RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CFAP100 (Homo sapiens)

Ensembl gene IDs: ENSG00000163885

Ensembl transcript IDs: ENST00000352312.6, ENST00000503905.1, ENST00000505024.1, ENST00000506204.1, ENST00000507830.1, ENST00000508140.5, ENST00000510833.5, ENST00000533201.1

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTaGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: RKGAHRRQRGLS*ATRDPAQSLLP
Trigger: AGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
3UTR-3UTR CAA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTCCTCTGCCAACATCTTaGCTAAGCCTTCAGCCAGAA +
Preference number: 3 (lower is better)
Translates to: TQETERTQLGHSRPSPVSPLPTS*LSLQPE
Trigger: TTCTGGCTGAAGGCTTAGCAAAGATGTTGGCAGAGG...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTCGCGGAAGGCGCGCTaGTGCTCGGCCTCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCSRKAR*CSASAR
Trigger: GCGCGCCGAGGCCGAGCATCAGCGCGCCTTCCGCGA...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCTCGCGGAAGGCGCGCTaGTGCTCGGCCTCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPSRKAR*CSASAR
Trigger: GCGCGCCGAGGCCGAGCATCAGCGCGCCTTCCGCGA...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCCTCACCGACCCCGACTaGCCCGGCTCGCTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLLTDPD*PGSLRS
Trigger: GCTTCGGAGCGAGCCGGGGCAGTCGGGGTCGGTGAG...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352312.6
CDS-3UTR GCA 90 bp GACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCCGCGCCCGGGCCCGCTaGAGATGCTCCTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: DREDSVGPLETQPSLCFLRARAR*RCSSCR
Trigger: CCTACAGGAGGAGCATCTGCAGCGGGCCCGGGCGCG...GAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCCGCGCCCGGGCCCGCTaGAGATGCTCCTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: STQETERTQLGHSRPSPVRARAR*RCSSCR
Trigger: CCTACAGGAGGAGCATCTGCAGCGGGCCCGGGCGCG...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGCGGCCCGCTCCAGCCTaGCCTCCTCTTTGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQRPAPA*PPLWSP
Trigger: TGGCGACCAAAGAGGAGGCCAGGCTGGAGCGGGCCG...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCGCACGGTGCCCAGGTTaGCCTCCTGCTGGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCARCPG*PPAGCR
Trigger: CCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGC...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCGCACGGTGCCCAGGTTaGCCTCCTGCTGGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLARCPG*PPAGCR
Trigger: CCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGC...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCTTCTTGATCTCAGCCTaGGCGCGCGCCCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GDREDSVGPLETQPSLCFFLISA*ARARAR
Trigger: GCGGGCCCGGGCGCGCGCCCAGGCTGAGATCAAGAA...GAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTTTCTTGATCTCAGCCTaGGCGCGCGCCCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSFLISA*ARARAR
Trigger: GCGGGCCCGGGCGCGCGCCCAGGCTGAGATCAAGAA...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGGTGGGCTGGGGGTCGTaGGCGGCATACCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQVGWGS*AAYQCP
Trigger: AGGACACTGGTATGCCGCTCACGACCCCCAGCCCAC...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCCCCAGGTTGGCCTCCTaGTGGGTGCCGGTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: DREDSVGPLETQPSLCFLPRLAS*WVPVQC
Trigger: GCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGG...GAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCCCAGGTTGGCCTCCTaGTGGGTGCCGGTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSPRLAS*WVPVQC
Trigger: GCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGG...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCCGGCCCGCTCCAGCCTaGCCTCCTCTTTGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: STQETERTQLGHSRPSPVRPAPA*PPLWSP
Trigger: TGGCGACCAAAGAGGAGGCCAGGCTGGAGCGGGCCG...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTGGACTCGCTGGGCTaGCTGCCTTGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GDREDSVGPLETQPSLCFLDSLG*LPCWGL
Trigger: CAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGTCCAG...GAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCCTGGACTCGCTGGGCTaGCTGCCTTGCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLLDSLG*LPCWGL
Trigger: CAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGTCCAG...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCACCGCTGGACTCGCTaGGCTGGCTGCCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GDREDSVGPLETQPSLCFHRWTR*AGCLAG
Trigger: CCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTG...GAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCCGGCCTGCTCGATCTTaGCCTGGGGCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCRPARS*PGARAP
Trigger: TGGAGCACGTGCCCCAGGTCAAGATCGAGCAGGCCG...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCGTGGGCTGGGGGTCGTaGGCGGCATACCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLVGWGS*AAYQCP
Trigger: AGGACACTGGTATGCCGCTCACGACCCCCAGCCCAC...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTTGCTTGTCCTCCAGCTaGAGCTGCCGCCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSCLSSS*SCRRRL
Trigger: CAGCCTGCGGCGGCAGCTGCAGCTGGAGGACAAGCA...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTACTCGCTGGGCTGGCTaGCTTGCTGGGGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EHTGDREDSVGPLETQPSTRWAG*LAGGCS
Trigger: TGAGCAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGT...ACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTGGCCTCCTGCTGGGTaGCGGTGCAGTGCCGGTACA +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCWPPAG*RCSAGT
Trigger: TGTACCGGCACTGCACCGGCACCCAGCAGGAGGCCA...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGGCCTCCTGCTGGGTaGCGGTGCAGTGCCGGTACA +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLWPPAG*RCSAGT
Trigger: TGTACCGGCACTGCACCGGCACCCAGCAGGAGGCCA...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCGCCTGGCCTCCTCTTTaGTCGCCAGCGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCAWPPL*SPASPA
Trigger: GGCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGC...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCGCCTGGCCTCCTCTTTaGTCGCCAGCGTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GDREDSVGPLETQPSLCFAWPPL*SPASPA
Trigger: GGCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGC...GAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCACACCGCTGGACTCGCTaGGCTGGCTGCCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPHRWTR*AGCLAG
Trigger: CCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTG...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp AGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCGGCCTGCTCGATCTTaGCCTGGGGCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RQRGLSWATRDPAQSLLPRPARS*PGARAP
Trigger: TGGAGCACGTGCCCCAGGTCAAGATCGAGCAGGCCG...AGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTTGCTTGTCCTCCAGCTaGAGCTGCCGCCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TERTQLGHSRPSPVSASSCLSSS*SCRRRL
Trigger: CAGCCTGCGGCGGCAGCTGCAGCTGGAGGACAAGCA...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCCCTGCTGGGTGCCGGTaGAGTGCCGGTACACATCCA +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCPAGCR*SAGTHP
Trigger: TGGATGTGTACCGGCACTGCACCGGCACCCAGCAGG...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCAGCCGCTCTCATaGCCTGCACGGAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQSQPLS*PARSCS
Trigger: ACTGCAGCTCCGTGCAGGCCATGAGAGCGGCTGAGA...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCAGCTCGCCTTGCCCTTaGTCCCTGGTCCTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCSSPCP*SLVLCP
Trigger: GGGACAAAGGACCAGGGATCAAGGGCAAGGCGAGCT...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTGCTGCTGGGGCTCCGTaGAGTACAGCTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSAAGAP*STAVVP
Trigger: AGGAACCACAGCTGTACTTCACGGAGCCCCAGCAGC...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCGGAAGACTCGGGCTTTaGGCTCCAGCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ETERTQLGHSRPSPVSASGRLGL*APAQLL
Trigger: CAGCAGCTGAGCTGGAGCTCAAAGCCCGAGTCTTCC...GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCGGAAGACTCGGGCTTTaGGCTCCAGCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DREDSVGPLETQPSLCFLGRLGL*APAQLL
Trigger: CAGCAGCTGAGCTGGAGCTCAAAGCCCGAGTCTTCC...GAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTGCCTCTCTTCTTCTTaGTCTCAGCCTGGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCCLSSS*SQPGRA
Trigger: CGCGCGCCCAGGCTGAGATCAAGAAGAAGAGAGGCA...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGTGCCTCTCTTCTTCTTaGTCTCAGCCTGGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLCLSSS*SQPGRA
Trigger: CGCGCGCCCAGGCTGAGATCAAGAAGAAGAGAGGCA...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGGCTCAGACTGTTGTTTaGTCCTGTGGGCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQAQTVV*SCGLGV
Trigger: GACCCCCAGCCCACAGGATCAAACAACAGTCTGAGC...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCACCGAAGCCTCCGCGCTaGAGTTCTCAGCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPPKPPR*SSQLQE
Trigger: CTCCTGGAGCTGAGAACTGCAGCGCGGAGGCTTCGG...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352312.6
CDS-3UTR GCA 90 bp GGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCGCATCGTCTTCTGCTaGTGCCGTTCGGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GDREDSVGPLETQPSLCFRIVFC*CRSERA
Trigger: GGCTCTCTCCGAACGGCAGCAGCAGAAGACGATGCG...GAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGACCCGCATCGTCTTCTaGTGCTGCCGTTCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQTRIVF*CCRSER
Trigger: TCTCTCCGAACGGCAGCAGCAGAAGACGATGCGGGT...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCCGCCGCAGGCTGGTGTaGTTAGCCGACACTTTCGAG +
Preference number: 4 (lower is better)
Translates to: ETERTQLGHSRPSPVSASRRRLV*LADTFE
Trigger: CTCGAAAGTGTCGGCTAAGCACACCAGCCTGCGGCG...GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCGCCGCAGGCTGGTGTaGTTAGCCGACACTTTCGAG +
Preference number: 4 (lower is better)
Translates to: EHTGDREDSVGPLETQPSRRRLV*LADTFE
Trigger: CTCGAAAGTGTCGGCTAAGCACACCAGCCTGCGGCG...ACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTGCCGCTCTCATGGCCTaGACGGAGCTGCAGTCATTC +
Preference number: 4 (lower is better)
Translates to: EHTGDREDSVGPLETQPSAALMA*TELQSF
Trigger: GAATGACTGCAGCTCCGTGCAGGCCATGAGAGCGGC...ACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCCCCAGCCGCATCGTCTaGAGAAACCTCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: STQETERTQLGHSRPSPVPSRIV*RNLQGF
