGCTGATCATGAGCTaGCGGACTGTTTCCTCCATT +
Preference number: 2 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLLLIMS*RTVSSI
Trigger: AATGGAGGAAACAGTCCGGCAGCTCATGATCAGCAA...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR CCA 90 bp CAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGGAACCCAATTACCAAGGGGATaGTATCGCCTCAAGACCTTT +
Preference number: 2 (lower is better)
Translates to: QLCLDSCRTHYRLVHKGTQLPRG*YRLKTF
Trigger: AAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTG...GGTTCCCTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp CCATCTTCTCCCATCTCTGCTGCTAGCTTGTTCCTCCTTTCTTCCCTTATTTTCGATCTTTACTCCCTGTaGCTAGAATTTCCCCATCAC +
Preference number: 2 (lower is better)
Translates to: PSSPISAASLFLLSSLIFDLYSL*LEFPHH
Trigger: GTGATGGGGAAATTCTAGCCACAGGGAGTAAAGATC...GAAAATAAGGGAAGAAAGGAGGAACAAGCTAGCAGCAGAGATGGGAGAAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR-3UTR TCA 90 bp ATGGGTGGGAGGATAAGACTGCCTTTCCTACGCAAAAGAGCAATCTCCTCCTTTGAGAGATTCTTAAAGTaGCTTAACGTGACTGGATCT +
Preference number: 2 (lower is better)
Translates to: MGGRIRLPFLRKRAISSFERFLK*LNVTGS
Trigger: AGATCCAGTCACGTTAAGTCACTTTAAGAATCTCTC...AAAGGAGGAGATTGCTCTTTTGCGTAGGAAAGGCAGTCTTATCCTCCCACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR TCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTCCACTCAGAACTaGGGAGTCTACAAAAACTGT +
Preference number: 2 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSCSTQN*GVYKNC
Trigger: ACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCA...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR TCA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAATTAACAGAAAGCGTTTaGAGGGCTTCTAGATTTACC +
Preference number: 2 (lower is better)
Translates to: PLLHSELRSLQKLWAIQELTESV*RASRFT
Trigger: GGTAAATCTAGAAGCCCTTCAAACGCTTTCTGTTAA...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR GCA 90 bp ATGGGTGGGAGGATAAGACTGCCTTTCCTACGCAAAAGAGCAATCTCCTCCTTTTTACAGGTGATTTGCTaGAATCATGAAACACAGCCT +
Preference number: 2 (lower is better)
Translates to: MGGRIRLPFLRKRAISSFLQVIC*NHETQP
Trigger: AGGCTGTGTTTCATGATTGCAGCAAATCACCTGTAA...AAAGGAGGAGATTGCTCTTTTGCGTAGGAAAGGCAGTCTTATCCTCCCACCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR CCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCACAATTACCAAGGGGATaGTATCGCCTCAAGACCTTT +
Preference number: 2 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSQLPRG*YRLKTF
Trigger: AAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTG...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp ATCATAGATTCGAACAGAGCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTGAGTCAATAGCTCCAGAATaGAAGGAGAAGAGGCATTCT +
Preference number: 2 (lower is better)
Translates to: IIDSNRAVQGSCGHEISESIAPE*KEKRHS
Trigger: AGAATGCCTCTTCTCCTTCCATTCTGGAGCTATTGA...CTCACTTATCTCATGGCCACAACTGCCTTGGACTGCTCTGTTCGAATCTATGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465186.1
ENST00000488854.6
3UTR-3UTR CCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGTATCTCTTTCTCTCGTaGAGACTGAATGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKYLFLS*RLNGWE
Trigger: CTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATA...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR TCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGCCCAAACATGCGGAATaGAGCCCTGAATATTGTAGA +
Preference number: 2 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKPKHAE*SPEYCR
Trigger: TCTACAATATTCAGGGCTTCATTCCGCATGTTTGGG...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp CAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGGAACCTGGTCTACTTGTGTTTaGAGCTTAACTTCCCAAAGA +
Preference number: 2 (lower is better)
Translates to: QLCLDSCRTHYRLVHKGTWSTCV*SLTSQR
Trigger: TCTTTGGGAAGTTAAGCTTCAAACACAAGTAGACCA...GGTTCCCTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR GCA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCATATTACAGGTGATTTaGTGCAATCATGAAACACAG +
Preference number: 2 (lower is better)
Translates to: STITKGMVSPQDLSQRPAILQVI*CNHETQ
Trigger: CTGTGTTTCATGATTGCAGCAAATCACCTGTAATAT...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR GCA 90 bp CCATCTTCAAATCCTACAATAATTTGTGCTCCAGTGAAGTTTACCATTCGGGGTCATTGTGACATGACTTaGTTGTCCCTCGACAGAGCT +
Preference number: 2 (lower is better)
Translates to: PSSNPTIICAPVKFTIRGHCDMT*LSLDRA
Trigger: AGCTCTGTCGAGGGACAAGCAAGTCATGTCACAATG...ACCCCGAATGGTAAACTTCACTGGAGCACAAATTATTGTAGGATTTGAAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR-3UTR CCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCAATCAGAATCTCAGAATaGGAAGGAACCCATTCTACC +
Preference number: 2 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSIRISE*EGTHST
Trigger: GGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGAT...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp TCTCATGTGCTCAGGTATCTTGTAGTCTGGGGCTGTCTTCAGATTGAAATCTCCTGGCTTGAAGATCTTTaGGATCTTCATAGTCATCAC +
Preference number: 2 (lower is better)
Translates to: SHVLRYLVVWGCLQIEISWLEDL*DLHSHH
Trigger: GTGATGACTATGAAGATCCCAAAGATCTTCAAGCCA...GGAGATTTCAATCTGAAGACAGCCCCAGACTACAAGATACCTGAGCACATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490481.1
3UTR-3UTR TCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTCTCTCGTGGAGACTaGATGGGTGGGAGGATAAGA +
Preference number: 2 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLFSRGD*MGGRIR
Trigger: TCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAA...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR TCA 90 bp CCATCTTCAAATCCTACAATAATTTGTGCTCCAGTGAAGTTTACCATTCGGGGTTTAATGGGACCATTGTaGCATGACTTGCTTGTCCCT +
Preference number: 2 (lower is better)
Translates to: PSSNPTIICAPVKFTIRGLMGPL*HDLLVP
Trigger: AGGGACAAGCAAGTCATGTCACAATGGTCCCATTAA...ACCCCGAATGGTAAACTTCACTGGAGCACAAATTATTGTAGGATTTGAAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR-3UTR GCA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTTTACAGGTGATTTGCTaGAATCATGAAACACAGCCT +
Preference number: 2 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPLQVIC*NHETQP
Trigger: AGGCTGTGTTTCATGATTGCAGCAAATCACCTGTAA...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR GCA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGGCAAACTCAAAGGTCTaGGGGCTGTATCTCTTTCTC +
Preference number: 2 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMANSKV*GLYLFL
Trigger: GAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGC...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR CCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGTTTCATAACAGAGGTTaGGTGCTGCAGTCAGTTCTA +
Preference number: 2 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKFHNRG*VLQSVL
Trigger: TAGAACTGACTGCAGCACCCAACCTCTGTTATGAAA...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTGGCTGTAAAAGACTGTaGCTCTTGTATACATCATTC +
Preference number: 2 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGGCKRL*LLYTSF
Trigger: GAATGATGTATACAAGAGCCACAGTCTTTTACAGCC...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 90 bp CTTCAGATTGAAATCTCCCATATACACCTGGGCTTCTTTGATGGCTaGAAGATCTTTGGGATCTTCATAGTCATCACCAGGTTTACTCTT +
Preference number: 2 (lower is better)
Translates to: LQIEISHIHLGFFDG*KIFGIFIVITRFTL
Trigger: AAGAGTAAACCTGGTGATGACTATGAAGATCCCAAAGATCTTCAAGCCATCAAAGAAGCCCAGGTGTATATGGGAGATTTCAATCTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490481.1
3UTR-3UTR TCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGGATTTGCTGCAATCATaGAACACAGCCTTCCGAGAC +
Preference number: 2 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLDLLQS*NTAFRD
Trigger: GTCTCGGAAGGCTGTGTTTCATGATTGCAGCAAATC...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR TCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCACCTCTAAGAATATGCTaGTGTACAAAGAAAGCAAGA +
Preference number: 2 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSPLRIC*CTKKAR
Trigger: TCTTGCTTTCTTTGTACATCAGCATATTCTTAGAGG...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGGTTGGATCAATTCAGTaGCCTCCTCTCTTGCCACAA +
Preference number: 2 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLVGSIQ*PPLLPQ
Trigger: TTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAAC...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR TCA 90 bp AATCGTGAGCCCTTTTGGATCATAAAGTTCAAGAATTCGAACAACTCCATCTTCCAGTACCTCCTTGTTTaGATTTCATCTGGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: NREPFWIIKFKNSNNSIFQYLLV*ISSGPK
Trigger: CTTTGGCCCAGATGAAATTCAAACAAGGAGGTACTG...GAAGATGGAGTTGTTCGAATTCTTGAACTTTATGATCCAAAAGGGCTCACGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR-3UTR GCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCATCAGTGAGATTATCCTaGAATGGTTATAGCCATGAA +
Preference number: 2 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSSVRLS*NGYSHE
Trigger: TTCATGGCTATAACCATTGCAGGATAATCTCACTGA...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR GCA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGCACTCTTGGATCACTTaGTCTGGGAGAAGTCATATC +
Preference number: 2 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMHSWIT*SGRSHI
Trigger: GATATGACTTCTCCCAGAGCAAGTGATCCAAGAGTG...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTATCTCTTTCTCTCGTaGAGACTGAATGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLYLFLS*RLNGWE
Trigger: CTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATA...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR TCA 90 bp AATCAGAATCTCAGAATGGGAAGGAACCCATTCTACCAATCCTTCATTTGTCAGAGACAGAACTTCCAGTaGGTTATGTCAGAAATCTTG +
Preference number: 2 (lower is better)
Translates to: NQNLRMGRNPFYQSFICQRQNFQ*VMSEIL
Trigger: CAAGATTTCTGACATAACTCACTGGAAGTTCTGTCT...CTGACAAATGAAGGATTGGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGCAAAACACTGCTTTATaGAGTCAACAATGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLQNTAL*SQQCQN
Trigger: GTTTTGGCATTGTTGACTTCATAAAGCAGTGTTTTG...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp AATCAGAATCTCAGAATGGGAAGGAACCCATTCTACCAATCCTTCATTTGTCAGAAGACTTGGCATTGCTaGGTTCCCTTCTACATTTAT +
Preference number: 2 (lower is better)
Translates to: NQNLRMGRNPFYQSFICQKTWHC*VPFYIY
Trigger: ATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTT...CTGACAAATGAAGGATTGGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp TTTGATTTCATAGGAGACTACATCATGATCATCCTCTTCTTGCTTTATGGTTGGAAAGTACTTTCAGGATaGGACATGGGAGACCACATT +
Preference number: 2 (lower is better)
Translates to: FDFIGDYIMIILFLLYGWKVLSG*DMGDHI
Trigger: AATGTGGTCTCCCATGTCTCATCCTGAAAGTACTTT...CCAACCATAAAGCAAGAAGAGGATGATCATGATGTAGTCTCCTATGAAATCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR-3UTR GCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGTTACAGGTGATTTGCTaGAATCATGAAACACAGCCT +
Preference number: 2 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRLQVIC*NHETQP
Trigger: AGGCTGTGTTTCATGATTGCAGCAAATCACCTGTAA...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR GCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGATATTACAGGTGATTTaGTGCAATCATGAAACACAG +
Preference number: 2 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKILQVI*CNHETQ
Trigger: CTGTGTTTCATGATTGCAGCAAATCACCTGTAATAT...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTTCATAACAGAGGTTaGGTGCTGCAGTCAGTTCTA +
Preference number: 2 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLFHNRG*VLQSVL
Trigger: TAGAACTGACTGCAGCACCCAACCTCTGTTATGAAA...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR CCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTCTTTCTGCACAGCACTaGAATCATAGCACTCAATGG +
Preference number: 2 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRLSAQH*NHSTQW
Trigger: CCATTGAGTGCTATGATTCCAGTGCTGTGCAGAAAG...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 90 bp CATGTCTTTGATTTCATAGGAGACTACATCATGATCATCCTCTTCTaGCTTTATGGTTGGAAGTGGAGCTTCAAGAATATAGCCATTTTC +
Preference number: 2 (lower is better)
Translates to: HVFDFIGDYIMIILF*LYGWKWSFKNIAIF
Trigger: GAAAATGGCTATATTCTTGAAGCTCCACTTCCAACCATAAAGCAAGAAGAGGATGATCATGATGTAGTCTCCTATGAAATCAAAGACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR-3UTR TCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTAGCCTGGAATCAAGTTaGAATGAACCTAAAGCTATC +
Preference number: 2 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRSLESS*NEPKAI
Trigger: GATAGCTTTAGGTTCATTTCAACTTGATTCCAGGCT...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR TCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTGAAAACTTAGAATTCTaGCGGAGTTGCAGAAATCTT +
Preference number: 2 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRENLEF*RSCRNL
Trigger: AAGATTTCTGCAACTCCGTCAGAATTCTAAGTTTTC...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR TCA 72 bp GCTTCTTGTGGCTGCCAGCTCCCACGAAGGCCCCGGTaGCCCCCACCTGGCATTCACACCCTGTTCAGTCCC +
Preference number: 3 (lower is better)
Translates to: ASCGCQLPRRPR*PPPGIHTLFSP
Trigger: GGGACTGAACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCACAAGAAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 72 bp TGGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTGTaGTGGGACAGGCTGGCTGGCAGGCATGAGCAACTC +
Preference number: 3 (lower is better)
Translates to: WLTDLPKLGSPL*WDRLAGRHEQL
Trigger: GAGTTGCTCATGCCTGCCAGCCAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 72 bp TCCCTAAGCTGGGGAGCCCGCTGTGGTGGGACAGGCTaGCTGGCAGGCATGAGCAACTCCTTTACTCTGAAG +
Preference number: 3 (lower is better)
Translates to: SLSWGARCGGTG*LAGMSNSFTLK
Trigger: CTTCAGAGTAAAGGAGTTGCTCATGCCTGCCAGCCAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 72 bp GAGCCAGAACACCCGGCCAAGCTGTCCCCAGATTCCTaGACCTCAGAAACCCTCTCACTCCTGGGTGAGATC +
Preference number: 3 (lower is better)
Translates to: EPEHPAKLSPDS*TSETLSLLGEI
Trigger: GATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGACAGCTTGGCCGGGTGTTCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 72 bp GTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTaGCAAGAGGAAGGATCCCAGGCACATGGTTCATCA +
Preference number: 3 (lower is better)
Translates to: VAGEAAGGPQIS*QEEGSQAHGSS
Trigger: TGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR TCA 72 bp GAGGAAGGATCCCAGGCACATGGTTCATCACGAGCATaGGGGAACAGCAAGGGGCACGGTATCACAGCCTGG +
Preference number: 3 (lower is better)
Translates to: EEGSQAHGSSRA*GNSKGHGITAW
Trigger: CCAGGCTGTGATACCGTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 72 bp CGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTaGCACAACATCTGCTTCCCGAGGGCCCTGGAAGGC +
Preference number: 3 (lower is better)
Translates to: RLELDQFSDLLS*HNICFPRALEG
Trigger: GCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR GCA 72 bp GATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTaGTTCCCGAGGGCCCTGGAAGGCATTGCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: DQFSDLLSCHNI*FPRALEGIALL
Trigger: CAGCAGGGCAATGCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR-3UTR CAA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGCTTCCAATGCTGAGATaGATCATCGGTGATACTATG +
Preference number: 3 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGLPMLR*IIGDTM
Trigger: CATAGTATCACCGATGATCAATCTCAGCATTGGAAG...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp ACATGGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTGTGGTGGGACAGGCTGTTCTGGTGTGTTCTTTaGTCTTCATCATCAGTTCCC +
Preference number: 3 (lower is better)
Translates to: TWLTDLPKLGSPLWWDRLFWCVL*SSSSVP
Trigger: GGGAACTGATGATGAAGACAAAAGAACACACCAGAA...CAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR TCA 72 bp AGGTCTGCGGGCTGTATCTCTTTCTCTCGTGGAGACTaGATGGGTGGGAGGATAAGACTGCCTTTCCTACGC +
Preference number: 3 (lower is better)
Translates to: RSAGCISFSRGD*MGGRIRLPFLR
Trigger: GCGTAGGAAAGGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR TCA 72 bp GACATGACTTGCTTGTCCCTCGACAGAGCTCCACTTTaGTCAGACCACCTTCCCAAAGCAGCATGTTGCCCC +
Preference number: 3 (lower is better)
Translates to: DMTCLSLDRAPL*SDHLPKAACCP
Trigger: GGGGCAACATGCTGCTTTGGGAAGGTGGTCTGATCAAAGTGGAGCTCTGTCGAGGGACAAGCAAGTCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR GCA 72 bp CTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTaGCTAATGGCCAAGGGAGTGAATTTGCTAATAGCC +
Preference number: 3 (lower is better)
Translates to: LWRGPHGEELKP*LMAKGVNLLIA
Trigger: GGCTATTAGCAAATTCACTCCCTTGGCCATTAGGCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 72 bp CAGCCTGGAGACACCCACACAGATGGCTGGATCCGGTaGTACGGGAAACATTTTCCTAAGATGCCCATGAGA +
Preference number: 3 (lower is better)
Translates to: QPGDTHTDGWIR*YGKHFPKMPMR
Trigger: TCTCATGGGCATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 72 bp ACAGATAAGCTGGCAAGAGGAAGGATCCCAGGCACATaGTTCATCACGAGCATGAGGGAACAGCAAGGGGCA +
Preference number: 3 (lower is better)
Translates to: TDKLARGRIPGT*FITSMREQQGA
Trigger: TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCCTCTTGCCAGCTTATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp GGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCACTCTCTCCAGGCAGGAGGAAGACTTGGCATaGCTGAGTTCCCTTCTACAT +
Preference number: 3 (lower is better)
Translates to: GMVSPQDLSQRPATLSRQEEDLA*LSSLLH
Trigger: ATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTC...CTGCCTGGAGAGAGTGGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGAAAAGACTGTGGCTCTaGTATACATCATTCTCTCTT +
Preference number: 3 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGKRLWL*YTSFSL
Trigger: AAGAGAGAATGATGTATACAAGAGCCACAGTCTTTT...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCACTGTAGGTCCATTCTaGCTGCAATCAGAATCAGAA +
Preference number: 3 (lower is better)
Translates to: SGRRGCRRPTDKLARGRITVGPF*LQSESE
Trigger: TTCTGATTCTGATTGCAGCAAGAATGGACCTACAGT...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp GGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGGGAGGATAAGACTGCCCCTTTCCGCCTGGAGTaGGATCAATTCAGTGACCTC +
Preference number: 3 (lower is better)
Translates to: GLYLFLSWRLNGWEDKTAPFRLE*DQFSDL
Trigger: GAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGG...GGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR TCA 72 bp CCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTaGCCTCCTCTCTTGCCACAACATCTGCTTCCCGAG +
Preference number: 3 (lower is better)
Translates to: PKSFPPGVGSIQ*PPLLPQHLLPE
Trigger: CTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR CCA 72 bp ACGGTATCACAGCCTGGAGACACCCACACAGATGGCTaGATCCGGTGCTACGGGAAACATTTTCCTAAGATG +
Preference number: 3 (lower is better)
Translates to: TVSQPGDTHTDG*IRCYGKHFPKM
Trigger: CATCTTAGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCTTAGTCCAGCTCAGTTaGGGAATAATTATCCCGATT +
Preference number: 3 (lower is better)
Translates to: SGRRGCRRPTDKLARGRILVQLS*GIIIPI
Trigger: AATCGGGATAATTATTCCCAAACTGAGCTGGACTAA...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp GAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTACCACACGGCCAAACTaGCTGATCATGAGCTGCCGG +
Preference number: 3 (lower is better)
Translates to: EQSPPLRPKSFPPGVGSITTRPN*LIMSCR
Trigger: CCGGCAGCTCATGATCAGCAAGTTTGGCCGTGTGGT...AATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR GCA 72 bp ATTCTCTCTTGCTGTCTCCCTCACTCTTGGATCACTTaGTCTGGGAGAAGTCATATCCCAAGCGGCCCTATG +
Preference number: 3 (lower is better)
Translates to: ILSCCLPHSWIT*SGRSHIPSGPM
Trigger: CATAGGGCCGCTTGGGATATGACTTCTCCCAGAGCAAGTGATCCAAGAGTGAGGGAGACAGCAAGAGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 72 bp GATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTaGTTCCCGAGGGCCCTGGAAGGCATTGCCATTTTA +
Preference number: 3 (lower is better)
Translates to: DQFSDLLSCHNI*FPRALEGIAIL
Trigger: TAAAATGGCAATGCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461734.1
3UTR CCA 72 bp GCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTaGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCC +
Preference number: 3 (lower is better)
Translates to: AISSFKAEILSA*SWINSVTSSLA
Trigger: GGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR CCA 72 bp GGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTaGGAGGATAAGACTGCCTTTCCTACGCAAAAGAGC +
Preference number: 3 (lower is better)
Translates to: GLYLFLSWRLNG*EDKTAFPTQKS
Trigger: GCTCTTTTGCGTAGGAAAGGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR CAA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCACAGGTGAGGAAGACTaGGCATTGCTGAGTTCCCTT +
Preference number: 3 (lower is better)
Translates to: STITKGMVSPQDLSQRPATGEED*ALLSSL
Trigger: AAGGGAACTCAGCAATGCCAAGTCTTCCTCACCTGT...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp ATGGGTGGGAGGATAAGACTGCCTTTCCTACGCAAAAGAGCAATCTCCTCCTTTCCTTTCCGCCTGGAGTaGGATCAATTCAGTGACCTC +
Preference number: 3 (lower is better)
Translates to: MGGRIRLPFLRKRAISSFPFRLE*DQFSDL
Trigger: GAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGG...AAAGGAGGAGATTGCTCTTTTGCGTAGGAAAGGCAGTCTTATCCTCCCACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR TCA 72 bp CCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTaGAGCTTAACTTCCCAAAGACTCAGATGCTCTAAC +
Preference number: 3 (lower is better)
Translates to: PAHATPCWSTCV*SLTSQRLRCSN
Trigger: GTTAGAGCATCTGAGTCTTTGGGAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 72 bp CTCAATGGATTTAGCTCTAAAGAGAAATTTAGCACATaGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTG +
Preference number: 3 (lower is better)
Translates to: LNGFSSKEKFST*LTDLPKLGSPL
Trigger: CAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCATGTGCTAAATTTCTCTTTAGAGCTAAATCCATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CCA 72 bp TCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTaGATCAATTCAGTGACCTCCTCTCTTGCCACAACA +
Preference number: 3 (lower is better)
Translates to: SSFKAEILSAWS*INSVTSSLATT
Trigger: TGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR CCA 72 bp AACTCAAAGGTCTGCGGGCTGTATCTCTTTCTCTCGTaGAGACTGAATGGGTGGGAGGATAAGACTGCCTTT +
Preference number: 3 (lower is better)
Translates to: NSKVCGLYLFLS*RLNGWEDKTAF
Trigger: AAAGGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR CCA 72 bp AGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATaGAAGGAGAAGAGGCATTCTGGGTCCTGGGTAATA +
Preference number: 3 (lower is better)
Translates to: RGETATASIAPE*KEKRHSGSWVI
Trigger: TATTACCCAGGACCCAGAATGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR TCA 72 bp GAATTTGATAAACAGGGTCCTAGGGAAGAGTCACTCTaGCTGTTTAGGGCAAGTGCATCCTCTGCTGGCCAA +
Preference number: 3 (lower is better)
Translates to: EFDKQGPREESL*LFRASASSAGQ
Trigger: TTGGCCAGCAGAGGATGCACTTGCCCTAAACAGTCAGAGTGACTCTTCCCTAGGACCCTGTTTATCAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR TCA 72 bp CCCTCATACAGCATTATCTGGTTAATGGGACCATTGTaGCATGACTTGCTTGTCCCTCGACAGAGCTCCACT +
Preference number: 3 (lower is better)
Translates to: PSYSIIWLMGPL*HDLLVPRQSST
Trigger: AGTGGAGCTCTGTCGAGGGACAAGCAAGTCATGTCACAATGGTCCCATTAACCAGATAATGCTGTATGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR-3UTR CAA 90 bp CAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGGAACCACAGGTGAGGAAGACTaGGCATTGCTGAGTTCCCTT +
