RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CETP (Homo sapiens)

Ensembl gene IDs: ENSG00000087237

Ensembl transcript IDs: ENST00000200676.8, ENST00000379780.6, ENST00000566128.1, ENST00000569082.1, ENST00000650358.1

Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACCCAACTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTaGGCCTGGTGCTTGCCTTCTGCTACAAGCCCCATCCCGACCTCC +
Preference number: 1 (lower is better)
Translates to: NPTSTTLEETPGFQL*AWCLPSATSPIPTS
Trigger: GGAGGTCGGGATGGGGCTTGTAGCAGAAGGCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAGTTGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
3UTR-3UTR GCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCCTGGTGCTTGCCTTCTaGTACAAGCCCCATCCCGAC +
Preference number: 2 (lower is better)
Translates to: RSWEPISISVLLTQLPPRLVLAF*YKPHPD
Trigger: GTCGGGATGGGGCTTGTAGCAGAAGGCAAGCACCAG...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
3UTR-3UTR GCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTGGTGCTTGCCTTCTaGTACAAGCCCCATCCCGAC +
Preference number: 2 (lower is better)
Translates to: QWAFRIGRSWEPISISVLLVLAF*YKPHPD
Trigger: GTCGGGATGGGGCTTGTAGCAGAAGGCAAGCACCAG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
3UTR-3UTR GCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACTGGTGCTTGCCTTCTaGTACAAGCCCCATCCCGAC +
Preference number: 2 (lower is better)
Translates to: WAFRIGRSWEPISISVLLLVLAF*YKPHPD
Trigger: GTCGGGATGGGGCTTGTAGCAGAAGGCAAGCACCAG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
3UTR-3UTR GCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCTGTGAGCCTGGTGCTTaGCTTCTGCTACAAGCCCCA +
Preference number: 2 (lower is better)
Translates to: RSWEPISISVLLTQLPPRCEPGA*LLLQAP
Trigger: TGGGGCTTGTAGCAGAAGGCAAGCACCAGGCTCACA...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
3UTR-3UTR GCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCATGTGAGCCTGGTGCTTaGCTTCTGCTACAAGCCCCA +
Preference number: 2 (lower is better)
Translates to: IGRSWEPISISVLLTQLPCEPGA*LLLQAP
Trigger: TGGGGCTTGTAGCAGAAGGCAAGCACCAGGCTCACA...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
3UTR TCA 72 bp TCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTaGGCCTGGTGCTTGCCTTCTGCTACAAGCCCCATC +
Preference number: 3 (lower is better)
Translates to: STTLEETPGFQL*AWCLPSATSPI
Trigger: GATGGGGCTTGTAGCAGAAGGCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCCAGTGGACGGTGACTTaGGCCTGGCTGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACQWTVT*AWLGKP
Trigger: CGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTG...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCCCAGCTCCACCTGGCTaGTGGCGATGGACAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACPAPPG*WRWTSG
Trigger: GCCACTTGTCCATCGCCAGCAGCCAGGTGGAGCTGG...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCCGCTGGAAGGCGGTCTaGATCACCTTGGCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACRWKAV*ITLAVS
Trigger: CGAGACTGCCAAGGTGATCCAGACCGCCTTCCAGCG...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGGATGCCCACAGCGGTaGTCATTGACTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACGCPQR*SLTAGS
Trigger: GCTTCCTGCAGTCAATGATCACCGCTGTGGGCATCC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCCCAGGTCTCCAGCACTaGCTTGTGATGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACPGLQH*LVMGLQ
Trigger: CTGGAGTCCCATCACAAGGCAGTGCTGGAGACCTGG...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379780.6
CDS-3UTR CCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGGCTCTCGCTCCCCTTaGAGATGCAGGAGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACGSRSP*RCRSSL
Trigger: TAAGCTGCTCCTGCATCTCCAAGGGGAGCGAGAGCC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAGGAGGGCAGGCTTGGTaGTGCGGCACACGATGCCTG +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVGGQAW*CGTRCL
Trigger: CAGGCATCGTGTGCCGCATCACCAAGCCTGCCCTCC...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR TCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCGGAGGGCAGGCTTGGTaGTGCGGCACACGATGCCTG +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLGGQAW*CGTRCL
Trigger: CAGGCATCGTGTGCCGCATCACCAAGCCTGCCCTCC...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR TCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCCCCAATGTCTCCATCTaGAAGGATGCTGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACPNVSI*KDAGSP
Trigger: AGGGCTGCCAGCATCCTTTCAGATGGAGACATTGGG...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCTTTCCTGGTTGGTGTTaGAGCCCCAGGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACFPGWC*SPRSPA
Trigger: TGCTGGAGACCTGGGGCTTCAACACCAACCAGGAAA...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCTGTGAGCCTGGTGCTTaGCTTCTGCTACAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACCEPGA*LLLQAP
Trigger: TGGGGCTTGTAGCAGAAGGCAAGCACCAGGCTCACA...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCCCTGGAAAGCTACCTTaGCCAGCGAGTGGAAGACTC +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACPGKLP*PASGRL
Trigger: GAGTCTTCCACTCGCTGGCCAAGGTAGCTTTCCAGG...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAGGGCACTCCTCTCTCTaGGCTAGTGTGGCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVGHSSL*ASVAAG
Trigger: GCCGGCTGCCACACTAGCCCAGAGAGAGGAGTGCCC...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566128.1
CDS-3UTR TCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCAGGTCAGCTGTGTGTTaGTCTGGAGGTCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACRSAVC*SGGQWQ
Trigger: CTGCCATTGACCTCCAGATCAACACACAGCTGACCT...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCCTCGAGCCGAGACATaGCCTCAGGGATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLPRAET*PQGCPQ
Trigger: CTGTGGGCATCCCTGAGGTCATGTCTCGGCTCGAGG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAAGCAGGCATGGGCATTaGCCAGCAGGGCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVSRHGH*PAGPGS
Trigger: TGACCCTGGCCCTGCTGGGCAATGCCCATGCCTGCT...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR GCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCAGCAGGCATGGGCATTaGCCAGCAGGGCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLSRHGH*PAGPGS
Trigger: TGACCCTGGCCCTGCTGGGCAATGCCCATGCCTGCT...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR GCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCGCGGCACACGATGCCTaGCTCGTGCGAGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLAAHDA*LVRGAF
Trigger: AAAGGCACCTCGCACGAGGCAGGCATCGTGTGCCGC...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR GCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCGCGGCACACGATGCCTaGCTCGTGCGAGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRAAHDA*LVRGAF
Trigger: AAAGGCACCTCGCACGAGGCAGGCATCGTGTGCCGC...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR GCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCAAATCCACCAGCAGGTaGTCAGGGAAGCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACKSTSR*SGKPKS
Trigger: GGACTTTGGCTTCCCTGAGCACCTGCTGGTGGATTT...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACGGTGACTTGGGCCTaGCTGGGGAAGCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSTVTWA*LGKPPT
Trigger: TGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGT...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACGGTGACTTGGGCCTaGCTGGGGAAGCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLTVTWA*LGKPPT
Trigger: TGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGT...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACAGTGGACGGTGACTTaGGCCTGGCTGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLQWTVT*AWLGKP
Trigger: CGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAGCCGGCTTCAGGGCTaGCTTCAGGCCAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSSRLQG*LQAREA
Trigger: AGCCTCCCTGGCCTGAAGCCAGCCCTGAAGCCGGCT...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566128.1
CDS-3UTR TCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTATGGCCTTCTCGCCCGTaGTATCTGGGTAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVWPSRP*YLGSWL
Trigger: GAGCCAGCTACCCAGATATCACGGGCGAGAAGGCCA...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGAGGGGGAGGTCCTCTaGGACATTCTTGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACEGEVL*DILVDE
Trigger: TTCATCTACAAGAATGTCTCAGAGGACCTCCCCCTC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR TCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACCTCGAGCCGAGACATaGCCTCAGGGATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLPRAET*PQGCPQ
Trigger: CTGTGGGCATCCCTGAGGTCATGTCTCGGCTCGAGG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCCTCGAGCCGAGACATaGCCTCAGGGATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSPRAET*PQGCPQ
Trigger: CTGTGGGCATCCCTGAGGTCATGTCTCGGCTCGAGG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCTGCCTCGTGCGAGGTaGCTTTGGAGCAGGCATGGG +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSLPRAR*LWSRHG
Trigger: CCCATGCCTGCTCCAAAGGCACCTCGCACGAGGCAG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR GCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCACGATGCCTGCCTCGTaGGAGGTGCCTTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLTMPAS*EVPLEQ
Trigger: CTGCTCCAAAGGCACCTCGCACGAGGCAGGCATCGT...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR GCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACCAGCTCCACCTGGCTaGTGGCGATGGACAAGTGGC +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLPAPPG*WRWTSG
