Pregenerated sensors for CETN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000147400Ensembl transcript IDs: ENST00000370277.5, ENST00000493482.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTTGTCTAAAGTCGTTCTGTGTTTGTGGATATGTGGAAATGCATaGCGAGGGAAACGATGCAAGGCAAAATGGCAGGTGCTCAAAGCT | + |
|
Preference number: 1 (lower is better) Translates to: CLSKVVLCLWICGNA*RGKRCKAKWQVLKA Trigger: AGCTTTGAGCACCTGCCATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGAACGACTTTAGACAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR GCA 90 bp | ACTAAACTCAAGTGTCAAATAAAAACTGGAGCCGTCAAGAATGACTaGTTGTGGCAACACAGGTGTAACATGTGCTTGTCTAAAGTCGTT | + |
|
Preference number: 1 (lower is better) Translates to: TKLKCQIKTGAVKND*LWQHRCNMCLSKVV Trigger: AACGACTTTAGACAAGCACATGTTACACCTGTGTTGCCACAAGCAGTCATTCTTGACGGCTCCAGTTTTTATTTGACACTTGAGTTTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR-3UTR TCA 90 bp | CATCCTAGTGTTGCGTTAGCCTGGCTCTCCCCATTTTATTCAAGCACAAATTACTGGAGCCGTCAAGAATaGCTGCTTGTGGCAACACAG | + |
|
Preference number: 2 (lower is better) Translates to: HPSVALAWLSPFYSSTNYWSRQE*LLVATQ Trigger: CTGTGTTGCCACAAGCAGTCATTCTTGACGGCTCCA...GTAATTTGTGCTTGAATAAAATGGGGAGAGCCAGGCTAACGCAACACTAGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR-3UTR CCA 90 bp | AAATGCATGACGAGGGAAACGATGCAAGGCAAAATGGCAGGTGCTCAAAGCTTTCCAGATTTCACACCATaGCAGGCACTAAATCTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KCMTRETMQGKMAGAQSFPDFTP*QALNLV Trigger: AACTAGATTTAGTGCCTGCCATGGTGTGAAATCTGG...AAAGCTTTGAGCACCTGCCATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAATAAAGGGAGGTCCGTaGGGGAAAAGTTTGTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SVFVDMWKCMTRETMQGKIKGGP*GKSLCS Trigger: AGAACACAAACTTTTCCCCCACGGACCTCCCTTTAT...TTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR-3UTR CCA 90 bp | CATCCTAGTGTTGCGTTAGCCTGGCTCTCCCCATTTTATTCAAGCACAAATTACAAGAATGACTGCTTGTaGCAACACAGGTGTAACATG | + |
|
Preference number: 2 (lower is better) Translates to: HPSVALAWLSPFYSSTNYKNDCL*QHRCNM Trigger: CATGTTACACCTGTGTTGCCACAAGCAGTCATTCTT...GTAATTTGTGCTTGAATAAAATGGGGAGAGCCAGGCTAACGCAACACTAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR CAA 90 bp | AAACTCAAGTGTCAAATAAAAACTGGAGCCGTCAAGAATGACTGCTaGTGGCAACACAGGTGTAACATGTGCTTGTCTAAAGTCGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KLKCQIKTGAVKNDC*WQHRCNMCLSKVVL Trigger: CAGAACGACTTTAGACAAGCACATGTTACACCTGTGTTGCCACAAGCAGTCATTCTTGACGGCTCCAGTTTTTATTTGACACTTGAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR-3UTR GCA 90 bp | AAATGCATGACGAGGGAAACGATGCAAGGCAAAATGGCAGGTGCTCAAAGCTTTCTAGTTACATGTGCTTaGAGTAGAAAAAGAAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: KCMTRETMQGKMAGAQSFLVTCA*SRKRRH Trigger: GTGTCTTCTTTTTCTACTGCAAGCACATGTAACTAG...AAAGCTTTGAGCACCTGCCATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR TCA 72 bp | AAAGTCGTTCTGTGTTTGTGGATATGTGGAAATGCATaGCGAGGGAAACGATGCAAGGCAAAATGGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KVVLCLWICGNA*RGKRCKAKWQV Trigger: CACCTGCCATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGAACGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR GCA 72 bp | AAGTGTCAAATAAAAACTGGAGCCGTCAAGAATGACTaGTTGTGGCAACACAGGTGTAACATGTGCTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KCQIKTGAVKND*LWQHRCNMCLS Trigger: AGACAAGCACATGTTACACCTGTGTTGCCACAAGCAGTCATTCTTGACGGCTCCAGTTTTTATTTGACACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR