RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CES4A (Homo sapiens)

Ensembl gene IDs: ENSG00000172824

Ensembl transcript IDs: ENST00000535543.5, ENST00000535696.1, ENST00000535948.1, ENST00000538199.5, ENST00000540579.6, ENST00000540947.6, ENST00000543561.1, ENST00000544478.1, ENST00000544986.1, ENST00000567587.6, ENST00000648724.2

Found 773 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTaGATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTGAG +
Preference number: 1 (lower is better)
Translates to: PRAWMVGANPSLAPS*IATLRIASASQVFE
Trigger: CTCAAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
3UTR GCA 90 bp CCTTGGTCCCTGATAGTGCCCTCAGGCAGTTTACCAGGATCTGTGTaGTGTTGTGGTTGCATCCAGCCAGGTGGGCAACCTTCTTGGCCA +
Preference number: 1 (lower is better)
Translates to: PWSLIVPSGSLPGSV*CCGCIQPGGQPSWP
Trigger: TGGCCAAGAAGGTTGCCCACCTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCTGAGGGCACTATCAGGGACCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR GCA 90 bp AGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAG +
Preference number: 1 (lower is better)
Translates to: SEVEGHHGMSGWKGQ*RSHTTGKSSSFGLE
Trigger: CTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR CCA 90 bp CTGGATGTCAACAGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTaGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGC +
Preference number: 1 (lower is better)
Translates to: LDVNSEVEGHHGMSG*KGQCRSHTTGKSSS
Trigger: GCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACTGTTGACATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR CCA 90 bp ATGAAAAGTCTGAATAACGCGGTGCCACTCTGGGAAATGGCCCGATaGAAGAGACCCGAGGCTAGGGGTGACATCATCAGTCCTGAGATG +
Preference number: 1 (lower is better)
Translates to: MKSLNNAVPLWEMAR*KRPEARGDIISPEM
Trigger: CATCTCAGGACTGATGATGTCACCCCTAGCCTCGGGTCTCTTCCATCGGGCCATTTCCCAGAGTGGCACCGCGTTATTCAGACTTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR CCA 90 bp AGACAGGGAGGCCGGCATCTCGGTGGTAGTGAGCAGTCTGCAGTGTaGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACGGT +
Preference number: 1 (lower is better)
Translates to: RQGGRHLGGSEQSAV*HTRKWHLELCPSYG
Trigger: ACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGATGCCGGCCTCCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR CCA 90 bp CCAGTCATGCTCATTGACATTGTCCAGGTACTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGATATTCAACAGGGTGCGGGTACTCCA +
Preference number: 1 (lower is better)
Translates to: PVMLIDIVQVLLHHK*YLLLGDIQQGAGTP
Trigger: TGGAGTACCCGCACCCTGTTGAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCTGGACAATGTCAATGAGCATGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR CCA 90 bp AGTTCAGTTGGAGGAATCTCATCTTGTTGGACACACGCATCACCTTaGTCCCTGATAGTGCCCTCAGGCAGTTTACCAGGATCTGTGTGC +
Preference number: 1 (lower is better)
Translates to: SSVGGISSCWTHASP*SLIVPSGSLPGSVC
Trigger: GCACACAGATCCTGGTAAACTGCCTGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCAACTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR CCA 90 bp CATCTCGGTGGTAGTGAGCAGTCTGCAGTGTGGCATACACGAAAGTaGCATCTTGAACTATGTCCATCATACGGTTTCGTAGCATCTTCC +
Preference number: 1 (lower is better)
Translates to: HLGGSEQSAVWHTRK*HLELCPSYGFVASS
Trigger: GGAAGATGCTACGAAACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR CCA 90 bp TTCCCATCATTGGGGTTTCTCGGTGGTAGTGAGCAGTCTGCAGTGTaGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACGGT +
Preference number: 1 (lower is better)
Translates to: FPSLGFLGGSEQSAV*HTRKWHLELCPSYG
Trigger: ACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGAAACCCCAATGATGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR CCA 90 bp TTTCTCGGTGGTAGTGAGCAGTCTGCAGTGTGGCATACACGAAAGTaGCATCTTGAACTATGTCCATCATACGGTTTCGTAGCATCTTCC +
Preference number: 1 (lower is better)
Translates to: FLGGSEQSAVWHTRK*HLELCPSYGFVASS
Trigger: GGAAGATGCTACGAAACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR CCA 90 bp CCAGTCATGCTCATTGACATTGTCCAGGTACTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGATATTATAAGGCAAGAGCCAATTGAA +
Preference number: 1 (lower is better)
Translates to: PVMLIDIVQVLLHHK*YLLLGDIIRQEPIE
Trigger: TTCAATTGGCTCTTGCCTTATAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCTGGACAATGTCAATGAGCATGACTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR-3UTR GCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCGCAGCAGGGAGCTCCTaGAGTTCTAAACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAAAGSS*SSKLGW
Trigger: CCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR TCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCGCCTCCAGGCCAATGTaGACAGACAGGCACAAGGTT +
Preference number: 2 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAASRPM*TDRHKV
Trigger: AACCTTGTGCCTGTCTGTTCACATTGGCCTGGAGGC...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR GCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCATGCCGAGCCTGTGCTaGAGAAACACCAGCACCACT +
Preference number: 2 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAMPSLC*RNTSTT
Trigger: AGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCAT...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR-3UTR GCA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGC +
Preference number: 2 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGGWKGQ*RSHTTG
Trigger: GCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACACCAGGGCCTGGATGGTaGGGGCAAACCCCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETPGPGW*GQTPLW
Trigger: CCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGG...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TCCCCTGGGTCAGGAGCACCAAAGGGTCATCTGGGATCACCACACCATCCACCAGCTCTAGCTTTGGCCTaGAGGCAGCAGGGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: SPGSGAPKGHLGSPHHPPALALA*RQQGAP
Trigger: AGGAGCTCCCTGCTGCCTCCAGGCCAAAGCTAGAGC...TGGTGGATGGTGTGGTGATCCCAGATGACCCTTTGGTGCTCCTGACCCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR GCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGC +
Preference number: 2 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGGWKGQ*RSHTTG
Trigger: GCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp GCACAGATGAAACCTTCCCCTGGGTCAGGAGCACCAAAGGGTCATCTGGGATCACCAGGGCCTGGATGGTaGGGGCAAACCCCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: AQMKPSPGSGAPKGHLGSPGPGW*GQTPLW
Trigger: CCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGG...TGATCCCAGATGACCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp GTCAACAGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTGGAAAGGGCAGTGCCCAGGGCCTGGATGGTaGGGGCAAACCCCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: VNSEVEGHHGMSGWKGQCPGPGW*GQTPLW
Trigger: CCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGG...GCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACTGTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCCCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCGCTCTAGCTTTGGCCTaGAGGCAGCAGGGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGALALA*RQQGAP
Trigger: AGGAGCTCCCTGCTGCCTCCAGGCCAAAGCTAGAGC...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp GTTGTAGCGTGGCCAGCAGGGCAGATTCCCATCATTGGGGTTTCCTGTGCGGGCTACATCTCATCCCCATaGTCTGCCCCATCAGTGCGG +
Preference number: 2 (lower is better)
Translates to: VVAWPAGQIPIIGVSCAGYISSP*SAPSVR
Trigger: CCGCACTGATGGGGCAGACCATGGGGATGAGATGTA...GCCCGCACAGGAAACCCCAATGATGGGAATCTGCCCTGCTGGCCACGCTACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR-3UTR TCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCTCCAGTCATGCTCATTaGCATTGTCCAGGTACTCCT +
Preference number: 2 (lower is better)
Translates to: PRAWMVGANPSLAPSCIASSHAH*HCPGTP
Trigger: AGGAGTACCTGGACAATGTCAATGAGCATGACTGGA...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR GCA 90 bp CAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCAGCCAGGTGGGCAACCGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGC +
Preference number: 2 (lower is better)
Translates to: QFTRICVLLWLHPARWATGWKGQ*RSHTTG
Trigger: GCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC...GGTTGCCCACCTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR GCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCTCATCAGTCCTGAGATaGTCATGGCCCCCGCCGACT +
Preference number: 2 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGSSVLR*SWPPPT
Trigger: AGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGA...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp TGCCCTCAGGCAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCAGCCAGCCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: CPQAVYQDLCAVVVASSQPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...CTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCTGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTCCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: CQAGKGSAGPTQQAKALAPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCGCTCTAGCTTTGGCCTaGAGGCAGCAGGGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: KLGWVELLSPGMSMASLPALALA*RQQGAP