Trigger: GCCACTTGTCCATCGCCAGCAGCCAGGTGGAGCTGG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCCAGCTCCACCTGGCTaGTGGCGATGGACAAGTGGC +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSPAPPG*WRWTSG
Trigger: GCCACTTGTCCATCGCCAGCAGCCAGGTGGAGCTGG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCAAGCCAAAGTCCATCTaGAGCAGCAGGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACKPKSI*SSRKPS
Trigger: AGATGGCTTCCTGCTGCTGCAGATGGACTTTGGCTT...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCCGTGCGAGGTGCCTTTaGAGCAGGCATGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRRARCL*SRHGHC
Trigger: GCAATGCCCATGCCTGCTCCAAAGGCACCTCGCACG...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACGTGCGAGGTGCCTTTaGAGCAGGCATGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVRARCL*SRHGHC
Trigger: GCAATGCCCATGCCTGCTCCAAAGGCACCTCGCACG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR CCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCTCCACCAGCTCCACCTaGCTGCTGGCGATGGACAAG +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRSTSST*LLAMDK
Trigger: CTTGTCCATCGCCAGCAGCCAGGTGGAGCTGGTGGA...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTATCCACCAGCTCCACCTaGCTGCTGGCGATGGACAAG +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVSTSST*LLAMDK
Trigger: CTTGTCCATCGCCAGCAGCCAGGTGGAGCTGGTGGA...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCAGCTGTGTGTTGATCTaGAGGTCAATGGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACSCVLI*RSMAES
Trigger: CGACTCTGCCATTGACCTCCAGATCAACACACAGCT...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAACGGTGACTTGGGCCTaGCTGGGGAAGCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPTVTWA*LGKPPT
Trigger: TGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGT...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACAGTGGACGGTGACTTaGGCCTGGCTGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPQWTVT*AWLGKP
Trigger: CGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTG...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCGGCATCTTGAGGCAGTaGACGGTGACTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLGILRQ*TVTWAW
Trigger: CCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCC...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCGGCATCTTGAGGCAGTaGACGGTGACTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRGILRQ*TVTWAW
Trigger: CCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCC...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCGCAGTGGTGTGTAAGTaGCCCGAGCCGTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRAVVCK*PEPFSL
Trigger: CAGGCTGAACGGCTCGGGCCACTTACACACCACTGC...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379780.6
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCTCTCTGGGCTAGTGTaGCAGCCGGCTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSLSGLV*QPASGL
Trigger: CAGCCCTGAAGCCGGCTGCCACACTAGCCCAGAGAG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566128.1
CDS-3UTR TCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTATGGCCTTCTCGCCCGTaGTATCTGGGTAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLWPSRP*YLGSWL
Trigger: GAGCCAGCTACCCAGATATCACGGGCGAGAAGGCCA...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTATCTCCAGCACTGCCTTaGACTCGTCTCCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVSPALP*TRLPSG
Trigger: GCCTGATGGGAGACGAGTTCAAGGCAGTGCTGGAGA...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR TCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCGGATGCCCACAGCGGTaGTCATTGACTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLGCPQR*SLTAGS
Trigger: GCTTCCTGCAGTCAATGATCACCGCTGTGGGCATCC...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAGGATGCCCACAGCGGTaGTCATTGACTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVGCPQR*SLTAGS
Trigger: GCTTCCTGCAGTCAATGATCACCGCTGTGGGCATCC...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACTGCCTCGTGCGAGGTaGCTTTGGAGCAGGCATGGG +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPLPRAR*LWSRHG
Trigger: CCCATGCCTGCTCCAAAGGCACCTCGCACGAGGCAG...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR GCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAACCAGAAGTACAGCATaGGGGAGTCCCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVTRSTA*GSPPAV
Trigger: CACTGCTGGGGGACTCCCGCATGCTGTACTTCTGGT...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR GCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTGGTGCTTGCCTTCTaGTACAAGCCCCATCCCGAC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVLVLAF*YKPHPD
Trigger: GTCGGGATGGGGCTTGTAGCAGAAGGCAAGCACCAG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCGCTGGAAGGCGGTCTaGATCACCTTGGCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSRWKAV*ITLAVS
Trigger: CGAGACTGCCAAGGTGATCCAGACCGCCTTCCAGCG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTCGCCCGTGATATCTaGGTAGCTGGCTCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLLARDI*VAGSLE
Trigger: TTCCAGCGAGCCAGCTACCCAGATATCACGGGCGAG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGACAAGTGGCTGATCTaGATGTTGTGCAACCCATAC +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACDKWLI*MLCNPY
Trigger: GTATGGGTTGCACAACATCCAGATCAGCCACTTGTC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTATCCACCAGCTCCACCTaGCTGCTGGCGATGGACAAG +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLSTSST*LLAMDK
Trigger: CTTGTCCATCGCCAGCAGCCAGGTGGAGCTGGTGGA...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGAATGGAGACATCAATaGACTTGGCTTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACEWRHQ*TWLPPA
Trigger: AGCTGGTGGAAGCCAAGTCCATTGATGTCTCCATTC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAGGCTCTCGCTCCCCTTaGAGATGCAGGAGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVGSRSP*RCRSSL
Trigger: TAAGCTGCTCCTGCATCTCCAAGGGGAGCGAGAGCC...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAATGAGGCGGCCATCCTaGAAAGCTACCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVMRRPS*KATLAS
Trigger: GCTGGCCAAGGTAGCTTTCCAGGATGGCCGCCTCAT...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCGGCATCTTGAGGCAGTaGACGGTGACTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSGILRQ*TVTWAW
Trigger: CCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCC...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACAACTTCCACCACGCTaGAGGAGACACCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVQLPPR*RRHQGS
Trigger: GGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAGTTG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCAACTTCCACCACGCTaGAGGAGACACCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLQLPPR*RRHQGS
Trigger: GGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAGTTG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCACCTTGGCAGTCTCGTaGTTCACAAAGAACTTGACC +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACTLAVS*FTKNLT
Trigger: GGTCAAGTTCTTTGTGAACCACGAGACTGCCAAGGT...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566128.1
CDS-3UTR TCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACCCAATGTCTCCATCTaGAAGGATGCTGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVPNVSI*KDAGSP
Trigger: AGGGCTGCCAGCATCCTTTCAGATGGAGACATTGGG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTATCTCCAGCACTGCCTTaGACTCGTCTCCCATCAGGC +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLSPALP*TRLPSG
Trigger: GCCTGATGGGAGACGAGTTCAAGGCAGTGCTGGAGA...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR TCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCTTTCCTGGTTGGTGTTaGAGCCCCAGGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLFPGWC*SPRSPA
Trigger: TGCTGGAGACCTGGGGCTTCAACACCAACCAGGAAA...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCTTTCCTGGTTGGTGTTaGAGCCCCAGGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRFPGWC*SPRSPA
Trigger: TGCTGGAGACCTGGGGCTTCAACACCAACCAGGAAA...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCCCATCACTGAAGAATTaGCCACGACTCCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACPSLKN*PRLPCF
Trigger: AAAACAAGGGAGTCGTGGTCAATTCTTCAGTGATGG...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGAATTTCACCATCACTaGAGAATTGACCACGACTCC +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACEFHHH*RIDHDS
Trigger: GGAGTCGTGGTCAATTCTTCAGTGATGGTGAAATTC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCACAGCGGTGATCATTaGCTGCAGGAAGCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLHSGDH*LQEALD
Trigger: GTCCAGAGCTTCCTGCAGTCAATGATCACCGCTGTG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACACAGCGGTGATCATTaGCTGCAGGAAGCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVHSGDH*LQEALD
Trigger: GTCCAGAGCTTCCTGCAGTCAATGATCACCGCTGTG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCAAATTTGTGAACAGCTaGTTGATCCACCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACKFVNS*LIHPGS
Trigger: AGAGCCTGGGTGGATCAAGCAGCTGTTCACAAATTT...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCGCGGTGATCATTGACTaGAGGAAGCTCTGGACGGAC +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRAVIID*RKLWTD
Trigger: GTCCGTCCAGAGCTTCCTGCAGTCAATGATCACCGC...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAGCGGTGATCATTGACTaGAGGAAGCTCTGGACGGAC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVAVIID*RKLWTD