Trigger: GAAGCCCTGGAGGTTTCTGCAGACGATGCGGCTGGG...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCCCCAGCCGCATCGTCTaGAGAAACCTCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCPSRIV*RNLQGF
Trigger: GAAGCCCTGGAGGTTTCTGCAGACGATGCGGCTGGG...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTTGGGTGCCGGTGCAGTaGCGGTACACATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: TQETERTQLGHSRPSPVSWVPVQ*RYTSST
Trigger: GGTGCTGGATGTGTACCGGCACTGCACCGGCACCCA...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCATGGGTGCCGGTGCAGTaGCGGTACACATCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPWVPVQ*RYTSST
Trigger: GGTGCTGGATGTGTACCGGCACTGCACCGGCACCCA...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp AGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCCTGCTGGGTGCCGGTaGAGTGCCGGTACACATCCA +
Preference number: 4 (lower is better)
Translates to: RQRGLSWATRDPAQSLLPPAGCR*SAGTHP
Trigger: TGGATGTGTACCGGCACTGCACCGGCACCCAGCAGG...AGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTTCAGCATCTGCACGGTaGCCAGGTTGGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSSASAR*PGWPPA
Trigger: AGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGA...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCTCAGCATCTGCACGGTaGCCAGGTTGGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPSASAR*PGWPPA
Trigger: AGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGA...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTTTGCCCTCTCGGCCTaGTCGATCTTGACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DREDSVGPLETQPSLCFLFALSA*SILTWG
Trigger: GCCCCAGGTCAAGATCGAGCAGGCCGAGAGGGCAAA...GAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCCCGCTCCTTCTCCTTTaGCCTCTCGGCCTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: STQETERTQLGHSRPSPVPLLLL*PLGLLD
Trigger: ATCGAGCAGGCCGAGAGGGCAAAGGAGAAGGAGCGG...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTTCTCAGCCGCTCTCATaGCCTGCACGGAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSSQPLS*PARSCS
Trigger: ACTGCAGCTCCGTGCAGGCCATGAGAGCGGCTGAGA...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCCAGAGAGGACTCAGTTaGGCCACTCGAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLQRGLS*ATRDPA
Trigger: GGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTG...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCCAGAGAGGACTCAGTTaGGCCACTCGAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: ETERTQLGHSRPSPVSASQRGLS*ATRDPA
Trigger: GGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTG...GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
3UTR CAA 72 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTaGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQ*GHSRPSPVSAS
Trigger: GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGGGATCTCTCTCCGCTTaGCATCCAGGGCATACTGGA +
Preference number: 4 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQGSLSA*HPGHTG
Trigger: TCCAGTATGCCCTGGATGTCAAGCGGAGAGAGATCC...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp AGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTAGCTCGCCTTGCCCTTaGTCCCTGGTCCTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: RQRGLSWATRDPAQSLLPSSPCP*SLVLCP
Trigger: GGGACAAAGGACCAGGGATCAAGGGCAAGGCGAGCT...AGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTGCTGGGGCTCCGTaGAGTACAGCTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: TQETERTQLGHSRPSPVSAAGAP*STAVVP
Trigger: AGGAACCACAGCTGTACTTCACGGAGCCCCAGCAGC...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCACTGCTTCAGCTGGTTaGCCTCCCTGTCCATGCGGA +
Preference number: 4 (lower is better)
Translates to: GDREDSVGPLETQPSLCFTASAG*PPCPCG
Trigger: TCCGCATGGACAGGGAGGTCAACCAGCTGAAGCAGT...GAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCACTGCTTCAGCTGGTTaGCCTCCCTGTCCATGCGGA +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLTASAG*PPCPCG
Trigger: TCCGCATGGACAGGGAGGTCAACCAGCTGAAGCAGT...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTAGCAGCTTATCCTGCTaGTCGCCCTTGTACTCGCCG +
Preference number: 4 (lower is better)
Translates to: EHTGDREDSVGPLETQPSSSLSC*SPLYSP
Trigger: CGGCGAGTACAAGGGCGATCAGCAGGATAAGCTGCT...ACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCCCAGCTGGTGCTCAATaGTGGTCAGCATCTGCACGG +
Preference number: 4 (lower is better)
Translates to: ETERTQLGHSRPSPVSASPAGAQ*WSASAR
Trigger: CCGTGCAGATGCTGACCATCATTGAGCACCAGCTGG...GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCCAGCTGGTGCTCAATaGTGGTCAGCATCTGCACGG +
Preference number: 4 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSPAGAQ*WSASAR
Trigger: CCGTGCAGATGCTGACCATCATTGAGCACCAGCTGG...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCGCTCAGACTGTTGTTTaGTCCTGTGGGCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPAQTVV*SCGLGV
Trigger: GACCCCCAGCCCACAGGATCAAACAACAGTCTGAGC...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTCGCATCGTCTTCTGCTaGTGCCGTTCGGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TQETERTQLGHSRPSPVSRIVFC*CRSERA
Trigger: GGCTCTCTCCGAACGGCAGCAGCAGAAGACGATGCG...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTGCCGCTCTCATGGCCTaGACGGAGCTGCAGTCATTC +
Preference number: 4 (lower is better)
Translates to: TERTQLGHSRPSPVSASSAALMA*TELQSF
Trigger: GAATGACTGCAGCTCCGTGCAGGCCATGAGAGCGGC...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCGAGCTCCAGCTCAGCTaGTGTGTCCTCCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: STQETERTQLGHSRPSPVELQLS*CVLLLG
Trigger: ACCAAGGAGGAGGACACAGCAGCTGAGCTGGAGCTC...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCGAGCTCCAGCTCAGCTaGTGTGTCCTCCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPELQLS*CVLLLG
Trigger: ACCAAGGAGGAGGACACAGCAGCTGAGCTGGAGCTC...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTATGATGGTCAGCATCTaGACGGTGCCCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EHTGDREDSVGPLETQPSMMVSI*TVPRLA
Trigger: GGCCAACCTGGGCACCGTGCAGATGCTGACCATCAT...ACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTGACCTGGGGCACGTaGTCCAGGTTCTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCLTWGT*SRFSSS
Trigger: GCTGCTAGAGAACCTGGAGCACGTGCCCCAGGTCAA...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCTTGACCTGGGGCACGTaGTCCAGGTTCTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GDREDSVGPLETQPSLCFLTWGT*SRFSSS
Trigger: GCTGCTAGAGAACCTGGAGCACGTGCCCCAGGTCAA...GAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTTTTGCCCTCTCGGCCTaGTCGATCTTGACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TERTQLGHSRPSPVSASSFALSA*SILTWG
Trigger: GCCCCAGGTCAAGATCGAGCAGGCCGAGAGGGCAAA...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTCCGCTCCTTCTCCTTTaGCCTCTCGGCCTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: TQETERTQLGHSRPSPVSPLLLL*PLGLLD
Trigger: ATCGAGCAGGCCGAGAGGGCAAAGGAGAAGGAGCGG...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCGGGCCCGCTGCAGATaGTCCTCCTGTAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSRARCR*SSCRIF
Trigger: AAAGATCCTACAGGAGGAGCATCTGCAGCGGGCCCG...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCCGGGCCCGCTGCAGATaGTCCTCCTGTAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPRARCR*SSCRIF
Trigger: AAAGATCCTACAGGAGGAGCATCTGCAGCGGGCCCG...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTACCCTGACCCTCTTTaGCCCACATGGAGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCYPDPL*PTWSSP
Trigger: AGGCGAGCTCCATGTGGGCCAAAGAGGGTCAGGGTA...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCTACCCTGACCCTCTTTaGCCCACATGGAGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPYPDPL*PTWSSP
Trigger: AGGCGAGCTCCATGTGGGCCAAAGAGGGTCAGGGTA...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGCGTGAAGTACAGCTGTaGTTCCTCCCCATCGCTGTC +
Preference number: 4 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQREVQL*FLPIAV
Trigger: GACAGCGATGGGGAGGAACCACAGCTGTACTTCACG...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCACATCCAGGAGCTGCTaGGGCTCCGTGAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPTSRSC*GSVKYS
Trigger: GCTGTACTTCACGGAGCCCCAGCAGCTCCTGGATGT...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCACATCCAGGAGCTGCTaGGGCTCCGTGAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCTSRSC*GSVKYS
Trigger: GCTGTACTTCACGGAGCCCCAGCAGCTCCTGGATGT...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTGCTCGATCTTGACCTaGGGCACGTGCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: ETERTQLGHSRPSPVSASCSILT*GTCSRF
Trigger: GAACCTGGAGCACGTGCCCCAGGTCAAGATCGAGCA...GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTGCTCGATCTTGACCTaGGGCACGTGCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: STQETERTQLGHSRPSPVCSILT*GTCSRF
Trigger: GAACCTGGAGCACGTGCCCCAGGTCAAGATCGAGCA...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTGTTGTTTGATCCTGTaGGCTGGGGGTCGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: ETERTQLGHSRPSPVSASCCLIL*AGGRER
Trigger: CCGCTCACGACCCCCAGCCCACAGGATCAAACAACA...GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCGTGGAAAGGGTTCGCTaGAGGGTCAGGACCATGTTC +
Preference number: 4 (lower is better)
Translates to: ETERTQLGHSRPSPVSASVERVR*RVRTMF
Trigger: GAACATGGTCCTGACCCTTCAGCGAACCCTTTCCAC...GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCGGATCTCTCTCCGCTTaGCATCCAGGGCATACTGGA +
Preference number: 4 (lower is better)
Translates to: STQETERTQLGHSRPSPVGSLSA*HPGHTG
Trigger: TCCAGTATGCCCTGGATGTCAAGCGGAGAGAGATCC...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGGGCTTCTTTGTACCCTaGCCCTCTTTGGCCCACATG +
Preference number: 4 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLGFFVP*PSLAHM
Trigger: CATGTGGGCCAAAGAGGGTCAGGGTACAAAGAAGCC...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAAGCAGCTTATCCTGCTaGTCGCCCTTGTACTCGCCG +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPSSLSC*SPLYSP
Trigger: CGGCGAGTACAAGGGCGATCAGCAGGATAAGCTGCT...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCAAGACATCCAGGAGCTaGTGGGGCTCCGTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLKTSRS*WGSVKY
Trigger: GTACTTCACGGAGCCCCAGCAGCTCCTGGATGTCTT...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGATCAGCGACAGGTTCTaGTCCTCCAGCTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLISDRF*SSSSRK
Trigger: CTTCCGAGAGCTGGAGGAGCAGAACCTGTCGCTGAT...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCATCAGCGACAGGTTCTaGTCCTCCAGCTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: ETERTQLGHSRPSPVSASISDRF*SSSSRK