Preference number: 3 (lower is better)
Translates to: QLCLDSCRTHYRLVHKGTTGEED*ALLSSL
Trigger: AAGGGAACTCAGCAATGCCAAGTCTTCCTCACCTGT...GGTTCCCTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTCCAGGCAGCTGCTTCTaGTGGCTGCCAGCTCCCACG +
Preference number: 3 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRPGSCF*WLPAPT
Trigger: CGTGGGAGCTGGCAGCCACAAGAAGCAGCTGCCTGG...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 72 bp GTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTaGAGCTTGAGACCGGTGAACGTAAAAGCCATTTCC +
Preference number: 3 (lower is better)
Translates to: VVIVLPNRPSDP*SLRPVNVKAIS
Trigger: GGAAATGGCTTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488854.6
ENST00000489938.2
3UTR CCA 72 bp GTAACTTCTCCTGATTCTCTACAATTACCAAGGGGATaGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCA +
Preference number: 3 (lower is better)
Translates to: VTSPDSLQLPRG*YRLKTFLRDQP
Trigger: TGGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGAGAATCAGGAGAAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp TCTCATGTGCTCAGGTATCTTGTAGTCTGGGGCTGTCTTCAGATTGAAATCTCCGGCTTCTTTGATGGCTaGAAGATCTTTGGGATCTTC +
Preference number: 3 (lower is better)
Translates to: SHVLRYLVVWGCLQIEISGFFDG*KIFGIF
Trigger: GAAGATCCCAAAGATCTTCAAGCCATCAAAGAAGCC...GGAGATTTCAATCTGAAGACAGCCCCAGACTACAAGATACCTGAGCACATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490481.1
3UTR-3UTR CAA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTCAGTTCCCATCGCATTaGAGCAATCTTTTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPQFPSH*SNLFLP
Trigger: TGGGAGGAAAAGATTGCTCAAATGCGATGGGAACTG...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR CCA 72 bp CTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTaGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: LLHSELRSLQKL*AIQEGWLFSCF
Trigger: AAAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
3UTR CCA 72 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTaGCTCTTGTATACATCATTCTCTCTTGCTGTCTCC +
Preference number: 3 (lower is better)
Translates to: AMSLLSLGCKRL*LLYTSFSLAVS
Trigger: GGAGACAGCAAGAGAGAATGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp TACGCAAAAGAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTAAAGTAATAAGATTGTaGGAGGTGATGAGGAGACAG +
Preference number: 3 (lower is better)
Translates to: YAKEQSPPLRPKSFPPGVKVIRL*EVMRRQ
Trigger: CTGTCTCCTCATCACCTCCAACAATCTTATTACTTT...AACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTCTTTTGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR CAA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTATACATCATTCTCTCTaGCTGTCTCCCTCACTCTTG +
Preference number: 3 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGIHHSL*LSPSLL
Trigger: CAAGAGTGAGGGAGACAGCAAGAGAGAATGATGTAT...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR TCA 72 bp ATACAGCATTATCTGGTTAATGGGACCATTGTGACATaGCTTGCTTGTCCCTCGACAGAGCTCCACTTTGAT +
Preference number: 3 (lower is better)
Translates to: IQHYLVNGTIVT*LACPSTELHFD
Trigger: ATCAAAGTGGAGCTCTGTCGAGGGACAAGCAAGTCATGTCACAATGGTCCCATTAACCAGATAATGCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR-3UTR CAA 90 bp CCATCTTCAAATCCTACAATAATTTGTGCTCCAGTGAAGTTTACCATTCGGGGTAAGGGCAGTACCTCCTaGTTTGAATTTCATCTGGGC +
Preference number: 3 (lower is better)
Translates to: PSSNPTIICAPVKFTIRGKGSTS*FEFHLG
Trigger: GCCCAGATGAAATTCAAACAAGGAGGTACTGCCCTT...ACCCCGAATGGTAAACTTCACTGGAGCACAAATTATTGTAGGATTTGAAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR TCA 72 bp TTGGGAATAATTATCCCGATTAGCTTTCCTCTCAGTTaGAATGCACAGCAAGTCCTGATGTGGCTCTTCTGT +
Preference number: 3 (lower is better)
Translates to: LGIIIPISFPLS*NAQQVLMWLFC
Trigger: ACAGAAGAGCCACATCAGGACTTGCTGTGCATTTCAACTGAGAGGAAAGCTAATCGGGATAATTATTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 72 bp GCCAAAATAAGTATAGCACCTGCTATTCCTGACTTCTaGATCCTTTTTCCATCAAGCTCAACGTCAGAGAGA +
Preference number: 3 (lower is better)
Translates to: AKISIAPAIPDF*ILFPSSSTSER
Trigger: TCTCTCTGACGTTGAGCTTGATGGAAAAAGGATGCAGAAGTCAGGAATAGCAGGTGCTATACTTATTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 72 bp TTGTATGGGTTTGAGAAAATAGCAAACTCAAAGGTCTaGGGGCTGTATCTCTTTCTCTCGTGGAGACTGAAT +
Preference number: 3 (lower is better)
Translates to: LYGFEKIANSKV*GLYLFLSWRLN
Trigger: ATTCAGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGCTATTTTCTCAAACCCATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR CAA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCAAAGTAATAAGATTGTaGGAGGTGATGAGGAGACAG +
Preference number: 3 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSKVIRL*EVMRRQ
Trigger: CTGTCTCCTCATCACCTCCAACAATCTTATTACTTT...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR CAA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTAAAGTAATAAGATTGTaGGAGGTGATGAGGAGACAG +
Preference number: 3 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLKVIRL*EVMRRQ
Trigger: CTGTCTCCTCATCACCTCCAACAATCTTATTACTTT...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
3UTR-3UTR CAA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGGAGGAAGACTTGGCATaGCTGAGTTCCCTTCTACAT +
Preference number: 3 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMEEDLA*LSSLLH
Trigger: ATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTC...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR GCA 72 bp CAGAACTTGATGTGGCCTGATCCCGATGTAGTAAGCTaGTCTTCCTTATCAGGATTGAAAGTAACCTTAAAA +
Preference number: 3 (lower is better)
Translates to: QNLMWPDPDVVS*SSLSGLKVTLK
Trigger: TTTTAAGGTTACTTTCAATCCTGATAAGGAAGAGCAGCTTACTACATCGGGATCAGGCCACATCAAGTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR CCA 72 bp TCCATTCTTGCTGCAATCAGAATCAGAATCTCAGAATaGGAAGGAACCCATTCTACCAATCCTTCATTTGTC +
Preference number: 3 (lower is better)
Translates to: SILAAIRIRISE*EGTHSTNPSFV
Trigger: GACAAATGAAGGATTGGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGATTCTGATTGCAGCAAGAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR-3UTR CAA 90 bp AATCAGAATCTCAGAATGGGAAGGAACCCATTCTACCAATCCTTCATTTGTCAGCTGGTCTACTTGTGTTaGAAGCTTAACTTCCCAAAG +
Preference number: 3 (lower is better)
Translates to: NQNLRMGRNPFYQSFICQLVYLC*KLNFPK
Trigger: CTTTGGGAAGTTAAGCTTCAAACACAAGTAGACCAG...CTGACAAATGAAGGATTGGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR TCA 72 bp AGATTGTTGGAGGTGATGAGGAGACAGAACTTCCAGTaGGTTATGTCAGAAATCTTGTATGGGTTTGAGAAA +
Preference number: 3 (lower is better)
Translates to: RLLEVMRRQNFQ*VMSEILYGFEK
Trigger: TTTCTCAAACCCATACAAGATTTCTGACATAACTCACTGGAAGTTCTGTCTCCTCATCACCTCCAACAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
3UTR TCA 72 bp TATTGTCTCAAAATCCCATATCCTAACATATCCATCTaGCCCAACAGTGATAACTTCACCCTCATACAGCAT +
Preference number: 3 (lower is better)
Translates to: YCLKIPYPNISI*PNSDNFTLIQH
Trigger: ATGCTGTATGAGGGTGAAGTTATCACTGTTGGGTCAGATGGATATGTTAGGATATGGGATTTTGAGACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR CCA 72 bp GACTACATCATGATCATCCTCTTCTTGCTTTATGGTTaGAAGTGGAGCTTCAAGAATATAGCCATTTTCACA +
Preference number: 3 (lower is better)
Translates to: DYIMIILFLLYG*KWSFKNIAIFT
Trigger: TGTGAAAATGGCTATATTCTTGAAGCTCCACTTCCAACCATAAAGCAAGAAGAGGATGATCATGATGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR CCA 72 bp AGGAGACTACATCATGATCATCCTCTTCTTGCTTTATaGTTGGAAGTGGAGCTTCAAGAATATAGCCATTTT +
Preference number: 3 (lower is better)
Translates to: RRLHHDHPLLAL*LEVELQEYSHF
Trigger: AAAATGGCTATATTCTTGAAGCTCCACTTCCAACCATAAAGCAAGAAGAGGATGATCATGATGTAGTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR-3UTR CAA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGAAAAGACTGTGGCTCTaGTATACATCATTCTCTCTT +
Preference number: 3 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMKRLWL*YTSFSL
Trigger: AAGAGAGAATGATGTATACAAGAGCCACAGTCTTTT...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCGAGGAATCCTCCAACTaGGCCTCCAGACCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPEESSN*ASRPCL
Trigger: CAGACAGGGTCTGGAGGCCCAGTTGGAGGATTCCTC...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp ACATGGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTGTGGTGGGACAGGCTGCAGCCACCCTGCCCATaGCACACCCTGCTGGTCTAC +
Preference number: 4 (lower is better)
Translates to: TWLTDLPKLGSPLWWDRLQPPCP*HTLLVY
Trigger: GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTG...CAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCCACGGTATCACAGCCTaGAGACACCCACACAGATGG +
Preference number: 4 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPHGITA*RHPHRW
Trigger: CCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTG...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACTGGGGAGCCCGCTGTaGTGGGACAGGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRIPGTWFITSMREQQGALGSPL*WDRLAG
Trigger: GCCAGCCAGCCTGTCCCACCACAGCGGGCTCCCCAG...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCAGGATCCCAGGCACATaGTTCATCACGAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPRIPGT*FITSMR
Trigger: CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCT...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCAAAATCCACAGAGGATaGGAGAGGGGGTTGACGGAA +
Preference number: 4 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPKIHRG*ERGLTE
Trigger: TTCCGTCAACCCCCTCTCCCATCCTCTGTGGATTTT...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGCAGCCAAGCTTCAGATaGCTGCAGCCCCAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGQPSFR*LQPQLL
Trigger: TAGGAGCTGGGGCTGCAGCCATCTGAAGCTTGGCTG...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp CTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGTTACCCACACAGATGGCTaGATCCGGTGCTACGGGAAA +
Preference number: 4 (lower is better)
Translates to: LPAPTKAPVTPTWHSHPVTHTDG*IRCYGK
Trigger: TTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGT...AACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACGGTTCATCACGAGCATaGGGGAACAGCAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYGSSRA*GNSKGH
Trigger: GTGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACC...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTCCCAGAACTTGATGTaGCCTGATCCCGATGTAGTA +
Preference number: 4 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPSQNLM*PDPDVV
Trigger: TACTACATCGGGATCAGGCCACATCAAGTTCTGGGA...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGGACAATCTCGTTAAGTaGGGGGCCAGACCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGDNLVK*GARPWL
Trigger: AAGCCAGGGTCTGGCCCCCCACTTAACGAGATTGTC...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGCAGGGCCTCCTCTGCTaGATTCAGATTAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGQGLLC*IQISCH
Trigger: GTGGCAACTAATCTGAATGCAGCAGAGGAGGCCCTG...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCAGACACCCACACAGATaGCTGGATCCGGTGCTACGG +
Preference number: 4 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIRHPHR*LDPVLR
Trigger: CCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCT...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGGACAGAGCTCCACTTTaGTCAGACCACCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGDRAPL*SDHLPK
Trigger: TTTGGGAAGGTGGTCTGATCAAAGTGGAGCTCTGTC...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp CTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGTTAAGGAGACGGAGTTCTaGATCGAAAGTGACAACCAG +
Preference number: 4 (lower is better)
Translates to: LPAPTKAPVTPTWHSHPVKETEF*IESDNQ
Trigger: CTGGTTGTCACTTTCGATGCAGAACTCCGTCTCCTT...AACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCGTGACACAAGCAGTATaGGGTTTGAAAACCTGTTTC +
Preference number: 4 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPVTQAV*GLKTCF
Trigger: GAAACAGGTTTTCAAACCCCATACTGCTTGTGTCAC...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGCTTTCCGCCTGGAGTTaGATCAATTCAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGLSAWS*INSVTS
Trigger: GGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAG...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGTCCCAAGCGGCCCTATaGAGAGGCCCACATGGCGAG +
Preference number: 4 (lower is better)
Translates to: NSVTSSLATTSASRGPWKSQAAL*RGPHGE
Trigger: CTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGA...CTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR CCA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCCTGGGGAGCCCGCTGTaGTGGGACAGGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: STITKGMVSPQDLSQRPALGSPL*WDRLAG
Trigger: GCCAGCCAGCCTGTCCCACCACAGCGGGCTCCCCAG...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTCAGACCTCCCTAAGCTaGGGAGCCCGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSQTSLS*GARCGG
Trigger: CCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTG...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCGGCCCACAGATAAGCTaGCAAGAGGAAGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIGPQIS*QEEGSQ
Trigger: CTGGGATCCTTCCTCTTGCCAGCTTATCTGTGGGCC...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGTTGTCCCGCAAAAATCGTaGGCCCTTTTGGATCATAAA +
Preference number: 4 (lower is better)
Translates to: LPAPTKAPVTPTWHSHPVVPQKS*ALLDHK
Trigger: TTTATGATCCAAAAGGGCTCACGATTTTTGCGGGAC...AACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGCTCTCTTTTCTCGGATaGGCTGTTTACGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGLSFLG*AVYVSL
Trigger: GAGAGAGACGTAAACAGCTCATCCGAGAAAAGAGAG...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GCTCCTAGTGTGACTGCAACTCCACGAAAGACCCTGAGCCAGAACACCCGGCCAACCCGCCCTTCTCAGTaGCCAGCTTATCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: APSVTATPRKTLSQNTRPTRPSQ*PAYPGT
Trigger: TGTTCCAGGATAAGCTGGTCACTGAGAAGGGCGGGT...TGGCCGGGTGTTCTGGCTCAGGGTCTTTCGTGGAGTTGCAGTCACACTAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACCAGGCTAATCACAGGTaGGGAAGACTTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYQANHR*GRLGIA
Trigger: AGCAATGCCAAGTCTTCCTCACCTGTGATTAGCCTG...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGGTCTACTTGTGTTTaGAGCTTAACTTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPWSTCV*SLTSQR
Trigger: TCTTTGGGAAGTTAAGCTTCAAACACAAGTAGACCA...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCCCTTACCCTCAGAGGTaGGGCTGCTCCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFPYPQR*GCSSGS
Trigger: GCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGG...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGTTTTCCTAAGATGCCCATaGGAACAGACCAAGATGTGT +
Preference number: 4 (lower is better)
Translates to: LPAPTKAPVTPTWHSHPVFLRCP*EQTKMC
Trigger: ACACATCTTGGTCTGTTCTCATGGGCATCTTAGGAA...AACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACAGGAGTCCTACCCGTTaGGGTTGGAGAGGGAAAATA +
Preference number: 4 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYRSPTR*GWRGKI
Trigger: TATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCT...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp TCCCCAGATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTGCTGCTTCTTGTGGCTaGCAGCTCCCACGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SPDSWTSETLSLLGEITSAASCG*QLPRRP
Trigger: GGGCCTTCGTGGGAGCTGGCAGCCACAAGAAGCAGC...ACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCCTTTATGGTTGGAAGTaGAGCTTCAAGAATATAGCC +
Preference number: 4 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPLYGWK*SFKNIA
Trigger: GGCTATATTCTTGAAGCTCCACTTCCAACCATAAAG...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp ACATGGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTGTGGTGGGACAGGCTGTGGAGACTGAATGGGTaGGAGGATAAGACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: TWLTDLPKLGSPLWWDRLWRLNG*EDKTAF
Trigger: AAAGGCAGTCTTATCCTCCCACCCATTCAGTCTCCA...CAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGGAGCCCGCTGTGGTaGGACAGGCTGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLLHSELRSLQKLWAIQEGSPLW*DRLAGR
Trigger: CCTGCCAGCCAGCCTGTCCCACCACAGCGGGCTCCC...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp CTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGTTGTTTTCTCCAATGGCTaGTTGAAAACCAGCATAGAG +
Preference number: 4 (lower is better)
Translates to: LPAPTKAPVTPTWHSHPVVFSNG*LKTSIE
Trigger: CTCTATGCTGGTTTTCAAGCAGCCATTGGAGAAAAC...AACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCTCATGGATTCGTTCTTaGAGCCGTCTCAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: ISQAALWRGPHGEELKPCSWIRS*SRLKAW
Trigger: CCATGCCTTGAGACGGCTGCAAGAACGAATCCATGA...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGTCCTCTCAGTTGAAATaGACAGCAAGTCCTGATGTG +
Preference number: 4 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGSSQLK*TASPDV
Trigger: CACATCAGGACTTGCTGTGCATTTCAACTGAGAGGA...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGCCTTTTATTTCCATaGACCAAAGAATCTAGGTGT +
Preference number: 4 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPCLLFP*TKESRC
Trigger: ACACCTAGATTCTTTGGTCCATGGAAATAAAAGGCA...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCTGTGGTGGGACAGGCTaGCTGGCAGGCATGAGCAAC +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFCGGTG*LAGMSN
Trigger: GTTGCTCATGCCTGCCAGCCAGCCTGTCCCACCACA...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AAACTCAAAGGTCTGCGGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGCAGACCTCCCTAAGCTaGGGAGCCCGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: KLKGLRAVSLSLVETEWVQTSLS*GARCGG
Trigger: CCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTG...CACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR TCA 90 bp CTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGTTTTAACAGAAAGCGTTTaGAGGGCTTCTAGATTTACC +
Preference number: 4 (lower is better)
Translates to: LPAPTKAPVTPTWHSHPVLTESV*RASRFT
Trigger: GGTAAATCTAGAAGCCCTTCAAACGCTTTCTGTTAA...AACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCGTTGGATCAATTCAGTaGCCTCCTCTCTTGCCACAA +
Preference number: 4 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIVGSIQ*PPLLPQ
Trigger: TTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAAC...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGTTGATTCCAAATGTCAGTaGGATTATCCTGCAATGGTT +
Preference number: 4 (lower is better)
Translates to: LPAPTKAPVTPTWHSHPVDSKCQ*DYPAMV
Trigger: AACCATTGCAGGATAATCTCACTGACATTTGGAATC...AACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGTTAAGACTTGGCATTGCTaGGTTCCCTTCTACATTTAT +
Preference number: 4 (lower is better)
Translates to: LPAPTKAPVTPTWHSHPVKTWHC*VPFYIY
Trigger: ATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTT...AACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GCTCCTAGTGTGACTGCAACTCCACGAAAGACCCTGAGCCAGAACACCCGGCCAGCAACTCCTTTACTCTaGAGTTGTGACAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: APSVTATPRKTLSQNTRPATPLL*SCDRGA
Trigger: AGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGC...TGGCCGGGTGTTCTGGCTCAGGGTCTTTCGTGGAGTTGCAGTCACACTAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGTTCAGGTCCATCAGAAATaGGATCTGAAAAAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: LPAPTKAPVTPTWHSHPVQVHQK*DLKKVV
Trigger: TACTACCTTTTTCAGATCTCATTTCTGATGGACCTG...AACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGTCAATAGCTCCAGAATaGAAGGAGAAGAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGSIAPE*KEKRHS
Trigger: AGAATGCCTCTTCTCCTTCCATTCTGGAGCTATTGA...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCTATCTCTTTCTCTCGTaGAGACTGAATGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIYLFLS*RLNGWE
Trigger: CTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATA...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGGTGAGGCTGCTCCTCTaGGAGCACAGCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SWINSVTSSLATTSASRGVRLLL*EHSRRQ
Trigger: CTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCAC...CCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR CCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCAGGGAGCCCGCTGTGGTaGGACAGGCTGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSGSPLW*DRLAGR
Trigger: CCTGCCAGCCAGCCTGTCCCACCACAGCGGGCTCCC...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGTTTCCTCGAAGGTACTaGCCGCCGCGGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GHEISERRNSHGFNSSRMFPRRY*PPRLLS
Trigger: AGAGAGGAGCCGCGGCGGTCAGTACCTTCGAGGAAA...CATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp TCCCCAGATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTACCCGCCCTTCTCAGTaGCCAGCTTATCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: SPDSWTSETLSLLGEITSTRPSQ*PAYPGT
Trigger: TGTTCCAGGATAAGCTGGTCACTGAGAAGGGCGGGT...ACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCCTTACCCTCAGAGGTaGGGCTGCTCCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: EQSPPLRPKSFPPGVGSIPYPQR*GCSSGS
Trigger: GCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGG...AATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR GCA 90 bp ACATGGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTGTGGTGGGACAGGCTGCAAAGCAAACTGCTCTaGCATGTCTGTTTGTATTTC +
Preference number: 4 (lower is better)
Translates to: TWLTDLPKLGSPLWWDRLQSKLL*HVCLYF
Trigger: GAAATACAAACAGACATGGCAGAGCAGTTTGCTTTG...CAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCCACTCTTGGATCACTTaGTCTGGGAGAAGTCATATC +
Preference number: 4 (lower is better)
Translates to: ISQAALWRGPHGEELKPCHSWIT*SGRSHI
Trigger: GATATGACTTCTCCCAGAGCAAGTGATCCAAGAGTG...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp ACATGGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTGTGGTGGGACAGGCTGGAAATAAGTTTTATGTaGATGAACCCCAATGACGCC +
Preference number: 4 (lower is better)
Translates to: TWLTDLPKLGSPLWWDRLEISFM*MNPNDA
Trigger: GGCGTCATTGGGGTTCATCCACATAAAACTTATTTC...CAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp CGACCTAGTGATCCCTGCAGCTTGAGACCGGTGAACGTAAAAGCCATTTCCCAGGAGCACCTTCCCATCTaGGAGCTCCATGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RPSDPCSLRPVNVKAISQEHLPI*ELHVAF
Trigger: GAAGGCTACATGGAGCTCCCAGATGGGAAGGTGCTC...CTGGGAAATGGCTTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488854.6
ENST00000489938.2
CDS-3UTR CCA 90 bp ACATGGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTGTGGTGGGACAGGCTGGAGGAATTTTGGGAATaGGTATGTGCTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: TWLTDLPKLGSPLWWDRLEEFWE*VCAWIC
Trigger: ACATATCCAAGCACATACCCATTCCCAAAATTCCTC...CAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCGAGAAATTTAGCACATaGCTCACAGACCTCCCTAAG +
Preference number: 4 (lower is better)
Translates to: ISQAALWRGPHGEELKPCEKFST*LTDLPK
Trigger: CTTAGGGAGGTCTGTGAGCCATGTGCTAAATTTCTC...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACAGAGAGAACTTCATGTaGAAGTGCAGCATGGTTTTC +
Preference number: 4 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYRENFM*KCSMVF
Trigger: GAAAACCATGCTGCACTTCCACATGAAGTTCTCTCT...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 72 bp GAACTGAAGCCCTGCCTAATGGCCAAGGGAGTGAATTaGCTAATAGCCCCTCCAGCTCCAGCCAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ELKPCLMAKGVN*LIAPPAPAKLQ