Trigger: GTCCGTCCAGAGCTTCCTGCAGTCAATGATCACCGC...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCTGGTGCTTGCCTTCTaGTACAAGCCCCATCCCGAC +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSLVLAF*YKPHPD
Trigger: GTCGGGATGGGGCTTGTAGCAGAAGGCAAGCACCAG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACTCGCCCGTGATATCTaGGTAGCTGGCTCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLLARDI*VAGSLE
Trigger: TTCCAGCGAGCCAGCTACCCAGATATCACGGGCGAG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACCAGCCACCAGGCAGTaGTGTAGCCATACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLPATRQ*CSHTSG
Trigger: CCCTGAAGTATGGCTACACCACTGCCTGGTGGCTGG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAGGCTCTCGCTCCCCTTaGAGATGCAGGAGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLGSRSP*RCRSSL
Trigger: TAAGCTGCTCCTGCATCTCCAAGGGGAGCGAGAGCC...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCCTGGAAAGCTACCTTaGCCAGCGAGTGGAAGACTC +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLPGKLP*PASGRL
Trigger: GAGTCTTCCACTCGCTGGCCAAGGTAGCTTTCCAGG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACAACTTCCACCACGCTaGAGGAGACACCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLQLPPR*RRHQGS
Trigger: GGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAGTTG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACGATGGACAAGTGGCTaGTCTGGATGTTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVRWTSG*SGCCAT
Trigger: GGTTGCACAACATCCAGATCAGCCACTTGTCCATCG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCCGATGGACAAGTGGCTaGTCTGGATGTTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRRWTSG*SGCCAT
Trigger: GGTTGCACAACATCCAGATCAGCCACTTGTCCATCG...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCACAGCGGTGATCATTaGCTGCAGGAAGCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSHSGDH*LQEALD
Trigger: GTCCAGAGCTTCCTGCAGTCAATGATCACCGCTGTG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCGCTCCCCTTGGAGATaGAGGAGCAGCTTATGGAAA +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLRSPWR*RSSLWK
Trigger: TTTCCATAAGCTGCTCCTGCATCTCCAAGGGGAGCG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCCTCCATCTGAAAGGATaGTGGCAGCCCTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRLHLKG*WQPLSG
Trigger: TCCAGACAAGGGCTGCCAGCATCCTTTCAGATGGAG...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAACCAGAAGTACAGCATaGGGGAGTCCCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPTRSTA*GSPPAV
Trigger: CACTGCTGGGGGACTCCCGCATGCTGTACTTCTGGT...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR GCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCGCGGTGATCATTGACTaGAGGAAGCTCTGGACGGAC +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSAVIID*RKLWTD
Trigger: GTCCGTCCAGAGCTTCCTGCAGTCAATGATCACCGC...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCAAATCCACCAGCAGGTaGTCAGGGAAGCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRKSTSR*SGKPKS
Trigger: GGACTTTGGCTTCCCTGAGCACCTGCTGGTGGATTT...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTATGTGAGCCTGGTGCTTaGCTTCTGCTACAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLCEPGA*LLLQAP
Trigger: TGGGGCTTGTAGCAGAAGGCAAGCACCAGGCTCACA...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCTGTGGCAGCCAGCATaGTTATCAGGCAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSLWQPA*LSGSGV
Trigger: CACACCACTGCCTGATAACCATGCTGGCTGCCACAG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCTTGGCAGTCTCGTaGTTCAACACCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLTLAVS*FNTRRA
Trigger: TGCCCTCCTGGTGTTGAACCACGAGACTGCCAAGGT...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR CCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCGGTCTGGATCACCTTaGCAGTCTCGTGGTTCAACA +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLRSGSP*QSRGST
Trigger: TGTTGAACCACGAGACTGCCAAGGTGATCCAGACCG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR CCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCCGGTCTGGATCACCTTaGCAGTCTCGTGGTTCAACA +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRRSGSP*QSRGST
Trigger: TGTTGAACCACGAGACTGCCAAGGTGATCCAGACCG...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR CCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACTCGCCCGTGATATCTaGGTAGCTGGCTCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPLARDI*VAGSLE
Trigger: TTCCAGCGAGCCAGCTACCCAGATATCACGGGCGAG...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTGGCGATGGACAAGTaGCTGATCTGGATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLLAMDK*LIWMLC
Trigger: GCACAACATCCAGATCAGCCACTTGTCCATCGCCAG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCAGCCACCAGGCAGTaGTGTAGCCATACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPPATRQ*CSHTSG
Trigger: CCCTGAAGTATGGCTACACCACTGCCTGGTGGCTGG...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAATGAGGCGGCCATCCTaGAAAGCTACCTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPMRRPS*KATLAS
Trigger: GCTGGCCAAGGTAGCTTTCCAGGATGGCCGCCTCAT...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACCGCCGACAACCTCTTaGAAGATTTCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVPPTTS*KISWLV
Trigger: CACCAACCAGGAAATCTTCCAAGAGGTTGTCGGCGG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCCGCCGACAACCTCTTaGAAGATTTCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLPPTTS*KISWLV
Trigger: CACCAACCAGGAAATCTTCCAAGAGGTTGTCGGCGG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCGCTACAGAATGTTGCTaGTCTGGGCGTGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRATECC*SGRGKR
Trigger: CCTCTTTCCACGCCCAGACCAGCAACATTCTGTAGC...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAGCTACAGAATGTTGCTaGTCTGGGCGTGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVATECC*SGRGKR
Trigger: CCTCTTTCCACGCCCAGACCAGCAACATTCTGTAGC...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACCATCCCGACCTCCTTaGAGACTTCTAGCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVPSRPP*RLLAQA
Trigger: AGCTTGAGCTAGAAGTCTCCAAGGAGGTCGGGATGG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCGGTCTGGATCACCTTaGCAGTCTCGTGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLRSGSP*QSRGSQ
Trigger: TTGTGAACCACGAGACTGCCAAGGTGATCCAGACCG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566128.1
CDS-3UTR TCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACGATGGACAAGTGGCTaGTCTGGATGTTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLRWTSG*SGCCAT
Trigger: GGTTGCACAACATCCAGATCAGCCACTTGTCCATCG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACTTCAGGGTCCCCTTaGAGACCACAGACACGTTCT +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSTSGSP*RPQTRS
Trigger: AGAACGTGTCTGTGGTCTTCAAGGGGACCCTGAAGT...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCCAATGTCTCCATCTaGAAGGATGCTGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPPNVSI*KDAGSP
Trigger: AGGGCTGCCAGCATCCTTTCAGATGGAGACATTGGG...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCGCTCCCCTTGGAGATaGAGGAGCAGCTTATGGAAA +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSRSPWR*RSSLWK
Trigger: TTTCCATAAGCTGCTCCTGCATCTCCAAGGGGAGCG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACGCTCCCCTTGGAGATaGAGGAGCAGCTTATGGAAA +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLRSPWR*RSSLWK
Trigger: TTTCCATAAGCTGCTCCTGCATCTCCAAGGGGAGCG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCTCCATCTGAAAGGATaGTGGCAGCCCTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSLHLKG*WQPLSG
Trigger: TCCAGACAAGGGCTGCCAGCATCCTTTCAGATGGAG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACTCCATCTGAAAGGATaGTGGCAGCCCTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLLHLKG*WQPLSG
Trigger: TCCAGACAAGGGCTGCCAGCATCCTTTCAGATGGAG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAAAGCCAAAGTCCATCTaGAGCAGCAGGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVKPKSI*SSRKPS
Trigger: AGATGGCTTCCTGCTGCTGCAGATGGACTTTGGCTT...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACTGTGGCAGCCAGCATaGTTATCAGGCAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPLWQPA*LSGSGV
Trigger: CACACCACTGCCTGATAACCATGCTGGCTGCCACAG...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCTGGCGATGGACAAGTaGCTGATCTGGATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSLAMDK*LIWMLC
Trigger: GCACAACATCCAGATCAGCCACTTGTCCATCGCCAG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACTGGCGATGGACAAGTaGCTGATCTGGATGTTGTGC +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLLAMDK*LIWMLC
Trigger: GCACAACATCCAGATCAGCCACTTGTCCATCGCCAG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCAGACATCAATGGACTTaGCTTCCACCAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRRHQWT*LPPAPP
Trigger: AGGTGGAGCTGGTGGAAGCCAAGTCCATTGATGTCT...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCACGACTCCCTTGTTTTaGCAGGAGATCTTGGGCATC +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLTTPLF*QEILGI
Trigger: GATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGT...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAACGACTCCCTTGTTTTaGCAGGAGATCTTGGGCATC +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVTTPLF*QEILGI
Trigger: GATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGT...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCGCTACAGAATGTTGCTaGTCTGGGCGTGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSATECC*SGRGKR
