RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP157 (Homo sapiens)

Ensembl gene IDs: ENSG00000160401

Ensembl transcript IDs: ENST00000373293.5, ENST00000373295.7, ENST00000461104.2, ENST00000464092.1, ENST00000496009.5, ENST00000614677.1

Found 523 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGTGGGCATGGCGGTGCTGGGGCAGCTGGCGCGGCGGCTGGGTGTaGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCG +
Preference number: 1 (lower is better)
Translates to: AWAWRCWGSWRGGWV*RRVGRATGTVPPTS
Trigger: CGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCGCCAGCTGCCCCAGCACCGCCATGCCCACGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp TGCCCGGCACGCGACACAGCGTGGGCATGGCGGTGCTGGGGCAGCTaGCGCGGCGGCTGGGTGTGGCGGAGAGTTGGACGCGCGACCGGC +
Preference number: 1 (lower is better)
Translates to: CPARDTAWAWRCWGS*RGGWVWRRVGRATG
Trigger: GCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCGCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 90 bp GCGGCGGCTGGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTaGCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAACTGGT +
Preference number: 1 (lower is better)
Translates to: AAAGCGGELDARPAL*RRPRPGPAGGCPTG
Trigger: ACCAGTTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp CGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTaGCCCCGCTGGGGGATGCCCAACTGGTCCTGCTCCGGCCACGGC +
Preference number: 1 (lower is better)
Translates to: RRVGRATGTVPPTSP*PRWGMPNWSCSGHG
Trigger: GCCGTGGCCGGAGCAGGACCAGTTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp GACACAGCGTGGGCATGGCGGTGCTGGGGCAGCTGGCGCGGCGGCTaGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCG +
Preference number: 1 (lower is better)
Translates to: DTAWAWRCWGSWRGG*VWRRVGRATGTVPP
Trigger: CGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCGCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp TGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTaGGCATGGCGGTGCTGGGGCAGCTGGCGCGGCGGCTGGGTGTGG +
Preference number: 1 (lower is better)
Translates to: WLAWGIPDCPARDTA*AWRCWGSWRGGWVW
Trigger: CCACACCCAGCCGCCGCGCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp ATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCATGGCGGTGCTaGGGCAGCTGGCGCGGCGGCTGGGTGTGGCGGAGAGTTGGACGC +
Preference number: 1 (lower is better)
Translates to: IPDCPARDTAWAWRC*GSWRGGWVWRRVGR
Trigger: GCGTCCAACTCTCCGCCACACCCAGCCGCCGCGCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 90 bp GGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCATGGCGGTaGTGGGGCAGCTGGCGCGGCGGCTGGGTGTGGCGGAGAGTTGGA +
Preference number: 1 (lower is better)
Translates to: GIPDCPARDTAWAWR*WGSWRGGWVWRRVG
Trigger: TCCAACTCTCCGCCACACCCAGCCGCCGCGCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 90 bp CGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATaGCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAA +
Preference number: 1 (lower is better)
Translates to: RPALCRRPRPGPAGG*PTGPAPATAAYERQ
Trigger: TTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp CCTGGGCCTCTCTGGCTCTCCCACAGGCAATGCCAAGGCTGCGGGTaGGTATCGGGCGCCCGGCGCACCCTGAGGCGGTTCAGGCCCATG +
Preference number: 1 (lower is better)
Translates to: PGPLWLSHRQCQGCG*VSGARRTLRRFRPM
Trigger: CATGGGCCTGAACCGCCTCAGGGTGCGCCGGGCGCCCGATACCCACCCGCAGCCTTGGCATTGCCTGTGGGAGAGCCAGAGAGGCCCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 90 bp GTGAGATCGGGGGTGGCGAGAGTTGTTGGGCCTCAGTTTCCCTGGTaGCGCCCGCAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGC +
Preference number: 1 (lower is better)
Translates to: VRSGVARVVGPQFPW*RPQVAGLGNPGLPG
Trigger: GCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTCGCCACCCCCGATCTCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp GGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTaGGCCTCTCTGGCTCTCCCACAGGCAATGCCAAGGCTGCGGGTG +
Preference number: 1 (lower is better)
Translates to: GSGGPGVPQHLAKAS*ASLALPQAMPRLRV
Trigger: CACCCGCAGCCTTGGCATTGCCTGTGGGAGAGCCAGAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp TTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTaGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCATGG +
Preference number: 1 (lower is better)
Translates to: LLGLSFPGAARRWLA*GIPDCPARDTAWAW
Trigger: CCATGCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTaGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGG +
Preference number: 1 (lower is better)
Translates to: ESCWASVSLVPPAGG*PGESRTARHATQRG
Trigger: CCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp TTGGGGCCCACGGGACGCTGTGAGATCGGGGGTGGCGAGAGTTGTTaGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: LGPTGRCEIGGGESC*ASVSLVPPAGGWPG
Trigger: CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTCGCCACCCCCGATCTCACAGCGTCCCGTGGGCCCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 90 bp AGCGTCCCACACAAGTCCCGAAGGGACACTGTGACGCCGCGCTACTaGAGGCGCCTGGGTTCCCGGACTCGGCCACCGCCTCGCCGCTTC +
Preference number: 1 (lower is better)
Translates to: SVPHKSRRDTVTPRY*RRLGSRTRPPPRRF
Trigger: GAAGCGGCGAGGCGGTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTGTGTGGGACGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 90 bp AAGCTTCCTGGGCCTCTCTGGCTCTCCCACAGGCAATGCCAAGGCTaGGGGTGGGTATCGGGCGCCCGGCGCACCCTGAGGCGGTTCAGG +
Preference number: 1 (lower is better)
Translates to: KLPGPLWLSHRQCQG*GWVSGARRTLRRFR
Trigger: CCTGAACCGCCTCAGGGTGCGCCGGGCGCCCGATACCCACCCGCAGCCTTGGCATTGCCTGTGGGAGAGCCAGAGAGGCCCAGGAAGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp GGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCTaGCTCTCCCACAGGCAATGCCAAGGCTGCGGGTGGGTATCGGGC +
Preference number: 1 (lower is better)
Translates to: GQGSPSTSPKLPGPL*LSHRQCQGCGWVSG
Trigger: GCCCGATACCCACCCGCAGCCTTGGCATTGCCTGTGGGAGAGCCAGAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 90 bp CAGCTGGATGCTGGGCCGGCTCTCCTTGGGTGGGCCATGGGACTGTaGCTCCTGGTGGGGACACGCAGCCTTCTGAGGTCTCGTGGCCAC +
Preference number: 1 (lower is better)
Translates to: QLDAGPALLGWAMGL*LLVGTRSLLRSRGH
Trigger: GTGGCCACGAGACCTCAGAAGGCTGCGTGTCCCCACCAGGAGTCACAGTCCCATGGCCCACCCAAGGAGAGCCGGCCCAGCATCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR TCA 90 bp GGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGTaGTGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGCAGCT +
Preference number: 1 (lower is better)
Translates to: GPGEVPGLDPPAGRG*CQRAAAAETQSWAA
Trigger: AGCTGCCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR GCA 90 bp CCAGGGGCCCTCACTGGGGCCGTGACACTAGTGGCCATGGCTGCCTaGCTGACTGTAGTGCCCACCAACCCAGCCACTGCCACAGAGCTG +
Preference number: 1 (lower is better)
Translates to: PGALTGAVTLVAMAA*LTVVPTNPATATEL
Trigger: CAGCTCTGTGGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATGGCCACTAGTGTCACGGCCCCAGTGAGGGCCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp CGTAGCCCGGCCCGGATTGGACGTTGGCGGTGGACGCCAAACAGTTaGCAACACGATTGGCTGCTGCGGGGTGATGACGTCAGGGGGCGG +
Preference number: 1 (lower is better)
Translates to: RSPARIGRWRWTPNS*QHDWLLRGDDVRGR
Trigger: CCGCCCCCTGACGTCATCACCCCGCAGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 90 bp AAGCAAGAGCTCCGAGCGTCCCACACAAGTCCCGAAGGGACACTGTaGCGCCGCGCTACTGAAGGCGCCTGGGTTCCCGGACTCGGCCAC +
Preference number: 1 (lower is better)
Translates to: KQELRASHTSPEGTL*RRATEGAWVPGLGH
Trigger: GTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTGTGTGGGACGCTCGGAGCTCTTGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 90 bp GAAGCCAGGGGCCCTCACTGGGGCCGTGACACTAGTGGCCATGGCTaGCTGCCTGACTGTAGTGCCCACCAACCCAGCCACTGCCACAGA +
Preference number: 1 (lower is better)
Translates to: EARGPHWGRDTSGHG*LPDCSAHQPSHCHR
Trigger: TCTGTGGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATGGCCACTAGTGTCACGGCCCCAGTGAGGGCCCCTGGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp CCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCGTTaGGGCCCACGGGACGCTGTGAGATCGGGGGTGGCGAGAGTTGTT +
Preference number: 1 (lower is better)
Translates to: PFPTAALLCVSAPLR*GPRDAVRSGVARVV
Trigger: AACAACTCTCGCCACCCCCGATCTCACAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp CCCTCAGAAGCATGGCGGCCACGTAGCCCGGCCCGGATTGGACGTTaGCGGTGGACGCCAAACAGTTGGCAACACGATTGGCTGCTGCGG +
Preference number: 1 (lower is better)
Translates to: PSEAWRPRSPARIGR*RWTPNSWQHDWLLR
Trigger: CCGCAGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCGCCATGCTTCTGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 90 bp TGCTCTGCGTTTCCGCTCCTCTGCGTTGGGGCCCACGGGACGCTGTaGGATCGGGGGTGGCGAGAGTTGTTGGGCCTCAGTTTCCCTGGT +
Preference number: 1 (lower is better)
Translates to: CSAFPLLCVGAHGTL*DRGWRELLGLSFPG
Trigger: ACCAGGGAAACTGAGGCCCAACAACTCTCGCCACCCCCGATCTCACAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGAAACGCAGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp GAAGCATGGCGGCCACGTAGCCCGGCCCGGATTGGACGTTGGCGGTaGACGCCAAACAGTTGGCAACACGATTGGCTGCTGCGGGGTGAT +
Preference number: 1 (lower is better)
Translates to: EAWRPRSPARIGRWR*TPNSWQHDWLLRGD
Trigger: ATCACCCCGCAGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCGCCATGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 90 bp TCTGTTGCTGGATCGAGCCACCGACCTGATCTTGGACCACATCCGTaGGCGAAGCCAGGGGCCCTCACTGGGGCCGTGACACTAGTGGCC +
Preference number: 1 (lower is better)
Translates to: SVAGSSHRPDLGPHP*AKPGALTGAVTLVA
Trigger: GGCCACTAGTGTCACGGCCCCAGTGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGCTCGATCCAGCAACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 90 bp CTGAGCAGGAGCTGCTGCCTCTGTTGCTGGATCGAGCCACCGACCTaGTCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCACTGG +
Preference number: 1 (lower is better)
Translates to: LSRSCCLCCWIEPPT*SWTTSVSEARGPHW
Trigger: CCAGTGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGCTCGATCCAGCAACAGAGGCAGCAGCTCCTGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 90 bp GGTGGGCCATGGGACTGTGACTCCTGGTGGGGACACGCAGCCTTCTaGGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGC +
Preference number: 1 (lower is better)
Translates to: GGPWDCDSWWGHAAF*GLVATVELSMTSSC
Trigger: GCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCTCAGAAGGCTGCGTGTCCCCACCAGGAGTCACAGTCCCATGGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR TCA 90 bp CTCAGGGCTGCTGTGTGCCCGGAAGGTCCCCACACGGGTGATATATaGCAGCAGCCTGAGGTCCTGGGGGTTGGGTGGGATGTGGACCTG +
Preference number: 1 (lower is better)
Translates to: LRAAVCPEGPHTGDI*QQPEVLGVGWDVDL
Trigger: CAGGTCCACATCCCACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTTCCGGGCACACAGCAGCCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR GCA 90 bp CGGGCTCCAAACTTCTTGAAGCTCCGTTCCTGCACTAGGGCGCCCTaGCTGCCCAGCCTTCTGGAGTTCTCAGGGGTCGGGTTTCTGGGC +
Preference number: 1 (lower is better)
Translates to: RAPNFLKLRSCTRAP*LPSLLEFSGVGFLG
Trigger: GCCCAGAAACCCGACCCCTGAGAACTCCAGAAGGCTGGGCAGGCAGGGCGCCCTAGTGCAGGAACGGAGCTTCAAGAAGTTTGGAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 90 bp TTGGACGTTGGCGGTGGACGCCAAACAGTTGGCAACACGATTGGCTaGTGCGGGGTGATGACGTCAGGGGGCGGTGTCGGAGTGAATGGG +
Preference number: 1 (lower is better)
Translates to: LDVGGGRQTVGNTIG*CGVMTSGGGVGVNG
Trigger: CCCATTCACTCCGACACCGCCCCCTGACGTCATCACCCCGCAGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCACCGCCAACGTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp CGGATTGGACGTTGGCGGTGGACGCCAAACAGTTGGCAACACGATTaGCTGCTGCGGGGTGATGACGTCAGGGGGCGGTGTCGGAGTGAA +
Preference number: 1 (lower is better)
Translates to: RIGRWRWTPNSWQHD*LLRGDDVRGRCRSE
Trigger: TTCACTCCGACACCGCCCCCTGACGTCATCACCCCGCAGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCACCGCCAACGTCCAATCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 90 bp CGGAAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTaGGGGTTGGGTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGA +
Preference number: 1 (lower is better)
Translates to: RKVPTRVIYDSSLRS*GLGGMWTWRGTRPR
Trigger: TCTAGGCCTGGTACCTCGCCAGGTCCACATCCCACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR GCA 90 bp GAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTTCCTaGACTAGGGCGCCCTGCCTGCCCAGCCTTCTGGAGTTCTCAGGG +
Preference number: 1 (lower is better)
Translates to: EFSARRAPNFLKLRS*TRAPCLPSLLEFSG
Trigger: CCCTGAGAACTCCAGAAGGCTGGGCAGGCAGGGCGCCCTAGTGCAGGAACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 90 bp GGCCATGGCTGCCTGCCTGACTGTAGTGCCCACCAACCCAGCCACTaGCACAGAGCTGCCACGCCAGCCTTGGTATCTACTTTTTATACA +
Preference number: 1 (lower is better)
Translates to: GHGCLPDCSAHQPSH*HRAATPALVSTFYT
Trigger: TGTATAAAAAGTAGATACCAAGGCTGGCGTGGCAGCTCTGTGGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 90 bp GCCACAATGGAGTCCGTTCCTGCATTAGCTGCCTCAACTCCAATGTaGGTCTACCCTTTTGTTGTGCAACTGGGTCGGGTGGGCCAGGGG +
Preference number: 1 (lower is better)
Translates to: ATMESVPALAASTPM*VYPFVVQLGRVGQG
Trigger: CCCCTGGCCCACCCGACCCAGTTGCACAACAAAAGGGTAGACTCACATTGGAGTTGAGGCAGCTAATGCAGGAACGGACTCCATTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR TCA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGGCGCCCGGCGCACCCTaGGGCGGTTCAGGCCCATGT +
Preference number: 2 (lower is better)
Translates to: VARAGELRAPGVGGRAKGAPGAP*GGSGPC
Trigger: ACATGGGCCTGAACCGCCTCAGGGTGCGCCGGGCGC...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCAGCTGGCGCGGCGGCTaGGTGTGGCGGAGAGTTGGA +
Preference number: 2 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGSWRGG*VWRRVG
Trigger: TCCAACTCTCCGCCACACCCAGCCGCCGCGCCAGCT...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp TGGCTCTCCCACAGGCAATGCCAAGGCTGCGGGTGGGTATCGGGCGCCCGGCGCGCCAGGGGCCCTCACTaGGGCCGTGACACTAGTGGC +
Preference number: 2 (lower is better)
Translates to: WLSHRQCQGCGWVSGARRARGPH*GRDTSG
Trigger: GCCACTAGTGTCACGGCCCCAGTGAGGGCCCCTGGC...GCGCCGGGCGCCCGATACCCACCCGCAGCCTTGGCATTGCCTGTGGGAGAGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGGTGCCAAGGCTGCGGGTaGGTATCGGGCGCCCGGCGC +
Preference number: 2 (lower is better)
Translates to: ESCWASVSLVPPAGGWPGCQGCG*VSGARR
Trigger: GCGCCGGGCGCCCGATACCCACCCGCAGCCTTGGCA...CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp GGAGTGAATGGGGGCAGCATGAGGCCGGGCGGCTTTTTGGGCGCCGGACAGCGGCGCAGGTGGCTGGCCTaGGGAATCCCGGACTGCCCG +
Preference number: 2 (lower is better)
Translates to: GVNGGSMRPGGFLGAGQRRRWLA*GIPDCP
Trigger: CGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTGCG...CCGCTGTCCGGCGCCCAAAAAGCCGCCCGGCCTCATGCTGCCCCCATTCACTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR TCA 90 bp CGCGGCGGCTGGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGCCCTCCCATATCCCTTaGAGGGGCCACAATGGAGTC +
Preference number: 2 (lower is better)
Translates to: RGGWVWRRVGRATGTVPPPSHIP*RGHNGV
Trigger: GACTCCATTGTGGCCCCTTCAAGGGATATGGGAGGG...CGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR TCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGGCGTGGCCCGGGCTGGTaGGTTGAGAGCGCCAGGGGT +
Preference number: 2 (lower is better)
Translates to: ESCWASVSLVPPAGGWPGRGPGW*VESARG
Trigger: ACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCACG...CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR GCA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGACTAGTGGCCATGGCTaGCTGCCTGACTGTAGTGCC +
Preference number: 2 (lower is better)
Translates to: VARAGELRAPGVGGRAKGTSGHG*LPDCSA
Trigger: GGCACTACAGTCAGGCAGGCAGCCATGGCCACTAGT...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR GCA 90 bp TGGCTCTCCCACAGGCAATGCCAAGGCTGCGGGTGGGTATCGGGCGCCCGGCGCCGGTTCAGGCCCATGTaGTGGGCTGCTTCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: WLSHRQCQGCGWVSGARRRFRPM*WAASPL
Trigger: CAGGGGAGAAGCAGCCCAGCACATGGGCCTGAACCG...GCGCCGGGCGCCCGATACCCACCCGCAGCCTTGGCATTGCCTGTGGGAGAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp CAAGTCCCGAAGGGACACTGTGACGCCGCGCTACTGAAGGCGCCTGGGTTCCCGCGCCCCTCAGAAGCATaGCGGCCACGTAGCCCGGCC +
Preference number: 2 (lower is better)
Translates to: QVPKGHCDAALLKAPGFPRPSEA*RPRSPA
Trigger: GGCCGGGCTACGTGGCCGCCATGCTTCTGAGGGGCG...CGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR TCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGGGGGGGCAGTGCCAGGTaGGGTCCTGAGATGGTCAGG +
Preference number: 2 (lower is better)
Translates to: ESCWASVSLVPPAGGWPGGGSAR*GPEMVR
Trigger: CCTGACCATCTCAGGACCTCACCTGGCACTGCCCCC...CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
68% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR TCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGGGGGGAGCACTGGCTGTaGCAGATCCGCGGGTTCACC +
Preference number: 2 (lower is better)
Translates to: ESCWASVSLVPPAGGWPGGEHWL*QIRGFT
Trigger: GGTGAACCCGCGGATCTGTCACAGCCAGTGCTCCCC...CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCCTTTTGTTGTGCAACTaGGTCGGGTGGGCCAGGGGT +
Preference number: 2 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGLLLCN*VGWARG
Trigger: ACCCCTGGCCCACCCGACCCAGTTGCACAACAAAAG...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CAA 90 bp CAGGAGCTGCTGCCTCTGTTGCTGGATCGAGCCACCGACCTGATCTaGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCACTGGGGCCG +
Preference number: 2 (lower is better)
Translates to: QELLPLLLDRATDLI*DHIRERSQGPSLGP
Trigger: CGGCCCCAGTGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGCTCGATCCAGCAACAGAGGCAGCAGCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CAA 90 bp GGCGGTGTCGGAGTGAATGGGGGCAGCATGAGGCCGGGCGGCTTTTaGGGCGCCGGACAGCGGCTGAGTAGAGCCATGAGCCGATGTGTT +
Preference number: 2 (lower is better)
Translates to: GGVGVNGGSMRPGGF*GAGQRLSRAMSRCV
Trigger: AACACATCGGCTCATGGCTCTACTCAGCCGCTGTCCGGCGCCCAAAAAGCCGCCCGGCCTCATGCTGCCCCCATTCACTCCGACACCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CAA 90 bp GCTTCCGCCCCTCAGAAGCATGGCGGCCACGTAGCCCGGCCCGGATaGGACGTTGGCGGTGGACGCCAAACAGTTGGCAACACGATTGGC +
Preference number: 2 (lower is better)
Translates to: ASAPQKHGGHVARPG*DVGGGRQTVGNTIG
Trigger: GCCAATCGTGTTGCCAACTGTTTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCGCCATGCTTCTGAGGGGCGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR GCA 90 bp CTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCGTTAGGCAATGCCAAGGCTaGGGGTGGGTATCGGGCGCC +
Preference number: 2 (lower is better)
Translates to: LRAPSPLQRCSAFPLLCVRQCQG*GWVSGA
Trigger: GGCGCCCGATACCCACCCGCAGCCTTGGCATTGCCT...AACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGGCTCGCCAAAGCTTCCTaGGCCTCTCTGGCTCTCCCA +
Preference number: 2 (lower is better)
Translates to: ESCWASVSLVPPAGGWPGLAKAS*ASLALP
Trigger: TGGGAGAGCCAGAGAGGCCCAGGAAGCTTTGGCGAG...CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCAGTCTCCACAGGAAATaGGCTGCTCTGACCCAGCCG +
Preference number: 2 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSSLHRK*AALTQP
Trigger: CGGCTGGGTCAGAGCAGCCCATTTCCTGTGGAGACT...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp CAAGTCCCGAAGGGACACTGTGACGCCGCGCTACTGAAGGCGCCTGGGTTCCCGGCCTCCCAGTTGGGGTaGAGTAGGGCTGCTGACCCA +
Preference number: 2 (lower is better)
Translates to: QVPKGHCDAALLKAPGFPASQLG*SRAADP
Trigger: TGGGTCAGCAGCCCTACTCCACCCCAACTGGGAGGC...CGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGGTTCAGGCCTCCCAGTTaGGGTGGAGTAGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: ESCWASVSLVPPAGGWPGFRPPS*GGVGLL