Trigger: AGGAGCTCCCTGCTGCCTCCAGGCCAAAGCTAGAGC...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR TCA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGAGCCTCCAGGCCAATGTaGACAGACAGGCACAAGGTT +
Preference number: 2 (lower is better)
Translates to: PLCIDFGVALGEISVGGRASRPM*TDRHKV
Trigger: AACCTTGTGCCTGTCTGTTCACATTGGCCTGGAGGC...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR GCA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCGCAGCAGGGAGCTCCTaGAGTTCTAAACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: KLGWVELLSPGMSMASLPAAGSS*SSKLGW
Trigger: CCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGCCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LPKVCSMSQPALGLQANVPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp CAGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACGGTGTTGACAGGGCCTaGCCTAACTGGATGTCAACA +
Preference number: 2 (lower is better)
Translates to: QGQWQSGSTSHKKESQGDGVDRA*PNWMST
Trigger: TGTTGACATCCAGTTAGGCCAGGCCCTGTCAACACC...GTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTGGGAAATGGCCCGATaGAAGAGACCCGAGGCTAGG +
Preference number: 2 (lower is better)
Translates to: CQAGKGSAGPTQQAKALAWEMAR*KRPEAR
Trigger: CCTAGCCTCGGGTCTCTTCCATCGGGCCATTTCCCA...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCGATGAAACCTTCCCCTaGGTCAGGAGCACCAAAGGG +
Preference number: 2 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGDETFP*VRSTKG
Trigger: CCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATC...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR GCA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGC +
Preference number: 2 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCGWKGQ*RSHTTG
Trigger: GCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAAGTAGAGGGGCATCATaGGATGTCAGGCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETSRGAS*DVRLER
Trigger: CCTTTCCAGCCTGACATCCCATGATGCCCCTCTACT...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGAAGTAGAGGGGCATCATaGGATGTCAGGCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: PLCIDFGVALGEISVGGRSRGAS*DVRLER
Trigger: CCTTTCCAGCCTGACATCCCATGATGCCCCTCTACT...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCGGTGTTGACAGGGCCTaGCCTAACTGGATGTCAACA +
Preference number: 2 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGGVDRA*PNWMST
Trigger: TGTTGACATCCAGTTAGGCCAGGCCCTGTCAACACC...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp GGCACAGATGAAACCTTCCCCTGGGTCAGGAGCACCAAAGGGTCATCTGGGATCATCTGTGTGCTGTTGTaGTTGCATCCAGCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: GTDETFPWVRSTKGSSGIICVLL*LHPARW
Trigger: CCACCTGGCTGGATGCAACCACAACAGCACACAGAT...GATCCCAGATGACCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR GCA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGAAGGATGGATGGTAAATaGCAAGCTGGGTGCAGTGAC +
Preference number: 2 (lower is better)
Translates to: PLCIDFGVALGEISVGGRRMDGK*QAGCSD
Trigger: GTCACTGCACCCAGCTTGGCATTTACCATCCATCCT...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR GCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCAGGATGGATGGTAAATaGCAAGCTGGGTGCAGTGAC +
Preference number: 2 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGRMDGK*QAGCSD
Trigger: GTCACTGCACCCAGCTTGGCATTTACCATCCATCCT...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR GCA 90 bp ATCACCACACCATCCACCACAGGGCTCATGGACCAGATAATCTCTTCCGGGTCTGTGTGCTGTTGTGGTTaGATCCAGCCAGGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: ITTPSTTGLMDQIISSGSVCCCG*IQPGGQ
Trigger: TTGCCCACCTGGCTGGATGCAACCACAACAGCACAC...AGACCCGGAAGAGATTATCTGGTCCATGAGCCCTGTGGTGGATGGTGTGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGGCCTGGATGGTaGGGGCAAACCCCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPPGPGW*GQTPLW
Trigger: CCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGG...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp GAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCAGGGCCTGGATGGTaGGGGCAAACCCCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: ERRSQTTKSLLHVTTCPRPGPGW*GQTPLW
Trigger: CCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGG...CCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATCCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: KLPKVCSMSQPALGLQANPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp CAGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: QGQWQSGSTSHKKESQGDSSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...GTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCCCTGTGTATAGACTTTaGAGTGGCCCTGGGGGAGAT +
Preference number: 2 (lower is better)
Translates to: KLGWVELLSPGMSMASLPPVYRL*SGPGGD
Trigger: ATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGG...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTCCTGTGTATAGACTTTaGAGTGGCCCTGGGGGAGAT +
Preference number: 2 (lower is better)
Translates to: CQAGKGSAGPTQQAKALAPVYRL*SGPGGD
Trigger: ATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGG...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTTGCCACTCTGGGAAATaGCCCGATGGAAGAGACCCG +
Preference number: 2 (lower is better)
Translates to: LKRPPLCIDFGVALGEISCHSGK*PDGRDP
Trigger: CGGGTCTCTTCCATCGGGCCATTTCCCAGAGTGGCA...ACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR TCA 90 bp GAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGGTCACAAGGAGACATTaGAGGGTGGGAGGATTTGAA +
Preference number: 2 (lower is better)
Translates to: ETTPVYRLWSGPGGDKCGVTRRH*RVGGFE
Trigger: TTCAAATCCTCCCACCCTTCAATGTCTCCTTGTGAC...CCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR TCA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGAAGACAGGCACAAGGTTaGGCAGGATGGATGGTAAAT +
Preference number: 2 (lower is better)
Translates to: PLCIDFGVALGEISVGGRRQAQG*AGWMVN
Trigger: ATTTACCATCCATCCTGCTCAACCTTGTGCCTGTCT...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR TCA 90 bp TTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGCCTCCAGGCCAATGTaGACAGACAGGCACAAGGTT +
Preference number: 2 (lower is better)
Translates to: LKRPPLCIDFGVALGEISASRPM*TDRHKV
Trigger: AACCTTGTGCCTGTCTGTTCACATTGGCCTGGAGGC...ACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR GCA 90 bp ATCTGGGATCACCACACCATCCACCACAGGGCTCATGGACCAGATAATCTCTTCAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACC +
Preference number: 2 (lower is better)
Translates to: IWDHHTIHHRAHGPDNLFKMPSL*CRNTST
Trigger: GGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTT...GAAGAGATTATCTGGTCCATGAGCCCTGTGGTGGATGGTGTGGTGATCCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR-3UTR CCA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTCCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp GGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: GWKGQCRSHTTGKSSSFGSSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...GCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCTCTAGCTTTGGCCTaGAGGCAGCAGGGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPALALA*RQQGAP
Trigger: AGGAGCTCCCTGCTGCCTCCAGGCCAAAGCTAGAGC...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp ATCACCACACCATCCACCACAGGGCTCATGGACCAGATAATCTCTTCCGGGTCTGGTGTTGACAGGGCCTaGCCTAACTGGATGTCAACA +
Preference number: 2 (lower is better)
Translates to: ITTPSTTGLMDQIISSGSGVDRA*PNWMST
Trigger: TGTTGACATCCAGTTAGGCCAGGCCCTGTCAACACC...AGACCCGGAAGAGATTATCTGGTCCATGAGCCCTGTGGTGGATGGTGTGGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAGGAGACATTGAAGGGTaGGAGGATTTGAAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETGDIEG*EDLKKG
Trigger: TCCCTTCTTCAAATCCTCCCACCCTTCAATGTCTCC...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTGTCCTGAGATGCTCATaGCCCCCGCCGACTGGCCGA +
Preference number: 2 (lower is better)
Translates to: SASQVFETGTDSSKKPSSVLRCS*PPPTGR
Trigger: TCGGCCAGTCGGCGGGGGCCATGAGCATCTCAGGAC...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp ATCACCACACCATCCACCACAGGGCTCATGGACCAGATAATCTCTTCCGGGTCTGGTGGGCAACCTTCTTaGCCACTTTCAGTGGGTTAC +
Preference number: 2 (lower is better)
Translates to: ITTPSTTGLMDQIISSGSGGQPS*PLSVGY
Trigger: GTAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACC...AGACCCGGAAGAGATTATCTGGTCCATGAGCCCTGTGGTGGATGGTGTGGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp TCATCTTGTTGGACACACGCATCACCTTGGTCCCTGATAGTGCCCTCAGGCAGTATCTGTGTGCTGTTGTaGTTGCATCCAGCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: SSCWTHASPWSLIVPSGSICVLL*LHPARW
Trigger: CCACCTGGCTGGATGCAACCACAACAGCACACAGAT...ACTGCCTGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTCCAACAAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGATCTTCCGGGTCTCTCTaGAAGTTCAGTTGGAGGAAT +
Preference number: 2 (lower is better)