Trigger: CCTCTTTCCACGCCCAGACCAGCAACATTCTGTAGC...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGTCTTTGGTGTAATCTaGAAATCCAAGAGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACVFGVI*KSKRLK
Trigger: CTTAAGCCTCTTGGATTTCCAGATTACACCAAAGAC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACCATCCCGACCTCCTTaGAGACTTCTAGCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLPSRPP*RLLAQA
Trigger: AGCTTGAGCTAGAAGTCTCCAAGGAGGTCGGGATGG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCATGGTTATCAGGCAGTaGTGTGTAAGTGGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSMVIRQ*CVSGPS
Trigger: GCTCGGGCCACTTACACACCACTGCCTGATAACCAT...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379780.6
CDS-3UTR TCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCTGTGCAACCCATACTTaGCTTGGCCAAGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSCATHT*LGQGAS
Trigger: TGATGCTCCTTGGCCAAGTCAAGTATGGGTTGCACA...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCACCACAGACACGTTCTaGATGGAGACATCAATGGAC +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLTTDTF*METSMD
Trigger: GTCCATTGATGTCTCCATTCAGAACGTGTCTGTGGT...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAACTTCAGGGTCCCCTTaGAGACCACAGACACGTTCT +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPTSGSP*RPQTRS
Trigger: AGAACGTGTCTGTGGTCTTCAAGGGGACCCTGAAGT...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAAGGTCAGCTGTGTGTTaGTCTGGAGGTCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPRSAVC*SGGQWQ
Trigger: CTGCCATTGACCTCCAGATCAACACACAGCTGACCT...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCGAGGGGGAGGTCCTCTaGGACATTCTTGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSEGEVL*DILVDE
Trigger: TTCATCTACAAGAATGTCTCAGAGGACCTCCCCCTC...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR GCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAAAATCCACCAGCAGGTaGTCAGGGAAGCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPKSTSR*SGKPKS
Trigger: GGACTTTGGCTTCCCTGAGCACCTGCTGGTGGATTT...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAAGACATCAATGGACTTaGCTTCCACCAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLRHQWT*LPPAPP
Trigger: AGGTGGAGCTGGTGGAAGCCAAGTCCATTGATGTCT...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAGACATCAATGGACTTaGCTTCCACCAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSRHQWT*LPPAPP
Trigger: AGGTGGAGCTGGTGGAAGCCAAGTCCATTGATGTCT...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCGAATGGAGACATCAATaGACTTGGCTTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLEWRHQ*TWLPPA
Trigger: AGCTGGTGGAAGCCAAGTCCATTGATGTCTCCATTC...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAGAATGGAGACATCAATaGACTTGGCTTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVEWRHQ*TWLPPA
Trigger: AGCTGGTGGAAGCCAAGTCCATTGATGTCTCCATTC...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCCGATCTCGAAGTCAATaGACTGATCAATACCCAGCC +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRRSRSQ*TDQYPA
Trigger: GGCTGGGTATTGATCAGTCCATTGACTTCGAGATCG...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCGCCGACAACCTCTTaGAAGATTTCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPPPTTS*KISWLV
Trigger: CACCAACCAGGAAATCTTCCAAGAGGTTGTCGGCGG...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCATCCCGACCTCCTTaGAGACTTCTAGCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPPSRPP*RLLAQA
Trigger: AGCTTGAGCTAGAAGTCTCCAAGGAGGTCGGGATGG...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACAGACACGTTCTaGATGGAGACATCAATGGAC +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSTTDTF*METSMD
Trigger: GTCCATTGATGTCTCCATTCAGAACGTGTCTGTGGT...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCACAGACACGTTCTaGATGGAGACATCAATGGAC +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLTTDTF*METSMD
Trigger: GTCCATTGATGTCTCCATTCAGAACGTGTCTGTGGT...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACCATCACTGAAGAATTaGCCACGACTCCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVPSLKN*PRLPCF
Trigger: AAAACAAGGGAGTCGTGGTCAATTCTTCAGTGATGG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCGAATTTCACCATCACTaGAGAATTGACCACGACTCC +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLEFHHH*RIDHDS
Trigger: GGAGTCGTGGTCAATTCTTCAGTGATGGTGAAATTC...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCCTGATCTGGATGTTGTaGAACCCATACTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: RSWEPISISVLLTQLPPRLIWML*NPYLTW
Trigger: CCAAGTCAAGTATGGGTTGCACAACATCCAGATCAG...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCAAATTTGTGAACAGCTaGTTGATCCACCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QWAFRIGRSWEPISISVLKFVNS*LIHPGS
Trigger: AGAGCCTGGGTGGATCAAGCAGCTGTTCACAAATTT...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAAAGCCAAAGTCCATCTaGAGCAGCAGGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPKPKSI*SSRKPS
Trigger: AGATGGCTTCCTGCTGCTGCAGATGGACTTTGGCTT...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAGACAAGTGGCTGATCTaGATGTTGTGCAACCCATAC +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLDKWLI*MLCNPY
Trigger: GTATGGGTTGCACAACATCCAGATCAGCCACTTGTC...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCGACAAGTGGCTGATCTaGATGTTGTGCAACCCATAC +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSDKWLI*MLCNPY
Trigger: GTATGGGTTGCACAACATCCAGATCAGCCACTTGTC...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACAGACACGTTCTGAATaGAGACATCAATGGACTTGG +
Preference number: 4 (lower is better)
Translates to: CQWAFRIGRSWEPISISVQTRSE*RHQWTW
Trigger: CCAAGTCCATTGATGTCTCCATTCAGAACGTGTCTG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCGATCTCGAAGTCAATaGACTGATCAATACCCAGCC +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSRSRSQ*TDQYPA
Trigger: GGCTGGGTATTGATCAGTCCATTGACTTCGAGATCG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAACGACTCCCTTGTTTTaGCAGGAGATCTTGGGCATC +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPTTPLF*QEILGI
Trigger: GATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGT...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR TCA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCGAATTTCACCATCACTaGAGAATTGACCACGACTCC +
Preference number: 4 (lower is better)
Translates to: DREELGANLHLRTPNPTSEFHHH*RIDHDS
Trigger: GGAGTCGTGGTCAATTCTTCAGTGATGGTGAAATTC...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACAGACACGTTCTGAATaGAGACATCAATGGACTTGG +
Preference number: 4 (lower is better)
Translates to: WAFRIGRSWEPISISVLLQTRSE*RHQWTW
Trigger: CCAAGTCCATTGATGTCTCCATTCAGAACGTGTCTG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACGATCTCGAAGTCAATaGACTGATCAATACCCAGCC +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPRSRSQ*TDQYPA
Trigger: GGCTGGGTATTGATCAGTCCATTGACTTCGAGATCG...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR GCA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACTGATCTGGATGTTGTaGAACCCATACTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: IGRSWEPISISVLLTQLPLIWML*NPYLTW
Trigger: CCAAGTCAAGTATGGGTTGCACAACATCCAGATCAG...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CCA 90 bp CTCAGCCCATCTCCCTCCCAGGGCACTCCTCTCTCTGGGCTAGTGTaGCAGCCGGCTTCAGGGCTGGCTTCAGGCCAGGGAGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LSPSPSQGTPLSGLV*QPASGLASGQGGSW
Trigger: CCAGGAGCCTCCCTGGCCTGAAGCCAGCCCTGAAGCCGGCTGCCACACTAGCCCAGAGAGAGGAGTGCCCTGGGAGGGAGATGGGCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566128.1
CDS GCA 90 bp ACCAGGAGGGCAGGCTTGGTGATGCGGCACACGATGCCTGCCTCGTaGGAGGTGCCTTTGGAGCAGGCATGGGCATTGCCCAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TRRAGLVMRHTMPAS*EVPLEQAWALPSRA
Trigger: GGCCCTGCTGGGCAATGCCCATGCCTGCTCCAAAGGCACCTCGCACGAGGCAGGCATCGTGTGCCGCATCACCAAGCCTGCCCTCCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000569082.1
CDS CCA 90 bp GGCAGGAAAGGAGGCCAGAGGCAGTGCCTCCTTCCAGCTGCGTGGTaGTGGCAGTGCTGGGGACCGGCACAGGGGACTGTCCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GRKGGQRQCLLPAAW*WQCWGPAQGTVPSG
Trigger: TCCTGAAGGGACAGTCCCCTGTGCCGGTCCCCAGCACTGCCACCACCACGCAGCTGGAAGGAGGCACTGCCTCTGGCCTCCTTTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569082.1
CDS CCA 90 bp AGGAAAGGAGGCCAGAGGCAGTGCCTCCTTCCAGCTGCGTGGTGGTaGCAGTGCTGGGGACCGGCACAGGGGACTGTCCCTTCAGGACCA +
Preference number: 5 (lower is better)
Translates to: RKGGQRQCLLPAAWW*QCWGPAQGTVPSGP
Trigger: TGGTCCTGAAGGGACAGTCCCCTGTGCCGGTCCCCAGCACTGCCACCACCACGCAGCTGGAAGGAGGCACTGCCTCTGGCCTCCTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569082.1
CDS GCA 90 bp GTTCAACACCAGGAGGGCAGGCTTGGTGATGCGGCACACGATGCCTaGCTCGTGCGAGGTGCCTTTGGAGCAGGCATGGGCATTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VQHQEGRLGDAAHDA*LVRGAFGAGMGIAQ
Trigger: CTGGGCAATGCCCATGCCTGCTCCAAAGGCACCTCGCACGAGGCAGGCATCGTGTGCCGCATCACCAAGCCTGCCCTCCTGGTGTTGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000569082.1
CDS CCA 90 bp GGCCAAGATAAGGAATGCGCAGGCAGCCAGCGGGGCTGGGGAGTGTaGCCTGAGGACCTTCGATTACAGCCTGTGGGACTGGGCTCAAGG +
Preference number: 5 (lower is better)
Translates to: GQDKECAGSQRGWGV*PEDLRLQPVGLGSR
Trigger: CCTTGAGCCCAGTCCCACAGGCTGTAATCGAAGGTCCTCAGGCCACACTCCCCAGCCCCGCTGGCTGCCTGCGCATTCCTTATCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS TCA 90 bp TCACCTTGGCAGTCTCGTGGTTCAACACCAGGAGGGCAGGCTTGGTaGTGCGGCACACGATGCCTGCCTCGTGCGAGGTGCCTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: SPWQSRGSTPGGQAW*CGTRCLPRARCLWS
