Pregenerated sensors for CFAP299 (Homo sapiens)
Ensembl gene IDs: ENSG00000197826Ensembl transcript IDs: ENST00000358105.8, ENST00000502497.5, ENST00000503883.1, ENST00000508314.1, ENST00000508675.1, ENST00000512931.5, ENST00000513920.5, ENST00000514249.5, ENST00000621014.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTATCTTCTTAGTGAGAAGTAAACTCACCATCCATCTATCTCCTTaGTGTCAATTTGATGTTGTCCACTGTTGTTTCTTGAAAGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: LIFLVRSKLTIHLSP*CQFDVVHCCFLKAW Trigger: CCAAGCTTTCAAGAAACAACAGTGGACAACATCAAATTGACACCAAGGAGATAGATGGATGGTGAGTTTACTTCTCACTAAGAAGATAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR TCA 90 bp | ATCTATCTCCTTGGTGTCAATTTGATGTTGTCCACTGTTGTTTCTTaGAAGCTTGGACAGAGTTTTAACCATTTTTGTATACCACTCAGT | + |
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Preference number: 1 (lower is better) Translates to: IYLLGVNLMLSTVVS*KLGQSFNHFCIPLS Trigger: ACTGAGTGGTATACAAAAATGGTTAAAACTCTGTCCAAGCTTTCAAGAAACAACAGTGGACAACATCAAATTGACACCAAGGAGATAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR-3UTR TCA 90 bp | TATACCACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATTGCCAGGGCCGTGAAACAGGTTTTCTTTaGGGCTTTTCTTTGTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: YTTQFSTAIVFFSHCQGRETGFL*GFSLSR Trigger: TCTGGACAAAGAAAAGCCTCAAAGAAAACCTGTTTC...ACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR CAA 90 bp | TTTGTATACCACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAATTATCTTGTAGGTCTTTACCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: FVYHSVFHCDCLLLS*PGPSENYLVGLYQH Trigger: GTGCTGGTAAAGACCTACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGGTATACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGTTTCCTCCCTCTGAAATGACCTTTCCCTCTAGCTGTATACCAGAAAACTTTGTGGGAGAGATTTaGATCTGTAGAGAATCAGCA | + |
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Preference number: 2 (lower is better) Translates to: VQFPPSEMTFPSSCIPENFVGEI*ICRESA Trigger: TGCTGATTCTCTACAGATGCAAATCTCTCCCACAAA...GTTTTCTGGTATACAGCTAGAGGGAAAGGTCATTTCAGAGGGAGGAAACTGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCTCTGAAATGACCTTTCCCTCTAGCTGTATACCAGAAAACTGCTTATTTCACTCAGTTTTCCACTaGGATTGTCTTCTTCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: PPSEMTFPSSCIPENCLFHSVFH*DCLLLS Trigger: TGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTG...AAATAAGCAGTTTTCTGGTATACAGCTAGAGGGAAAGGTCATTTCAGAGGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTTCTCTCATTGCCAGGGCCGTCAGAAAATTATCTTGTAGGTCTTTACCAGTAGAGAATCAGCATTaGTGGAAACAGGTTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SSSLIARAVRKLSCRSLPVENQH*WKQVFF Trigger: AAAGAAAACCTGTTTCCATCAATGCTGATTCTCTAC...TGGTAAAGACCTACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR-3UTR TCA 90 bp | GCTTATTTTAAGTTGCAGTTTAAACCGCACTTTCTAGGTGAAGTCTCCCTTATCTCCTTGGTGTCAATTTaGTGTTGTCCACTGTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: AYFKLQFKPHFLGEVSLISLVSI*CCPLLF Trigger: AAACAACAGTGGACAACATCAAATTGACACCAAGGA...GATAAGGGAGACTTCACCTAGAAAGTGCGGTTTAAACTGCAACTTAAAATAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR CAA 90 bp | ACAGCACGATTTTACTGGATCAGTAAAATCCAGAATGTGAGACATTaGAGGACAATGTTTATCAGGACCTGGTTTCTCCAACAAATCAAT | + |
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Preference number: 2 (lower is better) Translates to: TARFYWISKIQNVRH*RTMFIRTWFLQQIN Trigger: ATTGATTTGTTGGAGAAACCAGGTCCTGATAAACATTGTCCTCAAATGTCTCACATTCTGGATTTTACTGATCCAGTAAAATCGTGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513920.5 |