Trigger: CAGCAGCCCTACTCCACCCCAACTGGGAGGCCTGAA...CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR GCA 90 bp CTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCGTTTGGGAGTCGGGACAGTaGCTCTCTGGGCAGATGGGC +
Preference number: 2 (lower is better)
Translates to: LRAPSPLQRCSAFPLLCVWESGQ*LSGQMG
Trigger: GCCCATCTGCCCAGAGAGGCACTGTCCCGACTCCCA...AACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR TCA 90 bp CAAGTCCCGAAGGGACACTGTGACGCCGCGCTACTGAAGGCGCCTGGGTTCCCGATCGAGCCACCGACCTaGTCTTGGACCACATCCGTG +
Preference number: 2 (lower is better)
Translates to: QVPKGHCDAALLKAPGFPIEPPT*SWTTSV
Trigger: CACGGATGTGGTCCAAGATCAGGTCGGTGGCTCGAT...CGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR TCA 90 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTGCCTCAACTCCAATGTaGGTCTACCCTTTTGTTGTG +
Preference number: 2 (lower is better)
Translates to: GCGGELDARPALCRRPRPASTPM*VYPFVV
Trigger: CACAACAAAAGGGTAGACTCACATTGGAGTTGAGGC...AGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGGGGGGTGACTGTGACTaGACCAGTCCATTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGGGDCD*TSPFLE
Trigger: CTCCAGAAATGGACTGGTCCAGTCACAGTCACCCCC...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
62% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR CCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTTGGGCAGCTGGATGCTaGGCCGGCTCTCCTTGGGTG +
Preference number: 2 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGWAAGC*AGSPWV
Trigger: CACCCAAGGAGAGCCGGCCCAGCATCCAGCTGCCCA...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR CCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTGCAGAGACCCAGTCCTaGGCAGCTGGATGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGAETQS*AAGCWA
Trigger: GGCCCAGCATCCAGCTGCCCAGGACTGGGTCTCTGC...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR TCA 90 bp TGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAAGTCTACTTGGACCACATCCGTaGGCGAAGCCAGGGGCCCTC +
Preference number: 2 (lower is better)
Translates to: CRFPVLSGAVWADCRGSLLGPHP*AKPGAL
Trigger: GAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAG...TAGACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR TCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTGGACACGCAGCCTTCTaGGGTCTCGTGGCCACAGTG +
Preference number: 2 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGGHAAF*GLVATV
Trigger: CACTGTGGCCACGAGACCTCAGAAGGCTGCGTGTCC...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR GCA 90 bp AGTAACCAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCACCAACCCAGCCACTaGCACAGAGCTGCCACGCCA +
Preference number: 2 (lower is better)
Translates to: SNQGCRFPVLSGAVWADCHQPSH*HRAATP
Trigger: TGGCGTGGCAGCTCTGTGGCAGTGGCTGGGTTGGTG...GCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTGGTTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp ACCGACCTGATCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCACTGGGGGGGGGTGACTGTGACTaGACCAGTCCATTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: TDLILDHIRERSQGPSLGGGDCD*TSPFLE
Trigger: CTCCAGAAATGGACTGGTCCAGTCACAGTCACCCCC...CCCCAGTGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGT
61% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp CCTTCTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCTAAGCGGAGCTGTTTaGGCTGACTGCCGAGGAAGT +
Preference number: 2 (lower is better)
Translates to: PSSRPFPTAALLCVSAPLLSGAV*ADCRGS
Trigger: ACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAG...CAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp CAAGTCCCGAAGGGACACTGTGACGCCGCGCTACTGAAGGCGCCTGGGTTCCCGTGGACGCCAAACAGTTaGCAACACGATTGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: QVPKGHCDAALLKAPGFPWTPNS*QHDWLL
Trigger: CAGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCA...CGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp GGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCCTGCCACGCCAGCCTTaGTATCTACTTTTTATACAA +
Preference number: 2 (lower is better)
Translates to: GRVGQGSPSTSPKLPGPLLPRQP*YLLFIQ
Trigger: TTGTATAAAAAGTAGATACCAAGGCTGGCGTGGCAG...GAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTCGCGGCGGCTGGGTGTaGCGGAGAGTTGGACGCGCG +
Preference number: 2 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRRGGWV*RRVGRA
Trigger: CGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCG...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR TCA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTGGCCACGGCGGCTTATaGACGCCAACGGGCGCAGCG +
Preference number: 2 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRGHGGL*TPTGAA
Trigger: CGCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCC...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR GCA 90 bp CTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCGTTAGGAAGTCTACCTGGTaGATGATGAGCTGGACAAGC +
Preference number: 2 (lower is better)
Translates to: LRAPSPLQRCSAFPLLCVRKSTW*MMSWTS
Trigger: GCTTGTCCAGCTCATCATGCACCAGGTAGACTTCCT...AACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR GCA 90 bp CCTTCTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGTTGAGCTCCAGTTGCTaGATGGCTTTGGGTACTTCG +
Preference number: 2 (lower is better)
Translates to: PSSRPFPTAALLCVSAPLLSSSC*MALGTS
Trigger: CGAAGTACCCAAAGCCATGCAGCAACTGGAGCTCAA...CAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp CGAGCCACCGACCTGATCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCAGGACCAGTCCATTTCTaGAGTAGGTTCTTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: RATDLILDHIRERSQGPSGPVHF*SRFFSL
Trigger: CAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCC...TGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR TCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTTGGGCCATGGGACTGTaGCTCCTGGTGGGGACACGC +
Preference number: 2 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPWAMGL*LLVGTR
Trigger: GCGTGTCCCCACCAGGAGTCACAGTCCCATGGCCCA...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR CCA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTGGTGTGGCGGAGAGTTaGACGCGCGACCGGCACTGT +
Preference number: 2 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRGVAES*TRDRHC
Trigger: ACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACC...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR TCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCCCGGCTGGTAGGGGGTaGTGTCAGAGAGCTGCGGCA +
Preference number: 2 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSPAGRG*CQRAAA
Trigger: TGCCGCAGCTCTCTGACATCACCCCCTACCAGCCGG...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR CCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTTGGGACTGTGACTCCTaGTGGGGACACGCAGCCTTC +
Preference number: 2 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPWDCDS*WGHAAF
Trigger: GAAGGCTGCGTGTCCCCACCAGGAGTCACAGTCCCA...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR CCA 90 bp CTTTTTATACAAATCTCCTCTAGACTGTTCCAGGCTGCCTGCGGATTAAAGTGGCCAGTCCTGGGCAGCTaGATGCTGGGCCGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: LFIQISSRLFQAACGLKWPVLGS*MLGRLS
Trigger: GGAGAGCCGGCCCAGCATCCAGCTGCCCAGGACTGG...CCACTTTAATCCGCAGGCAGCCTGGAACAGTCTAGAGGAGATTTGTATAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR GCA 90 bp AATTGCTGCTCTGTTTTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTCCCCACTGCAGCGTTaGTCTGCGTTTCCGCTCCTC +
Preference number: 2 (lower is better)
Translates to: NCCSVFLTGEFSARRAPNSPLQR*SAFPLL
Trigger: GAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGA...GTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAAAACAGAGCAGCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR GCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCCACGCATCTCAGGGCTaGTGTGTGCCCGGAAGGTCC +
Preference number: 2 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSHASQG*CVPGRS
Trigger: GGACCTTCCGGGCACACAGCAGCCCTGAGATGCGTG...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR CCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCAGCAGCCTGAGGTCCTaGGGGTTGGGTGGGATGTGG +
Preference number: 2 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSSSLRS*GLGGMW
Trigger: CCACATCCCACCCAACCCCCAGGACCTCAGGCTGCT...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR TCA 90 bp AATTGCTGCTCTGTTTTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTGCCAGGTGAGGTCCTaGGATGGTCAGGGTTGGGAT +
Preference number: 2 (lower is better)
Translates to: NCCSVFLTGEFSARRAPNCQVRS*DGQGWD
Trigger: ATCCCAACCCTGACCATCTCAGGACCTCACCTGGCA...GTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAAAACAGAGCAGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp AATTGCTGCTCTGTTTTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTGGTGCATGATGAGCTaGACAAGCCCCTGGGGAGAC +
Preference number: 2 (lower is better)
Translates to: NCCSVFLTGEFSARRAPNWCMMS*TSPWGD
Trigger: GTCTCCCCAGGGGCTTGTCCAGCTCATCATGCACCA...GTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAAAACAGAGCAGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCTCCTTGGGTGGGCCATaGGACTGTGACTCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSSLGGP*DCDSWW
Trigger: CCACCAGGAGTCACAGTCCCATGGCCCACCCAAGGA...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR GCA 90 bp TTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTTCCCGTTCCTGCATTAGCTaGCTCAACTCCAATGTGAGT +
Preference number: 2 (lower is better)
Translates to: LTGEFSARRAPNFLKLRSRSCIS*LNSNVS
Trigger: ACTCACATTGGAGTTGAGGCAGCTAATGCAGGAACG...GGAACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR GCA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTAATGGAGTCCGTTCCTaGATTAGCTGCCTCAACTCC +
Preference number: 2 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRNGVRS*ISCLNS
Trigger: GGAGTTGAGGCAGCTAATGCAGGAACGGACTCCATT...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR GCA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTCTGTTGAGCTCCAGTTaGTGCATGGCTTTGGGTACT +
Preference number: 2 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRLLSSS*CMALGT
Trigger: AGTACCCAAAGCCATGCAGCAACTGGAGCTCAACAG...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR GCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTATGACCAGCAGTTGCTaGAGCATCTCCTTGTGCCAT +
Preference number: 2 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPMTSSC*SISLCH
Trigger: ATGGCACAAGGAGATGCTGCAGCAACTGCTGGTCAT...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR CCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCGGACCAGTCCATTTCTaGAGTAGGTTCTTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSGPVHF*SRFFSL
Trigger: CAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCC...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR GCA 72 bp GACTGCCCGGCACGCGACACAGCGTGGGCATGGCGGTaGTGGGGCAGCTGGCGCGGCGGCTGGGTGTGGCGG +
Preference number: 3 (lower is better)
Translates to: DCPARDTAWAWR*WGSWRGGWVWR
Trigger: CCGCCACACCCAGCCGCCGCGCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCAGTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp GGGCAGCTGGCGCGGCGGCTGGGTGTGGCGGAGAGTTaGACGCGCGACCGGCACTGTGCCGCCGACCTCGCC +
Preference number: 3 (lower is better)
Translates to: GQLARRLGVAES*TRDRHCAADLA
Trigger: GGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCGCCAGCTGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 72 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTaGCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGC +
Preference number: 3 (lower is better)
Translates to: GCGGELDARPAL*RRPRPGPAGGC
Trigger: GCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp ACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTaGGGGATGCCCAACTGGTCCTGCTCCGGCCACGGC +
Preference number: 3 (lower is better)
Translates to: TGTVPPTSPWPR*GMPNWSCSGHG
Trigger: GCCGTGGCCGGAGCAGGACCAGTTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp GGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTaGCCCCGCTGGGGGATGCCCAACTGGTCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: GRATGTVPPTSP*PRWGMPNWSCS
Trigger: GGAGCAGGACCAGTTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp TGCCCGGCACGCGACACAGCGTGGGCATGGCGGTGCTaGGGCAGCTGGCGCGGCGGCTGGGTGTGGCGGAGA +
Preference number: 3 (lower is better)
Translates to: CPARDTAWAWRC*GSWRGGWVWRR
Trigger: TCTCCGCCACACCCAGCCGCCGCGCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp ATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCATaGCGGTGCTGGGGCAGCTGGCGCGGCGGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: IPDCPARDTAWA*RCWGSWRGGWV
Trigger: CACCCAGCCGCCGCGCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp CGCGACACAGCGTGGGCATGGCGGTGCTGGGGCAGCTaGCGCGGCGGCTGGGTGTGGCGGAGAGTTGGACGC +
Preference number: 3 (lower is better)
Translates to: RDTAWAWRCWGS*RGGWVWRRVGR
Trigger: GCGTCCAACTCTCCGCCACACCCAGCCGCCGCGCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 72 bp CTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATaGCCAACTGGTCCTGCTCCGGCCACGGCGGCTTAT +
Preference number: 3 (lower is better)
Translates to: LCRRPRPGPAGG*PTGPAPATAAY
Trigger: ATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CAA 90 bp ACTGAAGGCGCCTGGGTTCCCGGACTCGGCCACCGCCTCGCCGCTTCCGCCCCTGTAGCCCGGCCCGGATaGGACGTTGGCGGTGGACGC +
Preference number: 3 (lower is better)
Translates to: TEGAWVPGLGHRLAASAPVARPG*DVGGGR
Trigger: GCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTAC...AGGGGCGGAAGCGGCGAGGCGGTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 72 bp GGCGCCCGGCGCACCCTGAGGCGGTTCAGGCCCATGTaGTGGGCTGCTTCTCCCCTGCTGAGCAGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: GARRTLRRFRPM*WAASPLLSRSC
Trigger: GCAGCTCCTGCTCAGCAGGGGAGAAGCAGCCCAGCACATGGGCCTGAACCGCCTCAGGGTGCGCCGGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp CTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTaGGGAATCCCGGACTGCCCGGCACGCGACACAGCG +
Preference number: 3 (lower is better)
Translates to: LSFPGAARRWLA*GIPDCPARDTA
Trigger: CGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp TGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTaGCCTGGGGAATCCCGGACTGCCCGGCACGCGACA +
Preference number: 3 (lower is better)
Translates to: WASVSLVPPAGG*PGESRTARHAT
Trigger: TGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CAA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGGCCACCGACCTGATCTaGGACCACATCCGTGAGCGA +
Preference number: 3 (lower is better)
Translates to: VARAGELRAPGVGGRAKGATDLI*DHIRER
Trigger: TCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGC...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CAA 90 bp GGAGTGAATGGGGGCAGCATGAGGCCGGGCGGCTTTTTGGGCGCCGGACAGCGGGGGTGTGGCGGAGAGTaGGACGCGCGACCGGCACTG +
Preference number: 3 (lower is better)
Translates to: GVNGGSMRPGGFLGAGQRGCGGE*DARPAL
Trigger: CAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC...CCGCTGTCCGGCGCCCAAAAAGCCGCCCGGCCTCATGCTGCCCCCATTCACTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 72 bp AAGGCTGCGGGTGGGTATCGGGCGCCCGGCGCACCCTaGGGCGGTTCAGGCCCATGTGCTGGGCTGCTTCTC +
Preference number: 3 (lower is better)
Translates to: KAAGGYRAPGAP*GGSGPCAGLLL
Trigger: GAGAAGCAGCCCAGCACATGGGCCTGAACCGCCTCAGGGTGCGCCGGGCGCCCGATACCCACCCGCAGCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 72 bp ATGCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATaGACGCCAACGGGCGCAGCGTGGCCCGGGCTGGTG +
Preference number: 3 (lower is better)
Translates to: MPNWSCSGHGGL*TPTGAAWPGLV
Trigger: CACCAGCCCGGGCCACGCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp CTCTGGCTCTCCCACAGGCAATGCCAAGGCTGCGGGTaGGTATCGGGCGCCCGGCGCACCCTGAGGCGGTTC +
Preference number: 3 (lower is better)
Translates to: LWLSHRQCQGCG*VSGARRTLRRF
Trigger: GAACCGCCTCAGGGTGCGCCGGGCGCCCGATACCCACCCGCAGCCTTGGCATTGCCTGTGGGAGAGCCAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CAA 90 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTCTTCAGGCCTCCCAGTaGGGGTGGAGTAGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: GCGGELDARPALCRRPRPLQASQ*GWSRAA
Trigger: AGCAGCCCTACTCCACCCCAACTGGGAGGCCTGAAG...AGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CAA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGCTGGGCCGGCTCTCCTaGGGTGGGCCATGGGACTGT +
Preference number: 3 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGLGRLS*GGPWDC
Trigger: ACAGTCCCATGGCCCACCCAAGGAGAGCCGGCCCAG...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR TCA 72 bp CACAAGTCCCGAAGGGACACTGTGACGCCGCGCTACTaGAGGCGCCTGGGTTCCCGGACTCGGCCACCGCCT +
Preference number: 3 (lower is better)
Translates to: HKSRRDTVTPRY*RRLGSRTRPPP
Trigger: AGGCGGTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp ACGGGACGCTGTGAGATCGGGGGTGGCGAGAGTTGTTaGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGC +
Preference number: 3 (lower is better)
Translates to: TGRCEIGGGESC*ASVSLVPPAGG
Trigger: GCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTCGCCACCCCCGATCTCACAGCGTCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp ACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCGTTaGGGCCCACGGGACGCTGTGAGATCGGGGGTGGCG +
Preference number: 3 (lower is better)
Translates to: TAALLCVSAPLR*GPRDAVRSGVA
Trigger: CGCCACCCCCGATCTCACAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CAA 90 bp CGGACTGCCCGGCACGCGACACAGCGTGGGCATGGCGGTGCTGGGGCAGCTGGCTGTGAGTCTACCCTTTaGTTGTGCAACTGGGTCGGG +
Preference number: 3 (lower is better)
Translates to: RTARHATQRGHGGAGAAGCESTL*LCNWVG
Trigger: CCCGACCCAGTTGCACAACAAAAGGGTAGACTCACA...GCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCAGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 72 bp CTCCGAGCGTCCCACACAAGTCCCGAAGGGACACTGTaGCGCCGCGCTACTGAAGGCGCCTGGGTTCCCGGA +
Preference number: 3 (lower is better)
Translates to: LRASHTSPEGTL*RRATEGAWVPG
Trigger: TCCGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTGTGTGGGACGCTCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 72 bp GGCCCTCACTGGGGCCGTGACACTAGTGGCCATGGCTaGCTGCCTGACTGTAGTGCCCACCAACCCAGCCAC +
Preference number: 3 (lower is better)
Translates to: GPHWGRDTSGHG*LPDCSAHQPSH
Trigger: GTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATGGCCACTAGTGTCACGGCCCCAGTGAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp TGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCACTaGGGCCGTGACACTAGTGGCCATGGCTGCCTGCCT +
Preference number: 3 (lower is better)
Translates to: WTTSVSEARGPH*GRDTSGHGCLP
Trigger: AGGCAGGCAGCCATGGCCACTAGTGTCACGGCCCCAGTGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp AGCTGGATGCTGGGCCGGCTCTCCTTGGGTGGGCCATaGGACTGTGACTCCTGGTGGGGACACGCAGCCTTC +
Preference number: 3 (lower is better)
Translates to: SWMLGRLSLGGP*DCDSWWGHAAF
Trigger: GAAGGCTGCGTGTCCCCACCAGGAGTCACAGTCCCATGGCCCACCCAAGGAGAGCCGGCCCAGCATCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR-3UTR CAA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCCCCCTCCCATATCCCTaGAAGGGGCCACAATGGAGT +
Preference number: 3 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSPLPYP*KGPQWS
Trigger: ACTCCATTGTGGCCCCTTCAAGGGATATGGGAGGGG...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 72 bp GGATCGAGCCACCGACCTGATCTTGGACCACATCCGTaGGCGAAGCCAGGGGCCCTCACTGGGGCCGTGACA +