Trigger: CTGAAGCTTGGCTGGAGCTGGAGGGGCTATTAGCAAATTCACTCCCTTGGCCATTAGGCAGGGCTTCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCCCATTTCCCAGAACTTaGTGTGGCCTGATCCCGATG +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFPFPRT*CGLIPM
Trigger: CATCGGGATCAGGCCACATCAAGTTCTGGGAAATGG...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp CCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGGCATTGCCATTTTCTATCTGGTGGAGCTTaGGCGGAATCACAACTAGCA +
Preference number: 4 (lower is better)
Translates to: PLLPQHLLPEGPGRHCHFLSGGA*AESQLA
Trigger: TGCTAGTTGTGATTCCGCTCAAGCTCCACCAGATAG...AAAATGGCAATGCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR TCA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACGAGAGATTCTTAAAGTaGCTTAACGTGACTGGATCT +
Preference number: 4 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYERFLK*LNVTGS
Trigger: AGATCCAGTCACGTTAAGTCACTTTAAGAATCTCTC...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp ACATGGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTGTGGTGGGACAGGCTGCCTCTAAGAATATGCTaGTGTACAAAGAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: TWLTDLPKLGSPLWWDRLPLRIC*CTKKAR
Trigger: TCTTGCTTTCTTTGTACATCAGCATATTCTTAGAGG...CAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGAGTTATATGAACAATTaGCCCACAAGTAACTCAGTG +
Preference number: 4 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGSYMNN*PTSNSV
Trigger: CACTGAGTTACTTGTGGGTCAATTGTTCATATAACT...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAAGCACCTGCTATTCCTaGCTTCTGCATCCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: GRIPGTWFITSMREQQGASTCYS*LLHPFS
Trigger: GGAAAAAGGATGCAGAAGTCAGGAATAGCAGGTGCT...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTGGTAACACTCCCACCTaGATCTCTCTGGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSGNTPT*ISLAVL
Trigger: AAGGACAGCCAGAGAGATGCAGGTGGGAGTGTTACC...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp AGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGTCTTGCCACAACATCTaGTTCCCGAGGGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SWINSVTSSLATTSASRGSCHNI*FPRALE
Trigger: TTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGA...CCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCATGGAGACTGATGCTTaGAATGAAAGCCTTACTACG +
Preference number: 4 (lower is better)
Translates to: ISQAALWRGPHGEELKPCMETDA*NESLTT
Trigger: CGTAGTAAGGCTTTCATTGCAAGCATCAGTCTCCAT...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCAAAATCCACAGAGGATaGGAGAGGGGGTTGACGGAA +
Preference number: 4 (lower is better)
Translates to: AVQGSCGHEISERRNSHGKIHRG*ERGLTE
Trigger: TTCCGTCAACCCCCTCTCCCATCCTCTGTGGATTTT...GCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCCACAACTGCCTTGGACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp GCTCCTAGTGTGACTGCAACTCCACGAAAGACCCTGAGCCAGAACACCCGGCCAAGCCGTCTCAAGGCATaGTTAGAGAAGACCAAAGTA +
Preference number: 4 (lower is better)
Translates to: APSVTATPRKTLSQNTRPSRLKA*LEKTKV
Trigger: TACTTTGGTCTTCTCTAACCATGCCTTGAGACGGCT...TGGCCGGGTGTTCTGGCTCAGGGTCTTTCGTGGAGTTGCAGTCACACTAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp CCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGGCATTGCCATTTTCTTTCCGCCTGGAGTTaGATCAATTCAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: PLLPQHLLPEGPGRHCHFLSAWS*INSVTS
Trigger: GGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAG...AAAATGGCAATGCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCCTGTCCCCAGATTCCTaGACCTCAGAAACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFLSPDS*TSETLS
Trigger: TGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGACAG...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGGGAGGATAAGACTGCCAGGATCCCAGGCACATaGTTCATCACGAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: GLYLFLSWRLNGWEDKTARIPGT*FITSMR
Trigger: CCTCATGCTCGTGATGAACCATGTGCCTGGGATCCT...GGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
3UTR CAA 72 bp CAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACTaGTGTTTGAAGCTTAACTTCCCAAAGACTCAGATG +
Preference number: 4 (lower is better)
Translates to: QPPCPCHTLLVY*CLKLNFPKTQM
Trigger: CATCTGAGTCTTTGGGAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTGAACTTGATGTGGCCTaGTCCCGATGTAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSELDVA*SRCSKL
Trigger: CAGCTTACTACATCGGGATCAGGCCACATCAAGTTC...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACAGTACCTCCTTGTTTaGATTTCATCTGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GRIPGTWFITSMREQQGAQYLLV*ISSGPK
Trigger: CTTTGGCCCAGATGAAATTCAAACAAGGAGGTACTG...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACCCACTTGTTGAATTTTaGAAGCTGTTTTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYPLVEF*KLFFCA
Trigger: TGCACAGAAAAACAGCTTTCAAAATTCAACAAGTGG...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCTTGGTATATCTAGGCTaGATGTTGATGCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: ISQAALWRGPHGEELKPCLVYLG*MLMPLM
Trigger: CATCAAAGGCATCAACATTCAGCCTAGATATACCAA...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCTTTCTTGAAATAAGGTaGCATGGTGCAGGTCAGATA +
Preference number: 4 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIFLEIR*HGAGQI
Trigger: TATCTGACCTGCACCATGTCACCTTATTTCAAGAAA...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCCCTTTCGAAGTTTTCTaGTCTTCAGTTCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: ISQAALWRGPHGEELKPCPFEVF*SSVLQV
Trigger: CACTTGAAGAACTGAAGATCAGAAAACTTCGAAAGG...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCACTCTCTCCAGGCAGAAGGCATTGCCCTGCTaGTTCTGTAGTGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: GMVSPQDLSQRPATLSRQKALPC*FCSVFN
Trigger: GTTGAATACACTACAGAATCAGCAGGGCAATGCCTT...CTGCCTGGAGAGAGTGGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCCGACCTAGTGATCCCTaGAGCTTGAGACCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: STITKGMVSPQDLSQRPARPSDP*SLRPVN
Trigger: GTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCG...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp GGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGGGAGGATAAGACTGCCTCATGGATTCGTTCTTaGAGCCGTCTCAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: GLYLFLSWRLNGWEDKTASWIRS*SRLKAW
Trigger: CCATGCCTTGAGACGGCTGCAAGAACGAATCCATGA...GGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGGCCCTGGAAGGCATTaGCCTGCTGATTCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: KAEILSAWSWINSVTSSLGPGRH*PADSVV
Trigger: CACTACAGAATCAGCAGGGCAATGCCTTCCAGGGCC...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR GCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTTCTTGCCACAACATCTaGTTCCCGAGGGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KAEILSAWSWINSVTSSLSCHNI*FPRALE
Trigger: TTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGA...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp CGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACGACGCTCTCAGTCATTaGTTTGCTATCCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RNPFRLELDQFSDLLSCHDALSH*FAIQRP
Trigger: GGGCCTCTGGATAGCAAAGCAATGACTGAGAGCGTC...GTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR GCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCAACTTCATGTGGAAGTaGAGCATGGTTTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SGRRGCRRPTDKLARGRINFMWK*SMVFRK
Trigger: TTTCCTGAAAACCATGCTGCACTTCCACATGAAGTT...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTGATGGCTGGATCCGGTaGTACGGGAAACATTTTCCT +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSDGWIR*YGKHFP
Trigger: AGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATC...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCATCCCAGCTATGTATATaGCGATACTGTCGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GRIPGTWFITSMREQQGASQLCI*RYCRPE
Trigger: TTCTGGACGACAGTATCGCCATATACATAGCTGGGA...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACAGTATCACTTTCCAGTaGATCTCGAAATCGATTCTT +
Preference number: 4 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYSITFQ*ISKSIL
Trigger: AAGAATCGATTTCGAGATCCACTGGAAAGTGATACT...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACTTCTGGAACTTCTTCTaGGTGTATCTGAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYFWNFF*VYLRNF
Trigger: AAAATTCCTCAGATACACCCAGAAGAAGTTCCAGAA...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCCTTGAAAGGCACACATaGCTTAGGATATACAACACA +
Preference number: 4 (lower is better)
Translates to: ISQAALWRGPHGEELKPCLERHT*LRIYNT
Trigger: TGTGTTGTATATCCTAAGCCATGTGTGCCTTTCAAG...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCACTCTCTCCAGGCAGCAATTACCAAGGGGATaGTATCGCCTCAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: GMVSPQDLSQRPATLSRQQLPRG*YRLKTF
Trigger: AAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTG...CTGCCTGGAGAGAGTGGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAATCCAGTGGTATGTTTaGATCCAGAGTCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: GRIPGTWFITSMREQQGAIQWYV*IQSHKR
Trigger: CCTTTTGTGACTCTGGATTCAAACATACCACTGGAT...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GGCAGTTGTGGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCTTCAATAGCGAACTTGATGTGGCCTaGTCCCGATGTAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: GSCGHEISERRNSHGFNSELDVA*SRCSKL
Trigger: CAGCTTACTACATCGGGATCAGGCCACATCAAGTTC...GCTATTGAAGCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCCACAACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp GTGAGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGGACAGAGCTCCACTTTaGTCAGACCACCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VRGETATASIAPEWKEKRDRAPL*SDHLPK
Trigger: TTTGGGAAGGTGGTCTGATCAAAGTGGAGCTCTGTC...CCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp CGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCTTCTCTCGTGGAGACTaGATGGGTGGGAGGATAAGA +
Preference number: 4 (lower is better)
Translates to: RLELDQFSDLLSCHNICFFSRGD*MGGRIR
Trigger: TCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAA...GAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCGATTTGCTGCAATCATaGAACACAGCCTTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFDLLQS*NTAFRD
Trigger: GTCTCGGAAGGCTGTGTTTCATGATTGCAGCAAATC...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCAGCCATGAACTTCAATaGGCACTTACCCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFSHELQ*ALTPKP
Trigger: TGGTTTGGGGGTAAGTGCTCATTGAAGTTCATGGCT...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GCTCCTAGTGTGACTGCAACTCCACGAAAGACCCTGAGCCAGAACACCCGGCCAAAGACTTGGCATTGCTaGGTTCCCTTCTACATTTAT +
Preference number: 4 (lower is better)
Translates to: APSVTATPRKTLSQNTRPKTWHC*VPFYIY
Trigger: ATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTT...TGGCCGGGTGTTCTGGCTCAGGGTCTTTCGTGGAGTTGCAGTCACACTAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGGGAGGATAAGACTGCCAGCTTTCCTCTCAGTTaGAATGCACAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLYLFLSWRLNGWEDKTASFPLS*NAQQVL
Trigger: CAGGACTTGCTGTGCATTTCAACTGAGAGGAAAGCT...GGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR TCA 90 bp CGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCAGGGAAGAGTCACTCTaGCTGTTTAGGGCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RLELDQFSDLLSCHNICFREESL*LFRASA
Trigger: TGCACTTGCCCTAAACAGTCAGAGTGACTCTTCCCT...GAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR GCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCAAACCTGTCCAATTTaGTTGGTTTTCTCTCTGATT +
Preference number: 4 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIQTCPI*LVFSLI
Trigger: AATCAGAGAGAAAACCAAGCAAATTGGACAGGTTTG...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTTTGCTGATCATGAGCTaGCGGACTGTTTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSLLIMS*RTVSSI
Trigger: AATGGAGGAAACAGTCCGGCAGCTCATGATCAGCAA...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCTCAGTGAGATTATCCTaGAATGGTTATAGCCATGAA +
Preference number: 4 (lower is better)
Translates to: ISQAALWRGPHGEELKPCSVRLS*NGYSHE
Trigger: TTCATGGCTATAACCATTGCAGGATAATCTCACTGA...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGCTGCTTCTTGTGGCTaGCAGCTCCCACGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKAASCG*QLPRRP
Trigger: GGGCCTTCGTGGGAGCTGGCAGCCACAAGAAGCAGC...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCATACTGTTTAGCTAAGTaGTGTGCCACACATGGACAT +
Preference number: 4 (lower is better)
Translates to: GRIPGTWFITSMREQQGAYCLAK*CATHGH
Trigger: ATGTCCATGTGTGGCACAGCACTTAGCTAAACAGTA...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp ATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGGTGAACGTAGAGCACCTTCCCATCTaGGAGCTCCATGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: IVLPNRPSDPCSLRPVNVEHLPI*ELHVAF
Trigger: GAAGGCTACATGGAGCTCCCAGATGGGAAGGTGCTC...TACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488854.6
ENST00000489938.2
CDS-3UTR CCA 90 bp GGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCACTCTCTCCAGGCAGTTTCAGGATGAGACATaGGAGACCACATTAACTGAC +
Preference number: 4 (lower is better)
Translates to: GMVSPQDLSQRPATLSRQFQDET*ETTLTD
Trigger: GTCAGTTAATGTGGTCTCCCATGTCTCATCCTGAAA...CTGCCTGGAGAGAGTGGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAGTATCTGAGGAATTTTaGGAATGGGTATGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GRIPGTWFITSMREQQGAVSEEF*EWVCAW
Trigger: CCAAGCACATACCCATTCCCAAAATTCCTCAGATAC...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGGGAGGATAAGACTGCCACCACATACTCTATCTaGTGGAGCTTGAGCGGAATC +
Preference number: 4 (lower is better)
Translates to: GLYLFLSWRLNGWEDKTATTYSI*WSLSGI
Trigger: GATTCCGCTCAAGCTCCACCAGATAGAGTATGTGGT...GGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CCA 90 bp AATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGAGCCGTCTCAAGGCATaGTTAGAGAAGACCAAAGTA +
Preference number: 4 (lower is better)
Translates to: NSVTSSLATTSASRGPWKSRLKA*LEKTKV
Trigger: TACTTTGGTCTTCTCTAACCATGCCTTGAGACGGCT...CTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CCA 90 bp GGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCTATCTCTTTCTCTCGTaGAGACTGAATGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GRNPFRLELDQFSDLLSCYLFLS*RLNGWE
Trigger: CTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATA...GCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CCA 90 bp GCTCCTAGTGTGACTGCAACTCCACGAAAGACCCTGAGCCAGAACACCCGGCCAGGCTGTAAAAGACTGTaGCTCTTGTATACATCATTC +
Preference number: 4 (lower is better)
Translates to: APSVTATPRKTLSQNTRPGCKRL*LLYTSF
Trigger: GAATGATGTATACAAGAGCCACAGTCTTTTACAGCC...TGGCCGGGTGTTCTGGCTCAGGGTCTTTCGTGGAGTTGCAGTCACACTAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTGGCAGCTGCTTCTTGTaGCTGCCAGCTCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGGSCFL*LPAPTK
Trigger: CTTCGTGGGAGCTGGCAGCCACAAGAAGCAGCTGCC...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp ATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTGACAATCTCGTTAAGTaGGGGGCCAGACCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IPGPQKPSHSWVRSQVCCDNLVK*GARPWL
Trigger: AAGCCAGGGTCTGGCCCCCCACTTAACGAGATTGTC...ACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 72 bp CATTCTCTCTTGCTGTCTCCCTCACTCTTGGATCACTaGCTCTGGGAGAAGTCATATCCCAAGCGGCCCTAT +
Preference number: 4 (lower is better)
Translates to: HSLLLSPSLLDH*LWEKSYPKRPY
Trigger: ATAGGGCCGCTTGGGATATGACTTCTCCCAGAGCAAGTGATCCAAGAGTGAGGGAGACAGCAAGAGAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp TCAGTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGGGGACCATTGTGACATaGCTTGCTTGTCCCTCGACA +
Preference number: 4 (lower is better)
Translates to: SVVIVLPNRPSDPCSLRPGTIVT*LACPST
Trigger: TGTCGAGGGACAAGCAAGTCATGTCACAATGGTCCC...CGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp GAGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGCAGATGGGAGAGGGGGTTaGCGGAATAAATATTTCAGG +
Preference number: 4 (lower is better)
Translates to: ERRNSHGFNSSRMEGEEADGRGG*RNKYFR
Trigger: CCTGAAATATTTATTCCGTCAACCCCCTCTCCCATC...TGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTGGGCTGTCTTCAGATTaGAATCTCCCATATACACCT +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSGLSSD*NLPYTP
Trigger: AGGTGTATATGGGAGATTTCAATCTGAAGACAGCCC...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTGTATTTCCTGAATCCTaGGCCCTCAAAACACTGCTT +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSVFPES*ALKTLL
Trigger: AAGCAGTGTTTTGAGGGCTCAGGATTCAGGAAATAC...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTCAGGCTAATCACAGGTaGGGAAGACTTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: KAEILSAWSWINSVTSSLQANHR*GRLGIA
Trigger: AGCAATGCCAAGTCTTCCTCACCTGTGATTAGCCTG...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR GCA 90 bp AATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGGTTTTCTCCAATGGCTaGTTGAAAACCAGCATAGAG +
Preference number: 4 (lower is better)
Translates to: NSVTSSLATTSASRGPWKVFSNG*LKTSIE
Trigger: CTCTATGCTGGTTTTCAAGCAGCCATTGGAGAAAAC...CTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR GCA 90 bp GAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCTCCAGGGCCTCCTCTaGTGCATTCAGATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: EQSPPLRPKSFPPGVGSILQGLL*CIQISC
Trigger: GCAACTAATCTGAATGCAGCAGAGGAGGCCCTGGAG...AATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR GCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTTCATGGATTCGTTCTTaGAGCCGTCTCAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: KAEILSAWSWINSVTSSLSWIRS*SRLKAW
Trigger: CCATGCCTTGAGACGGCTGCAAGAACGAATCCATGA...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp AGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGGGCTGGTTATTTTCCTaGTTTCTGCCAACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SWINSVTSSLATTSASRGGWLFS*FLPTQS
Trigger: GCTTTGGGTTGGCAGAAAGCAGGAAAATAACCAGCC...CCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTGATCTTTACTCCCTGTaGCTAGAATTTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSDLYSL*LEFPHH
Trigger: GTGATGGGGAAATTCTAGCCACAGGGAGTAAAGATC...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCAATGTCTTCTGGAATTaGCTCTGTTTCAATTCCAAA +
Preference number: 4 (lower is better)
Translates to: SGRRGCRRPTDKLARGRINVFWN*LCFNSK
Trigger: TTTGGAATTGAAACAGAGCCAATTCCAGAAGACATT...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp TCCCCAGATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTGAAATCCTTTCCGCCTaGAGTTGGATCAATTCAGTG +
Preference number: 4 (lower is better)
Translates to: SPDSWTSETLSLLGEITSEILSA*SWINSV
Trigger: CACTGAATTGATCCAACTCCAGGCGGAAAGGATTTC...ACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCGAAATCCTTTCCGCCTaGAGTTGGATCAATTCAGTG +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFEILSA*SWINSV
Trigger: CACTGAATTGATCCAACTCCAGGCGGAAAGGATTTC...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGTTTCATAACAGAGGTTaGGTGCTGCAGTCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: NSVTSSLATTSASRGPWKFHNRG*VLQSVL
Trigger: TAGAACTGACTGCAGCACCCAACCTCTGTTATGAAA...CTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CCA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGGTGAGGCTGCTCCTCTaGGAGCACAGCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLVRLLL*EHSRRQ
Trigger: CTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCAC...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGTGTGGTGGGACAGGCTaGCTGGCAGGCATGAGCAAC +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKCGGTG*LAGMSN
Trigger: GTTGCTCATGCCTGCCAGCCAGCCTGTCCCACCACA...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTCTTTCTGCACAGCACTaGAATCATAGCACTCAATGG +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSLSAQH*NHSTQW
Trigger: CCATTGAGTGCTATGATTCCAGTGCTGTGCAGAAAG...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTAGACACCCACACAGATaGCTGGATCCGGTGCTACGG +
Preference number: 4 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLRHPHR*LDPVLR
Trigger: CCGTAGCACCGGATCCAGCCATCTGTGTGGGTGTCT...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGACAGACTCCTAACCTaGGGCCTCTGCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKDRLLT*GLCSGR
Trigger: CCTGCCACTGCAGAGGCCCCAGGTTAGGAGTCTGTC...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AATCAGAATCTCAGAATGGGAAGGAACCCATTCTACCAATCCTTCATTTGTCAGTTTCCTCGAAGGTACTaGCCGCCGCGGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: NQNLRMGRNPFYQSFICQFPRRY*PPRLLS
Trigger: AGAGAGGAGCCGCGGCGGTCAGTACCTTCGAGGAAA...CTGACAAATGAAGGATTGGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTGGAGCAGGGGTTTGCTaGGGTACTGTAGTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGGAGVC*GTVVLC
Trigger: GCAAAGCACTACAGTACCTCAGCAAACCCCTGCTCC...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GAGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGCATTAATGGGACCATTGTaGCATGACTTGCTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: ERRNSHGFNSSRMEGEEALMGPL*HDLLVP
Trigger: AGGGACAAGCAAGTCATGTCACAATGGTCCCATTAA...TGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp TCCCCAGATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTCCTAACATATCCATCTaGCCCAACAGTGATAACTTC +
Preference number: 4 (lower is better)
Translates to: SPDSWTSETLSLLGEITSPNISI*PNSDNF
Trigger: GAAGTTATCACTGTTGGGTCAGATGGATATGTTAGG...ACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GTGAGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGGTCCCGCAAAAATCGTaGGCCCTTTTGGATCATAAA +
Preference number: 4 (lower is better)
Translates to: VRGETATASIAPEWKEKRVPQKS*ALLDHK
Trigger: TTTATGATCCAAAAGGGCTCACGATTTTTGCGGGAC...CCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCGAACTTCCCTGGCTCTaGGTAAAATCCACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: STITKGMVSPQDLSQRPAELPWL*VKSTED
Trigger: ATCCTCTGTGGATTTTACTCAGAGCCAGGGAAGTTC...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp AGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGCATGAACTTCCCTGGCTCTaGGTAAAATCCACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: RGETATASIAPEWKEKRHELPWL*VKSTED
Trigger: ATCCTCTGTGGATTTTACTCAGAGCCAGGGAAGTTC...ATGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTCTCTCTTTTCTCGGATaGGCTGTTTACGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KAEILSAWSWINSVTSSLLSFLG*AVYVSL
Trigger: GAGAGAGACGTAAACAGCTCATCCGAGAAAAGAGAG...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp CCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGGCATTGCCATTTTCCTTTCGAAGTTTTCTaGTCTTCAGTTCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: PLLPQHLLPEGPGRHCHFPFEVF*SSVLQV
Trigger: CACTTGAAGAACTGAAGATCAGAAAACTTCGAAAGG...AAAATGGCAATGCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR TCA 90 bp GGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCACTCTCTCCAGGCAGCAAAACACTGCTTTATaGAGTCAACAATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: GMVSPQDLSQRPATLSRQQNTAL*SQQCQN
Trigger: GTTTTGGCATTGTTGACTTCATAAAGCAGTGTTTTG...CTGCCTGGAGAGAGTGGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACGTATTTCCTGAATCCTaGGCCCTCAAAACACTGCTT +
Preference number: 4 (lower is better)