Trigger: CTTCCGAGAGCTGGAGGAGCAGAACCTGTCGCTGAT...GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTATGATGGTCAGCATCTaGACGGTGCCCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TQETERTQLGHSRPSPVSMMVSI*TVPRLA
Trigger: GGCCAACCTGGGCACCGTGCAGATGCTGACCATCAT...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTAGCGTCTCCAGCCGCTaGATCTCTCTCCGCTTGACA +
Preference number: 4 (lower is better)
Translates to: TERTQLGHSRPSPVSASSSVSSR*ISLRLT
Trigger: TGTCAAGCGGAGAGAGATCCAGCGGCTGGAGACGCT...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCCTTGCCCTTGATCCCTaGTCCTTTGTCCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: DREDSVGPLETQPSLCFLLALDP*SFVPWC
Trigger: ACACCAGGGGACAAAGGACCAGGGATCAAGGGCAAG...GAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCGTGAAGTACAGCTGTaGTTCCTCCCCATCGCTGTC +
Preference number: 4 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLREVQL*FLPIAV
Trigger: GACAGCGATGGGGAGGAACCACAGCTGTACTTCACG...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTGTCTCCTGGCTGTTCTaGATCAGCGACAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSVSWLF*ISDRFC
Trigger: GCAGAACCTGTCGCTGATCCAGAACAGCCAGGAGAC...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCGTCTTCTCCGTCTCCTaGCTGTTCTGGATCAGCGAC +
Preference number: 4 (lower is better)
Translates to: STQETERTQLGHSRPSPVVFSVS*LFWISD
Trigger: GTCGCTGATCCAGAACAGCCAGGAGACGGAGAAGAC...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGTCCATGCGGATCTaGGTGTGTTTCAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSLSMRI*VCFRVW
Trigger: CCACACCCTGAAACACACCCAGATCCGCATGGACAG...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTGTCCATGCGGATCTaGGTGTGTTTCAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: EHTGDREDSVGPLETQPSLSMRI*VCFRVW
Trigger: CCACACCCTGAAACACACCCAGATCCGCATGGACAG...ACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCACCCACTGCTTCAGCTaGTTGACCTCCCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPTHCFS*LTSLSM
Trigger: CATGGACAGGGAGGTCAACCAGCTGAAGCAGTGGGT...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCACCCACTGCTTCAGCTaGTTGACCTCCCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: DREDSVGPLETQPSLCFLTHCFS*LTSLSM
Trigger: CATGGACAGGGAGGTCAACCAGCTGAAGCAGTGGGT...GAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCATGTTGTTTGATCCTGTaGGCTGGGGGTCGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPCCLIL*AGGRER
Trigger: CCGCTCACGACCCCCAGCCCACAGGATCAAACAACA...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGTGCAGTCATTCTCCCTaGCGAACTCGTCGAACAAGG +
Preference number: 4 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLCSHSP*RTRRTR
Trigger: CCTTGTTCGACGAGTTCGTCAGGGAGAATGACTGCA...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTGCAGTCATTCTCCCTaGCGAACTCGTCGAACAAGG +
Preference number: 4 (lower is better)
Translates to: STQETERTQLGHSRPSPVCSHSP*RTRRTR
Trigger: CCTTGTTCGACGAGTTCGTCAGGGAGAATGACTGCA...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGGCTTCTTTGTACCCTaGCCCTCTTTGGCCCACATG +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPGFFVP*PSLAHM
Trigger: CATGTGGGCCAAAGAGGGTCAGGGTACAAAGAAGCC...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTGTCCTCCTCCTTGGTaGTGGACATCATCATTGTGG +
Preference number: 4 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQCPPPW*WTSSLW
Trigger: CCACAATGATGATGTCCATCACCAAGGAGGAGGACA...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAAAGACATCCAGGAGCTaGTGGGGCTCCGTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPKTSRS*WGSVKY
Trigger: GTACTTCACGGAGCCCCAGCAGCTCCTGGATGTCTT...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGAGCTCATCCAGCTGGTaGTCAATGATGGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQSSSSW*SMMVSI
Trigger: GATGCTGACCATCATTGAGCACCAGCTGGATGAGCT...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGACATCCAGGGCATACTaGAGGAGGAACATTTGCCGC +
Preference number: 4 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLTSRAY*RRNICR
Trigger: GCGGCAAATGTTCCTCCTCCAGTATGCCCTGGATGT...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTATCTTGGCTTTaGTCTCCTTCTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQSLSWL*SPSQPL
Trigger: GAGCGGCTGAGAAGGAGACCAAAGCCAAGATAGAGA...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTGGTCCTTTGTCCCCTaGTGTGGAGTTAACACTGCT +
Preference number: 4 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQWSFVP*CGVNTA
Trigger: AGCAGTGTTAACTCCACACCAGGGGACAAAGGACCA...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTCTTGCCCTTGATCCCTaGTCCTTTGTCCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TQETERTQLGHSRPSPVSLALDP*SFVPWC
Trigger: ACACCAGGGGACAAAGGACCAGGGATCAAGGGCAAG...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTGTCTCCTGGCTGTTCTaGATCAGCGACAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TERTQLGHSRPSPVSASSVSWLF*ISDRFC
Trigger: GCAGAACCTGTCGCTGATCCAGAACAGCCAGGAGAC...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGTCTTCTCCGTCTCCTaGCTGTTCTGGATCAGCGAC +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPVFSVS*LFWISD
Trigger: GTCGCTGATCCAGAACAGCCAGGAGACGGAGAAGAC...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGTTGTACTCGCCGAAGTaGAAGACTCGGGCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLLYSPK*KTRALS
Trigger: GCTCAAAGCCCGAGTCTTCCACTTCGGCGAGTACAA...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGAGCAGCTCATCCAGCTaGTGCTCAATGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLSSSSS*CSMMVS
Trigger: GCTGACCATCATTGAGCACCAGCTGGATGAGCTGCT...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCACATCATCATTGTGGTaGCCCACTGCTTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ETERTQLGHSRPSPVSASTSSLW*PTASAG
Trigger: ACCAGCTGAAGCAGTGGGTCACCACAATGATGATGT...GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCACATCATCATTGTGGTaGCCCACTGCTTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPTSSLW*PTASAG
Trigger: ACCAGCTGAAGCAGTGGGTCACCACAATGATGATGT...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp AGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTATTGTGGTGACCCACTaGTTCAGCTGGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: RQRGLSWATRDPAQSLLPIVVTH*FSWLTS
Trigger: GGAGGTCAACCAGCTGAAGCAGTGGGTCACCACAAT...AGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTATTGTGGTGACCCACTaGTTCAGCTGGTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: TQETERTQLGHSRPSPVSIVVTH*FSWLTS
Trigger: GGAGGTCAACCAGCTGAAGCAGTGGGTCACCACAAT...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCACACATCCAGCACCTTaGAGTTCAGGCTCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: DREDSVGPLETQPSLCFLTHPAP*SSGSLA
Trigger: TGCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGT...GAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTACACATCCAGCACCTTaGAGTTCAGGCTCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: EHTGDREDSVGPLETQPSTHPAP*SSGSLA
Trigger: TGCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGT...ACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCAGCTCATCCAGCTGGTaGTCAATGATGGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLSSSSW*SMMVSI
Trigger: GATGCTGACCATCATTGAGCACCAGCTGGATGAGCT...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAACCCAGCCCAGTCTCTaGTTCCTCTGCCAACATCTT +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPTQPSL*FLCQHL
Trigger: AAGATGTTGGCAGAGGAAGCAGAGACTGGGCTGGGT...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTACCCAGCCCAGTCTCTaGTTCCTCTGCCAACATCTT +
Preference number: 4 (lower is better)
Translates to: TQETERTQLGHSRPSPVSTQPSL*FLCQHL
Trigger: AAGATGTTGGCAGAGGAAGCAGAGACTGGGCTGGGT...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCGTATCTCAGACATCTTaGCTGAGGCCCAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: STQETERTQLGHSRPSPVVSQTS*LRPKRL
Trigger: CAACCTCTTGGGCCTCAGCCAAGATGTCTGAGATAC...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp AGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTACATCCAGGGCATACTaGAGGAGGAACATTTGCCGC +
Preference number: 4 (lower is better)
Translates to: RQRGLSWATRDPAQSLLPTSRAY*RRNICR
Trigger: GCGGCAAATGTTCCTCCTCCAGTATGCCCTGGATGT...AGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCTCTCTATCTTGGCTTTaGTCTCCTTCTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPSLSWL*SPSQPL
Trigger: GAGCGGCTGAGAAGGAGACCAAAGCCAAGATAGAGA...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCAAGCCACTCCTTaGGCGACAGCTTGTATAGGA +
Preference number: 4 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLLQATP*ATACIG
Trigger: TCCTATACAAGCTGTCGCCCAAGGAGTGGCTTGAAG...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCCTTCAAGCCACTCCTTaGGCGACAGCTTGTATAGGA +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCLQATP*ATACIG
Trigger: TCCTATACAAGCTGTCGCCCAAGGAGTGGCTTGAAG...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp GGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCTGGTCCTTTGTCCCCTaGTGTGGAGTTAACACTGCT +
Preference number: 4 (lower is better)
Translates to: GDREDSVGPLETQPSLCFWSFVP*CGVNTA
Trigger: AGCAGTGTTAACTCCACACCAGGGGACAAAGGACCA...GAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTTTGTACTCGCCGAAGTaGAAGACTCGGGCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: TERTQLGHSRPSPVSASSLYSPK*KTRALS
Trigger: GCTCAAAGCCCGAGTCTTCCACTTCGGCGAGTACAA...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTAGCAGCTCATCCAGCTaGTGCTCAATGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TERTQLGHSRPSPVSASSSSSSS*CSMMVS
Trigger: GCTGACCATCATTGAGCACCAGCTGGATGAGCTGCT...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCCGCTCCTGATCTCTaGGCAAGAAGAAATCCACAT +
Preference number: 4 (lower is better)
Translates to: STQETERTQLGHSRPSPVSAPDL*ARRNPH
Trigger: ATGTGGATTTCTTCTTGCTCAGAGATCAGGAGCGGA...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCGCCTTATTCCGCTCCTaGTCTCTGAGCAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLALFRS*SLSKKK
Trigger: TTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGC...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCGCCTTATTCCGCTCCTaGTCTCTGAGCAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCALFRS*SLSKKK
Trigger: TTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGC...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTGTATCTCAGACATCTTaGCTGAGGCCCAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TERTQLGHSRPSPVSASSVSQTS*LRPKRL