Preference number: 3 (lower is better)
Translates to: GSSHRPDLGPHP*AKPGALTGAVT
Trigger: TGTCACGGCCCCAGTGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGCTCGATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 72 bp TTTCCGCTCCTCTGCGTTGGGGCCCACGGGACGCTGTaGGATCGGGGGTGGCGAGAGTTGTTGGGCCTCAGT +
Preference number: 3 (lower is better)
Translates to: FPLLCVGAHGTL*DRGWRELLGLS
Trigger: ACTGAGGCCCAACAACTCTCGCCACCCCCGATCTCACAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 72 bp GAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGTaGTGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCC +
Preference number: 3 (lower is better)
Translates to: EVPGLDPPAGRG*CQRAAAAETQS
Trigger: GGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR GCA 72 bp CTCACTGGGGCCGTGACACTAGTGGCCATGGCTGCCTaGCTGACTGTAGTGCCCACCAACCCAGCCACTGCC +
Preference number: 3 (lower is better)
Translates to: LTGAVTLVAMAA*LTVVPTNPATA
Trigger: GGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATGGCCACTAGTGTCACGGCCCCAGTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 72 bp GGCGGTGGACGCCAAACAGTTGGCAACACGATTGGCTaGTGCGGGGTGATGACGTCAGGGGGCGGTGTCGGA +
Preference number: 3 (lower is better)
Translates to: GGGRQTVGNTIG*CGVMTSGGGVG
Trigger: TCCGACACCGCCCCCTGACGTCATCACCCCGCAGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCACCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp GTTCCTGCACTAGGGCGCCCTGCCTGCCCAGCCTTCTaGAGTTCTCAGGGGTCGGGTTTCTGGGCCCCTTCT +
Preference number: 3 (lower is better)
Translates to: VPALGRPACPAF*SSQGSGFWAPS
Trigger: AGAAGGGGCCCAGAAACCCGACCCCTGAGAACTCCAGAAGGCTGGGCAGGCAGGGCGCCCTAGTGCAGGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp CGGCCACGTAGCCCGGCCCGGATTGGACGTTGGCGGTaGACGCCAAACAGTTGGCAACACGATTGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: RPRSPARIGRWR*TPNSWQHDWLL
Trigger: CAGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp GCATGGCGGCCACGTAGCCCGGCCCGGATTGGACGTTaGCGGTGGACGCCAAACAGTTGGCAACACGATTGG +
Preference number: 3 (lower is better)
Translates to: AWRPRSPARIGR*RWTPNSWQHDW
Trigger: CCAATCGTGTTGCCAACTGTTTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCGCCATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CAA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCGAGTCTACCCTTTTGTaGTGCAACTGGGTCGGGTGG +
Preference number: 3 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSESTLL*CNWVGW
Trigger: CCACCCGACCCAGTTGCACAACAAAAGGGTAGACTC...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 72 bp GGTGGACGCCAAACAGTTGGCAACACGATTGGCTGCTaGGGGGTGATGACGTCAGGGGGCGGTGTCGGAGTG +
Preference number: 3 (lower is better)
Translates to: GGRQTVGNTIGC*GVMTSGGGVGV
Trigger: CACTCCGACACCGCCCCCTGACGTCATCACCCCGCAGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 72 bp AGCTGCTGCCTCTGTTGCTGGATCGAGCCACCGACCTaGTCTTGGACCACATCCGTGAGCGAAGCCAGGGGC +
Preference number: 3 (lower is better)
Translates to: SCCLCCWIEPPT*SWTTSVSEARG
Trigger: GCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGCTCGATCCAGCAACAGAGGCAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 72 bp TGGGACTGTGACTCCTGGTGGGGACACGCAGCCTTCTaGGGTCTCGTGGCCACAGTGGAGCTGAGCATGACC +
Preference number: 3 (lower is better)
Translates to: WDCDSWWGHAAF*GLVATVELSMT
Trigger: GGTCATGCTCAGCTCCACTGTGGCCACGAGACCTCAGAAGGCTGCGTGTCCCCACCAGGAGTCACAGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR CCA 72 bp GCCCGGATTGGACGTTGGCGGTGGACGCCAAACAGTTaGCAACACGATTGGCTGCTGCGGGGTGATGACGTC +
Preference number: 3 (lower is better)
Translates to: ARIGRWRWTPNS*QHDWLLRGDDV
Trigger: GACGTCATCACCCCGCAGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCACCGCCAACGTCCAATCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CCA 72 bp CCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTaGGGGTTGGGTGGGATGTGGACCTGGCGAGGTACC +
Preference number: 3 (lower is better)
Translates to: PTRVIYDSSLRS*GLGGMWTWRGT
Trigger: GGTACCTCGCCAGGTCCACATCCCACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
3UTR TCA 72 bp CTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTaGAGCTCCGTTCCTGCACTAGGGCGCCCTGCCTGC +
Preference number: 3 (lower is better)
Translates to: LVSSVLDGLQTS*SSVPALGRPAC
Trigger: GCAGGCAGGGCGCCCTAGTGCAGGAACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR GCA 72 bp TGCCTGCCTGACTGTAGTGCCCACCAACCCAGCCACTaGCACAGAGCTGCCACGCCAGCCTTGGTATCTACT +
Preference number: 3 (lower is better)
Translates to: CLPDCSAHQPSH*HRAATPALVST
Trigger: AGTAGATACCAAGGCTGGCGTGGCAGCTCTGTGGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CAA 90 bp TGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAAGTCTAGAGCTGCTGCCTCTGTaGCTGGATCGAGCCACCGAC +
Preference number: 3 (lower is better)
Translates to: CRFPVLSGAVWADCRGSLELLPL*LDRATD
Trigger: GTCGGTGGCTCGATCCAGCAACAGAGGCAGCAGCTC...TAGACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 72 bp CTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTaGCTGCCGAGGAAGTCTACCTGGTGCATGATGAGC +
Preference number: 3 (lower is better)
Translates to: LPFPCAKRSCLG*LPRKSTWCMMS
Trigger: GCTCATCATGCACCAGGTAGACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CAA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTCGGGGGTGGCGAGAGTaGTTGGGCCTCAGTTTCCCT +
Preference number: 3 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRRGWRE*LGLSFP
Trigger: AGGGAAACTGAGGCCCAACAACTCTCGCCACCCCCG...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR TCA 72 bp GAGTCCGTTCCTGCATTAGCTGCCTCAACTCCAATGTaGGTCTACCCTTTTGTTGTGCAACTGGGTCGGGTG +
Preference number: 3 (lower is better)
Translates to: ESVPALAASTPM*VYPFVVQLGRV
Trigger: CACCCGACCCAGTTGCACAACAAAAGGGTAGACTCACATTGGAGTTGAGGCAGCTAATGCAGGAACGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CAA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTGCTGCCACGCCAGCCTaGGTATCTACTTTTTATACA +
Preference number: 3 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRAATPA*VSTFYT
Trigger: TGTATAAAAAGTAGATACCAAGGCTGGCGTGGCAGC...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR-3UTR CAA 90 bp CTTTTTATACAAATCTCCTCTAGACTGTTCCAGGCTGCCTGCGGATTAAAGTGGCTCTCTGTGTCCTACTaGGGACGTAGGGGAACTTCA +
Preference number: 3 (lower is better)
Translates to: LFIQISSRLFQAACGLKWLSVSY*GRRGTS
Trigger: TGAAGTTCCCCTACGTCCCAAGTAGGACACAGAGAG...CCACTTTAATCCGCAGGCAGCCTGGAACAGTCTAGAGGAGATTTGTATAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR TCA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGGGAAGCGGTGGATGGTaGGTGGCGTGGGGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: VARAGELRAPGVGGRAKGGSGGW*VAWGGD
Trigger: GTCGCCGCCCCACGCCACTCACCATCCACCGCTTCC...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
76% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp CGCGGCGGCTGGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGCTTGGACCACATCCGTaGGCGAAGCCAGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RGGWVWRRVGRATGTVPPLGPHP*AKPGAL
Trigger: GAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAG...CGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp TGGCTCTCCCACAGGCAATGCCAAGGCTGCGGGTGGGTATCGGGCGCCCGGCGCGCGCCCGGCGCACCCTaGGGCGGTTCAGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: WLSHRQCQGCGWVSGARRAPGAP*GGSGPC
Trigger: ACATGGGCCTGAACCGCCTCAGGGTGCGCCGGGCGC...GCGCCGGGCGCCCGATACCCACCCGCAGCCTTGGCATTGCCTGTGGGAGAGCCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp GCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAACGGGGAGCACTGGCTGTaGCAGATCCGCGGGTTCACC +
Preference number: 4 (lower is better)
Translates to: ATGTVPPTSPWPRWGMPNGEHWL*QIRGFT
Trigger: GGTGAACCCGCGGATCTGTCACAGCCAGTGCTCCCC...GTTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTCGTGGCCCGGGCTGGTaGGTTGAGAGCGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GCGGELDARPALCRRPRPRGPGW*VESARG
Trigger: ACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCACG...AGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCTCGCCCTGGCCCCGCTaGGGGATGCCCAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGSPWPR*GMPNWS
Trigger: GGACCAGTTGGGCATCCCCCAGCGGGGCCAGGGCGA...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCGCGGCGGCTGGGTGTaGCGGAGAGTTGGACGCGCG +
Preference number: 4 (lower is better)
Translates to: GSGGPGVPQHLAKASWASRGGWV*RRVGRA
Trigger: CGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCG...AGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCCCGCCCGCAGGTGGCTaGCCTGGGGAATCCCGGACT +
Preference number: 4 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGPPAGG*PGESRT
Trigger: AGTCCGGGATTCCCCAGGCCAGCCACCTGCGGGCGG...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CGCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAACGGTGTCGGAGTGAATaGGGGCAGCATGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RDRHCAADLALAPLGDAQRCRSE*GQHEAG
Trigger: CCCGGCCTCATGCTGCCCCCATTCACTCCGACACCG...TTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCCCCGGGCTGGTGAGTTaGGAGCGCCAGGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSPGLVS*ERQGWA
Trigger: CGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGG...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGCACGCATCTCAGGGCTaGTGTGTGCCCGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VARAGELRAPGVGGRAKGHASQG*CVPGRS
Trigger: GGACCTTCCGGGCACACAGCAGCCCTGAGATGCGTG...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGGACTGCCCGGCACGCGACACAGCGTGGGCATGGCGGTGCTGGGGCAGCTGGCAGGCAATGCCAAGGCTaGGGGTGGGTATCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: RTARHATQRGHGGAGAAGRQCQG*GWVSGA
Trigger: GGCGCCCGATACCCACCCGCAGCCTTGGCATTGCCT...GCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCAGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGGCGCCCCTTCCCCACTaGAGCGTTGCTCTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: VARAGELRAPGVGGRAKGAPLPH*SVALRF
Trigger: GAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGC...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CGCGGCGGCTGGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGGCCTCCCAGTTGGGGTaGAGTAGGGCTGCTGACCCA +
Preference number: 4 (lower is better)
Translates to: RGGWVWRRVGRATGTVPPASQLG*SRAADP
Trigger: TGGGTCAGCAGCCCTACTCCACCCCAACTGGGAGGC...CGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp ACTGAAGGCGCCTGGGTTCCCGGACTCGGCCACCGCCTCGCCGCTTCCGCCCCTTGGGGGATGCCCAACTaGTCCTGCTCCGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: TEGAWVPGLGHRLAASAPWGMPN*SCSGHG
Trigger: GCCGTGGCCGGAGCAGGACCAGTTGGGCATCCCCCA...AGGGGCGGAAGCGGCGAGGCGGTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CGGACTGCCCGGCACGCGACACAGCGTGGGCATGGCGGTGCTGGGGCAGCTGGCGGTGTGGCGGAGAGTTaGACGCGCGACCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: RTARHATQRGHGGAGAAGGVAES*TRDRHC
Trigger: ACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACC...GCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCAGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCCGCCCCTCAGAAGCATaGCGGCCACGTAGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GRVGQGSPSTSPKLPGPLRPSEA*RPRSPA
Trigger: GGCCGGGCTACGTGGCCGCCATGCTTCTGAGGGGCG...GAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCTGGGCCATGGGACTGTaGCTCCTGGTGGGGACACGC +
Preference number: 4 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGWAMGL*LLVGTR
Trigger: GCGTGTCCCCACCAGGAGTCACAGTCCCATGGCCCA...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp ACTGAAGGCGCCTGGGTTCCCGGACTCGGCCACCGCCTCGCCGCTTCCGCCCCTGGGGGCAGTGCCAGGTaGGGTCCTGAGATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TEGAWVPGLGHRLAASAPGGSAR*GPEMVR
Trigger: CCTGACCATCTCAGGACCTCACCTGGCACTGCCCCC...AGGGGCGGAAGCGGCGAGGCGGTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTCCCGAAGGGACACTGTaGCGCCGCGCTACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: GCGGELDARPALCRRPRPPEGTL*RRATEG
Trigger: GCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGG...AGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGCGGCGGCTGGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGTTGAAGCTCCGTTCCTaGACTAGGGCGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RGGWVWRRVGRATGTVPPLKLRS*TRAPCL
Trigger: CAGGCAGGGCGCCCTAGTGCAGGAACGGAGCTTCAA...CGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGACTCCTTCATCTCCTTaGCCAGAGGCGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: VARAGELRAPGVGGRAKGTPSSP*PEAAPR
Trigger: CCGTGGAGCCGCCTCTGGCCAAGGAGATGAAGGAGT...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCGCCAGGGGCCCTCACTaGGGCCGTGACACTAGTGGC +
Preference number: 4 (lower is better)
Translates to: GRVGQGSPSTSPKLPGPLARGPH*GRDTSG
Trigger: GCCACTAGTGTCACGGCCCCAGTGAGGGCCCCTGGC...GAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp CGCGGCGGCTGGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGTGCCAGGTGAGGTCCTaGGATGGTCAGGGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RGGWVWRRVGRATGTVPPCQVRS*DGQGWD
Trigger: ATCCCAACCCTGACCATCTCAGGACCTCACCTGGCA...CGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGGGGCCACGGCGGCTTATaGACGCCAACGGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: ESCWASVSLVPPAGGWPGGHGGL*TPTGAA
Trigger: CGCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCC...CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCCGCACCTGGGCCAGCTaGGCCTCGAAGGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: GRVGQGSPSTSPKLPGPLRTWAS*ASKASF
Trigger: GAAGGATGCCTTCGAGGCGCAGCTGGCCCAGGTGCG...GAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCCCTCAGTTTCCCTGGTaGCGCCCGCAGGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSPQFPW*RPQVAG
Trigger: GCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGG...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCGTCCCGGGAGCCGAGTaGCCCCAAATTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGVPGAE*PQIAAL
Trigger: CAGAGCAGCAATTTGGGGGCACTCGGCTCCCGGGAC...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCTGGGCAGCTGGATGCTaGGCCGGCTCTCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GRVGQGSPSTSPKLPGPLWAAGC*AGSPWV
Trigger: CACCCAAGGAGAGCCGGCCCAGCATCCAGCTGCCCA...GAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCGGGTTGGGTGGGATGTaGACCTGGCGAGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGGLGGM*TWRGTR
Trigger: CCTGGTACCTCGCCAGGTCCACATCCCACCCAACCC...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GGAGTGAATGGGGGCAGCATGAGGCCGGGCGGCTTTTTGGGCGCCGGACAGCGGAGCTGGCGCGGCGGCTaGGTGTGGCGGAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: GVNGGSMRPGGFLGAGQRSWRGG*VWRRVG
Trigger: TCCAACTCTCCGCCACACCCAGCCGCCGCGCCAGCT...CCGCTGTCCGGCGCCCAAAAAGCCGCCCGGCCTCATGCTGCCCCCATTCACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCTCCGCTCCTCTGCGTTaGGGCCCACGGGACGCTGTG +
Preference number: 4 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSSAPLR*GPRDAV
Trigger: CACAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGA...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTCGGAGCTGTTTGGGCTaGCTGCCGAGGAAGTCTACC +
Preference number: 4 (lower is better)
Translates to: GCGGELDARPALCRRPRPRSCLG*LPRKST
Trigger: GGTAGACTTCCTCGGCAGTCAGCCCAAACAGCTCCG...AGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGCGGCGGCTGGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGCTGAACTCATTCTCCTaGTTCCGCACCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGGWVWRRVGRATGTVPPLNSFS*FRTCSS
Trigger: GGAGGAGCAGGTGCGGAAGCAGGAGAATGAGTTCAG...CGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CCCGCTGGGGGATGCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCTCCTGGGCAGCTGGATaGTGGGCCGGCTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PAGGCPTGPAPATAAYERSWAAG*WAGSPW
Trigger: CCAAGGAGAGCCGGCCCAGCATCCAGCTGCCCAGGA...GCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGCATCCCCCAGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCCTCTCCCACAGGCAATaGCAAGGCTGCGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGLSHRQ*QGCGWV
Trigger: TACCCACCCGCAGCCTTGGCATTGCCTGTGGGAGAG...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAAGCTGTTTGGGCTGACTaGCGAGGAAGTCTACCTGGT +
Preference number: 4 (lower is better)
Translates to: RDRHCAADLALAPLGDAQAVWAD*RGSLPG
Trigger: ACCAGGTAGACTTCCTCGGCAGTCAGCCCAAACAGC...TTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGGACTGCCCGGCACGCGACACAGCGTGGGCATGGCGGTGCTGGGGCAGCTGGCACTGCAGCGTTGCTCTaGGTTTCCGCTCCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: RTARHATQRGHGGAGAAGTAALL*VSAPLR
Trigger: ACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGT...GCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCAGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCAACTCGTGGCGCACCTaGGCCAGCTGCGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSNSWRT*ASCASK
Trigger: CTTCGAGGCGCAGCTGGCCCAGGTGCGCCACGAGTT...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CCCGCTGGGGGATGCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCAGGAAGGAGGTGGCCTaGACCAGAGCCGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PAGGCPTGPAPATAAYERRKEVA*TRAASR
Trigger: CCTGGAGGCGGCTCTGGTCCAGGCCACCTCCTTCCT...GCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGCATCCCCCAGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCTGGGACTGTGACTCCTaGTGGGGACACGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGWDCDS*WGHAAF
Trigger: GAAGGCTGCGTGTCCCCACCAGGAGTCACAGTCCCA...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp ACTGAAGGCGCCTGGGTTCCCGGACTCGGCCACCGCCTCGCCGCTTCCGCCCCTTCCTTGGGTGGGCCATaGGACTGTGACTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TEGAWVPGLGHRLAASAPSLGGP*DCDSWW
Trigger: CCACCAGGAGTCACAGTCCCATGGCCCACCCAAGGA...AGGGGCGGAAGCGGCGAGGCGGTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAACGGGGGTGACTGTGACTaGACCAGTCCATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ATGTVPPTSPWPRWGMPNGGDCD*TSPFLE
Trigger: CTCCAGAAATGGACTGGTCCAGTCACAGTCACCCCC...GTTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CGCGGCGGCTGGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGCTAAGCGGAGCTGTTTaGGCTGACTGCCGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RGGWVWRRVGRATGTVPPLSGAV*ADCRGS
Trigger: ACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAG...CGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CCCGCTGGGGGATGCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCGCTACTGAAGGCGCCTaGGTTCCCGGACTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: PAGGCPTGPAPATAAYERATEGA*VPGLGH
Trigger: GTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGTAGC...GCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGCATCCCCCAGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGGGGCTCCAAACTTCTTaGAGCTCCGTTCCTGCACTA +
Preference number: 4 (lower is better)
Translates to: VARAGELRAPGVGGRAKGGLQTS*SSVPAL
Trigger: TAGTGCAGGAACGGAGCTTCAAGAAGTTTGGAGCCC...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGCGGCGGCTGGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGTTATCCACCTGCAGCTaGAGGGATCTCTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: RGGWVWRRVGRATGTVPPLSTCS*RDLCSN
Trigger: GTTGGAGCAGAGATCCCTGCAGCTGCAGGTGGATAA...CGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCCAGCCGCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCCTAGGGCGCCCTGCCTaGCCAGCCTTCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSLGRPA*PAFWSS
