Pregenerated sensors for CETN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000177143Ensembl transcript IDs: ENST00000327228.5
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCACAGTGGAGCAGTTTACTGGGATTTGTAAAATAGAGCACTACTaGAATGCCAGACACTCTGACATCAACTATATGTCAGAGGGGCTA | + |
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Preference number: 1 (lower is better) Translates to: ATVEQFTGICKIEHY*NARHSDINYMSEGL Trigger: TAGCCCCTCTGACATATAGTTGATGTCAGAGTGTCTGGCATTTCAGTAGTGCTCTATTTTACAAATCCCAGTAAACTGCTCCACTGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR TCA 90 bp | CACTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCTCCAGGTTaGCTCTTGAGAATTAAAACCCAAAACTCACATTACAAGCATCTT | + |
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Preference number: 1 (lower is better) Translates to: HSNFRALCLTSCAPG*LLRIKTQNSHYKHL Trigger: AAGATGCTTGTAATGTGAGTTTTGGGTTTTAATTCTCAAGAGTCAACCTGGAGCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR GCA 90 bp | AACGAAGAATCATTTGCAGGTATAAAGCCAGTGAATAGTCAAAATTaGACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGATT | + |
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Preference number: 1 (lower is better) Translates to: NEESFAGIKPVNSQN*TTYYHPSKSILYKI Trigger: AATCTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCAATTTTGACTATTCACTGGCTTTATACCTGCAAATGATTCTTCGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAGCACAGGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTATCATGTGCTCCAGGTTaGCTCTTGAGAATTAAAACC | + |
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Preference number: 2 (lower is better) Translates to: SSAQGKWRAHSNFRALCLSCAPG*LLRIKT Trigger: GGTTTTAATTCTCAAGAGTCAACCTGGAGCACATGA...TAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCCTGTGCTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAGCACAGGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTACTCCAGGTTGACTCTTaGGAATTAAAACCCAAAACT | + |
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Preference number: 2 (lower is better) Translates to: SSAQGKWRAHSNFRALCLLQVDS*ELKPKT Trigger: AGTTTTGGGTTTTAATTCTCAAGAGTCAACCTGGAG...TAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCCTGTGCTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR-3UTR TCA 90 bp | ATTGCACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGATTATCTGTCCTCCAGATCAACAGATaGACAGCAAGTTCAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: IAQRTTTQASLFFIRLSVLQINR*TASSAQ Trigger: CTGTGCTGAACTTGCTGTTCATCTGTTGATCTGGAG...GACAGATAATCTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR-3UTR GCA 90 bp | AACAGAAAACAAGCAGTATTAACACATAAACAAGCCACAGTGGAGCAGTTTACTTTGTTTAACCTCATGTaGTCCAGGTTGACTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: NRKQAVLTHKQATVEQFTLFNLM*SRLTLE Trigger: CTCAAGAGTCAACCTGGAGCACATGAGGTTAAACAA...AGTAAACTGCTCCACTGTGGCTTGTTTATGTGTTAATACTGCTTGTTTTCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR-3UTR GCA 90 bp | ATTGCACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGATTATCTGTCGATTCCATCTCATTATaGTGGAACAATGACTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: IAQRTTTQASLFFIRLSVDSISL*WNNDWN Trigger: ATTCCAGTCATTGTTCCAGCATAATGAGATGGAATC...GACAGATAATCTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR-3UTR CCA 90 bp | TGCACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGATTATCTGTCCTTCCATCTCATTATGCTaGAACAATGACTGGAATTTA | + |