Trigger: CAACCTCTTGGGCCTCAGCCAAGATGTCTGAGATAC...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTTGCTTGAAGAAGAGCTaGTGTTCATGGATTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TQETERTQLGHSRPSPVSCLKKS*CSWIPG
Trigger: GCCTGGAATCCATGAACATCAGCTCTTCTTCAAGCA...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCATGCTTGAAGAAGAGCTaGTGTTCATGGATTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPCLKKS*CSWIPG
Trigger: GCCTGGAATCCATGAACATCAGCTCTTCTTCAAGCA...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCATGAATTTATTCAGGTaGGGAAGGGAGCACACAGGA +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLMNLFR*GREHTG
Trigger: TCCTGTGTGCTCCCTTCCTCACCTGAATAAATTCAT...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352312.6
CDS-3UTR CCA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGTTGATATTAACAATCTaGGTGGTGAGGTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLLILTI*VVRSRI
Trigger: GATCCGGGACCTCACCACCCAGATTGTTAATATCAA...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCGTTCTCTTCAGTGCTTaGAGAAGAGCTGATGTTCAT +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPVLFSA*RRADVH
Trigger: ATGAACATCAGCTCTTCTTCAAGCACTGAAGAGAAC...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTGTCCATCAGTGTGTaGTCAGACTGTTGTTTGATC +
Preference number: 4 (lower is better)
Translates to: TGDREDSVGPLETQPSLCLSISV*SDCCLI
Trigger: GATCAAACAACAGTCTGAGCACACACTGATGGACAA...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCCTCCACATTCTTTTCTaGTTTGGTCAAGGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: EEGSTQETERTQLGHSRPLHILF*FGQGEL
Trigger: AAGCTCACCTTGACCAAAGCAGAAAAGAATGTGGAG...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505024.1
CDS-3UTR CCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCATTGATATTAACAATCTaGGTGGTGAGGTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPLILTI*VVRSRI
Trigger: GATCCGGGACCTCACCACCCAGATTGTTAATATCAA...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCAGGATCTTTTGCATCTaGAGCTTCTCTTCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: HTGDREDSVGPLETQPSLRIFCI*SFSSRS
Trigger: ACTTCGAGAAGAGAAGCTCCAGATGCAAAAGATCCT...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR TCA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGTTCTCTTCAGTGCTTaGAGAAGAGCTGATGTTCAT +
Preference number: 4 (lower is better)
Translates to: TQETERTQLGHSRPSPVSVLFSA*RRADVH
Trigger: ATGAACATCAGCTCTTCTTCAAGCACTGAAGAGAAC...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR GCA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTTTGTCCATCAGTGTGTaGTCAGACTGTTGTTTGATC +
Preference number: 4 (lower is better)
Translates to: TERTQLGHSRPSPVSASSLSISV*SDCCLI
Trigger: GATCAAACAACAGTCTGAGCACACACTGATGGACAA...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CCA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAAGGATCTTTTGCATCTaGAGCTTCTCTTCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPRIFCI*SFSSRS
Trigger: ACTTCGAGAAGAGAAGCTCCAGATGCAAAAGATCCT...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 90 bp CAGCTCACCCTCTGGAGTCGCCACCGCTGGACTCGCTGGGCTGGCTaGCTTGCTGGGGGCTGCTCAGGTAAGACGGGCTCCGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: QLTLWSRHRWTRWAG*LAGGCSGKTGSAPA
Trigger: GGCTGGGGCGGAGCCCGTCTTACCTGAGCAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTGGCGACTCCAGAGGGTGAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507830.1
CDS GCA 90 bp AGTTCGACCCTCTGGAGTCGCCACCGCTGGACTCGCTGGGCTGGCTaGCTTGCTGGGGGCTGCTCAGGTAAGACGGGCTCCGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: SSTLWSRHRWTRWAG*LAGGCSGKTGSAPA
Trigger: GGCTGGGGCGGAGCCCGTCTTACCTGAGCAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTGGCGACTCCAGAGGGTCGAACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 90 bp AGTCGCCACCGCTGGACTCGCTGGGCTGGCTGCCTTGCTGGGGGCTaGTCAGGTAAGACGGGCTCCGCCCCAGCCGCATCGTCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: SRHRWTRWAGCLAGG*SGKTGSAPAASSAE
Trigger: TTCTGCAGACGATGCGGCTGGGGCGGAGCCCGTCTTACCTGAGCAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTGGCGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000507830.1
CDS CCA 90 bp GCTTGCCCTCAGCTCACCCTCTGGAGTCGCCACCGCTGGACTCGCTaGGCTGGCTGCCTTGCTGGGGGCTGCTCAGGTAAGACGGGCTCC +
Preference number: 5 (lower is better)
Translates to: ACPQLTLWSRHRWTR*AGCLAGGCSGKTGS
Trigger: GGAGCCCGTCTTACCTGAGCAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTGGCGACTCCAGAGGGTGAGCTGAGGGCAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507830.1
CDS CCA 90 bp ACAAGGCGGCGTCCTTCTCCAGGGATTTCTCGGCCCGCTCCAGCCTaGCCTCCTCTTTGGTCGCCAGCGTCTCCAGCCGCTGGATCTCTC +
Preference number: 5 (lower is better)
Translates to: TRRRPSPGISRPAPA*PPLWSPASPAAGSL
Trigger: GAGAGATCCAGCGGCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGCTGGAGCGGGCCGAGAAATCCCTGGAGAAGGACGCCGCCTTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTGCACGGTGCCCAGGTaGGCCTCCTGCTGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: DREDSVGPLETQPSLCFLCTVPR*ASCWVP
Trigger: CGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCA...GAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTTGCACGGTGCCCAGGTaGGCCTCCTGCTGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: EHTGDREDSVGPLETQPSCTVPR*ASCWVP
Trigger: CGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCA...ACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 90 bp ATCTGCACGGTGCCCAGGTTGGCCTCCTGCTGGGTGCCGGTGCAGTaGCGGTACACATCCAGCACCTTGCAGTTCAGGCTCTCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: ICTVPRLASCWVPVQ*RYTSSTLQFRLSSS
Trigger: GCTGCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS GCA 90 bp GGCAGGTCTGCAGAGGAGCCTTCCACCGGCTGCTGGCCACTGCTTTaGGTCCACGCCCAGGTGACTACCGGGACCATGGAAGGTAGTGTT +
Preference number: 5 (lower is better)
Translates to: GRSAEEPSTGCWPLL*VHAQVTTGTMEGSV
Trigger: AACACTACCTTCCATGGTCCCGGTAGTCACCTGGGCGTGGACGCAAAGCAGTGGCCAGCAGCCGGTGGAAGGCTCCTCTGCAGACCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503905.1
CDS CCA 90 bp CGCTCCAGCCTGGCCTCCTCTTTGGTCGCCAGCGTCTCCAGCCGCTaGATCTCTCTCCGCTTGACATCCAGGGCATACTGGAGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: RSSLASSLVASVSSR*ISLRLTSRAYWRRN
Trigger: GTTCCTCCTCCAGTATGCCCTGGATGTCAAGCGGAGAGAGATCCAGCGGCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGCTGGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000503905.1
ENST00000505024.1
CDS-3UTR CAA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCTGGCCTCCTCTTaGGTCGCCAGCGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: EEGSTQETERTQLGHSRPSLASS*VASVSS
Trigger: GCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGCT...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTAGCCTGGCCTCCTCTTaGGTCGCCAGCGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSSLASS*VASVSS
Trigger: GCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGCT...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTCGGCCTGCTCGATCTaGACCTGGGGCACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: DREDSVGPLETQPSLCFLSACSI*TWGTCS
Trigger: GGAGCACGTGCCCCAGGTCAAGATCGAGCAGGCCGA...GAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 90 bp TCAGCATCTGCACGGTGCCCAGGTTGGCCTCCTGCTGGGTGCCGGTaGAGTGCCGGTACACATCCAGCACCTTGCAGTTCAGGCTCTCTA +
Preference number: 5 (lower is better)
Translates to: SASARCPGWPPAGCR*SAGTHPAPCSSGSL
Trigger: TAGAGAGCCTGAACTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS GCA 90 bp TGCTCAATGATGGTCAGCATCTGCACGGTGCCCAGGTTGGCCTCCTaGTGGGTGCCGGTGCAGTGCCGGTACACATCCAGCACCTTGCAG +
Preference number: 5 (lower is better)
Translates to: CSMMVSICTVPRLAS*WVPVQCRYTSSTLQ
Trigger: CTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGACCATCATTGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS GCA 90 bp GCGCGCGCCCGGGCCCGCTGCAGATGCTCCTCCTGTAGGATCTTTTaGATCTGGAGCTTCTCTTCTCGAAGTCTGATGCGCCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ARARARCRCSSCRIF*IWSFSSRSLMRRSF
Trigger: GAAGGAGCGGCGCATCAGACTTCGAGAAGAGAAGCTCCAGATGCAAAAGATCCTACAGGAGGAGCATCTGCAGCGGGCCCGGGCGCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS-3UTR CAA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGGAGCTCGCCTTGCCCTaGATCCCTGGTCCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQELALP*IPGPLS
Trigger: GGACAAAGGACCAGGGATCAAGGGCAAGGCGAGCTC...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTTCGGCCTGCTCGATCTaGACCTGGGGCACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TQETERTQLGHSRPSPVSSACSI*TWGTCS
Trigger: GGAGCACGTGCCCCAGGTCAAGATCGAGCAGGCCGA...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGCTGCCTCTCTTCTTCTaGATCTCAGCCTGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQLPLFF*ISAWAR
Trigger: GCGCGCCCAGGCTGAGATCAAGAAGAAGAGAGGCAG...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS TCA 90 bp GCACGTGCTCCAGGTTCTCTAGCAGCTCATCCAGCTGGTGCTCAATaGTGGTCAGCATCTGCACGGTGCCCAGGTTGGCCTCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: ARAPGSLAAHPAGAQ*WSASARCPGWPPAG
Trigger: CCCAGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGACCATCATTGAGCACCAGCTGGATGAGCTGCTAGAGAACCTGGAGCACGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS TCA 90 bp AGCCTTCCACCGGCTGCTGGCCACTGCTTTGCGTCCACGCCCAGGTaGCTACCGGGACCATGGAAGGTAGTGTTCTTGTCCTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SLPPAAGHCFASTPR*LPGPWKVVFLSSVS
Trigger: GGAGACAGAGGACAAGAACACTACCTTCCATGGTCCCGGTAGTCACCTGGGCGTGGACGCAAAGCAGTGGCCAGCAGCCGGTGGAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503905.1
CDS GCA 90 bp AGCGACAGGTTCTGCTCCTCCAGCTCTCGGAAGACATCCAGGAGCTaGTGGGGCTCCGTGAAGTACAGCTGTGGTTCCTCCCCATCGCTG +
Preference number: 5 (lower is better)
Translates to: SDRFCSSSSRKTSRS*WGSVKYSCGSSPSL
Trigger: CAGCGATGGGGAGGAACCACAGCTGTACTTCACGGAGCCCCAGCAGCTCCTGGATGTCTTCCGAGAGCTGGAGGAGCAGAACCTGTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 90 bp AGGGTCTTCTCCGTCTCCTGGCTGTTCTGGATCAGCGACAGGTTCTaGTCCTCCAGCTCTCGGAAGACATCCAGGAGCTGCTGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RVFSVSWLFWISDRF*SSSSRKTSRSCWGS
Trigger: GGAGCCCCAGCAGCTCCTGGATGTCTTCCGAGAGCTGGAGGAGCAGAACCTGTCGCTGATCCAGAACAGCCAGGAGACGGAGAAGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 90 bp TTCTCTAGCAGCTCATCCAGCTGGTGCTCAATGATGGTCAGCATCTaGACGGTGCCCAGGTTGGCCTCCTGCTGGGTGCCGGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: FSSSSSSWCSMMVSI*TVPRLASCWVPVQC
Trigger: GCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGACCATCATTGAGCACCAGCTGGATGAGCTGCTAGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CCA 90 bp GACAGGTTCTGCTCCTCCAGCTCTCGGAAGACATCCAGGAGCTGCTaGGGCTCCGTGAAGTACAGCTGTGGTTCCTCCCCATCGCTGTCG +