Trigger: AGAACTCCAGAAGGCTGGGCAGGCAGGGCGCCCTAG...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAACTCTTTTTGGGAGCCATaGCTGATGGCAACCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ATGTVPPTSPWPRWGMPNSFWEP*LMATRA
Trigger: AGCCCTGGTTGCCATCAGCCATGGCTCCCAAAAAGA...GTTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGAACTCGTGGCGCACCTaGGCCAGCTGCGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: VGCGPGEVPGLDPPAGRGNSWRT*ASCASK
Trigger: CTTCGAGGCGCAGCTGGCCCAGGTGCGCCACGAGTT...CCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCCACATCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp CGCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAATTCGTGGTCACCTTGTaGAACTCATTGGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: RDRHCAADLALAPLGDAQFVVTL*NSLATR
Trigger: CCTCGTGGCCAATGAGTTCCACAAGGTGACCACGAA...TTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGAGGAAGGAGGTGGCCTaGACCAGAGCCGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VGCGPGEVPGLDPPAGRGRKEVA*TRAASR
Trigger: CCTGGAGGCGGCTCTGGTCCAGGCCACCTCCTTCCT...CCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCCACATCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGTCCTTGTGCCATGGCTaGAACGTCACGTCAACGTCA +
Preference number: 4 (lower is better)
Translates to: VARAGELRAPGVGGRAKGSLCHG*NVTSTS
Trigger: TGACGTTGACGTGACGTTCCAGCCATGGCACAAGGA...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp TGGCTCTCCCACAGGCAATGCCAAGGCTGCGGGTGGGTATCGGGCGCCCGGCGCTTCAGGCCTCCCAGTTaGGGTGGAGTAGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WLSHRQCQGCGWVSGARRFRPPS*GGVGLL
Trigger: CAGCAGCCCTACTCCACCCCAACTGGGAGGCCTGAA...GCGCCGGGCGCCCGATACCCACCCGCAGCCTTGGCATTGCCTGTGGGAGAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CGAGCCACCGACCTGATCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCAGCACGCGACACAGCGTaGGCATGGCGGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RATDLILDHIRERSQGPSARDTA*AWRCWG
Trigger: GCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGC...TGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CGAGCCACCGACCTGATCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCACCCCCGGGGAAGCGGTaGATGGTGAGTGGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RATDLILDHIRERSQGPSPPGKR*MVSGVG
Trigger: CCCCACGCCACTCACCATCCACCGCTTCCCCGGGGG...TGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGGGGACACGCAGCCTTCTaGGGTCTCGTGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: ESCWASVSLVPPAGGWPGGHAAF*GLVATV
Trigger: CACTGTGGCCACGAGACCTCAGAAGGCTGCGTGTCC...CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGCCGGCTGGTAGGGGGTaGTGTCAGAGAGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGPAGRG*CQRAAA
Trigger: TGCCGCAGCTCTCTGACATCACCCCCTACCAGCCGG...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR TCA 90 bp GGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTTATATGACAGCAGCCTaGGGTCCTGGGGGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GSGGPGVPQHLAKASWASYMTAA*GPGGWV
Trigger: CACCCAACCCCCAGGACCTCAGGCTGCTGTCATATA...AGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp CTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCGTGGCCCCCTCCCATATCCCTTaGAGGGGCCACAATGGAGTC +
Preference number: 4 (lower is better)
Translates to: LVLLRPRRLMNANGRSVAPSHIP*RGHNGV
Trigger: GACTCCATTGTGGCCCCTTCAAGGGATATGGGAGGG...GGCCACGCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp ACTGAAGGCGCCTGGGTTCCCGGACTCGGCCACCGCCTCGCCGCTTCCGCCCCTCGGAACATCTTCTCCTaGACAGCCAGCTCATCCCAC +
Preference number: 4 (lower is better)
Translates to: TEGAWVPGLGHRLAASAPRNIFS*TASSSH
Trigger: GTGGGATGAGCTGGCTGTGCAGGAGAAGATGTTCCG...AGGGGCGGAAGCGGCGAGGCGGTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAAATCTCTTTGGCTAGCTaGAAGTTCTGGAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RDRHCAADLALAPLGDAQISLAS*KFWSCS
Trigger: CGAGCAGCTCCAGAACTTGCAGCTAGCCAAAGAGAT...TTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGCGCACCTGGGCCAGCTaGGCCTCGAAGGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGRTWAS*ASKASF
Trigger: GAAGGATGCCTTCGAGGCGCAGCTGGCCCAGGTGCG...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp CGCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAATCATTAGCCAGTTCCTaGTGTAGCCGCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: RDRHCAADLALAPLGDAQSLASS*CSRCKS
Trigger: GGATTTGCAGCGGCTACAGCAGGAACTGGCTAATGA...TTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCCTGGCCCGAACCTTCTaGTCATTAGCCAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGLARTF*SLASSC
Trigger: GCAGGAACTGGCTAATGAGCAGAAGGTTCGGGCCAG...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp ACTGAAGGCGCCTGGGTTCCCGGACTCGGCCACCGCCTCGCCGCTTCCGCCCCTTGCAGCATCTCCTTGTaGCATGGCTGGAACGTCACG +
Preference number: 4 (lower is better)
Translates to: TEGAWVPGLGHRLAASAPCSISL*HGWNVT
Trigger: CGTGACGTTCCAGCCATGGCACAAGGAGATGCTGCA...AGGGGCGGAAGCGGCGAGGCGGTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGTCCTGGGCAGCTGGATaGTGGGCCGGCTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGSWAAG*WAGSPW
Trigger: CCAAGGAGAGCCGGCCCAGCATCCAGCTGCCCAGGA...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp AAGCATGGCGGCCACGTAGCCCGGCCCGGATTGGACGTTGGCGGTGGACGCCAACACCAACCCAGCCACTaGCACAGAGCTGCCACGCCA +
Preference number: 4 (lower is better)
Translates to: KHGGHVARPGLDVGGGRQHQPSH*HRAATP
Trigger: TGGCGTGGCAGCTCTGTGGCAGTGGCTGGGTTGGTG...TTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCGCCATGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGAATGGAGTCCGTTCCTaGATTAGCTGCCTCAACTCC +
Preference number: 4 (lower is better)
Translates to: VARAGELRAPGVGGRAKGNGVRS*ISCLNS
Trigger: GGAGTTGAGGCAGCTAATGCAGGAACGGACTCCATT...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAGGCCCCGCTGGGGGATaGCCAACTGGTCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: QGCRFPVLSGAVWADCRGGPAGG*PTGPAP
Trigger: CGGAGCAGGACCAGTTGGGCATCCCCCAGCGGGGCC...TCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCCCTTGTGGAACTCATTaGCCACGAGGTTCACGCGCT +
Preference number: 4 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGPCGTH*PRGSRA
Trigger: AGCGCGTGAACCTCGTGGCCAATGAGTTCCACAAGG...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAACTGGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGGATCTCTGCTCCAACTaGCTCAGCAGGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: QLGRVGQGSPSTSPKLPGDLCSN*LSRRRS
Trigger: GCTGCGCCTCCTGCTGAGCCAGTTGGAGCAGAGATC...CCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCCAGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCGTTGACACAGCGTGGGCATaGCGGTGCTGGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LRAPSPLQRCSAFPLLCVDTAWA*RCWGSW
Trigger: CCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTC...AACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CAA 72 bp GGAGTGAATGGGGGCAGCATGAGGCCGGGCGGCTTTTaGGGCGCCGGACAGCGGCTGAGTAGAGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GVNGGSMRPGGF*GAGQRLSRAMS
Trigger: GCTCATGGCTCTACTCAGCCGCTGTCCGGCGCCCAAAAAGCCGCCCGGCCTCATGCTGCCCCCATTCACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCTTTTGTGCCTGGCCATaGCCTTCTGGGTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGFCAWP*PSGCSP
Trigger: TGGAGAACACCCAGAAGGTCATGGCCAGGCACAAAA...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp ACCGACCTGATCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCACTGGGGCCGGCTGGTAGGGGGTaGTGTCAGAGAGCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: TDLILDHIRERSQGPSLGPAGRG*CQRAAA
Trigger: TGCCGCAGCTCTCTGACATCACCCCCTACCAGCCGG...CCCCAGTGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp TGGCTCTCCCACAGGCAATGCCAAGGCTGCGGGTGGGTATCGGGCGCCCGGCGCCACACGGGTGATATATaGCAGCAGCCTGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: WLSHRQCQGCGWVSGARRHTGDI*QQPEVL
Trigger: CAGGACCTCAGGCTGCTGTCATATATCACCCGTGTG...GCGCCGGGCGCCCGATACCCACCCGCAGCCTTGGCATTGCCTGTGGGAGAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCAGCAGCTTCATGCCTTaGTGGGAGACCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSSSFMP*WETLAI
Trigger: GATGGCCAGGGTCTCCCAGCAAGGCATGAAGCTGCT...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTTGTCTTCCCTTGAGCTaGTCATTCTCCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCGGELDARPALCRRPRPCLPLS*SFSCSS
Trigger: GCTGCTGCAGGAGAATGAGCAGCTCAAGGGAAGACA...AGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTTCTCTGGCTCTTCAGTaGCTGGTTATCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GCGGELDARPALCRRPRPSLALQ*LVIHLQ
Trigger: CTGCAGGTGGATAACCAGGCACTGAAGAGCCAGAGA...AGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGCACGCATCTCAGGGCTaGTGTGTGCCCGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGHASQG*CVPGRS
Trigger: GGACCTTCCGGGCACACAGCAGCCCTGAGATGCGTG...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp GGAGTGAATGGGGGCAGCATGAGGCCGGGCGGCTTTTTGGGCGCCGGACAGCGGACTAGTGGCCATGGCTaGCTGCCTGACTGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: GVNGGSMRPGGFLGAGQRTSGHG*LPDCSA
Trigger: GGCACTACAGTCAGGCAGGCAGCCATGGCCACTAGT...CCGCTGTCCGGCGCCCAAAAAGCCGCCCGGCCTCATGCTGCCCCCATTCACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCTCTACCCTTTTGTTGTaGAACTGGGTCGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GRVGQGSPSTSPKLPGPLSTLLL*NWVGWA
Trigger: GGCCCACCCGACCCAGTTGCACAACAAAAGGGTAGA...GAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CAACTGGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGAACACGATTGGCTGCTaGGGGGTGATGACGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QLGRVGQGSPSTSPKLPGNTIGC*GVMTSG
Trigger: CCCTGACGTCATCACCCCGCAGCAGCCAATCGTGTT...CCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCCAGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCGGCAACACGATTGGCTaGTGCGGGGTGATGACGTCA +
Preference number: 4 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSGNTIG*CGVMTS
Trigger: TGACGTCATCACCCCGCAGCAGCCAATCGTGTTGCC...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAACCCTTCTCCATCTCTTTaGCTAGCTGCAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ATGTVPPTSPWPRWGMPNPSPSL*LAASSG
Trigger: TCCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGG...GTTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CGGACTGCCCGGCACGCGACACAGCGTGGGCATGGCGGTGCTGGGGCAGCTGGCACGAGGTTCACGCGCTaGATGATCTCTTTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: RTARHATQRGHGGAGAAGTRFTR*MISFLS
Trigger: ACTGAGGAAAGAGATCATCCAGCGCGTGAACCTCGT...GCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCAGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CCTTCTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGGCAGAGACCCAGTCCTaGGCAGCTGGATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSSRPFPTAALLCVSAPLAETQS*AAGCWA
Trigger: GGCCCAGCATCCAGCTGCCCAGGACTGGGTCTCTGC...CAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGGGGTGGGATGTGGACCTaGCGAGGTACCAGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: ESCWASVSLVPPAGGWPGGGMWT*RGTRPR
Trigger: TCTAGGCCTGGTACCTCGCCAGGTCCACATCCCACC...CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGAGCAGCCTGAGGTCCTaGGGGTTGGGTGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGSSLRS*GLGGMW
Trigger: CCACATCCCACCCAACCCCCAGGACCTCAGGCTGCT...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGGGACCAGTCCATTTCTaGAGTAGGTTCTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VARAGELRAPGVGGRAKGGPVHF*SRFFSL
Trigger: CAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCC...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAACTGGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCTTTTGTTGTGCAACTaGGTCGGGTGGGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: QLGRVGQGSPSTSPKLPGLLLCN*VGWARG
Trigger: ACCCCTGGCCCACCCGACCCAGTTGCACAACAAAAG...CCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCCAGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CCCGCTGGGGGATGCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCTGGTGCATGATGAGCTaGACAAGCCCCTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PAGGCPTGPAPATAAYERWCMMS*TSPWGD
Trigger: GTCTCCCCAGGGGCTTGTCCAGCTCATCATGCACCA...GCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGCATCCCCCAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGACAGGGGTCGGGTTTCTaGGCCCCTTCTTCGCGCCCC +
Preference number: 4 (lower is better)
Translates to: QGCRFPVLSGAVWADCRGQGSGF*APSSRP
Trigger: GGGGCGCGAAGAAGGGGCCCAGAAACCCGACCCCTG...TCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp AAGCATGGCGGCCACGTAGCCCGGCCCGGATTGGACGTTGGCGGTGGACGCCAAGCCCGGATTGGACGTTaGCGGTGGACGCCAAACAGT +
Preference number: 4 (lower is better)
Translates to: KHGGHVARPGLDVGGGRQARIGR*RWTPNS
Trigger: ACTGTTTGGCGTCCACCGCCAACGTCCAATCCGGGC...TTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCGCCATGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CAA 72 bp CCTCAGAAGCATGGCGGCCACGTAGCCCGGCCCGGATaGGACGTTGGCGGTGGACGCCAAACAGTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: PQKHGGHVARPG*DVGGGRQTVGN
Trigger: GTTGCCAACTGTTTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCGCCATGCTTCTGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp CTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCGTGGCCTGCCGTTGTTCTCTTTaGTGGCCCGCTTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LVLLRPRRLMNANGRSVACRCSL*WPAWLS
Trigger: AGACAACCAAGCGGGCCATCAAAGAGAACAACGGCA...GGCCACGCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp AGTAACCAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCGCCCACGGGACGCTGTaGGATCGGGGGTGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SNQGCRFPVLSGAVWADCAHGTL*DRGWRE
Trigger: CTCTCGCCACCCCCGATCTCACAGCGTCCCGTGGGC...GCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTGGTTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTTGTTTTCTTAACTGGTaGGTTCAGTGCTCGACGGGC +
Preference number: 4 (lower is better)
Translates to: GCGGELDARPALCRRPRPCFLNW*VQCSTG
Trigger: GCCCGTCGAGCACTGAACTCACCAGTTAAGAAAACA...AGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp ACTGAAGGCGCCTGGGTTCCCGGACTCGGCCACCGCCTCGCCGCTTCCGCCCCTTTGTTATTGGCCAGCTaGTCAAACTCCTGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: TEGAWVPGLGHRLAASAPLLLAS*SNSWRN
Trigger: GTTCCGCCAGGAGTTTGAGCAGCTGGCCAATAACAA...AGGGGCGGAAGCGGCGAGGCGGTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTTGCAAGTTCTGGAGCTaGTCGTTGAGGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: GCGGELDARPALCRRPRPCKFWS*SLRSVI
Trigger: GATCACAGACCTCAACGAGCAGCTCCAGAACTTGCA...AGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCTCCTGCTTCCGCACCTaGTCCTCCAGCAATGTGAAC +
Preference number: 4 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSSCFRT*SSSNVN
Trigger: GTTCACATTGCTGGAGGAGCAGGTGCGGAAGCAGGA...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGCCTGCAGCAGCTTCATaGCTTGCTGGGAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGPAAAS*LAGRPW
Trigger: CCAGGGTCTCCCAGCAAGGCATGAAGCTGCTGCAGG...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp GGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCAGCTGCTCATTCTCCTaGAGCAGCTTCATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GRVGQGSPSTSPKLPGPLSCSFS*SSFMPC
Trigger: GCAAGGCATGAAGCTGCTGCAGGAGAATGAGCAGCT...GAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CAAGTCCCGAAGGGACACTGTGACGCCGCGCTACTGAAGGCGCCTGGGTTCCCGTGCTGCTGCTCCAGCTaGAGGCTCAGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QVPKGHCDAALLKAPGFPCCCSS*RLSWSL
Trigger: GAGAGACCAGCTGAGCCTGCAGCTGGAGCAGCAGCA...CGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CAAGTCCCGAAGGGACACTGTGACGCCGCGCTACTGAAGGCGCCTGGGTTCCCGCGCTGCAAATCCACCTaGTGCTGCTCCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QVPKGHCDAALLKAPGFPRCKST*CCSSCR
Trigger: CCTGCAGCTGGAGCAGCAGCAGGTGGATTTGCAGCG...CGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp ACCGACCTGATCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCACTGGGGATGCCCAACTGGTCCTaGTCCGGCCACGGCGGCTTA +
Preference number: 4 (lower is better)
Translates to: TDLILDHIRERSQGPSLGMPNWS*SGHGGL
Trigger: TAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGCAT...CCCCAGTGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CCTTCTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGTCATCCCACTTCCGCTaGTACCGGGCTAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: PSSRPFPTAALLCVSAPLSSHFR*YRASRS
Trigger: GGACCGGCTAGCCCGGTACCAGCGGAAGTGGGATGA...CAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CATGGCTGCCTGCCTGACTGTAGTGCCCACCAACCCAGCCACTGCCACAGAGCTGTCTCCTGGAACTCGTaGCGCACCTGGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HGCLPDCSAHQPSHCHRAVSWNS*RTWASC
Trigger: GCAGCTGGCCCAGGTGCGCCACGAGTTCCAGGAGAC...AGCTCTGTGGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCGTGGCCAGGATGATCTTCTGGTaGCCTCTTTTGTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LVLLRPRRLMNANGRSVARMIFW*PLLCLA
Trigger: GGCCAGGCACAAAAGAGGCCACCAGAAGATCATCCT...GGCCACGCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp ACCGACCTGATCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCACTGGGGGAGCCGCCTCCAGGCTaGCCCGAACCTTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TDLILDHIRERSQGPSLGEPPPG*PEPSAH
Trigger: ATGAGCAGAAGGTTCGGGCCAGCCTGGAGGCGGCTC...CCCCAGTGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGTGGGACTGTGACTCCTaGTGGGGACACGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGWDCDS*WGHAAF
Trigger: GAAGGCTGCGTGTCCCCACCAGGAGTCACAGTCCCA...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR TCA 90 bp CCTTCTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGTTTGGGAGCCATGGCTaGTGGCAACCAGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSSRPFPTAALLCVSAPLFGSHG*WQPGLQ
Trigger: CTGGAGCCCTGGTTGCCATCAGCCATGGCTCCCAAA...CAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCGCCTCAACTCCAATGTaGGTCTACCCTTTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGASTPM*VYPFVV
Trigger: CACAACAAAAGGGTAGACTCACATTGGAGTTGAGGC...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCGCTCCTTGCCTGCCTTaGTCACACTCTTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSAPCLP*SHSFWE
Trigger: CTCCCAAAAAGAGTGTGAGCAAGGCAGGCAAGGAGC...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAACTTCTCCAGGTTGTATaGATAGTCCCTGAACTCATT +
Preference number: 4 (lower is better)
Translates to: RDRHCAADLALAPLGDAQLLQVV*IVPELI
Trigger: AATGAGTTCAGGGACTATGCATACAACCTGGAGAAG...TTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGCTGGCCCGAACCTTCTaGTCATTAGCCAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VGCGPGEVPGLDPPAGRGLARTF*SLASSC
Trigger: GCAGGAACTGGCTAATGAGCAGAAGGTTCGGGCCAG...CCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCCACATCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp CGAGCCACCGACCTGATCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCAAGCTGCTGCCTCTGTTaGTGGATCGAGCCACCGACC +
Preference number: 4 (lower is better)
Translates to: RATDLILDHIRERSQGPSSCCLC*WIEPPT
Trigger: GGTCGGTGGCTCGATCCAGCAACAGAGGCAGCAGCT...TGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CATGGCTGCCTGCCTGACTGTAGTGCCCACCAACCCAGCCACTGCCACAGAGCTCGGTTCAGGCCCATGTaGTGGGCTGCTTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: HGCLPDCSAHQPSHCHRARFRPM*WAASPL
