Pregenerated sensors for CFAP36 (Homo sapiens)
Ensembl gene IDs: ENSG00000163001Ensembl transcript IDs: ENST00000339012.7, ENST00000349456.9, ENST00000403007.4, ENST00000406691.7, ENST00000407816.7, ENST00000481791.1, ENST00000490934.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAATATACAATAGCAAGAGTGAACCCTAATGTAAACTATGCTCTTTaGTTGGTAATGTTGTGTCAAGGAAGGTTCACCAACGTAACAAAT | + |
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Preference number: 1 (lower is better) Translates to: EYTIARVNPNVNYAL*LVMLCQGRFTNVTN Trigger: ATTTGTTACGTTGGTGAACCTTCCTTGACACAACATTACCAACCAAAGAGCATAGTTTACATTAGGGTTCACTCTTGCTATTGTATATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| 3UTR CAA 90 bp | TATACAATAGCAAGAGTGAACCCTAATGTAAACTATGCTCTTTGGTaGGTAATGTTGTGTCAAGGAAGGTTCACCAACGTAACAAATGTA | + |
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Preference number: 2 (lower is better) Translates to: YTIARVNPNVNYALW*VMLCQGRFTNVTNV Trigger: TACATTTGTTACGTTGGTGAACCTTCCTTGACACAACATTACCAACCAAAGAGCATAGTTTACATTAGGGTTCACTCTTGCTATTGTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| 3UTR CCA 72 bp | ATAGCAAGAGTGAACCCTAATGTAAACTATGCTCTTTaGTTGGTAATGTTGTGTCAAGGAAGGTTCACCAAC | + |
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Preference number: 3 (lower is better) Translates to: IARVNPNVNYAL*LVMLCQGRFTN Trigger: GTTGGTGAACCTTCCTTGACACAACATTACCAACCAAAGAGCATAGTTTACATTAGGGTTCACTCTTGCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| 3UTR-3UTR CAA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAAGTCATAATTTCACCATaGAAGAGTTCGGTGATCTTG | + |
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Preference number: 3 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKVIISP*KSSVIL Trigger: CAAGATCACCGAACTCTTCAATGGTGAAATTATGAC...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CCA 90 bp | ACTGTGGAAACAGTAAAAGATCAGTGGTTGCCATGGGCTAGGAGGTGGGAAGGACCACAAAGTCCAAGATaGGGATGGACCAGTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: TVETVKDQWLPWARRWEGPQSPR*GWTSLG Trigger: GCCCAGACTGGTCCATCCCCATCTTGGACTTTGTGG...TCCTTCCCACCTCCTAGCCCATGGCAACCACTGATCTTTTACTGTTTCCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR GCA 90 bp | GTACTAGGGCAGGGACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTAGCAGGAACCCCGCGATaGTCTCCACTACCCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: VLGQGLYGGNLCTFCSILAGTPR*SPLPTP Trigger: TGGAGTGGGTAGTGGAGAGCATCGCGGGGTTCCTGC...TAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGTCCCTGCCCTAGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR TCA 90 bp | ACTGTGGAAACAGTAAAAGATCAGTGGTTGCCATGGGCTAGGAGGTGGGAAGGAAGGAGGTGGGAAGGATaGATAGGCAGAGCACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: TVETVKDQWLPWARRWEGRRWEG*IGRAQR Trigger: TCTTTGTGCTCTGCCTATTCATCCTTCCCACCTCCT...TCCTTCCCACCTCCTAGCCCATGGCAACCACTGATCTTTTACTGTTTCCACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CCA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAAGGGGATGGACCAGTCTaGGCCTCGCAGGAACCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKGDGPV*ASQEPR Trigger: GCGGGGTTCCTGCGAGGCCCAGACTGGTCCATCCCC...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CCA 90 bp | GTACTAGGGCAGGGACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTAGATCAGTGGTTGCCATaGGCTAGGAGGTGGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: VLGQGLYGGNLCTFCSILDQWLP*ARRWEG Trigger: TCCTTCCCACCTCCTAGCCCATGGCAACCACTGATC...TAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGTCCCTGCCCTAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR TCA 90 bp | ACTGTGGAAACAGTAAAAGATCAGTGGTTGCCATGGGCTAGGAGGTGGGAAGGATTGCAAAATGGCCTGTaGTGTATGGGTCTTTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: TVETVKDQWLPWARRWEGLQNGL*CMGLCK Trigger: CTTGCAAAGACCCATACATCACAGGCCATTTTGCAA...TCCTTCCCACCTCCTAGCCCATGGCAACCACTGATCTTTTACTGTTTCCACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR TCA 90 bp | GTACTAGGGCAGGGACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTAGTCGCTCAGCTTCCTTaGATTTCTGAGGGTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGQGLYGGNLCTFCSILVAQLP*ISEGGC Trigger: ACACCCACCCTCAGAAATTCAAGGAAGCTGAGCGAC...TAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGTCCCTGCCCTAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CCA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAACCCCGGTTAGGCCTTTaGGCCACAAGGAGCCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKPRLGL*ATRSRE Trigger: CTCTCGGCTCCTTGTGGCCCAAAGGCCTAACCGGGG...