Preference number: 5 (lower is better)
Translates to: DRFCSSSSRKTSRSC*GSVKYSCGSSPSLS
Trigger: CGACAGCGATGGGGAGGAACCACAGCTGTACTTCACGGAGCCCCAGCAGCTCCTGGATGTCTTCCGAGAGCTGGAGGAGCAGAACCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CCA 90 bp TCAATGATGGTCAGCATCTGCACGGTGCCCAGGTTGGCCTCCTGCTaGGTGCCGGTGCAGTGCCGGTACACATCCAGCACCTTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: SMMVSICTVPRLASC*VPVQCRYTSSTLQF
Trigger: GAACTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGACCATCATTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS-3UTR CAA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCGAGCTCGCCTTGCCCTaGATCCCTGGTCCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: HTGDREDSVGPLETQPSLELALP*IPGPLS
Trigger: GGACAAAGGACCAGGGATCAAGGGCAAGGCGAGCTC...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCACTGCTTCAGCTGGTaGACCTCCCTGTCCATGCGG +
Preference number: 5 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLHCFSW*TSLSMR
Trigger: CCGCATGGACAGGGAGGTCAACCAGCTGAAGCAGTG...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCACAGAGAGGACTCAGTaGGGCCACTCGAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: STQETERTQLGHSRPSPVTERTQ*GHSRPS
Trigger: GCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGACAGAGAGGACTCAGTaGGGCCACTCGAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLTERTQ*GHSRPS
Trigger: GCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 90 bp CCTCCTGCTGGGTGCCGGTGCAGTGCCGGTACACATCCAGCACCTTaGAGTTCAGGCTCTCTAGCAGCTTATCCTGCTGATCGCCCTTGT +
Preference number: 5 (lower is better)
Translates to: PPAGCRCSAGTHPAP*SSGSLAAYPADRPC
Trigger: ACAAGGGCGATCAGCAGGATAAGCTGCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCCAGCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 90 bp CCTCTCTTCTTCTTGATCTCAGCCTGGGCGCGCGCCCGGGCCCGCTaGAGATGCTCCTCCTGTAGGATCTTTTGCATCTGGAGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PLFFLISAWARARAR*RCSSCRIFCIWSFS
Trigger: AGAGAAGCTCCAGATGCAAAAGATCCTACAGGAGGAGCATCTGCAGCGGGCCCGGGCGCGCGCCCAGGCTGAGATCAAGAAGAAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CCA 90 bp TTGACCTGGGGCACGTGCTCCAGGTTCTCTAGCAGCTCATCCAGCTaGTGCTCAATGATGGTCAGCATCTGCACGGTGCCCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LTWGTCSRFSSSSSS*CSMMVSICTVPRLA
Trigger: GGCCAACCTGGGCACCGTGCAGATGCTGACCATCATTGAGCACCAGCTGGATGAGCTGCTAGAGAACCTGGAGCACGTGCCCCAGGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS-3UTR CAA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCACACTGCTTCAGCTGGTaGACCTCCCTGTCCATGCGG +
Preference number: 5 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPHCFSW*TSLSMR
Trigger: CCGCATGGACAGGGAGGTCAACCAGCTGAAGCAGTG...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCACTGCCTCTCTTCTTCTaGATCTCAGCCTGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPLPLFF*ISAWAR
Trigger: GCGCGCCCAGGCTGAGATCAAGAAGAAGAGAGGCAG...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS TCA 90 bp TCTCAGCCGCTCTCATGGCCTGCACGGAGCTGCAGTCATTCTCCCTaGCGAACTCGTCGAACAAGGCGGCGTCCTTCTCCAGGGATTTCT +
Preference number: 5 (lower is better)
Translates to: SQPLSWPARSCSHSP*RTRRTRRRPSPGIS
Trigger: AGAAATCCCTGGAGAAGGACGCCGCCTTGTTCGACGAGTTCGTCAGGGAGAATGACTGCAGCTCCGTGCAGGCCATGAGAGCGGCTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS TCA 90 bp GCTCCTCCTCCTCCTTGTCCATCAGTGTGTGCTCAGACTGTTGTTTaGTCCTGTGGGCTGGGGGTCGTGAGCGGCATACCAGTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: APPPPCPSVCAQTVV*SCGLGVVSGIPVSC
Trigger: GCAGGACACTGGTATGCCGCTCACGACCCCCAGCCCACAGGATCAAACAACAGTCTGAGCACACACTGATGGACAAGGAGGAGGAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS GCA 90 bp TTCTTCTTGATCTCAGCCTGGGCGCGCGCCCGGGCCCGCTGCAGATaGTCCTCCTGTAGGATCTTTTGCATCTGGAGCTTCTCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: FFLISAWARARARCR*SSCRIFCIWSFSSR
Trigger: TCGAGAAGAGAAGCTCCAGATGCAAAAGATCCTACAGGAGGAGCATCTGCAGCGGGCCCGGGCGCGCGCCCAGGCTGAGATCAAGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CCA 90 bp TCTCTCAGGGTCCATCAATCCATGGAGACAGGAAATGACTCACCCTaGGCTCTGAGCTTGCCCTCAGCTCACCCTCTGGAGTCGCCACCG +
Preference number: 5 (lower is better)
Translates to: SLRVHQSMETGNDSP*ALSLPSAHPLESPP
Trigger: CGGTGGCGACTCCAGAGGGTGAGCTGAGGGCAAGCTCAGAGCCCAGGGTGAGTCATTTCCTGTCTCCATGGATTGATGGACCCTGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507830.1
CDS-3UTR CAA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTTGGATCTCTCTCCGCTaGACATCCAGGGCATACTGG +
Preference number: 5 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSWISLR*TSRAYW
Trigger: CCAGTATGCCCTGGATGTCAAGCGGAGAGAGATCCA...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTTCAAGCCACTCCTaGGGCGACAGCTTGTATAGG +
Preference number: 5 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQSSSHS*GDSLYR
Trigger: CCTATACAAGCTGTCGCCCAAGGAGTGGCTTGAAGA...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGGCCTCGGAGACCTCCTaGGCCTTTTTGAGAAACGAG +
Preference number: 5 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLASETS*AFLRNE
Trigger: CTCGTTTCTCAAAAAGGCCAAGGAGGTCTCCGAGGC...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCACCTCCAGGGCTTCTTaGTACCCTGACCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: TGDREDSVGPLETQPSLCTSRAS*YPDPLW
Trigger: CCAAAGAGGGTCAGGGTACAAAGAAGCCCTGGAGGT...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCTGCTCAGACTGTTGTTaGATCCTGTGGGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: EEGSTQETERTQLGHSRPCSDCC*ILWAGG
Trigger: ACCCCCAGCCCACAGGATCAAACAACAGTCTGAGCA...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTTGCTCAGACTGTTGTTaGATCCTGTGGGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: EHTGDREDSVGPLETQPSCSDCC*ILWAGG
Trigger: ACCCCCAGCCCACAGGATCAAACAACAGTCTGAGCA...ACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS TCA 90 bp AGGGACCACCTCTCTCAGGGTCCATCAATCCATGGAGACAGGAAATaGCTCACCCTGGGCTCTGAGCTTGCCCTCAGCTCACCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: RDHLSQGPSIHGDRK*LTLGSELALSSPSG
Trigger: TCCAGAGGGTGAGCTGAGGGCAAGCTCAGAGCCCAGGGTGAGTCATTTCCTGTCTCCATGGATTGATGGACCCTGAGAGAGGTGGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507830.1
CDS GCA 90 bp TTCTCCTTTGCCCTCTCGGCCTGCTCGATCTTGACCTGGGGCACGTaGTCCAGGTTCTCTAGCAGCTCATCCAGCTGGTGCTCAATGATG +
Preference number: 5 (lower is better)
Translates to: FSFALSACSILTWGT*SRFSSSSSSWCSMM
Trigger: CATCATTGAGCACCAGCTGGATGAGCTGCTAGAGAACCTGGAGCACGTGCCCCAGGTCAAGATCGAGCAGGCCGAGAGGGCAAAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CCA 90 bp GCCCGGGCCCGCTGCAGATGCTCCTCCTGTAGGATCTTTTGCATCTaGAGCTTCTCTTCTCGAAGTCTGATGCGCCGCTCCTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: ARARCRCSSCRIFCI*SFSSRSLMRRSFSF
Trigger: AAAGGAGAAGGAGCGGCGCATCAGACTTCGAGAAGAGAAGCTCCAGATGCAAAAGATCCTACAGGAGGAGCATCTGCAGCGGGCCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS-3UTR CAA 90 bp AGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTGAGGCCCAAGAGGTaGATGCAAGGCTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RQRGLSWATRDPAQSLLPLRPKR*MQGFSS
Trigger: AGAGGAGAAGCCTTGCATCAACCTCTTGGGCCTCAG...AGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352312.6
CDS-3UTR CAA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCGGTATCTCAGACATCTaGGCTGAGGCCCAAGAGGTT +
Preference number: 5 (lower is better)
Translates to: STQETERTQLGHSRPSPVGISDI*AEAQEV
Trigger: AACCTCTTGGGCCTCAGCCAAGATGTCTGAGATACC...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp CACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCGGTATCTCAGACATCTaGGCTGAGGCCCAAGAGGTT +
Preference number: 5 (lower is better)
Translates to: HTGDREDSVGPLETQPSLGISDI*AEAQEV
Trigger: AACCTCTTGGGCCTCAGCCAAGATGTCTGAGATACC...GAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTTGGATCTCTCTCCGCTaGACATCCAGGGCATACTGG +
Preference number: 5 (lower is better)
Translates to: TQETERTQLGHSRPSPVSWISLR*TSRAYW
Trigger: CCAGTATGCCCTGGATGTCAAGCGGAGAGAGATCCA...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCTCTTCAAGCCACTCCTaGGGCGACAGCTTGTATAGG +
Preference number: 5 (lower is better)
Translates to: EEGSTQETERTQLGHSRPSSSHS*GDSLYR
Trigger: CCTATACAAGCTGTCGCCCAAGGAGTGGCTTGAAGA...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCCTCGGAGACCTCCTaGGCCTTTTTGAGAAACGAG +
Preference number: 5 (lower is better)
Translates to: TQETERTQLGHSRPSPVSASETS*AFLRNE
Trigger: CTCGTTTCTCAAAAAGGCCAAGGAGGTCTCCGAGGC...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTTTGATCCCTGGTCCTTaGTCCCCTGGTGTGGAGTTA +
Preference number: 5 (lower is better)
Translates to: EHTGDREDSVGPLETQPSLIPGP*SPGVEL
Trigger: TAACTCCACACCAGGGGACAAAGGACCAGGGATCAA...ACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp ACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTACCTCCAGGGCTTCTTaGTACCCTGACCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: TQETERTQLGHSRPSPVSTSRAS*YPDPLW
Trigger: CCAAAGAGGGTCAGGGTACAAAGAAGCCCTGGAGGT...AGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCTACACATCCAGCACCTaGCAGTTCAGGCTCTCTAGC +
Preference number: 5 (lower is better)
Translates to: EEGSTQETERTQLGHSRPYTSST*QFRLSS
Trigger: GCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGTA...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp AGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTACACATCCAGCACCTaGCAGTTCAGGCTCTCTAGC +
Preference number: 5 (lower is better)
Translates to: STQETERTQLGHSRPSPVYTSST*QFRLSS
Trigger: GCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGTA...GACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 90 bp CCTCCTGCTGGGTGCCGGTGCAGTGCCGGTACACATCCAGCACCTTaGAGTTCAGGCTCTCTAGCAGCTTATCCTTGCCAGACACAATAT +
Preference number: 5 (lower is better)
Translates to: PPAGCRCSAGTHPAP*SSGSLAAYPCQTQY
Trigger: ATATTGTGTCTGGCAAGGATAAGCTGCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCCAGCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506204.1
CDS CCA 90 bp TCCTCCTTGTCCATCAGTGTGTGCTCAGACTGTTGTTTGATCCTGTaGGCTGGGGGTCGTGAGCGGCATACCAGTGTCCTGCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SSLSISVCSDCCLIL*AGGRERHTSVLPLF
Trigger: GAAGAGAGGCAGGACACTGGTATGCCGCTCACGACCCCCAGCCCACAGGATCAAACAACAGTCTGAGCACACACTGATGGACAAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS-3UTR CAA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCATTAACACTGCTCTCTTaGGAAGCCTCGGAGACCTCC +
Preference number: 5 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPLTLLS*EASETS