Trigger: CAGGGGAGAAGCAGCCCAGCACATGGGCCTGAACCG...AGCTCTGTGGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCGTGGCCAGGAAGTCTACCTGGTaGATGATGAGCTGGACAAGC +
Preference number: 4 (lower is better)
Translates to: LVLLRPRRLMNANGRSVARKSTW*MMSWTS
Trigger: GCTTGTCCAGCTCATCATGCACCAGGTAGACTTCCT...GGCCACGCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCTGCTCACACTCTTTTTaGGAGCCATGGCTGATGGCA +
Preference number: 4 (lower is better)
Translates to: GRVGQGSPSTSPKLPGPLCSHSF*EPWLMA
Trigger: TGCCATCAGCCATGGCTCCCAAAAAGAGTGTGAGCA...GAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAACTGGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGAGCTGCTCAAACTCCTaGCGGAACATCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QLGRVGQGSPSTSPKLPGSCSNS*RNIFSC
Trigger: GCAGGAGAAGATGTTCCGCCAGGAGTTTGAGCAGCT...CCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCCAGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GGAGTGAATGGGGGCAGCATGAGGCCGGGCGGCTTTTTGGGCGCCGGACAGCGGGCTAGCTGCAAGTTCTaGAGCTGCTCGTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GVNGGSMRPGGFLGAGQRASCKF*SCSLRS
Trigger: AGACCTCAACGAGCAGCTCCAGAACTTGCAGCTAGC...CCGCTGTCCGGCGCCCAAAAAGCCGCCCGGCCTCATGCTGCCCCCATTCACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CCTTCTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGTGGTCCTTGGTCTCCTaGAACTCGTGGCGCACCTGG +
Preference number: 4 (lower is better)
Translates to: PSSRPFPTAALLCVSAPLWSLVS*NSWRTW
Trigger: CCAGGTGCGCCACGAGTTCCAGGAGACCAAGGACCA...CAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAACTGGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCTCAGCTGGTCTCTCTaGCTCTTCAGTGCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: QLGRVGQGSPSTSPKLPGLSWSL*LFSAWL
Trigger: TAACCAGGCACTGAAGAGCCAGAGAGACCAGCTGAG...CCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCCAGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTCCAGTCCTGGGCAGCTaGATGCTGGGCCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGPVLGS*MLGRLS
Trigger: GGAGAGCCGGCCCAGCATCCAGCTGCCCAGGACTGG...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGTCCTGCTTCCGCACCTaGTCCTCCAGCAATGTGAAC +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGSCFRT*SSSNVN
Trigger: GTTCACATTGCTGGAGGAGCAGGTGCGGAAGCAGGA...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp CATGGCTGCCTGCCTGACTGTAGTGCCCACCAACCCAGCCACTGCCACAGAGCTCCTGCAGCAGCTTCATaGCTTGCTGGGAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: HGCLPDCSAHQPSHCHRAPAAAS*LAGRPW
Trigger: CCAGGGTCTCCCAGCAAGGCATGAAGCTGCTGCAGG...AGCTCTGTGGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGTCTCTGGCTCTTCAGTaGCTGGTTATCCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: VGCGPGEVPGLDPPAGRGSLALQ*LVIHLQ
Trigger: CTGCAGGTGGATAACCAGGCACTGAAGAGCCAGAGA...CCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCCACATCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCTTGAGCTCCAGTTGCTaGATGGCTTTGGGTACTTCG +
Preference number: 4 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSLSSSC*MALGTS
Trigger: CGAAGTACCCAAAGCCATGCAGCAACTGGAGCTCAA...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CCCGCTGGGGGATGCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCTGTTGAGCTCCAGTTaGTGCATGGCTTTGGGTACT +
Preference number: 4 (lower is better)
Translates to: PAGGCPTGPAPATAAYERLLSSS*CMALGT
Trigger: AGTACCCAAAGCCATGCAGCAACTGGAGCTCAACAG...GCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGCATCCCCCAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCGTCTCCTGGAACTCGTaGCGCACCTGGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLVSWNS*RTWASC
Trigger: GCAGCTGGCCCAGGTGCGCCACGAGTTCCAGGAGAC...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGGCCCACATCCGGTTCGTaGTCACCTTGTGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: ESCWASVSLVPPAGGWPGPTSGS*SPCGTH
Trigger: ATGAGTTCCACAAGGTGACCACGAACCGGATGTGGG...CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGCCCACATCCGGTTCGTaGTCACCTTGTGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: VGCGPGEVPGLDPPAGRGPTSGS*SPCGTH
Trigger: ATGAGTTCCACAAGGTGACCACGAACCGGATGTGGG...CCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCCACATCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCGCAGAGACCCAGTCCTaGGCAGCTGGATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLAETQS*AAGCWA
Trigger: GGCCCAGCATCCAGCTGCCCAGGACTGGGTCTCTGC...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp CAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGACTCGCCAAAGCTTCCTaGGCCTCTCTGGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QGCRFPVLSGAVWADCRGLAKAS*ASLALP
Trigger: TGGGAGAGCCAGAGAGGCCCAGGAAGCTTTGGCGAG...TCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CGAGCCACCGACCTGATCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCAAGTCTCCACAGGAAATaGGCTGCTCTGACCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RATDLILDHIRERSQGPSSLHRK*AALTQP
Trigger: CGGCTGGGTCAGAGCAGCCCATTTCCTGTGGAGACT...TGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCGTTGCTCCAGTTGCTGCATaGCTTTGGGTACTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LRAPSPLQRCSAFPLLCVAPVAA*LWVLRG
Trigger: CCCCCGAAGTACCCAAAGCCATGCAGCAACTGGAGC...AACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GAGAGTTGTTGGGCCTCAGTTTCCCTGGTGCCGCCCGCAGGTGGCTGGCCTGGGATTGGACGTTGGCGGTaGACGCCAAACAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: ESCWASVSLVPPAGGWPGIGRWR*TPNSWQ
Trigger: TTGCCAACTGTTTGGCGTCCACCGCCAACGTCCAAT...CCCAGGCCAGCCACCTGCGGGCGGCACCAGGGAAACTGAGGCCCAACAACTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
3UTR CAA 72 bp CTGCCTCTGTTGCTGGATCGAGCCACCGACCTGATCTaGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LPLLLDRATDLI*DHIRERSQGPS
Trigger: TGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGCTCGATCCAGCAACAGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGTGCCGTTGTTCTCTTTaGTGGCCCGCTTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGCRCSL*WPAWLS
Trigger: AGACAACCAAGCGGGCCATCAAAGAGAACAACGGCA...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR TCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCGGACACGCAGCCTTCTaGGGTCTCGTGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLGHAAF*GLVATV
Trigger: CACTGTGGCCACGAGACCTCAGAAGGCTGCGTGTCC...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR TCA 90 bp CAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAATCGAGCCACCGACCTaGTCTTGGACCACATCCGTG +
Preference number: 4 (lower is better)
Translates to: QGCRFPVLSGAVWADCRGIEPPT*SWTTSV
Trigger: CACGGATGTGGTCCAAGATCAGGTCGGTGGCTCGAT...TCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp TGGCTCTCCCACAGGCAATGCCAAGGCTGCGGGTGGGTATCGGGCGCCCGGCGCTTCAAGCTCCTTGCCTaGCTTGCTCACACTCTTTTT +
Preference number: 4 (lower is better)
Translates to: WLSHRQCQGCGWVSGARRFKLLA*LAHTLF
Trigger: AAAAAGAGTGTGAGCAAGGCAGGCAAGGAGCTTGAA...GCGCCGGGCGCCCGATACCCACCCGCAGCCTTGGCATTGCCTGTGGGAGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGTGTCTTCCCTTGAGCTaGTCATTCTCCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGCLPLS*SFSCSS
Trigger: GCTGCTGCAGGAGAATGAGCAGCTCAAGGGAAGACA...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGTTATCCACCTGCAGCTaGAGGGATCTCTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGLSTCS*RDLCSN
Trigger: GTTGGAGCAGAGATCCCTGCAGCTGCAGGTGGATAA...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp GGAGTGAATGGGGGCAGCATGAGGCCGGGCGGCTTTTTGGGCGCCGGACAGCGGTCCTCTTCATCGCGGTaGATCTGCAGAATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GVNGGSMRPGGFLGAGQRSSSSR*ICRMFC
Trigger: ACAGAACATTCTGCAGATGCACCGCGATGAAGAGGA...CCGCTGTCCGGCGCCCAAAAAGCCGCCCGGCCTCATGCTGCCCCCATTCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp AAGCATGGCGGCCACGTAGCCCGGCCCGGATTGGACGTTGGCGGTGGACGCCAAATGACCAGCAGTTGCTaGAGCATCTCCTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KHGGHVARPGLDVGGGRQMTSSC*SISLCH
Trigger: ATGGCACAAGGAGATGCTGCAGCAACTGCTGGTCAT...TTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCGCCATGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp AGTAACCAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCCACAGGAAATGGGCTaGTCTGACCCAGCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SNQGCRFPVLSGAVWADCPQEMG*SDPAGA
Trigger: TGCCCCGGCTGGGTCAGAGCAGCCCATTTCCTGTGG...GCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTGGTTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp AGTAACCAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCTGGGAGTCGGGACAGTaGCTCTCTGGGCAGATGGGC +
Preference number: 4 (lower is better)
Translates to: SNQGCRFPVLSGAVWADCWESGQ*LSGQMG
Trigger: GCCCATCTGCCCAGAGAGGCACTGTCCCGACTCCCA...GCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTGGTTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTTCATCCCACTTCCGCTaGTACCGGGCTAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGSSHFR*YRASRS
Trigger: GGACCGGCTAGCCCGGTACCAGCGGAAGTGGGATGA...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGAGGATGATCTTCTGGTaGCCTCTTTTGTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGRMIFW*PLLCLA
Trigger: GGCCAGGCACAAAAGAGGCCACCAGAAGATCATCCT...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCATGAGGATGATCTTCTaGTGGCCTCTTTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSMRMIF*WPLLCL
Trigger: CAGGCACAAAAGAGGCCACCAGAAGATCATCCTCAT...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGTCCTGCTGCTGCTCCTaGCACTTCTTAGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGSCCCS*HFLVSM
Trigger: CATGCTGACTAAGAAGTGCCAGGAGCAGCAGCAGGA...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp TTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTTCCTGCCAAGGCTGCGGGTaGGTATCGGGCGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LTGEFSARRAPNFLKLRSCQGCG*VSGARR
Trigger: GCGCCGGGCGCCCGATACCCACCCGCAGCCTTGGCA...GGAACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGATCTCTTTGGCTAGCTaGAAGTTCTGGAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGISLAS*KFWSCS
Trigger: CGAGCAGCTCCAGAACTTGCAGCTAGCCAAAGAGAT...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp AAGCATGGCGGCCACGTAGCCCGGCCCGGATTGGACGTTGGCGGTGGACGCCAAGCAGCTCCAGCTGTTTaGACAGATTGTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KHGGHVARPGLDVGGGRQAAPAV*TDCSVF
Trigger: GAAGACAGAACAATCTGTGCAAACAGCTGGAGCTGC...TTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCGCCATGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCCGCTGCAAATCCACCTaGTGCTGCTCCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLRCKST*CCSSCR
Trigger: CCTGCAGCTGGAGCAGCAGCAGGTGGATTTGCAGCG...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp GGAGTGAATGGGGGCAGCATGAGGCCGGGCGGCTTTTTGGGCGCCGGACAGCGGGTGCCCCCAAATTGCTaGTCTGTTTTCTTAACTGGT +
Preference number: 4 (lower is better)
Translates to: GVNGGSMRPGGFLGAGQRVPPNC*SVFLTG
Trigger: ACCAGTTAAGAAAACAGAGCAGCAATTTGGGGGCAC...CCGCTGTCCGGCGCCCAAAAAGCCGCCCGGCCTCATGCTGCCCCCATTCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAATCTCATCCACCTGCTaGTTGAGCGTGCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QGCRFPVLSGAVWADCRGISSTC*LSVRLR
Trigger: CCTCAAGCGCACGCTCAACCAGCAGGTGGATGAGAT...TCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGCCTTCTCCATCTCTTTaGCTAGCTGCAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VGCGPGEVPGLDPPAGRGPSPSL*LAASSG
Trigger: TCCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGG...CCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCCACATCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGACGAGGTTCACGCGCTaGATGATCTCTTTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGTRFTR*MISFLS
Trigger: ACTGAGGAAAGAGATCATCCAGCGCGTGAACCTCGT...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCTCCTTGGGTGGGCCATaGGACTGTGACTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLSLGGP*DCDSWW
Trigger: CCACCAGGAGTCACAGTCCCATGGCCCACCCAAGGA...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGTCTCTGTGTCCTACTTaGGACGTAGGGGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGSLCPT*DVGELQ
Trigger: CTGAAGTTCCCCTACGTCCCAAGTAGGACACAGAGA...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp GTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGGGACCAGTCCATTTCTaGAGTAGGTTCTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VGCGPGEVPGLDPPAGRGGPVHF*SRFFSL
Trigger: CAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCC...CCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCCACATCCCAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp CAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAAGTTGGCAACACGATTaGCTGCTGCGGGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: QGCRFPVLSGAVWADCRGSWQHD*LLRGDD
Trigger: GTCATCACCCCGCAGCAGCCAATCGTGTTGCCAACT...TCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp ACCGACCTGATCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCACTGGGGTGGACGCCAAACAGTTaGCAACACGATTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TDLILDHIRERSQGPSLGWTPNS*QHDWLL
Trigger: CAGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCA...CCCCAGTGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGTGTATGCATAGTCCCTaGACTCATTCTCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGCMHSP*THSPAS
Trigger: GGAAGCAGGAGAATGAGTTCAGGGACTATGCATACA...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp AGTAACCAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCGTGACCTCCTCTTTCTaGAGCCGGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SNQGCRFPVLSGAVWADCVTSSF*SRNSSR
Trigger: CCTGGAGGAGTTCCGGCTGCAGAAAGAGGAGGTCAC...GCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTGGTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp CAAGTCCCGAAGGGACACTGTGACGCCGCGCTACTGAAGGCGCCTGGGTTCCCGTCATCGCGGTGCATCTaGAGAATGTTCTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: QVPKGHCDAALLKAPGFPSSRCI*RMFCRK
Trigger: CTTCCTACAGAACATTCTGCAGATGCACCGCGATGA...CGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp TGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAAGTCTATCTGTAGGAAGGAGGTaGCCTGGACCAGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: CRFPVLSGAVWADCRGSLSVGRR*PGPEPP
Trigger: AGGCGGCTCTGGTCCAGGCCACCTCCTTCCTACAGA...TAGACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGACATCTCCTTGTGCCATaGCTGGAACGTCACGTCAAC +
Preference number: 4 (lower is better)
Translates to: QGCRFPVLSGAVWADCRGHLLVP*LERHVN
Trigger: GTTGACGTGACGTTCCAGCCATGGCACAAGGAGATG...TCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CCTTCTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGTCTCTGTGTCCTACTTaGGACGTAGGGGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: PSSRPFPTAALLCVSAPLSLCPT*DVGELQ
Trigger: CTGAAGTTCCCCTACGTCCCAAGTAGGACACAGAGA...CAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp AATTGCTGCTCTGTTTTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACGTGACGCCGCGCTACTaGAGGCGCCTGGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: NCCSVFLTGEFSARRAPNVTPRY*RRLGSR
Trigger: CCGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCAC...GTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAAAACAGAGCAGCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTGAGACCCTGGCCATCTaGAGGGTAATGCCGTTGTTC +
Preference number: 4 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGETLAI*RVMPLF
Trigger: GAACAACGGCATTACCCTGCAGATGGCCAGGGTCTC...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp TGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAAGTCTAGGCAGTAACCAGGGCTaGCGTTTCCCTGTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: CRFPVLSGAVWADCRGSLGSNQG*RFPVLS
Trigger: GCTTAGCACAGGGAAACGGCAGCCCTGGTTACTGCC...TAGACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTTGGGGAATCCCGGACTaGCCGGCACGCGACACAGCG +
Preference number: 4 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRWGIPD*PARDTA
Trigger: CGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCA...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTGCGTTTCCGCTCCTCTaGGTTGGGGCCCACGGGACG +
Preference number: 4 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRAFPLL*VGAHGT
Trigger: CGTCCCGTGGGCCCCAACGCAGAGGAGCGGAAACGC...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGGAAGTTTTCCCTGTCTaGAGAATGTTCTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: VGCGPGEVPGLDPPAGRGEVFPV*RMFCRK
Trigger: CTTCCTACAGAACATTCTGCAGACAGGGAAAACTTC...CCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCCACATCCCAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp CAAGTCCCGAAGGGACACTGTGACGCCGCGCTACTGAAGGCGCCTGGGTTCCCGTCTCCTTCTTGTTATTaGCCAGCTGCTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: QVPKGHCDAALLKAPGFPSPSCY*PAAQTP
Trigger: AGGAGTTTGAGCAGCTGGCCAATAACAAGAAGGAGA...CGGGAACCCAGGCGCCTTCAGTAGCGCGGCGTCACAGTGTCCCTTCGGGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTATCTCATCCACCTGCTaGTTGAGCGTGCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGISSTC*LSVRLR
Trigger: CCTCAAGCGCACGCTCAACCAGCAGGTGGATGAGAT...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCCCTTGTGGAACTCATTaGCCACGAGGTTCACGCGCT +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLPCGTH*PRGSRA
Trigger: AGCGCGTGAACCTCGTGGCCAATGAGTTCCACAAGG...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCTGGCTCTTCAGTGCCTaGTTATCCACCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLWLFSA*LSTCSC
Trigger: GCAGCTGCAGGTGGATAACCAGGCACTGAAGAGCCA...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTCCAGTCCTGGGCAGCTaGATGCTGGGCCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRPVLGS*MLGRLS
Trigger: GGAGAGCCGGCCCAGCATCCAGCTGCCCAGGACTGG...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTGGGGGTGACTGTGACTaGACCAGTCCATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGGGDCD*TSPFLE
Trigger: CTCCAGAAATGGACTGGTCCAGTCACAGTCACCCCC...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp AATTGCTGCTCTGTTTTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACCGCAGGTGGCTGGCCTaGGGAATCCCGGACTGCCCG +
Preference number: 4 (lower is better)
Translates to: NCCSVFLTGEFSARRAPNRRWLA*GIPDCP
Trigger: CGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTGCG...GTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAAAACAGAGCAGCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp TGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAAGTCTAGGTGGCGAGAGTTGTTaGGCCTCAGTTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CRFPVLSGAVWADCRGSLGGESC*ASVSLV
Trigger: CACCAGGGAAACTGAGGCCCAACAACTCTCGCCACC...TAGACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp CATGGCTGCCTGCCTGACTGTAGTGCCCACCAACCCAGCCACTGCCACAGAGCTTGTATGCATAGTCCCTaGACTCATTCTCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: HGCLPDCSAHQPSHCHRACMHSP*THSPAS
Trigger: GGAAGCAGGAGAATGAGTTCAGGGACTATGCATACA...AGCTCTGTGGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCTTTTGTGCCTGGCCATaGCCTTCTGGGTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLFCAWP*PSGCSP
Trigger: TGGAGAACACCCAGAAGGTCATGGCCAGGCACAAAA...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp TGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAAGTCTAGAGACCCTGGCCATCTaGAGGGTAATGCCGTTGTTC +