Translates to: PLCIDFGVALGEISVGGRSSGSL*KFSWRN
Trigger: ATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGA...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp ATCACCACACCATCCACCACAGGGCTCATGGACCAGATAATCTCTTCCGGGTCTCACCAAAGGGTCATCTaGGATCACCACACCATCCAC +
Preference number: 2 (lower is better)
Translates to: ITTPSTTGLMDQIISSGSHQRVI*DHHTIH
Trigger: GTGGATGGTGTGGTGATCCCAGATGACCCTTTGGTG...AGACCCGGAAGAGATTATCTGGTCCATGAGCCCTGTGGTGGATGGTGTGGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp GGGTTTCTCGGTGGTAGTGAGCAGTCTGCAGTGTGGCATACACGAAAGTGGCATCTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGAT +
Preference number: 2 (lower is better)
Translates to: GFLGGSEQSAVWHTRKWHLLHHK*YLLLGD
Trigger: ATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAG...ATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR-3UTR CCA 90 bp GTTGTAGCGTGGCCAGCAGGGCAGATTCCCATCATTGGGGTTTCCTGTGCGGGCTGGCATACACGAAAGTaGCATCTTGAACTATGTCCA +
Preference number: 2 (lower is better)
Translates to: VVAWPAGQIPIIGVSCAGWHTRK*HLELCP
Trigger: TGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA...GCCCGCACAGGAAACCCCAATGATGGGAATCTGCCCTGCTGGCCACGCTACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR-3UTR CCA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTATGGCCCCCGCCGACTaGCCGAACAGGGTCACATTT +
Preference number: 2 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPMAPAD*PNRVTF
Trigger: AAATGTGACCCTGTTCGGCCAGTCGGCGGGGGCCAT...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR-3UTR TCA 90 bp ACTTTTCATCCTTGTTGTAGCGTGGCCAGCAGGGCAGATTCCCATCATTGGGGTCATCAGTGCGGGGTTTaGCGATTATTCCACGAGCGT +
Preference number: 2 (lower is better)
Translates to: TFHPCCSVASRADSHHWGHQCGV*RLFHER
Trigger: ACGCTCGTGGAATAATCGTCAAACCCCGCACTGATG...ACCCCAATGATGGGAATCTGCCCTGCTGGCCACGCTACAACAAGGATGAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR-3UTR GCA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCATCTTTGGCTCCTTCCTaGATAGCCACCCTTAGAATT +
Preference number: 2 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPSLAPS*IATLRI
Trigger: AATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGA...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
3UTR-3UTR GCA 90 bp CAGTCTGCAGTGTGGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGC +
Preference number: 2 (lower is better)
Translates to: QSAVWHTRKWHLELCPSYGWKGQ*RSHTTG
Trigger: GCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC...GTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp CAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCAGCCAGGTGGGCAACCTCTTCCGGGTCTCTCTaGAAGTTCAGTTGGAGGAAT +
Preference number: 2 (lower is better)
Translates to: QFTRICVLLWLHPARWATSSGSL*KFSWRN
Trigger: ATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGA...GGTTGCCCACCTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp ACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCACTCTTGTGGTCAGGGTCACATTTCCTaGGTCTCCCCCGAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: THPKSHLLLLELHAHSCGQGHIS*VSPEGC
Trigger: GCAGCCTTCGGGGGAGACCCAGGAAATGTGACCCTG...ACCACAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR-3UTR TCA 90 bp GACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCAAGGTAGGGCACAGATaGAACCTTCCCCTGGGTCAG +
Preference number: 2 (lower is better)
Translates to: DWYRLIQKAIFFSLSFMPKVGHR*NLPLGQ
Trigger: CTGACCCAGGGGAAGGTTTCATCTGTGCCCTACCTT...GGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGTCTGTACCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR GCA 90 bp TCCAGGTACTCCTCCACCACAAGTGGTACCTGCTCCTTGGTGATATTCAACAGGAGGATGGATGGTAAATaGCAAGCTGGGTGCAGTGAC +
Preference number: 2 (lower is better)
Translates to: SRYSSTTSGTCSLVIFNRRMDGK*QAGCSD
Trigger: GTCACTGCACCCAGCTTGGCATTTACCATCCATCCT...CCTGTTGAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR-3UTR CCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: LPKVCSMSQPALGLQANVSSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp ACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCACTCTTGTGGTTGCCACTCTGGGAAATaGCCCGATGGAAGAGACCCG +
Preference number: 2 (lower is better)
Translates to: THPKSHLLLLELHAHSCGCHSGK*PDGRDP
Trigger: CGGGTCTCTTCCATCGGGCCATTTCCCAGAGTGGCA...ACCACAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CCA 90 bp ATCTCTTCCGGGTCTCTCTGGAAGTTCAGTTGGAGGAATCTCATCTTGTTGGACTTGCATCCAGCCAGGTaGGCAACCTTCTTGGCCACT +
Preference number: 2 (lower is better)
Translates to: ISSGSLWKFSWRNLILLDLHPAR*ATFLAT
Trigger: AGTGGCCAAGAAGGTTGCCCACCTGGCTGGATGCAA...GTCCAACAAGATGAGATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR CAA 90 bp AAGTTCAGTTGGAGGAATCTCATCTTGTTGGACACACGCATCACCTaGGTCCCTGATAGTGCCCTCAGGCAGTTTACCAGGATCTGTGTG +
Preference number: 2 (lower is better)
Translates to: KFSWRNLILLDTRIT*VPDSALRQFTRICV
Trigger: CACACAGATCCTGGTAAACTGCCTGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCAACTGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR GCA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTAAACTACCAAAAGTTTaGTCCATGTCACAACCTGCC +
Preference number: 2 (lower is better)
Translates to: CQAGKGSAGPTQQAKALAKLPKV*SMSQPA
Trigger: GGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAAGTAGAGGGGCATCATaGGATGTCAGGCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: GREDPKLPKVCSMSQPALSRGAS*DVRLER
Trigger: CCTTTCCAGCCTGACATCCCATGATGCCCCTCTACT...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TGCCCTCAGGCAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCAGCCAGCTTGGCCACTTTCAGTaGGTTACTAGTGATGAAAAG +
Preference number: 2 (lower is better)
Translates to: CPQAVYQDLCAVVVASSQLGHFQ*VTSDEK
Trigger: CTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAG...CTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCTGAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR TCA 90 bp TGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTACTGGATGTCAACAGTaGAGTAGAGGGGCATCATGG +
Preference number: 2 (lower is better)
Translates to: WERRSQTTKSLLHVTTCPTGCQQ*SRGASW
Trigger: CCATGATGCCCCTCTACTTCACTGTTGACATCCAGT...AGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR TCA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTACTGGATGTCAACAGTaGAGTAGAGGGGCATCATGG +
Preference number: 2 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPTGCQQ*SRGASW
Trigger: CCATGATGCCCCTCTACTTCACTGTTGACATCCAGT...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR TCA 90 bp GAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCGTCACAAGGAGACATTaGAGGGTGGGAGGATTTGAA +
Preference number: 2 (lower is better)
Translates to: EDPKLPKVCSMSQPALGLVTRRH*RVGGFE
Trigger: TTCAAATCCTCCCACCCTTCAATGTCTCCTTGTGAC...GAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR GCA 90 bp TGGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACGGTTTCGTAGCATCAGGAAGCCGAAGATaGCGAGCCTGTGCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: WHTRKWHLELCPSYGFVASGSRR*RACAAE
Trigger: TTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGA...TGCTACGAAACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR-3UTR TCA 90 bp ACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCACTCTTGTGGTACTGGATGTCAACAGTaGAGTAGAGGGGCATCATGG +
Preference number: 2 (lower is better)
Translates to: THPKSHLLLLELHAHSCGTGCQQ*SRGASW
Trigger: CCATGATGCCCCTCTACTTCACTGTTGACATCCAGT...ACCACAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR TCA 90 bp CAGTCTGCAGTGTGGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACACTGGATGTCAACAGTaGAGTAGAGGGGCATCATGG +
Preference number: 2 (lower is better)
Translates to: QSAVWHTRKWHLELCPSYTGCQQ*SRGASW
Trigger: CCATGATGCCCCTCTACTTCACTGTTGACATCCAGT...GTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR TCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAAGACAGGCACAAGGTTaGGCAGGATGGATGGTAAAT +
Preference number: 2 (lower is better)
Translates to: GREDPKLPKVCSMSQPALRQAQG*AGWMVN
Trigger: ATTTACCATCCATCCTGCTCAACCTTGTGCCTGTCT...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR TCA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATACGAAAGTGGCATCTTaGACTATGTCCATCATACGG +
Preference number: 2 (lower is better)
Translates to: KLPKVCSMSQPALGLQANTKVAS*TMSIIR
Trigger: CCGTATGATGGACATAGTTCAAGATGCCACTTTCGT...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR GCA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTAAACTACCAAAAGTTTaGTCCATGTCACAACCTGCC +
Preference number: 2 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCKLPKV*SMSQPA
Trigger: GGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPSSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTGCTCTAGCTTTGGCCTaGAGGCAGCAGGGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: FRSNQHFFIEETTPVYRLALALA*RQQGAP
Trigger: AGGAGCTCCCTGCTGCCTCCAGGCCAAAGCTAGAGC...AAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