Translates to: RNPFRLELDQFSDLLSCHVFPES*ALKTLL
Trigger: AAGCAGTGTTTTGAGGGCTCAGGATTCAGGAAATAC...GTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp AGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGTGCTCCACTCAGAACTaGGGAGTCTACAAAAACTGT +
Preference number: 4 (lower is better)
Translates to: SWINSVTSSLATTSASRGCSTQN*GVYKNC
Trigger: ACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCA...CCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTTCTTGCCACAACATCTaGTTCCCGAGGGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPSCHNI*FPRALE
Trigger: TTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGA...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp CCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGGCATTGCCATTTTCAAAGCAAACTGCTCTaGCATGTCTGTTTGTATTTC +
Preference number: 4 (lower is better)
Translates to: PLLPQHLLPEGPGRHCHFQSKLL*HVCLYF
Trigger: GAAATACAAACAGACATGGCAGAGCAGTTTGCTTTG...AAAATGGCAATGCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR GCA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGCAGCCACCCTGCCCATaGCACACCCTGCTGGTCTAC +
Preference number: 4 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMQPPCP*HTLLVY
Trigger: GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTG...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCATGGAGACTGATGCTTaGAATGAAAGCCTTACTACG +
Preference number: 4 (lower is better)
Translates to: GRNPFRLELDQFSDLLSCMETDA*NESLTT
Trigger: CGTAGTAAGGCTTTCATTGCAAGCATCAGTCTCCAT...GCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR GCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACACATGGACATATGGTaGATAATAAATTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: GRIPGTWFITSMREQQGAHMDIW*IINSLP
Trigger: GGGAAGTGAATTTATTATGCACCATATGTCCATGTG...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGCATTCCATATGGCTCCATTaGCATCCTGAGCCAACCAAA +
Preference number: 4 (lower is better)
Translates to: RGETATASIAPEWKEKRHSIWLH*HPEPTK
Trigger: TTTGGTTGGCTCAGGATGCCAATGGAGCCATATGGA...ATGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAAGTAGTCCACCAAACTaGTCAATGAAGGATCATTTT +
Preference number: 4 (lower is better)
Translates to: GRIPGTWFITSMREQQGASSPPN*SMKDHF
Trigger: AAAATGATCCTTCATTGACCAGTTTGGTGGACTACT...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCAGGTATCTTGTAGTCTaGGGCTGTCTTCAGATTGAA +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFRYLVV*GCLQIE
Trigger: TTCAATCTGAAGACAGCCCCAGACTACAAGATACCT...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp TACGCAAAAGAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTCTTTCCGCCTGGAGTTaGATCAATTCAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: YAKEQSPPLRPKSFPPGVLSAWS*INSVTS
Trigger: GGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAG...AACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTCTTTTGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCATCAGAATCTCAGAATaGGAAGGAACCCATTCTACC +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFIRISE*EGTHST
Trigger: GGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGAT...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTACCCACACAGATGGCTaGATCCGGTGCTACGGGAAA +
Preference number: 4 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLTHTDG*IRCYGK
Trigger: TTTCCCGTAGCACCGGATCCAGCCATCTGTGTGGGT...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTCACGGTATCACAGCCTaGAGACACCCACACAGATGG +
Preference number: 4 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLHGITA*RHPHRW
Trigger: CCATCTGTGTGGGTGTCTCCAGGCTGTGATACCGTG...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGTCCCCATCAGTATCCTaGTCATCTGGTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: GHEISERRNSHGFNSSRMSPSVS*SSGSFI
Trigger: AATGAAGGAACCAGATGATCAGGATACTGATGGGGA...CATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCGTGGATGAACCCCAATaGCGCCAATTCCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSVDEPQ*RQFLHH
Trigger: GTGGTGAAGGAATTGGCGTCATTGGGGTTCATCCAC...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp ATCATAGATTCGAACAGAGCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTGAGGGAGACCACATTAACTaGCACACAGGTCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: IIDSNRAVQGSCGHEISEGDHIN*HTGPGV
Trigger: TACTCCTGGACCTGTGTGTCAGTTAATGTGGTCTCC...CTCACTTATCTCATGGCCACAACTGCCTTGGACTGCTCTGTTCGAATCTATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp TACGCAAAAGAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTCTTTTCTCTCGAAGGTaGAGGGCCAGCTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: YAKEQSPPLRPKSFPPGVLFSRR*RASSKR
Trigger: TCTTTTTGAGCTGGCCCTTCACCTTCGAGAGAAAAG...AACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTCTTTTGCGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR TCA 90 bp GAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCTCTCTTTTCTCGGATaGGCTGTTTACGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: EQSPPLRPKSFPPGVGSILSFLG*AVYVSL
Trigger: GAGAGAGACGTAAACAGCTCATCCGAGAAAAGAGAG...AATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp GGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCAGACAGAACTTCCAGTaGGTTATGTCAGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: GRNPFRLELDQFSDLLSCRQNFQ*VMSEIL
Trigger: CAAGATTTCTGACATAACTCACTGGAAGTTCTGTCT...GCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCGAGAGATTCTTAAAGTaGCTTAACGTGACTGGATCT +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFERFLK*LNVTGS
Trigger: AGATCCAGTCACGTTAAGTCACTTTAAGAATCTCTC...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGATTTGCTGCAATCATaGAACACAGCCTTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: PLLHSELRSLQKLWAIQEDLLQS*NTAFRD
Trigger: GTCTCGGAAGGCTGTGTTTCATGATTGCAGCAAATC...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTCCCAAACATGCGGAATaGAGCCCTGAATATTGTAGA +
Preference number: 4 (lower is better)
Translates to: KAEILSAWSWINSVTSSLPKHAE*SPEYCR
Trigger: TCTACAATATTCAGGGCTTCATTCCGCATGTTTGGG...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR TCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCTGGTCTACTTGTGTTTaGAGCTTAACTTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFWSTCV*SLTSQR
Trigger: TCTTTGGGAAGTTAAGCTTCAAACACAAGTAGACCA...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGAAGAGCCAAGTTATATaGACAATTGACCCACAAGTA +
Preference number: 4 (lower is better)
Translates to: NSVTSSLATTSASRGPWKKSQVI*TIDPQV
Trigger: TACTTGTGGGTCAATTGTTCATATAACTTGGCTCTT...CTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR GCA 90 bp AAAATCATAGATTCGAACAGAGCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTTCTCTTCACAGCGTCTaGCGGAGGCCTCCGTTTACT +
Preference number: 4 (lower is better)
Translates to: KIIDSNRAVQGSCGHEISSLHSV*RRPPFT
Trigger: AGTAAACGGAGGCCTCCGGCAGACGCTGTGAAGAGA...ACTTATCTCATGGCCACAACTGCCTTGGACTGCTCTGTTCGAATCTATGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR GCA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCCCCGATGTAGTAAGCTaGTCTTCCTTATCAGGATTG +
Preference number: 4 (lower is better)
Translates to: STITKGMVSPQDLSQRPAPDVVS*SSLSGL
Trigger: CAATCCTGATAAGGAAGAGCAGCTTACTACATCGGG...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp CAAGGCAGTTGTGGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCTTCAATCCCGATGTAGTAAGCTaGTCTTCCTTATCAGGATTG +
Preference number: 4 (lower is better)
Translates to: QGSCGHEISERRNSHGFNPDVVS*SSLSGL
Trigger: CAATCCTGATAAGGAAGAGCAGCTTACTACATCGGG...ATTGAAGCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCCACAACTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR GCA 90 bp ATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGGTGAACGTACATTGTGACATGACTTaGTTGTCCCTCGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: IVLPNRPSDPCSLRPVNVHCDMT*LSLDRA
Trigger: AGCTCTGTCGAGGGACAAGCAAGTCATGTCACAATG...TACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR GCA 90 bp GGCAGTTGTGGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCTTCAATAGCCTCAAAGCTTTGATTTaGTCTCTCTTCCGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GSCGHEISERRNSHGFNSLKALI*SLFRAF
Trigger: AAAGGCACGGAAGAGAGAGCAAATCAAAGCTTTGAG...GCTATTGAAGCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCCACAACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR GCA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGCAAACTCAAAGGTCTaGGGGCTGTATCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PLLHSELRSLQKLWAIQEANSKV*GLYLFL
Trigger: GAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGC...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp GGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCAAAGCAAACTGCTCTaGCATGTCTGTTTGTATTTC +
Preference number: 4 (lower is better)
Translates to: GRNPFRLELDQFSDLLSCQSKLL*HVCLYF
Trigger: GAAATACAAACAGACATGGCAGAGCAGTTTGCTTTG...GCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTAGTGAATGTCAGTTGTaGTTGGATTCATGCAGAACA +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSSECQL*LDSCRT
Trigger: TGTTCTGCATGAATCCAAGCACAACTGACATTCACT...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp TCAGTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGTCCCAGAACTTGATGTaGCCTGATCCCGATGTAGTA +
Preference number: 4 (lower is better)
Translates to: SVVIVLPNRPSDPCSLRPSQNLM*PDPDVV
Trigger: TACTACATCGGGATCAGGCCACATCAAGTTCTGGGA...CGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp GAGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGCATTTCAGGATGAGACATaGGAGACCACATTAACTGAC +
Preference number: 4 (lower is better)
Translates to: ERRNSHGFNSSRMEGEEAFQDET*ETTLTD
Trigger: GTCAGTTAATGTGGTCTCCCATGTCTCATCCTGAAA...TGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp TCCCCAGATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTGGCTTGAAGATCTTTaGGATCTTCATAGTCATCAC +
Preference number: 4 (lower is better)
Translates to: SPDSWTSETLSLLGEITSWLEDL*DLHSHH
Trigger: GTGATGACTATGAAGATCCCAAAGATCTTCAAGCCA...ACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCATCTGATAAAGCTTTCTaGTGTGTTCTTTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GRIPGTWFITSMREQQGASDKAF*CVLLSS
Trigger: TGAAGACAAAAGAACACACCAGAAAGCTTTATCAGA...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAATGGAGACTGAATGGGTaGGAGGATAAGACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PLLHSELRSLQKLWAIQEWRLNG*EDKTAF
Trigger: AAAGGCAGTCTTATCCTCCCACCCATTCAGTCTCCA...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CCA 90 bp GAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTTGGAGACTGAATGGGTaGGAGGATAAGACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: EQSPPLRPKSFPPGVGSIWRLNG*EDKTAF
Trigger: AAAGGCAGTCTTATCCTCCCACCCATTCAGTCTCCA...AATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTCCCAAGCGGCCCTATaGAGAGGCCCACATGGCGAG +
Preference number: 4 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLSQAAL*RGPHGE
Trigger: CTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGA...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp TCCCCAGATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTGGCTGTAAAAGACTGTaGCTCTTGTATACATCATTC +
Preference number: 4 (lower is better)
Translates to: SPDSWTSETLSLLGEITSGCKRL*LLYTSF
Trigger: GAATGATGTATACAAGAGCCACAGTCTTTTACAGCC...ACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGGGCAGCTGCTTCTTGTaGCTGCCAGCTCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMGSCFL*LPAPTK
Trigger: CTTCGTGGGAGCTGGCAGCCACAAGAAGCAGCTGCC...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCCAATTACCAAGGGGATaGTATCGCCTCAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: STITKGMVSPQDLSQRPAQLPRG*YRLKTF
Trigger: AAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTG...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp CGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCTCATCGGTGATACTATaGATGACAGTTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RLELDQFSDLLSCHNICFSSVIL*MTVQKS
Trigger: GCTCTTCTGAACTGTCATCCATAGTATCACCGATGA...GAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR TCA 90 bp CCACCCTGCCCATGCCACACCCTGCTGGTCTACTTGTGTTTGAAGCTTAACTTCATCACCATACTGAAATaGACTCAAACTTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PPCPCHTLLVYLCLKLNFITILK*TQTSFQ
Trigger: TTGGAAGGAAGTTTGAGTTCATTTCAGTATGGTGAT...GAAGTTAAGCTTCAAACACAAGTAGACCAGCAGGGTGTGGCATGGGCAGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GGGTCCTGGGTAATATTTGAAAAACTAAGGTCAAGCTTCCATATGGCTCCATTGCCATTTCCCAGAACTTaGTGTGGCCTGATCCCGATG +
Preference number: 4 (lower is better)
Translates to: GSWVIFEKLRSSFHMAPLPFPRT*CGLIPM
Trigger: CATCGGGATCAGGCCACATCAAGTTCTGGGAAATGG...CAATGGAGCCATATGGAAGCTTGACCTTAGTTTTTCAAATATTACCCAGGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp AGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGCATCCTAACATATCCATCTaGCCCAACAGTGATAACTTC +
Preference number: 4 (lower is better)
Translates to: RGETATASIAPEWKEKRHPNISI*PNSDNF
Trigger: GAAGTTATCACTGTTGGGTCAGATGGATATGTTAGG...ATGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp ATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGGTGAACGTACAGTACCTCCTTGTTTaGATTTCATCTGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: IVLPNRPSDPCSLRPVNVQYLLV*ISSGPK
Trigger: CTTTGGCCCAGATGAAATTCAAACAAGGAGGTACTG...TACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTGGAGACCACATTAACTaGCACACAGGTCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGGDHIN*HTGPGV
Trigger: TACTCCTGGACCTGTGTGTCAGTTAATGTGGTCTCC...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp AGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGCATAAAGTACTTTCAGGATaGGACATGGGAGACCACATT +
Preference number: 4 (lower is better)
Translates to: RGETATASIAPEWKEKRHKVLSG*DMGDHI
Trigger: AATGTGGTCTCCCATGTCTCATCCTGAAAGTACTTT...ATGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCTATTGTCATGCATATTaGAGTGCCAGTAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: STITKGMVSPQDLSQRPAYCHAY*SASSPP
Trigger: TGGTGGACTACTGGCACTTCAATATGCATGACAATA...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp CGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCTTTCTTGAAATAAGGTaGCATGGTGCAGGTCAGATA +
Preference number: 4 (lower is better)
Translates to: RLELDQFSDLLSCHNICFFLEIR*HGAGQI
Trigger: TATCTGACCTGCACCATGTCACCTTATTTCAAGAAA...GAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR TCA 90 bp GAAAATAGCAAACTCAAAGGTCTGCGGGCTGTATCTCTTTCTCTCGTGGAGACTAGTTCCCATCGCATTTaGGCAATCTTTTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ENSKLKGLRAVSLSLVETSSHRI*AIFSSH
Trigger: GTGGGAGGAAAAGATTGCTCAAATGCGATGGGAACT...AGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGCTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp GAAAATAGCAAACTCAAAGGTCTGCGGGCTGTATCTCTTTCTCTCGTGGAGACTGTTGGATCAATTCAGTaGCCTCCTCTCTTGCCACAA +
Preference number: 4 (lower is better)
Translates to: ENSKLKGLRAVSLSLVETVGSIQ*PPLLPQ
Trigger: TTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAAC...AGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGCTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCATTCTCTCGTGGAGACTaGATGGGTGGGAGGATAAGA +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSFSRGD*MGGRIR
Trigger: TCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAA...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCGAGAGATTCTTAAAGTaGCTTAACGTGACTGGATCT +
Preference number: 4 (lower is better)
Translates to: RLELDQFSDLLSCHNICFERFLK*LNVTGS
Trigger: AGATCCAGTCACGTTAAGTCACTTTAAGAATCTCTC...GAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTCCTCTAAGAATATGCTaGTGTACAAAGAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSPLRIC*CTKKAR
Trigger: TCTTGCTTTCTTTGTACATCAGCATATTCTTAGAGG...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGAGCCTGGAATCAAGTTaGAATGAACCTAAAGCTATC +
Preference number: 4 (lower is better)
Translates to: SWINSVTSSLATTSASRGSLESS*NEPKAI
Trigger: GATAGCTTTAGGTTCATTTCAACTTGATTCCAGGCT...CCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR GCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCCTTAACTTCCTCCTCTaGTTCTTCCACAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSLNFLL*FFHSWS
Trigger: GCTCCAGCTGTGGAAGAAGCAGAGGAGGAAGTTAAG...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp CCATCTTCAAATCCTACAATAATTTGTGCTCCAGTGAAGTTTACCATTCGGGGTCGACCTAGTGATCCCTaGAGCTTGAGACCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: PSSNPTIICAPVKFTIRGRPSDP*SLRPVN
Trigger: GTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCG...ACCCCGAATGGTAAACTTCACTGGAGCACAAATTATTGTAGGATTTGAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR GCA 90 bp GAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTAAAACCAGCATAGAGTaGCTTTTCTTGCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EQSPPLRPKSFPPGVGSIKTSIE*LFLLLE
Trigger: CTCCAGGAGCAAGAAAAGGCACTCTATGCTGGTTTT...AATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR GCA 90 bp AGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGTTACAGGTGATTTGCTaGAATCATGAAACACAGCCT +
Preference number: 4 (lower is better)
Translates to: SWINSVTSSLATTSASRGLQVIC*NHETQP
Trigger: AGGCTGTGTTTCATGATTGCAGCAAATCACCTGTAA...CCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp CGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACTTCATGTGGAAGTaGAGCATGGTTTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RNPFRLELDQFSDLLSCHNFMWK*SMVFRK
Trigger: TTTCCTGAAAACCATGCTGCACTTCCACATGAAGTT...GTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR GCA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTGATGGCTGGATCCGGTaGTACGGGAAACATTTTCCT +
Preference number: 4 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPDGWIR*YGKHFP
Trigger: AGGAAAATGTTTCCCGTAGCACCGGATCCAGCCATC...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AGTTGTGGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCTTCAATAGCTCCTCAATAGCTCCAGAATaGAAGGAGAAGAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SCGHEISERRNSHGFNSSSIAPE*KEKRHS
Trigger: AGAATGCCTCTTCTCCTTCCATTCTGGAGCTATTGA...GGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCCACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465186.1
ENST00000488854.6
CDS-3UTR CCA 90 bp GTGATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGGTGAACTCAATAGCTCCAGAATaGAAGGAGAAGAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: VIVLPNRPSDPCSLRPVNSIAPE*KEKRHS
Trigger: AGAATGCCTCTTCTCCTTCCATTCTGGAGCTATTGA...GTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp GCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCAATGTCTTCTGGAATTaGCTCTGTTTCAATTCCAAA +
Preference number: 4 (lower is better)
Translates to: AVQGSCGHEISERRNSHGNVFWN*LCFNSK
Trigger: TTTGGAATTGAAACAGAGCCAATTCCAGAAGACATT...GCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCCACAACTGCCTTGGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp CCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGGCATTGCCATTTTTCTGATAAAGCTTTCTaGTGTGTTCTTTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PLLPQHLLPEGPGRHCHFSDKAF*CVLLSS
Trigger: TGAAGACAAAAGAACACACCAGAAAGCTTTATCAGA...AAAATGGCAATGCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CCA 90 bp GAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTGAAATCCTTTCCGCCTaGAGTTGGATCAATTCAGTG +
Preference number: 4 (lower is better)
Translates to: EQSPPLRPKSFPPGVGSIEILSA*SWINSV
Trigger: CACTGAATTGATCCAACTCCAGGCGGAAAGGATTTC...AATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTTTTCATAACAGAGGTTaGGTGCTGCAGTCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: KAEILSAWSWINSVTSSLFHNRG*VLQSVL
Trigger: TAGAACTGACTGCAGCACCCAACCTCTGTTATGAAA...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CCA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAACTTTCTGCACAGCACTaGAATCATAGCACTCAATGG +
Preference number: 4 (lower is better)
Translates to: PLLHSELRSLQKLWAIQELSAQH*NHSTQW
Trigger: CCATTGAGTGCTATGATTCCAGTGCTGTGCAGAAAG...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 72 bp ATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTaGAGACCGGTGAACGTAAAAGCCATTTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: IVLPNRPSDPCS*RPVNVKAISQN
Trigger: GTTCTGGGAAATGGCTTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488854.6
ENST00000489938.2
3UTR CAA 72 bp ATTCGGGGTACCCAAACAAGGGCAGTACCTCCTTGTTaGAATTTCATCTGGGCCAAAGGAGTTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: IRGTQTRAVPPC*NFIWAKGVLLA
Trigger: TGCTAGCAAAACTCCTTTGGCCCAGATGAAATTCAAACAAGGAGGTACTGCCCTTGTTTGGGTACCCCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488854.6
3UTR CAA 72 bp TACCATTCGGGGTACCCAAACAAGGGCAGTACCTCCTaGTTTGAATTTCATCTGGGCCAAAGGAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: YHSGYPNKGSTS*FEFHLGQRSFA
Trigger: AGCAAAACTCCTTTGGCCCAGATGAAATTCAAACAAGGAGGTACTGCCCTTGTTTGGGTACCCCGAATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp AATCAGAATCTCAGAATGGGAAGGAACCCATTCTACCAATCCTTCATTTGTCAGGGGACCATTGTGACATaGCTTGCTTGTCCCTCGACA +
Preference number: 4 (lower is better)
Translates to: NQNLRMGRNPFYQSFICQGTIVT*LACPST
Trigger: TGTCGAGGGACAAGCAAGTCATGTCACAATGGTCCC...CTGACAAATGAAGGATTGGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp ATAAGTGAGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAACATAAGCTAAAGCAGTaGCACAAGCAGTATGGGGTT +
Preference number: 4 (lower is better)
Translates to: ISERRNSHGFNSSRMEGEHKLKQ*HKQYGV
Trigger: AACCCCATACTGCTTGTGTCACTGCTTTAGCTTATG...TTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTCACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp CATGTGCTCAGGTATCTTGTAGTCTGGGGCTGTCTTCAGATTGAAATCTCCCATGGGCTGTCTTCAGATTaGAATCTCCCATATACACCT +
Preference number: 4 (lower is better)
Translates to: HVLRYLVVWGCLQIEISHGLSSD*NLPYTP
Trigger: AGGTGTATATGGGAGATTTCAATCTGAAGACAGCCC...ATGGGAGATTTCAATCTGAAGACAGCCCCAGACTACAAGATACCTGAGCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490481.1
CDS-3UTR TCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGCTATCTGGTGGAGCTTaGGCGGAATCACAACTAGCA +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKLSGGA*AESQLA
Trigger: TGCTAGTTGTGATTCCGCTCAAGCTCCACCAGATAG...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTTTAACAGAAAGCGTTTaGAGGGCTTCTAGATTTACC +
Preference number: 4 (lower is better)
Translates to: KAEILSAWSWINSVTSSLLTESV*RASRFT
Trigger: GGTAAATCTAGAAGCCCTTCAAACGCTTTCTGTTAA...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCAAGTTCCCATCGCATTTaGGCAATCTTTTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSSSHRI*AIFSSH
Trigger: GTGGGAGGAAAAGATTGCTCAAATGCGATGGGAACT...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGGAACCAAGGCATTGCCCTGCTaGTTCTGTAGTGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: QLCLDSCRTHYRLVHKGTKALPC*FCSVFN
Trigger: GTTGAATACACTACAGAATCAGCAGGGCAATGCCTT...GGTTCCCTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGGAACCTGCTCCACTCAGAACTaGGGAGTCTACAAAAACTGT +
Preference number: 4 (lower is better)
Translates to: QLCLDSCRTHYRLVHKGTCSTQN*GVYKNC