Preference number: 4 (lower is better)
Translates to: CRFPVLSGAVWADCRGSLETLAI*RVMPLF
Trigger: GAACAACGGCATTACCCTGCAGATGGCCAGGGTCTC...TAGACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCAGCTGCTCATTCTCCTaGAGCAGCTTCATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLSCSFS*SSFMPC
Trigger: GCAAGGCATGAAGCTGCTGCAGGAGAATGAGCAGCT...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTCTCAGGGCTGCTGTGTaGCCGGAAGGTCCCCACACG +
Preference number: 4 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPLRAAV*PEGPHT
Trigger: CGTGTGGGGACCTTCCGGGCACACAGCAGCCCTGAG...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp GTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGAAATTCCAACCTCAGTaGCCATTTCCACGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: VGCGPGEVPGLDPPAGRGKFQPQ*PFPRSF
Trigger: AAAACTTCGTGGAAATGGGCACTGAGGTTGGAATTT...CCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCCACATCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCGCTAGCTGCAAGTTCTaGAGCTGCTCGTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLASCKF*SCSLRS
Trigger: AGACCTCAACGAGCAGCTCCAGAACTTGCAGCTAGC...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCTTCGTGGTCACCTTGTaGAACTCATTGGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLFVVTL*NSLATR
Trigger: CCTCGTGGCCAATGAGTTCCACAAGGTGACCACGAA...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCCATCTCCTTGTGCCATaGCTGGAACGTCACGTCAAC +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLHLLVP*LERHVN
Trigger: GTTGACGTGACGTTCCAGCCATGGCACAAGGAGATG...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCTTGTTATTGGCCAGCTaGTCAAACTCCTGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLLLLAS*SNSWRN
Trigger: GTTCCGCCAGGAGTTTGAGCAGCTGGCCAATAACAA...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCTGCAAGTTCTGGAGCTaGTCGTTGAGGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLCKFWS*SLRSVI
Trigger: GATCACAGACCTCAACGAGCAGCTCCAGAACTTGCA...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTTCATTAGCCAGTTCCTaGTGTAGCCGCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGSLASS*CSRCKS
Trigger: GGATTTGCAGCGGCTACAGCAGGAACTGGCTAATGA...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTATGACCAGCAGTTGCTaGAGCATCTCCTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGMTSSC*SISLCH
Trigger: ATGGCACAAGGAGATGCTGCAGCAACTGCTGGTCAT...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp AATTGCTGCTCTGTTTTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACCTCAGGGCTGCTGTGTaGCCGGAAGGTCCCCACACG +
Preference number: 4 (lower is better)
Translates to: NCCSVFLTGEFSARRAPNLRAAV*PEGPHT
Trigger: CGTGTGGGGACCTTCCGGGCACACAGCAGCCCTGAG...GTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAAAACAGAGCAGCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTGAGCCGCCTCCAGGCTaGCCCGAACCTTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPEPPPG*PEPSAH
Trigger: ATGAGCAGAAGGTTCGGGCCAGCCTGGAGGCGGCTC...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTAGCAGCCTGAGGTCCTaGGGGTTGGGTGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRSSLRS*GLGGMW
Trigger: CCACATCCCACCCAACCCCCAGGACCTCAGGCTGCT...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CCTTCTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCTGCCACGCCAGCCTTaGTATCTACTTTTTATACAA +
Preference number: 4 (lower is better)
Translates to: PSSRPFPTAALLCVSAPLLPRQP*YLLFIQ
Trigger: TTGTATAAAAAGTAGATACCAAGGCTGGCGTGGCAG...CAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR TCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCCGGTGCATCTGTTGGTaGGGGTGGGGTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSRCICW*GWGGSR
Trigger: CCTGCTGCCACCCCACCCTCACCAACAGATGCACCG...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTTGGTCCTTGGTCTCCTaGAACTCGTGGCGCACCTGG +
Preference number: 4 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPWSLVS*NSWRTW
Trigger: CCAGGTGCGCCACGAGTTCCAGGAGACCAAGGACCA...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTATGAGGATGATCTTCTaGTGGCCTCTTTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGMRMIF*WPLLCL
Trigger: CAGGCACAAAAGAGGCCACCAGAAGATCATCCTCAT...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTGATCTCTGCTCCAACTaGCTCAGCAGGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPDLCSN*LSRRRS
Trigger: GCTGCGCCTCCTGCTGAGCCAGTTGGAGCAGAGATC...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCTGGGCAGCTGGATGCTaGGCCGGCTCTCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSWAAGC*AGSPWV
Trigger: CACCCAAGGAGAGCCGGCCCAGCATCCAGCTGCCCA...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp TTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTTCCTGTGGTCCCTCATCATaGGAGTCGGGACAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LTGEFSARRAPNFLKLRSCGPSS*ESGQCL
Trigger: GAGGCACTGTCCCGACTCCCATGATGAGGGACCACA...GGAACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTTTCAAGCTCCTTGCCTaGCTTGCTCACACTCTTTTT +
Preference number: 4 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGFKLLA*LAHTLF
Trigger: AAAAAGAGTGTGAGCAAGGCAGGCAAGGAGCTTGAA...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTGTGACCTCCTCTTTCTaGAGCCGGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPVTSSF*SRNSSR
Trigger: CCTGGAGGAGTTCCGGCTGCAGAAAGAGGAGGTCAC...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCTCTCCTTCTTGTTATTaGCCAGCTGCTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLSPSCY*PAAQTP
Trigger: AGGAGTTTGAGCAGCTGGCCAATAACAAGAAGGAGA...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTGTGATCTCATCCACCTaGTGGTTGAGCGTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRVISST*WLSVRL
Trigger: CAAGCGCACGCTCAACCAGCAGGTGGATGAGATCAC...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTGTGATCTCATCCACCTaGTGGTTGAGCGTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPVISST*WLSVRL
Trigger: CAAGCGCACGCTCAACCAGCAGGTGGATGAGATCAC...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTCTGAACTCATTCTCCTaGTTCCGCACCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPLNSFS*FRTCSS
Trigger: GGAGGAGCAGGTGCGGAAGCAGGAGAATGAGTTCAG...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCCTTCTCCAGGTTGTATaGATAGTCCCTGAACTCATT +
Preference number: 4 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLLLQVV*IVPELI
Trigger: AATGAGTTCAGGGACTATGCATACAACCTGGAGAAG...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCTGCTGCTGCTCCAGCTaGAGGCTCAGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSCCCSS*RLSWSL
Trigger: GAGAGACCAGCTGAGCCTGCAGCTGGAGCAGCAGCA...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp TTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTTCCAGCGGGGAAAGGACTTaGCAGATTTTCGCCGCAAGT +
Preference number: 4 (lower is better)
Translates to: LTGEFSARRAPNFLKLRSSGERT*QIFAAS
Trigger: ACTTGCGGCGAAAATCTGGCAAGTCCTTTCCCCGCT...GGAACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCACTCCTTCATCTCCTTaGCCAGAGGCGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSTPSSP*PEAAPR
Trigger: CCGTGGAGCCGCCTCTGGCCAAGGAGATGAAGGAGT...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp CTTTTTATACAAATCTCCTCTAGACTGTTCCAGGCTGCCTGCGGATTAAAGTGGGGGTTGGGTGGGATGTaGACCTGGCGAGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: LFIQISSRLFQAACGLKWGLGGM*TWRGTR
Trigger: CCTGGTACCTCGCCAGGTCCACATCCCACCCAACCC...CCACTTTAATCCGCAGGCAGCCTGGAACAGTCTAGAGGAGATTTGTATAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000614677.1
CDS-3UTR CCA 90 bp TTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTTCCCCGAGGAAGTCTACCTaGTGCATGATGAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: LTGEFSARRAPNFLKLRSPRKST*CMMSWT
Trigger: TGTCCAGCTCATCATGCACCAGGTAGACTTCCTCGG...GGAACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR GCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTGCTCCTTGCCTGCCTTaGTCACACTCTTTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPAPCLP*SHSFWE
Trigger: CTCCCAAAAAGAGTGTGAGCAAGGCAGGCAAGGAGC...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCAGCAGCTTCATGCCTTaGTGGGAGACCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSSSFMP*WETLAI
Trigger: GATGGCCAGGGTCTCCCAGCAAGGCATGAAGCTGCT...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTTCCTTGGTGTCCTGCTaGTGCTCCTGGCACTTCTTA +
Preference number: 4 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPSLVSC*CSWHFL
Trigger: TAAGAAGTGCCAGGAGCAGCAGCAGGACACCAAGGA...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTTCCTGCTGCTGCTCCTaGCACTTCTTAGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRSCCCS*HFLVSM
Trigger: CATGCTGACTAAGAAGTGCCAGGAGCAGCAGCAGGA...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp AATTGCTGCTCTGTTTTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTGGCTCTTCAGTGCCTaGTTATCCACCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NCCSVFLTGEFSARRAPNWLFSA*LSTCSC
Trigger: GCAGCTGCAGGTGGATAACCAGGCACTGAAGAGCCA...GTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAAAACAGAGCAGCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp CTTTTTATACAAATCTCCTCTAGACTGTTCCAGGCTGCCTGCGGATTAAAGTGGTCTGTAGGAAGGAGGTaGCCTGGACCAGAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LFIQISSRLFQAACGLKWSVGRR*PGPEPP
Trigger: AGGCGGCTCTGGTCCAGGCCACCTCCTTCCTACAGA...CCACTTTAATCCGCAGGCAGCCTGGAACAGTCTAGAGGAGATTTGTATAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000614677.1
CDS-3UTR CCA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTTCCTTGTGCCATGGCTaGAACGTCACGTCAACGTCA +
Preference number: 4 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPSLCHG*NVTSTS
Trigger: TGACGTTGACGTGACGTTCCAGCCATGGCACAAGGA...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp CTTTTTATACAAATCTCCTCTAGACTGTTCCAGGCTGCCTGCGGATTAAAGTGGGGTGGGATGTGGACCTaGCGAGGTACCAGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: LFIQISSRLFQAACGLKWGGMWT*RGTRPR
Trigger: TCTAGGCCTGGTACCTCGCCAGGTCCACATCCCACC...CCACTTTAATCCGCAGGCAGCCTGGAACAGTCTAGAGGAGATTTGTATAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000614677.1
CDS-3UTR TCA 90 bp CTTTTTATACAAATCTCCTCTAGACTGTTCCAGGCTGCCTGCGGATTAAAGTGGTATATGACAGCAGCCTaGGGTCCTGGGGGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LFIQISSRLFQAACGLKWYMTAA*GPGGWV
Trigger: CACCCAACCCCCAGGACCTCAGGCTGCTGTCATATA...CCACTTTAATCCGCAGGCAGCCTGGAACAGTCTAGAGGAGATTTGTATAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000614677.1
CDS-3UTR TCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCCACACGGGTGATATATaGCAGCAGCCTGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSHTGDI*QQPEVL
Trigger: CAGGACCTCAGGCTGCTGTCATATATCACCCGTGTG...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCTGCAGCATCTCCTTGTaGCATGGCTGGAACGTCACG +
Preference number: 4 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSCSISL*HGWNVT
Trigger: CGTGACGTTCCAGCCATGGCACAAGGAGATGCTGCA...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCAGCTGCTCAAACTCCTaGCGGAACATCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSSCSNS*RNIFSC
Trigger: GCAGGAGAAGATGTTCCGCCAGGAGTTTGAGCAGCT...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR GCA 90 bp CTTTTTATACAAATCTCCTCTAGACTGTTCCAGGCTGCCTGCGGATTAAAGTGGTCCTTGGTGTCCTGCTaGTGCTCCTGGCACTTCTTA +
Preference number: 4 (lower is better)
Translates to: LFIQISSRLFQAACGLKWSLVSC*CSWHFL
Trigger: TAAGAAGTGCCAGGAGCAGCAGCAGGACACCAAGGA...CCACTTTAATCCGCAGGCAGCCTGGAACAGTCTAGAGGAGATTTGTATAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000614677.1
CDS-3UTR GCA 90 bp AATTGCTGCTCTGTTTTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACCGTTCCTGCATTAGCTaGCTCAACTCCAATGTGAGT +
Preference number: 4 (lower is better)
Translates to: NCCSVFLTGEFSARRAPNRSCIS*LNSNVS
Trigger: ACTCACATTGGAGTTGAGGCAGCTAATGCAGGAACG...GTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAAAACAGAGCAGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCTGCTCACACTCTTTTTaGGAGCCATGGCTGATGGCA +
Preference number: 4 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSCSHSF*EPWLMA
Trigger: TGCCATCAGCCATGGCTCCCAAAAAGAGTGTGAGCA...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CCA 90 bp CTTTTTATACAAATCTCCTCTAGACTGTTCCAGGCTGCCTGCGGATTAAAGTGGCTCAGCTGGTCTCTCTaGCTCTTCAGTGCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: LFIQISSRLFQAACGLKWLSWSL*LFSAWL
Trigger: TAACCAGGCACTGAAGAGCCAGAGAGACCAGCTGAG...CCACTTTAATCCGCAGGCAGCCTGGAACAGTCTAGAGGAGATTTGTATAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000614677.1
CDS-3UTR GCA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCGCAGCTCCAGCTGTTTaGACAGATTGTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSAAPAV*TDCSVF
Trigger: GAAGACAGAACAATCTGTGCAAACAGCTGGAGCTGC...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp GCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAACCTGGGCCGGCTCTCCTaGGGTGGGCCATGGGACTGT +
Preference number: 5 (lower is better)
Translates to: ATGTVPPTSPWPRWGMPNLGRLS*GGPWDC
Trigger: ACAGTCCCATGGCCCACCCAAGGAGAGCCGGCCCAG...GTTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCGTGGCCGCCCGGGCTGGTGAGTaGAGAGCGCCAGGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LVLLRPRRLMNANGRSVAARAGE*RAPGVG
Trigger: GCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGC...GGCCACGCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CCCGCTGGGGGATGCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCAGGCCGGGCGGCTTTTaGGGCGCCGGACAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: PAGGCPTGPAPATAAYERRPGGF*GAGQRL
Trigger: CAGCCGCTGTCCGGCGCCCAAAAAGCCGCCCGGCCT...GCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGCATCCCCCAGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp ACTGAAGGCGCCTGGGTTCCCGGACTCGGCCACCGCCTCGCCGCTTCCGCCCCTGGCCCGGATTGGACGTaGGCGGTGGACGCCAAACAG +
Preference number: 5 (lower is better)
Translates to: TEGAWVPGLGHRLAASAPGPDWT*AVDAKQ
Trigger: CTGTTTGGCGTCCACCGCCAACGTCCAATCCGGGCC...AGGGGCGGAAGCGGCGAGGCGGTGGCCGAGTCCGGGAACCCAGGCGCCTTCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS CCA 90 bp GGGCCAGAGCTTGGCCCCAGCCTGCACCCGCCGCCCGCCCCTCCGTaGGCCATACGCACTTCAGTGCCTGGTTATCCACCTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GPELGPSLHPPPAPP*AIRTSVPGYPPAAA
Trigger: TGCAGCTGCAGGTGGATAACCAGGCACTGAAGTGCGTATGGCCCACGGAGGGGCGGGCGGCGGGTGCAGGCTGGGGCCAAGCTCTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373293.5
CDS-3UTR CAA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGACCTTGTGGAACTCATaGGCCACGAGGTTCACGCGC +
Preference number: 5 (lower is better)
Translates to: VARAGELRAPGVGGRAKGTLWNS*ATRFTR
Trigger: GCGCGTGAACCTCGTGGCCAATGAGTTCCACAAGGT...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CGCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAATCTTTGATGGCCCGCTaGGTTGTCTCCCACATCCGG +
Preference number: 5 (lower is better)
Translates to: RDRHCAADLALAPLGDAQSLMAR*VVSHIR
Trigger: CCGGATGTGGGAGACAACCAAGCGGGCCATCAAAGA...TTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CAGGTGGCTGGCCTGGGGAATCCCGGACTGCCCGGCACGCGACACAGCGTGGGCGAGCTGCTGCCTCTGTaGCTGGATCGAGCCACCGAC +
Preference number: 5 (lower is better)
Translates to: QVAGLGNPGLPGTRHSVGELLPL*LDRATD
Trigger: GTCGGTGGCTCGATCCAGCAACAGAGGCAGCAGCTC...GCCCACGCTGTGTCGCGTGCCGGGCAGTCCGGGATTCCCCAGGCCAGCCACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GGAGTGAATGGGGGCAGCATGAGGCCGGGCGGCTTTTTGGGCGCCGGACAGCGGTTCCGCTCCTCTGCGTaGGGGCCCACGGGACGCTGT +
Preference number: 5 (lower is better)
Translates to: GVNGGSMRPGGFLGAGQRFRSSA*GPTGRC
Trigger: ACAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGAA...CCGCTGTCCGGCGCCCAAAAAGCCGCCCGGCCTCATGCTGCCCCCATTCACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CGCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAATGCAGGGTAATGCCGTaGTTCTCTTTGATGGCCCGC +
Preference number: 5 (lower is better)
Translates to: RDRHCAADLALAPLGDAQCRVMP*FSLMAR
Trigger: GCGGGCCATCAAAGAGAACAACGGCATTACCCTGCA...TTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGCCTGTTGAGCTCCAGTaGCTGCATGGCTTTGGGTAC +
Preference number: 5 (lower is better)
Translates to: VARAGELRAPGVGGRAKGPVELQ*LHGFGY
Trigger: GTACCCAAAGCCATGCAGCAACTGGAGCTCAACAGG...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCCGGGGGTGGCGAGAGTaGTTGGGCCTCAGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: GRVGQGSPSTSPKLPGPLRGWRE*LGLSFP
Trigger: AGGGAAACTGAGGCCCAACAACTCTCGCCACCCCCG...GAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS TCA 90 bp CGTTGGGGCCCACGGGACGCTCTCCTTGGGTGGGCCATGGGACTGTaGCTCCTGGTGGGGACACGCAGCCTTCTGAGGTCTCGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: RWGPRDALLGWAMGL*LLVGTRSLLRSRGH
Trigger: GTGGCCACGAGACCTCAGAAGGCTGCGTGTCCCCACCAGGAGTCACAGTCCCATGGCCCACCCAAGGAGAGCGTCCCGTGGGCCCCAACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373293.5
CDS-3UTR CAA 90 bp ACCGACCTGATCTTGGACCACATCCGTGAGCGAAGCCAGGGGCCCTCACTGGGGGGGTGTGGCGGAGAGTaGGACGCGCGACCGGCACTG +
Preference number: 5 (lower is better)
Translates to: TDLILDHIRERSQGPSLGGCGGE*DARPAL
Trigger: CAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC...CCCCAGTGAGGGCCCCTGGCTTCGCTCACGGATGTGGTCCAAGATCAGGTCGGT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCTTCCCCACTGCAGCGTaGCTCTGCGTTTCCGCTCCT +
Preference number: 5 (lower is better)
Translates to: GRVGQGSPSTSPKLPGPLFPTAA*LCVSAP
Trigger: AGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAA...GAGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CGGACTGCCCGGCACGCGACACAGCGTGGGCATGGCGGTGCTGGGGCAGCTGGCGTGGACGCCAAACAGTaGGCAACACGATTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: RTARHATQRGHGGAGAAGVDAKQ*ATRLAA
Trigger: AGCAGCCAATCGTGTTGCCAACTGTTTGGCGTCCAC...GCCAGCTGCCCCAGCACCGCCATGCCCACGCTGTGTCGCGTGCCGGGCAGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CAACTGGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGGTGGTGAGCTGGTCCTaGGTCTCCTGGAACTCGTGG +
Preference number: 5 (lower is better)
Translates to: QLGRVGQGSPSTSPKLPGVVSWS*VSWNSW
Trigger: CCACGAGTTCCAGGAGACCAAGGACCAGCTCACCAC...CCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCCAGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GTGGCCCGGGCTGGTGAGTTGAGAGCGCCAGGGGTGGGCGGGCGGGCCAAGGGGTCCAGCAATGTGAACTaGTCCGTGACCTCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: VARAGELRAPGVGGRAKGSSNVN*SVTSSF
Trigger: GAAAGAGGAGGTCACGGACAAGTTCACATTGCTGGA...CCCCTTGGCCCGCCCGCCCACCCCTGGCGCTCTCAACTCACCAGCCCGGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CAACTGGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGGCCACCGACCTGATCTaGGACCACATCCGTGAGCGA +
Preference number: 5 (lower is better)
Translates to: QLGRVGQGSPSTSPKLPGATDLI*DHIRER
Trigger: TCGCTCACGGATGTGGTCCAAGATCAGGTCGGTGGC...CCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCCAGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCCCCTCCCATATCCCTaGAAGGGGCCACAATGGAGT +
Preference number: 5 (lower is better)
Translates to: GSGGPGVPQHLAKASWASPLPYP*KGPQWS
Trigger: ACTCCATTGTGGCCCCTTCAAGGGATATGGGAGGGG...AGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CATGGCTGCCTGCCTGACTGTAGTGCCCACCAACCCAGCCACTGCCACAGAGCTGTAGCCCGGCCCGGATaGGACGTTGGCGGTGGACGC +
Preference number: 5 (lower is better)
Translates to: HGCLPDCSAHQPSHCHRAVARPG*DVGGGR