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Preference number: 2 (lower is better) Translates to: CTTYYHPSKSILYKIICPSISLC*NNDWNL Trigger: TAAATTCCAGTCATTGTTCCAGCATAATGAGATGGA...AGGACAGATAATCTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR-3UTR CAA 90 bp | AACAGAAAACAAGCAGTATTAACACATAAACAAGCCACAGTGGAGCAGTTTACTAAGGGAACCACATTTTaGTGTGTCCCAGAAGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: NRKQAVLTHKQATVEQFTKGTTF*CVPEAV Trigger: GACAGCTTCTGGGACACACAAAAATGTGGTTCCCTT...AGTAAACTGCTCCACTGTGGCTTGTTTATGTGTTAATACTGCTTGTTTTCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR TCA 72 bp | GAGCAGTTTACTGGGATTTGTAAAATAGAGCACTACTaGAATGCCAGACACTCTGACATCAACTATATGTCA | + |
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Preference number: 3 (lower is better) Translates to: EQFTGICKIEHY*NARHSDINYMS Trigger: TGACATATAGTTGATGTCAGAGTGTCTGGCATTTCAGTAGTGCTCTATTTTACAAATCCCAGTAAACTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR GCA 72 bp | TCATTTGCAGGTATAAAGCCAGTGAATAGTCAAAATTaGACAACGTACTACCACCCAAGCAAGTCTATTCTT | + |
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Preference number: 3 (lower is better) Translates to: SFAGIKPVNSQN*TTYYHPSKSIL Trigger: AAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCAATTTTGACTATTCACTGGCTTTATACCTGCAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CCA 90 bp | GGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCGCTCCTTCGCGTCGATaGTCCCACTTCCGTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: GQMEGALKLQGPLFNLMCAPSRR*SHFRPR Trigger: ACGTGGACGGAAGTGGGACCATCGACGCGAAGGAGC...GCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CCA 90 bp | GGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCTTCTCTTTTGGCCGGTaGAGGCAGCGCTGGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GQMEGALKLQGPLFNLMCFSFGR*RQRWAS Trigger: AGAAGCCCAGCGCTGCCTCCACCGGCCAAAAGAGAA...GCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CCA 90 bp | AAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCTCCAAGCCCAGCGCTCTCATaGCCACCTTCAGCTCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: KWRAHSNFRALCLTSCAPSPALS*PPSAPS Trigger: CGAAGGAGCTGAAGGTGGCCATGAGAGCGCTGGGCT...TGGAGCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CCA 90 bp | GGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCTCATCTCTTCCTTCCTaGGTTCGAAGCCCAGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: GQMEGALKLQGPLFNLMCSSLPS*VRSPAL Trigger: GAGCGCTGGGCTTCGAACCCAGGAAGGAAGAGATGA...GCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR GCA 90 bp | GGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCTTCTCGGACATCTTCTaGGTCATCACGGCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GQMEGALKLQGPLFNLMCFSDIF*VITARK Trigger: CTTCCTGGCCGTGATGACGCAGAAGATGTCCGAGAA...GCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| 3UTR CAA 72 bp | GGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTaGTTTAACCTCATGTGCTCCAGGTTGACTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: GQMEGALKLQGP*FNLMCSRLTLE Trigger: CTCAAGAGTCAACCTGGAGCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR GCA 90 bp | ACCCAAGCAAGTCTATTCTTTATAAGATTATCTGTCCTGAGCTCCGTAAGTTTGAGCCGGAAGCCATCCTaGCGCTCTGGCCGCCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: TQASLFFIRLSVLSSVSLSRKPS*RSGRRG Trigger: ACCACGGCGGCCAGAGCGGCAGGATGGCTTCCGGCT...CAAACTTACGGAGCTCAGGACAGATAATCTTATAAAGAATAGACTTGCTTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CCA 90 bp | CTTCAAACTGGTATTCAGCTAAGTGGACAGGCTAGGCAAATCTACTGGCAGATTGCCACCTTTCTCTTTTaGCCGGTGGAGGCAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LQTGIQLSGQARQIYWQIATFLF*PVEAAL Trigger: CAGCGCTGCCTCCACCGGCCAAAAGAGAAAGGTGGC...AATCTGCCAGTAGATTTGCCTAGCCTGTCCACTTAGCTGAATACCAGTTTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR TCA 90 bp | GAAGAAGGGACAGGCAGCCGCTGTCCTCTAAGGTTTCACAAAATGGAAGCAGGCTCATGTGCTCCAGGTTaGCTCTTGAGAATTAAAACC | + |