CCA 72 bp | CAAATAAAAACTGGAGCCGTCAAGAATGACTGCTTGTaGCAACACAGGTGTAACATGTGCTTGTCTAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QIKTGAVKNDCL*QHRCNMCLSKV Trigger: GACTTTAGACAAGCACATGTTACACCTGTGTTGCCACAAGCAGTCATTCTTGACGGCTCCAGTTTTTATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR-3UTR CAA 90 bp | ACATGTGCTTGTCTAAAGTCGTTCTGTGTTTGTGGATATGTGGAAATGCATGACTCCTTTTCTTCACGCTaGTGTGCTCTTGTTTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TCACLKSFCVCGYVEMHDSFSSR*CALVLL Trigger: AAGCAAAACAAGAGCACACAAGCGTGAAGAAAAGGA...GTCATGCATTTCCACATATCCACAAACACAGAACGACTTTAGACAAGCACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR CCA 72 bp | AAAAGTTTGTGTTCTCAAAAGCCAGATTTCACACCATaGCAGGCACTAAATCTAGTTACATGTGCTTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KSLCSQKPDFTP*QALNLVTCACS Trigger: ACTGCAAGCACATGTAACTAGATTTAGTGCCTGCCATGGTGTGAAATCTGGCTTTTGAGAACACAAACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR GCA 90 bp | CGTTCTGTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCATGCGCAGGAACTCTTaGTCACTGACCTCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RSVFVDMWKCMTRETMQGMRRNS*SLTSPS Trigger: AGATGGAGAGGTCAGTGAGCAAGAGTTCCTGCGCAT...GCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR TCA 90 bp | AAATGCATGACGAGGGAAACGATGCAAGGCAAAATGGCAGGTGCTCAAAGCTTTGGCTGGTCTTTTTCATaGTGCGCAGGAACTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KCMTRETMQGKMAGAQSFGWSFS*CAGTLA Trigger: AGCAAGAGTTCCTGCGCATCATGAAAAAGACCAGCC...AAAGCTTTGAGCACCTGCCATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR TCA 90 bp | GTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAATGTGGAGCCGTCAAGAATaGCTGCTTGTGGCAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VFVDMWKCMTRETMQGKMWSRQE*LLVATQ Trigger: CTGTGTTGCCACAAGCAGTCATTCTTGACGGCTCCA...CATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR GCA 90 bp | ACATGTGCTTGTCTAAAGTCGTTCTGTGTTTGTGGATATGTGGAAATGCATGACGCCAAAGGAGTCCGCTaGCGGTTGTTAGGCAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: TCACLKSFCVCGYVEMHDAKGVR*RLLGNR Trigger: TCGGTTGCCTAACAACCGGCAGCGGACTCCTTTGGC...GTCATGCATTTCCACATATCCACAAACACAGAACGACTTTAGACAAGCACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR GCA 90 bp | TCTGTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAGCCCAGGGCCCTCATTaGCACCTTCAGTTCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVFVDMWKCMTRETMQGKAQGPH*HLQFFN Trigger: GTTAAAGAACTGAAGGTGGCAATGAGGGCCCTGGGC...TTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR TCA 90 bp | CGTTCTGTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCATATGTGGAAATGCATaGCGAGGGAAACGATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSVFVDMWKCMTRETMQGICGNA*RGKRCK Trigger: CTTGCATCGTTTCCCTCGTCATGCATTTCCACATAT...GCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR GCA 90 bp | GTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAATGCGGATCTCCTGCTTTTaGTCTTCAGTAAGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFVDMWKCMTRETMQGKMRISCF*SSVSSG Trigger: GCCTGAGCTTACTGAAGAGCAAAAGCAGGAGATCCG...CATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR GCA 90 bp | CGTTCTGTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCGTGGATATGTGGAAATaGATGACGAGGGAAACGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSVFVDMWKCMTRETMQGVDMWK*MTRETM Trigger: CATCGTTTCCCTCGTCATGCATTTCCACATATCCAC...GCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR GCA 90 bp | GTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAATGGCCGTCAAGAATGACTaGTTGTGGCAACACAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFVDMWKCMTRETMQGKMAVKND*LWQHRC Trigger: ACACCTGTGTTGCCACAAGCAGTCATTCTTGACGGC...CATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CCA 90 bp | CGTTCTGTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCCGATGCAAGGCAAAATaGCAGGTGCTCAAAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RSVFVDMWKCMTRETMQGRCKAK*QVLKAL Trigger: TAAAGCTTTGAGCACCTGCCATTTTGCCTTGCATCG...GCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAATGTCTCACCCAACTCCTTaGCCACGCGTTTCAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFVDMWKCMTRETMQGKMSHPTP*PRVSDF Trigger: AAAATCTGAAACGCGTGGCCAAGGAGTTGGGTGAGA...CATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CCA 90 bp | ACGAGGGAAACGATGCAAGGCAAAATGGCAGGTGCTCAAAGCTTTAAGATCCTTATAAAGGGAGGTCCGTaGGGGAAAAGTTTGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRETMQGKMAGAQSFKILIKGGP*GKSLCS Trigger: AGAACACAAACTTTTCCCCCACGGACCTCCCTTTAT...AAGGATCTTAAAGCTTTGAGCACCTGCCATTTTGCCTTGCATCGTTTCCCTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR GCA 90 bp | ACATGTGCTTGTCTAAAGTCGTTCTGTGTTTGTGGATATGTGGAAATGCATGACGCTTCCCGGATCTCCTaGTTTTGCTCTTCAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCACLKSFCVCGYVEMHDASRIS*FCSSVS Trigger: GCTTACTGAAGAGCAAAAGCAGGAGATCCGGGAAGC...GTCATGCATTTCCACATATCCACAAACACAGAACGACTTTAGACAAGCACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAATGAGTGTTGCGTTAGCCTaGCTCTCCCCATTTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFVDMWKCMTRETMQGKMSVALA*LSPFYS Trigger: TGAATAAAATGGGGAGAGCCAGGCTAACGCAACACT...CATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR GCA 90 bp | CGTTCTGTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCCTAGTTACATGTGCTTaGAGTAGAAAAAGAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RSVFVDMWKCMTRETMQGLVTCA*SRKRRH Trigger: GTGTCTTCTTTTTCTACTGCAAGCACATGTAACTAG...GCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR GCA 90 bp | AAATGCATGACGAGGGAAACGATGCAAGGCAAAATGGCAGGTGCTCAAAGCTTTTTCTTCACGCTTGTGTaGTCTTGTTTTGCTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCMTRETMQGKMAGAQSFFFTLV*SCFAFE Trigger: CTCAAAAGCAAAACAAGAGCACACAAGCGTGAAGAA...AAAGCTTTGAGCACCTGCCATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAATGAAGAATGACTGCTTGTaGCAACACAGGTGTAACATG | + |
|
Preference number: 4 (lower is better) Translates to: VFVDMWKCMTRETMQGKMKNDCL*QHRCNM Trigger: CATGTTACACCTGTGTTGCCACAAGCAGTCATTCTT...CATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR CAA 72 bp | AATGACTGCTTGTGGCAACACAGGTGTAACATGTGCTaGTCTAAAGTCGTTCTGTGTTTGTGGATATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NDCLWQHRCNMC*SKVVLCLWICG Trigger: TCCACATATCCACAAACACAGAACGACTTTAGACAAGCACATGTTACACCTGTGTTGCCACAAGCAGTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR TCA 90 bp | TCTGTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAACTCATTCTTTTTCGCTaGGAACTTGATGCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVFVDMWKCMTRETMQGKLILFR*ELDAMF Trigger: AAACATGGCATCAAGTTCTCAGCGAAAAAGAATGAG...TTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR TCA 90 bp | GTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAATGCGCGTTTCAGATTTTTaGACGAAATCTTCCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFVDMWKCMTRETMQGKMRVSDF*TKSSQF