Trigger: ACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCA...GGTTCCCTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTAGCCATGAACTTCAATaGGCACTTACCCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGSHELQ*ALTPKP
Trigger: TGGTTTGGGGGTAAGTGCTCATTGAAGTTCATGGCT...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp CGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCTCTCCAGTAGAGAAGTaGCTACATCAGAAATTAATG +
Preference number: 4 (lower is better)
Translates to: RLELDQFSDLLSCHNICFSPVEK*LHQKLM
Trigger: CATTAATTTCTGATGTAGTCACTTCTCTACTGGAGA...GAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR TCA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTACGCTATGTCACTTCTaGGCTTGGGCTGTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPTLCHF*AWAVKD
Trigger: GTCTTTTACAGCCCAAGCTCAGAAGTGACATAGCGT...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCAACGCTATGTCACTTCTaGGCTTGGGCTGTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSTLCHF*AWAVKD
Trigger: GTCTTTTACAGCCCAAGCTCAGAAGTGACATAGCGT...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTAGCTTTCCTCTCAGTTaGAATGCACAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGSFPLS*NAQQVL
Trigger: CAGGACTTGCTGTGCATTTCAACTGAGAGGAAAGCT...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp TACGCAAAAGAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTTTTCCAGGGTTCTGCTaGTTCTGTAGTGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: YAKEQSPPLRPKSFPPGVFPGFC*FCSVFN
Trigger: GTTGAATACACTACAGAATCAGCAGAACCCTGGAAA...AACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTCTTTTGCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR GCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTTGCTGATCATGAGCTaGCGGACTGTTTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSLLIMS*RTVSSI
Trigger: AATGGAGGAAACAGTCCGGCAGCTCATGATCAGCAA...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCAGCAAACTCAAAGGTCTaGGGGCTGTATCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSANSKV*GLYLFL
Trigger: GAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGC...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCGCAAACTCAAAGGTCTaGGGGCTGTATCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSANSKV*GLYLFL
Trigger: GAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGC...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCAGTGAATGTCAGTTGTaGTTGGATTCATGCAGAACA +
Preference number: 4 (lower is better)
Translates to: STITKGMVSPQDLSQRPASECQL*LDSCRT
Trigger: TGTTCTGCATGAATCCAAGCACAACTGACATTCACT...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTGGCCCTGGAAGGCATTaGCATTTTAAACAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLGPGRH*HFKQVP
Trigger: GGGAACTTGTTTAAAATGGCAATGCCTTCCAGGGCC...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CCA 90 bp AGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGCATTCAGTATCCTGATCATCTaGTTCCTTCATTTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: RRNSHGFNSSRMEGEEAFSILII*FLHFLE
Trigger: TTCGAGGAAATGAAGGAACCAGATGATCAGGATACT...GAATGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp TCAGTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGTCGAAGGACTCTGTATaGTCTCAGAGAAGGATATTC +
Preference number: 4 (lower is better)
Translates to: SVVIVLPNRPSDPCSLRPSKDSV*SQRRIF
Trigger: GAATATCCTTCTCTGAGACCATACAGAGTCCTTCGA...CGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488854.6
ENST00000489938.2
CDS-3UTR CCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGGAGCACCTTCCCATCTaGGAGCTCCATGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMREHLPI*ELHVAF
Trigger: GAAGGCTACATGGAGCTCCCAGATGGGAAGGTGCTC...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGGTGCTTTATGGTTGGAAGTaGAGCTTCAAGAATATAGCC +
Preference number: 4 (lower is better)
Translates to: VVIVLPNRPSDPCSLRPVLYGWK*SFKNIA
Trigger: GGCTATATTCTTGAAGCTCCACTTCCAACCATAAAG...CACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTCCAAACCTGGGAGATaGAACTTTGGCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSSKPGR*NFGLHV
Trigger: GACATGAAGGCCAAAGTTCCATCTCCCAGGTTTGGA...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GAAAATAGCAAACTCAAAGGTCTGCGGGCTGTATCTCTTTCTCTCGTGGAGACTACATACTCTATCTGGTaGAGCTTGAGCGGAATCACA +
Preference number: 4 (lower is better)
Translates to: ENSKLKGLRAVSLSLVETTYSIW*SLSGIT
Trigger: TGTGATTCCGCTCAAGCTCCACCAGATAGAGTATGT...AGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGCTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CCA 90 bp TACGCAAAAGAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTTTGGAATTTTCCTCCTaGAGCTCATGGATTCGTTCT +
Preference number: 4 (lower is better)
Translates to: YAKEQSPPLRPKSFPPGVLEFSS*SSWIRS
Trigger: AGAACGAATCCATGAGCTCCAGGAGGAAAATTCCAA...AACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTCTTTTGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CCA 90 bp ATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTGGAATTTTCCTCCTaGAGCTCATGGATTCGTTCT +
Preference number: 4 (lower is better)
Translates to: IPGPQKPSHSWVRSQVCCLEFSS*SSWIRS
Trigger: AGAACGAATCCATGAGCTCCAGGAGGAAAATTCCAA...ACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTTCTGATAAAGCTTTCTaGTGTGTTCTTTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSSDKAF*CVLLSS
Trigger: TGAAGACAAAAGAACACACCAGAAAGCTTTATCAGA...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAAAATAGCAAACTCAAAGGTCTGCGGGCTGTATCTCTTTCTCTCGTGGAGACTAGTCTACAAAAACTGTaGGCAATCCAAGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ENSKLKGLRAVSLSLVETSLQKL*AIQEGW
Trigger: CCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACT...AGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTTTGCTATTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGCAGCCAAGCTTCAGATaGCTGCAGCCCCAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLQPSFR*LQPQLL
Trigger: TAGGAGCTGGGGCTGCAGCCATCTGAAGCTTGGCTG...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp ATGGGTGGGAGGATAAGACTGCCTTTCCTACGCAAAAGAGCAATCTCCTCCTTTATCAGAATCTCAGAATaGGAAGGAACCCATTCTACC +
Preference number: 4 (lower is better)
Translates to: MGGRIRLPFLRKRAISSFIRISE*EGTHST
Trigger: GGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGAT...AAAGGAGGAGATTGCTCTTTTGCGTAGGAAAGGCAGTCTTATCCTCCCACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR CCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTGACAGACTCCTAACCTaGGGCCTCTGCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRDRLLT*GLCSGR
Trigger: CCTGCCACTGCAGAGGCCCCAGGTTAGGAGTCTGTC...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AAAATCATAGATTCGAACAGAGCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTGGAGAAGAGGCATTCTaGGTCCTGGGTCTGAGAATA +
Preference number: 4 (lower is better)
Translates to: KIIDSNRAVQGSCGHEISGEEAF*VLGLRI
Trigger: TATTCTCAGACCCAGGACCCAGAATGCCTCTTCTCC...ACTTATCTCATGGCCACAACTGCCTTGGACTGCTCTGTTCGAATCTATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465186.1
3UTR CAA 72 bp GGGCACATTAGCAGGCTAATCACAGGTGAGGAAGACTaGGCATTGCTGAGTTCCCTTCTACATTTATGCAAT +
Preference number: 4 (lower is better)
Translates to: GHISRLITGEED*ALLSSLLHLCN
Trigger: ATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACCTGTGATTAGCCTGCTAATGTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 72 bp TGTATACATCATTCTCTCTTGCTGTCTCCCTCACTCTaGGATCACTTGCTCTGGGAGAAGTCATATCCCAAG +
Preference number: 4 (lower is better)
Translates to: CIHHSLLLSPSL*DHLLWEKSYPK
Trigger: CTTGGGATATGACTTCTCCCAGAGCAAGTGATCCAAGAGTGAGGGAGACAGCAAGAGAGAATGATGTATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp ATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTAAGAATGTACAAGTGTaGGAAGATCCAGTGGTATGT +
Preference number: 4 (lower is better)
Translates to: IPGPQKPSHSWVRSQVCCKNVQV*EDPVVC
Trigger: ACATACCACTGGATCTTCTCACACTTGTACATTCTT...ACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTCATAAGCTAAAGCAGTaGCACAAGCAGTATGGGGTT +
Preference number: 4 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLHKLKQ*HKQYGV
Trigger: AACCCCATACTGCTTGTGTCACTGCTTTAGCTTATG...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAATCTAGTTTTAGTTTCTaGTGTCTAAGGAGACGGAGT +
Preference number: 4 (lower is better)
Translates to: PLLHSELRSLQKLWAIQESSFSF*CLRRRS
Trigger: ACTCCGTCTCCTTAGACATCAGAAACTAAAACTAGA...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000461734.1
CDS-3UTR TCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGAGTTCCCATCGCATTTaGGCAATCTTTTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKSSHRI*AIFSSH
Trigger: GTGGGAGGAAAAGATTGCTCAAATGCGATGGGAACT...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGTTGGATCAATTCAGTaGCCTCCTCTCTTGCCACAA +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKVGSIQ*PPLLPQ
Trigger: TTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAAC...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AAACTCAAAGGTCTGCGGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGCAAAACACTGCTTTATaGAGTCAACAATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: KLKGLRAVSLSLVETEWVQNTAL*SQQCQN
Trigger: GTTTTGGCATTGTTGACTTCATAAAGCAGTGTTTTG...CACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCCGCAGACCTTTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTGTATTTCCTGAATCCTaGGCCCTCAAAACACTGCTT +
Preference number: 4 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLVFPES*ALKTLL
Trigger: AAGCAGTGTTTTGAGGGCTCAGGATTCAGGAAATAC...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGATTCCAAATGTCAGTaGGATTATCCTGCAATGGTT +
Preference number: 4 (lower is better)
Translates to: PLLHSELRSLQKLWAIQEDSKCQ*DYPAMV
Trigger: AACCATTGCAGGATAATCTCACTGACATTTGGAATC...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGAGCACCTGCTATTCCTaGCTTCTGCATCCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKSTCYS*LLHPFS
Trigger: GGAAAAAGGATGCAGAAGTCAGGAATAGCAGGTGCT...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGCATTGTGACATGACTTaGTTGTCCCTCGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLHCDMT*LSLDRA
Trigger: AGCTCTGTCGAGGGACAAGCAAGTCATGTCACAATG...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCGACATAGACTCGAATTaGTCCATTTTTCATTCCACA +
Preference number: 4 (lower is better)
Translates to: STITKGMVSPQDLSQRPADIDSN*SIFHST
Trigger: TGTGGAATGAAAAATGGAGCAATTCGAGTCTATGTC...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCAAAAACCAGCATAGAGTaGCTTTTCTTGCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSKTSIE*LFLLLE
Trigger: CTCCAGGAGCAAGAAAAGGCACTCTATGCTGGTTTT...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGCAGGGCCTCCTCTGCTaGATTCAGATTAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRQGLLC*IQISCH
Trigger: GTGGCAACTAATCTGAATGCAGCAGAGGAGGCCCTG...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000461734.1
CDS-3UTR GCA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGCTCCAGGGCCTCCTCTaGTGCATTCAGATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMLQGLL*CIQISC
Trigger: GCAACTAATCTGAATGCAGCAGAGGAGGCCCTGGAG...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGTTGCTGATCATGAGCTaGCGGACTGTTTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKLLIMS*RTVSSI
Trigger: AATGGAGGAAACAGTCCGGCAGCTCATGATCAGCAA...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp TACGCAAAAGAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTTTACAGGTGATTTGCTaGAATCATGAAACACAGCCT +
Preference number: 4 (lower is better)
Translates to: YAKEQSPPLRPKSFPPGVLQVIC*NHETQP
Trigger: AGGCTGTGTTTCATGATTGCAGCAAATCACCTGTAA...AACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTCTTTTGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGGCTGGTTATTTTCCTaGTTTCTGCCAACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKGWLFS*FLPTQS
Trigger: GCTTTGGGTTGGCAGAAAGCAGGAAAATAACCAGCC...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTCACTCTTGGATCACTTaGTCTGGGAGAAGTCATATC +
Preference number: 4 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGHSWIT*SGRSHI
Trigger: GATATGACTTCTCCCAGAGCAAGTGATCCAAGAGTG...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTTCCTCTCAGTTGAAATaGACAGCAAGTCCTGATGTG +
Preference number: 4 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGSSQLK*TASPDV
Trigger: CACATCAGGACTTGCTGTGCATTTCAACTGAGAGGA...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGCAAATCGTGAGCCCTTTTaGATCATAAAGTTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: ERRNSHGFNSSRMEGEEANREPF*IIKFKN
Trigger: ATTCTTGAACTTTATGATCCAAAAGGGCTCACGATT...TGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp AGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAAGGAGAAGAGGCATTTCTTGCTTTATGGTTaGAAGTGGAGCTTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: RGETATASIAPEWKEKRHFLLYG*KWSFKN
Trigger: ATTCTTGAAGCTCCACTTCCAACCATAAAGCAAGAA...ATGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp CAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGGAACCGAATGGGTATGTGCTTaGATATGTGAAGAGTCGACT +
Preference number: 4 (lower is better)
Translates to: QLCLDSCRTHYRLVHKGTEWVCA*ICEEST
Trigger: AGTCGACTCTTCACATATCCAAGCACATACCCATTC...GGTTCCCTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGTATCTCTTTCTCTCGTaGAGACTGAATGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLYLFLS*RLNGWE
Trigger: CTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATA...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGGGCCCACAGATAAGCTaGCAAGAGGAAGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLGPQIS*QEEGSQ
Trigger: CTGGGATCCTTCCTCTTGCCAGCTTATCTGTGGGCC...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 72 bp TTTATAATTCTGGAGAGACATAAGGAGTCCTACCCGTaGAGGTTGGAGAGGGAAAATAAAGAAGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: FIILERHKESYP*RLERENKEAAT
Trigger: GGTGGCAGCTTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTTATGTCTCTCCAGAATTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTAAAGTACTTTCAGGATaGGACATGGGAGACCACATT +
Preference number: 4 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGKVLSG*DMGDHI
Trigger: AATGTGGTCTCCCATGTCTCATCCTGAAAGTACTTT...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCGCTTGGTTTTCTCTCTaGTTGACTAGCTCGTTTGAA +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSAWFSL*LTSSFE
Trigger: TTCAAACGAGCTAGTCAATCAGAGAGAAAACCAAGC...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGTCTTCTGGGTGTATCTaGGGAATTTTGGGAATGGGT +
Preference number: 4 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLSSGCI*GILGMG
Trigger: ACCCATTCCCAAAATTCCTCAGATACACCCAGAAGA...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp CAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGGAACCAGACAGAACTTCCAGTaGGTTATGTCAGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: QLCLDSCRTHYRLVHKGTRQNFQ*VMSEIL
Trigger: CAAGATTTCTGACATAACTCACTGGAAGTTCTGTCT...GGTTCCCTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTGAAAACTTAGAATTCTaGCGGAGTTGCAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: EQSPPLRPKSFPPGVGSIENLEF*RSCRNL
Trigger: AAGATTTCTGCAACTCCGTCAGAATTCTAAGTTTTC...AATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR TCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGGCAACTCCTTTACTCTaGAGTTGTGACAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRATPLL*SCDRGA
Trigger: AGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGC...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGAGGGAAGAGTCACTCTaGCTGTTTAGGGCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMREESL*LFRASA
Trigger: TGCACTTGCCCTAAACAGTCAGAGTGACTCTTCCCT...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp ATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTCATTGCCAGAGTAGTTaGCTCACTAGTTTAAAATCA +
Preference number: 4 (lower is better)
Translates to: IPGPQKPSHSWVRSQVCCHCQSS*LTSLKS
Trigger: TGATTTTAAACTAGTGAGTCAACTACTCTGGCAATG...ACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp ATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTCAACTGGACTTGAGATaGAGTTTAGGTCATATTGAA +
Preference number: 4 (lower is better)
Translates to: IPGPQKPSHSWVRSQVCCQLDLR*SLGHIE
Trigger: TTCAATATGACCTAAACTTCATCTCAAGTCCAGTTG...ACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGTTCCTAAGATGCCCATaGGAACAGACCAAGATGTGT +
Preference number: 4 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLFLRCP*EQTKMC
Trigger: ACACATCTTGGTCTGTTCTCATGGGCATCTTAGGAA...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGAGGAGTCCTACCCGTTaGGGTTGGAGAGGGAAAATA +
Preference number: 4 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMRSPTR*GWRGKI
Trigger: TATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCT...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTAAAGATATTGCCATCTaGTCCAGCAGTCACCAAGAA +
Preference number: 4 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPKDIAI*SSSHQE
Trigger: TTCTTGGTGACTGCTGGAGCAGATGGCAATATCTTT...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp AATCAGAATCTCAGAATGGGAAGGAACCCATTCTACCAATCCTTCATTTGTCAGGGCTGGTTATTTTCCTaGTTTCTGCCAACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: NQNLRMGRNPFYQSFICQGWLFS*FLPTQS
Trigger: GCTTTGGGTTGGCAGAAAGCAGGAAAATAACCAGCC...CTGACAAATGAAGGATTGGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGCCAGAAGTTGTAGGTTaGCTCGCTTTCTACAGTCAT +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKPEVVG*LAFYSH
Trigger: ATGACTGTAGAAAGCGAGCCAACCTACAACTTCTGG...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAATTCAGAAAGATCAGTTaGTTCCCAGCTATGTATATG +
Preference number: 4 (lower is better)
Translates to: PLLHSELRSLQKLWAIQEFRKIS*FPAMYM
Trigger: CATATACATAGCTGGGAACCAACTGATCTTTCTGAA...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTTGGGAGATGGAACTTTaGCCTTCATGTCTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPWEMEL*PSCLSL
Trigger: TAAGGAAAGACATGAAGGCCAAAGTTCCATCTCCCA...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GATAGTCAGTGTGTAGTCAGGGTTACTACCAACAGAGGCCAGCAAGTTACCGCTATCTTCAATGTCTTCTaGAATTGGCTCTGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: DSQCVVRVTTNRGQQVTAIFNVF*NWLCFN
Trigger: ATTGAAACAGAGCCAATTCCAGAAGACATTGAAGAT...AGCGGTAACTTGCTGGCCTCTGTTGGTAGTAACCCTGACTACACACTGACTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGCAGCTCCACATCCGTTaGCTCTGCTTTTTCAAATTC +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKQLHIR*LCFFKF
Trigger: GAATTTGAAAAAGCAGAGCCAACGGATGTGGAGCTG...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGACATACTCTATCTGGTaGAGCTTGAGCGGAATCACA +
Preference number: 4 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLTYSIW*SLSGIT
Trigger: TGTGATTCCGCTCAAGCTCCACCAGATAGAGTATGT...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTTTTCATAACAGAGGTTaGGTGCTGCAGTCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPFHNRG*VLQSVL
Trigger: TAGAACTGACTGCAGCACCCAACCTCTGTTATGAAA...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGAGTCTACAAAAACTGTaGGCAATCCAAGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKSLQKL*AIQEGW
Trigger: CCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACT...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTTCATCGGTGATACTATaGATGACAGTTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLSSVIL*MTVQKS
Trigger: GCTCTTCTGAACTGTCATCCATAGTATCACCGATGA...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGAGAAATTTAGCACATaGCTCACAGACCTCCCTAAG +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKEKFST*LTDLPK
Trigger: CTTAGGGAGGTCTGTGAGCCATGTGCTAAATTTCTC...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCAGAGAGAACTTCATGTaGAAGTGCAGCATGGTTTTC +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSRENFM*KCSMVF
Trigger: GAAAACCATGCTGCACTTCCACATGAAGTTCTCTCT...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCCCACACATGGACATATaGTGCATAATAAATTCACTT +
Preference number: 4 (lower is better)
Translates to: STITKGMVSPQDLSQRPAPHMDI*CIINSL
Trigger: AAGTGAATTTATTATGCACCATATGTCCATGTGTGG...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 72 bp ATTAGCAGGCTAATCACAGGTGAGGAAGACTTGGCATaGCTGAGTTCCCTTCTACATTTATGCAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: ISRLITGEEDLA*LSSLLHLCNVP
Trigger: AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACCTGTGATTAGCCTGCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
3UTR CAA 72 bp CCATATGACAATAGTGACGCTATGTCACTTCTGAGCTaGGGCTGTAAAAGACTGTGGCTCTTGTATACATCA +
Preference number: 4 (lower is better)
Translates to: PYDNSDAMSLLS*GCKRLWLLYTS
Trigger: TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGCGTCACTATTGTCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp ATCATAGATTCGAACAGAGCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTGAGGTCCTGGGTAATATTTaGAAAACTAAGGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: IIDSNRAVQGSCGHEISEVLGNI*KTKVKL
Trigger: AAGCTTGACCTTAGTTTTTCAAATATTACCCAGGAC...CTCACTTATCTCATGGCCACAACTGCCTTGGACTGCTCTGTTCGAATCTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGGATGGGAGAGGGGGTTaGCGGAATAAATATTTCAGG +
Preference number: 4 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMDGRGG*RNKYFR
Trigger: CCTGAAATATTTATTCCGTCAACCCCCTCTCCCATC...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTCACTCAGTATGGCATaGACCACAATAGTATCACTT +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSSLSMA*TTIVSL
Trigger: AAGTGATACTATTGTGGTTCATGCCATACTGAGTGA...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCATCTAGTTTTAGTTTCTaGTGTCTAAGGAGACGGAGT +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSSSFSF*CLRRRS
Trigger: ACTCCGTCTCCTTAGACATCAGAAACTAAAACTAGA...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGCTTTTCTCTCGAAGGTaGAGGGCCAGCTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMLFSRR*RASSKR
Trigger: TCTTTTTGAGCTGGCCCTTCACCTTCGAGAGAAAAG...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCATTAACAGAAAGCGTTTaGAGGGCTTCTAGATTTACC +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSLTESV*RASRFT
Trigger: GGTAAATCTAGAAGCCCTTCAAACGCTTTCTGTTAA...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTCCTTTCGAAGTTTTCTaGTCTTCAGTTCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLPFEVF*SSVLQV
Trigger: CACTTGAAGAACTGAAGATCAGAAAACTTCGAAAGG...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTAGACAGAACTTCCAGTaGGTTATGTCAGAAATCTTG +
Preference number: 4 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGRQNFQ*VMSEIL
Trigger: CAAGATTTCTGACATAACTCACTGGAAGTTCTGTCT...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGGATTTGCTGCAATCATaGAACACAGCCTTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRDLLQS*NTAFRD
Trigger: GTCTCGGAAGGCTGTGTTTCATGATTGCAGCAAATC...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCACAGGTCCATCAGAAATaGGATCTGAAAAAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSQVHQK*DLKKVV
Trigger: TACTACCTTTTTCAGATCTCATTTCTGATGGACCTG...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAATCCTACAATAATTTGTaGTCCAGTGAAGTTTACCAT +
Preference number: 4 (lower is better)
Translates to: PLLHSELRSLQKLWAIQESYNNL*SSEVYH