Trigger: GCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTAC...AGCTCTGTGGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTTTGCTCACACTCTTTTaGGGAGCCATGGCTGATGGC +
Preference number: 5 (lower is better)
Translates to: GCGGELDARPALCRRPRPLLTLF*GAMADG
Trigger: GCCATCAGCCATGGCTCCCAAAAAGAGTGTGAGCAA...AGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCTGGTTGAGCGTGCGCTaGAGGAAGGCCACAATCTCC +
Preference number: 5 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSWLSVR*RKATIS
Trigger: GGAGATTGTGGCCTTCCTCAAGCGCACGCTCAACCA...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GGGTGTGGCGGAGAGTTGGACGCGCGACCGGCACTGTGCCGCCGACCTCGCCCTATGCCGTTGTTCTCTTaGATGGCCCGCTTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: GCGGELDARPALCRRPRPMPLFS*MARLVV
Trigger: GACAACCAAGCGGGCCATCAAAGAGAACAACGGCAT...AGGGCGAGGTCGGCGGCACAGTGCCGGTCGCGCGTCCAACTCTCCGCCACACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CGCGACCGGCACTGTGCCGCCGACCTCGCCCTGGCCCCGCTGGGGGATGCCCAAGCTGCCACGCCAGCCTaGGTATCTACTTTTTATACA +
Preference number: 5 (lower is better)
Translates to: RDRHCAADLALAPLGDAQAATPA*VSTFYT
Trigger: TGTATAAAAAGTAGATACCAAGGCTGGCGTGGCAGC...TTGGGCATCCCCCAGCGGGGCCAGGGCGAGGTCGGCGGCACAGTGCCGGTCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS TCA 90 bp GAGAACCAGGGGCACGCATCTCTCCTTGGGTGGGCCATGGGACTGTaGCTCCTGGTGGGGACACGCAGCCTTCTGAGGTCTCGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: ENQGHASLLGWAMGL*LLVGTRSLLRSRGH
Trigger: GTGGCCACGAGACCTCAGAAGGCTGCGTGTCCCCACCAGGAGTCACAGTCCCATGGCCCACCCAAGGAGAGATGCGTGCCCCTGGTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464092.1
CDS GCA 90 bp GAGGTGGCCTGGACCAGAGCCGCCTCCAGGCTGGCCCGAACCTTCTaGTCATTAGCCAGTTCCTGCTGTAGCCGCTGCAAATCCACCTGC +
Preference number: 5 (lower is better)
Translates to: EVAWTRAASRLARTF*SLASSCCSRCKSTC
Trigger: GCAGGTGGATTTGCAGCGGCTACAGCAGGAACTGGCTAATGAGCAGAAGGTTCGGGCCAGCCTGGAGGCGGCTCTGGTCCAGGCCACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373293.5
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 90 bp CCTCCAGGTCTCGGATCTGGATGTGGTAGAACTCCTTCATCTCCTTaGCCAGAGGCGGCTCCACGGCCACCACCGGCTCCTTCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: PPGLGSGCGRTPSSP*PEAAPRPPPAPSCP
Trigger: GGGGCAAGAAGGAGCCGGTGGTGGCCGTGGAGCCGCCTCTGGCCAAGGAGATGAAGGAGTTCTACCACATCCAGATCCGAGACCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS-3UTR CAA 90 bp CAACTGGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGTTGACTTCAAGCTCCTaGCCTGCCTTGCTCACACTC +
Preference number: 5 (lower is better)
Translates to: QLGRVGQGSPSTSPKLPGLTSSS*PALLTL
Trigger: GAGTGTGAGCAAGGCAGGCAAGGAGCTTGAAGTCAA...CCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCCAGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTGCCACAATCTCCTTCTaGTTATTGGCCAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GSGGPGVPQHLAKASWASATISF*LLASCS
Trigger: TGAGCAGCTGGCCAATAACAAGAAGGAGATTGTGGC...AGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGTCATCCACCTGCTGGTaGAGCGTGCGCTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGSSTCW*SVRLRK
Trigger: CTTCCTCAAGCGCACGCTCAACCAGCAGGTGGATGA...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp GCCCAACTGGTCCTGCTCCGGCCACGGCGGCTTATGAACGCCAACGGGCGCAGCCTCTCTGTGTCCTACTaGGGACGTAGGGGAACTTCA +
Preference number: 5 (lower is better)
Translates to: AQLVLLRPRRLMNANGRSLSVSY*GRRGTS
Trigger: TGAAGTTCCCCTACGTCCCAAGTAGGACACAGAGAG...GCTGCGCCCGTTGGCGTTCATAAGCCGCCGTGGCCGGAGCAGGACCAGTTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp AAGCATGGCGGCCACGTAGCCCGGCCCGGATTGGACGTTGGCGGTGGACGCCAAGAGTCTACCCTTTTGTaGTGCAACTGGGTCGGGTGG +
Preference number: 5 (lower is better)
Translates to: KHGGHVARPGLDVGGGRQESTLL*CNWVGW
Trigger: CCACCCGACCCAGTTGCACAACAAAAGGGTAGACTC...TTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCGCCATGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GGGTCGGGTGGGCCAGGGGTCCCCCAGCACCTCGCCAAAGCTTCCTGGGCCTCTCCGAGTGCCCCCAAATaGCTGCTCTGTTTTCTTAAC +
Preference number: 5 (lower is better)
Translates to: GSGGPGVPQHLAKASWASPSAPK*LLCFLN
Trigger: GTTAAGAAAACAGAGCAGCAATTTGGGGGCACTCGG...AGAGGCCCAGGAAGCTTTGGCGAGGTGCTGGGGGACCCCTGGCCCACCCGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS CCA 90 bp TCCGTGGTGAGCTGGTCCTTGGTCTCCTGGAACTCGTGGCGCACCTaGGCCAGCTGCGCCTCGAAGGCATCCTTCTCCATCTCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: SVVSWSLVSWNSWRT*ASCASKASFSISLA
Trigger: AGCCAAAGAGATGGAGAAGGATGCCTTCGAGGCGCAGCTGGCCCAGGTGCGCCACGAGTTCCAGGAGACCAAGGACCAGCTCACCACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS-3UTR CAA 90 bp GTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGTTGCTCACACTCTTTTaGGGAGCCATGGCTGATGGC +
Preference number: 5 (lower is better)
Translates to: VGCGPGEVPGLDPPAGRGLLTLF*GAMADG
Trigger: GCCATCAGCCATGGCTCCCAAAAAGAGTGTGAGCAA...CCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCCACATCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp GTGGGATGTGGACCTGGCGAGGTACCAGGCCTAGATCCCCCGGCTGGTAGGGGGCTCTCTGTGTCCTACTaGGGACGTAGGGGAACTTCA +
Preference number: 5 (lower is better)
Translates to: VGCGPGEVPGLDPPAGRGLSVSY*GRRGTS
Trigger: TGAAGTTCCCCTACGTCCCAAGTAGGACACAGAGAG...CCCCCTACCAGCCGGGGGATCTAGGCCTGGTACCTCGCCAGGTCCACATCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS GCA 90 bp AGCTGGTCTCTCTGGCTCTTCAGTGCCTGGTTATCCACCTGCAGCTaGAGGGATCTCTGCTCCAACTGGCTCAGCAGGAGGCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SWSLWLFSAWLSTCS*RDLCSNWLSRRRSS
Trigger: GGAGCTGCGCCTCCTGCTGAGCCAGTTGGAGCAGAGATCCCTGCAGCTGCAGGTGGATAACCAGGCACTGAAGAGCCAGAGAGACCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000614677.1
CDS GCA 90 bp AGGCTCAGCTGGTCTCTCTGGCTCTTCAGTGCCTGGTTATCCACCTaGAGCTGCAGGGATCTCTGCTCCAACTGGCTCAGCAGGAGGCGC +
Preference number: 5 (lower is better)
Translates to: RLSWSLWLFSAWLST*SCRDLCSNWLSRRR
Trigger: GCGCCTCCTGCTGAGCCAGTTGGAGCAGAGATCCCTGCAGCTGCAGGTGGATAACCAGGCACTGAAGAGCCAGAGAGACCAGCTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000614677.1
CDS CCA 90 bp CCTCTTCATCGCGGTGCATCTGCAGAATGTTCTGTAGGAAGGAGGTaGCCTGGACCAGAGCCGCCTCCAGGCTGGCCCGAACCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: PLHRGASAECSVGRR*PGPEPPPGWPEPSA
Trigger: AGCAGAAGGTTCGGGCCAGCCTGGAGGCGGCTCTGGTCCAGGCCACCTCCTTCCTACAGAACATTCTGCAGATGCACCGCGATGAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp AAGCATGGCGGCCACGTAGCCCGGCCCGGATTGGACGTTGGCGGTGGACGCCAATCCTTCTCCATCTCTTaGGCTAGCTGCAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: KHGGHVARPGLDVGGGRQSFSIS*ASCKFW
Trigger: CCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGGA...TTGGCGTCCACCGCCAACGTCCAATCCGGGCCGGGCTACGTGGCCGCCATGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGTTCCTCAGTCTGTCCTaGTCCAGCACCGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGFLSLS*SSTDFF
Trigger: GAAGAAGTCGGTGCTGGACAAGGACAGACTGAGGAA...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp AGTAACCAGGGCTGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCTTCAGGCCTCCCAGTaGGGGTGGAGTAGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SNQGCRFPVLSGAVWADCLQASQ*GWSRAA
Trigger: AGCAGCCCTACTCCACCCCAACTGGGAGGCCTGAAG...GCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCAGCCCTGGTTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTATCGCGGTGCATCTGTaGGTGAGGGTGGGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGIAVHL*VRVGWQ
Trigger: CTGCCACCCCACCCTCACCAACAGATGCACCGCGAT...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS CCA 90 bp CTTCAAGCTCCTTGCCTGCCTTGCTCACACTCTTTTTGGGAGCCATaGCTGATGGCAACCAGGGCTCCAGGCCCCAGGAAGAGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LQAPCLPCSHSFWEP*LMATRAPGPRKRPG
Trigger: ACCTGGCCTCTTCCTGGGGCCTGGAGCCCTGGTTGCCATCAGCCATGGCTCCCAAAAAGAGTGTGAGCAAGGCAGGCAAGGAGCTTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CCTTCTTCGCGCCCCTTCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGAGCTCCTTGCCTGCCTaGCTCACACTCTTTTTGGGA +
Preference number: 5 (lower is better)
Translates to: PSSRPFPTAALLCVSAPLSSLPA*LTLFLG
Trigger: TCCCAAAAAGAGTGTGAGCAAGGCAGGCAAGGAGCT...CAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGAAGGGGCGCGAAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp CGGCTGGTAGGGGGTGATGTCAGAGAGCTGCGGCAGCAGAGACCCAGTCCTGGGGCCACAATCTCCTTCTaGTTATTGGCCAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: RLVGGDVRELRQQRPSPGATISF*LLASCS
Trigger: TGAGCAGCTGGCCAATAACAAGAAGGAGATTGTGGC...CCCAGGACTGGGTCTCTGCTGCCGCAGCTCTCTGACATCACCCCCTACCAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTGTGGTGAGCTGGTCCTaGGTCTCCTGGAACTCGTGG +
Preference number: 5 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGVVSWS*VSWNSW
Trigger: CCACGAGTTCCAGGAGACCAAGGACCAGCTCACCAC...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS GCA 90 bp TTGTTATTGGCCAGCTGCTCAAACTCCTGGCGGAACATCTTCTCCTaGACAGCCAGCTCATCCCACTTCCGCTGGTACCGGGCTAGCCGG +
Preference number: 5 (lower is better)
Translates to: LLLASCSNSWRNIFS*TASSSHFRWYRASR
Trigger: CCGGCTAGCCCGGTACCAGCGGAAGTGGGATGAGCTGGCTGTGCAGGAGAAGATGTTCCGCCAGGAGTTTGAGCAGCTGGCCAATAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 90 bp TCATCGCGGTGCATCTGCAGAATGTTCTGTAGGAAGGAGGTGGCCTaGACCAGAGCCGCCTCCAGGCTGGCCCGAACCTTCTGCTCATTA +
Preference number: 5 (lower is better)
Translates to: SSRCICRMFCRKEVA*TRAASRLARTFCSL
Trigger: TAATGAGCAGAAGGTTCGGGCCAGCCTGGAGGCGGCTCTGGTCCAGGCCACCTCCTTCCTACAGAACATTCTGCAGATGCACCGCGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS CCA 90 bp TCCACGAAGTTTTCCCTGTCTGCAGAATGTTCTGTAGGAAGGAGGTaGCCTGGACCAGAGCCGCCTCCAGGCTGGCCCGAACCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: STKFSLSAECSVGRR*PGPEPPPGWPEPSA
Trigger: AGCAGAAGGTTCGGGCCAGCCTGGAGGCGGCTCTGGTCCAGGCCACCTCCTTCCTACAGAACATTCTGCAGACAGGGAAAACTTCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCTGGTTGAGCGTGCGCTaGAGGAAGGCCACAATCTCC +
Preference number: 5 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLWLSVR*RKATIS
Trigger: GGAGATTGTGGCCTTCCTCAAGCGCACGCTCAACCA...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp CATGGCTGCCTGCCTGACTGTAGTGCCCACCAACCCAGCCACTGCCACAGAGCTTTCTGGAGCTGCTCGTaGAGGTCTGTGATCTCATCC +
Preference number: 5 (lower is better)
Translates to: HGCLPDCSAHQPSHCHRAFWSCS*RSVISS
Trigger: GGATGAGATCACAGACCTCAACGAGCAGCTCCAGAA...AGCTCTGTGGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp AAGGTCCCCACACGGGTGATATATGACAGCAGCCTGAGGTCCTGGGGGTTGGGTTCTTTGATGGCCCGCTaGGTTGTCTCCCACATCCGG +
Preference number: 5 (lower is better)
Translates to: KVPTRVIYDSSLRSWGLGSLMAR*VVSHIR
Trigger: CCGGATGTGGGAGACAACCAAGCGGGCCATCAAAGA...ACCCAACCCCCAGGACCTCAGGCTGCTGTCATATATCACCCGTGTGGGGACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp CATGGCTGCCTGCCTGACTGTAGTGCCCACCAACCCAGCCACTGCCACAGAGCTTTGCCCCCTTTCTTCTaGACTTCAAGCTCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: HGCLPDCSAHQPSHCHRALPPFF*TSSSLP
Trigger: AGGCAAGGAGCTTGAAGTCAAGAAGAAAGGGGGCAA...AGCTCTGTGGCAGTGGCTGGGTTGGTGGGCACTACAGTCAGGCAGGCAGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp TGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAAGTCTATCATCCACCTGCTGGTaGAGCGTGCGCTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: CRFPVLSGAVWADCRGSLSSTCW*SVRLRK
Trigger: CTTCCTCAAGCGCACGCTCAACCAGCAGGTGGATGA...TAGACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCTGCAGGGTAATGCCGTaGTTCTCTTTGATGGCCCGC +
Preference number: 5 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLCRVMP*FSLMAR
Trigger: GCGGGCCATCAAAGAGAACAACGGCATTACCCTGCA...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTCTGGGCCGGCTCTCCTaGGGTGGGCCATGGGACTGT +
Preference number: 5 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPLGRLS*GGPWDC
Trigger: ACAGTCCCATGGCCCACCCAAGGAGAGCCGGCCCAG...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS GCA 90 bp GCCAGCTGCGCCTCGAAGGCATCCTTCTCCATCTCTTTGGCTAGCTaGAAGTTCTGGAGCTGCTCGTTGAGGTCTGTGATCTCATCCACC +
Preference number: 5 (lower is better)
Translates to: ASCASKASFSISLAS*KFWSCSLRSVISST
Trigger: GGTGGATGAGATCACAGACCTCAACGAGCAGCTCCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGGATGCCTTCGAGGCGCAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 90 bp ATGGCCCGCTTGGTTGTCTCCCACATCCGGTTCGTGGTCACCTTGTaGAACTCATTGGCCACGAGGTTCACGCGCTGGATGATCTCTTTC +
Preference number: 5 (lower is better)
Translates to: MARLVVSHIRFVVTL*NSLATRFTRWMISF
Trigger: GAAAGAGATCATCCAGCGCGTGAACCTCGTGGCCAATGAGTTCCACAAGGTGACCACGAACCGGATGTGGGAGACAACCAAGCGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 90 bp GAAGTTTTCCCTGTCTGCAGAATGTTCTGTAGGAAGGAGGTGGCCTaGACCAGAGCCGCCTCCAGGCTGGCCCGAACCTTCTGCTCATTA +
Preference number: 5 (lower is better)
Translates to: EVFPVCRMFCRKEVA*TRAASRLARTFCSL
Trigger: TAATGAGCAGAAGGTTCGGGCCAGCCTGGAGGCGGCTCTGGTCCAGGCCACCTCCTTCCTACAGAACATTCTGCAGACAGGGAAAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS GCA 90 bp ACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCCTTGTaGCATGGCTGGAACGTCACGTCAACGTCACTGTCCTCTTCATCG +
Preference number: 5 (lower is better)
Translates to: TVELSMTSSCCSISL*HGWNVTSTSLSSSS
Trigger: CGATGAAGAGGACAGTGACGTTGACGTGACGTTCCAGCCATGGCACAAGGAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373293.5
ENST00000373295.7
ENST00000464092.1
ENST00000496009.5
ENST00000614677.1
CDS GCA 90 bp CAGTGGCCCCAGTACCCACCCTCGTCCAGGAAATTCCAACCTCAGTaGCCATTTCCACGAAGTTTTCCCTGTCTGTGGTGGGATACCCAT +
Preference number: 5 (lower is better)
Translates to: QWPQYPPSSRKFQPQ*PFPRSFPCLWWDTH
Trigger: ATGGGTATCCCACCACAGACAGGGAAAACTTCGTGGAAATGGGCACTGAGGTTGGAATTTCCTGGACGAGGGTGGGTACTGGGGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373293.5
ENST00000464092.1
ENST00000496009.5
CDS-3UTR CAA 90 bp AGGTCTCGTGGCCACAGTGGAGCTGAGCATGACCAGCAGTTGCTGCAGCATCTCTTGCCCCCTTTCTTCTaGACTTCAAGCTCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: RSRGHSGAEHDQQLLQHLLPPFF*TSSSLP
Trigger: AGGCAAGGAGCTTGAAGTCAAGAAGAAAGGGGGCAA...GAGATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGCCACGAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp TGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAAGTCTATGTGAGTCTACCCTTTaGTTGTGCAACTGGGTCGGG +
Preference number: 5 (lower is better)
Translates to: CRFPVLSGAVWADCRGSLCESTL*LCNWVG
Trigger: CCCGACCCAGTTGCACAACAAAAGGGTAGACTCACA...TAGACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS GCA 90 bp TGCAAGTTCTGGAGCTGCTCGTTGAGGTCTGTGATCTCATCCACCTaGTGGTTGAGCGTGCGCTTGAGGAAGGCCACAATCTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: CKFWSCSLRSVISST*WLSVRLRKATISFL
Trigger: CAAGAAGGAGATTGTGGCCTTCCTCAAGCGCACGCTCAACCAGCAGGTGGATGAGATCACAGACCTCAACGAGCAGCTCCAGAACTTGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS GCA 90 bp AGCAGCTCCAGCTGTTTGCACAGATTGTTCTGTCTTCCCTTGAGCTaGTCATTCTCCTGCAGCAGCTTCATGCCTTGCTGGGAGACCCTG +
Preference number: 5 (lower is better)
Translates to: SSSSCLHRLFCLPLS*SFSCSSFMPCWETL
Trigger: CAGGGTCTCCCAGCAAGGCATGAAGCTGCTGCAGGAGAATGAGCAGCTCAAGGGAAGACAGAACAATCTGTGCAAACAGCTGGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 90 bp GCCTCGAAGGCATCCTTCTCCATCTCTTTGGCTAGCTGCAAGTTCTaGAGCTGCTCGTTGAGGTCTGTGATCTCATCCACCTGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: ASKASFSISLASCKF*SCSLRSVISSTCWL
Trigger: CAACCAGCAGGTGGATGAGATCACAGACCTCAACGAGCAGCTCCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGGATGCCTTCGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS-3UTR CAA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTGGGTGGCGAGAGTTGTaGGGCCTCAGTTTCCCTGGT +
Preference number: 5 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRGWREL*GLSFPG
Trigger: ACCAGGGAAACTGAGGCCCAACAACTCTCGCCACCC...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS TCA 90 bp TTTTCCCTGTCTGTGGTGGGATACCCATTCTTCAGTCGGGAAGACTaGGGCCCAAGACCTTTCAGAGCCTCAGAGAAGGAATCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FSLSVVGYPFFSRED*GPRPFRASEKESSS
Trigger: GGAGCTGGATTCCTTCTCTGAGGCTCTGAAAGGTCTTGGGCCTCAGTCTTCCCGACTGAAGAATGGGTATCCCACCACAGACAGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373293.5
ENST00000464092.1
ENST00000496009.5
CDS GCA 90 bp AAGGCATCCTTCTCCATCTCTTTGGCTAGCTGCAAGTTCTGGAGCTaGTCGTTGAGGTCTGTGATCTCATCCACCTGCTGGTTGAGCGTG +
Preference number: 5 (lower is better)
Translates to: KASFSISLASCKFWS*SLRSVISSTCWLSV
Trigger: CACGCTCAACCAGCAGGTGGATGAGATCACAGACCTCAACGAGCAGCTCCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGGATGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS-3UTR CAA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTACCTTGTGGAACTCATaGGCCACGAGGTTCACGCGC +
Preference number: 5 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPTLWNS*ATRFTR
Trigger: GCGCGTGAACCTCGTGGCCAATGAGTTCCACAAGGT...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp TGCCGTTTCCCTGTGCTAAGCGGAGCTGTTTGGGCTGACTGCCGAGGAAGTCTAAGCAGCTCCAGCTGTTaGCACAGATTGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: CRFPVLSGAVWADCRGSLSSSSC*HRLFCL
Trigger: AAGACAGAACAATCTGTGCAAACAGCTGGAGCTGCT...TAGACTTCCTCGGCAGTCAGCCCAAACAGCTCCGCTTAGCACAGGGAAACGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS CCA 90 bp AAGTTCTGGAGCTGCTCGTTGAGGTCTGTGATCTCATCCACCTGCTaGTTGAGCGTGCGCTTGAGGAAGGCCACAATCTCCTTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: KFWSCSLRSVISSTC*LSVRLRKATISFLL
Trigger: TAACAAGAAGGAGATTGTGGCCTTCCTCAAGCGCACGCTCAACCAGCAGGTGGATGAGATCACAGACCTCAACGAGCAGCTCCAGAACTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS-3UTR CAA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTCGGGCTCCAAACTTCTaGAAGCTCCGTTCCTGCACT +
Preference number: 5 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRRAPNF*KLRSCT
Trigger: AGTGCAGGAACGGAGCTTCAAGAAGTTTGGAGCCCG...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTAGCTCCTTGCCTGCCTaGCTCACACTCTTTTTGGGA +
Preference number: 5 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPSSLPA*LTLFLG
Trigger: TCCCAAAAAGAGTGTGAGCAAGGCAGGCAAGGAGCT...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp TTCTTAACTGGTGAGTTCAGTGCTCGACGGGCTCCAAACTTCTTGAAGCTCCGTTTCCTCAGTCTGTCCTaGTCCAGCACCGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: FLTGEFSARRAPNFLKLRFLSLS*SSTDFF
Trigger: GAAGAAGTCGGTGCTGGACAAGGACAGACTGAGGAA...ACGGAGCTTCAAGAAGTTTGGAGCCCGTCGAGCACTGAACTCACCAGTTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS-3UTR CAA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCCGGTTCGTGGTCACCTaGTGGAACTCATTGGCCACG +
Preference number: 5 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSRFVVT*WNSLAT
Trigger: CGTGGCCAATGAGTTCCACAAGGTGACCACGAACCG...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp CTTTTTATACAAATCTCCTCTAGACTGTTCCAGGCTGCCTGCGGATTAAAGTGGCGGTTCGTGGTCACCTaGTGGAACTCATTGGCCACG +
Preference number: 5 (lower is better)
Translates to: LFIQISSRLFQAACGLKWRFVVT*WNSLAT
Trigger: CGTGGCCAATGAGTTCCACAAGGTGACCACGAACCG...CCACTTTAATCCGCAGGCAGCCTGGAACAGTCTAGAGGAGATTTGTATAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000614677.1
CDS-3UTR CAA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCTTCTGGAGCTGCTCGTaGAGGTCTGTGATCTCATCC +
Preference number: 5 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSFWSCS*RSVISS