3UTR-3UTR GCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTATCTTTGGCTCCTTCCTaGATAGCCACCCTTAGAATT +
Preference number: 2 (lower is better)
Translates to: GREDPKLPKVCSMSQPALSLAPS*IATLRI
Trigger: AATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGA...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000567587.6
3UTR-3UTR CCA 90 bp TCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTAGTAGAGGGGCATCATaGGATGTCAGGCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: SGLINTSLLKRPPLCIDFSRGAS*DVRLER
Trigger: CCTTTCCAGCCTGACATCCCATGATGCCCCTCTACT...AAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGTGTTGACAGGGCCTaGCCTAACTGGATGTCAACA +
Preference number: 2 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSGVDRA*PNWMST
Trigger: TGTTGACATCCAGTTAGGCCAGGCCCTGTCAACACC...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGTGGGCAACCTTCTTaGCCACTTTCAGTGGGTTAC +
Preference number: 2 (lower is better)
Translates to: SGLINTSLLKRPPLCIDFGGQPS*PLSVGY
Trigger: GTAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACC...AAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR-3UTR TCA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTACTGGATGTCAACAGTaGAGTAGAGGGGCATCATGG +
Preference number: 2 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSTGCQQ*SRGASW
Trigger: CCATGATGCCCCTCTACTTCACTGTTGACATCCAGT...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CCA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSSSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR GCA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTTCTTTGGCTCCTTCCTaGATAGCCACCCTTAGAATT +
Preference number: 2 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSSLAPS*IATLRI
Trigger: AATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGA...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000567587.6
3UTR-3UTR GCA 90 bp TTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTAAACTACCAAAAGTTTaGTCCATGTCACAACCTGCC +
Preference number: 2 (lower is better)
Translates to: FRSNQHFFIEETTPVYRLKLPKV*SMSQPA
Trigger: GGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT...AAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
3UTR GCA 72 bp TCGTCCGTGCTCAGGAAGCCGAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACCACTTTCTCGCGGGCG +
Preference number: 3 (lower is better)
Translates to: SSVLRKPKMPSL*CRNTSTTFSRA
Trigger: CGCCCGCGAGAAAGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGCACGGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR CCA 72 bp ATCATCAGTCCTGAGATGCTCATGGCCCCCGCCGACTaGCCGAACAGGGTCACATTTCCTGGGTCTCCCCCG +
Preference number: 3 (lower is better)
Translates to: IISPEMLMAPAD*PNRVTFPGSPP
Trigger: CGGGGGAGACCCAGGAAATGTGACCCTGTTCGGCCAGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR-3UTR CAA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGGGGCAAACCCCTCTTaGGCTCCTTCCTGCATAGCC +
Preference number: 3 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEAGANPS*APSCIA
Trigger: GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR CCA 72 bp AGGCTAGGGGTGACATCATCAGTCCTGAGATGCTCATaGCCCCCGCCGACTGGCCGAACAGGGTCACATTTC +
Preference number: 3 (lower is better)
Translates to: RLGVTSSVLRCS*PPPTGRTGSHF
Trigger: GAAATGTGACCCTGTTCGGCCAGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGATGTCACCCCTAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR-3UTR CAA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCGGGGCAAACCCCTCTTaGGCTCCTTCCTGCATAGCC +
Preference number: 3 (lower is better)
Translates to: KLGWVELLSPGMSMASLPGANPS*APSCIA
Trigger: GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR GCA 72 bp AGGTTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTaGAGTGACAGGGGCAGTGGCAGTCTGGGTCGACCT +
Preference number: 3 (lower is better)
Translates to: RLSRMDGKCQAG*SDRGSGSLGRP
Trigger: AGGTCGACCCAGACTGCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR CCA 72 bp AACCTTCCCCTGGGTCAGGAGCACCAAAGGGTCATCTaGGATCACCACACCATCCACCACAGGGCTCATGGA +
Preference number: 3 (lower is better)
Translates to: NLPLGQEHQRVI*DHHTIHHRAHG
Trigger: TCCATGAGCCCTGTGGTGGATGGTGTGGTGATCCCAGATGACCCTTTGGTGCTCCTGACCCAGGGGAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CAA 90 bp GTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGAGCACAGTGTGGTGTaGACAGGGCCTGGCCTAACT +
Preference number: 3 (lower is better)
Translates to: VCSMSQPALGLQANVNRQEHSVV*TGPGLT
Trigger: AGTTAGGCCAGGCCCTGTCAACACCACACTGTGCTC...CTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR CCA 72 bp GAGGCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCT +
Preference number: 3 (lower is better)
Translates to: EAAGSSCSSKLG*VELLSPGMSMA
Trigger: AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCGGGTGGGTAGAACTCTaGTCCCCAGGTATGTCCATG +
Preference number: 3 (lower is better)
Translates to: KLGWVELLSPGMSMASLPGWVEL*SPGMSM
Trigger: CATGGACATACCTGGGGACAAGAGTTCTACCCACCC...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGGAGCACAGTGTGGTGTaGACAGGGCCTGGCCTAACT +
Preference number: 3 (lower is better)
Translates to: LPKVCSMSQPALGLQANVEHSVV*TGPGLT
Trigger: AGTTAGGCCAGGCCCTGTCAACACCACACTGTGCTC...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR GCA 72 bp TGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTaGATAGCCACCCTTAGAATTGCCTCTGCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: WMVGANPSLAPS*IATLRIASASQ
Trigger: CTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
3UTR GCA 72 bp CTGATAGTGCCCTCAGGCAGTTTACCAGGATCTGTGTaGTGTTGTGGTTGCATCCAGCCAGGTGGGCAACCT +
Preference number: 3 (lower is better)
Translates to: LIVPSGSLPGSV*CCGCIQPGGQP
Trigger: AGGTTGCCCACCTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCTGAGGGCACTATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CAA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCCAGACAGGCACAAGGTaGAGCAGGATGGATGGTAAA +
Preference number: 3 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGQTGTR*SRMDGK
Trigger: TTTACCATCCATCCTGCTCAACCTTGTGCCTGTCTG...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCCAGACAGGCACAAGGTaGAGCAGGATGGATGGTAAA +
Preference number: 3 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGQTGTR*SRMDGK
Trigger: TTTACCATCCATCCTGCTCAACCTTGTGCCTGTCTG...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp GAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGCAGACAGGCACAAGGTaGAGCAGGATGGATGGTAAA +
Preference number: 3 (lower is better)
Translates to: ETTPVYRLWSGPGGDKCGQTGTR*SRMDGK
Trigger: TTTACCATCCATCCTGCTCAACCTTGTGCCTGTCTG...CCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTGGCAGATTCCCATCATaGGGGTTTCTCGGTGGTAGT +
Preference number: 3 (lower is better)
Translates to: CQAGKGSAGPTQQAKALAGRFPS*GFLGGS
Trigger: ACTACCACCGAGAAACCCCAATGATGGGAATCTGCC...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR CCA 72 bp GGCCGGCATCTCGGTGGTAGTGAGCAGTCTGCAGTGTaGCATACACGAAAGTGGCATCTTGAACTATGTCCA +
Preference number: 3 (lower is better)
Translates to: GRHLGGSEQSAV*HTRKWHLELCP
Trigger: TGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGATGCCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR-3UTR CAA 90 bp TTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAGCAAAAGCTCTAGCTTaGGCCTGGAGGCAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: LLKRPPLCIDFGVALGEIAKALA*AWRQQG
Trigger: TCCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGC...TATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp TTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAGAGCACAGTGTGGTGTaGACAGGGCCTGGCCTAACT +
Preference number: 3 (lower is better)
Translates to: LLKRPPLCIDFGVALGEIEHSVV*TGPGLT
Trigger: AGTTAGGCCAGGCCCTGTCAACACCACACTGTGCTC...TATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp TCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCACAATGGAGGAATCTCATCTaGTTGGACACACGCATCACC +
Preference number: 3 (lower is better)
Translates to: SMSQPALGLQANVNRQAQWRNLI*LDTRIT
Trigger: GGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCA...TTGTGCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CAA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGTGGTACCTGCTCCTaGGTGATATTCAACAGGGTG +
Preference number: 3 (lower is better)
Translates to: KLGWVELLSPGMSMASLPSGTCS*VIFNRV
Trigger: CACCCTGTTGAATATCACCAAGGAGCAGGTACCACT...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR GCA 72 bp ACATTGTCCAGGTACTCCTCCACCACAAGTGGTACCTaGTCCTTGGTGATATTCAACAGGGTGCGGGTACTC +
Preference number: 3 (lower is better)
Translates to: TLSRYSSTTSGT*SLVIFNRVRVL
Trigger: GAGTACCCGCACCCTGTTGAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCTGGACAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR CCA 72 bp GGAGGAATCTCATCTTGTTGGACACACGCATCACCTTaGTCCCTGATAGTGCCCTCAGGCAGTTTACCAGGA +
Preference number: 3 (lower is better)
Translates to: GGISSCWTHASP*SLIVPSGSLPG
Trigger: TCCTGGTAAACTGCCTGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CAA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGGGTGGGTAGAACTCTaGTCCCCAGGTATGTCCATG +
Preference number: 3 (lower is better)
Translates to: KLPKVCSMSQPALGLQANGWVEL*SPGMSM
Trigger: CATGGACATACCTGGGGACAAGAGTTCTACCCACCC...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTCAGACAGGCACAAGGTaGAGCAGGATGGATGGTAAA +
Preference number: 3 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCQTGTR*SRMDGK
Trigger: TTTACCATCCATCCTGCTCAACCTTGTGCCTGTCTG...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATAGGTGGGCAACCTTCTaGGCCACTTTCAGTGGGTTA +
Preference number: 3 (lower is better)
Translates to: KLPKVCSMSQPALGLQANRWATF*ATFSGL
Trigger: TAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACCT...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CAA 90 bp TCCAGGTACTCCTCCACCACAAGTGGTACCTGCTCCTTGGTGATATTCAACAGGTGGAGGAATCTCATCTaGTTGGACACACGCATCACC +
Preference number: 3 (lower is better)
Translates to: SRYSSTTSGTCSLVIFNRWRNLI*LDTRIT
Trigger: GGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCA...CCTGTTGAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR CCA 72 bp TTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTaGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: FFIEETTPVYRL*SGPGGDKCGWE
Trigger: CTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR CCA 72 bp CTCATTGACATTGTCCAGGTACTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGATATTCAACAGGGTGCG +
Preference number: 3 (lower is better)
Translates to: LIDIVQVLLHHK*YLLLGDIQQGA
Trigger: CGCACCCTGTTGAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCTGGACAATGTCAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR-3UTR CAA 90 bp TCCAGGTACTCCTCCACCACAAGTGGTACCTGCTCCTTGGTGATATTCAACAGGCTGCTTCTCAGGTCTTaGAGACTGGTACAGACTCAT +
Preference number: 3 (lower is better)
Translates to: SRYSSTTSGTCSLVIFNRLLLRS*RLVQTH
Trigger: ATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAG...CCTGTTGAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCTGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR-3UTR CAA 90 bp ATATTCAACAGGGTGCGGGTACTCCAGAGCATCTTAGTGATGGTTTCCTTTCTCGGGTGGGTAGAACTCTaGTCCCCAGGTATGTCCATG +
Preference number: 3 (lower is better)
Translates to: IFNRVRVLQSILVMVSFLGWVEL*SPGMSM
Trigger: CATGGACATACCTGGGGACAAGAGTTCTACCCACCC...GAGAAAGGAAACCATCACTAAGATGCTCTGGAGTACCCGCACCCTGTTGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR-3UTR CAA 90 bp ACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCACTCTTGTGGTGGGTGGGTAGAACTCTaGTCCCCAGGTATGTCCATG +
Preference number: 3 (lower is better)
Translates to: THPKSHLLLLELHAHSCGGWVEL*SPGMSM
Trigger: CATGGACATACCTGGGGACAAGAGTTCTACCCACCC...ACCACAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CAA 90 bp TGGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACGGTTTCGTAGCAGCAAAAGCTCTAGCTTaGGCCTGGAGGCAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: WHTRKWHLELCPSYGFVAAKALA*AWRQQG
Trigger: TCCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGC...TGCTACGAAACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CAA 90 bp TTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATACAGACAGGCACAAGGTaGAGCAGGATGGATGGTAAA +
Preference number: 3 (lower is better)
Translates to: LLKRPPLCIDFGVALGEIQTGTR*SRMDGK
Trigger: TTTACCATCCATCCTGCTCAACCTTGTGCCTGTCTG...TATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp GTCAACAGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTGGAAAGGGCAGTGCATCAACACTTCTTTATaGAAGAGACCACCCCTGTGT +
Preference number: 3 (lower is better)
Translates to: VNSEVEGHHGMSGWKGQCINTSL*KRPPLC
Trigger: ACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGAT...GCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp AGTGCGGGGTTTGACGATTATTCCACGAGCGTGGTGCTCAAATTCATACAGGTAAGGTGGGCAACCTTCTaGGCCACTTTCAGTGGGTTA +
Preference number: 3 (lower is better)
Translates to: SAGFDDYSTSVVLKFIQVRWATF*ATFSGL
Trigger: TAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACCT...TACCTGTATGAATTTGAGCACCACGCTCGTGGAATAATCGTCAAACCCCGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
3UTR CCA 72 bp GGGCTCATGGACCAGATAATCTCTTCCGGGTCTCTCTaGAAGTTCAGTTGGAGGAATCTCATCTTGTTGGAC +
Preference number: 3 (lower is better)
Translates to: GLMDQIISSGSL*KFSWRNLILLD
Trigger: GTCCAACAAGATGAGATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGAGATTATCTGGTCCATGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR CCA 72 bp TTGGGGTTTCTCGGTGGTAGTGAGCAGTCTGCAGTGTaGCATACACGAAAGTGGCATCTTGAACTATGTCCA +
Preference number: 3 (lower is better)
Translates to: LGFLGGSEQSAV*HTRKWHLELCP
Trigger: TGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGAAACCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR-3UTR CAA 90 bp GGAAGTTCAGTTGGAGGAATCTCATCTTGTTGGACACACGCATCACCTTGGTCCCTGCTTCTCAGGTCTTaGAGACTGGTACAGACTCAT +
Preference number: 3 (lower is better)
Translates to: GSSVGGISSCWTHASPWSLLLRS*RLVQTH
Trigger: ATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAG...GGACCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCAACTGAACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CAA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTCAAACTACCAAAAGTTaGCTCCATGTCACAACCTGC +
Preference number: 3 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCQTTKS*LHVTTC
Trigger: GCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTG...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp TTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATACAAACTACCAAAAGTTaGCTCCATGTCACAACCTGC +
Preference number: 3 (lower is better)
Translates to: LLKRPPLCIDFGVALGEIQTTKS*LHVTTC
Trigger: GCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTG...TATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp GAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGAGGAATCTCATCTTGTaGGACACACGCATCACCTTG +
Preference number: 3 (lower is better)
Translates to: ERRSQTTKSLLHVTTCPRRNLIL*DTRITL
Trigger: CAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCT...CCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR-3UTR CAA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGCAAAAGCTCTAGCTTaGGCCTGGAGGCAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSAKALA*AWRQQG
Trigger: TCCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGC...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp TGGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACGGTTTCGTAGCACAGACAGGCACAAGGTaGAGCAGGATGGATGGTAAA +
Preference number: 3 (lower is better)
Translates to: WHTRKWHLELCPSYGFVAQTGTR*SRMDGK
Trigger: TTTACCATCCATCCTGCTCAACCTTGTGCCTGTCTG...TGCTACGAAACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR TCA 72 bp GCAGTCTGCAGTGTGGCATACACGAAAGTGGCATCTTaGACTATGTCCATCATACGGTTTCGTAGCATCTTC +
Preference number: 3 (lower is better)
Translates to: AVCSVAYTKVAS*TMSIIRFRSIF
Trigger: GAAGATGCTACGAAACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR GCA 72 bp ATGTCCATCATACGGTTTCGTAGCATCTTCCAGTCATaGTCATTGACATTGTCCAGGTACTCCTCCACCACA +
Preference number: 3 (lower is better)
Translates to: MSIIRFRSIFQS*SLTLSRYSSTT
Trigger: TGTGGTGGAGGAGTACCTGGACAATGTCAATGAGCATGACTGGAAGATGCTACGAAACCGTATGATGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR CCA 72 bp GGTAGTGAGCAGTCTGCAGTGTGGCATACACGAAAGTaGCATCTTGAACTATGTCCATCATACGGTTTCGTA +
Preference number: 3 (lower is better)
Translates to: GSEQSAVWHTRK*HLELCPSYGFV
Trigger: TACGAAACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
3UTR CCA 72 bp CTCATTGACATTGTCCAGGTACTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGATATTATAAGGCAAGAG +
Preference number: 3 (lower is better)
Translates to: LIDIVQVLLHHK*YLLLGDIIRQE
Trigger: CTCTTGCCTTATAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCTGGACAATGTCAATGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR-3UTR CAA 90 bp TCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGGTGGGTAGAACTCTaGTCCCCAGGTATGTCCATG +
Preference number: 3 (lower is better)
Translates to: SGLINTSLLKRPPLCIDFGWVEL*SPGMSM
Trigger: CATGGACATACCTGGGGACAAGAGTTCTACCCACCC...AAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp AGAAATTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGCAAAAGCTCTAGCTTaGGCCTGGAGGCAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: RNSGLINTSLLKRPPLCIAKALA*AWRQQG
Trigger: TCCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGC...TATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000648724.2
3UTR-3UTR CAA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTCTGCTTCTCAGGTCTTaGAGACTGGTACAGACTCAT +
Preference number: 3 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSLLLRS*RLVQTH
Trigger: ATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAG...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000567587.6