Trigger: ATGGTAAACTTCACTGGAGCACAAATTATTGTAGGA...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGCTCAAAGCTTTGATTTaGTCTCTCTTCCGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKLKALI*SLFRAF
Trigger: AAAGGCACGGAAGAGAGAGCAAATCAAAGCTTTGAG...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp TGTCTTCAGATTGAAATCTCCCATATACACCTGGGCTTCTTTGATGGCTTGAAGCTCAAAGCTTTGATTTaGTCTCTCTTCCGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CLQIEISHIHLGFFDGLKLKALI*SLFRAF
Trigger: AAAGGCACGGAAGAGAGAGCAAATCAAAGCTTTGAG...CTTCAAGCCATCAAAGAAGCCCAGGTGTATATGGGAGATTTCAATCTGAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490481.1
CDS-3UTR GCA 90 bp GAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTATATTACAGGTGATTTaGTGCAATCATGAAACACAG +
Preference number: 4 (lower is better)
Translates to: EQSPPLRPKSFPPGVGSIILQVI*CNHETQ
Trigger: CTGTGTTTCATGATTGCAGCAAATCACCTGTAATAT...AATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTGACGCTCTCAGTCATTaGTTTGCTATCCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRDALSH*FAIQRP
Trigger: GGGCCTCTGGATAGCAAAGCAATGACTGAGAGCGTC...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGTCGAAGGACTCTGTATaGTCTCAGAGAAGGATATTC +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKSKDSV*SQRRIF
Trigger: GAATATCCTTCTCTGAGACCATACAGAGTCCTTCGA...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GGGTCCTGGGTAATATTTGAAAAACTAAGGTCAAGCTTCCATATGGCTCCATTGGTGACACAAGCAGTATaGGGTTTGAAAACCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GSWVIFEKLRSSFHMAPLVTQAV*GLKTCF
Trigger: GAAACAGGTTTTCAAACCCCATACTGCTTGTGTCAC...CAATGGAGCCATATGGAAGCTTGACCTTAGTTTTTCAAATATTACCCAGGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGACCACATACTCTATCTaGTGGAGCTTGAGCGGAATC +
Preference number: 4 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRTTYSI*WSLSGI
Trigger: GATTCCGCTCAAGCTCCACCAGATAGAGTATGTGGT...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000461734.1
CDS-3UTR CCA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGTTGGAATTTTCCTCCTaGAGCTCATGGATTCGTTCT +
Preference number: 4 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLLEFSS*SSWIRS
Trigger: AGAACGAATCCATGAGCTCCAGGAGGAAAATTCCAA...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTCTGTCCCCAGATTCCTaGACCTCAGAAACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRLSPDS*TSETLS
Trigger: TGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGACAG...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp ATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTCCACACATGGACATATaGTGCATAATAAATTCACTT +
Preference number: 4 (lower is better)
Translates to: IPGPQKPSHSWVRSQVCCPHMDI*CIINSL
Trigger: AAGTGAATTTATTATGCACCATATGTCCATGTGTGG...ACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGTTAATGGGACCATTGTaGCATGACTTGCTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRLMGPL*HDLLVP
Trigger: AGGGACAAGCAAGTCATGTCACAATGGTCCCATTAA...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGGTTTTCTCTCTGATTaGCTAGCTCGTTTGAATTTG +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKGFLSD*LARLNL
Trigger: CAAATTCAAACGAGCTAGTCAATCAGAGAGAAAACC...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTTTCTCTCGTGGAGACTaGATGGGTGGGAGGATAAGA +
Preference number: 4 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRFSRGD*MGGRIR
Trigger: TCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAA...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCCAAAACACTGCTTTATaGAGTCAACAATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSQNTAL*SQQCQN
Trigger: GTTTTGGCATTGTTGACTTCATAAAGCAGTGTTTTG...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR TCA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTGAAAACTTAGAATTCTaGCGGAGTTGCAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPENLEF*RSCRNL
Trigger: AAGATTTCTGCAACTCCGTCAGAATTCTAAGTTTTC...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCACATTGCCAGAGTAGTTaGCTCACTAGTTTAAAATCA +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSHCQSS*LTSLKS
Trigger: TGATTTTAAACTAGTGAGTCAACTACTCTGGCAATG...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCCAGTCTCTGAGTATTTaGAGAAAATACCCACTTACA +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSQSLSI*RKYPLT
Trigger: TGTAAGTGGGTATTTTCTTCAAATACTCAGAGACTG...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGCAATTCCTTCACCACTaGTACTTCGCAGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRQFLHH*YFAGRS
Trigger: AGATCTACCTGCGAAGTAGCAGTGGTGAAGGAATTG...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp CATGAGATAAGTGAGAGGAGAAACAGCCACGGCTTCAATAGCTCCAGAATGGAATCCTACAATAATTTGTaGTCCAGTGAAGTTTACCAT +
Preference number: 4 (lower is better)
Translates to: HEISERRNSHGFNSSRMESYNNL*SSEVYH
Trigger: ATGGTAAACTTCACTGGAGCACAAATTATTGTAGGA...TTCCATTCTGGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTCACTTATCTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR GCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTCAGTGAGATTATCCTaGAATGGTTATAGCCATGAA +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSSVRLS*NGYSHE
Trigger: TTCATGGCTATAACCATTGCAGGATAATCTCACTGA...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGAGTATCCTGATCATCTaGTTCCTTCATTTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLSILII*FLHFLE
Trigger: TTCGAGGAAATGAAGGAACCAGATGATCAGGATACT...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp AATCGTGAGCCCTTTTGGATCATAAAGTTCAAGAATTCGAACAACTCCATCTTCGATCTTTACTCCCTGTaGCTAGAATTTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: NREPFWIIKFKNSNNSIFDLYSL*LEFPHH
Trigger: GTGATGGGGAAATTCTAGCCACAGGGAGTAAAGATC...GAAGATGGAGTTGTTCGAATTCTTGAACTTTATGATCCAAAAGGGCTCACGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCATTCTTGCTTTATGGTTaGAAGTGGAGCTTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSFLLYG*KWSFKN
Trigger: ATTCTTGAAGCTCCACTTCCAACCATAAAGCAAGAA...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp CAGATTGAAATCTCCCATATACACCTGGGCTTCTTTGATGGCTTGAAGATCTTTAGGTATCTTGTAGTCTaGGGCTGTCTTCAGATTGAA +
Preference number: 4 (lower is better)
Translates to: QIEISHIHLGFFDGLKIFRYLVV*GCLQIE
Trigger: TTCAATCTGAAGACAGCCCCAGACTACAAGATACCT...AAAGATCTTCAAGCCATCAAAGAAGCCCAGGTGTATATGGGAGATTTCAATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490481.1
CDS-3UTR CCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGAGTCTACAAAAACTGTaGGCAATCCAAGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRSLQKL*AIQEGW
Trigger: CCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACT...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGCTTGAAAGGCACACATaGCTTAGGATATACAACACA +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKLERHT*LRIYNT
Trigger: TGTGTTGTATATCCTAAGCCATGTGTGCCTTTCAAG...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCAATGTCAGTTGTGCTTaGATTCATGCAGAACACATT +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSNVSCA*IHAEHI
Trigger: AATGTGTTCTGCATGAATCCAAGCACAACTGACATT...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCAAATGTCAGTTGTGCTTaGATTCATGCAGAACACATT +
Preference number: 4 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSNVSCA*IHAEHI
Trigger: AATGTGTTCTGCATGAATCCAAGCACAACTGACATT...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGTCTCCAGTAGAGAAGTaGCTACATCAGAAATTAATG +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKSPVEK*LHQKLM
Trigger: CATTAATTTCTGATGTAGTCACTTCTCTACTGGAGA...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGAAGAGCCAAGTTATATaGACAATTGACCCACAAGTA +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKKSQVI*TIDPQV
Trigger: TACTTGTGGGTCAATTGTTCATATAACTTGGCTCTT...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR TCA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGCAGTCTCTGAGTATTTaGAGAAAATACCCACTTACA +
Preference number: 4 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKQSLSI*RKYPLT
Trigger: TGTAAGTGGGTATTTTCTTCAAATACTCAGAGACTG...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTTTGACCAAATACTGTTaGATGTACACGTGTTTAATC +
Preference number: 4 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPLTKYC*MYTCLI
Trigger: GATTAAACACGTGTACATGCAACAGTATTTGGTCAA...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCATATTACAGGTGATTTaGTGCAATCATGAAACACAG +
Preference number: 4 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSILQVI*CNHETQ
Trigger: CTGTGTTTCATGATTGCAGCAAATCACCTGTAATAT...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGGCTATTCCTGACTTCTaGATCCTTTTTCCATCAAGC +
Preference number: 4 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMAIPDF*ILFPSS
Trigger: GCTTGATGGAAAAAGGATGCAGAAGTCAGGAATAGC...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGTACTGTTTAGCTAAGTaGTGTGCCACACATGGACAT +
Preference number: 4 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRYCLAK*CATHGH
Trigger: ATGTCCATGTGTGGCACAGCACTTAGCTAAACAGTA...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTTCCATATGGCTCCATTaGCATCCTGAGCCAACCAAA +
Preference number: 4 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRSIWLH*HPEPTK
Trigger: TTTGGTTGGCTCAGGATGCCAATGGAGCCATATGGA...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTAATCGTGAGCCCTTTTaGATCATAAAGTTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPNREPF*IIKFKN
Trigger: ATTCTTGAACTTTATGATCCAAAAGGGCTCACGATT...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
3UTR CAA 72 bp AATTCGAACAACTCCATCTTCAAATCCTACAATAATTaGTGCTCCAGTGAAGTTTACCATTCGGGGTACCCA +
Preference number: 4 (lower is better)
Translates to: NSNNSIFKSYNN*CSSEVYHSGYP
Trigger: TGGGTACCCCGAATGGTAAACTTCACTGGAGCACAAATTATTGTAGGATTTGAAGATGGAGTTGTTCGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTTCCCCATCAGTATCCTaGTCATCTGGTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRSPSVS*SSGSFI
Trigger: AATGAAGGAACCAGATGATCAGGATACTGATGGGGA...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGAAAGCTGTTTTTCTGTaGATCTCAGCACGGATTTGG +
Preference number: 4 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLKAVFL*ISARIW
Trigger: CCAAATCCGTGCTGAGATGCACAGAAAAACAGCTTT...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR GCA 90 bp CTTGAAGATCTTTGGGATCTTCATAGTCATCACCAGGTTTACTCTTGTATAGTTAAAGCTGTTTTTCTGTaGATCTCAGCACGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LEDLWDLHSHHQVYSCIVKAVFL*ISARIW
Trigger: CCAAATCCGTGCTGAGATGCACAGAAAAACAGCTTT...AACTATACAAGAGTAAACCTGGTGATGACTATGAAGATCCCAAAGATCTTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490481.1
CDS-3UTR CCA 90 bp TTTGATTTCATAGGAGACTACATCATGATCATCCTCTTCTTGCTTTATGGTTGGTCGAAGGACTCTGTATaGTCTCAGAGAAGGATATTC +
Preference number: 4 (lower is better)
Translates to: FDFIGDYIMIILFLLYGWSKDSV*SQRRIF
Trigger: GAATATCCTTCTCTGAGACCATACAGAGTCCTTCGA...CCAACCATAAAGCAAGAAGAGGATGATCATGATGTAGTCTCCTATGAAATCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTTCAATTCCAAACCTaGGAGATGGAACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLFQFQT*EMELWP
Trigger: AGGCCAAAGTTCCATCTCCCAGGTTTGGAATTGAAA...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CCA 90 bp GAAGATCTTTGGGATCTTCATAGTCATCACCAGGTTTACTCTTGTATAGTTCCTTGGCTTGAAGATCTTTaGGATCTTCATAGTCATCAC +
Preference number: 4 (lower is better)
Translates to: EDLWDLHSHHQVYSCIVPWLEDL*DLHSHH
Trigger: GTGATGACTATGAAGATCCCAAAGATCTTCAAGCCA...AGGAACTATACAAGAGTAAACCTGGTGATGACTATGAAGATCCCAAAGATCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490481.1
CDS-3UTR CCA 90 bp AATCAGAATCTCAGAATGGGAAGGAACCCATTCTACCAATCCTTCATTTGTCAGCTGAAATCTCTTTTCTaGAACTTCTTCTGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: NQNLRMGRNPFYQSFICQLKSLF*NFFWVY
Trigger: ATACACCCAGAAGAAGTTCCAGAAAAGAGATTTCAG...CTGACAAATGAAGGATTGGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
3UTR CAA 72 bp AGACTACATCATGATCATCCTCTTCTTGCTTTATGGTaGGAAGTGGAGCTTCAAGAATATAGCCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: RLHHDHPLLALW*EVELQEYSHFH
Trigger: GTGAAAATGGCTATATTCTTGAAGCTCCACTTCCAACCATAAAGCAAGAAGAGGATGATCATGATGTAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp GAAGATCTTTGGGATCTTCATAGTCATCACCAGGTTTACTCTTGTATAGTTCCTCCACTTGTTGAATTTTaGAAGCTGTTTTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: EDLWDLHSHHQVYSCIVPPLVEF*KLFFCA
Trigger: TGCACAGAAAAACAGCTTTCAAAATTCAACAAGTGG...AGGAACTATACAAGAGTAAACCTGGTGATGACTATGAAGATCCCAAAGATCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490481.1
CDS-3UTR GCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTGCTATTCCTGACTTCTaGATCCTTTTTCCATCAAGC +
Preference number: 4 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRAIPDF*ILFPSS
Trigger: GCTTGATGGAAAAAGGATGCAGAAGTCAGGAATAGC...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGCACATGGACATATGGTaGATAATAAATTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRHMDIW*IINSLP
Trigger: GGGAAGTGAATTTATTATGCACCATATGTCCATGTG...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGTTGTGCTTGGATTCATaGAGAACACATTACCGTTTA +
Preference number: 4 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRLCLDS*RTHYRL
Trigger: TAAACGGTAATGTGTTCTGCATGAATCCAAGCACAA...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CCA 90 bp AATCAGAATCTCAGAATGGGAAGGAACCCATTCTACCAATCCTTCATTTGTCAGATCTTCAATGTCTTCTaGAATTGGCTCTGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: NQNLRMGRNPFYQSFICQIFNVF*NWLCFN
Trigger: ATTGAAACAGAGCCAATTCCAGAAGACATTGAAGAT...CTGACAAATGAAGGATTGGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
3UTR CAA 72 bp GATTTCATAGGAGACTACATCATGATCATCCTCTTCTaGCTTTATGGTTGGAAGTGGAGCTTCAAGAATATA +
Preference number: 4 (lower is better)
Translates to: DFIGDYIMIILF*LYGWKWSFKNI
Trigger: TATATTCTTGAAGCTCCACTTCCAACCATAAAGCAAGAAGAGGATGATCATGATGTAGTCTCCTATGAAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR TCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGGTCCTGGGTAATATTTaGAAAACTAAGGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLVLGNI*KTKVKL
Trigger: AAGCTTGACCTTAGTTTTTCAAATATTACCCAGGAC...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR TCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGCAACTGGACTTGAGATaGAGTTTAGGTCATATTGAA +
Preference number: 4 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLQLDLR*SLGHIE
Trigger: TTCAATATGACCTAAACTTCATCTCAAGTCCAGTTG...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR GCA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGATATTACAGGTGATTTaGTGCAATCATGAAACACAG +
Preference number: 4 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLILQVI*CNHETQ
Trigger: CTGTGTTTCATGATTGCAGCAAATCACCTGTAATAT...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR GCA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTTTGTGCTTGGATTCATaGAGAACACATTACCGTTTA +
Preference number: 4 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRLCLDS*RTHYRL
Trigger: TAAACGGTAATGTGTTCTGCATGAATCCAAGCACAA...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCACTACGCTTTGTGTTTaGGGGCTGGAGAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPTTLCV*GLERVG
Trigger: CCCCACCCTCTCCAGCCCCAAAACACAAAGCGTAGT...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS GCA 90 bp TTCCTCGAAGGTACTGACCGCCGCGGCTCCTCTCTTCACAGCGTCTaGCGGAGGCCTCCGTTTACTCCGGTTACCGAGACAACGCCACCC +
Preference number: 5 (lower is better)
Translates to: FLEGTDRRGSSLHSV*RRPPFTPVTETTPP
Trigger: GGGTGGCGTTGTCTCGGTAACCGGAGTAAACGGAGGCCTCCGGCAGACGCTGTGAAGAGAGGAGCCGCGGCGGTCAGTACCTTCGAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295868.6
CDS-3UTR CAA 90 bp ACATGGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTGTGGTGGGACAGGCTGACCACACGGCCAAACTaGCTGATCATGAGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: TWLTDLPKLGSPLWWDRLTTRPN*LIMSCR
Trigger: CCGGCAGCTCATGATCAGCAAGTTTGGCCGTGTGGT...CAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCGAGGAAGACTTGGCATaGCTGAGTTCCCTTCTACAT +
Preference number: 5 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPEEDLA*LSSLLH
Trigger: ATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTC...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp ACATGGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTGTGGTGGGACAGGCTGGCCATTTCCCAGAACTaGATGTGGCCTGATCCCGAT +
Preference number: 5 (lower is better)
Translates to: TWLTDLPKLGSPLWWDRLAISQN*MWPDPD
Trigger: ATCGGGATCAGGCCACATCAAGTTCTGGGAAATGGC...CAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCACCACACGGCCAAACTaGCTGATCATGAGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: SGRRGCRRPTDKLARGRITTRPN*LIMSCR
Trigger: CCGGCAGCTCATGATCAGCAAGTTTGGCCGTGTGGT...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGCCTTTCCGCCTGGAGTaGGATCAATTCAGTGACCTC +
Preference number: 5 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGPFRLE*DQFSDL
Trigger: GAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGG...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGGGAGGATAAGACTGCCCCAGGCAGCTGCTTCTaGTGGCTGCCAGCTCCCACG +
Preference number: 5 (lower is better)
Translates to: GLYLFLSWRLNGWEDKTAPGSCF*WLPAPT
Trigger: CGTGGGAGCTGGCAGCCACAAGAAGCAGCTGCCTGG...GGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR CAA 90 bp ACATGGCTCACAGACCTCCCTAAGCTGGGGAGCCCGCTGTGGTGGGACAGGCTGATCTCTGCTGCTAGCTaGTTCCTCCTTTCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: TWLTDLPKLGSPLWWDRLISAAS*FLLSSL
Trigger: AAGGGAAGAAAGGAGGAACAAGCTAGCAGCAGAGAT...CAGCCTGTCCCACCACAGCGGGCTCCCCAGCTTAGGGAGGTCTGTGAGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCAGTTCTTTGATCCTGTaGACCAAATACTGTTGCATG +
Preference number: 5 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPSSLIL*TKYCCM
Trigger: CATGCAACAGTATTTGGTCAACAGGATCAAAGAACT...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACAAGCCTTACTACGCTTaGTGTTTTGGGGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYKPYYA*CFGAGE
Trigger: CTCTCCAGCCCCAAAACACAAAGCGTAGTAAGGCTT...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCACTCTCTCCAGGCAGAGCTGGAGCAGGGGTTaGCTGAGGTACTGTAGTGCT +
Preference number: 5 (lower is better)
Translates to: GMVSPQDLSQRPATLSRQSWSRG*LRYCSA
Trigger: AGCACTACAGTACCTCAGCAAACCCCTGCTCCAGCT...CTGCCTGGAGAGAGTGGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GTGGCTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCGTTGACCAAATACTGTaGCATGTACACGTGTTTAAT +
Preference number: 5 (lower is better)
Translates to: VAASSHEGPGDPHLAFTPVDQIL*HVHVFN
Trigger: ATTAAACACGTGTACATGCAACAGTATTTGGTCAAC...GGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GGCCTTACCCTCAGAGGTGAGGCTGCTCCTCTGGGAGCACAGCAGAAGGCAGGGATAGAGTGCCTTTTCTaGCTCCTGGAGTTTGGTGAT +
Preference number: 5 (lower is better)
Translates to: GLTLRGEAAPLGAQQKAGIECLF*LLEFGD
Trigger: ATCACCAAACTCCAGGAGCAAGAAAAGGCACTCTAT...CCCTGCCTTCTGCTGTGCTCCCAGAGGAGCAGCCTCACCTCTGAGGGTAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCTCTATCTGGTGGAGCTaGAGCGGAATCACAACTAGC +
Preference number: 5 (lower is better)
Translates to: SGRRGCRRPTDKLARGRISIWWS*SGITTS
Trigger: GCTAGTTGTGATTCCGCTCAAGCTCCACCAGATAGA...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GCTCCTAGTGTGACTGCAACTCCACGAAAGACCCTGAGCCAGAACACCCGGCCACTCATGGATTCGTTCTaGCAGCCGTCTCAAGGCATG +
Preference number: 5 (lower is better)
Translates to: APSVTATPRKTLSQNTRPLMDSF*QPSQGM
Trigger: CATGCCTTGAGACGGCTGCAAGAACGAATCCATGAG...TGGCCGGGTGTTCTGGCTCAGGGTCTTTCGTGGAGTTGCAGTCACACTAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCCTGGGAGATGGAACTTaGGCCTTCATGTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: SGRRGCRRPTDKLARGRILGDGT*AFMSFL
Trigger: AAGGAAAGACATGAAGGCCAAAGTTCCATCTCCCAG...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp CTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGTTCTCTCTCTCCATTCTTaGTTAAGTTTTTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LPAPTKAPVTPTWHSHPVLSLHS*LSFCCL
Trigger: CAAGCAGCAAAAACTTAACAAAGAATGGAGAGAGAG...AACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp CTGCCAGCTCCCACGAAGGCCCCGGTGACCCCCACCTGGCATTCACACCCTGTTTTAGTCCAGCTCAGTTaGGGAATAATTATCCCGATT +
Preference number: 5 (lower is better)
Translates to: LPAPTKAPVTPTWHSHPVLVQLS*GIIIPI
Trigger: AATCGGGATAATTATTCCCAAACTGAGCTGGACTAA...AACAGGGTGTGAATGCCAGGTGGGGGTCACCGGGGCCTTCGTGGGAGCTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GCTCCTAGTGTGACTGCAACTCCACGAAAGACCCTGAGCCAGAACACCCGGCCAAAGGAGTCCTACCCGTaGAGGTTGGAGAGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: APSVTATPRKTLSQNTRPKESYP*RLEREN
Trigger: ATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTT...TGGCCGGGTGTTCTGGCTCAGGGTCTTTCGTGGAGTTGCAGTCACACTAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTTCCCAAAGCAGCATGTaGCCCCATTCTGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSSQSSM*PHSDPE
Trigger: CTCAGGGTCAGAATGGGGCAACATGCTGCTTTGGGA...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp AGGAGCAGGATAGCTTCCCAGCCACCCTGCCCATGCCACACCCTGCTGGTCTACATATTGAATCACGGGTaGTCAAATCCCCATCCTTTC +
Preference number: 5 (lower is better)
Translates to: RSRIASQPPCPCHTLLVYILNHG*SNPHPF
Trigger: GAAAGGATGGGGATTTGACAACCCGTGATTCAATAT...GTAGACCAGCAGGGTGTGGCATGGGCAGGGTGGCTGGGAAGCTATCCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp CCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGGCATTGCCATTTTCTCATGGATTCGTTCTaGCAGCCGTCTCAAGGCATG +
Preference number: 5 (lower is better)
Translates to: PLLPQHLLPEGPGRHCHFLMDSF*QPSQGM
Trigger: CATGCCTTGAGACGGCTGCAAGAACGAATCCATGAG...AAAATGGCAATGCCTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CAA 90 bp AATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGCCTTTCCGCCTGGAGTaGGATCAATTCAGTGACCTC +
Preference number: 5 (lower is better)
Translates to: NSVTSSLATTSASRGPWKPFRLE*DQFSDL
Trigger: GAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGG...CTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CAA 90 bp AGTGGCAGGCGAGGCTGCAGGAGGCCCACAGATAAGCTGGCAAGAGGAAGGATCATACATCATTCTCTCTaGCTGTCTCCCTCACTCTTG +
Preference number: 5 (lower is better)
Translates to: SGRRGCRRPTDKLARGRIIHHSL*LSPSLL
Trigger: CAAGAGTGAGGGAGACAGCAAGAGAGAATGATGTAT...GATCCTTCCTCTTGCCAGCTTATCTGTGGGCCTCCTGCAGCCTCGCCTGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCTCCTACCCGTTGAGGTaGGAGAGGGAAAATAAAGAA +
Preference number: 5 (lower is better)
Translates to: ISQAALWRGPHGEELKPCSYPLR*ERENKE
Trigger: TTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGA...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCAGTGATCCCTGCAGCTaGAGACCGGTGAACGTAAAA +
Preference number: 5 (lower is better)
Translates to: AVQGSCGHEISERRNSHGSDPCS*RPVNVK
Trigger: TTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACT...GCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCCACAACTGCCTTGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CAA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCCATCAGCAGTGTCTATaGTCTCAAAATCCCATATCC +
Preference number: 5 (lower is better)
Translates to: ISQAALWRGPHGEELKPCHQQCL*SQNPIS
Trigger: GGATATGGGATTTTGAGACAATAGACACTGCTGATG...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCACTCTCTCCAGGCAGAAGGGCAGTACCTCCTaGTTTGAATTTCATCTGGGC +