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Preference number: 4 (lower is better) Translates to: EEGTGSRCPLRFHKMEAGSCAPG*LLRIKT Trigger: GGTTTTAATTCTCAAGAGTCAACCTGGAGCACATGA...GCCTGCTTCCATTTTGTGAAACCTTAGAGGACAGCGGCTGCCTGTCCCTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR TCA 90 bp | GGGGGTGAAGAAGGGACAGGCAGCCGCTGTCCTCTAAGGTTTCACAAAATGGAAAAAATAGAGCACTACTaGAATGCCAGACACTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: GGEEGTGSRCPLRFHKMEKIEHY*NARHSD Trigger: GTCAGAGTGTCTGGCATTTCAGTAGTGCTCTATTTT...TTCCATTTTGTGAAACCTTAGAGGACAGCGGCTGCCTGTCCCTTCTTCACCCCC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR TCA 90 bp | CTTCAAACTGGTATTCAGCTAAGTGGACAGGCTAGGCAAATCTACTGGCAGATTGGCTGGTCTTCTTCATaGTCCGAAGGAACTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LQTGIQLSGQARQIYWQIGWSSS*SEGTPP Trigger: AGGAGGAGTTCCTTCGGATCATGAAGAAGACCAGCC...AATCTGCCAGTAGATTTGCCTAGCCTGTCCACTTAGCTGAATACCAGTTTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR TCA 90 bp | CTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCTCCAGGTTGACTCTTGAGCTCCAGATCAACAGATaGACAGCAAGTTCAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: LKLQGPLFNLMCSRLTLELQINR*TASSAQ Trigger: CTGTGCTGAACTTGCTGTTCATCTGTTGATCTGGAG...CTCAAGAGTCAACCTGGAGCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR GCA 90 bp | AGTTCAGCACAGGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTATTGTTTAACCTCATGTaGTCCAGGTTGACTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SSAQGKWRAHSNFRALCLLFNLM*SRLTLE Trigger: CTCAAGAGTCAACCTGGAGCACATGAGGTTAAACAA...TAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCCTGTGCTGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CCA 90 bp | GGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCGCTAGGCAAATCTACTaGCAGATTCCATCTCATTAT | + |
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Preference number: 4 (lower is better) Translates to: GQMEGALKLQGPLFNLMCARQIY*QIPSHY Trigger: ATAATGAGATGGAATCTGCCAGTAGATTTGCCTAGC...GCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CCA 90 bp | GGGGGTGAAGAAGGGACAGGCAGCCGCTGTCCTCTAAGGTTTCACAAAATGGAAATAAACAAGCCACAGTaGAGCAGTTTACTGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: GGEEGTGSRCPLRFHKMEINKPQ*SSLLGF Trigger: AAATCCCAGTAAACTGCTCCACTGTGGCTTGTTTAT...TTCCATTTTGTGAAACCTTAGAGGACAGCGGCTGCCTGTCCCTTCTTCACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR GCA 90 bp | GGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCGATTCCATCTCATTATaGTGGAACAATGACTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: GQMEGALKLQGPLFNLMCDSISL*WNNDWN Trigger: ATTCCAGTCATTGTTCCAGCATAATGAGATGGAATC...GCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR GCA 90 bp | GAAGAAGGGACAGGCAGCCGCTGTCCTCTAAGGTTTCACAAAATGGAAGCAGGCGAACGAAGAATCATTTaGAGGTATAAAGCCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: EEGTGSRCPLRFHKMEAGERRII*RYKASE Trigger: TTCACTGGCTTTATACCTGCAAATGATTCTTCGTTC...GCCTGCTTCCATTTTGTGAAACCTTAGAGGACAGCGGCTGCCTGTCCCTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR TCA 90 bp | AGTTCAGCACAGGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTATGGACAATTTACACATaGACGAAGAATCATTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSAQGKWRAHSNFRALCLWTIYT*TKNHLQ Trigger: CTGCAAATGATTCTTCGTTCATGTGTAAATTGTCCA...TAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCCTGTGCTGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR GCA 90 bp | TGCACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGATTATCTGTCCTGAGCTCGGGCTTAGGTaGCACCTTTCTCTTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: CTTYYHPSKSILYKIICPELGLR*HLSLLA Trigger: GGCCAAAAGAGAAAGGTGGCACCTAAGCCCGAGCTC...AGGACAGATAATCTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR GCA 90 bp | AATAGTCAAAATTGCACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGTCGTCGATCATCTCCTaGAGCTCCTCATCCGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: NSQNCTTYYHPSKSILYKSSIIS*SSSSVR Trigger: CCTCACGGATGAGGAGCTGCAGGAGATGATCGACGA...CTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCAATTTTGACTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CCA 90 bp | AATAGTCAAAATTGCACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGTCTCCCCCAGCTCGTTaGCCACACGCTTCAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: NSQNCTTYYHPSKSILYKSPPAR*PHASGF Trigger: AAAACCTGAAGCGTGTGGCCAACGAGCTGGGGGAGA...CTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCAATTTTGACTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CCA 90 bp | AAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCTCCATCCATCTCATTATGCTaGAACAATGACTGGAATTTA | + |
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Preference number: 4 (lower is better) Translates to: KWRAHSNFRALCLTSCAPSISLC*NNDWNL Trigger: TAAATTCCAGTCATTGTTCCAGCATAATGAGATGGA...TGGAGCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR TCA 90 bp | AACAGAAAACAAGCAGTATTAACACATAAACAAGCCACAGTGGAGCAGTTTACTCACGCTTCAGGTTTTTaGACGAGATCTTCCCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: NRKQAVLTHKQATVEQFTHASGF*TRSSRS Trigger: AGACCGGGAAGATCTCGTTCAAAAACCTGAAGCGTG...AGTAAACTGCTCCACTGTGGCTTGTTTATGTGTTAATACTGCTTGTTTTCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR GCA 90 bp | AATAGTCAAAATTGCACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGGTCGAAGAGGTCAAATaGTTCCCGAACTTCTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: NSQNCTTYYHPSKSILYKVEEVK*FPNFLL Trigger: AAGCAAGAAGTTCGGGAAGCATTTGACCTCTTCGAC...CTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCAATTTTGACTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR TCA 90 bp | AACAGAAAACAAGCAGTATTAACACATAAACAAGCCACAGTGGAGCAGTTTACTCTCCAGGTTGACTCTTaGGAATTAAAACCCAAAACT | + |
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Preference number: 4 (lower is better) Translates to: NRKQAVLTHKQATVEQFTLQVDS*ELKPKT Trigger: AGTTTTGGGTTTTAATTCTCAAGAGTCAACCTGGAG...AGTAAACTGCTCCACTGTGGCTTGTTTATGTGTTAATACTGCTTGTTTTCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR TCA 90 bp | ATTGCACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGATTATCTGTCAAATGCCAGACACTCTaGCATCAACTATATGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: IAQRTTTQASLFFIRLSVKCQTL*HQLYVR Trigger: TCTGACATATAGTTGATGTCAGAGTGTCTGGCATTT...GACAGATAATCTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CCA 90 bp | AATAGTCAAAATTGCACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGTGTTTTCCTTCAAACTaGTATTCAGCTAAGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: NSQNCTTYYHPSKSILYKCFPSN*YSAKWT Trigger: TGTCCACTTAGCTGAATACCAGTTTGAAGGAAAACA...CTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCAATTTTGACTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS TCA 90 bp | GTGCCACCTTTCTCTTTTGGCCGGTGGAGGCAGCGCTGGGCTTCTTaGAGCCGGAAGCCATCCTGCCGCTCTGGCCGCCGTGGTCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: VPPFSFGRWRQRWAS*SRKPSCRSGRRGPN Trigger: GTTGGGACCACGGCGGCCAGAGCGGCAGGATGGCTTCCGGCTTCAAGAAGCCCAGCGCTGCCTCCACCGGCCAAAAGAGAAAGGTGGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS CCA 90 bp | CGAAGCCCAGCGCTCTCATGGCCACCTTCAGCTCCTTCGCGTCGATaGTCCCACTTCCGTCCACGTCGAAGAGGTCAAATGCTTCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: RSPALSWPPSAPSRR*SHFRPRRRGQMLPE Trigger: TTCGGGAAGCATTTGACCTCTTCGACGTGGACGGAAGTGGGACCATCGACGCGAAGGAGCTGAAGGTGGCCATGAGAGCGCTGGGCTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CAA 90 bp | GGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCGCAGCGCTGGGCTTCTaGAAGCCGGAAGCCATCCTG | + |