3UTR-3UTR CAA 90 bp TTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTATCAACACTTCTTTATaGAAGAGACCACCCCTGTGT +
Preference number: 3 (lower is better)
Translates to: FRSNQHFFIEETTPVYRLINTSL*KRPPLC
Trigger: ACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGAT...AAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCACCATCACTGGCAGCTaGGGATCCCCGGGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPTITGS*GSPGAR
Trigger: GCGCGCGCCCGGGGATCCCCAGCTGCCAGTGATGGT...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCACTCCTGCAGGCACCTaGGGGCACCAGGTAGCGGCG +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPTPAGT*GHQVAA
Trigger: CGCCGCTACCTGGTGCCCGCAGGTGCCTGCAGGAGT...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540579.6
CDS-3UTR GCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCTGGCCCCAGGACTCCTaGAGGCACCTGCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPWPQDS*RHLRAP
Trigger: TGGTGCCCGCAGGTGCCTGCAGGAGTCCTGGGGCCA...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540579.6
CDS-3UTR CCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCAGTTCCCGCGCGCGTaGCTGTCGTCCGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATQFPRA*LSSVLR
Trigger: CCTGAGCACGGACGACAGCCACGCGCGCGGGAACTG...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCGTCCTGAGATGCTCATaGCCCCCGCCGACTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPVLRCS*PPPTGR
Trigger: TCGGCCAGTCGGCGGGGGCCATGAGCATCTCAGGAC...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGCAGTTCCCGCGCGCGTaGCTGTCGTCCGTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: NSCPQVCPWLVSPGPGWWQFPRA*LSSVRP
Trigger: GGGCCGCACGGACGACAGCCACGCGCGCGGGAACTG...CCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535696.1
CDS-3UTR CCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCCCAGGGCCTGGATGGTaGGGGCAAACCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAPGPGW*GQTPLW
Trigger: CCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGG...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCGAACCAGACCATCACTaGCAGCTGGGGATCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAEPDHH*QLGIPG
Trigger: CCCGGGGATCCCCAGCTGCCAGTGATGGTCTGGTTC...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGATGCTCATGGCCCCCGCCGACTGGCCGAACAGGGTCACATTTCCTGGGTCTCGTCCTGAGATGCTCATaGCCCCCGCCGACTGGCCGA +
Preference number: 4 (lower is better)
Translates to: RCSWPPPTGRTGSHFLGLVLRCS*PPPTGR
Trigger: TCGGCCAGTCGGCGGGGGCCATGAGCATCTCAGGAC...GAGACCCAGGAAATGTGACCCTGTTCGGCCAGTCGGCGGGGGCCATGAGCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS-3UTR TCA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGAAGCAGCGCCCACGATaGAGGCGCCTCCCGGGAACC +
Preference number: 4 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGKQRPR*RRLPGT
Trigger: GGTTCCCGGGAGGCGCCTTCATCGTGGGCGCTGCTT...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGC +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAGWKGQ*RSHTTG
Trigger: GCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCACCATCACTGGCAGCTaGGGATCCCCGGGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGTITGS*GSPGAR
Trigger: GCGCGCGCCCGGGGATCCCCAGCTGCCAGTGATGGT...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCCAGGGTCACATTTCCTaGGTCTCCCCCGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAQGHIS*VSPEGC
Trigger: GCAGCCTTCGGGGGAGACCCAGGAAATGTGACCCTG...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCGAGGCTAGGGGTGACATCATCAGTCCTGAGATGCTCATGGCCCCCGCCGACATGGCCCCCGCCGACTaGCCGAACAGGGTCACATTT +
Preference number: 4 (lower is better)
Translates to: PEARGDIISPEMLMAPADMAPAD*PNRVTF
Trigger: AAATGTGACCCTGTTCGGCCAGTCGGCGGGGGCCAT...GTCGGCGGGGGCCATGAGCATCTCAGGACTGATGATGTCACCCCTAGCCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR TCA 90 bp GGCACAGATGAAACCTTCCCCTGGGTCAGGAGCACCAAAGGGTCATCTGGGATCAAGCAGCGCCCACGATaGAGGCGCCTCCCGGGAACC +
Preference number: 4 (lower is better)
Translates to: GTDETFPWVRSTKGSSGIKQRPR*RRLPGT
Trigger: GGTTCCCGGGAGGCGCCTTCATCGTGGGCGCTGCTT...GATCCCAGATGACCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR TCA 90 bp GGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCAAGCAGCGCCCACGATaGAGGCGCCTCCCGGGAACC +
Preference number: 4 (lower is better)
Translates to: GWKGQCRSHTTGKSSSFGKQRPR*RRLPGT
Trigger: GGTTCCCGGGAGGCGCCTTCATCGTGGGCGCTGCTT...GCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTACCATCACTGGCAGCTaGGGATCCCCGGGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: GANPSLAPSCIATLRIASTITGS*GSPGAR
Trigger: GCGCGCGCCCGGGGATCCCCAGCTGCCAGTGATGGT...AGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
CDS-3UTR CCA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTACCATCACTGGCAGCTaGGGATCCCCGGGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: CQAGKGSAGPTQQAKALATITGS*GSPGAR
Trigger: GCGCGCGCCCGGGGATCCCCAGCTGCCAGTGATGGT...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCCAGTTCCCGCGCGCGTaGCTGTCGTCCGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGQFPRA*LSSVLR
Trigger: CCTGAGCACGGACGACAGCCACGCGCGCGGGAACTG...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGTCCTGAGATGCTCATaGCCCCCGCCGACTGGCCGA +
Preference number: 4 (lower is better)
Translates to: NSCPQVCPWLVSPGPGWWVLRCS*PPPTGR
Trigger: TCGGCCAGTCGGCGGGGGCCATGAGCATCTCAGGAC...CCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGACCGTTCCCGCGTGCTaGCGTACATCGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: NSCPQVCPWLVSPGPGWWTVPAC*RTSRPA
Trigger: AGCTGGCCTCGATGTACGTCAGCACGCGGGAACGGT...CCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGAAGCAGCGCCCACGATaGAGGCGCCTCCCGGGAACC +
Preference number: 4 (lower is better)
Translates to: VCSMSQPALGLQANVNRQKQRPR*RRLPGT
Trigger: GGTTCCCGGGAGGCGCCTTCATCGTGGGCGCTGCTT...CTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp CCTCAGGCAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCAGCCAGGTGAAGCAGCGCCCACGATaGAGGCGCCTCCCGGGAACC +
Preference number: 4 (lower is better)
Translates to: PQAVYQDLCAVVVASSQVKQRPR*RRLPGT
Trigger: GGTTCCCGGGAGGCGCCTTCATCGTGGGCGCTGCTT...CACCTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR TCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCAAGGTAGGGCACAGATaGAACCTTCCCCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPKVGHR*NLPLGQ
Trigger: CTGACCCAGGGGAAGGTTTCATCTGTGCCCTACCTT...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTCATCCCCATGGTCTaGCCCATCAGTGCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATLIPMV*PISAGF
Trigger: AAACCCCGCACTGATGGGGCAGACCATGGGGATGAG...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TGCCCTCAGGCAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCAGCCAGACTCCTGCAGGCACCTaGGGGCACCAGGTAGCGGCG +
Preference number: 4 (lower is better)
Translates to: CPQAVYQDLCAVVVASSQTPAGT*GHQVAA
Trigger: CGCCGCTACCTGGTGCCCGCAGGTGCCTGCAGGAGT...CTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCTGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR GCA 90 bp CCCGAGGCTAGGGGTGACATCATCAGTCCTGAGATGCTCATGGCCCCCGCCGACAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACC +
Preference number: 4 (lower is better)
Translates to: PEARGDIISPEMLMAPADKMPSL*CRNTST
Trigger: GGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTT...GTCGGCGGGGGCCATGAGCATCTCAGGACTGATGATGTCACCCCTAGCCTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR GCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACC +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAKMPSL*CRNTST
Trigger: GGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTT...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACC +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPKMPSL*CRNTST
Trigger: GGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTT...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCTCAGGAAGCCGAAGATaGCGAGCCTGTGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPSGSRR*RACAAE
Trigger: TTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGA...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCTCAGGAAGCCGAAGATaGCGAGCCTGTGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIASGSRR*RACAAE
Trigger: TTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGA...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCGCACCCAAGGCCGTCTaGGCCATCAGGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGAPKAV*AIRQRV
Trigger: CACCCTCTGCCTGATGGCGCAGACGGCCTTGGGTGC...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGCCAGGGCCTGGATGGTaGGGGCAAACCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: ELLSPGMSMASLPRAWMVPGPGW*GQTPLW
Trigger: CCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGG...CACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCACCAGGGCCTGGATGGTaGGGGCAAACCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEAPGPGW*GQTPLW