Preference number: 5 (lower is better)
Translates to: GMVSPQDLSQRPATLSRQKGSTS*FEFHLG
Trigger: GCCCAGATGAAATTCAAACAAGGAGGTACTGCCCTT...CTGCCTGGAGAGAGTGGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCGTTGAAAGTGATAGTTaGGATGGGATTGTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: ISQAALWRGPHGEELKPCVESDS*DGIVLC
Trigger: ACAGAGGACAATCCCATCCAAACTATCACTTTCAAC...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCTTAAGTTTTTGCTGCTaGGAATTTTCCTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: ISQAALWRGPHGEELKPCLSFCC*EFSSWS
Trigger: GCTCCAGGAGGAAAATTCCAAGCAGCAAAAACTTAA...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCCCTGAGAAAAAGCTTTaGTCCTTAGTATGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: ISQAALWRGPHGEELKPCPEKKL*SLVWVV
Trigger: AACAACCCATACTAAGGACAAAAGCTTTTTCTCAGG...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp AGTTGTGGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCTTCAATAGCTCCTCCCAAAGCAGCATGTaGCCCCATTCTGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: SCGHEISERRNSHGFNSSSQSSM*PHSDPE
Trigger: CTCAGGGTCAGAATGGGGCAACATGCTGCTTTGGGA...GGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCCACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CAA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAGCAGTACCTCCTTGTTaGAATTTCATCTGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: GRIPGTWFITSMREQQGAAVPPC*NFIWAK
Trigger: TTTGGCCCAGATGAAATTCAAACAAGGAGGTACTGC...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp ATATCCCAAGCGGCCCTATGGAGAGGCCCACATGGCGAGGAACTGAAGCCCTGCAATGTTCTTCAGTTCTaGTACCAGGCACTGTATTTC +
Preference number: 5 (lower is better)
Translates to: ISQAALWRGPHGEELKPCNVLQF*YQALYF
Trigger: GAAATACAGTGCCTGGTACAAGAACTGAAGAACATT...GCAGGGCTTCAGTTCCTCGCCATGTGGGCCTCTCCATAGGGCCGCTTGGGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GCTCCTAGTGTGACTGCAACTCCACGAAAGACCCTGAGCCAGAACACCCGGCCAGAATGTCAGTTGTGCTaGGATTCATGCAGAACACAT +
Preference number: 5 (lower is better)
Translates to: APSVTATPRKTLSQNTRPECQLC*DSCRTH
Trigger: ATGTGTTCTGCATGAATCCAAGCACAACTGACATTC...TGGCCGGGTGTTCTGGCTCAGGGTCTTTCGTGGAGTTGCAGTCACACTAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GATCCCTGCAGCTTGAGACCGGTGAACGTAAAAGCCATTTCCCAGAACCTCGAAAGTGATCCCTGCAGCTaGAGACCGGTGAACGTAAAA +
Preference number: 5 (lower is better)
Translates to: DPCSLRPVNVKAISQNLESDPCS*RPVNVK
Trigger: TTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACT...TTCGAGGTTCTGGGAAATGGCTTTTACGTTCACCGGTCTCAAGCTGCAGGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489938.2
CDS-3UTR CAA 90 bp AGTTGTGGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCTTCAATAGCTCCCGACAGAGCTCCACTTaGATCAGACCACCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: SCGHEISERRNSHGFNSSRQSST*IRPPSQ
Trigger: TTGGGAAGGTGGTCTGATCAAAGTGGAGCTCTGTCG...GGAGCTATTGAAGCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCCACAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CAA 90 bp GCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCGCAGTACCTCCTTGTTaGAATTTCATCTGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: AVQGSCGHEISERRNSHGAVPPC*NFIWAK
Trigger: TTTGGCCCAGATGAAATTCAAACAAGGAGGTACTGC...GCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCCACAACTGCCTTGGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CAA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTGGGGCTGTCTTCAGATaGAAATCTCCCATATACACC +
Preference number: 5 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSGAVFR*KSPIYT
Trigger: GGTGTATATGGGAGATTTCAATCTGAAGACAGCCCC...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp CGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACTCTATCTGGTGGAGCTaGAGCGGAATCACAACTAGC +
Preference number: 5 (lower is better)
Translates to: RNPFRLELDQFSDLLSCHSIWWS*SGITTS
Trigger: GCTAGTTGTGATTCCGCTCAAGCTCCACCAGATAGA...GTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CAA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCACTGGTCTACTTGTGTTaGAAGCTTAACTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: GRIPGTWFITSMREQQGALVYLC*KLNFPK
Trigger: CTTTGGGAAGTTAAGCTTCAAACACAAGTAGACCAG...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTGAGAGGAGAAACAGCCACGGCTTCCATATGGCTCCATaGGCATCCCTAACATATCCA +
Preference number: 5 (lower is better)
Translates to: AVQGSCGHEISERRNSHGFHMAP*ASLTYP
Trigger: TGGATATGTTAGGGATGCCAATGGAGCCATATGGAA...GCCGTGGCTGTTTCTCCTCTCACTTATCTCATGGCCACAACTGCCTTGGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465186.1
CDS-3UTR CAA 90 bp TCAGTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGGCCATTTCCCAGAACTaGATGTGGCCTGATCCCGAT +
Preference number: 5 (lower is better)
Translates to: SVVIVLPNRPSDPCSLRPAISQN*MWPDPD
Trigger: ATCGGGATCAGGCCACATCAAGTTCTGGGAAATGGC...CGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CAA 90 bp CCTAGTGATCCCTGCAGCTTGAGACCGGTGAACGTAAAAGCCATTTCCCAGAACAAGGGCAGTACCTCCTaGTTTGAATTTCATCTGGGC +
Preference number: 5 (lower is better)
Translates to: PSDPCSLRPVNVKAISQNKGSTS*FEFHLG
Trigger: GCCCAGATGAAATTCAAACAAGGAGGTACTGCCCTT...GTTCTGGGAAATGGCTTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CAA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCATCTTGCTCCTGGAGTTaGGTGATTTCATTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: GRIPGTWFITSMREQQGASCSWS*VISFFF
Trigger: GAAAAAGAATGAAATCACCAAACTCCAGGAGCAAGA...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAACTCATGGATTCGTTCTaGCAGCCGTCTCAAGGCATG +
Preference number: 5 (lower is better)
Translates to: PLLHSELRSLQKLWAIQELMDSF*QPSQGM
Trigger: CATGCCTTGAGACGGCTGCAAGAACGAATCCATGAG...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CAA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCACCACACGGCCAAACTaGCTGATCATGAGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSTTRPN*LIMSCR
Trigger: CCGGCAGCTCATGATCAGCAAGTTTGGCCGTGTGGT...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CAA 90 bp CGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCAGTTCCCATCGCATTaGAGCAATCTTTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: RLELDQFSDLLSCHNICFQFPSH*SNLFLP
Trigger: TGGGAGGAAAAGATTGCTCAAATGCGATGGGAACTG...GAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CAA 90 bp GGCAGGCATGAGCAACTCCTTTACTCTGAAGTTGTGACAGAGGGGCTGGACTCTATACATCATTCTCTCTaGCTGTCTCCCTCACTCTTG +
Preference number: 5 (lower is better)
Translates to: GRHEQLLYSEVVTEGLDSIHHSL*LSPSLL
Trigger: CAAGAGTGAGGGAGACAGCAAGAGAGAATGATGTAT...AGAGTCCAGCCCCTCTGTCACAACTTCAGAGTAAAGGAGTTGCTCATGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGCCAGGCAGCTGCTTCTaGTGGCTGCCAGCTCCCACG +
Preference number: 5 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMPGSCF*WLPAPT
Trigger: CGTGGGAGCTGGCAGCCACAAGAAGCAGCTGCCTGG...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTACTACGCTTTGTGTTTaGGGGCTGGAGAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLTTLCV*GLERVG
Trigger: CCCCACCCTCTCCAGCCCCAAAACACAAAGCGTAGT...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCTCCAGAAGTTGTAGGTaGGCTCGCTTTCTACAGTCA +
Preference number: 5 (lower is better)
Translates to: STITKGMVSPQDLSQRPASRSCR*ARFLQS
Trigger: TGACTGTAGAAAGCGAGCCAACCTACAACTTCTGGA...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp ATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTAGTGATCCCTGCAGCTaGAGACCGGTGAACGTAAAA +
Preference number: 5 (lower is better)
Translates to: IPGPQKPSHSWVRSQVCCSDPCS*RPVNVK
Trigger: TTTTACGTTCACCGGTCTCAAGCTGCAGGGATCACT...ACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp CGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCATAGAGTGCCTTTTCTaGCTCCTGGAGTTTGGTGAT +
Preference number: 5 (lower is better)
Translates to: RLELDQFSDLLSCHNICFIECLF*LLEFGD
Trigger: ATCACCAAACTCCAGGAGCAAGAAAAGGCACTCTAT...GAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CAA 90 bp AATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGCCCTGGAAGCTCTCTCTCCATTCTTaGTTAAGTTTTTGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: NSVTSSLATTSASRGPWKLSLHS*LSFCCL
Trigger: CAAGCAGCAAAAACTTAACAAAGAATGGAGAGAGAG...CTTCCAGGGCCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CAA 90 bp GGAAGGATCCCAGGCACATGGTTCATCACGAGCATGAGGGAACAGCAAGGGGCAGGTGAGATCACAAGTTaGTTGTTTCAAGCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: GRIPGTWFITSMREQQGAGEITS*LFQAKF
Trigger: AAACTTAGCTTGAAACAACAAACTTGTGATCTCACC...TGCCCCTTGCTGTTCCCTCATGCTCGTGATGAACCATGTGCCTGGGATCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp TCCCCAGATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTCTGGTCTACTTGTGTTaGAAGCTTAACTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: SPDSWTSETLSLLGEITSLVYLC*KLNFPK
Trigger: CTTTGGGAAGTTAAGCTTCAAACACAAGTAGACCAG...ACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAATCTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp ATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTAAGCCTTACTACGCTTaGTGTTTTGGGGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: IPGPQKPSHSWVRSQVCCKPYYA*CFGAGE
Trigger: CTCTCCAGCCCCAAAACACAAAGCGTAGTAAGGCTT...ACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS TCA 90 bp TTCCCATCACTCTTTGATGTAACTGATTTCTCCCCATCAGTATCCTaGTCATCTGGTTCCTTCATTTCCTCGAAGGTACTGACCGCCGCG +
Preference number: 5 (lower is better)
Translates to: FPSLFDVTDFSPSVS*SSGSFISSKVLTAA
Trigger: CGCGGCGGTCAGTACCTTCGAGGAAATGAAGGAACCAGATGATCAGGATACTGATGGGGAGAAATCAGTTACATCAAAGAGTGATGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295868.6
ENST00000393845.9
ENST00000479422.1
ENST00000488854.6
CDS GCA 90 bp AAGCATAAGAGGTGCACTTCCTTCTTTGCCCCTTGTTTAGCTCCTTaGCTTTGGGCTTCTACGTCTTCCTTACTGAGTAACAGTAGCCAG +
Preference number: 5 (lower is better)
Translates to: KHKRCTSFFAPCLAP*LWASTSSLLSNSSQ
Trigger: CTGGCTACTGTTACTCAGTAAGGAAGACGTAGAAGCCCAAAGGCAAGGAGCTAAACAAGGGGCAAAGAAGGAAGTGCACCTCTTATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465510.1
CDS CCA 90 bp TCCTCCTGGAGCTCATGGATTCGTTCTTGCAGCCGTCTCAAGGCATaGTTAGAGAAGACCAAAGTACCAGAAAGATCGCTAGGTATTTCT +
Preference number: 5 (lower is better)
Translates to: SSWSSWIRSCSRLKA*LEKTKVPERSLGIS
Trigger: AGAAATACCTAGCGATCTTTCTGGTACTTTGGTCTTCTCTAACCATGCCTTGAGACGGCTGCAAGAACGAATCCATGAGCTCCAGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000465510.1
CDS-3UTR CAA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCACGACAGAGCTCCACTTaGATCAGACCACCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSRQSST*IRPPSQ
Trigger: TTGGGAAGGTGGTCTGATCAAAGTGGAGCTCTGTCG...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GGGCTGTATCTCTTTCTCTCGTGGAGACTGAATGGGTGGGAGGATAAGACTGCCAAAGTAATAAGATTGTaGGAGGTGATGAGGAGACAG +
Preference number: 5 (lower is better)
Translates to: GLYLFLSWRLNGWEDKTAKVIRL*EVMRRQ
Trigger: CTGTCTCCTCATCACCTCCAACAATCTTATTACTTT...GGCAGTCTTATCCTCCCACCCATTCAGTCTCCACGAGAGAAAGAGATACAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS TCA 90 bp TCTTCAACTAAAGCCTCCTCAATGTCCAGCCTTTTCTCTCGAAGGTaGAGGGCCAGCTCAAAAAGAGCCACATCACAATTTGTTGGGCAA +
Preference number: 5 (lower is better)
Translates to: SSTKASSMSSLFSRR*RASSKRATSQFVGQ
Trigger: TTGCCCAACAAATTGTGATGTGGCTCTTTTTGAGCTGGCCCTTCACCTTCGAGAGAAAAGGCTGGACATTGAGGAGGCTTTAGTTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000461734.1
CDS GCA 90 bp TTTTGCTGCTTGGAATTTTCCTCCTGGAGCTCATGGATTCGTTCTTaGAGCCGTCTCAAGGCATGGTTAGAGAAGACCAAAGTACCAGAA +
Preference number: 5 (lower is better)
Translates to: FCCLEFSSWSSWIRS*SRLKAWLEKTKVPE
Trigger: TTCTGGTACTTTGGTCTTCTCTAACCATGCCTTGAGACGGCTGCAAGAACGAATCCATGAGCTCCAGGAGGAAAATTCCAAGCAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000465510.1
CDS-3UTR CAA 90 bp CCATCTTCTCCCATCTCTGCTGCTAGCTTGTTCCTCCTTTCTTCCCTTATTTTCCCTCAAAGCTTTGATTaGCTCTCTCTTCCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: PSSPISAASLFLLSSLIFPQSFD*LSLPCL
Trigger: AAGGCACGGAAGAGAGAGCAAATCAAAGCTTTGAGG...GAAAATAAGGGAAGAAAGGAGGAACAAGCTAGCAGCAGAGATGGGAGAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CAA 90 bp TCTCATGTGCTCAGGTATCTTGTAGTCTGGGGCTGTCTTCAGATTGAAATCTCCCCTCAAAGCTTTGATTaGCTCTCTCTTCCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SHVLRYLVVWGCLQIEISPQSFD*LSLPCL
Trigger: AAGGCACGGAAGAGAGAGCAAATCAAAGCTTTGAGG...GGAGATTTCAATCTGAAGACAGCCCCAGACTACAAGATACCTGAGCACATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490481.1
CDS-3UTR CAA 90 bp CGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCTCTTGCTCCTGGAGTTaGGTGATTTCATTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: RLELDQFSDLLSCHNICFSCSWS*VISFFF
Trigger: GAAAAAGAATGAAATCACCAAACTCCAGGAGCAAGA...GAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CAA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCACAGGTGAGGAAGACTaGGCATTGCTGAGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSTGEED*ALLSSL
Trigger: AAGGGAACTCAGCAATGCCAAGTCTTCCTCACCTGT...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTACAGGTGAGGAAGACTaGGCATTGCTGAGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLTGEED*ALLSSL
Trigger: AAGGGAACTCAGCAATGCCAAGTCTTCCTCACCTGT...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp AAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTCAGTGACCTCCTCTCTTACTGTAGGTCCATTCTaGCTGCAATCAGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: KAEILSAWSWINSVTSSLTVGPF*LQSESE
Trigger: TTCTGATTCTGATTGCAGCAAGAATGGACCTACAGT...AAGAGAGGAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR CAA 90 bp ATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTCCTACCCGTTGAGGTaGGAGAGGGAAAATAAAGAA +
Preference number: 5 (lower is better)
Translates to: IPGPQKPSHSWVRSQVCCSYPLR*ERENKE
Trigger: TTCTTTATTTTCCCTCTCCAACCTCAACGGGTAGGA...ACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCAAGGAGTCCTACCCGTaGAGGTTGGAGAGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSKESYP*RLEREN
Trigger: ATTTTCCCTCTCCAACCTCAACGGGTAGGACTCCTT...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS CCA 90 bp CTTCTTGGCAGCATTTATTCTCATGTGCTCAGGTATCTTGTAGTCTaGGGCTGTCTTCAGATTGAAATCTCCCATATACACCTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: LLGSIYSHVLRYLVV*GCLQIEISHIHLGF
Trigger: GAAGCCCAGGTGTATATGGGAGATTTCAATCTGAAGACAGCCCCAGACTACAAGATACCTGAGCACATGAGAATAAATGCTGCCAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS CCA 90 bp TTCCATGGACCAAAGAATCTAGGTGTCCTAGTTCCTCTTCCTTCTTaGCAGCATTTATTCTCATGTGCTCAGGTATCTTGTAGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: FHGPKNLGVLVPLPS*QHLFSCAQVSCSLG
Trigger: CCCCAGACTACAAGATACCTGAGCACATGAGAATAAATGCTGCCAAGAAGGAAGAGGAACTAGGACACCTAGATTCTTTGGTCCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS CCA 90 bp TCTTTGTTAAGTTTTTGCTGCTTGGAATTTTCCTCCTGGAGCTCATaGATTCGTTCTTGCAGCCGTCTCAAGGCATGGTTAGAGAAGACC +
Preference number: 5 (lower is better)
Translates to: SLLSFCCLEFSSWSS*IRSCSRLKAWLEKT
Trigger: GGTCTTCTCTAACCATGCCTTGAGACGGCTGCAAGAACGAATCCATGAGCTCCAGGAGGAAAATTCCAAGCAGCAAAAACTTAACAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000465510.1
ENST00000489244.1
CDS-3UTR CAA 90 bp GTGATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGGTGAACTCAGTAGTGATTGTTTaGCCAAATCGACCTAGTGAT +
Preference number: 5 (lower is better)
Translates to: VIVLPNRPSDPCSLRPVNSVVIV*PNRPSD
Trigger: ATCACTAGGTCGATTTGGCAAAACAATCACTACTGA...GTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488854.6
ENST00000489938.2
CDS-3UTR CAA 90 bp TCAGTAGTGATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGCATCAGCAGTGTCTATaGTCTCAAAATCCCATATCC +
Preference number: 5 (lower is better)
Translates to: SVVIVLPNRPSDPCSLRPHQQCL*SQNPIS
Trigger: GGATATGGGATTTTGAGACAATAGACACTGCTGATG...CGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAATCACTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CAA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCACCTCAAAGCTTTGATTaGCTCTCTCTTCCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSPQSFD*LSLPCL
Trigger: AAGGCACGGAAGAGAGAGCAAATCAAAGCTTTGAGG...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCACTAGCTCGTTTGAATTaGGAGTACTTAGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSLARLN*EYLEGC
Trigger: GCAGCCCTCTAAGTACTCCAAATTCAAACGAGCTAG...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GAAATCTCCCATATACACCTGGGCTTCTTTGATGGCTTGAAGATCTTTGGGATCGGGGCTGTCTTCAGATaGAAATCTCCCATATACACC +
Preference number: 5 (lower is better)
Translates to: EISHIHLGFFDGLKIFGIGAVFR*KSPIYT
Trigger: GGTGTATATGGGAGATTTCAATCTGAAGACAGCCCC...GATCCCAAAGATCTTCAAGCCATCAAAGAAGCCCAGGTGTATATGGGAGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490481.1
CDS-3UTR CAA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTCCAGCTCCACATCCGTaGGCTCTGCTTTTTCAAATT +
Preference number: 5 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLPAPHP*ALLFQI
Trigger: AATTTGAAAAAGCAGAGCCAACGGATGTGGAGCTGG...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp AGTTGGATCAATTCAGTGACCTCCTCTCTTGCCACAACATCTGCTTCCCGAGGGATGTACTGTTCCTCTTaGTCTAAGGAATTAACACGT +
Preference number: 5 (lower is better)
Translates to: SWINSVTSSLATTSASRGMYCSS*SKELTR
Trigger: ACGTGTTAATTCCTTAGACAAAGAGGAACAGTACAT...CCCTCGGGAAGCAGATGTTGTGGCAAGAGAGGAGGTCACTGAATTGATCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CAA 90 bp TACGCAAAAGAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTTTAAGTTTTTGCTGCTaGGAATTTTCCTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: YAKEQSPPLRPKSFPPGVLSFCC*EFSSWS
Trigger: GCTCCAGGAGGAAAATTCCAAGCAGCAAAAACTTAA...AACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTCTTTTGCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CAA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTCAGTTCCCATCGCATTaGAGCAATCTTTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGQFPSH*SNLFLP
Trigger: TGGGAGGAAAAGATTGCTCAAATGCGATGGGAACTG...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp TACGCAAAAGAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTTTCTGGTGTGTTCTTTaGTCTTCATCATCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: YAKEQSPPLRPKSFPPGVFWCVL*SSSSVP
Trigger: GGGAACTGATGATGAAGACAAAAGAACACACCAGAA...AACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTCTTTTGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CAA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTGAGGAAGACTTGGCATaGCTGAGTTCCCTTCTACAT +
Preference number: 5 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPEEDLA*LSSLLH
Trigger: ATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTC...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp CCTCTGCTCCACTCAGAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAACTGTAGGTCCATTCTaGCTGCAATCAGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: PLLHSELRSLQKLWAIQETVGPF*LQSESE
Trigger: TTCTGATTCTGATTGCAGCAAGAATGGACCTACAGT...TTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTCTGAGTGGAGCAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTGCTTTCCACAAGGGAACCGTaGTACAACAGACCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: EESTKTVGNPRRLVIFLLSTREP*YNRPGK
Trigger: TTTTCCTGGTCTGTTGTACAACGGTTCCCTTGTGGA...AAGCAGGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp ATTCCTGGACCTCAGAAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTGAATGTCAGTTGTGCTaGGATTCATGCAGAACACAT +
Preference number: 5 (lower is better)
Translates to: IPGPQKPSHSWVRSQVCCECQLC*DSCRTH
Trigger: ATGTGTTCTGCATGAATCCAAGCACAACTGACATTC...ACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTTCTGAGGTCCAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS TCA 90 bp CCCTCTTTTTCAAACCTGTCCAATTTGCTTGGTTTTCTCTCTGATTaGCTAGCTCGTTTGAATTTGGAGTACTTAGAGGGCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: PSFSNLSNLLGFLSD*LARLNLEYLEGCTS
Trigger: GCTGGTGCAGCCCTCTAAGTACTCCAAATTCAAACGAGCTAGTCAATCAGAGAGAAAACCAAGCAAATTGGACAGGTTTGAAAAAGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS GCA 90 bp AGGGCTTCTAGATTTACCACACGGCCAAACTTGCTGATCATGAGCTaGCGGACTGTTTCCTCCATTTTGTGTATGGTTTTTGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: RASRFTTRPNLLIMS*RTVSSILCMVFVIS
Trigger: AGAAATGACAAAAACCATACACAAAATGGAGGAAACAGTCCGGCAGCTCATGATCAGCAAGTTTGGCCGTGTGGTAAATCTAGAAGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000465510.1
CDS-3UTR CAA 90 bp ATTGTTTTGCCAAATCGACCTAGTGATCCCTGCAGCTTGAGACCGGTGAACGTATCAGTAGTGATTGTTTaGCCAAATCGACCTAGTGAT +
Preference number: 5 (lower is better)
Translates to: IVLPNRPSDPCSLRPVNVSVVIV*PNRPSD
Trigger: ATCACTAGGTCGATTTGGCAAAACAATCACTACTGA...TACGTTCACCGGTCTCAAGCTGCAGGGATCACTAGGTCGATTTGGCAAAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488854.6
ENST00000489938.2
CDS-3UTR CAA 90 bp CAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGGGAACCCATCTCAGCACGGATTaGGGAATCTACATCAAAATC +
Preference number: 5 (lower is better)
Translates to: QLCLDSCRTHYRLVHKGTHLSTD*GIYIKI
Trigger: GATTTTGATGTAGATTCCCAAATCCGTGCTGAGATG...GGTTCCCTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp TCTCATGTGCTCAGGTATCTTGTAGTCTGGGGCTGTCTTCAGATTGAAATCTCCCATCTCAGCACGGATTaGGGAATCTACATCAAAATC +
Preference number: 5 (lower is better)
Translates to: SHVLRYLVVWGCLQIEISHLSTD*GIYIKI
Trigger: GATTTTGATGTAGATTCCCAAATCCGTGCTGAGATG...GGAGATTTCAATCTGAAGACAGCCCCAGACTACAAGATACCTGAGCACATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490481.1
CDS-3UTR CAA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGCAGTTCCCATCGCATTaGAGCAATCTTTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKQFPSH*SNLFLP
Trigger: TGGGAGGAAAAGATTGCTCAAATGCGATGGGAACTG...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp ATGGGTGGGAGGATAAGACTGCCTTTCCTACGCAAAAGAGCAATCTCCTCCTTTAAAGTAATAAGATTGTaGGAGGTGATGAGGAGACAG +
Preference number: 5 (lower is better)
Translates to: MGGRIRLPFLRKRAISSFKVIRL*EVMRRQ
Trigger: CTGTCTCCTCATCACCTCCAACAATCTTATTACTTT...AAAGGAGGAGATTGCTCTTTTGCGTAGGAAAGGCAGTCTTATCCTCCCACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CAA 90 bp TCTACAATTACCAAGGGGATGGTATCGCCTCAAGACCTTTCTCAGAGACCAGCCGGTGAGATCACAAGTTaGTTGTTTCAAGCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: STITKGMVSPQDLSQRPAGEITS*LFQAKF
Trigger: AAACTTAGCTTGAAACAACAAACTTGTGATCTCACC...GGCTGGTCTCTGAGAAAGGTCTTGAGGCGATACCATCCCCTTGGTAATTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGTCCACAAGGGAACCGTaGTACAACAGACCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLSTREP*YNRPGK
Trigger: TTTTCCTGGTCTGTTGTACAACGGTTCCCTTGTGGA...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS TCA 90 bp AGGTCCCTCTTTTTCAAACCTGTCCAATTTGCTTGGTTTTCTCTCTaGTTGACTAGCTCGTTTGAATTTGGAGTACTTAGAGGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: RSLFFKPVQFAWFSL*LTSSFEFGVLRGLH
Trigger: GTGCAGCCCTCTAAGTACTCCAAATTCAAACGAGCTAGTCAATCAGAGAGAAAACCAAGCAAATTGGACAGGTTTGAAAAAGAGGGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS GCA 90 bp CTGCCACACTGTTATATCTTCCTGGTCTCTGAAGATAGACTGGTATaGCTAAAGCAGATATGGTACACTACACGATCAAAGGACAAAGGA +
Preference number: 5 (lower is better)
Translates to: LPHCYIFLVSEDRLV*LKQIWYTTRSKDKG