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Preference number: 5 (lower is better) Translates to: GQMEGALKLQGPLFNLMCAALGF*KPEAIL Trigger: CAGGATGGCTTCCGGCTTCAAGAAGCCCAGCGCTGC...GCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS CCA 90 bp | TTTTCTTCATCTCTTCCTTCCTGGGTTCGAAGCCCAGCGCTCTCATaGCCACCTTCAGCTCCTTCGCGTCGATGGTCCCACTTCCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: FSSSLPSWVRSPALS*PPSAPSRRWSHFRP Trigger: TGGACGGAAGTGGGACCATCGACGCGAAGGAGCTGAAGGTGGCCATGAGAGCGCTGGGCTTCGAACCCAGGAAGGAAGAGATGAAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CAA 90 bp | AGTTCAGCACAGGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTATGCCACCTTTCTCTTTaGGCCGGTGGAGGCAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: SSAQGKWRAHSNFRALCLCHLSL*AGGGSA Trigger: AGCGCTGCCTCCACCGGCCAAAAGAGAAAGGTGGCA...TAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCCTGTGCTGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS TCA 90 bp | CCGTCCACGTCGAAGAGGTCAAATGCTTCCCGAACTTCTTGCTTCTaGTCCTCAGTGAGCTCGGGCTTAGGTGCCACCTTTCTCTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: PSTSKRSNASRTSCF*SSVSSGLGATFLFW Trigger: CCAAAAGAGAAAGGTGGCACCTAAGCCCGAGCTCACTGAGGATCAGAAGCAAGAAGTTCGGGAAGCATTTGACCTCTTCGACGTGGACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CAA 90 bp | CTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCTCCAGGTTGACTCTTGAGTTCTCCCCCAGCTCGTaGGCCACACGCTTCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LKLQGPLFNLMCSRLTLEFSPSS*ATRFRF Trigger: AAACCTGAAGCGTGTGGCCAACGAGCTGGGGGAGAA...CTCAAGAGTCAACCTGGAGCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CAA 90 bp | AGTTCAGCACAGGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTATGCTTCCCGAACTTCTaGCTTCTGATCCTCAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSAQGKWRAHSNFRALCLCFPNF*LLILSE Trigger: CTCACTGAGGATCAGAAGCAAGAAGTTCGGGAAGCA...TAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCCTGTGCTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CAA 90 bp | GGGCAAATGGAGGGCGCACTCAAACTTCAGGGCCCTTTGTTTAACCTCATGTGCAAGGGAACCACATTTTaGTGTGTCCCAGAAGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: GQMEGALKLQGPLFNLMCKGTTF*CVPEAV Trigger: GACAGCTTCTGGGACACACAAAAATGTGGTTCCCTT...GCACATGAGGTTAAACAAAGGGCCCTGAAGTTTGAGTGCGCCCTCCATTTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CAA 90 bp | TGCACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGATTATCTGTCCTAAACTTCAGGGCCCTTaGTTTAACCTCATGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: CTTYYHPSKSILYKIICPKLQGP*FNLMCS Trigger: GGAGCACATGAGGTTAAACAAAGGGCCCTGAAGTTT...AGGACAGATAATCTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS-3UTR CAA 90 bp | AATAGTCAAAATTGCACAACGTACTACCACCCAAGCAAGTCTATTCTTTATAAGACACGCTTCAGGTTTTaGAACGAGATCTTCCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: NSQNCTTYYHPSKSILYKTRFRF*NEIFPV Trigger: GACCGGGAAGATCTCGTTCAAAAACCTGAAGCGTGT...CTTATAAAGAATAGACTTGCTTGGGTGGTAGTACGTTGTGCAATTTTGACTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS CAA 90 bp | GGTGCCACCTTTCTCTTTTGGCCGGTGGAGGCAGCGCTGGGCTTCTaGAAGCCGGAAGCCATCCTGCCGCTCTGGCCGCCGTGGTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: GATFLFWPVEAALGF*KPEAILPLWPPWSQ Trigger: TTGGGACCACGGCGGCCAGAGCGGCAGGATGGCTTCCGGCTTCAAGAAGCCCAGCGCTGCCTCCACCGGCCAAAAGAGAAAGGTGGCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS CAA 72 bp | TTTCTCTTTTGGCCGGTGGAGGCAGCGCTGGGCTTCTaGAAGCCGGAAGCCATCCTGCCGCTCTGGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: FLFWPVEAALGF*KPEAILPLWPP Trigger: CGGCGGCCAGAGCGGCAGGATGGCTTCCGGCTTCAAGAAGCCCAGCGCTGCCTCCACCGGCCAAAAGAGAAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS CCA 72 bp | TCAGTGAGCTCGGGCTTAGGTGCCACCTTTCTCTTTTaGCCGGTGGAGGCAGCGCTGGGCTTCTTGAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SVSSGLGATFLF*PVEAALGFLKP Trigger: CGGCTTCAAGAAGCCCAGCGCTGCCTCCACCGGCCAAAAGAGAAAGGTGGCACCTAAGCCCGAGCTCACTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS CCA 72 bp | TCTCTTCCTTCCTGGGTTCGAAGCCCAGCGCTCTCATaGCCACCTTCAGCTCCTTCGCGTCGATGGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SLPSWVRSPALS*PPSAPSRRWSH Trigger: GTGGGACCATCGACGCGAAGGAGCTGAAGGTGGCCATGAGAGCGCTGGGCTTCGAACCCAGGAAGGAAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS CAA 72 bp | CTCAGTGAGCTCGGGCTTAGGTGCCACCTTTCTCTTTaGGCCGGTGGAGGCAGCGCTGGGCTTCTTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LSELGLRCHLSL*AGGGSAGLLEA Trigger: GGCTTCAAGAAGCCCAGCGCTGCCTCCACCGGCCAAAAGAGAAAGGTGGCACCTAAGCCCGAGCTCACTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS CCA 72 bp | GCGCTCTCATGGCCACCTTCAGCTCCTTCGCGTCGATaGTCCCACTTCCGTCCACGTCGAAGAGGTCAAATG | + |
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Preference number: 6 (lower is better) Translates to: ALSWPPSAPSRR*SHFRPRRRGQM Trigger: CATTTGACCTCTTCGACGTGGACGGAAGTGGGACCATCGACGCGAAGGAGCTGAAGGTGGCCATGAGAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS CAA 90 bp | CTTCTGATCCTCAGTGAGCTCGGGCTTAGGTGCCACCTTTCTCTTTaGGCCGGTGGAGGCAGCGCTGGGCTTCTTGAAGCCGGAAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLILSELGLRCHLSL*AGGGSAGLLEAGSH Trigger: ATGGCTTCCGGCTTCAAGAAGCCCAGCGCTGCCTCCACCGGCCAAAAGAGAAAGGTGGCACCTAAGCCCGAGCTCACTGAGGATCAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS GCA 72 bp | TTCTTGCTTCTGATCCTCAGTGAGCTCGGGCTTAGGTaGCACCTTTCTCTTTTGGCCGGTGGAGGCAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: FLLLILSELGLR*HLSLLAGGGSA Trigger: AGCGCTGCCTCCACCGGCCAAAAGAGAAAGGTGGCACCTAAGCCCGAGCTCACTGAGGATCAGAAGCAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS CAA 90 bp | CCCACTTCCGTCCACGTCGAAGAGGTCAAATGCTTCCCGAACTTCTaGCTTCTGATCCTCAGTGAGCTCGGGCTTAGGTGCCACCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PTSVHVEEVKCFPNF*LLILSELGLRCHLS Trigger: AGAAAGGTGGCACCTAAGCCCGAGCTCACTGAGGATCAGAAGCAAGAAGTTCGGGAAGCATTTGACCTCTTCGACGTGGACGGAAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS TCA 72 bp | TCTCCCCCAGCTCGTTGGCCACACGCTTCAGGTTTTTaGACGAGATCTTCCCGGTCTCATCGTCATCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SPPARWPHASGF*TRSSRSHRHQR Trigger: TCTTTGATGACGATGAGACCGGGAAGATCTCGTTCAAAAACCTGAAGCGTGTGGCCAACGAGCTGGGGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS CAA 72 bp | TTCTCCCCCAGCTCGTTGGCCACACGCTTCAGGTTTTaGAACGAGATCTTCCCGGTCTCATCGTCATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: FSPSSLATRFRF*NEIFPVSSSSK Trigger: CTTTGATGACGATGAGACCGGGAAGATCTCGTTCAAAAACCTGAAGCGTGTGGCCAACGAGCTGGGGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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| CDS TCA 72 bp | TCGAAGAGGTCAAATGCTTCCCGAACTTCTTGCTTCTaGTCCTCAGTGAGCTCGGGCTTAGGTGCCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: SKRSNASRTSCF*SSVSSGLGATF Trigger: AAAGGTGGCACCTAAGCCCGAGCTCACTGAGGATCAGAAGCAAGAAGTTCGGGAAGCATTTGACCTCTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327228.5 |
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