Trigger: GCTCCAAAGGCACCTCGCACGAGGCAGGCATCGTGTGCCGCATCACCAAGCCTGCCCTCCTGGTGTTGAACCACGAGACTGCCAAGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000569082.1
CDS CCA 90 bp CAGGAGATCTTGGGCATCTTGAGGCAGTGGACGGTGACTTGGGCCTaGCTGGGGAAGCCGCCGACAACCTGTGGAAGACAGGGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: QEILGILRQWTVTWA*LGKPPTTCGRQGSH
Trigger: ATGGGACCCCTGTCTTCCACAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS CCA 90 bp TTTTGGCAGGAGATCTTGGGCATCTTGAGGCAGTGGACGGTGACTTaGGCCTGGCTGGGGAAGCCGCCGACAACCTGTGGAAGACAGGGG +
Preference number: 5 (lower is better)
Translates to: FWQEILGILRQWTVT*AWLGKPPTTCGRQG
Trigger: CCCCTGTCTTCCACAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS-3UTR CAA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGGATGCTGGCAGCCCTaGTCTGGACAAAATCGGCCA +
Preference number: 5 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACGCWQP*SGQNRP
Trigger: TGGCCGATTTTGTCCAGACAAGGGCTGCCAGCATCC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGTCTCCAGCACTGCCTaGAACTCGTCTCCCATCAGG +
Preference number: 5 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACVSSTA*NSSPIR
Trigger: CCTGATGGGAGACGAGTTCAAGGCAGTGCTGGAGAC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR CAA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGCGGTCTGGATCACCTaGGCAGTCTCGTGGTTCACA +
Preference number: 5 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACAVWIT*AVSWFT
Trigger: TGTGAACCACGAGACTGCCAAGGTGATCCAGACCGC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566128.1
CDS GCA 90 bp CCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTaGCTTCTGCTACAAGCCCCATCCCGACCTCCTTGGAGACTTCTA +
Preference number: 5 (lower is better)
Translates to: PRWRRHQGSSCEPGA*LLLQAPSRPPWRLL
Trigger: TAGAAGTCTCCAAGGAGGTCGGGATGGGGCTTGTAGCAGAAGGCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CCA 90 bp ACGACTCCCTTGTTTTGGCAGGAGATCTTGGGCATCTTGAGGCAGTaGACGGTGACTTGGGCCTGGCTGGGGAAGCCGCCGACAACCTCT +
Preference number: 5 (lower is better)
Translates to: TTPLFWQEILGILRQ*TVTWAWLGKPPTTS
Trigger: AGAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CCA 90 bp AAGGAACATGGCCAAGATAAGGAATGCGCAGGCAGCCAGCGGGGCTaGGGAGTGTGGCCTGAGGACCTTCGATTACAGCCTGTGGGACTG +
Preference number: 5 (lower is better)
Translates to: KEHGQDKECAGSQRG*GVWPEDLRLQPVGL
Trigger: CAGTCCCACAGGCTGTAATCGAAGGTCCTCAGGCCACACTCCCCAGCCCCGCTGGCTGCCTGCGCATTCCTTATCTTGGCCATGTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS CCA 90 bp ACGACTCCCTTGTTTTGGCAGGAGATCTTGGGCATCTTGAGGCAGTaGACGGTGACTTGGGCCTGGCTGGGGAAGCCGCCGACAACCTGT +
Preference number: 5 (lower is better)
Translates to: TTPLFWQEILGILRQ*TVTWAWLGKPPTTC
Trigger: ACAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS-3UTR CAA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGAGACATCAATGGACTaGGCTTCCACCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACETSMD*ASTSST
Trigger: GGTGGAGCTGGTGGAAGCCAAGTCCATTGATGTCTC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCGAGATCTTGGGCATCTaGAGGCAGTGGACGGTGACT +
Preference number: 5 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACEILGI*RQWTVT
Trigger: AGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTC...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS TCA 90 bp CTCGAGCCGAGACATGACCTCAGGGATGCCCACAGCGGTGATCATTaGCTGCAGGAAGCTCTGGACGGACTCGGAGCTGCTCTCAGTCAA +
Preference number: 5 (lower is better)
Translates to: LEPRHDLRDAHSGDH*LQEALDGLGAALSQ
Trigger: TTGACTGAGAGCAGCTCCGAGTCCGTCCAGAGCTTCCTGCAGTCAATGATCACCGCTGTGGGCATCCCTGAGGTCATGTCTCGGCTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS CCA 90 bp CTTGACTTGGCCAAGGAGCATCATGGCCTTCTCGCCCGTGATATCTaGGTAGCTGGCTCGCTGGAAGGCGGTCTGGATCACCTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: LDLAKEHHGLLARDI*VAGSLEGGLDHLGS
Trigger: ACTGCCAAGGTGATCCAGACCGCCTTCCAGCGAGCCAGCTACCCAGATATCACGGGCGAGAAGGCCATGATGCTCCTTGGCCAAGTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS CCA 90 bp GCCTTGAACTCGTCTCCCATCAGGCTGAGCATGAGGCGGCCATCCTaGAAAGCTACCTTGGCCAGCGAGTGGAAGACTCGCTCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: ALNSSPIRLSMRRPS*KATLASEWKTRSEN
Trigger: GTTCTCTGAGCGAGTCTTCCACTCGCTGGCCAAGGTAGCTTTCCAGGATGGCCGCCTCATGCTCAGCCTGATGGGAGACGAGTTCAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS CCA 90 bp CAGGAGATCTTGGGCATCTTGAGGCAGTGGACGGTGACTTGGGCCTaGCTGGGGAAGCCGCCGACAACCTCTTGGAAGATTTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: QEILGILRQWTVTWA*LGKPPTTSWKISWL
Trigger: CAACCAGGAAATCTTCCAAGAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCCAACCCATACTTGACTaGGCCAAGGAGCATCATGGC +
Preference number: 5 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACQPILD*AKEHHG
Trigger: GCCATGATGCTCCTTGGCCAAGTCAAGTATGGGTTG...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCAAGAGGCTCACGCCTTaGCTGTTCATGAGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACKRLTP*LFMRAV
Trigger: TACAGCCCTCATGAACAGCAAAGGCGTGAGCCTCTT...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS GCA 90 bp AGCCGAGACATGACCTCAGGGATGCCCACAGCGGTGATCATTGACTaGAGGAAGCTCTGGACGGACTCGGAGCTGCTCTCAGTCAAGTTG +
Preference number: 5 (lower is better)
Translates to: SRDMTSGMPTAVIID*RKLWTDSELLSVKL
Trigger: CAACTTGACTGAGAGCAGCTCCGAGTCCGTCCAGAGCTTCCTGCAGTCAATGATCACCGCTGTGGGCATCCCTGAGGTCATGTCTCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS CCA 90 bp TTTTGGCAGGAGATCTTGGGCATCTTGAGGCAGTGGACGGTGACTTaGGCCTGGCTGGGGAAGCCGCCGACAACCTCTTGGAAGATTTCC +
Preference number: 5 (lower is better)
Translates to: FWQEILGILRQWTVT*AWLGKPPTTSWKIS
Trigger: GGAAATCTTCCAAGAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCTCGTGCGAGGTGCCTTaGGAGCAGGCATGGGCATTG +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLSCEVP*EQAWAL
Trigger: CAATGCCCATGCCTGCTCCAAAGGCACCTCGCACGA...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR CAA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCTCGTGCGAGGTGCCTTaGGAGCAGGCATGGGCATTG +
Preference number: 5 (lower is better)
Translates to: RSWEPISISVLLTQLPPRSCEVP*EQAWAL
Trigger: CAATGCCCATGCCTGCTCCAAAGGCACCTCGCACGA...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR CAA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAAGGCTCTCGCTCCCCTaGGAGATGCAGGAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: CQWAFRIGRSWEPISISVRLSLP*EMQEQL
Trigger: AAGCTGCTCCTGCATCTCCAAGGGGAGCGAGAGCCT...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCAGGCTCTCGCTCCCCTaGGAGATGCAGGAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLRLSLP*EMQEQL
Trigger: AAGCTGCTCCTGCATCTCCAAGGGGAGCGAGAGCCT...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCGCGGTCTGGATCACCTaGGCAGTCTCGTGGTTCAAC +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLAVWIT*AVSWFN
Trigger: GTTGAACCACGAGACTGCCAAGGTGATCCAGACCGC...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR CAA 90 bp CTTCCACCACGCTGGAGGAGACACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCTGGCTGATCTGGATGTaGTGCAACCCATACTTGACT +
Preference number: 5 (lower is better)
Translates to: LPPRWRRHQGSSCEPGACWLIWM*CNPYLT
Trigger: AGTCAAGTATGGGTTGCACAACATCCAGATCAGCCA...GCAAGCACCAGGCTCACAGCTGGAACCCTGGTGTCTCCTCCAGCGTGGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCGGATGCTGGCAGCCCTaGTCTGGACAAAATCGGCCA +
Preference number: 5 (lower is better)
Translates to: RSWEPISISVLLTQLPPRGCWQP*SGQNRP
Trigger: TGGCCGATTTTGTCCAGACAAGGGCTGCCAGCATCC...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCGTCTCCAGCACTGCCTaGAACTCGTCTCCCATCAGG +
Preference number: 5 (lower is better)
Translates to: RSWEPISISVLLTQLPPRVSSTA*NSSPIR
Trigger: CCTGATGGGAGACGAGTTCAAGGCAGTGCTGGAGAC...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCCCATCCCGACCTCCTaGGAGACTTCTAGCTCAAGC +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLPIPTS*ETSSSS
Trigger: GCTTGAGCTAGAAGTCTCCAAGGAGGTCGGGATGGG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACCCATCCCGACCTCCTaGGAGACTTCTAGCTCAAGC +
Preference number: 5 (lower is better)
Translates to: CQWAFRIGRSWEPISISVPIPTS*ETSSSS
Trigger: GCTTGAGCTAGAAGTCTCCAAGGAGGTCGGGATGGG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCGCGGTCTGGATCACCTaGGCAGTCTCGTGGTTCAAC +
Preference number: 5 (lower is better)
Translates to: DREELGANLHLRTPNPTSAVWIT*AVSWFN
Trigger: GTTGAACCACGAGACTGCCAAGGTGATCCAGACCGC...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000379780.6
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCGAGACATCAATGGACTaGGCTTCCACCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLETSMD*ASTSST
Trigger: GGTGGAGCTGGTGGAAGCCAAGTCCATTGATGTCTC...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAAGGCTCTCGCTCCCCTaGGAGATGCAGGAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: IGRSWEPISISVLLTQLPRLSLP*EMQEQL
Trigger: AAGCTGCTCCTGCATCTCCAAGGGGAGCGAGAGCCT...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTATTTGTGAACAGCTGCTaGATCCACCCAGGCTCTCGC +
Preference number: 5 (lower is better)
Translates to: CQWAFRIGRSWEPISISVFVNSC*IHPGSR
Trigger: GCGAGAGCCTGGGTGGATCAAGCAGCTGTTCACAAA...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCATTTCCTGGTTGGTGTaGAAGCCCCAGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLISWLV*KPQVSS