Trigger: AAACTGGGAAGATTTCGTTCAAAAATCTGAAACGCG...CATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR GCA 90 bp | ACATGTGCTTGTCTAAAGTCGTTCTGTGTTTGTGGATATGTGGAAATGCATGACACATCCAAATGCCAGTaGAGGAGTTCACTGGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TCACLKSFCVCGYVEMHDTSKCQ*RSSLGL Trigger: TAAACCCAGTGAACTCCTGCACTGGCATTTGGATGT...GTCATGCATTTCCACATATCCACAAACACAGAACGACTTTAGACAAGCACATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR GCA 90 bp | CATCCTAGTGTTGCGTTAGCCTGGCTCTCCCCATTTTATTCAAGCACAAATTACGCAAAAAGCAATTCATaGCAGGAAAGTAGCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPSVALAWLSPFYSSTNYAKSNS*QESSKG Trigger: TCCTTTGCTACTTTCCTGGCATGAATTGCTTTTTGC...GTAATTTGTGCTTGAATAAAATGGGGAGAGCCAGGCTAACGCAACACTAGGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| 3UTR CAA 72 bp | TGTCAAATAAAAACTGGAGCCGTCAAGAATGACTGCTaGTGGCAACACAGGTGTAACATGTGCTTGTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CQIKTGAVKNDC*WQHRCNMCLSK Trigger: TTTAGACAAGCACATGTTACACCTGTGTTGCCACAAGCAGTCATTCTTGACGGCTCCAGTTTTTATTTGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR TCA 90 bp | CATCCTAGTGTTGCGTTAGCCTGGCTCTCCCCATTTTATTCAAGCACAAATTACCTTCAACACAATAATTaGGAAGAGGAACTCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPSVALAWLSPFYSSTNYLQHNN*EEELIS Trigger: GCTTATGAGTTCCTCTTCTCAATTATTGTGTTGAAG...GTAATTTGTGCTTGAATAAAATGGGGAGAGCCAGGCTAACGCAACACTAGGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS CCA 90 bp | TGGGAGGGCAGGCCTCCTGATGCAGTTGCTACCTGGACTGCTCTGTaGTCACATGACTGTTTTAACAGGAAGACGCCATGGACCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WEGRPPDAVATWTAL*SHDCFNRKTPWTSA Trigger: TGCAGAGGTCCATGGCGTCTTCCTGTTAAAACAGTCATGTGACCACAGAGCAGTCCAGGTAGCAACTGCATCAGGAGGCCTGCCCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS CCA 90 bp | TGTAACTCGAGTCTAGACTTGCGGCAAGTGTCAGGAAGCCCATTTTaGCCTCAAAGAAACACCAGGCAAGCCAGGCACTCCATCCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CNSSLDLRQVSGSPF*PQRNTRQARHSIQG Trigger: ACCTTGGATGGAGTGCCTGGCTTGCCTGGTGTTTCTTTGAGGCCAAAATGGGCTTCCTGACACTTGCCGCAAGTCTAGACTCGAGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS-3UTR CAA 90 bp | CATCCTAGTGTTGCGTTAGCCTGGCTCTCCCCATTTTATTCAAGCACAAATTACGGAGTCCGCTGCCGGTaGTTAGGCAACCGACGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HPSVALAWLSPFYSSTNYGVRCR*LGNRRV Trigger: TACACGTCGGTTGCCTAACAACCGGCAGCGGACTCC...GTAATTTGTGCTTGAATAAAATGGGGAGAGCCAGGCTAACGCAACACTAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS TCA 90 bp | TTGGCCTCAAAGAAACACCAGGCAAGCCAGGCACTCCATCCAAGGTaGCGTTTGCTACCTATCGCTATATCTCTCCCTATCCCATATCTA | + |
|
Preference number: 5 (lower is better) Translates to: LASKKHQASQALHPR*RLLPIAISLPIPYL Trigger: TAGATATGGGATAGGGAGAGATATAGCGATAGGTAGCAAACGTCACCTTGGATGGAGTGCCTGGCTTGCCTGGTGTTTCTTTGAGGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS-3UTR CAA 90 bp | CGTTCTGTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCTTCTCACCCAACTCCTaGGCCACGCGTTTCAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: RSVFVDMWKCMTRETMQGFSPNS*ATRFRF Trigger: AAATCTGAAACGCGTGGCCAAGGAGTTGGGTGAGAA...GCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CAA 90 bp | TCTGTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAGATGCGCAGGAACTCTaGCTCACTGACCTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SVFVDMWKCMTRETMQGKDAQEL*LTDLSI Trigger: GATGGAGAGGTCAGTGAGCAAGAGTTCCTGCGCATC...TTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CAA 90 bp | GTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAATGCCGGATCTCCTGCTTTaGCTCTTCAGTAAGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFVDMWKCMTRETMQGKMPDLLL*LFSKLR Trigger: CCTGAGCTTACTGAAGAGCAAAAGCAGGAGATCCGG...CATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS GCA 90 bp | CAAAGAAACACCAGGCAAGCCAGGCACTCCATCCAAGGTGACGTTTaGTACCTATCGCTATATCTCTCCCTATCCCATATCTATTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: QRNTRQARHSIQGDV*YLSLYLSLSHIYFL Trigger: TAGGAAATAGATATGGGATAGGGAGAGATATAGCGATAGGTAGCAAACGTCACCTTGGATGGAGTGCCTGGCTTGCCTGGTGTTTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS TCA 90 bp | TTCAGTAAGCTCAGGCTTAGGGCTCATTCTTTTTCGCTGAGAACTTaGTGCCATGTTTGCCTTCTTAAAGTTGGAGGCCATAGCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSKLRLRAHSFSLRT*CHVCLLKVGGHSQR Trigger: CCTTTGGCTATGGCCTCCAACTTTAAGAAGGCAAACATGGCATCAAGTTCTCAGCGAAAAAGAATGAGCCCTAAGCCTGAGCTTACTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CAA 90 bp | GTGTTTGTGGATATGTGGAAATGCATGACGAGGGAAACGATGCAAGGCAAAATGTTTGCCTTCTTAAAGTaGGAGGCCATAGCCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VFVDMWKCMTRETMQGKMFAFLK*EAIAKG Trigger: TCCTTTGGCTATGGCCTCCAACTTTAAGAAGGCAAA...CATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCACATATCCACAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CAA 90 bp | AAATGCATGACGAGGGAAACGATGCAAGGCAAAATGGCAGGTGCTCAAAGCTTTAGGTGTAACATGTGCTaGTCTAAAGTCGTTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KCMTRETMQGKMAGAQSFRCNMC*SKVVLC Trigger: ACACAGAACGACTTTAGACAAGCACATGTTACACCT...AAAGCTTTGAGCACCTGCCATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CAA 90 bp | CTCAAGGTCACTATTAAAGTGATAAAGGGAGGTCCGTGGGGGAAAAGTTTGTGTTCCTTTTCTTCACGCTaGTGTGCTCTTGTTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LKVTIKVIKGGPWGKSLCSFSSR*CALVLL Trigger: AAGCAAAACAAGAGCACACAAGCGTGAAGAAAAGGA...ACACAAACTTTTCCCCCACGGACCTCCCTTTATCACTTTAATAGTGACCTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CAA 90 bp | ACATGTGCTTGTCTAAAGTCGTTCTGTGTTTGTGGATATGTGGAAATGCATGACGTCAAGAATGACTGCTaGTGGCAACACAGGTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: TCACLKSFCVCGYVEMHDVKNDC*WQHRCN Trigger: GTTACACCTGTGTTGCCACAAGCAGTCATTCTTGAC...GTCATGCATTTCCACATATCCACAAACACAGAACGACTTTAGACAAGCACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS-3UTR CAA 90 bp | ACATGTGCTTGTCTAAAGTCGTTCTGTGTTTGTGGATATGTGGAAATGCATGACACGCGTTTCAGATTTTaGAACGAAATCTTCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TCACLKSFCVCGYVEMHDTRFRF*NEIFPV Trigger: AACTGGGAAGATTTCGTTCAAAAATCTGAAACGCGT...GTCATGCATTTCCACATATCCACAAACACAGAACGACTTTAGACAAGCACATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS TCA 72 bp | GGAGCCCAAAGTAACATGATGGGAGGGCAGGCCTCCTaGTGCAGTTGCTACCTGGACTGCTCTGTGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: GAQSNMMGGQAS*CSCYLDCSVVT Trigger: TGTGACCACAGAGCAGTCCAGGTAGCAACTGCATCAGGAGGCCTGCCCTCCCATCATGTTACTTTGGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS CAA 72 bp | GAGTCTAGACTTGCGGCAAGTGTCAGGAAGCCCATTTaGGCCTCAAAGAAACACCAGGCAAGCCAGGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: ESRLAASVRKPI*ASKKHQASQAL Trigger: GAGTGCCTGGCTTGCCTGGTGTTTCTTTGAGGCCAAAATGGGCTTCCTGACACTTGCCGCAAGTCTAGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS CCA 72 bp | AGGCCTCCTGATGCAGTTGCTACCTGGACTGCTCTGTaGTCACATGACTGTTTTAACAGGAAGACGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: RPPDAVATWTAL*SHDCFNRKTPW Trigger: CCATGGCGTCTTCCTGTTAAAACAGTCATGTGACCACAGAGCAGTCCAGGTAGCAACTGCATCAGGAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS GCA 72 bp | ACCAGGCAAGCCAGGCACTCCATCCAAGGTGACGTTTaGTACCTATCGCTATATCTCTCCCTATCCCATATC | + |