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CCA 90 bp | ACTGTGGAAACAGTAAAAGATCAGTGGTTGCCATGGGCTAGGAGGTGGGAAGGAACACAGGTTGCAAAATaGCCTGTGATGTATGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TVETVKDQWLPWARRWEGTQVAK*PVMYGS Trigger: AGACCCATACATCACAGGCCATTTTGCAACCTGTGT...TCCTTCCCACCTCCTAGCCCATGGCAACCACTGATCTTTTACTGTTTCCACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR GCA 90 bp | GTACTAGGGCAGGGACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTAGCAGCTTCACTGGAATaGACTGTGGGCTCTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: VLGQGLYGGNLCTFCSILAASLE*TVGSSV Trigger: AACAGAAGAGCCCACAGTGCATTCCAGTGAAGCTGC...TAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGTCCCTGCCCTAGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR GCA 90 bp | ACTGTGGAAACAGTAAAAGATCAGTGGTTGCCATGGGCTAGGAGGTGGGAAGGAGATAGTAAAATCTTCTaGTGCCAACACAGGTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: TVETVKDQWLPWARRWEGDSKIF*CQHRLQ Trigger: TTGCAACCTGTGTTGGCAGCAGAAGATTTTACTATC...TCCTTCCCACCTCCTAGCCCATGGCAACCACTGATCTTTTACTGTTTCCACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR TCA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAACGTGTTCAAGGTCACTaGCCACATCAGAGCCATCGG | + |
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Preference number: 4 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKRVQGH*PHQSHR Trigger: CCGATGGCTCTGATGTGGTCAGTGACCTTGAACACG...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR GCA 90 bp | ACTGTGGAAACAGTAAAAGATCAGTGGTTGCCATGGGCTAGGAGGTGGGAAGGAATTATTCGAATGGCTTaGAGCTGCATTTCAATGTTT | + |
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Preference number: 4 (lower is better) Translates to: TVETVKDQWLPWARRWEGIIRMA*SCISMF Trigger: AAACATTGAAATGCAGCTGCAAGCCATTCGAATAAT...TCCTTCCCACCTCCTAGCCCATGGCAACCACTGATCTTTTACTGTTTCCACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR TCA 90 bp | GTACTAGGGCAGGGACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTATCTTCAGCAGATAAATaGATAAACAAACCGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: VLGQGLYGGNLCTFCSILSSADK*INKPWH Trigger: GTGCCACGGTTTGTTTATTCATTTATCTGCTGAAGA...TAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGTCCCTGCCCTAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR TCA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAAGCTTCCTTGAATTTCTaGGGGTGGGTGTGCAAAATG | + |
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Preference number: 4 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKASLNF*GWVCKM Trigger: CATTTTGCACACCCACCCTCAGAAATTCAAGGAAGC...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR GCA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAAGCTGCCAACACAGGTTaGAAAATGGCCTGTGATGTA | + |
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Preference number: 4 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKAANTG*KMACDV Trigger: TACATCACAGGCCATTTTGCAACCTGTGTTGGCAGC...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR GCA 90 bp | GTACTAGGGCAGGGACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTAAGTAAAATCTTCTGCTaGCAACACAGGTTGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLGQGLYGGNLCTFCSILSKIFC*QHRLQN Trigger: ATTTTGCAACCTGTGTTGGCAGCAGAAGATTTTACT...TAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGTCCCTGCCCTAGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR GCA 90 bp | GTACTAGGGCAGGGACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTAGGAATTATTCATTATTaGAGCTTCACTGGAATGCAC | + |