Trigger: GCTGGAGACCTGGGGCTTCAACACCAACCAGGAAAT...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCGCCGCCGACAACCTCTaGGAAGATTTCCTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLAADNL*EDFLVG
Trigger: ACCAACCAGGAAATCTTCCAAGAGGTTGTCGGCGGC...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCGCCGCCGACAACCTCTaGGAAGATTTCCTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: RSWEPISISVLLTQLPPRAADNL*EDFLVG
Trigger: ACCAACCAGGAAATCTTCCAAGAGGTTGTCGGCGGC...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCGAGATCTTGGGCATCTaGAGGCAGTGGACGGTGACT +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLEILGI*RQWTVT
Trigger: AGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTC...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCGAGACATCAATGGACTaGGCTTCCACCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: DREELGANLHLRTPNPTSETSMD*ASTSST
Trigger: GGTGGAGCTGGTGGAAGCCAAGTCCATTGATGTCTC...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACAGGTCAGCTGTGTGTaGATCTGGAGGTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: CQWAFRIGRSWEPISISVQVSCV*IWRSMA
Trigger: TGCCATTGACCTCCAGATCAACACACAGCTGACCTG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCAGGTCAGCTGTGTGTaGATCTGGAGGTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLQVSCV*IWRSMA
Trigger: TGCCATTGACCTCCAGATCAACACACAGCTGACCTG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTATTTGTGAACAGCTGCTaGATCCACCCAGGCTCTCGC +
Preference number: 5 (lower is better)
Translates to: WAFRIGRSWEPISISVLLFVNSC*IHPGSR
Trigger: GCGAGAGCCTGGGTGGATCAAGCAGCTGTTCACAAA...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCTCCTGGAAAGCTACCTaGGCCAGCGAGTGGAAGACT +
Preference number: 5 (lower is better)
Translates to: DREELGANLHLRTPNPTSSWKAT*ASEWKT
Trigger: AGTCTTCCACTCGCTGGCCAAGGTAGCTTTCCAGGA...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR CAA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCATTTCCTGGTTGGTGTaGAAGCCCCAGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: DREELGANLHLRTPNPTSISWLV*KPQVSS
Trigger: GCTGGAGACCTGGGGCTTCAACACCAACCAGGAAAT...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCTGGAAGATTTCCTGGTaGGTGTTGAAGCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: RSWEPISISVLLTQLPPRWKISW*VLKPQV
Trigger: GACCTGGGGCTTCAACACCAACCAGGAAATCTTCCA...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAGCCGCCGACAACCTCTaGGAAGATTTCCTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: WAFRIGRSWEPISISVLLAADNL*EDFLVG
Trigger: ACCAACCAGGAAATCTTCCAAGAGGTTGTCGGCGGC...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAGAGATCTTGGGCATCTaGAGGCAGTGGACGGTGACT +
Preference number: 5 (lower is better)
Translates to: WAFRIGRSWEPISISVLLEILGI*RQWTVT
Trigger: AGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTC...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCTTTTGGCAGGAGATCTaGGGCATCTTGAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLFWQEI*GILRQW
Trigger: CCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAA...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTATTTTGGCAGGAGATCTaGGGCATCTTGAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: CQWAFRIGRSWEPISISVFWQEI*GILRQW
Trigger: CCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAA...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACACGACTCCCTTGTTTaGGCAGGAGATCTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: CQWAFRIGRSWEPISISVHDSLV*AGDLGH
Trigger: ATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGTG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTAAAGAGGCTCACGCCTTaGCTGTTCATGAGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: CQWAFRIGRSWEPISISVKRLTP*LFMRAV
Trigger: TACAGCCCTCATGAACAGCAAAGGCGTGAGCCTCTT...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCAAGAGGCTCACGCCTTaGCTGTTCATGAGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: RSWEPISISVLLTQLPPRKRLTP*LFMRAV
Trigger: TACAGCCCTCATGAACAGCAAAGGCGTGAGCCTCTT...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCCATCCCGACCTCCTaGGAGACTTCTAGCTCAAGC +
Preference number: 5 (lower is better)
Translates to: IGRSWEPISISVLLTQLPPIPTS*ETSSSS
Trigger: GCTTGAGCTAGAAGTCTCCAAGGAGGTCGGGATGGG...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS TCA 90 bp TACCCAGCCACCAGGCAGTGGTGTAGCCATACTTCAGGGTCCCCTTaGAGACCACAGACACGTTCTGAATGGAGACATCAATGGACTTGG +
Preference number: 5 (lower is better)
Translates to: YPATRQWCSHTSGSP*RPQTRSEWRHQWTW
Trigger: CCAAGTCCATTGATGTCTCCATTCAGAACGTGTCTGTGGTCTTCAAGGGGACCCTGAAGTATGGCTACACCACTGCCTGGTGGCTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS-3UTR CAA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCATTTGTGAACAGCTGCTaGATCCACCCAGGCTCTCGC +
Preference number: 5 (lower is better)
Translates to: IGRSWEPISISVLLTQLPFVNSC*IHPGSR
Trigger: GCGAGAGCCTGGGTGGATCAAGCAGCTGTTCACAAA...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCATCCTGGAAAGCTACCTaGGCCAGCGAGTGGAAGACT +
Preference number: 5 (lower is better)
Translates to: IGRSWEPISISVLLTQLPSWKAT*ASEWKT
Trigger: AGTCTTCCACTCGCTGGCCAAGGTAGCTTTCCAGGA...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS-3UTR CAA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAATTTCCTGGTTGGTGTaGAAGCCCCAGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: IGRSWEPISISVLLTQLPISWLV*KPQVSS
Trigger: GCTGGAGACCTGGGGCTTCAACACCAACCAGGAAAT...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTATGGAAGATTTCCTGGTaGGTGTTGAAGCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: WAFRIGRSWEPISISVLLWKISW*VLKPQV
Trigger: GACCTGGGGCTTCAACACCAACCAGGAAATCTTCCA...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACACGACTCCCTTGTTTaGGCAGGAGATCTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: WAFRIGRSWEPISISVLLHDSLV*AGDLGH
Trigger: ATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGTG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCCACGACTCCCTTGTTTaGGCAGGAGATCTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: DREELGANLHLRTPNPTSHDSLV*AGDLGH
Trigger: ATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGTG...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTATTGACCACGACTCCCTaGTTTTGGCAGGAGATCTTG +
Preference number: 5 (lower is better)
Translates to: CQWAFRIGRSWEPISISVLTTTP*FWQEIL
Trigger: CAAGATCTCCTGCCAAAACAAGGGAGTCGTGGTCAA...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCGTAAGCTACAGAATGTaGCTGGTCTGGGCGTGGAAA +
Preference number: 5 (lower is better)
Translates to: RSWEPISISVLLTQLPPRVSYRM*LVWAWK
Trigger: TTTCCACGCCCAGACCAGCAACATTCTGTAGCTTAC...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCTTGTGCAACCCATACTaGACTTGGCCAAGGAGCATC +
Preference number: 5 (lower is better)
Translates to: DREELGANLHLRTPNPTSLCNPY*TWPRSI
Trigger: GATGCTCCTTGGCCAAGTCAAGTATGGGTTGCACAA...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCTGGCTGATCTGGATGTaGTGCAACCCATACTTGACT +
Preference number: 5 (lower is better)
Translates to: RSWEPISISVLLTQLPPRWLIWM*CNPYLT
Trigger: AGTCAAGTATGGGTTGCACAACATCCAGATCAGCCA...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCTGGCTGATCTGGATGTaGTGCAACCCATACTTGACT +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLWLIWM*CNPYLT
Trigger: AGTCAAGTATGGGTTGCACAACATCCAGATCAGCCA...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCATTTTGGCAGGAGATCTaGGGCATCTTGAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: IGRSWEPISISVLLTQLPFWQEI*GILRQW
Trigger: CCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAA...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCTTGACCACGACTCCCTaGTTTTGGCAGGAGATCTTG +
Preference number: 5 (lower is better)
Translates to: DREELGANLHLRTPNPTSLTTTP*FWQEIL
Trigger: CAAGATCTCCTGCCAAAACAAGGGAGTCGTGGTCAA...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTATTGACCACGACTCCCTaGTTTTGGCAGGAGATCTTG +
Preference number: 5 (lower is better)
Translates to: WAFRIGRSWEPISISVLLLTTTP*FWQEIL
Trigger: CAAGATCTCCTGCCAAAACAAGGGAGTCGTGGTCAA...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAGTAAGCTACAGAATGTaGCTGGTCTGGGCGTGGAAA +
Preference number: 5 (lower is better)
Translates to: WAFRIGRSWEPISISVLLVSYRM*LVWAWK
Trigger: TTTCCACGCCCAGACCAGCAACATTCTGTAGCTTAC...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCGTAAGCTACAGAATGTaGCTGGTCTGGGCGTGGAAA +
Preference number: 5 (lower is better)
Translates to: DREELGANLHLRTPNPTSVSYRM*LVWAWK
Trigger: TTTCCACGCCCAGACCAGCAACATTCTGTAGCTTAC...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTATGGTTCACAAAGAACTaGACCTTGAAGGCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: CQWAFRIGRSWEPISISVWFTKN*TLKARS
Trigger: TGACCTCGCCTTCAAGGTCAAGTTCTTTGTGAACCA...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566128.1
CDS TCA 90 bp GCTAGTGAAGCTATTCCTACCCTGAACTCCTCTCTCAGGATGTGCTaGGGATGCCTTCACTTAGCCTTCTGGGCCTCACTTTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: ASEAIPTLNSSLRMC*GCLHLAFWASLSSS
Trigger: AGATGAGGAAAGTGAGGCCCAGAAGGCTAAGTGAAGGCATCCTCAGCACATCCTGAGAGAGGAGTTCAGGGTAGGAATAGCTTCACTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS GCA 90 bp GGACCTTCGATTACAGCCTGTGGGACTGGGCTCAAGGAGATCACATaGCCCAAGAAACCACTGAACCGCTGGATACACAAGAAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: GPSITACGTGLKEIT*PKKPLNRWIHKKRF