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| 3UTR TCA 72 bp | CATGGGAGGCTGAGACAAGAGAATTGCTTGAACCCGTaGGGTGGAAGTAGCAGTGATCCAAGATTGCACCAT | + |
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Preference number: 3 (lower is better) Translates to: HGRLRQENCLNP*GGSSSDPRLHH Trigger: ATGGTGCAATCTTGGATCACTGCTACTTCCACCTCACGGGTTCAAGCAATTCTCTTGTCTCAGCCTCCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513920.5 |
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| 3UTR-3UTR CAA 90 bp | GTCCAGTTTCCTCCCTCTGAAATGACCTTTCCCTCTAGCTGTATACCAGAAAACTGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: VQFPPSEMTFPSSCIPENCLLLS*PGPSEN Trigger: ATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACA...GTTTTCTGGTATACAGCTAGAGGGAAAGGTCATTTCAGAGGGAGGAAACTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR-3UTR CAA 90 bp | GTAATACTTTCTGCTCTCCTCCTATCGCCCTTTGTTAGTCCAGTTTCCTCCCTCCTCCTTGGTGTCAATTaGATGTTGTCCACTGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: VILSALLLSPFVSPVSSLLLGVN*MLSTVV Trigger: AACAACAGTGGACAACATCAAATTGACACCAAGGAG...GAGGGAGGAAACTGGACTAACAAAGGGCGATAGGAGGAGAGCAGAAAGTATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR TCA 72 bp | AGGATAACATCTGGATTTTGCCTTTGGTTTCAAGGGTaGTGCCATTTGCCAAGACAGGTGACACAGAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: RITSGFCLWFQG*CHLPRQVTQKQ Trigger: TTGCTTCTGTGTCACCTGTCTTGGCAAATGGCATCACCCTTGAAACCAAAGGCAAAATCCAGATGTTATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513920.5 |
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| 3UTR-3UTR CAA 90 bp | TTTCTAGGTGAAGTCTCCCTTATCTTCTTAGTGAGAAGTAAACTCACCATCCATGGTCTTTACCAGCACTaGTTAGCGTCCTTTTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: FLGEVSLIFLVRSKLTIHGLYQH*LASFCG Trigger: CCCACAAAAGGACGCTAACAAGTGCTGGTAAAGACC...ATGGATGGTGAGTTTACTTCTCACTAAGAAGATAAGGGAGACTTCACCTAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR-3UTR CAA 90 bp | GTCCAGTTTCCTCCCTCTGAAATGACCTTTCCCTCTAGCTGTATACCAGAAAACTGTAGAGAATCAGCATaGATGGAAACAGGTTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: VQFPPSEMTFPSSCIPENCRESA*METGFL Trigger: AAGAAAACCTGTTTCCATCAATGCTGATTCTCTACA...GTTTTCTGGTATACAGCTAGAGGGAAAGGTCATTTCAGAGGGAGGAAACTGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR CCA 72 bp | TTAGTGAGAAGTAAACTCACCATCCATCTATCTCCTTaGTGTCAATTTGATGTTGTCCACTGTTGTTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: LVRSKLTIHLSP*CQFDVVHCCFL Trigger: CAAGAAACAACAGTGGACAACATCAAATTGACACCAAGGAGATAGATGGATGGTGAGTTTACTTCTCACTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR TCA 72 bp | CTTGGTGTCAATTTGATGTTGTCCACTGTTGTTTCTTaGAAGCTTGGACAGAGTTTTAACCATTTTTGTATA | + |
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Preference number: 3 (lower is better) Translates to: LGVNLMLSTVVS*KLGQSFNHFCI Trigger: TATACAAAAATGGTTAAAACTCTGTCCAAGCTTTCAAGAAACAACAGTGGACAACATCAAATTGACACCAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR CCA 90 bp | TATACCACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATTGCCAGGGCCGTCCTAGCTCCACCAACTaGCGGGCCAGGGTTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: YTTQFSTAIVFFSHCQGRPSSTN*RARVSS Trigger: GGATGAAACCCTGGCCCGCCAGTTGGTGGAGCTAGG...ACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGGTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR TCA 90 bp | TTACCAGCACTTGTTAGCGTCCTTTTGTGGGAGAGATTTGCATCTGTAGAGAATGCTCCCTTCTCCTCCTaGCCCATAGTTTCTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LPALVSVLLWERFASVENAPFSS*PIVSSL Trigger: GAGGGAAGAAACTATGGGTCAGGAGGAGAAGGGAGC...ATTCTCTACAGATGCAAATCTCTCCCACAAAAGGACGCTAACAAGTGCTGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR TCA 90 bp | TCCTATCGCCCTTTGTTAGTCCAGTTTCCTCCCTCTGAAATGACCTTTCCCTCTACCGCACTTTCTAGGTaGAGTCTCCCTTATCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SYRPLLVQFPPSEMTFPSTALSR*SLPYLL Trigger: AAGAAGATAAGGGAGACTTCACCTAGAAAGTGCGGT...AGAGGGAAAGGTCATTTCAGAGGGAGGAAACTGGACTAACAAAGGGCGATAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR GCA 90 bp | GTAATACTTTCTGCTCTCCTCCTATCGCCCTTTGTTAGTCCAGTTTCCTCCCTCGTCTTCTTCTCTCATTaGCAGGGCCGTCAGAAAATT | + |
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Preference number: 4 (lower is better) Translates to: VILSALLLSPFVSPVSSLVFFSH*QGRQKI Trigger: AATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGAC...GAGGGAGGAAACTGGACTAACAAAGGGCGATAGGAGGAGAGCAGAAAGTATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR GCA 90 bp | GTAATACTTTCTGCTCTCCTCCTATCGCCCTTTGTTAGTCCAGTTTCCTCCCTCTCTTTCAGCCAGTCTTaGAATCTCTATAGCCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VILSALLLSPFVSPVSSLSFSQS*NLYSRF Trigger: AAAGCGGCTATAGAGATTGCAAGACTGGCTGAAAGA...GAGGGAGGAAACTGGACTAACAAAGGGCGATAGGAGGAGAGCAGAAAGTATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR CCA 90 bp | CCACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATTGCCAGGGCCGTCAGAATCCATCTATCTCCTTaGTGTCAATTTGATGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: PLSFPLRLSSSLIARAVRIHLSP*CQFDVV Trigger: GACAACATCAAATTGACACCAAGGAGATAGATGGAT...TCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR TCA 90 bp | TATCGCCCTTTGTTAGTCCAGTTTCCTCCCTCTGAAATGACCTTTCCCTCTAGCCTAGGAAAGATTAACTaGGAGTCTGACACTTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: YRPLLVQFPPSEMTFPSSLGKIN*ESDTFA Trigger: AGCAAAAGTGTCAGACTCTCAGTTAATCTTTCCTAG...GCTAGAGGGAAAGGTCATTTCAGAGGGAGGAAACTGGACTAACAAAGGGCGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR TCA 90 bp | CTCTCCTCCTATCGCCCTTTGTTAGTCCAGTTTCCTCCCTCTGAAATGACCTTTTCCTTGGTGTCAATTTaGTGTTGTCCACTGTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LSSYRPLLVQFPPSEMTFSLVSI*CCPLLF Trigger: AAACAACAGTGGACAACATCAAATTGACACCAAGGA...AAAGGTCATTTCAGAGGGAGGAAACTGGACTAACAAAGGGCGATAGGAGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR CAA 72 bp | CACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAATTATCTTGTAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: HSVFHCDCLLLS*PGPSENYLVGL Trigger: AAGACCTACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR GCA 90 bp | GCACTTGTTAGCGTCCTTTTGTGGGAGAGATTTGCATCTGTAGAGAATCAGCATCACTCAGTTTTCCACTaGGATTGTCTTCTTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: ALVSVLLWERFASVENQHHSVFH*DCLLLS Trigger: TGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTG...ATGCTGATTCTCTACAGATGCAAATCTCTCCCACAAAAGGACGCTAACAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR CAA 72 bp | TCTTGTAGGTCTTTACCAGCACTTGTTAGCGTCCTTTaGTGGGAGAGATTTGCATCTGTAGAGAATCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SCRSLPALVSVL*WERFASVENQH Trigger: ATGCTGATTCTCTACAGATGCAAATCTCTCCCACAAAAGGACGCTAACAAGTGCTGGTAAAGACCTACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| 3UTR CAA 72 bp | AACCATTTTTGTATACCACTCAGTTTTCCACTGCGATaGTCTTCTTCTCTCATTGCCAGGGCCGTCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: NHFCIPLSFPLR*SSSLIARAVRK Trigger: TTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGGTATACAAAAATGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR TCA 90 bp | GCACTTGTTAGCGTCCTTTTGTGGGAGAGATTTGCATCTGTAGAGAATCAGCATGAAACAGGTTTTCTTTaGGGCTTTTCTTTGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ALVSVLLWERFASVENQHETGFL*GFSLSR Trigger: TCTGGACAAAGAAAAGCCTCAAAGAAAACCTGTTTC...ATGCTGATTCTCTACAGATGCAAATCTCTCCCACAAAAGGACGCTAACAAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR TCA 90 bp | GCTTATTTTAAGTTGCAGTTTAAACCGCACTTTCTAGGTGAAGTCTCCCTTATCTTCCTCCCTCTGAAATaGCCTTTCCCTCTAGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: AYFKLQFKPHFLGEVSLIFLPLK*PFPLAV Trigger: TACAGCTAGAGGGAAAGGTCATTTCAGAGGGAGGAA...GATAAGGGAGACTTCACCTAGAAAGTGCGGTTTAAACTGCAACTTAAAATAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR GCA 90 bp | GGTGAAGTCTCCCTTATCTTCTTAGTGAGAAGTAAACTCACCATCCATCTATCTCTCTGTAATACTTTCTaGTCTCCTCCTATCGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: GEVSLIFLVRSKLTIHLSLCNTF*SPPIAL Trigger: AAGGGCGATAGGAGGAGAGCAGAAAGTATTACAGAG...AGATAGATGGATGGTGAGTTTACTTCTCACTAAGAAGATAAGGGAGACTTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR GCA 90 bp | GCACTTGTTAGCGTCCTTTTGTGGGAGAGATTTGCATCTGTAGAGAATCAGCATTATAGCCGCTTTCCTTaGTTCAAAATCTTCCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: ALVSVLLWERFASVENQHYSRFP*FKIFPF Trigger: AAAAGGGAAGATTTTGAAGCAAGGAAAGCGGCTATA...ATGCTGATTCTCTACAGATGCAAATCTCTCCCACAAAAGGACGCTAACAAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR GCA 90 bp | GCACTTGTTAGCGTCCTTTTGTGGGAGAGATTTGCATCTGTAGAGAATCAGCATCTGCTTATTTTAAGTTaGAGTTTAAACCGCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: ALVSVLLWERFASVENQHLLILS*SLNRTF Trigger: GAAAGTGCGGTTTAAACTGCAACTTAAAATAAGCAG...ATGCTGATTCTCTACAGATGCAAATCTCTCCCACAAAAGGACGCTAACAAGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR TCA 90 bp | TTTCTAGGTGAAGTCTCCCTTATCTTCTTAGTGAGAAGTAAACTCACCATCCATTCCACTGTTGTTTCTTaGAAGCTTGGACAGAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: FLGEVSLIFLVRSKLTIHSTVVS*KLGQSF Trigger: AAAACTCTGTCCAAGCTTTCAAGAAACAACAGTGGA...ATGGATGGTGAGTTTACTTCTCACTAAGAAGATAAGGGAGACTTCACCTAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR TCA 90 bp | TTTCTAGGTGAAGTCTCCCTTATCTTCTTAGTGAGAAGTAAACTCACCATCCATGTAGAGAATCAGCATTaGTGGAAACAGGTTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: FLGEVSLIFLVRSKLTIHVENQH*WKQVFF Trigger: AAAGAAAACCTGTTTCCATCAATGCTGATTCTCTAC...ATGGATGGTGAGTTTACTTCTCACTAAGAAGATAAGGGAGACTTCACCTAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS GCA 90 bp | GTGAGCCGAGATGGTGCCATTGCACTCCAGCACTCAGTTTTCCACTaGGATTGTCTTCTTCTCTCATTGCCAGGGCCGTCAGAAAATTAT | + |
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Preference number: 5 (lower is better) Translates to: VSRDGAIALQHSVFH*DCLLLSLPGPSENY Trigger: ATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGCTGGAGTGCAATGGCACCATCTCGGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000512931.5 ENST00000513920.5 |