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Preference number: 4 (lower is better) Translates to: VLGQGLYGGNLCTFCSILGIIHY*SFTGMH Trigger: GTGCATTCCAGTGAAGCTGCAATAATGAATAATTCC...TAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGTCCCTGCCCTAGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CCA 90 bp | GTACTAGGGCAGGGACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTATTCCTTTCTTCTTCCTaGTCATATTCCTCTTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: VLGQGLYGGNLCTFCSILFLSSS*SYSSFD Trigger: ATCAAAAGAGGAATATGACCAGGAAGAAGAAAGGAA...TAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGTCCCTGCCCTAGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CCA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAATTATTGCAGCTTCACTaGAATGCACTGTGGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKLLQLH*NALWAL Trigger: AAGAGCCCACAGTGCATTCCAGTGAAGCTGCAATAA...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR TCA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAAACACCATTTCTCTCTTaGATTATTCGAATGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKTPFLS*IIRMAC Trigger: GCAAGCCATTCGAATAATTCAAGAGAGAAATGGTGT...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CCA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAACTTGAATTATTCGAATaGCTTGCAGCTGCATTTCAA | + |
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Preference number: 4 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKLELFE*LAAAFQ Trigger: TTGAAATGCAGCTGCAAGCCATTCGAATAATTCAAG...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CCA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAATGTTCACCATCCCCTTaGGAATTATTCATTATTGCA | + |
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Preference number: 4 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKCSPSP*ELFIIA Trigger: TGCAATAATGAATAATTCCCAAGGGGATGGTGAACA...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CCA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAAGTAAACTATGCTCTTTaGTTGGTAATGTTGTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKVNYAL*LVMLCQ Trigger: TTGACACAACATTACCAACCAAAGAGCATAGTTTAC...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CCA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAAAGCCATGACAAGACATaGAGAAATCTTAAATGGATT | + |
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Preference number: 4 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKSHDKT*RNLKWI Trigger: AATCCATTTAAGATTTCTCCATGTCTTGTCATGGCT...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS GCA 90 bp | CCAAGATGGGGATGGACCAGTCTGGGCCTCGCAGGAACCCCGCGATaGTCTCCACTACCCACTCCACCTCGTCTTCTTCTTCCGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: PRWGWTSLGLAGTPR*SPLPTPPRLLLPQP Trigger: TGGCTGCGGAAGAAGAAGACGAGGTGGAGTGGGTAGTGGAGAGCATCGCGGGGTTCCTGCGAGGCCCAGACTGGTCCATCCCCATCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000403007.4 ENST00000406691.7 ENST00000407816.7 |
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| CDS CCA 90 bp | TTCACATTTCTGTTCCACAAAGTCCAAGATGGGGATGGACCAGTCTaGGCCTCGCAGGAACCCCGCGATGCTCTCCACTACCCACTCCAC | + |
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Preference number: 5 (lower is better) Translates to: FTFLFHKVQDGDGPV*ASQEPRDALHYPLH Trigger: GTGGAGTGGGTAGTGGAGAGCATCGCGGGGTTCCTGCGAGGCCCAGACTGGTCCATCCCCATCTTGGACTTTGTGGAACAGAAATGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000403007.4 ENST00000406691.7 ENST00000407816.7 |
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| CDS-3UTR CAA 90 bp | ACTGTGGAAACAGTAAAAGATCAGTGGTTGCCATGGGCTAGGAGGTGGGAAGGAGTAAAAGATCAGTGGTaGCCATGGGCTAGGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: TVETVKDQWLPWARRWEGVKDQW*PWARRW Trigger: CCACCTCCTAGCCCATGGCAACCACTGATCTTTTAC...TCCTTCCCACCTCCTAGCCCATGGCAACCACTGATCTTTTACTGTTTCCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS CCA 90 bp | AACAAGGGGAACACAGGCCACCAAAATCACCGGCTCTGGGCTTCCTaGAGTTATCACATGCCCTCCTTTGCAGTTAACTTCACATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: NKGNTGHQNHRLWAS*SYHMPSFAVNFTFL Trigger: CAGAAATGTGAAGTTAACTGCAAAGGAGGGCATGTGATAACTCCAGGAAGCCCAGAGCCGGTGATTTTGGTGGCCTGTGTTCCCCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339012.7 |