Trigger: CCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGG...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CAGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACTACATCGAGGCCAGCTaGCCCCAGGACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGQWQSGSTSHKKESQGDYIEAS*PQDSCR
Trigger: CCTGCAGGAGTCCTGGGGCCAGCTGGCCTCGATGTA...GTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGAACCAGACCATCACTaGCAGCTGGGGATCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ELLSPGMSMASLPRAWMVEPDHH*QLGIPG
Trigger: CCCGGGGATCCCCAGCTGCCAGTGATGGTCTGGTTC...CACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCTGGGAAATGGCCCGATaGAAGAGACCCGAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATWEMAR*KRPEAR
Trigger: CCTAGCCTCGGGTCTCTTCCATCGGGCCATTTCCCA...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CGCGTGGCTGTCGTCCGTGCTCAGGAAGCCGAAGATGCCGAGCCTGTGCTGCAGGGTGGGCAACCTTCTTaGCCACTTTCAGTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: RVAVVRAQEAEDAEPVLQGGQPS*PLSVGY
Trigger: GTAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACC...CTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGCACGGACGACAGCCACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS-3UTR CCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCTTGCATCCAGCCAGGTaGGCAACCTTCTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIALHPAR*ATFLAT
Trigger: AGTGGCCAAGAAGGTTGCCCACCTGGCTGGATGCAA...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCGATGAAACCTTCCCCTaGGTCAGGAGCACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIADETFP*VRSTKG
Trigger: CCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATC...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCCCTGCCAGCAAGTACTaGGGCGGGAGGAATTGTAAC +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAPASKY*GGRNCN
Trigger: GTTACAATTCCTCCCGCCCCAGTACTTGCTGGCAGG...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCGCCTCCAGGCCAATGTaGACAGACAGGCACAAGGTT +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATASRPM*TDRHKV
Trigger: AACCTTGTGCCTGTCTGTTCACATTGGCCTGGAGGC...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TCCGTGCTCAGGAAGCCGAAGATGCCGAGCCTGTGCTGCAGAAACACCAGCACCGCAGCAGGGAGCTCCTaGAGTTCTAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SVLRKPKMPSLCCRNTSTAAGSS*SSKLGW
Trigger: CCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC...GGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS-3UTR GCA 90 bp GGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTCGCTCTGGCCACAGCTaGGGTCCCAAAGGGTACCGG +
Preference number: 4 (lower is better)
Translates to: GANPSLAPSCIATLRIASRSGHS*GPKGYR
Trigger: CCGGTACCCTTTGGGACCGCAGCTGTGGCCAGAGCG...AGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR GCA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTGCACCCAAGGCCGTCTaGGCCATCAGGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: CQAGKGSAGPTQQAKALAAPKAV*AIRQRV
Trigger: CACCCTCTGCCTGATGGCGCAGACGGCCTTGGGTGC...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGGCTCTAGCTTTGGCCTaGAGGCAGCAGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGALALA*RQQGAP
Trigger: AGGAGCTCCCTGCTGCCTCCAGGCCAAAGCTAGAGC...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCGGTGTTGACAGGGCCTaGCCTAACTGGATGTCAACA +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPGVDRA*PNWMST
Trigger: TGTTGACATCCAGTTAGGCCAGGCCCTGTCAACACC...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCCCTGTGTATAGACTTTaGAGTGGCCCTGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPPVYRL*SGPGGD
Trigger: ATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGG...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCTACATCGAGGCCAGCTaGCCCCAGGACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGYIEAS*PQDSCR
Trigger: CCTGCAGGAGTCCTGGGGCCAGCTGGCCTCGATGTA...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCGAACCAGACCATCACTaGCAGCTGGGGATCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGEPDHH*QLGIPG
Trigger: CCCGGGGATCCCCAGCTGCCAGTGATGGTCTGGTTC...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGCAGGGTCACATTTCCTaGGTCTCCCCCGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: NSCPQVCPWLVSPGPGWWQGHIS*VSPEGC
Trigger: GCAGCCTTCGGGGGAGACCCAGGAAATGTGACCCTG...CCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GTTGTAGCGTGGCCAGCAGGGCAGATTCCCATCATTGGGGTTTCCTGTGCGGGCTGCCACTCTGGGAAATaGCCCGATGGAAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: VVAWPAGQIPIIGVSCAGCHSGK*PDGRDP
Trigger: CGGGTCTCTTCCATCGGGCCATTTCCCAGAGTGGCA...GCCCGCACAGGAAACCCCAATGATGGGAATCTGCCCTGCTGGCCACGCTACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR CCA 90 bp CCGTGCTCAGGAAGCCGAAGATGCCGAGCCTGTGCTGCAGAAACACCAGCACCATGCCACTCTGGGAAATaGCCCGATGGAAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: PCSGSRRCRACAAETPAPCHSGK*PDGRDP
Trigger: CGGGTCTCTTCCATCGGGCCATTTCCCAGAGTGGCA...TGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS-3UTR CCA 90 bp CCCGAGGCTAGGGGTGACATCATCAGTCCTGAGATGCTCATGGCCCCCGCCGACGGTGGGCAACCTTCTTaGCCACTTTCAGTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: PEARGDIISPEMLMAPADGGQPS*PLSVGY
Trigger: GTAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACC...GTCGGCGGGGGCCATGAGCATCTCAGGACTGATGATGTCACCCCTAGCCTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCATCTGTGTGCTGTTGTaGTTGCATCCAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPICVLL*LHPARW
Trigger: CCACCTGGCTGGATGCAACCACAACAGCACACAGAT...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCCACCAAAGGGTCATCTaGGATCACCACACCATCCAC +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAHQRVI*DHHTIH
Trigger: GTGGATGGTGTGGTGATCCCAGATGACCCTTTGGTG...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACTGGATGTCAACAGTaGAGTAGAGGGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIATGCQQ*SRGASW
Trigger: CCATGATGCCCCTCTACTTCACTGTTGACATCCAGT...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGATCCAGGGTCCGCAGTaGGAAGACGGAACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGIQGPQ*EDGTQS
Trigger: GCTTTGGGTTCCGTCTTCTCACTGCGGACCCTGGAT...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000540579.6
CDS-3UTR TCA 90 bp TCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCAAGCAGCGCCCACGATaGAGGCGCCTCCCGGGAACC +
Preference number: 4 (lower is better)
Translates to: SKLGWVELLSPGMSMASLKQRPR*RRLPGT
Trigger: GGTTCCCGGGAGGCGCCTTCATCGTGGGCGCTGCTT...GAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGC +
Preference number: 4 (lower is better)
Translates to: ETTPVYRLWSGPGGDKCGGWKGQ*RSHTTG
Trigger: GCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC...CCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTACTCCTGCAGGCACCTaGGGGCACCAGGTAGCGGCG +
Preference number: 4 (lower is better)
Translates to: NPSLAPSCIATLRIASASTPAGT*GHQVAA
Trigger: CGCCGCTACCTGGTGCCCGCAGGTGCCTGCAGGAGT...AGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000535696.1
CDS-3UTR GCA 90 bp TCCAGGTACTCCTCCACCACAAGTGGTACCTGCTCCTTGGTGATATTCAACAGGTGGCCCCAGGACTCCTaGAGGCACCTGCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: SRYSSTTSGTCSLVIFNRWPQDS*RHLRAP
Trigger: TGGTGCCCGCAGGTGCCTGCAGGAGTCCTGGGGCCA...CCTGTTGAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR CCA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCACCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGACCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PLCIDFGVALGEISVGGRPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGGCTCTAGCTTTGGCCTaGAGGCAGCAGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ETTPVYRLWSGPGGDKCGALALA*RQQGAP
Trigger: AGGAGCTCCCTGCTGCCTCCAGGCCAAAGCTAGAGC...CCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGAGCTCTAGCTTTGGCCTaGAGGCAGCAGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLCIDFGVALGEISVGGRALALA*RQQGAP
Trigger: AGGAGCTCCCTGCTGCCTCCAGGCCAAAGCTAGAGC...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCAGTAGAGGGGCATCATaGGATGTCAGGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATSRGAS*DVRLER
Trigger: CCTTTCCAGCCTGACATCCCATGATGCCCCTCTACT...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCAGCCAGGTGGGCAACCTACATCGAGGCCAGCTaGCCCCAGGACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QFTRICVLLWLHPARWATYIEAS*PQDSCR
Trigger: CCTGCAGGAGTCCTGGGGCCAGCTGGCCTCGATGTA...GGTTGCCCACCTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp TTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTACCATCACTGGCAGCTaGGGATCCCCGGGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: LAPSCIATLRIASASQVFTITGS*GSPGAR
Trigger: GCGCGCGCCCGGGGATCCCCAGCTGCCAGTGATGGT...AAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
CDS-3UTR CCA 90 bp ACTTTTCATCCTTGTTGTAGCGTGGCCAGCAGGGCAGATTCCCATCATTGGGGTCAGTTCCCGCGCGCGTaGCTGTCGTCCGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TFHPCCSVASRADSHHWGQFPRA*LSSVLR