Trigger: AAACCTTTTCTTGTGTATCCAGCGGTTCAGTGGTTTCTTGGGGCATGTGATCTCCTTGAGCCCAGTCCCACAGGCTGTAATCGAAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS-3UTR CAA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCATTGTGCAACCCATACTaGACTTGGCCAAGGAGCATC +
Preference number: 5 (lower is better)
Translates to: IGRSWEPISISVLLTQLPLCNPY*TWPRSI
Trigger: GATGCTCCTTGGCCAAGTCAAGTATGGGTTGCACAA...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTGCTCTCAGTCAAGTaGGAAACAGTCTTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLLLSVK*ETVFGV
Trigger: TACACCAAAGACTGTTTCCAACTTGACTGAGAGCAG...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGCCAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTGCTCTCAGTCAAGTaGGAAACAGTCTTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: CQWAFRIGRSWEPISISVLLSVK*ETVFGV
Trigger: TACACCAAAGACTGTTTCCAACTTGACTGAGAGCAG...TACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCGTGATAATCTCAGGGTaGATGATGTCGAAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: DREELGANLHLRTPNPTSVIISG*MMSKRL
Trigger: GAGCCTCTTCGACATCATCAACCCTGAGATTATCAC...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAGTGATAATCTCAGGGTaGATGATGTCGAAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: WAFRIGRSWEPISISVLLVIISG*MMSKRL
Trigger: GAGCCTCTTCGACATCATCAACCCTGAGATTATCAC...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CCA 90 bp AGGAATTTCACCATCACTGAAGAATTGACCACGACTCCCTTGTTTTaGCAGGAGATCTTGGGCATCTTGAGGCAGTGGACGGTGACTTGG +
Preference number: 5 (lower is better)
Translates to: RNFTITEELTTTPLF*QEILGILRQWTVTW
Trigger: CCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGTGGTCAATTCTTCAGTGATGGTGAAATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS-3UTR CAA 90 bp TGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTACTGCTCTCAGTCAAGTaGGAAACAGTCTTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: WAFRIGRSWEPISISVLLLLSVK*ETVFGV
Trigger: TACACCAAAGACTGTTTCCAACTTGACTGAGAGCAG...TAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp ATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCAGTGATAATCTCAGGGTaGATGATGTCGAAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: IGRSWEPISISVLLTQLPVIISG*MMSKRL
Trigger: GAGCCTCTTCGACATCATCAACCCTGAGATTATCAC...TGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS TCA 90 bp AGAATGTTGCTGGTCTGGGCGTGGAAAGAGGAATTTCACCATCACTaGAGAATTGACCACGACTCCCTTGTTTTGGCAGGAGATCTTGGG +
Preference number: 5 (lower is better)
Translates to: RMLLVWAWKEEFHHH*RIDHDSLVLAGDLG
Trigger: CCCAAGATCTCCTGCCAAAACAAGGGAGTCGTGGTCAATTCTTCAGTGATGGTGAAATTCCTCTTTCCACGCCCAGACCAGCAACATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS-3UTR CAA 90 bp AGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCACCACGCATGTTAGAGATGACGTaGATCTCTTTGCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: RSWEPISISVLLTQLPPRMLEMT*ISLQIC
Trigger: ACAGATCTGCAAAGAGATCAACGTCATCTCTAACAT...GCGTGGTGGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp CAGTGGGCCTTTAGGATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCATGTTAGAGATGACGTaGATCTCTTTGCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: QWAFRIGRSWEPISISVLMLEMT*ISLQIC
Trigger: ACAGATCTGCAAAGAGATCAACGTCATCTCTAACAT...GAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS-3UTR CAA 90 bp GATAGGGAGGAGTTGGGAGCCAATCTCCATCTCCGTACTCCTAACCCAACTTCCATGTTAGAGATGACGTaGATCTCTTTGCAGATCTGT +
Preference number: 5 (lower is better)
Translates to: DREELGANLHLRTPNPTSMLEMT*ISLQIC
Trigger: ACAGATCTGCAAAGAGATCAACGTCATCTCTAACAT...GGAAGTTGGGTTAGGAGTACGGAGATGGAGATTGGCTCCCAACTCCTCCCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CCA 72 bp GGAGGCCAGAGGCAGTGCCTCCTTCCAGCTGCGTGGTaGTGGCAGTGCTGGGGACCGGCACAGGGGACTGTC +
Preference number: 6 (lower is better)
Translates to: GGQRQCLLPAAW*WQCWGPAQGTV
Trigger: GACAGTCCCCTGTGCCGGTCCCCAGCACTGCCACCACCACGCAGCTGGAAGGAGGCACTGCCTCTGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569082.1
CDS CCA 72 bp GCCCATCAGGGCAGCAGCAGTCCATGCCCTCGGAGATaGGAAGGACAAAGCTGGCTCCGGGCCCCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: AHQGSSSPCPRR*EGQSWLRAPGL
Trigger: CAGCCCTGGGGCCCGGAGCCAGCTTTGTCCTTCCCATCTCCGAGGGCATGGACTGCTGCTGCCCTGATGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS GCA 72 bp CAGGAGGGCAGGCTTGGTGATGCGGCACACGATGCCTaGCTCGTGCGAGGTGCCTTTGGAGCAGGCATGGGC +
Preference number: 6 (lower is better)
Translates to: QEGRLGDAAHDA*LVRGAFGAGMG
Trigger: GCCCATGCCTGCTCCAAAGGCACCTCGCACGAGGCAGGCATCGTGTGCCGCATCACCAAGCCTGCCCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000569082.1
CDS CCA 72 bp CAGTGCCTCCTTCCAGCTGCGTGGTGGTGGCAGTGCTaGGGACCGGCACAGGGGACTGTCCCTTCAGGACCA +
Preference number: 6 (lower is better)
Translates to: QCLLPAAWWWQC*GPAQGTVPSGP
Trigger: TGGTCCTGAAGGGACAGTCCCCTGTGCCGGTCCCCAGCACTGCCACCACCACGCAGCTGGAAGGAGGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569082.1
CDS CCA 72 bp AAAGGAGGCCAGAGGCAGTGCCTCCTTCCAGCTGCGTaGTGGTGGCAGTGCTGGGGACCGGCACAGGGGACT +
Preference number: 6 (lower is better)
Translates to: KGGQRQCLLPAA*WWQCWGPAQGT
Trigger: AGTCCCCTGTGCCGGTCCCCAGCACTGCCACCACCACGCAGCTGGAAGGAGGCACTGCCTCTGGCCTCCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569082.1
CDS GCA 72 bp GCAGGCTTGGTGATGCGGCACACGATGCCTGCCTCGTaGGAGGTGCCTTTGGAGCAGGCATGGGCATTGCCC +
Preference number: 6 (lower is better)
Translates to: AGLVMRHTMPAS*EVPLEQAWALP
Trigger: GGGCAATGCCCATGCCTGCTCCAAAGGCACCTCGCACGAGGCAGGCATCGTGTGCCGCATCACCAAGCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000569082.1
CDS TCA 72 bp CAGTCTCGTGGTTCAACACCAGGAGGGCAGGCTTGGTaGTGCGGCACACGATGCCTGCCTCGTGCGAGGTGC +
Preference number: 6 (lower is better)
Translates to: QSRGSTPGGQAW*CGTRCLPRARC
Trigger: GCACCTCGCACGAGGCAGGCATCGTGTGCCGCATCACCAAGCCTGCCCTCCTGGTGTTGAACCACGAGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000569082.1
CDS CCA 72 bp GGTAGCTGGCTCGCTGGAAGGCGGTCTGGATCACCTTaGCAGTCTCGTGGTTCAACACCAGGAGGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: GSWLAGRRSGSP*QSRGSTPGGQA
Trigger: AGCCTGCCCTCCTGGTGTTGAACCACGAGACTGCCAAGGTGATCCAGACCGCCTTCCAGCGAGCCAGCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000569082.1
CDS CCA 72 bp GAGATCTTGGGCATCTTGAGGCAGTGGACGGTGACTTaGGCCTGGCTGGGGAAGCCGCCGACAACCTCTTGG +
Preference number: 6 (lower is better)
Translates to: EILGILRQWTVT*AWLGKPPTTSW
Trigger: CCAAGAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CCA 72 bp GGCCAAGATAAGGAATGCGCAGGCAGCCAGCGGGGCTaGGGAGTGTGGCCTGAGGACCTTCGATTACAGCCT +
Preference number: 6 (lower is better)
Translates to: GQDKECAGSQRG*GVWPEDLRLQP
Trigger: AGGCTGTAATCGAAGGTCCTCAGGCCACACTCCCCAGCCCCGCTGGCTGCCTGCGCATTCCTTATCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS CCA 72 bp TTGGGCATCTTGAGGCAGTGGACGGTGACTTGGGCCTaGCTGGGGAAGCCGCCGACAACCTGTGGAAGACAG +
Preference number: 6 (lower is better)
Translates to: LGILRQWTVTWA*LGKPPTTCGRQ
Trigger: CTGTCTTCCACAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS CCA 72 bp GAGATCTTGGGCATCTTGAGGCAGTGGACGGTGACTTaGGCCTGGCTGGGGAAGCCGCCGACAACCTGTGGA +
Preference number: 6 (lower is better)
Translates to: EILGILRQWTVT*AWLGKPPTTCG
Trigger: TCCACAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS CAA 72 bp TTGGCAGTCTCGTGGTTCAACACCAGGAGGGCAGGCTaGGTGATGCGGCACACGATGCCTGCCTCGTGCGAG +
Preference number: 6 (lower is better)
Translates to: LAVSWFNTRRAG*VMRHTMPASCE
Trigger: CTCGCACGAGGCAGGCATCGTGTGCCGCATCACCAAGCCTGCCCTCCTGGTGTTGAACCACGAGACTGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000569082.1
CDS CAA 72 bp GGAGATCTTGGGCATCTTGAGGCAGTGGACGGTGACTaGGGCCTGGCTGGGGAAGCCGCCGACAACCTCTTG +
Preference number: 6 (lower is better)
Translates to: GDLGHLEAVDGD*GLAGEAADNLL
Trigger: CAAGAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CCA 72 bp GCCAAGGAGCATCATGGCCTTCTCGCCCGTGATATCTaGGTAGCTGGCTCGCTGGAAGGCGGTCTGGATCAC +
Preference number: 6 (lower is better)
Translates to: AKEHHGLLARDI*VAGSLEGGLDH
Trigger: GTGATCCAGACCGCCTTCCAGCGAGCCAGCTACCCAGATATCACGGGCGAGAAGGCCATGATGCTCCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS CCA 72 bp TCGTCTCCCATCAGGCTGAGCATGAGGCGGCCATCCTaGAAAGCTACCTTGGCCAGCGAGTGGAAGACTCGC +
Preference number: 6 (lower is better)
Translates to: SSPIRLSMRRPS*KATLASEWKTR
Trigger: GCGAGTCTTCCACTCGCTGGCCAAGGTAGCTTTCCAGGATGGCCGCCTCATGCTCAGCCTGATGGGAGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS CCA 72 bp TTGTTTTGGCAGGAGATCTTGGGCATCTTGAGGCAGTaGACGGTGACTTGGGCCTGGCTGGGGAAGCCGCCG +
Preference number: 6 (lower is better)
Translates to: LFWQEILGILRQ*TVTWAWLGKPP
Trigger: CGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS CCA 72 bp GTCAGGACTGTGGCAGCCAGCATGGTTATCAGGCAGTaGTGTGTAAGTGGCCCGAGCCGTTCAGCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: VRTVAASMVIRQ*CVSGPSRSAWS
Trigger: GCTCCAGGCTGAACGGCTCGGGCCACTTACACACCACTGCCTGATAACCATGCTGGCTGCCACAGTCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379780.6
CDS CAA 90 bp GAATTGACCACGACTCCCTTGTTTTGGCAGGAGATCTTGGGCATCTaGAGGCAGTGGACGGTGACTTGGGCCTGGCTGGGGAAGCCGCCG +
Preference number: 6 (lower is better)
Translates to: ELTTTPLFWQEILGI*RQWTVTWAWLGKPP
Trigger: CGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGTGGTCAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS GCA 72 bp ACCAGGGTTCCAGCTGTGAGCCTGGTGCTTGCCTTCTaGTACAAGCCCCATCCCGACCTCCTTGGAGACTTC +
Preference number: 6 (lower is better)
Translates to: TRVPAVSLVLAF*YKPHPDLLGDF