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| CDS CCA 90 bp | GGTGGTGTTTTCCCCCTACCCACAGACAACAGCGCTATTAGCTGCTaGGGAAAGCATCTTGGGATTCTAGTAGATGATTATGATGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: GGVFPLPTDNSAISC*GKHLGILVDDYDGG Trigger: GCCACCATCATAATCATCTACTAGAATCCCAAGATGCTTTCCCCAGCAGCTAATAGCGCTGTTGTCTGTGGGTAGGGGGAAAACACCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490934.1 |
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| CDS TCA 90 bp | ACCATTGAAGAGTTCGGTGATCTTGGACAAGTCGCTCAGCTTCCTTaGATTTCTGAGGGTGGGTGTGCAAAATGTTCACCATCCCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: TIEEFGDLGQVAQLP*ISEGGCAKCSPSPW Trigger: CCAAGGGGATGGTGAACATTTTGCACACCCACCCTCAGAAATTCAAGGAAGCTGAGCGACTTGTCCAAGATCACCGAACTCTTCAATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS CCA 90 bp | ATCTTCAGGTCTGAGGGTGGGTGTGCAAAATGTTCACCATCCCCTTaGGAATTATTCATTATTGCAGCTTCACTGGAATGCACTGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: IFRSEGGCAKCSPSP*ELFIIAASLECTVG Trigger: GCCCACAGTGCATTCCAGTGAAGCTGCAATAATGAATAATTCCCAAGGGGATGGTGAACATTTTGCACACCCACCCTCAGACCTGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407816.7 |
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| CDS-3UTR CAA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAAACCCCGGTTAGGCCTTaGGGCCACAAGGAGCCGAGA | + |
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Preference number: 5 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKTPVRP*GHKEPR Trigger: TCTCGGCTCCTTGTGGCCCAAAGGCCTAACCGGGGT...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS GCA 90 bp | GTTCCAAGTACTGATAAGTTTGCTATTGGTCCTTCAATGCTCGCATaGTCTAAGCCAGGAATCTTCAGGTCTGAGGGTGGGTGTGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: VPSTDKFAIGPSMLA*SKPGIFRSEGGCAK Trigger: TTTTGCACACCCACCCTCAGACCTGAAGATTCCTGGCTTAGAGCATGCGAGCATTGAAGGACCAATAGCAAACTTATCAGTACTTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407816.7 |
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| CDS GCA 90 bp | GTTCCAAGTACTGATAAGTTTGCTATTGGTCCTTCAATGCTCGCATaGTCTAAGCCAGGAATCTTCAGGTCTTTTTGTGGGAGGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: VPSTDKFAIGPSMLA*SKPGIFRSFCGREE Trigger: TTCCTCCCTCCCACAAAAAGACCTGAAGATTCCTGGCTTAGAGCATGCGAGCATTGAAGGACCAATAGCAAACTTATCAGTACTTGGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000490934.1 |
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| CDS-3UTR CAA 90 bp | GTACTAGGGCAGGGACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTAGTGATGTATGGGTCTTaGCAAGAGGAGAAGTGCATG | + |
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Preference number: 5 (lower is better) Translates to: VLGQGLYGGNLCTFCSILVMYGS*QEEKCM Trigger: CATGCACTTCTCCTCTTGCAAAGACCCATACATCAC...TAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGTCCCTGCCCTAGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS TCA 90 bp | TCCTCATATCCTTTCTCATGGACATCAACTTATCTCTCTTCTGCTTaGGATAGTGTTCTCGTTGCCGAAGTTCTTCTGTTCCAAGTACTG | + |
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Preference number: 5 (lower is better) Translates to: SSYPFSWTSTYLSSA*DSVLVAEVLLFQVL Trigger: CAGTACTTGGAACAGAAGAACTTCGGCAACGAGAACACTATCTCAAGCAGAAGAGAGATAAGTTGATGTCCATGAGAAAGGATATGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000407816.7 ENST00000481791.1 |