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| CDS-3UTR CAA 90 bp | CCACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATTGCCAGGGCCGTCAGATGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: PLSFPLRLSSSLIARAVRCLLLS*PGPSEN Trigger: ATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACA...TCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR CAA 90 bp | TATACCACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATTGCCAGGGCCGTTCCTCCTATCGCCCTTaGTTAGTCCAGTTTCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: YTTQFSTAIVFFSHCQGRSSYRP*LVQFPP Trigger: GGGAGGAAACTGGACTAACAAAGGGCGATAGGAGGA...ACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR CAA 90 bp | CTCTCCTCCTATCGCCCTTTGTTAGTCCAGTTTCCTCCCTCTGAAATGACCTTTGGTCTTTACCAGCACTaGTTAGCGTCCTTTTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LSSYRPLLVQFPPSEMTFGLYQH*LASFCG Trigger: CCCACAAAAGGACGCTAACAAGTGCTGGTAAAGACC...AAAGGTCATTTCAGAGGGAGGAAACTGGACTAACAAAGGGCGATAGGAGGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR CAA 90 bp | GGTGAAGTCTCCCTTATCTTCTTAGTGAGAAGTAAACTCACCATCCATCTATCTCCTCTTCCTGATCCATaGCGGTATCCTCGGCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: GEVSLIFLVRSKLTIHLSPLPDP*RYPRPK Trigger: CTTCGGCCGAGGATACCGCAATGGATCAGGAAGAGG...AGATAGATGGATGGTGAGTTTACTTCTCACTAAGAAGATAAGGGAGACTTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR CAA 90 bp | CCACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATTGCCAGGGCCGTCAGAGTCCACTGTTGTTTCTaGAAAGCTTGGACAGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: PLSFPLRLSSSLIARAVRVHCCF*KAWTEF Trigger: AAACTCTGTCCAAGCTTTCAAGAAACAACAGTGGAC...TCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR CAA 90 bp | CTCTCCTCCTATCGCCCTTTGTTAGTCCAGTTTCCTCCCTCTGAAATGACCTTTCTTGTTAGCGTCCTTTaGTGGGAGAGATTTGCATCT | + |
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Preference number: 5 (lower is better) Translates to: LSSYRPLLVQFPPSEMTFLVSVL*WERFAS Trigger: AGATGCAAATCTCTCCCACAAAAGGACGCTAACAAG...AAAGGTCATTTCAGAGGGAGGAAACTGGACTAACAAAGGGCGATAGGAGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS TCA 90 bp | CGTATGAATTTAGGTGGGGAGGTCACAGACTTTCGGTCCATAGCATaGTTCAAGATGGGTTCCAGTATACTCAGTTTTCCACTGCGATTG | + |
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Preference number: 5 (lower is better) Translates to: RMNLGGEVTDFRSIA*FKMGSSILSFPLRL Trigger: CAATCGCAGTGGAAAACTGAGTATACTGGAACCCATCTTGAATCATGCTATGGACCGAAAGTCTGTGACCTCCCCACCTAAATTCATACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502497.5 |
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| CDS-3UTR CAA 90 bp | CTCTCCTCCTATCGCCCTTTGTTAGTCCAGTTTCCTCCCTCTGAAATGACCTTTTTCATAGGCGTTGAATaGAGTGACAATATTGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LSSYRPLLVQFPPSEMTFFIGVE*SDNIVQ Trigger: TTGGACAATATTGTCACTCAATTCAACGCCTATGAA...AAAGGTCATTTCAGAGGGAGGAAACTGGACTAACAAAGGGCGATAGGAGGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR CAA 90 bp | TTTCTAGGTGAAGTCTCCCTTATCTTCTTAGTGAGAAGTAAACTCACCATCCATGAGAGTCTGACACTTTaGCTGAGCTCTTTCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: FLGEVSLIFLVRSKLTIHESLTL*LSSFSQ Trigger: CTGGCTGAAAGAGCTCAGCAAAAGTGTCAGACTCTC...ATGGATGGTGAGTTTACTTCTCACTAAGAAGATAAGGGAGACTTCACCTAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS-3UTR CAA 90 bp | GGTGAAGTCTCCCTTATCTTCTTAGTGAGAAGTAAACTCACCATCCATCTATCTAGTTTTCCACTGCGATaGTCTTCTTCTCTCATTGCC | + |
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Preference number: 5 (lower is better) Translates to: GEVSLIFLVRSKLTIHLSSFPLR*SSSLIA Trigger: GGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACT...AGATAGATGGATGGTGAGTTTACTTCTCACTAAGAAGATAAGGGAGACTTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS GCA 72 bp | ATTGTCCAAGGCCTTCAGCCCCTCTTCCTGATCCATTaGGGTATCCTCGGCCGAAGCGTCCCTAGCAACGGA | + |