Trigger: GGATGAGATCACAGACCTCAACGAGCAGCTCCAGAA...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCATGCCGTTGTTCTCTTaGATGGCCCGCTTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSMPLFS*MARLVV
Trigger: GACAACCAAGCGGGCCATCAAAGAGAACAACGGCAT...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp GTGACTGTGACTGGACCAGTCCATTTCTGGAGTAGGTTCTTCTCTCTGTGTCCTAGCAGCTCCAGCTGTTaGCACAGATTGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: VTVTGPVHFWSRFFSLCPSSSSC*HRLFCL
Trigger: AAGACAGAACAATCTGTGCAAACAGCTGGAGCTGCT...AGGACACAGAGAGAAGAACCTACTCCAGAAATGGACTGGTCCAGTCACAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp TCTGTGTCCTACTTGGGACGTAGGGGAACTTCAGGAAGACTAAACTTTTCAAGCTCCAGCAATGTGAACTaGTCCGTGACCTCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SVSYLGRRGTSGRLNFSSSSNVN*SVTSSF
Trigger: GAAAGAGGAGGTCACGGACAAGTTCACATTGCTGGA...GCTTGAAAAGTTTAGTCTTCCTGAAGTTCCCCTACGTCCCAAGTAGGACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS-3UTR CAA 90 bp CTTTTTATACAAATCTCCTCTAGACTGTTCCAGGCTGCCTGCGGATTAAAGTGGTCCTTCTCCATCTCTTaGGCTAGCTGCAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LFIQISSRLFQAACGLKWSFSIS*ASCKFW
Trigger: CCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGGA...CCACTTTAATCCGCAGGCAGCCTGGAACAGTCTAGAGGAGATTTGTATAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000614677.1
CDS CCA 72 bp GAAGTCACTGGCCTGGGTCGTGGGATCGGAAAGAGCTaGGCCAGAGCTTGGCCCCAGCCTGCACCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: EVTGLGRGIGKS*ARAWPQPAPAA
Trigger: GGCGGCGGGTGCAGGCTGGGGCCAAGCTCTGGCCCAGCTCTTTCCGATCCCACGACCCAGGCCAGTGACTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373293.5
CDS GCA 72 bp TCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTaGGTTGGGGCCCACGGGACGCTCTCCTTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: SPLQRCSAFPLL*VGAHGTLSLGG
Trigger: CCCACCCAAGGAGAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373293.5
CDS GCA 72 bp TCCCCACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTaGGTTGGGGCCCACGGGACGCTCAGGGCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: SPLQRCSAFPLL*VGAHGTLRAAV
Trigger: CACAGCAGCCCTGAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461104.2
CDS CCA 72 bp GTTGGGGCCCACGGGACGCTCTCCTTGGGTGGGCCATaGGACTGTGACTCCTGGTGGGGACACGCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: VGAHGTLSLGGP*DCDSWWGHAAF
Trigger: GAAGGCTGCGTGTCCCCACCAGGAGTCACAGTCCCATGGCCCACCCAAGGAGAGCGTCCCGTGGGCCCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373293.5
CDS CCA 72 bp ACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCGTTaGGGCCCACGGGACGCTCAGGGCTGCTGTGTGCCC +
Preference number: 6 (lower is better)
Translates to: TAALLCVSAPLR*GPRDAQGCCVP
Trigger: GGGCACACAGCAGCCCTGAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461104.2
CDS CAA 72 bp CACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCGTaGGGGCCCACGGGACGCTCAGGGCTGCTGTGTGCC +
Preference number: 6 (lower is better)
Translates to: HCSVALRFRSSA*GPTGRSGLLCA
Trigger: GGCACACAGCAGCCCTGAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461104.2
CDS CCA 72 bp ACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCGTTaGGGCCCACGGGACGCTCTCCTTGGGTGGGCCATG +
Preference number: 6 (lower is better)
Translates to: TAALLCVSAPLR*GPRDALLGWAM
Trigger: CATGGCCCACCCAAGGAGAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373293.5
CDS CAA 72 bp CACTGCAGCGTTGCTCTGCGTTTCCGCTCCTCTGCGTaGGGGCCCACGGGACGCTCTCCTTGGGTGGGCCAT +
Preference number: 6 (lower is better)
Translates to: HCSVALRFRSSA*GPTGRSPWVGH
Trigger: ATGGCCCACCCAAGGAGAGCGTCCCGTGGGCCCCAACGCAGAGGAGCGGAAACGCAGAGCAACGCTGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373293.5
CDS CAA 90 bp CCTGCTTCCGCACCAAGGATGATGTTCTCCGTGGTGAGCTGGTCCTaGGTCTCCTGGAACTCGTGGCGCACCTGGGCCAGCTGCGCCTCG +
Preference number: 6 (lower is better)
Translates to: PASAPRMMFSVVSWS*VSWNSWRTWASCAS
Trigger: CGAGGCGCAGCTGGCCCAGGTGCGCCACGAGTTCCAGGAGACCAAGGACCAGCTCACCACGGAGAACATCATCCTTGGTGCGGAAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496009.5
CDS CCA 72 bp AGCTGGTCCTTGGTCTCCTGGAACTCGTGGCGCACCTaGGCCAGCTGCGCCTCGAAGGCATCCTTCTCCATC +
Preference number: 6 (lower is better)
Translates to: SWSLVSWNSWRT*ASCASKASFSI
Trigger: GATGGAGAAGGATGCCTTCGAGGCGCAGCTGGCCCAGGTGCGCCACGAGTTCCAGGAGACCAAGGACCAGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 72 bp CGCGGTGCATCTGCAGAATGTTCTGTAGGAAGGAGGTaGCCTGGACCAGAGCCGCCTCCAGGCTGGCCCGAA +
Preference number: 6 (lower is better)
Translates to: RGASAECSVGRR*PGPEPPPGWPE
Trigger: TTCGGGCCAGCCTGGAGGCGGCTCTGGTCCAGGCCACCTCCTTCCTACAGAACATTCTGCAGATGCACCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373295.7
CDS CAA 72 bp CCCCCAAGGATGATGTTCTCCGTGGTGAGCTGGTCCTaGGTCTCCTGGAACTCGTGGCGCACCTGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: PPRMMFSVVSWS*VSWNSWRTWAS
Trigger: GCTGGCCCAGGTGCGCCACGAGTTCCAGGAGACCAAGGACCAGCTCACCACGGAGAACATCATCCTTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000614677.1
CDS CCA 72 bp CTCGGATCTGGATGTGGTAGAACTCCTTCATCTCCTTaGCCAGAGGCGGCTCCACGGCCACCACCGGCTCCT +
Preference number: 6 (lower is better)
Translates to: LGSGCGRTPSSP*PEAAPRPPPAP
Trigger: AGGAGCCGGTGGTGGCCGTGGAGCCGCCTCTGGCCAAGGAGATGAAGGAGTTCTACCACATCCAGATCCGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 72 bp CTGGCAGGCTCCTCTAGAGAGGGGAAGTCACTGGCCTaGGTCGTGGGATCGGAAAGAGCTGGGCCAGAGCTT +
Preference number: 6 (lower is better)
Translates to: LAGSSREGKSLA*VVGSERAGPEL
Trigger: AAGCTCTGGCCCAGCTCTTTCCGATCCCACGACCCAGGCCAGTGACTTCCCCTCTCTAGAGGAGCCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373293.5
CDS CAA 72 bp GCACCAAGGATGATGTTCTCCGTGGTGAGCTGGTCCTaGGTCTCCTGGAACTCGTGGCGCACCTGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: APRMMFSVVSWS*VSWNSWRTWAS
Trigger: GCTGGCCCAGGTGCGCCACGAGTTCCAGGAGACCAAGGACCAGCTCACCACGGAGAACATCATCCTTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496009.5
CDS GCA 72 bp TTGGTCTCCTGGAACTCGTGGCGCACCTGGGCCAGCTaGGCCTCGAAGGCATCCTTCTCCATCTCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: LVSWNSWRTWAS*ASKASFSISLA
Trigger: AGCCAAAGAGATGGAGAAGGATGCCTTCGAGGCGCAGCTGGCCCAGGTGCGCCACGAGTTCCAGGAGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS GCA 72 bp AGGAGGCGCAGCTCCTCGGCCTCCTTGGTGTCCTGCTaGTGCTCCTGGCACTTCTTAGTCAGCATGAGGATG +
Preference number: 6 (lower is better)
Translates to: RRRSSSASLVSC*CSWHFLVSMRM
Trigger: CATCCTCATGCTGACTAAGAAGTGCCAGGAGCAGCAGCAGGACACCAAGGAGGCCGAGGAGCTGCGCCTCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS GCA 72 bp TGGACCAGAGCCGCCTCCAGGCTGGCCCGAACCTTCTaGTCATTAGCCAGTTCCTGCTGTAGCCGCTGCAAA +
Preference number: 6 (lower is better)
Translates to: WTRAASRLARTF*SLASSCCSRCK
Trigger: TTTGCAGCGGCTACAGCAGGAACTGGCTAATGAGCAGAAGGTTCGGGCCAGCCTGGAGGCGGCTCTGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373293.5
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS GCA 72 bp TTAGCCAGTTCCTGCTGTAGCCGCTGCAAATCCACCTaGTGCTGCTCCAGCTGCAGGCTCAGCTGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: LASSCCSRCKST*CCSSCRLSWSL
Trigger: GAGAGACCAGCTGAGCCTGCAGCTGGAGCAGCAGCAGGTGGATTTGCAGCGGCTACAGCAGGAACTGGCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373293.5
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS GCA 72 bp AGGCTGGCCCGAACCTTCTGCTCATTAGCCAGTTCCTaGTGTAGCCGCTGCAAATCCACCTGCTGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: RLARTFCSLASS*CSRCKSTCCCS
Trigger: GGAGCAGCAGCAGGTGGATTTGCAGCGGCTACAGCAGGAACTGGCTAATGAGCAGAAGGTTCGGGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373293.5
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 72 bp TTTTCCCTGTCTGCAGAATGTTCTGTAGGAAGGAGGTaGCCTGGACCAGAGCCGCCTCCAGGCTGGCCCGAA +
Preference number: 6 (lower is better)
Translates to: FSLSAECSVGRR*PGPEPPPGWPE
Trigger: TTCGGGCCAGCCTGGAGGCGGCTCTGGTCCAGGCCACCTCCTTCCTACAGAACATTCTGCAGACAGGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS CAA 72 bp CGCTTGGTTGTCTCCCACATCCGGTTCGTGGTCACCTaGTGGAACTCATTGGCCACGAGGTTCACGCGCTGG +
Preference number: 6 (lower is better)
Translates to: RLVVSHIRFVVT*WNSLATRFTRW
Trigger: CCAGCGCGTGAACCTCGTGGCCAATGAGTTCCACAAGGTGACCACGAACCGGATGTGGGAGACAACCAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 90 bp GGCGGCTCCACGGCCACCACCGGCTCCTTCTTGCCCCCTTTCTTCTaGACTTCAAGCTCCTTGCCTGCCTTGCTCACACTCTTTTTGGGA +
Preference number: 6 (lower is better)
Translates to: GGSTATTGSFLPPFF*TSSSLPALLTLFLG
Trigger: TCCCAAAAAGAGTGTGAGCAAGGCAGGCAAGGAGCTTGAAGTCAAGAAGAAAGGGGGCAAGAAGGAGCCGGTGGTGGCCGTGGAGCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 90 bp CGCACCTGGGCCAGCTGCGCCTCGAAGGCATCCTTCTCCATCTCTTaGGCTAGCTGCAAGTTCTGGAGCTGCTCGTTGAGGTCTGTGATC +
Preference number: 6 (lower is better)
Translates to: RTWASCASKASFSIS*ASCKFWSCSLRSVI
Trigger: GATCACAGACCTCAACGAGCAGCTCCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGGATGCCTTCGAGGCGCAGCTGGCCCAGGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 90 bp TGCTGGGAGACCCTGGCCATCTGCAGGGTAATGCCGTTGTTCTCTTaGATGGCCCGCTTGGTTGTCTCCCACATCCGGTTCGTGGTCACC +
Preference number: 6 (lower is better)
Translates to: CWETLAICRVMPLFS*MARLVVSHIRFVVT
Trigger: GGTGACCACGAACCGGATGTGGGAGACAACCAAGCGGGCCATCAAAGAGAACAACGGCATTACCCTGCAGATGGCCAGGGTCTCCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS GCA 72 bp TTGAGCTGCTCATTCTCCTGCAGCAGCTTCATGCCTTaGTGGGAGACCCTGGCCATCTGCAGGGTAATGCCG +
Preference number: 6 (lower is better)
Translates to: LSCSFSCSSFMP*WETLAICRVMP
Trigger: CGGCATTACCCTGCAGATGGCCAGGGTCTCCCAGCAAGGCATGAAGCTGCTGCAGGAGAATGAGCAGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 72 bp CTTCAAGCTCCTTGCCTGCCTTGCTCACACTCTTTTTaGGAGCCATGGCTGATGGCAACCAGGGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: LQAPCLPCSHSF*EPWLMATRAPG
Trigger: GCCTGGAGCCCTGGTTGCCATCAGCCATGGCTCCCAAAAAGAGTGTGAGCAAGGCAGGCAAGGAGCTTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000496009.5
CDS CAA 72 bp GCCAGCTGCGCCTCGAAGGCATCCTTCTCCATCTCTTaGGCTAGCTGCAAGTTCTGGAGCTGCTCGTTGAGG +
Preference number: 6 (lower is better)
Translates to: ASCASKASFSIS*ASCKFWSCSLR
Trigger: CCTCAACGAGCAGCTCCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGGATGCCTTCGAGGCGCAGCTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 72 bp TGCTGGGAGACCCTGGCCATCTGCAGGGTAATGCCGTaGTTCTCTTTGATGGCCCGCTTGGTTGTCTCCCAC +
Preference number: 6 (lower is better)
Translates to: CWETLAICRVMP*FSLMARLVVSH
Trigger: GTGGGAGACAACCAAGCGGGCCATCAAAGAGAACAACGGCATTACCCTGCAGATGGCCAGGGTCTCCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 90 bp TTGATGGCCCGCTTGGTTGTCTCCCACATCCGGTTCGTGGTCACCTaGTGGAACTCATTGGCCACGAGGTTCACGCGCTGGATGATCTCT +
Preference number: 6 (lower is better)
Translates to: LMARLVVSHIRFVVT*WNSLATRFTRWMIS
Trigger: AGAGATCATCCAGCGCGTGAACCTCGTGGCCAATGAGTTCCACAAGGTGACCACGAACCGGATGTGGGAGACAACCAAGCGGGCCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS GCA 72 bp TGGAGCTGCTCGTTGAGGTCTGTGATCTCATCCACCTaGTGGTTGAGCGTGCGCTTGAGGAAGGCCACAATC +
Preference number: 6 (lower is better)
Translates to: WSCSLRSVISST*WLSVRLRKATI
Trigger: GATTGTGGCCTTCCTCAAGCGCACGCTCAACCAGCAGGTGGATGAGATCACAGACCTCAACGAGCAGCTCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS GCA 72 bp CTGAGCATGACCAGCAGTTGCTGCAGCATCTCCTTGTaGCATGGCTGGAACGTCACGTCAACGTCACTGTCC +
Preference number: 6 (lower is better)
Translates to: LSMTSSCCSISL*HGWNVTSTSLS
Trigger: GGACAGTGACGTTGACGTGACGTTCCAGCCATGGCACAAGGAGATGCTGCAGCAACTGCTGGTCATGCTCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373293.5
ENST00000373295.7
ENST00000464092.1
ENST00000496009.5
ENST00000614677.1
CDS CCA 72 bp AGCTGCTCGTTGAGGTCTGTGATCTCATCCACCTGCTaGTTGAGCGTGCGCTTGAGGAAGGCCACAATCTCC +
Preference number: 6 (lower is better)
Translates to: SCSLRSVISSTC*LSVRLRKATIS
Trigger: GGAGATTGTGGCCTTCCTCAAGCGCACGCTCAACCAGCAGGTGGATGAGATCACAGACCTCAACGAGCAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 72 bp TTGGTTGTCTCCCACATCCGGTTCGTGGTCACCTTGTaGAACTCATTGGCCACGAGGTTCACGCGCTGGATG +
Preference number: 6 (lower is better)
Translates to: LVVSHIRFVVTL*NSLATRFTRWM
Trigger: CATCCAGCGCGTGAACCTCGTGGCCAATGAGTTCCACAAGGTGACCACGAACCGGATGTGGGAGACAACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 72 bp ACTTCAAGCTCCTTGCCTGCCTTGCTCACACTCTTTTaGGGAGCCATGGCTGATGGCAACCAGGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: TSSSLPALLTLF*GAMADGNQGSR
Trigger: CCTGGAGCCCTGGTTGCCATCAGCCATGGCTCCCAAAAAGAGTGTGAGCAAGGCAGGCAAGGAGCTTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373295.7
ENST00000496009.5
CDS CAA 72 bp ACCCTGGCCATCTGCAGGGTAATGCCGTTGTTCTCTTaGATGGCCCGCTTGGTTGTCTCCCACATCCGGTTC +
Preference number: 6 (lower is better)
Translates to: TLAICRVMPLFS*MARLVVSHIRF
Trigger: GAACCGGATGTGGGAGACAACCAAGCGGGCCATCAAAGAGAACAACGGCATTACCCTGCAGATGGCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 72 bp ACCAGCAGTTGCTGCAGCATCTCCTTGTGCCATGGCTaGAACGTCACGTCAACGTCACTGTCCTCTTCATCG +
Preference number: 6 (lower is better)
Translates to: TSSCCSISLCHG*NVTSTSLSSSS
Trigger: CGATGAAGAGGACAGTGACGTTGACGTGACGTTCCAGCCATGGCACAAGGAGATGCTGCAGCAACTGCTGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373293.5
ENST00000373295.7
ENST00000464092.1
ENST00000496009.5
ENST00000614677.1
CDS CAA 72 bp TCCCACATCCGGTTCGTGGTCACCTTGTGGAACTCATaGGCCACGAGGTTCACGCGCTGGATGATCTCTTTC +
Preference number: 6 (lower is better)
Translates to: SHIRFVVTLWNS*ATRFTRWMISF
Trigger: GAAAGAGATCATCCAGCGCGTGAACCTCGTGGCCAATGAGTTCCACAAGGTGACCACGAACCGGATGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 90 bp ACCTGCTGGTTGAGCGTGCGCTTGAGGAAGGCCACAATCTCCTTCTaGTTATTGGCCAGCTGCTCAAACTCCTGGCGGAACATCTTCTCC +
Preference number: 6 (lower is better)
Translates to: TCWLSVRLRKATISF*LLASCSNSWRNIFS
Trigger: GGAGAAGATGTTCCGCCAGGAGTTTGAGCAGCTGGCCAATAACAAGAAGGAGATTGTGGCCTTCCTCAAGCGCACGCTCAACCAGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 90 bp TCCTTCTCCATCTCTTTGGCTAGCTGCAAGTTCTGGAGCTGCTCGTaGAGGTCTGTGATCTCATCCACCTGCTGGTTGAGCGTGCGCTTG +
Preference number: 6 (lower is better)
Translates to: SFSISLASCKFWSCS*RSVISSTCWLSVRL
Trigger: CAAGCGCACGCTCAACCAGCAGGTGGATGAGATCACAGACCTCAACGAGCAGCTCCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 90 bp TTGGTTGTCTCCCACATCCGGTTCGTGGTCACCTTGTGGAACTCATaGGCCACGAGGTTCACGCGCTGGATGATCTCTTTCCTCAGTCTG +
Preference number: 6 (lower is better)
Translates to: LVVSHIRFVVTLWNS*ATRFTRWMISFLSL
Trigger: CAGACTGAGGAAAGAGATCATCCAGCGCGTGAACCTCGTGGCCAATGAGTTCCACAAGGTGACCACGAACCGGATGTGGGAGACAACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS GCA 72 bp GCCTCGAAGGCATCCTTCTCCATCTCTTTGGCTAGCTaGAAGTTCTGGAGCTGCTCGTTGAGGTCTGTGATC +
Preference number: 6 (lower is better)
Translates to: ASKASFSISLAS*KFWSCSLRSVI
Trigger: GATCACAGACCTCAACGAGCAGCTCCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGGATGCCTTCGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS GCA 72 bp CAGTACCCACCCTCGTCCAGGAAATTCCAACCTCAGTaGCCATTTCCACGAAGTTTTCCCTGTCTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: QYPPSSRKFQPQ*PFPRSFPCLWW
Trigger: CCACCACAGACAGGGAAAACTTCGTGGAAATGGGCACTGAGGTTGGAATTTCCTGGACGAGGGTGGGTACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373293.5
ENST00000464092.1
ENST00000496009.5
CDS CAA 72 bp TTGAGCGTGCGCTTGAGGAAGGCCACAATCTCCTTCTaGTTATTGGCCAGCTGCTCAAACTCCTGGCGGAAC +
Preference number: 6 (lower is better)
Translates to: LSVRLRKATISF*LLASCSNSWRN
Trigger: GTTCCGCCAGGAGTTTGAGCAGCTGGCCAATAACAAGAAGGAGATTGTGGCCTTCCTCAAGCGCACGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 90 bp TGGTTGAGCGTGCGCTTGAGGAAGGCCACAATCTCCTTCTTGTTATaGGCCAGCTGCTCAAACTCCTGGCGGAACATCTTCTCCTGCACA +
Preference number: 6 (lower is better)
Translates to: WLSVRLRKATISFLL*ASCSNSWRNIFSCT
Trigger: TGTGCAGGAGAAGATGTTCCGCCAGGAGTTTGAGCAGCTGGCCAATAACAAGAAGGAGATTGTGGCCTTCCTCAAGCGCACGCTCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 90 bp TCGTTGAGGTCTGTGATCTCATCCACCTGCTGGTTGAGCGTGCGCTaGAGGAAGGCCACAATCTCCTTCTTGTTATTGGCCAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: SLRSVISSTCWLSVR*RKATISFLLLASCS
Trigger: TGAGCAGCTGGCCAATAACAAGAAGGAGATTGTGGCCTTCCTCAAGCGCACGCTCAACCAGCAGGTGGATGAGATCACAGACCTCAACGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS TCA 72 bp TCTGTGGTGGGATACCCATTCTTCAGTCGGGAAGACTaGGGCCCAAGACCTTTCAGAGCCTCAGAGAAGGAA +
Preference number: 6 (lower is better)
Translates to: SVVGYPFFSRED*GPRPFRASEKE
Trigger: TTCCTTCTCTGAGGCTCTGAAAGGTCTTGGGCCTCAGTCTTCCCGACTGAAGAATGGGTATCCCACCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373293.5
ENST00000464092.1
ENST00000496009.5
CDS GCA 72 bp TTCTCCATCTCTTTGGCTAGCTGCAAGTTCTGGAGCTaGTCGTTGAGGTCTGTGATCTCATCCACCTGCTGG +
Preference number: 6 (lower is better)
Translates to: FSISLASCKFWS*SLRSVISSTCW
Trigger: CCAGCAGGTGGATGAGATCACAGACCTCAACGAGCAGCTCCAGAACTTGCAGCTAGCCAAAGAGATGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CCA 72 bp GCATCCTTCTCCATCTCTTTGGCTAGCTGCAAGTTCTaGAGCTGCTCGTTGAGGTCTGTGATCTCATCCACC +
Preference number: 6 (lower is better)
Translates to: ASFSISLASCKF*SCSLRSVISST
Trigger: GGTGGATGAGATCACAGACCTCAACGAGCAGCTCCAGAACTTGCAGCTAGCCAAAGAGATGGAGAAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS CAA 90 bp GCCTCAGAGAAGGAATCCAGCTCCTTTAAGACCTTGGAGGGATCTTaGAAGGCCAGAATCAGCGAAGGACAGACTTTCCAGGAGTCTCTC +
Preference number: 6 (lower is better)
Translates to: ASEKESSSFKTLEGS*KARISEGQTFQESL
Trigger: GAGAGACTCCTGGAAAGTCTGTCCTTCGCTGATTCTGGCCTTCAAAGATCCCTCCAAGGTCTTAAAGGAGCTGGATTCCTTCTCTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373293.5
ENST00000464092.1
ENST00000496009.5
CDS TCA 72 bp GCACCGACTTCTTCTCCAGGTTGTATGCATAGTCCCTaGACTCATTCTCCTGCTTCCGCACCAAGGATGATG +
Preference number: 6 (lower is better)
Translates to: APTSSPGCMHSP*THSPASAPRMM
Trigger: CATCATCCTTGGTGCGGAAGCAGGAGAATGAGTTCAGGGACTATGCATACAACCTGGAGAAGAAGTCGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496009.5
CDS GCA 72 bp AGGAAGGCCACAATCTCCTTCTTGTTATTGGCCAGCTaGTCAAACTCCTGGCGGAACATCTTCTCCTGCACA +
Preference number: 6 (lower is better)
Translates to: RKATISFLLLAS*SNSWRNIFSCT
Trigger: TGTGCAGGAGAAGATGTTCCGCCAGGAGTTTGAGCAGCTGGCCAATAACAAGAAGGAGATTGTGGCCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373295.7
ENST00000496009.5
ENST00000614677.1
CDS GCA 72 bp CAGTACCCACCCTCGTCCAGGAAATTCCAACCTCAGTaGCCATTTCCACGAAGTTTTCCCTGTCTGCAGAAT +
Preference number: 6 (lower is better)
Translates to: QYPPSSRKFQPQ*PFPRSFPCLQN
Trigger: ATTCTGCAGACAGGGAAAACTTCGTGGAAATGGGCACTGAGGTTGGAATTTCCTGGACGAGGGTGGGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614677.1
CDS CAA 90 bp AGACCTTTCAGAGCCTCAGAGAAGGAATCCAGCTCCTTTAAGACCTaGGAGGGATCTTTGAAGGCCAGAATCAGCGAAGGACAGACTTTC +
Preference number: 6 (lower is better)
Translates to: RPFRASEKESSSFKT*EGSLKARISEGQTF
Trigger: GAAAGTCTGTCCTTCGCTGATTCTGGCCTTCAAAGATCCCTCCAAGGTCTTAAAGGAGCTGGATTCCTTCTCTGAGGCTCTGAAAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373293.5
ENST00000464092.1
ENST00000496009.5
CDS CAA 72 bp AAGGAATCCAGCTCCTTTAAGACCTTGGAGGGATCTTaGAAGGCCAGAATCAGCGAAGGACAGACTTTCCAG +
Preference number: 6 (lower is better)
Translates to: KESSSFKTLEGS*KARISEGQTFQ
Trigger: CTGGAAAGTCTGTCCTTCGCTGATTCTGGCCTTCAAAGATCCCTCCAAGGTCTTAAAGGAGCTGGATTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373293.5
ENST00000464092.1
ENST00000496009.5