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| CDS-3UTR CAA 90 bp | GTACTAGGGCAGGGACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTAAACTATGCTCTTTGGTaGGTAATGTTGTGTCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: VLGQGLYGGNLCTFCSILNYALW*VMLCQG Trigger: TCCTTGACACAACATTACCAACCAAAGAGCATAGTT...TAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGTCCCTGCCCTAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CAA 90 bp | GTACTAGGGCAGGGACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTATACACCATTTCTCTCTaGAATTATTCGAATGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: VLGQGLYGGNLCTFCSILYTISL*NYSNGL Trigger: CAAGCCATTCGAATAATTCAAGAGAGAAATGGTGTA...TAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGTCCCTGCCCTAGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS GCA 90 bp | TCGAATGGCTTGCAGCTGCATTTCAATGTTTTTCTGGACCATCATTaGTTTAAAGATAGTAAAATCTTCTGCTGCCAACACAGGTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: SNGLQLHFNVFLDHH*FKDSKIFCCQHRLQ Trigger: TTGCAACCTGTGTTGGCAGCAGAAGATTTTACTATCTTTAAAGCAATGATGGTCCAGAAAAACATTGAAATGCAGCTGCAAGCCATTCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000403007.4 ENST00000406691.7 ENST00000407816.7 |
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| CDS-3UTR CAA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAACTTTGGTTGGTAATGTaGTGTCAAGGAAGGTTCACC | + |
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Preference number: 5 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKLWLVM*CQGRFT Trigger: GGTGAACCTTCCTTGACACAACATTACCAACCAAAG...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS CCA 90 bp | TTAAGCAGTCAGGTAATACACCATTTCTCTCTTGAATTATTCGAATaGCTTGCAGCTGCATTTCAATGTTTTTCTGGACCATCATTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LSSQVIHHFSLELFE*LAAAFQCFSGPSLL Trigger: AAGCAATGATGGTCCAGAAAAACATTGAAATGCAGCTGCAAGCCATTCGAATAATTCAAGAGAGAAATGGTGTATTACCTGACTGCTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000403007.4 ENST00000406691.7 ENST00000407816.7 |
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| CDS-3UTR CAA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAAATGTTCACCATCCCCTaGGGAATTATTCATTATTGC | + |
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Preference number: 5 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKMFTIP*GIIHYC Trigger: GCAATAATGAATAATTCCCAAGGGGATGGTGAACAT...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS-3UTR CAA 90 bp | ACTATATGGGGGAAATCTCTGTACCTTCTGCTCAATTTTACTGTGAACCTAAAAAATTATTCGAATGGCTaGCAGCTGCATTTCAATGTT | + |
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Preference number: 5 (lower is better) Translates to: TIWGKSLYLLLNFTVNLKNYSNG*QLHFNV Trigger: AACATTGAAATGCAGCTGCAAGCCATTCGAATAATT...TTTTAGGTTCACAGTAAAATTGAGCAGAAGGTACAGAGATTTCCCCCATATAGT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000406691.7 |
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| CDS CAA 72 bp | ATCCCTAGGCCAGACCGCCGGACCCCGGTTAGGCCTTaGGGCCACAAGGAGCCGAGAGGGAGTAGGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: IPRPDRRTPVRP*GHKEPRGSRGR Trigger: TCTTCCCCTACTCCCTCTCGGCTCCTTGTGGCCCAAAGGCCTAACCGGGGTCCGGCGGTCTGGCCTAGGGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339012.7 ENST00000406691.7 ENST00000407816.7 |
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| CDS CCA 72 bp | AACAAGGGGAACACAGGCCACCAAAATCACCGGCTCTaGGCTTCCTGGAGTTATCACATGCCCTCCTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: NKGNTGHQNHRL*ASWSYHMPSFA Trigger: TGCAAAGGAGGGCATGTGATAACTCCAGGAAGCCCAGAGCCGGTGATTTTGGTGGCCTGTGTTCCCCTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339012.7 |
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| CDS CCA 72 bp | AACACAGGCCACCAAAATCACCGGCTCTGGGCTTCCTaGAGTTATCACATGCCCTCCTTTGCAGTTAACTTC | + |
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Preference number: 6 (lower is better) Translates to: NTGHQNHRLWAS*SYHMPSFAVNF Trigger: GAAGTTAACTGCAAAGGAGGGCATGTGATAACTCCAGGAAGCCCAGAGCCGGTGATTTTGGTGGCCTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339012.7 |
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| CDS TCA 72 bp | CCCTCAGGATTTTCATCTCTTCGTGTTCAAGGTCACTaGCCACATCAGAGCCATCGGTTAAGCAGTCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: PSGFSSLRVQGH*PHQSHRLSSQV Trigger: TACCTGACTGCTTAACCGATGGCTCTGATGTGGTCAGTGACCTTGAACACGAAGAGATGAAAATCCTGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000403007.4 ENST00000406691.7 ENST00000407816.7 ENST00000490934.1 |