Trigger: GGAGGTCTCCGAGGCTTCCAAAGAGAGCAGTGTTAA...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTTTAACACTGCTCTCTTaGGAAGCCTCGGAGACCTCC +
Preference number: 5 (lower is better)
Translates to: TERTQLGHSRPSPVSASSLTLLS*EASETS
Trigger: GGAGGTCTCCGAGGCTTCCAAAGAGAGCAGTGTTAA...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCATTGATCCCTGGTCCTTaGTCCCCTGGTGTGGAGTTA +
Preference number: 5 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPLIPGP*SPGVEL
Trigger: TAACTCCACACCAGGGGACAAAGGACCAGGGATCAA...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGGCTGTGTCCTCCTCCTaGGTGATGGACATCATCATT +
Preference number: 5 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLAVSSS*VMDIII
Trigger: AATGATGATGTCCATCACCAAGGAGGAGGACACAGC...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp AGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTTGTGTGCTCAGACTGTaGTTTGATCCTGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RQRGLSWATRDPAQSLLPCVLRL*FDPVGW
Trigger: CCAGCCCACAGGATCAAACAACAGTCTGAGCACACA...AGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCCCTCTGCCAACATCTTaGCTAAGCCTTCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: TGDREDSVGPLETQPSLCPLPTS*LSLQPE
Trigger: TTCTGGCTGAAGGCTTAGCAAAGATGTTGGCAGAGG...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCCCTCTGCCAACATCTTaGCTAAGCCTTCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: ETERTQLGHSRPSPVSASPLPTS*LSLQPE
Trigger: TTCTGGCTGAAGGCTTAGCAAAGATGTTGGCAGAGG...GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS TCA 90 bp TGTATTGTACTCACCTACTTTCAGCTCCGGCAACTTTGGTCAAGGTaGGCTTCCAGGTCGTGTAGTCGCGGAAGGCGCGCTGATGCTCGG +
Preference number: 5 (lower is better)
Translates to: CIVLTYFQLRQLWSR*ASRSCSRGRRADAR
Trigger: CCGAGCATCAGCGCGCCTTCCGCGACTACACGACCTGGAAGCTCACCTTGACCAAAGTTGCCGGAGCTGAAAGTAGGTGAGTACAATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533201.1
CDS GCA 90 bp GTGTCCTCCTCCTTGGTGATGGACATCATCATTGTGGTGACCCACTaGTTCAGCTGGTTGACCTCCCTGTCCATGCGGATCTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: VSSSLVMDIIIVVTH*FSWLTSLSMRIWVC
Trigger: ACACACCCAGATCCGCATGGACAGGGAGGTCAACCAGCTGAAGCAGTGGGTCACCACAATGATGATGTCCATCACCAAGGAGGAGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 90 bp GTACTCGCCGAAGTGGAAGACTCGGGCTTTGAGCTCCAGCTCAGCTaGTGTGTCCTCCTCCTTGGTGATGGACATCATCATTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: VLAEVEDSGFELQLS*CVLLLGDGHHHCGD
Trigger: GTCACCACAATGATGATGTCCATCACCAAGGAGGAGGACACAGCAGCTGAGCTGGAGCTCAAAGCCCGAGTCTTCCACTTCGGCGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGGATTCCAGGCTGTTCTaGTCATTGGTCATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQDSRLF*SLVMFL
Trigger: CAAGAACATGACCAATGACAAGAACAGCCTGGAATC...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTGGAGGAGGAACATTaGCCGCTTCTGCTTAATGTA +
Preference number: 5 (lower is better)
Translates to: GDREDSVGPLETQPSLCFLEEEH*PLLLNV
Trigger: TACATTAAGCAGAAGCGGCAAATGTTCCTCCTCCAG...GAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCCTGGAGGAGGAACATTaGCCGCTTCTGCTTAATGTA +
Preference number: 5 (lower is better)
Translates to: EEGSTQETERTQLGHSRPLEEEH*PLLLNV
Trigger: TACATTAAGCAGAAGCGGCAAATGTTCCTCCTCCAG...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTGCTGTGTCCTCCTCCTaGGTGATGGACATCATCATT +
Preference number: 5 (lower is better)
Translates to: TERTQLGHSRPSPVSASSAVSSS*VMDIII
Trigger: AATGATGATGTCCATCACCAAGGAGGAGGACACAGC...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 90 bp CTGCTTAATGTAGCCACTCATGTTCTCAGGCTCCACATTCTTTTCTaGTGGAAGAAGAGGGAGGTGAGCAGGAGCGGGAAGCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LLNVATHVLRLHILF*WKKREVSRSGKPRL
Trigger: CAGCCTGGGCTTCCCGCTCCTGCTCACCTCCCTCTTCTTCCAGCAGAAAAGAATGTGGAGCCTGAGAACATGAGTGGCTACATTAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503905.1
CDS CCA 90 bp CTCTGCCTGAAATGTTACATTCTCCATGGCCAGAGTCCGGCCGCGTaGGAAGTCCTTACTGTGTCTGACTTGCGCCTTTCTTGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: LCLKCYILHGQSPAA*EVLTVSDLRLSCCS
Trigger: GCTACAGCAAGAAAGGCGCAAGTCAGACACAGTAAGGACTTCCCACGCGGCCGGACTCTGGCCATGGAGAATGTAACATTTCAGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503905.1
CDS-3UTR CAA 90 bp GAGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGGCTGTTCTTGTCATaGGTCATGTTCTTGGAGACT +
Preference number: 5 (lower is better)
Translates to: EEGSTQETERTQLGHSRPRLFLS*VMFLET
Trigger: AGTCTCCAAGAACATGACCAATGACAAGAACAGCCT...GGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCAGGCTGTTCTTGTCATaGGTCATGTTCTTGGAGACT +
Preference number: 5 (lower is better)
Translates to: DREDSVGPLETQPSLCFLRLFLS*VMFLET
Trigger: AGTCTCCAAGAACATGACCAATGACAAGAACAGCCT...GAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp ACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCGATTCCAGGCTGTTCTaGTCATTGGTCATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: TGDREDSVGPLETQPSLCDSRLF*SLVMFL
Trigger: CAAGAACATGACCAATGACAAGAACAGCCTGGAATC...GCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTTCCACATTCTTTTCTTaGGTCAAGGTGAGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: AHRRQRGLSWATRDPAQSSTFFS*VKVSFQ
Trigger: CTGGAAGCTCACCTTGACCAAAGAAAAGAATGTGGA...AGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352312.6
CDS-3UTR CAA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGACCTCCTTGGCCTTTTaGAGAAACGAGTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQTSLAF*RNECFF
Trigger: AAAGAAACACTCGTTTCTCAAAAAGGCCAAGGAGGT...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp CACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGACATTCTTTTCTGCTTaGGTCAAGGTGAGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: HRRQRGLSWATRDPAQSLTFFSA*VKVSFQ
Trigger: CTGGAAGCTCACCTTGACCAAAGCAGAAAAGAATGT...CAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505024.1
CDS-3UTR CAA 90 bp ACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTTCATTGGTCATGTTCTaGGAGACTATAGTGGACGGT +
Preference number: 5 (lower is better)
Translates to: TERTQLGHSRPSPVSASSSLVMF*ETIVDG
Trigger: ACCGTCCACTATAGTCTCCAAGAACATGACCAATGA...AGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp AGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTTCATTGGTCATGTTCTaGGAGACTATAGTGGACGGT +
Preference number: 5 (lower is better)
Translates to: RQRGLSWATRDPAQSLLPSLVMF*ETIVDG
Trigger: ACCGTCCACTATAGTCTCCAAGAACATGACCAATGA...AGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGCTGGAGATCTCACTTTaGATATTAACAATCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GAHRRQRGLSWATRDPAQLEISL*ILTIWV
Trigger: CACCCAGATTGTTAATATCAAAAGTGAGATCTCCAG...CTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp GAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCAGCCCAGTCTCTGCTTCCACCTCCTTGGCCTTTTaGAGAAACGAGTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: ETERTQLGHSRPSPVSASTSLAF*RNECFF
Trigger: AAAGAAACACTCGTTTCTCAAAAAGGCCAAGGAGGT...GGAAGCAGAGACTGGGCTGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS TCA 90 bp TCTGCTGCTGCCGTTCGGAGAGAGCCTTATTCCGCTCCTGATCTCTaGGCAAGAAGAAATCCACATCCCCAGATAAGTGGAAAGGGTTCG +
Preference number: 5 (lower is better)
Translates to: SAAAVRREPYSAPDL*ARRNPHPQISGKGS
Trigger: CGAACCCTTTCCACTTATCTGGGGATGTGGATTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGCTCTCTCCGAACGGCAGCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS-3UTR CAA 90 bp AGGAAGGGAGCACACAGGAGACAGAGAGGACTCAGTTGGGCCACTCGAGACCCACTGGAGATCTCACTTTaGATATTAACAATCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RKGAHRRQRGLSWATRDPLEISL*ILTIWV
Trigger: CACCCAGATTGTTAATATCAAAAGTGAGATCTCCAG...TGGGTCTCGAGTGGCCCAACTGAGTCCTCTCTGTCTCCTGTGTGCTCCCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS TCA 90 bp ATCGTCTTCTGCTGCTGCCGTTCGGAGAGAGCCTTATTCCGCTCCTaGTCTCTGAGCAAGAAGAAATCCACATCCCCAGATAAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: IVFCCCRSERALFRS*SLSKKKSTSPDKWK
Trigger: TTTCCACTTATCTGGGGATGTGGATTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGCTCTCTCCGAACGGCAGCAGCAGAAGACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS TCA 90 bp TGTCCTGGATACTCACGGAGAGAGCCTTATTCCGCTCCTGATCTCTaGGCAAGAAGAAATCCACATCCCCAGATAAGTGGAAAGGGTTCG +
Preference number: 5 (lower is better)
Translates to: CPGYSRREPYSAPDL*ARRNPHPQISGKGS
Trigger: CGAACCCTTTCCACTTATCTGGGGATGTGGATTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGCTCTCTCCGTGAGTATCCAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510833.5
CDS TCA 90 bp TGGCGTCTGTCCTGGATACTCACGGAGAGAGCCTTATTCCGCTCCTaGTCTCTGAGCAAGAAGAAATCCACATCCCCAGATAAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: WRLSWILTERALFRS*SLSKKKSTSPDKWK
Trigger: TTTCCACTTATCTGGGGATGTGGATTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGCTCTCTCCGTGAGTATCCAGGACAGACGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510833.5
CDS TCA 90 bp CCAGCTGATTTTATAGTAAGTGGTGAGCTATTGACTATTCTGGAATaGGAAGGACCTGAGGAAAGTGCTCCTCTGAGAAGGGCAATGTGG +
Preference number: 5 (lower is better)
Translates to: PADFIVSGELLTILE*EGPEESAPLRRAMW
Trigger: CCACATTGCCCTTCTCAGAGGAGCACTTTCCTCAGGTCCTTCTCATTCCAGAATAGTCAATAGCTCACCACTTACTATAAAATCAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510833.5
CDS TCA 90 bp TTCTTGCCTGTTTCTTTGGGTTCTCTTCAGTGCTTGAAGAAGAGCTaGTGTTCATGGATTCCAGGCTGTTCTTGTCATTGGTCATGTTCT +
Preference number: 5 (lower is better)
Translates to: FLPVSLGSLQCLKKS*CSWIPGCSCHWSCS
Trigger: AGAACATGACCAATGACAAGAACAGCCTGGAATCCATGAACATCAGCTCTTCTTCAAGCACTGAAGAGAACCCAAAGAAACAGGCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000510833.5
CDS CAA 90 bp CGACCCTCTGGAGTCGCCACCGCTGGACTCGCTGGGCTGGCTGCCTaGCTGGGGGCTGCTCAGGTAAGACGGGCTCCGCCCCAGCCGCAT +
Preference number: 6 (lower is better)
Translates to: RPSGVATAGLAGLAA*LGAAQVRRAPPQPH
Trigger: ATGCGGCTGGGGCGGAGCCCGTCTTACCTGAGCAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTGGCGACTCCAGAGGGTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CCA 72 bp GCTTGCCCTCAGCTCACCCTCTGGAGTCGCCACCGCTaGACTCGCTGGGCTGGCTGCCTTGCTGGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: ACPQLTLWSRHR*TRWAGCLAGGC
Trigger: GCAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTGGCGACTCCAGAGGGTGAGCTGAGGGCAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507830.1
CDS CAA 90 bp TCACCCTCTGGAGTCGCCACCGCTGGACTCGCTGGGCTGGCTGCCTaGCTGGGGGCTGCTCAGGTAAGACGGGCTCCGCCCCAGCCGCAT +
Preference number: 6 (lower is better)
Translates to: SPSGVATAGLAGLAA*LGAAQVRRAPPQPH