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Preference number: 6 (lower is better) Translates to: IVQGLQPLFLIH*GILGRSVPSNG Trigger: TCCGTTGCTAGGGACGCTTCGGCCGAGGATACCGCAATGGATCAGGAAGAGGGGCTGAAGGCCTTGGACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358105.8 |
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| CDS CAA 90 bp | CCGAGATGGTGCCATTGCACTCCAGCACTCAGTTTTCCACTGCGATaGTCTTCTTCTCTCATTGCCAGGGCCGTCAGAAAATTATCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PRWCHCTPALSFPLR*SSSLIARAVRKLSC Trigger: ACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGCTGGAGTGCAATGGCACCATCTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000512931.5 ENST00000513920.5 |
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| CDS CAA 90 bp | GCACTCCAGCACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAATTATCTTGTAGGTCTTTACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: ALQHSVFHCDCLLLS*PGPSENYLVGLYQH Trigger: GTGCTGGTAAAGACCTACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGCTGGAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000512931.5 ENST00000513920.5 |
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| CDS GCA 72 bp | GATTCAAGATGGGTTCCAGTATACTCAGTTTTCCACTaGGATTGTCTTCTTCTCTCATTGCCAGGGCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: DSRWVPVYSVFH*DCLLLSLPGPS Trigger: TGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTATACTGGAACCCATCTTGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502497.5 |
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| CDS CAA 90 bp | AGATCACGGAACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAATTATCTTGTAGGTCTTTACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RSRNSVFHCDCLLLS*PGPSENYLVGLYQH Trigger: GTGCTGGTAAAGACCTACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTTCCGTGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358105.8 |
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| CDS TCA 72 bp | TTAGGTGGGGAGGTCACAGACTTTCGGTCCATAGCATaGTTCAAGATGGGTTCCAGTATACTCAGTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LGGEVTDFRSIA*FKMGSSILSFP Trigger: TGGAAAACTGAGTATACTGGAACCCATCTTGAATCATGCTATGGACCGAAAGTCTGTGACCTCCCCACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502497.5 |
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| CDS GCA 72 bp | CTGTTGGATGAAATGTACTTACACTCAGTTTTCCACTaGGATTGTCTTCTTCTCTCATTGCCAGGGCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: LLDEMYLHSVFH*DCLLLSLPGPS Trigger: TGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGTAAGTACATTTCATCCAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503883.1 |
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| CDS CAA 72 bp | AAGATGGGTTCCAGTATACTCAGTTTTCCACTGCGATaGTCTTCTTCTCTCATTGCCAGGGCCGTCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: KMGSSILSFPLR*SSSLIARAVRK Trigger: TTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTATACTGGAACCCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502497.5 |
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| CDS CAA 90 bp | GTTCCAGTATACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAATTATCTTGTAGGTCTTTACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VPVYSVFHCDCLLLS*PGPSENYLVGLYQH Trigger: GTGCTGGTAAAGACCTACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTATACTGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502497.5 |