|
Preference number: 6 (lower is better) Translates to: TRQARHSIQGDV*YLSLYLSLSHI Trigger: GATATGGGATAGGGAGAGATATAGCGATAGGTAGCAAACGTCACCTTGGATGGAGTGCCTGGCTTGCCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS TCA 72 bp | AAGAAACACCAGGCAAGCCAGGCACTCCATCCAAGGTaGCGTTTGCTACCTATCGCTATATCTCTCCCTATC | + |
|
Preference number: 6 (lower is better) Translates to: KKHQASQALHPR*RLLPIAISLPI Trigger: GATAGGGAGAGATATAGCGATAGGTAGCAAACGTCACCTTGGATGGAGTGCCTGGCTTGCCTGGTGTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS TCA 72 bp | GGAATTCTGTGGGAAGAGGTATCTGCTTGGAAGTCTTaGGAAAGAAGCACAAGGGCTTGTTTTGGGAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GILWEEVSAWKS*ERSTRACFGSP Trigger: TGGGCTCCCAAAACAAGCCCTTGTGCTTCTTTCTCAAGACTTCCAAGCAGATACCTCTTCCCACAGAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS CAA 72 bp | ATCGAAAAGATCAAAAGCTTCCCGGATCTCCTGCTTTaGCTCTTCAGTAAGCTCAGGCTTAGGGCTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: IEKIKSFPDLLL*LFSKLRLRAHS Trigger: AGAATGAGCCCTAAGCCTGAGCTTACTGAAGAGCAAAAGCAGGAGATCCGGGAAGCTTTTGATCTTTTCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS TCA 72 bp | TCAGTAAGCTCAGGCTTAGGGCTCATTCTTTTTCGCTaGGAACTTGATGCCATGTTTGCCTTCTTAAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SVSSGLGLILFR*ELDAMFAFLKL Trigger: CAACTTTAAGAAGGCAAACATGGCATCAAGTTCTCAGCGAAAAAGAATGAGCCCTAAGCCTGAGCTTACTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370277.5 |
||
| CDS TCA 72 bp | TCTCACCCAACTCCTTGGCCACGCGTTTCAGATTTTTaGACGAAATCTTCCCAGTTTCATCATCATCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SHPTPWPRVSDF*TKSSQFHHHQR Trigger: TCTTTGATGATGATGAAACTGGGAAGATTTCGTTCAAAAATCTGAAACGCGTGGCCAAGGAGTTGGGTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370277.5 ENST00000493482.1 |
||
| CDS CAA 72 bp | TTCTCACCCAACTCCTTGGCCACGCGTTTCAGATTTTaGAACGAAATCTTCCCAGTTTCATCATCATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FSPNSLATRFRF*NEIFPVSSSSK Trigger: CTTTGATGATGATGAAACTGGGAAGATTTCGTTCAAAAATCTGAAACGCGTGGCCAAGGAGTTGGGTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370277.5 ENST00000493482.1 |
||
| CDS TCA 72 bp | GCTATATCTCTCCCTATCCCATATCTATTTCCTAACTaGTTTGGAATTCTGTGGGAAGAGGTATCTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AISLPIPYLFPN*FGILWEEVSAW Trigger: CCAAGCAGATACCTCTTCCCACAGAATTCCAAATCAGTTAGGAAATAGATATGGGATAGGGAGAGATATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS CAA 90 bp | CTATCGCTATATCTCTCCCTATCCCATATCTATTTCCTAACTGATTaGGAATTCTGTGGGAAGAGGTATCTGCTTGGAAGTCTTGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSLYLSLSHIYFLTD*EFCGKRYLLGSLEK Trigger: TTTCTCAAGACTTCCAAGCAGATACCTCTTCCCACAGAATTCCAAATCAGTTAGGAAATAGATATGGGATAGGGAGAGATATAGCGATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||
| CDS CAA 72 bp | TATCTCTCCCTATCCCATATCTATTTCCTAACTGATTaGGAATTCTGTGGGAAGAGGTATCTGCTTGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: YLSLSHIYFLTD*EFCGKRYLLGS Trigger: ACTTCCAAGCAGATACCTCTTCCCACAGAATTCCAAATCAGTTAGGAAATAGATATGGGATAGGGAGAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493482.1 |
||