Trigger: TCCTTTGTCCTTTGATCGTGTAGTGTACCATATCTGCTTTAGGCATACCAGTCTATCTTCAGAGACCAGGAAGATATAACAGTGTGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473143.1
CDS CCA 90 bp TGGTTTTCAAATTCAGAAAGATCAGTTGGTTCCCAGCTATGTATATaGCGATACTGTCGTCCAGAAGTTGTAGGTTGGCTCGCTTTCTAC +
Preference number: 5 (lower is better)
Translates to: WFSNSERSVGSQLCI*RYCRPEVVGWLAFY
Trigger: GTAGAAAGCGAGCCAACCTACAACTTCTGGACGACAGTATCGCCATATACATAGCTGGGAACCAACTGATCTTTCTGAATTTGAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295868.6
ENST00000393845.9
CDS CCA 90 bp ATTCTCGATACTGTAGGCTTTGGGATCTTCAATGTCTTCTGGAATTaGCTCTGTTTCAATTCCAAACCTGGGAGATGGAACTTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: ILDTVGFGIFNVFWN*LCFNSKPGRWNFGL
Trigger: AAGGCCAAAGTTCCATCTCCCAGGTTTGGAATTGAAACAGAGCCAATTCCAGAAGACATTGAAGATCCCAAAGCCTACAGTATCGAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295868.6
ENST00000393845.9
CDS-3UTR CAA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGATAGTTTGGATGGGATaGTCCTCTGTATCCGCAAGA +
Preference number: 5 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKIVWMG*SSVSAR
Trigger: TCTTGCGGATACAGAGGACAATCCCATCCAAACTAT...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GGTGAGGAAGACTTGGCATTGCTGAGTTCCCTTCTACATTTATGCAATGTTCCTGGACATAGACTCGAATaGCTCCATTTTTCATTCCAC +
Preference number: 5 (lower is better)
Translates to: GEEDLALLSSLLHLCNVPGHRLE*LHFSFH
Trigger: GTGGAATGAAAAATGGAGCAATTCGAGTCTATGTCC...AGGAACATTGCATAAATGTAGAAGGGAACTCAGCAATGCCAAGTCTTCCTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGGGCTTCTTTGATGGCTaGAAGATCTTTGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLGFFDG*KIFGIF
Trigger: GAAGATCCCAAAGATCTTCAAGCCATCAAAGAAGCC...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp TACGCAAAAGAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGAATTAACACGTTCTaGAAGTATGTTCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: YAKEQSPPLRPKSFPPGVGINTF*KYVLLF
Trigger: AAACAGGAGAACATACTTCAAGAACGTGTTAATTCC...AACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTCTTTTGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461734.1
CDS-3UTR CAA 90 bp AATCAGAATCTCAGAATGGGAAGGAACCCATTCTACCAATCCTTCATTTGTCAGTTCTCCAATGGCTGCTaGAAAACCAGCATAGAGTGC +
Preference number: 5 (lower is better)
Translates to: NQNLRMGRNPFYQSFICQFSNGC*KTSIEC
Trigger: GCACTCTATGCTGGTTTTCAAGCAGCCATTGGAGAA...CTGACAAATGAAGGATTGGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCTTCTGGTGTGTTCTTTaGTCTTCATCATCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSFWCVL*SSSSVP
Trigger: GGGAACTGATGATGAAGACAAAAGAACACACCAGAA...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CAA 90 bp GACTGGATCTGGTTTTACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGCCTTTCCGCCTGGAGTaGGATCAATTCAGTGACCTC +
Preference number: 5 (lower is better)
Translates to: DWIWFYTFRRVQFKVIRLPFRLE*DQFSDL
Trigger: GAGGTCACTGAATTGATCCAACTCCAGGCGGAAAGG...CAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTAAAACCAGATCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000489244.1
CDS-3UTR CAA 90 bp GAGCAATCTCCTCCTTTAAGGCCGAAATCCTTTCCGCCTGGAGTTGGATCAATTAAAAGACTGTGGCTCTaGTATACATCATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: EQSPPLRPKSFPPGVGSIKRLWL*YTSFSL
Trigger: AAGAGAGAATGATGTATACAAGAGCCACAGTCTTTT...AATTGATCCAACTCCAGGCGGAAAGGATTTCGGCCTTAAAGGAGGAGATTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489244.1
CDS-3UTR CAA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTCTTCCAATGCTGAGATaGATCATCGGTGATACTATG +
Preference number: 5 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGLPMLR*IIGDTM
Trigger: CATAGTATCACCGATGATCAATCTCAGCATTGGAAG...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS CCA 90 bp ATCTTCCTGGTCTCTGAAGATAGACTGGTATGCCTAAAGCAGATATaGTACACTACACGATCAAAGGACAAAGGAGAGTGTAGTATGATG +
Preference number: 5 (lower is better)
Translates to: IFLVSEDRLVCLKQI*YTTRSKDKGECSMM
Trigger: CATCATACTACACTCTCCTTTGTCCTTTGATCGTGTAGTGTACCATATCTGCTTTAGGCATACCAGTCTATCTTCAGAGACCAGGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473143.1
CDS-3UTR CAA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTTCAGTAGTGATTGTTTaGCCAAATCGACCTAGTGAT +
Preference number: 5 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGSVVIV*PNRPSD
Trigger: ATCACTAGGTCGATTTGGCAAAACAATCACTACTGA...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp AAAATCATAGATTCGAACAGAGCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTATGATCATCCTCTTCTaGCTTTATGGTTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: KIIDSNRAVQGSCGHEISMIILF*LYGWKW
Trigger: CCACTTCCAACCATAAAGCAAGAAGAGGATGATCAT...ACTTATCTCATGGCCACAACTGCCTTGGACTGCTCTGTTCGAATCTATGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CAA 90 bp TACACTTTCAGGCGAGTTCAGTTTAAAGTAATAAGATTGTTGGAGGTGATGAGGTTCTCCAATGGCTGCTaGAAAACCAGCATAGAGTGC +
Preference number: 5 (lower is better)
Translates to: YTFRRVQFKVIRLLEVMRFSNGC*KTSIEC
Trigger: GCACTCTATGCTGGTTTTCAAGCAGCCATTGGAGAA...CCTCATCACCTCCAACAATCTTATTACTTTAAACTGAACTCGCCTGAAAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000461734.1
CDS-3UTR CAA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCAAAAGTAATAAGATTGTaGGAGGTGATGAGGAGACAG +
Preference number: 5 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSKVIRL*EVMRRQ
Trigger: CTGTCTCCTCATCACCTCCAACAATCTTATTACTTT...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp TTTTTCCATCAAGCTCAACGTCAGAGAGAACTTCATGTGGAAGTGCAGCATGGTTTAGTCCAGCTCAGTTaGGGAATAATTATCCCGATT +
Preference number: 5 (lower is better)
Translates to: FFHQAQRQRELHVEVQHGLVQLS*GIIIPI
Trigger: AATCGGGATAATTATTCCCAAACTGAGCTGGACTAA...ACCATGCTGCACTTCCACATGAAGTTCTCTCTGACGTTGAGCTTGATGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS CCA 90 bp GAAATCTCTTTTCTGGAACTTCTTCTGGGTGTATCTGAGGAATTTTaGGAATGGGTATGTGCTTGGATATGTGAAGAGTCGACTGAATGT +
Preference number: 5 (lower is better)
Translates to: EISFLELLLGVSEEF*EWVCAWICEESTEC
Trigger: ACATTCAGTCGACTCTTCACATATCCAAGCACATACCCATTCCCAAAATTCCTCAGATACACCCAGAAGAAGTTCCAGAAAAGAGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp AAAATCATAGATTCGAACAGAGCAGTCCAAGGCAGTTGTGGCCATGAGATAAGTCCTGAGAAAAAGCTTTaGTCCTTAGTATGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: KIIDSNRAVQGSCGHEISPEKKL*SLVWVV
Trigger: AACAACCCATACTAAGGACAAAAGCTTTTTCTCAGG...ACTTATCTCATGGCCACAACTGCCTTGGACTGCTCTGTTCGAATCTATGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CAA 90 bp TTTGATTTCATAGGAGACTACATCATGATCATCCTCTTCTTGCTTTATGGTTGGATCTCTGCTGCTAGCTaGTTCCTCCTTTCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: FDFIGDYIMIILFLLYGWISAAS*FLLSSL
Trigger: AAGGGAAGAAAGGAGGAACAAGCTAGCAGCAGAGAT...CCAACCATAAAGCAAGAAGAGGATGATCATGATGTAGTCTCCTATGAAATCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488854.6
CDS-3UTR CAA 90 bp GCTATGTCACTTCTGAGCTTGGGCTGTAAAAGACTGTGGCTCTTGTATACATCAAGAGAGAGAATGCACTaGTTCATGTGCCTTTTATTT +
Preference number: 5 (lower is better)
Translates to: AMSLLSLGCKRLWLLYTSRERMH*FMCLLF
Trigger: AAATAAAAGGCACATGAACAAGTGCATTCTCTCTCT...TGATGTATACAAGAGCCACAGTCTTTTACAGCCCAAGCTCAGAAGTGACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCGGAATTAACACGTTCTaGAAGTATGTTCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSGINTF*KYVLLF
Trigger: AAACAGGAGAACATACTTCAAGAACGTGTTAATTCC...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000461734.1
CDS-3UTR CAA 90 bp AATCAGAATCTCAGAATGGGAAGGAACCCATTCTACCAATCCTTCATTTGTCAGCTTCCAATGCTGAGATaGATCATCGGTGATACTATG +
Preference number: 5 (lower is better)
Translates to: NQNLRMGRNPFYQSFICQLPMLR*IIGDTM
Trigger: CATAGTATCACCGATGATCAATCTCAGCATTGGAAG...CTGACAAATGAAGGATTGGTAGAATGGGTTCCTTCCCATTCTGAGATTCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp GAACTGAGGAGTCTACAAAAACTGTGGGCAATCCAAGAAGGCTGGTTATTTTCCAACATTTACTTACTGTaGTCCAACCAAAGGATCAAC +
Preference number: 5 (lower is better)
Translates to: ELRSLQKLWAIQEGWLFSNIYLL*SNQRIN
Trigger: GTTGATCCTTTGGTTGGACAACAGTAAGTAAATGTT...GGAAAATAACCAGCCTTCTTGGATTGCCCACAGTTTTTGTAGACTCCTCAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGGATCCAGTGGTATGTTaGAATCCAGAGTCACAAAAG +
Preference number: 5 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMDPVVC*NPESQK
Trigger: CTTTTGTGACTCTGGATTCAAACATACCACTGGATC...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp CTTGAAGATCTTTGGGATCTTCATAGTCATCACCAGGTTTACTCTTGTATAGTTGGCTTCTTTGATGGCTaGAAGATCTTTGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: LEDLWDLHSHHQVYSCIVGFFDG*KIFGIF
Trigger: GAAGATCCCAAAGATCTTCAAGCCATCAAAGAAGCC...AACTATACAAGAGTAAACCTGGTGATGACTATGAAGATCCCAAAGATCTTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490481.1
CDS-3UTR CAA 90 bp GAATGTCAGTTGTGCTTGGATTCATGCAGAACACATTACCGTTTAGTCCACAAGATGTACTGTTCCTCTTaGTCTAAGGAATTAACACGT +
Preference number: 5 (lower is better)
Translates to: ECQLCLDSCRTHYRLVHKMYCSS*SKELTR
Trigger: ACGTGTTAATTCCTTAGACAAAGAGGAACAGTACAT...CTTGTGGACTAAACGGTAATGTGTTCTGCATGAATCCAAGCACAACTGACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS-3UTR CAA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGTTAAGTTTTTGCTGCTaGGAATTTTCCTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMLSFCC*EFSSWS
Trigger: GCTCCAGGAGGAAAATTCCAAGCAGCAAAAACTTAA...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp AGATTGATCATCGGTGATACTATGGATGACAGTTCAGAAGAGCCAAGTTATATGTTCTGGTGTGTTCTTTaGTCTTCATCATCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: RLIIGDTMDDSSEEPSYMFWCVL*SSSSVP
Trigger: GGGAACTGATGATGAAGACAAAAGAACACACCAGAA...CATATAACTTGGCTCTTCTGAACTGTCATCCATAGTATCACCGATGATCAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS-3UTR CAA 90 bp AAACCCTCTCACTCCTGGGTGAGATCACAAGTTTGTTGTTTCAAGCTAAGTTTGAACATTTACTTACTGTaGTCCAACCAAAGGATCAAC +
Preference number: 5 (lower is better)
Translates to: KPSHSWVRSQVCCFKLSLNIYLL*SNQRIN
Trigger: GTTGATCCTTTGGTTGGACAACAGTAAGTAAATGTT...CAAACTTAGCTTGAAACAACAAACTTGTGATCTCACCCAGGAGTGAGAGGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000489244.1
CDS TCA 90 bp ATAACCAAAAGAATGTACAAGTGTGAGAAGATCCAGTGGTATGTTTaGATCCAGAGTCACAAAAGGCATCGAAGCAAGCTCCATATAATC +
Preference number: 5 (lower is better)
Translates to: ITKRMYKCEKIQWYV*IQSHKRHRSKLHII
Trigger: GATTATATGGAGCTTGCTTCGATGCCTTTTGTGACTCTGGATTCAAACATACCACTGGATCTTCTCACACTTGTACATTCTTTTGGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295868.6
ENST00000393845.9
CDS TCA 90 bp AAATCCCAAAATTATACATATTTAGCCAGGGTGGATACACAAGTGTaGGAAGATCCAGTGGTATGTTTGAATCCAGAGTCACAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: KSQNYTYLARVDTQV*EDPVVCLNPESQKA
Trigger: TGCCTTTTGTGACTCTGGATTCAAACATACCACTGGATCTTCTCACACTTGTGTATCCACCCTGGCTAAATATGTATAATTTTGGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479422.1
CDS CCA 90 bp CTATGTTTCCTCAACATTCTTCTACGATATGCCTGGCAAGCAGAATaGAACACTAGTTCTATTTGGATCAGATTTATAGTTAGATTAGGG +
Preference number: 5 (lower is better)
Translates to: LCFLNILLRYAWQAE*NTSSIWIRFIVRLG
Trigger: CCCTAATCTAACTATAAATCTGATCCAAATAGAACTAGTGTTCCATTCTGCTTGCCAGGCATATCGTAGAAGAATGTTGAGGAAACATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473143.1
CDS-3UTR CAA 90 bp CTAGATTTCTGTAAAATTGAGTTACAGATGAAATGCCACTTGAGACAATCTCGTATGATCATCCTCTTCTaGCTTTATGGTTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: LDFCKIELQMKCHLRQSRMIILF*LYGWKW
Trigger: CCACTTCCAACCATAAAGCAAGAAGAGGATGATCAT...ACGAGATTGTCTCAAGTGGCATTTCATCTGTAACTCAATTTTACAGAAATCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS CCA 90 bp ATACTAAACACCCTATGTTTCCTCAACATTCTTCTACGATATGCCTaGCAAGCAGAATGGAACACTAGTTCTATTTGGATCAGATTTATA +
Preference number: 5 (lower is better)
Translates to: ILNTLCFLNILLRYA*QAEWNTSSIWIRFI
Trigger: TATAAATCTGATCCAAATAGAACTAGTGTTCCATTCTGCTTGCCAGGCATATCGTAGAAGAATGTTGAGGAAACATAGGGTGTTTAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473143.1
CDS CCA 72 bp ACCCCTCTTCCAGGGAGGCGGAACCAGGGCGGGCCGTaGGGCGCATGCGCGGCCGGCGTCCAGCTCTCCGGG +
Preference number: 6 (lower is better)
Translates to: TPLPGRRNQGGP*GACAAGVQLSG
Trigger: CCCGGAGAGCTGGACGCCGGCCGCGCATGCGCCCCACGGCCCGCCCTGGTTCCGCCTCCCTGGAAGAGGGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295868.6
CDS GCA 72 bp GGTACTGACCGCCGCGGCTCCTCTCTTCACAGCGTCTaGCGGAGGCCTCCGTTTACTCCGGTTACCGAGACA +
Preference number: 6 (lower is better)
Translates to: GTDRRGSSLHSV*RRPPFTPVTET
Trigger: TGTCTCGGTAACCGGAGTAAACGGAGGCCTCCGGCAGACGCTGTGAAGAGAGGAGCCGCGGCGGTCAGTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295868.6
CDS GCA 72 bp CTGCTTCTCTCGCTGATAAGCCTCCAGGGCCTCCTCTaGTGCATTCAGATTAGTTGCCACAATTTTCACTTT +
Preference number: 6 (lower is better)
Translates to: LLLSLISLQGLL*CIQISCHNFHF
Trigger: AAAGTGAAAATTGTGGCAACTAATCTGAATGCAGCAGAGGAGGCCCTGGAGGCTTATCAGCGAGAGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000461734.1
CDS CAA 72 bp CTTGGAATTTTCCTCCTGGAGCTCATGGATTCGTTCTaGCAGCCGTCTCAAGGCATGGTTAGAGAAGACCAA +
Preference number: 6 (lower is better)
Translates to: LGIFLLELMDSF*QPSQGMVREDQ
Trigger: TTGGTCTTCTCTAACCATGCCTTGAGACGGCTGCAAGAACGAATCCATGAGCTCCAGGAGGAAAATTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000465510.1
CDS CAA 72 bp GGTGGGAAGGCACATTTGGGCTCCCTGGGCTATAGTTaGCTGACCTCTGACCTAAGAAATGAAAATCCCAAA +
Preference number: 6 (lower is better)
Translates to: GGKAHLGSLGYS*LTSDLRNENPK
Trigger: TTTGGGATTTTCATTTCTTAGGTCAGAGGTCAGCAAACTATAGCCCAGGGAGCCCAAATGTGCCTTCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479422.1
CDS CAA 90 bp TTTTTGCTGCTTGGAATTTTCCTCCTGGAGCTCATGGATTCGTTCTaGCAGCCGTCTCAAGGCATGGTTAGAGAAGACCAAAGTACCAGA +
Preference number: 6 (lower is better)
Translates to: FLLLGIFLLELMDSF*QPSQGMVREDQSTR
Trigger: TCTGGTACTTTGGTCTTCTCTAACCATGCCTTGAGACGGCTGCAAGAACGAATCCATGAGCTCCAGGAGGAAAATTCCAAGCAGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000465510.1
CDS TCA 72 bp AAAGCCTCCTCAATGTCCAGCCTTTTCTCTCGAAGGTaGAGGGCCAGCTCAAAAAGAGCCACATCACAATTT +
Preference number: 6 (lower is better)
Translates to: KASSMSSLFSRR*RASSKRATSQF
Trigger: AAATTGTGATGTGGCTCTTTTTGAGCTGGCCCTTCACCTTCGAGAGAAAAGGCTGGACATTGAGGAGGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000461734.1
CDS GCA 72 bp TTGGAATTTTCCTCCTGGAGCTCATGGATTCGTTCTTaGAGCCGTCTCAAGGCATGGTTAGAGAAGACCAAA +
Preference number: 6 (lower is better)
Translates to: LEFSSWSSWIRS*SRLKAWLEKTK
Trigger: TTTGGTCTTCTCTAACCATGCCTTGAGACGGCTGCAAGAACGAATCCATGAGCTCCAGGAGGAAAATTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000465510.1
CDS CCA 72 bp AGCTCATGGATTCGTTCTTGCAGCCGTCTCAAGGCATaGTTAGAGAAGACCAAAGTACCAGAAAGATCGCTA +
Preference number: 6 (lower is better)
Translates to: SSWIRSCSRLKA*LEKTKVPERSL
Trigger: TAGCGATCTTTCTGGTACTTTGGTCTTCTCTAACCATGCCTTGAGACGGCTGCAAGAACGAATCCATGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000465510.1
CDS CCA 72 bp TTCAATAGCTCCAGAATGGAAGGAGAAGAGGCATTCTaGGTCCTGGGTCTGAGAATAGATAGACAGCTTACT +
Preference number: 6 (lower is better)
Translates to: FNSSRMEGEEAF*VLGLRIDRQLT
Trigger: AGTAAGCTGTCTATCTATTCTCAGACCCAGGACCCAGAATGCCTCTTCTCCTTCCATTCTGGAGCTATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465186.1
CDS CAA 90 bp CATTCTCGATACTGTAGGCTTTGGGATCTTCAATGTCTTCTGGAATaGGCTCTGTTTCAATTCCAAACCTGGGAGATGGAACTTTGGCCT +
Preference number: 6 (lower is better)
Translates to: HSRYCRLWDLQCLLE*ALFQFQTWEMELWP
Trigger: AGGCCAAAGTTCCATCTCCCAGGTTTGGAATTGAAACAGAGCCAATTCCAGAAGACATTGAAGATCCCAAAGCCTACAGTATCGAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295868.6
ENST00000393845.9
CDS CAA 90 bp AGCTGTTTACGTCTCTCTCTCCATTCTTTGTTAAGTTTTTGCTGCTaGGAATTTTCCTCCTGGAGCTCATGGATTCGTTCTTGCAGCCGT +
Preference number: 6 (lower is better)
Translates to: SCLRLSLHSLLSFCC*EFSSWSSWIRSCSR
Trigger: ACGGCTGCAAGAACGAATCCATGAGCTCCAGGAGGAAAATTCCAAGCAGCAAAAACTTAACAAAGAATGGAGAGAGAGACGTAAACAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393845.9
ENST00000461734.1
ENST00000465510.1
ENST00000489244.1
CDS TCA 72 bp TGGATACACAAGTGTGAGAAGATCCAGTGGTATGTTTaGATCCAGAGTCACAAAAGGCATCGAAGCAAGCTC +
Preference number: 6 (lower is better)
Translates to: WIHKCEKIQWYV*IQSHKRHRSKL
Trigger: GAGCTTGCTTCGATGCCTTTTGTGACTCTGGATTCAAACATACCACTGGATCTTCTCACACTTGTGTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479422.1
CDS GCA 72 bp GGTGGCACAAGCACTCCTAAGAGAGAATTTAACTTGTaGAGAAGTCCTGTGGCAGGAAATAACAGAACTCAA +
Preference number: 6 (lower is better)
Translates to: GGTSTPKREFNL*RSPVAGNNRTQ
Trigger: TTGAGTTCTGTTATTTCCTGCCACAGGACTTCTGCACAAGTTAAATTCTCTCTTAGGAGTGCTTGTGCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475568.1
CDS CCA 72 bp AATTCAGAAAGATCAGTTGGTTCCCAGCTATGTATATaGCGATACTGTCGTCCAGAAGTTGTAGGTTGGCTC +
Preference number: 6 (lower is better)
Translates to: NSERSVGSQLCI*RYCRPEVVGWL
Trigger: GAGCCAACCTACAACTTCTGGACGACAGTATCGCCATATACATAGCTGGGAACCAACTGATCTTTCTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295868.6
ENST00000393845.9
CDS CAA 72 bp GGATATGTGAAGAGTCGACTGAATGTTCTTCAGTTCTaGTACCAGGCACTGTATTTCCTCAACAACAGCCAC +
Preference number: 6 (lower is better)
Translates to: GYVKSRLNVLQF*YQALYFLNNSH
Trigger: GTGGCTGTTGTTGAGGAAATACAGTGCCTGGTACAAGAACTGAAGAACATTCAGTCGACTCTTCACATATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS CAA 72 bp GAAGGTGGCACAAGCACTCCTAAGAGAGAATTTAACTaGTGCAGAAGTCCTGTGGCAGGAAATAACAGAACT +
Preference number: 6 (lower is better)
Translates to: EGGTSTPKREFN*CRSPVAGNNRT
Trigger: AGTTCTGTTATTTCCTGCCACAGGACTTCTGCACAAGTTAAATTCTCTCTTAGGAGTGCTTGTGCCACCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475568.1
CDS CAA 90 bp TCGCAGGTAGATCTGTTCCTTGGTTTTCAAATTCAGAAAGATCAGTaGGTTCCCAGCTATGTATATGGCGATACTGTCGTCCAGAAGTTG +
Preference number: 6 (lower is better)
Translates to: SQVDLFLGFQIQKDQ*VPSYVYGDTVVQKL
Trigger: CAACTTCTGGACGACAGTATCGCCATATACATAGCTGGGAACCAACTGATCTTTCTGAATTTGAAAACCAAGGAACAGATCTACCTGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295868.6
ENST00000393845.9
CDS TCA 72 bp AGAATGTACAAGTGTGAGAAGATCCAGTGGTATGTTTaGATCCAGAGTCACAAAAGGCATCGAAGCAAGCTC +
Preference number: 6 (lower is better)
Translates to: RMYKCEKIQWYV*IQSHKRHRSKL
Trigger: GAGCTTGCTTCGATGCCTTTTGTGACTCTGGATTCAAACATACCACTGGATCTTCTCACACTTGTACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295868.6
ENST00000393845.9
CDS CCA 72 bp GTCTCTGAAGATAGACTGGTATGCCTAAAGCAGATATaGTACACTACACGATCAAAGGACAAAGGAGAGTGT +
Preference number: 6 (lower is better)
Translates to: VSEDRLVCLKQI*YTTRSKDKGEC
Trigger: ACACTCTCCTTTGTCCTTTGATCGTGTAGTGTACCATATCTGCTTTAGGCATACCAGTCTATCTTCAGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473143.1
CDS CAA 90 bp TATGTGCTTGGATATGTGAAGAGTCGACTGAATGTTCTTCAGTTCTaGTACCAGGCACTGTATTTCCTCAACAACAGCCACTTTAAGGTC +
Preference number: 6 (lower is better)
Translates to: YVLGYVKSRLNVLQF*YQALYFLNNSHFKV
Trigger: GACCTTAAAGTGGCTGTTGTTGAGGAAATACAGTGCCTGGTACAAGAACTGAAGAACATTCAGTCGACTCTTCACATATCCAAGCACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS CCA 72 bp TGTATATGGCGATACTGTCGTCCAGAAGTTGTAGGTTaGCTCGCTTTCTACAGTCATAACCAAAAGAATGTA +
Preference number: 6 (lower is better)
Translates to: CIWRYCRPEVVG*LAFYSHNQKNV
Trigger: TACATTCTTTTGGTTATGACTGTAGAAAGCGAGCCAACCTACAACTTCTGGACGACAGTATCGCCATATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295868.6
ENST00000393845.9
CDS CCA 72 bp ATCTGTTCCTTGGTTTTCAAATTCAGAAAGATCAGTTaGTTCCCAGCTATGTATATGGCGATACTGTCGTCC +
Preference number: 6 (lower is better)
Translates to: ICSLVFKFRKIS*FPAMYMAILSS
Trigger: GGACGACAGTATCGCCATATACATAGCTGGGAACCAACTGATCTTTCTGAATTTGAAAACCAAGGAACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295868.6
ENST00000393845.9
CDS CCA 72 bp AGCATTTATTCTCATGTGCTCAGGTATCTTGTAGTCTaGGGCTGTCTTCAGATTGAAATCTCCCATATACAC +
Preference number: 6 (lower is better)
Translates to: SIYSHVLRYLVV*GCLQIEISHIH
Trigger: GTGTATATGGGAGATTTCAATCTGAAGACAGCCCCAGACTACAAGATACCTGAGCACATGAGAATAAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS CCA 72 bp CTCGTCTCTCTTCATAATTTCCAGCTCCACATCCGTTaGCTCTGCTTTTTCAAATTCCAAACACTTTGGTAT +
Preference number: 6 (lower is better)
Translates to: LVSLHNFQLHIR*LCFFKFQTLWY
Trigger: ATACCAAAGTGTTTGGAATTTGAAAAAGCAGAGCCAACGGATGTGGAGCTGGAAATTATGAAGAGAGACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS CCA 72 bp ACCCTATGTTTCCTCAACATTCTTCTACGATATGCCTaGCAAGCAGAATGGAACACTAGTTCTATTTGGATC +
Preference number: 6 (lower is better)
Translates to: TLCFLNILLRYA*QAEWNTSSIWI
Trigger: GATCCAAATAGAACTAGTGTTCCATTCTGCTTGCCAGGCATATCGTAGAAGAATGTTGAGGAAACATAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473143.1
CDS CAA 90 bp TCCTCAACAACAGCCACTTTAAGGTCTCTAAGAGAGAGAATGCACTaGTTCATGTGCCTTTTATTTCCATGGACCAAAGAATCTAGGTGT +
Preference number: 6 (lower is better)
Translates to: SSTTATLRSLRERMH*FMCLLFPWTKESRC
Trigger: ACACCTAGATTCTTTGGTCCATGGAAATAAAAGGCACATGAACAAGTGCATTCTCTCTCTTAGAGACCTTAAAGTGGCTGTTGTTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS GCA 72 bp TGTTATATCTTCCTGGTCTCTGAAGATAGACTGGTATaGCTAAAGCAGATATGGTACACTACACGATCAAAG +
Preference number: 6 (lower is better)
Translates to: CYIFLVSEDRLV*LKQIWYTTRSK
Trigger: CTTTGATCGTGTAGTGTACCATATCTGCTTTAGGCATACCAGTCTATCTTCAGAGACCAGGAAGATATAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473143.1
CDS CAA 72 bp ACAGCCACTTTAAGGTCTCTAAGAGAGAGAATGCACTaGTTCATGTGCCTTTTATTTCCATGGACCAAAGAA +
Preference number: 6 (lower is better)
Translates to: TATLRSLRERMH*FMCLLFPWTKE
Trigger: TTCTTTGGTCCATGGAAATAAAAGGCACATGAACAAGTGCATTCTCTCTCTTAGAGACCTTAAAGTGGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393845.9
CDS GCA 72 bp AACTTTTTACAAGCCTGCTATGAGGGTTACTTAAACTaGCACACTGTTATATCTTCCTGGTCTCTGAAGATA +
Preference number: 6 (lower is better)
Translates to: NFLQACYEGYLN*HTVISSWSLKI
Trigger: TATCTTCAGAGACCAGGAAGATATAACAGTGTGGCAGTTTAAGTAACCCTCATAGCAGGCTTGTAAAAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473143.1
CDS CCA 72 bp CTCAACATTCTTCTACGATATGCCTGGCAAGCAGAATaGAACACTAGTTCTATTTGGATCAGATTTATAGTT +
Preference number: 6 (lower is better)
Translates to: LNILLRYAWQAE*NTSSIWIRFIV
Trigger: AACTATAAATCTGATCCAAATAGAACTAGTGTTCCATTCTGCTTGCCAGGCATATCGTAGAAGAATGTTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473143.1
CDS CAA 72 bp TTTGAAAGCTGTTTTTCTGTGCATCTCAGCACGGATTaGGGAATCTACATCAAAATCTGTTCGTTTAAACTG +
Preference number: 6 (lower is better)
Translates to: FESCFSVHLSTD*GIYIKICSFKL
Trigger: CAGTTTAAACGAACAGATTTTGATGTAGATTCCCAAATCCGTGCTGAGATGCACAGAAAAACAGCTTTCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000490481.1
CDS CAA 72 bp AATTCGAACAACTCCATCTTCAAATCCTACAATAATTaGTGCTCCAGTGAAGTTTACCTCGACTTATGGCTT +
Preference number: 6 (lower is better)
Translates to: NSNNSIFKSYNN*CSSEVYLDLWL
Trigger: AAGCCATAAGTCGAGGTAAACTTCACTGGAGCACAAATTATTGTAGGATTTGAAGATGGAGTTGTTCGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475568.1
CDS TCA 72 bp CAAAATTCTTCAGGAGAAGTATTTCTTGAAATAAGGTaGCATGGTGCAGGTCAGATAATTTCATCTGAGTAT +
Preference number: 6 (lower is better)
Translates to: QNSSGEVFLEIR*HGAGQIISSEY
Trigger: ATACTCAGATGAAATTATCTGACCTGCACCATGTCACCTTATTTCAAGAAATACTTCTCCTGAAGAATTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393845.9
ENST00000461734.1