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| CDS CAA 72 bp | GACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAATTATCTTGTAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: DSVFHCDCLLLS*PGPSENYLVGL Trigger: AAGACCTACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508675.1 |
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| CDS CAA 90 bp | ATGTACTTACACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAATTATCTTGTAGGTCTTTACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: MYLHSVFHCDCLLLS*PGPSENYLVGLYQH Trigger: GTGCTGGTAAAGACCTACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTGTAAGTACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503883.1 |
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| CDS CAA 90 bp | GTTGATTTAGACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAATTATCTTGTAGGTCTTTACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VDLDSVFHCDCLLLS*PGPSENYLVGLYQH Trigger: GTGCTGGTAAAGACCTACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTCTAAATCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508675.1 |
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| CDS TCA 72 bp | GAGGCTTTTCTTTGTCCAGATCTAGGAAAGATTAACTaGGAGTCTGACACTTTTGCTGAGCTCTTTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: EAFLCPDLGKIN*ESDTFAELFQP Trigger: TGGCTGAAAGAGCTCAGCAAAAGTGTCAGACTCTCAGTTAATCTTTCCTAGATCTGGACAAAGAAAAGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514249.5 |
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| CDS CAA 72 bp | AACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAATTATCTTGTAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: NSVFHCDCLLLS*PGPSENYLVGL Trigger: AAGACCTACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358105.8 |
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| CDS CAA 72 bp | TACTCAGTTTTCCACTGCGATTGTCTTCTTCTCTCATaGCCAGGGCCGTCAGAAAATTATCTTGTAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: YSVFHCDCLLLS*PGPSENYLVGL Trigger: AAGACCTACAAGATAATTTTCTGACGGCCCTGGCAATGAGAGAAGAAGACAATCGCAGTGGAAAACTGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502497.5 |
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| CDS CAA 90 bp | TGGTACTTAAGTCTTCCTTCTGGAAATGTGGTCAAAAATGACAGCTaGTACGTAGAGTTCTGTCAGGATAGTGATTCTAGTAGAGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: WYLSLPSGNVVKNDS*YVEFCQDSDSSRVV Trigger: GACAACTCTACTAGAATCACTATCCTGACAGAACTCTACGTACAAGCTGTCATTTTTGACCACATTTCCAGAAGGAAGACTTAAGTACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000358105.8 ENST00000508314.1 |
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| CDS TCA 72 bp | TTCTGGATTATCGGCAATCACTTGATAGTTGGGACTTaGATTACTAACAGCAATATCAGCGTCCCAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: FWIIGNHLIVGT*ITNSNISVPVV Trigger: TACAACTGGGACGCTGATATTGCTGTTAGTAATTCAAGTCCCAACTATCAAGTGATTGCCGATAATCCAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000358105.8 ENST00000508675.1 ENST00000621014.1 |
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| CDS CAA 72 bp | AGTCTTCCTTCTGGAAATGTGGTCAAAAATGACAGCTaGTACGTAGAGTTCTGTCAGGATAGTGATTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: SLPSGNVVKNDS*YVEFCQDSDSS Trigger: ACTAGAATCACTATCCTGACAGAACTCTACGTACAAGCTGTCATTTTTGACCACATTTCCAGAAGGAAGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000358105.8 ENST00000508314.1 ENST00000508675.1 ENST00000621014.1 |
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