Trigger: ATGCGGCTGGGGCGGAGCCCGTCTTACCTGAGCAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTGGCGACTCCAGAGGGTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507830.1
CDS GCA 72 bp CTCTGGAGTCGCCACCGCTGGACTCGCTGGGCTGGCTaGCTTGCTGGGGGCTGCTCAGGTAAGACGGGCTCC +
Preference number: 6 (lower is better)
Translates to: LWSRHRWTRWAG*LAGGCSGKTGS
Trigger: GGAGCCCGTCTTACCTGAGCAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTGGCGACTCCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000507830.1
CDS CCA 72 bp GGATGGGAGAGTTCGACCCTCTGGAGTCGCCACCGCTaGACTCGCTGGGCTGGCTGCCTTGCTGGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GWESSTLWSRHR*TRWAGCLAGGC
Trigger: GCAGCCCCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTGGCGACTCCAGAGGGTCGAACTCTCCCATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 72 bp GGGCCTGGCAGGTCTGCAGAGGAGCCTTCCACCGGCTaGTGGCCACTGCTTTGCGTCCACGCCCAGGTGACT +
Preference number: 6 (lower is better)
Translates to: GPGRSAEEPSTG*WPLLCVHAQVT
Trigger: AGTCACCTGGGCGTGGACGCAAAGCAGTGGCCAGCAGCCGGTGGAAGGCTCCTCTGCAGACCTGCCAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503905.1
CDS CCA 72 bp GGGATTTCTCGGCCCGCTCCAGCCTGGCCTCCTCTTTaGTCGCCAGCGTCTCCAGCCGCTGGATCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: GISRPAPAWPPL*SPASPAAGSLS
Trigger: GGAGAGAGATCCAGCGGCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGCTGGAGCGGGCCGAGAAATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CCA 72 bp CGTCCTTCTCCAGGGATTTCTCGGCCCGCTCCAGCCTaGCCTCCTCTTTGGTCGCCAGCGTCTCCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: RPSPGISRPAPA*PPLWSPASPAA
Trigger: AGCGGCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGCTGGAGCGGGCCGAGAAATCCCTGGAGAAGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CCA 72 bp CCTGGCAGGTCTGCAGAGGAGCCTTCCACCGGCTGCTaGCCACTGCTTTGCGTCCACGCCCAGGTGACTACC +
Preference number: 6 (lower is better)
Translates to: PGRSAEEPSTGC*PLLCVHAQVTT
Trigger: GGTAGTCACCTGGGCGTGGACGCAAAGCAGTGGCCAGCAGCCGGTGGAAGGCTCCTCTGCAGACCTGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503905.1
CDS GCA 72 bp GTGCCCAGGTTGGCCTCCTGCTGGGTGCCGGTGCAGTaGCGGTACACATCCAGCACCTTGCAGTTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: VPRLASCWVPVQ*RYTSSTLQFRL
Trigger: GAGCCTGAACTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS GCA 72 bp GCACGGTGCCCAGGTTGGCCTCCTGCTGGGTGCCGGTaGAGTGCCGGTACACATCCAGCACCTTGCAGTTCA +
Preference number: 6 (lower is better)
Translates to: ARCPGWPPAGCR*SAGTHPAPCSS
Trigger: TGAACTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS GCA 72 bp ATGGTCAGCATCTGCACGGTGCCCAGGTTGGCCTCCTaGTGGGTGCCGGTGCAGTGCCGGTACACATCCAGC +
Preference number: 6 (lower is better)
Translates to: MVSICTVPRLAS*WVPVQCRYTSS
Trigger: GCTGGATGTGTACCGGCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGACCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS GCA 72 bp GCAGAGGAGCCTTCCACCGGCTGCTGGCCACTGCTTTaGGTCCACGCCCAGGTGACTACCGGGACCATGGAA +
Preference number: 6 (lower is better)
Translates to: AEEPSTGCWPLL*VHAQVTTGTME
Trigger: TTCCATGGTCCCGGTAGTCACCTGGGCGTGGACGCAAAGCAGTGGCCAGCAGCCGGTGGAAGGCTCCTCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503905.1
CDS CAA 72 bp AGGGATTTCTCGGCCCGCTCCAGCCTGGCCTCCTCTTaGGTCGCCAGCGTCTCCAGCCGCTGGATCTCTCTC +
Preference number: 6 (lower is better)
Translates to: RDFSARSSLASS*VASVSSRWISL
Trigger: GAGAGAGATCCAGCGGCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGCTGGAGCGGGCCGAGAAATCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CAA 72 bp TGCAGAGGAGCCTTCCACCGGCTGCTGGCCACTGCTTaGCGTCCACGCCCAGGTGACTACCGGGACCATGGA +
Preference number: 6 (lower is better)
Translates to: CRGAFHRLLATA*RPRPGDYRDHG
Trigger: TCCATGGTCCCGGTAGTCACCTGGGCGTGGACGCAAAGCAGTGGCCAGCAGCCGGTGGAAGGCTCCTCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503905.1
CDS GCA 72 bp ATCTCAGCCTGGGCGCGCGCCCGGGCCCGCTGCAGATaGTCCTCCTGTAGGATCTTTTGCATCTGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: ISAWARARARCR*SSCRIFCIWSF
Trigger: GAAGCTCCAGATGCAAAAGATCCTACAGGAGGAGCATCTGCAGCGGGCCCGGGCGCGCGCCCAGGCTGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CAA 72 bp TGCTCAATGATGGTCAGCATCTGCACGGTGCCCAGGTaGGCCTCCTGCTGGGTGCCGGTGCAGTGCCGGTAC +
Preference number: 6 (lower is better)
Translates to: CSMMVSICTVPR*ASCWVPVQCRY
Trigger: GTACCGGCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGACCATCATTGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CAA 90 bp TCCTTCTCCAGGGATTTCTCGGCCCGCTCCAGCCTGGCCTCCTCTTaGGTCGCCAGCGTCTCCAGCCGCTGGATCTCTCTCCGCTTGACA +
Preference number: 6 (lower is better)
Translates to: SFSRDFSARSSLASS*VASVSSRWISLRLT
Trigger: TGTCAAGCGGAGAGAGATCCAGCGGCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGCTGGAGCGGGCCGAGAAATCCCTGGAGAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CAA 90 bp TCCAGCTGGTGCTCAATGATGGTCAGCATCTGCACGGTGCCCAGGTaGGCCTCCTGCTGGGTGCCGGTGCAGTGCCGGTACACATCCAGC +
Preference number: 6 (lower is better)
Translates to: SSWCSMMVSICTVPR*ASCWVPVQCRYTSS
Trigger: GCTGGATGTGTACCGGCACTGCACCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGACCATCATTGAGCACCAGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS TCA 72 bp GCTCTCGGAAGACATCCAGGAGCTGCTGGGGCTCCGTaGAGTACAGCTGTGGTTCCTCCCCATCGCTGTCGG +
Preference number: 6 (lower is better)
Translates to: ALGRHPGAAGAP*STAVVPPHRCR
Trigger: CCGACAGCGATGGGGAGGAACCACAGCTGTACTTCACGGAGCCCCAGCAGCTCCTGGATGTCTTCCGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 72 bp AGCTCATCCAGCTGGTGCTCAATGATGGTCAGCATCTaGACGGTGCCCAGGTTGGCCTCCTGCTGGGTGCCG +
Preference number: 6 (lower is better)
Translates to: SSSSWCSMMVSI*TVPRLASCWVP
Trigger: CGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGACCATCATTGAGCACCAGCTGGATGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CCA 72 bp CTGGCCTCCTCTTTGGTCGCCAGCGTCTCCAGCCGCTaGATCTCTCTCCGCTTGACATCCAGGGCATACTGG +
Preference number: 6 (lower is better)
Translates to: LASSLVASVSSR*ISLRLTSRAYW
Trigger: CCAGTATGCCCTGGATGTCAAGCGGAGAGAGATCCAGCGGCTGGAGACGCTGGCGACCAAAGAGGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000503905.1
ENST00000505024.1
CDS GCA 72 bp CTCTTCTCGAAGTCTGATGCGCCGCTCCTTCTCCTTTaGCCTCTCGGCCTGCTCGATCTTGACCTGGGGCAC +
Preference number: 6 (lower is better)
Translates to: LFSKSDAPLLLL*PLGLLDLDLGH
Trigger: GTGCCCCAGGTCAAGATCGAGCAGGCCGAGAGGGCAAAGGAGAAGGAGCGGCGCATCAGACTTCGAGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CCA 72 bp TGCTCCTCCAGCTCTCGGAAGACATCCAGGAGCTGCTaGGGCTCCGTGAAGTACAGCTGTGGTTCCTCCCCA +
Preference number: 6 (lower is better)
Translates to: CSSSSRKTSRSC*GSVKYSCGSSP
Trigger: TGGGGAGGAACCACAGCTGTACTTCACGGAGCCCCAGCAGCTCCTGGATGTCTTCCGAGAGCTGGAGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CAA 90 bp CATCAATCCATGGAGACAGGAAATGACTCACCCTGGGCTCTGAGCTaGCCCTCAGCTCACCCTCTGGAGTCGCCACCGCTGGACTCGCTG +
Preference number: 6 (lower is better)
Translates to: HQSMETGNDSPWALS*PSAHPLESPPLDSL
Trigger: CAGCGAGTCCAGCGGTGGCGACTCCAGAGGGTGAGCTGAGGGCAAGCTCAGAGCCCAGGGTGAGTCATTTCCTGTCTCCATGGATTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507830.1
CDS TCA 72 bp CTCTCATGGCCTGCACGGAGCTGCAGTCATTCTCCCTaGCGAACTCGTCGAACAAGGCGGCGTCCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LSWPARSCSHSP*RTRRTRRRPSP
Trigger: TGGAGAAGGACGCCGCCTTGTTCGACGAGTTCGTCAGGGAGAATGACTGCAGCTCCGTGCAGGCCATGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 72 bp TTCTGCTCCTCCAGCTCTCGGAAGACATCCAGGAGCTaGTGGGGCTCCGTGAAGTACAGCTGTGGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: FCSSSSRKTSRS*WGSVKYSCGSS
Trigger: GGAGGAACCACAGCTGTACTTCACGGAGCCCCAGCAGCTCCTGGATGTCTTCCGAGAGCTGGAGGAGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 72 bp TCCGTCTCCTGGCTGTTCTGGATCAGCGACAGGTTCTaGTCCTCCAGCTCTCGGAAGACATCCAGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SVSWLFWISDRF*SSSSRKTSRSC
Trigger: GCAGCTCCTGGATGTCTTCCGAGAGCTGGAGGAGCAGAACCTGTCGCTGATCCAGAACAGCCAGGAGACGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 72 bp GGGTGCCGGTGCAGTGCCGGTACACATCCAGCACCTTaGAGTTCAGGCTCTCTAGCAGCTTATCCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: GCRCSAGTHPAP*SSGSLAAYPCQ
Trigger: CTGGCAAGGATAAGCTGCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506204.1
CDS CCA 72 bp GGCACGTGCTCCAGGTTCTCTAGCAGCTCATCCAGCTaGTGCTCAATGATGGTCAGCATCTGCACGGTGCCC +
Preference number: 6 (lower is better)
Translates to: GTCSRFSSSSSS*CSMMVSICTVP
Trigger: GGGCACCGTGCAGATGCTGACCATCATTGAGCACCAGCTGGATGAGCTGCTAGAGAACCTGGAGCACGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CCA 72 bp TTCTCCTTTGCCCTCTCGGCCTGCTCGATCTTGACCTaGGGCACGTGCTCCAGGTTCTCTAGCAGCTCATCC +
Preference number: 6 (lower is better)
Translates to: FSFALSACSILT*GTCSRFSSSSS
Trigger: GGATGAGCTGCTAGAGAACCTGGAGCACGTGCCCCAGGTCAAGATCGAGCAGGCCGAGAGGGCAAAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CAA 90 bp AGCTCCTCCTCCTCCTTGTCCATCAGTGTGTGCTCAGACTGTTGTTaGATCCTGTGGGCTGGGGGTCGTGAGCGGCATACCAGTGTCCTG +
Preference number: 6 (lower is better)
Translates to: SSSSSLSISVCSDCC*ILWAGGRERHTSVL
Trigger: CAGGACACTGGTATGCCGCTCACGACCCCCAGCCCACAGGATCAAACAACAGTCTGAGCACACACTGATGGACAAGGAGGAGGAGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CAA 90 bp GCCTCCTGCTGGGTGCCGGTGCAGTGCCGGTACACATCCAGCACCTaGCAGTTCAGGCTCTCTAGCAGCTTATCCTTGCCAGACACAATA +
Preference number: 6 (lower is better)
Translates to: ASCWVPVQCRYTSST*QFRLSSSLSLPDTI
Trigger: TATTGTGTCTGGCAAGGATAAGCTGCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCCAGCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506204.1
CDS TCA 72 bp CTCACCTACTTTCAGCTCCGGCAACTTTGGTCAAGGTaGGCTTCCAGGTCGTGTAGTCGCGGAAGGCGCGCT +
Preference number: 6 (lower is better)
Translates to: LTYFQLRQLWSR*ASRSCSRGRRA
Trigger: AGCGCGCCTTCCGCGACTACACGACCTGGAAGCTCACCTTGACCAAAGTTGCCGGAGCTGAAAGTAGGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533201.1
CDS GCA 72 bp TTGGCTTTGGTCTCCTTCTCAGCCGCTCTCATGGCCTaGACGGAGCTGCAGTCATTCTCCCTGACGAACTCG +
Preference number: 6 (lower is better)
Translates to: LALVSFSAALMA*TELQSFSLTNS
Trigger: CGAGTTCGTCAGGGAGAATGACTGCAGCTCCGTGCAGGCCATGAGAGCGGCTGAGAAGGAGACCAAAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 72 bp GGGTGCCGGTGCAGTGCCGGTACACATCCAGCACCTTaGAGTTCAGGCTCTCTAGCAGCTTATCCTGCTGAT +
Preference number: 6 (lower is better)
Translates to: GCRCSAGTHPAP*SSGSLAAYPAD
Trigger: ATCAGCAGGATAAGCTGCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CAA 72 bp TGGGTGCCGGTGCAGTGCCGGTACACATCCAGCACCTaGCAGTTCAGGCTCTCTAGCAGCTTATCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: WVPVQCRYTSST*QFRLSSSLSLP
Trigger: TGGCAAGGATAAGCTGCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGTACCGGCACTGCACCGGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506204.1
CDS TCA 72 bp CCTCCTTGTCCATCAGTGTGTGCTCAGACTGTTGTTTaGTCCTGTGGGCTGGGGGTCGTGAGCGGCATACCA +
Preference number: 6 (lower is better)
Translates to: PPCPSVCAQTVV*SCGLGVVSGIP
Trigger: TGGTATGCCGCTCACGACCCCCAGCCCACAGGATCAAACAACAGTCTGAGCACACACTGATGGACAAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS GCA 72 bp CGGGCCCGCTGCAGATGCTCCTCCTGTAGGATCTTTTaGATCTGGAGCTTCTCTTCTCGAAGTCTGATGCGC +
Preference number: 6 (lower is better)
Translates to: RARCRCSSCRIF*IWSFSSRSLMR
Trigger: GCGCATCAGACTTCGAGAAGAGAAGCTCCAGATGCAAAAGATCCTACAGGAGGAGCATCTGCAGCGGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS CCA 72 bp TCCATCAGTGTGTGCTCAGACTGTTGTTTGATCCTGTaGGCTGGGGGTCGTGAGCGGCATACCAGTGTCCTG +
Preference number: 6 (lower is better)
Translates to: SISVCSDCCLIL*AGGRERHTSVL
Trigger: CAGGACACTGGTATGCCGCTCACGACCCCCAGCCCACAGGATCAAACAACAGTCTGAGCACACACTGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS TCA 72 bp CTCAGACTGTTGTTTGATCCTGTGGGCTGGGGGTCGTaGGCGGCATACCAGTGTCCTGCCTCTCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: LRLLFDPVGWGS*AAYQCPASLLL
Trigger: AAGAAGAAGAGAGGCAGGACACTGGTATGCCGCTCACGACCCCCAGCCCACAGGATCAAACAACAGTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS TCA 72 bp CTCTCTCAGGGTCCATCAATCCATGGAGACAGGAAATaGCTCACCCTGGGCTCTGAGCTTGCCCTCAGCTCA +
Preference number: 6 (lower is better)
Translates to: LSQGPSIHGDRK*LTLGSELALSS
Trigger: TGAGCTGAGGGCAAGCTCAGAGCCCAGGGTGAGTCATTTCCTGTCTCCATGGATTGATGGACCCTGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507830.1
CDS CCA 72 bp CGCTGCAGATGCTCCTCCTGTAGGATCTTTTGCATCTaGAGCTTCTCTTCTCGAAGTCTGATGCGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: RCRCSSCRIFCI*SFSSRSLMRRS
Trigger: GGAGCGGCGCATCAGACTTCGAGAAGAGAAGCTCCAGATGCAAAAGATCCTACAGGAGGAGCATCTGCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS GCA 72 bp TCCTTGGTGATGGACATCATCATTGTGGTGACCCACTaGTTCAGCTGGTTGACCTCCCTGTCCATGCGGATC +
Preference number: 6 (lower is better)
Translates to: SLVMDIIIVVTH*FSWLTSLSMRI
Trigger: GATCCGCATGGACAGGGAGGTCAACCAGCTGAAGCAGTGGGTCACCACAATGATGATGTCCATCACCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 72 bp GAAGTGGAAGACTCGGGCTTTGAGCTCCAGCTCAGCTaGTGTGTCCTCCTCCTTGGTGATGGACATCATCAT +
Preference number: 6 (lower is better)
Translates to: EVEDSGFELQLS*CVLLLGDGHHH
Trigger: ATGATGATGTCCATCACCAAGGAGGAGGACACAGCAGCTGAGCTGGAGCTCAAAGCCCGAGTCTTCCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS GCA 72 bp CACCTCACCCACGTAGTGACCGTGACTGATGTTCTGTaGTTTGATGCTTTTGACACCTGTGGCCTTGCCGAG +
Preference number: 6 (lower is better)
Translates to: HLTHVVTVTDVL*FDAFDTCGLAE
Trigger: CTCGGCAAGGCCACAGGTGTCAAAAGCATCAAAGCACAGAACATCAGTCACGGTCACTACGTGGGTGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507830.1
CDS CCA 72 bp ATGGACATCATCATTGTGGTGACCCACTGCTTCAGCTaGTTGACCTCCCTGTCCATGCGGATCTGGGTGTGT +
Preference number: 6 (lower is better)
Translates to: MDIIIVVTHCFS*LTSLSMRIWVC
Trigger: ACACACCCAGATCCGCATGGACAGGGAGGTCAACCAGCTGAAGCAGTGGGTCACCACAATGATGATGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CAA 72 bp GACATCATCATTGTGGTGACCCACTGCTTCAGCTGGTaGACCTCCCTGTCCATGCGGATCTGGGTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: DIIIVVTHCFSW*TSLSMRIWVCF
Trigger: GAAACACACCCAGATCCGCATGGACAGGGAGGTCAACCAGCTGAAGCAGTGGGTCACCACAATGATGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CAA 90 bp GCCACTCGAGACCCAGCCCAGTCTCTGCTTCCTCTGCCAACATCTTaGCTAAGCCTTCAGCCAGAACAGCTATGGTCTGCGAAGATTAAG +
Preference number: 6 (lower is better)
Translates to: ATRDPAQSLLPLPTS*LSLQPEQLWSAKIK
Trigger: CTTAATCTTCGCAGACCATAGCTGTTCTGGCTGAAGGCTTAGCAAAGATGTTGGCAGAGGAAGCAGAGACTGGGCTGGGTCTCGAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000506204.1
CDS TCA 72 bp TGCTGCTGCCGTTCGGAGAGAGCCTTATTCCGCTCCTaGTCTCTGAGCAAGAAGAAATCCACATCCCCAGAT +
Preference number: 6 (lower is better)
Translates to: CCCRSERALFRS*SLSKKKSTSPD
Trigger: ATCTGGGGATGTGGATTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGCTCTCTCCGAACGGCAGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CCA 72 bp AAATGTTACATTCTCCATGGCCAGAGTCCGGCCGCGTaGGAAGTCCTTACTGTGTCTGACTTGCGCCTTTCT +
Preference number: 6 (lower is better)
Translates to: KCYILHGQSPAA*EVLTVSDLRLS
Trigger: AGAAAGGCGCAAGTCAGACACAGTAAGGACTTCCCACGCGGCCGGACTCTGGCCATGGAGAATGTAACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503905.1
CDS CAA 72 bp CCTTTGTCCCCTGGTGTGGAGTTAACACTGCTCTCTTaGGAAGCCTCGGAGACCTCCTTGGCCTTTTTGAGA +
Preference number: 6 (lower is better)
Translates to: PLSPGVELTLLS*EASETSLAFLR
Trigger: TCTCAAAAAGGCCAAGGAGGTCTCCGAGGCTTCCAAAGAGAGCAGTGTTAACTCCACACCAGGGGACAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CAA 90 bp ATCCCTGGTCCTTTGTCCCCTGGTGTGGAGTTAACACTGCTCTCTTaGGAAGCCTCGGAGACCTCCTTGGCCTTTTTGAGAAACGAGTGT +
Preference number: 6 (lower is better)
Translates to: IPGPLSPGVELTLLS*EASETSLAFLRNEC
Trigger: ACACTCGTTTCTCAAAAAGGCCAAGGAGGTCTCCGAGGCTTCCAAAGAGAGCAGTGTTAACTCCACACCAGGGGACAAAGGACCAGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS TCA 72 bp GCCGTTCGGAGAGAGCCTTATTCCGCTCCTGATCTCTaGGCAAGAAGAAATCCACATCCCCAGATAAGTGGA +
Preference number: 6 (lower is better)
Translates to: AVRREPYSAPDL*ARRNPHPQISG
Trigger: TCCACTTATCTGGGGATGTGGATTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGCTCTCTCCGAACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS TCA 72 bp TCCTGGATACTCACGGAGAGAGCCTTATTCCGCTCCTaGTCTCTGAGCAAGAAGAAATCCACATCCCCAGAT +
Preference number: 6 (lower is better)
Translates to: SWILTERALFRS*SLSKKKSTSPD
Trigger: ATCTGGGGATGTGGATTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGCTCTCTCCGTGAGTATCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510833.5
CDS CAA 72 bp ACGGTATCTCAGACATCTTGGCTGAGGCCCAAGAGGTaGATGCAAGGCTTCTCCTCTTCTAAAGGAGATCCT +
Preference number: 6 (lower is better)
Translates to: TVSQTSWLRPKR*MQGFSSSKGDP
Trigger: AGGATCTCCTTTAGAAGAGGAGAAGCCTTGCATCAACCTCTTGGGCCTCAGCCAAGATGTCTGAGATACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000508140.5
ENST00000510833.5
CDS CAA 72 bp TTCTTGGAGACTATAGTGGACGGTATCTCAGACATCTaGGCTGAGGCCCAAGAGGTTGATGCAAGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: FLETIVDGISDI*AEAQEVDARLL
Trigger: GAGAAGCCTTGCATCAACCTCTTGGGCCTCAGCCAAGATGTCTGAGATACCGTCCACTATAGTCTCCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000508140.5
ENST00000510833.5
CDS TCA 72 bp TACTCACGGAGAGAGCCTTATTCCGCTCCTGATCTCTaGGCAAGAAGAAATCCACATCCCCAGATAAGTGGA +
Preference number: 6 (lower is better)
Translates to: YSRREPYSAPDL*ARRNPHPQISG
Trigger: TCCACTTATCTGGGGATGTGGATTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGCTCTCTCCGTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510833.5
CDS CCA 72 bp TCTCTGAGCAAGAAGAAATCCACATCCCCAGATAAGTaGAAAGGGTTCGCTGAAGGGTCAGGACCATGTTCT +
Preference number: 6 (lower is better)
Translates to: SLSKKKSTSPDK*KGFAEGSGPCS
Trigger: AGAACATGGTCCTGACCCTTCAGCGAACCCTTTCCACTTATCTGGGGATGTGGATTTCTTCTTGCTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000510833.5
CDS TCA 72 bp TCTCTTTGGAAGCCTCGGAGACCTCCTTGGCCTTTTTaGGAAACGAGTGTTTCTTTTCCTGTTCTTCAAGCC +
Preference number: 6 (lower is better)
Translates to: SLWKPRRPPWPF*ETSVSFPVLQA
Trigger: GGCTTGAAGAACAGGAAAAGAAACACTCGTTTCTCAAAAAGGCCAAGGAGGTCTCCGAGGCTTCCAAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CAA 90 bp CTCATGGTCTGTTGTGGGTTGAACTGTGTCATCCCAATTCGTATGTaGAAGTCCCAACCCCTACTGTCTCAGAATGTGATCTTGTTTGGA +
Preference number: 6 (lower is better)
Translates to: LMVCCGLNCVIPIRM*KSQPLLSQNVILFG
Trigger: TCCAAACAAGATCACATTCTGAGACAGTAGGGGTTGGGACTTCAACATACGAATTGGGATGACACAGTTCAACCCACAACAGACCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508140.5
CDS CAA 72 bp ATCCAATGTGATGGGGTCCTGTCATTGGTCATGTTCTaGGAGACTATAGTGGACGGTATCTCAGACATCTTG +
Preference number: 6 (lower is better)
Translates to: IQCDGVLSLVMF*ETIVDGISDIL
Trigger: CAAGATGTCTGAGATACCGTCCACTATAGTCTCCAAGAACATGACCAATGACAGGACCCCATCACATTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508140.5
CDS CAA 72 bp TGTTGTGGGTTGAACTGTGTCATCCCAATTCGTATGTaGAAGTCCCAACCCCTACTGTCTCAGAATGTGATC +
Preference number: 6 (lower is better)
Translates to: CCGLNCVIPIRM*KSQPLLSQNVI
Trigger: GATCACATTCTGAGACAGTAGGGGTTGGGACTTCAACATACGAATTGGGATGACACAGTTCAACCCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508140.5
CDS TCA 72 bp GTTTCTTTGGGTTCTCTTCAGTGCTTGAAGAAGAGCTaGTGTTCATGGATTCCAGGCTGTTCTTGTCATTGG +
Preference number: 6 (lower is better)
Translates to: VSLGSLQCLKKS*CSWIPGCSCHW
Trigger: CCAATGACAAGAACAGCCTGGAATCCATGAACATCAGCTCTTCTTCAAGCACTGAAGAGAACCCAAAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000510833.5
CDS TCA 72 bp TTTTCTTGCCTGTTTCTTTGGGTTCTCTTCAGTGCTTaGAGAAGAGCTGATGTTCATGGATTCCAGGCTGTT +
Preference number: 6 (lower is better)
Translates to: FSCLFLWVLFSA*RRADVHGFQAV
Trigger: AACAGCCTGGAATCCATGAACATCAGCTCTTCTTCAAGCACTGAAGAGAACCCAAAGAAACAGGCAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352312.6
ENST00000505024.1
ENST00000510833.5
CDS CCA 72 bp TCAAATCTGGAGATCTCACTTTTGATATTAACAATCTaGGTGGTGAGGTCCCGGATCTCAAGGATCTTCTCT +
Preference number: 6 (lower is better)
Translates to: SNLEISLLILTI*VVRSRISRIFS
Trigger: AGAGAAGATCCTTGAGATCCGGGACCTCACCACCCAGATTGTTAATATCAAAAGTGAGATCTCCAGATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352312.6
ENST00000505024.1
CDS CAA 72 bp AGGCAAAGGGTCTCTTTCTCAAAATATCTTGCTGTATaGTACTCACCTACTTTCAGCTCCGGCAACTTTGGT +
Preference number: 6 (lower is better)
Translates to: RQRVSFSKYLAV*YSPTFSSGNFG
Trigger: ACCAAAGTTGCCGGAGCTGAAAGTAGGTGAGTACAATACAGCAAGATATTTTGAGAAAGAGACCCTTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533201.1
CDS CAA 72 bp TTGAAGTCCCAACCCCTACTGTCTCAGAATGTGATCTaGTTTGGAAATAAGGTCTTTGCAGCTGTAATTCAC +
Preference number: 6 (lower is better)
Translates to: LKSQPLLSQNVI*FGNKVFAAVIH
Trigger: GTGAATTACAGCTGCAAAGACCTTATTTCCAAACAAGATCACATTCTGAGACAGTAGGGGTTGGGACTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508140.5
CDS CAA 90 bp ATAAAAGTTAGGCAAAGGGTCTCTTTCTCAAAATATCTTGCTGTATaGTACTCACCTACTTTCAGCTCCGGCAACTTTGGTCAAGGTGAG +
Preference number: 6 (lower is better)
Translates to: IKVRQRVSFSKYLAV*YSPTFSSGNFGQGE
Trigger: CTCACCTTGACCAAAGTTGCCGGAGCTGAAAGTAGGTGAGTACAATACAGCAAGATATTTTGAGAAAGAGACCCTTTGCCTAACTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533201.1