Trigger: GAAGTCTCCAAGGAGGTCGGGATGGGGCTTGTAGCAGAAGGCAAGCACCAGGCTCACAGCTGGAACCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CCA 72 bp TTGGGCATCTTGAGGCAGTGGACGGTGACTTGGGCCTaGCTGGGGAAGCCGCCGACAACCTCTTGGAAGATT +
Preference number: 6 (lower is better)
Translates to: LGILRQWTVTWA*LGKPPTTSWKI
Trigger: AATCTTCCAAGAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CAA 72 bp AGGCTGAGCATGAGGCGGCCATCCTGGAAAGCTACCTaGGCCAGCGAGTGGAAGACTCGCTCAGAGAACCAG +
Preference number: 6 (lower is better)
Translates to: RLSMRRPSWKAT*ASEWKTRSENQ
Trigger: CTGGTTCTCTGAGCGAGTCTTCCACTCGCTGGCCAAGGTAGCTTTCCAGGATGGCCGCCTCATGCTCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS CAA 72 bp ACGACTCCCTTGTTTTGGCAGGAGATCTTGGGCATCTaGAGGCAGTGGACGGTGACTTGGGCCTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: TTPLFWQEILGI*RQWTVTWAWLG
Trigger: CCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS CAA 90 bp TCTCCCATCAGGCTGAGCATGAGGCGGCCATCCTGGAAAGCTACCTaGGCCAGCGAGTGGAAGACTCGCTCAGAGAACCAGAAGTACAGC +
Preference number: 6 (lower is better)
Translates to: SPIRLSMRRPSWKAT*ASEWKTRSENQKYS
Trigger: GCTGTACTTCTGGTTCTCTGAGCGAGTCTTCCACTCGCTGGCCAAGGTAGCTTTCCAGGATGGCCGCCTCATGCTCAGCCTGATGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200676.8
ENST00000566128.1
CDS CAA 90 bp GTTTTGGCAGGAGATCTTGGGCATCTTGAGGCAGTGGACGGTGACTaGGGCCTGGCTGGGGAAGCCGCCGACAACCTCTTGGAAGATTTC +
Preference number: 6 (lower is better)
Translates to: VLAGDLGHLEAVDGD*GLAGEAADNLLEDF
Trigger: GAAATCTTCCAAGAGGTTGTCGGCGGCTTCCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS TCA 72 bp AGACATGACCTCAGGGATGCCCACAGCGGTGATCATTaGCTGCAGGAAGCTCTGGACGGACTCGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: RHDLRDAHSGDH*LQEALDGLGAA
Trigger: AGCAGCTCCGAGTCCGTCCAGAGCTTCCTGCAGTCAATGATCACCGCTGTGGGCATCCCTGAGGTCATGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS GCA 72 bp ATGACCTCAGGGATGCCCACAGCGGTGATCATTGACTaGAGGAAGCTCTGGACGGACTCGGAGCTGCTCTCA +
Preference number: 6 (lower is better)
Translates to: MTSGMPTAVIID*RKLWTDSELLS
Trigger: TGAGAGCAGCTCCGAGTCCGTCCAGAGCTTCCTGCAGTCAATGATCACCGCTGTGGGCATCCCTGAGGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS CCA 72 bp GAGACATCAATGGACTTGGCTTCCACCAGCTCCACCTaGCTGCTGGCGATGGACAAGTGGCTGATCTGGATG +
Preference number: 6 (lower is better)
Translates to: ETSMDLASTSST*LLAMDKWLIWM
Trigger: CATCCAGATCAGCCACTTGTCCATCGCCAGCAGCCAGGTGGAGCTGGTGGAAGCCAAGTCCATTGATGTCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS CAA 90 bp ATCACTGAAGAATTGACCACGACTCCCTTGTTTTGGCAGGAGATCTaGGGCATCTTGAGGCAGTGGACGGTGACTTGGGCCTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: ITEELTTTPLFWQEI*GILRQWTVTWAWLG
Trigger: CCCCAGCCAGGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGTGGTCAATTCTTCAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS CCA 72 bp TGTGGCCTGAGGACCTTCGATTACAGCCTGTGGGACTaGGCTCAAGGAGATCACATGCCCCAAGAAACCACT +
Preference number: 6 (lower is better)
Translates to: CGLRTFDYSLWD*AQGDHMPQETT
Trigger: AGTGGTTTCTTGGGGCATGTGATCTCCTTGAGCCCAGTCCCACAGGCTGTAATCGAAGGTCCTCAGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS CAA 72 bp GAATTGACCACGACTCCCTTGTTTTGGCAGGAGATCTaGGGCATCTTGAGGCAGTGGACGGTGACTTGGGCC +
Preference number: 6 (lower is better)
Translates to: ELTTTPLFWQEI*GILRQWTVTWA
Trigger: GGCCCAAGTCACCGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGTGGTCAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS GCA 72 bp TCCACCAGCAGGTGCTCAGGGAAGCCAAAGTCCATCTaGAGCAGCAGGAAGCCATCTCGAGTGATAATCTCA +
Preference number: 6 (lower is better)
Translates to: STSRCSGKPKSI*SSRKPSRVIIS
Trigger: TGAGATTATCACTCGAGATGGCTTCCTGCTGCTGCAGATGGACTTTGGCTTCCCTGAGCACCTGCTGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CAA 72 bp GTGGCTGATCTGGATGTTGTGCAACCCATACTTGACTaGGCCAAGGAGCATCATGGCCTTCTCGCCCGTGAT +
Preference number: 6 (lower is better)
Translates to: VADLDVVQPILD*AKEHHGLLARD
Trigger: ATCACGGGCGAGAAGGCCATGATGCTCCTTGGCCAAGTCAAGTATGGGTTGCACAACATCCAGATCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS CAA 72 bp GACAAGTGGCTGATCTGGATGTTGTGCAACCCATACTaGACTTGGCCAAGGAGCATCATGGCCTTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: DKWLIWMLCNPY*TWPRSIMAFSP
Trigger: GGGCGAGAAGGCCATGATGCTCCTTGGCCAAGTCAAGTATGGGTTGCACAACATCCAGATCAGCCACTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS CAA 72 bp TGCTTGCCTTCTGCTACAAGCCCCATCCCGACCTCCTaGGAGACTTCTAGCTCAAGCTCTGGAGGAAATCCA +
Preference number: 6 (lower is better)
Translates to: CLPSATSPIPTS*ETSSSSSGGNP
Trigger: TGGATTTCCTCCAGAGCTTGAGCTAGAAGTCTCCAAGGAGGTCGGGATGGGGCTTGTAGCAGAAGGCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS TCA 72 bp TCCGCACTCTACCAGAGTCACAGGTCAGCTGTGTGTTaGTCTGGAGGTCAATGGCAGAGTCGATCTCGAAGT +
Preference number: 6 (lower is better)
Translates to: SALYQSHRSAVC*SGGQWQSRSRS
Trigger: ACTTCGAGATCGACTCTGCCATTGACCTCCAGATCAACACACAGCTGACCTGTGACTCTGGTAGAGTGCGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS GCA 72 bp ATTACAGCCTGTGGGACTGGGCTCAAGGAGATCACATaGCCCAAGAAACCACTGAACCGCTGGATACACAAG +
Preference number: 6 (lower is better)
Translates to: ITACGTGLKEIT*PKKPLNRWIHK
Trigger: CTTGTGTATCCAGCGGTTCAGTGGTTTCTTGGGGCATGTGATCTCCTTGAGCCCAGTCCCACAGGCTGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650358.1
CDS CCA 72 bp TGGCTGATCTGGATGTTGTGCAACCCATACTTGACTTaGCCAAGGAGCATCATGGCCTTCTCGCCCGTGATA +
Preference number: 6 (lower is better)
Translates to: WLIWMLCNPYLT*PRSIMAFSPVI
Trigger: TATCACGGGCGAGAAGGCCATGATGCTCCTTGGCCAAGTCAAGTATGGGTTGCACAACATCCAGATCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS CCA 72 bp TCTGGAGGTCAATGGCAGAGTCGATCTCGAAGTCAATaGACTGATCAATACCCAGCCACCAGGCAGTGGTGT +
Preference number: 6 (lower is better)
Translates to: SGGQWQSRSRSQ*TDQYPATRQWC
Trigger: ACACCACTGCCTGGTGGCTGGGTATTGATCAGTCCATTGACTTCGAGATCGACTCTGCCATTGACCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS CAA 72 bp TTCAGGGTGAAGGAGATGAAATTTGTGAACAGCTGCTaGATCCACCCAGGCTCTCGCTCCCCTTGGAGATGC +
Preference number: 6 (lower is better)
Translates to: FRVKEMKFVNSC*IHPGSRSPWRC
Trigger: GCATCTCCAAGGGGAGCGAGAGCCTGGGTGGATCAAGCAGCTGTTCACAAATTTCATCTCCTTCACCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS CAA 90 bp CGAGTGATAATCTCAGGGTTGATGATGTCGAAGAGGCTCACGCCTTaGCTGTTCATGAGGGCTGTAAACACTACCTCGAGCCGAGACATG +
Preference number: 6 (lower is better)
Translates to: RVIISGLMMSKRLTP*LFMRAVNTTSSRDM
Trigger: CATGTCTCGGCTCGAGGTAGTGTTTACAGCCCTCATGAACAGCAAAGGCGTGAGCCTCTTCGACATCATCAACCCTGAGATTATCACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CAA 90 bp GCAGCCCTTGTCTGGACAAAATCGGCCATGATGTTAGAGATGACGTaGATCTCTTTGCAGATCTGGGGCAGACAGAGCAGGTGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: AALVWTKSAMMLEMT*ISLQIWGRQSRCFP
Trigger: TGGAAAGCACCTGCTCTGTCTGCCCCAGATCTGCAAAGAGATCAACGTCATCTCTAACATCATGGCCGATTTTGTCCAGACAAGGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569082.1
CDS TCA 72 bp TACTTCAGGGTCCCCTTGAAGACCACAGACACGTTCTaGATGGAGACATCAATGGACTTGGCTTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: YFRVPLKTTDTF*METSMDLASTS
Trigger: GCTGGTGGAAGCCAAGTCCATTGATGTCTCCATTCAGAACGTGTCTGTGGTCTTCAAGGGGACCCTGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS CCA 72 bp ACCATCACTGAAGAATTGACCACGACTCCCTTGTTTTaGCAGGAGATCTTGGGCATCTTGAGGCAGTGGACG +
Preference number: 6 (lower is better)
Translates to: TITEELTTTPLF*QEILGILRQWT
Trigger: CGTCCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGTGGTCAATTCTTCAGTGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS CAA 72 bp ATCTCAGGGTTGATGATGTCGAAGAGGCTCACGCCTTaGCTGTTCATGAGGGCTGTAAACACTACCTCGAGC +
Preference number: 6 (lower is better)
Translates to: ISGLMMSKRLTP*LFMRAVNTTSS
Trigger: GCTCGAGGTAGTGTTTACAGCCCTCATGAACAGCAAAGGCGTGAGCCTCTTCGACATCATCAACCCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS CAA 72 bp AGCAGCAGGAAGCCATCTCGAGTGATAATCTCAGGGTaGATGATGTCGAAGAGGCTCACGCCTTTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: SSRKPSRVIISG*MMSKRLTPLLF
Trigger: GAACAGCAAAGGCGTGAGCCTCTTCGACATCATCAACCCTGAGATTATCACTCGAGATGGCTTCCTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
CDS TCA 72 bp CTGGTCTGGGCGTGGAAAGAGGAATTTCACCATCACTaGAGAATTGACCACGACTCCCTTGTTTTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: LVWAWKEEFHHH*RIDHDSLVLAG
Trigger: TCCTGCCAAAACAAGGGAGTCGTGGTCAATTCTTCAGTGATGGTGAAATTCCTCTTTCCACGCCCAGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000650358.1
CDS CCA 72 bp ACTCTACCAGAGTCACAGGTCAGCTGTGTGTTGATCTaGAGGTCAATGGCAGAGTCGATCTCGAAGTCAATG +
Preference number: 6 (lower is better)
Translates to: TLPESQVSCVLI*RSMAESISKSM
Trigger: CATTGACTTCGAGATCGACTCTGCCATTGACCTCCAGATCAACACACAGCTGACCTGTGACTCTGGTAGAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000200676.8
ENST00000379780.6
ENST00000566128.1
ENST00000569082.1
CDS CAA 72 bp AAATCGGCCATGATGTTAGAGATGACGTTGATCTCTTaGCAGATCTGGGGCAGACAGAGCAGGTGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: KSAMMLEMTLIS*QIWGRQSRCFP
Trigger: TGGAAAGCACCTGCTCTGTCTGCCCCAGATCTGCAAAGAGATCAACGTCATCTCTAACATCATGGCCGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569082.1
CDS TCA 72 bp GGGGATAATCATAGATCCTACCTCATAGGGTTGTCCTaGGGATGGAATGAGATAATCTGTGGAAAGAGCTTA +
Preference number: 6 (lower is better)
Translates to: GDNHRSYLIGLS*GWNEIICGKSL
Trigger: TAAGCTCTTTCCACAGATTATCTCATTCCATCCTCAGGACAACCCTATGAGGTAGGATCTATGATTATCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650358.1