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| CDS GCA 72 bp | AAAATCACCGGCTCTGGGCTTCCTGGAGTTATCACATaGCCTCCTTTGCAGTTAACTTCACATTTCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: KITGSGLPGVIT*PPLQLTSHFCS Trigger: GGAACAGAAATGTGAAGTTAACTGCAAAGGAGGGCATGTGATAACTCCAGGAAGCCCAGAGCCGGTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339012.7 |
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| CDS GCA 72 bp | TTCCAAGTACTGATAAGTTTGCTATTGGTCCTTCAATaGTCGCATGCTCTAAGCCAGGAATCTTCAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: FQVLISLLLVLQ*SHALSQESSGL Trigger: CAGACCTGAAGATTCCTGGCTTAGAGCATGCGAGCATTGAAGGACCAATAGCAAACTTATCAGTACTTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407816.7 |
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| CDS GCA 72 bp | AGTGATGTCGTTTACTTACTGCTATTGGTCCTTCAATaGTCGCATGCTCTAAGCCAGGAATCTTCAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SDVVYLLLLVLQ*SHALSQESSGL Trigger: AAGACCTGAAGATTCCTGGCTTAGAGCATGCGAGCATTGAAGGACCAATAGCAGTAAGTAAACGACATCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481791.1 |
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| CDS GCA 72 bp | TTCCAAGTACTGATAAGTTTGCTATTGGTCCTTCAATaGTCGCATGCTCTAAGCCAGGAATCTTCAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: FQVLISLLLVLQ*SHALSQESSGL Trigger: AAGACCTGAAGATTCCTGGCTTAGAGCATGCGAGCATTGAAGGACCAATAGCAAACTTATCAGTACTTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000490934.1 |
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| CDS CAA 72 bp | ACACAGGTTGCAAAATGGCCTGTGATGTATGGGTCTTaGCAAGAGGAGAAGTGCATGCTTCTTGAAATTGAT | + |
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Preference number: 6 (lower is better) Translates to: TQVAKWPVMYGS*QEEKCMLLEID Trigger: ATCAATTTCAAGAAGCATGCACTTCTCCTCTTGCAAAGACCCATACATCACAGGCCATTTTGCAACCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000403007.4 ENST00000406691.7 ENST00000407816.7 |
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| CDS CAA 90 bp | CATTTCCTCTACCTCCCCAGTGGGTTTTCCTTTCTGCTCCATATTTaGTATCTGTTTAGTCCTCATATCCTTTCTCATGGACATCAACTT | + |
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Preference number: 6 (lower is better) Translates to: HFLYLPSGFSFLLHI*YLFSPHILSHGHQL Trigger: AAGTTGATGTCCATGAGAAAGGATATGAGGACTAAACAGATACAAAATATGGAGCAGAAAGGAAAACCCACTGGGGAGGTAGAGGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000407816.7 ENST00000481791.1 |
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| CDS CCA 72 bp | CAGGTAATACACCATTTCTCTCTTGAATTATTCGAATaGCTTGCAGCTGCATTTCAATGTTTTTCTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: QVIHHFSLELFE*LAAAFQCFSGP Trigger: TGGTCCAGAAAAACATTGAAATGCAGCTGCAAGCCATTCGAATAATTCAAGAGAGAAATGGTGTATTACCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000403007.4 ENST00000406691.7 ENST00000407816.7 |
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| CDS GCA 72 bp | TTGCAGCTGCATTTCAATGTTTTTCTGGACCATCATTaGTTTAAAGATAGTAAAATCTTCTGCTGCCAACAC | + |
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Preference number: 6 (lower is better) Translates to: LQLHFNVFLDHH*FKDSKIFCCQH Trigger: GTGTTGGCAGCAGAAGATTTTACTATCTTTAAAGCAATGATGGTCCAGAAAAACATTGAAATGCAGCTGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000403007.4 ENST00000406691.7 ENST00000407816.7 |
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| CDS CCA 72 bp | ATTCGAATGGCTTGCAGCTGCATTTCAATGTTTTTCTaGACCATCATTGCTTTAAAGATAGTAAAATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: IRMACSCISMFF*TIIALKIVKSS Trigger: AGAAGATTTTACTATCTTTAAAGCAATGATGGTCCAGAAAAACATTGAAATGCAGCTGCAAGCCATTCGAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000339012.7 ENST00000349456.9 ENST00000403007.4 ENST00000406691.7 ENST00000407816.7 |
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