Trigger: CCTGAGCACGGACGACAGCCACGCGCGCGGGAACTG...ACCCCAATGATGGGAATCTGCCCTGCTGGCCACGCTACAACAAGGATGAAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS-3UTR CCA 90 bp GAAATGGCCCGATGGAAGAGACCCGAGGCTAGGGGTGACATCATCAGTCCTGAGCAGGGTCACATTTCCTaGGTCTCCCCCGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EMARWKRPEARGDIISPEQGHIS*VSPEGC
Trigger: GCAGCCTTCGGGGGAGACCCAGGAAATGTGACCCTG...CTCAGGACTGATGATGTCACCCCTAGCCTCGGGTCTCTTCCATCGGGCCATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGACAGGGTCACATTTCCTaGGTCTCCCCCGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PLCIDFGVALGEISVGGRQGHIS*VSPEGC
Trigger: GCAGCCTTCGGGGGAGACCCAGGAAATGTGACCCTG...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCCAGGGTCACATTTCCTaGGTCTCCCCCGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALAQGHIS*VSPEGC
Trigger: GCAGCCTTCGGGGGAGACCCAGGAAATGTGACCCTG...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATGGCCCCCGCCGACTaGCCGAACAGGGTCACATTT +
Preference number: 4 (lower is better)
Translates to: WMVGANPSLAPSCIATLRMAPAD*PNRVTF
Trigger: AAATGTGACCCTGTTCGGCCAGTCGGCGGGGGCCAT...TCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAATGGCCCCCGCCGACTaGCCGAACAGGGTCACATTT +
Preference number: 4 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPMAPAD*PNRVTF
Trigger: AAATGTGACCCTGTTCGGCCAGTCGGCGGGGGCCAT...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGTGGGAAATGGCCCGATaGAAGAGACCCGAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGWEMAR*KRPEAR
Trigger: CCTAGCCTCGGGTCTCTTCCATCGGGCCATTTCCCA...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCATGCCACTCTGGGAAATaGCCCGATGGAAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEACHSGK*PDGRDP
Trigger: CGGGTCTCTTCCATCGGGCCATTTCCCAGAGTGGCA...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCGGTGGGCAACCTTCTTaGCCACTTTCAGTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATGGQPS*PLSVGY
Trigger: GTAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACC...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCATCTGTGTGCTGTTGTaGTTGCATCCAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATICVLL*LHPARW
Trigger: CCACCTGGCTGGATGCAACCACAACAGCACACAGAT...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCACACACGCATCACCTTaGTCCCTGATAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATTHASP*SLIVPS
Trigger: TGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGT...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCGGGCTCCGGGGGTTCTaGAGGTGCAAACCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALAGLRGF*RCKPED
Trigger: ATCCTCAGGTTTGCACCTCCAGAACCCCCGGAGCCC...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGACCGTTCCCGCGTGCTaGCGTACATCGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVTVPAC*RTSRPA
Trigger: AGCTGGCCTCGATGTACGTCAGCACGCGGGAACGGT...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAACAGACAGTCCTCGCTaGAGCGCAGCCACTTGTACC +
Preference number: 4 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPTDSPR*SAATCT
Trigger: GGTACAAGTGGCTGCGCTTCAGCGAGGACTGTCTGT...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGCTGGAGGTGCAAACCTaGGGATACCTAGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: NSCPQVCPWLVSPGPGWWLEVQT*GYLEEV
Trigger: GACCTCCTCTAGGTATCCTCAGGTTTGCACCTCCAG...CCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGGCAGCAGGGAGCTCCTaGAGTTCTAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ETTPVYRLWSGPGGDKCGAAGSS*SSKLGW
Trigger: CCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC...CCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGC +
Preference number: 4 (lower is better)
Translates to: GANPSLAPSCIATLRIASGWKGQ*RSHTTG
Trigger: GCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC...AGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp GAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGATGCCGAGCCTGTGCTaGAGAAACACCAGCACCACT +
Preference number: 4 (lower is better)
Translates to: ELLSPGMSMASLPRAWMVMPSLC*RNTSTT
Trigger: AGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCAT...CACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CCCGAGGCTAGGGGTGACATCATCAGTCCTGAGATGCTCATGGCCCCCGCCGACTTACCAGGATCTGTGTaGTGTTGTGGTTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: PEARGDIISPEMLMAPADLPGSV*CCGCIQ
Trigger: CTGGATGCAACCACAACAGCACACAGATCCTGGTAA...GTCGGCGGGGGCCATGAGCATCTCAGGACTGATGATGTCACCCCTAGCCTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR GCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCTTACCAGGATCTGTGTaGTGTTGTGGTTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPLPGSV*CCGCIQ
Trigger: CTGGATGCAACCACAACAGCACACAGATCCTGGTAA...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCTTACCAGGATCTGTGTaGTGTTGTGGTTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIALPGSV*CCGCIQ
Trigger: CTGGATGCAACCACAACAGCACACAGATCCTGGTAA...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCACATTGGGGTTTCCTGTaGGGGCAAAGTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEAHWGFL*GQSWPS
Trigger: ACTGGGCCAACTTTGCCCGCACAGGAAACCCCAATG...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCTCAGGCAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCAGCCAGGTGCCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PQAVYQDLCAVVVASSQVPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...CACCTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIASSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPSSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCGCAGATTCCCATCATTaGGGTTTCTCGGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATADSHH*GFSVVV
Trigger: CACTACCACCGAGAAACCCCAATGATGGGAATCTGC...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGTACATCGAGGCCAGCTaGCCCCAGGACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVYIEAS*PQDSCR
Trigger: CCTGCAGGAGTCCTGGGGCCAGCTGGCCTCGATGTA...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGACCATCACTGGCAGCTaGGGATCCCCGGGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: ERRSQTTKSLLHVTTCPRTITGS*GSPGAR
Trigger: GCGCGCGCCCGGGGATCCCCAGCTGCCAGTGATGGT...CCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCAGTTCCCGCGCGCGTaGCTGTCGTCCGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SSKLGWVELLSPGMSMASQFPRA*LSSVLR
Trigger: CCTGAGCACGGACGACAGCCACGCGCGCGGGAACTG...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTCAGGGTCACATTTCCTaGGTCTCCCCCGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CQAGKGSAGPTQQAKALAQGHIS*VSPEGC
Trigger: GCAGCCTTCGGGGGAGACCCAGGAAATGTGACCCTG...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGATGGGAAATGGCCCGATaGAAGAGACCCGAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: WMVGANPSLAPSCIATLRWEMAR*KRPEAR
Trigger: CCTAGCCTCGGGTCTCTTCCATCGGGCCATTTCCCA...TCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCTGGGAAATGGCCCGATaGAAGAGACCCGAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGWEMAR*KRPEAR
Trigger: CCTAGCCTCGGGTCTCTTCCATCGGGCCATTTCCCA...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGGAAATGGCCCGATaGAAGAGACCCGAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALAWEMAR*KRPEAR
Trigger: CCTAGCCTCGGGTCTCTTCCATCGGGCCATTTCCCA...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CAGGAAGCCGAAGATGCCGAGCCTGTGCTGCAGAAACACCAGCACCACTTTCTCTGGGAAATGGCCCGATaGAAGAGACCCGAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: QEAEDAEPVLQKHQHHFLWEMAR*KRPEAR
Trigger: CCTAGCCTCGGGTCTCTTCCATCGGGCCATTTCCCA...GAGAAAGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS-3UTR CCA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGATGCCACTCTGGGAAATaGCCCGATGGAAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: PLCIDFGVALGEISVGGRCHSGK*PDGRDP
Trigger: CGGGTCTCTTCCATCGGGCCATTTCCCAGAGTGGCA...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CAGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACGATGAAACCTTCCCCTaGGTCAGGAGCACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: QGQWQSGSTSHKKESQGDDETFP*VRSTKG
Trigger: CCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATC...GTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGCCTGCCAGCAAGTACTaGGGCGGGAGGAATTGTAAC +
Preference number: 4 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGPASKY*GGRNCN
Trigger: GTTACAATTCCTCCCGCCCCAGTACTTGCTGGCAGG...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCAGCCAGCTCCTGCTGTaGGCAGGAGTGATGGCAACA +
Preference number: 4 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGSQLLL*AGVMAT
Trigger: TGTTGCCATCACTCCTGCCCACAGCAGGAGCTGGCT...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCACATCAGTGCGGGGTTTaGCGATTATTCCACGAGCGT +
Preference number: 4 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEAHQCGV*RLFHER
Trigger: ACGCTCGTGGAATAATCGTCAAACCCCGCACTGATG...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCGCCTCCAGGCCAATGTaGACAGACAGGCACAAGGTT +
Preference number: 4 (lower is better)
Translates to: GWKGQCRSHTTGKSSSFGASRPM*TDRHKV
Trigger: AACCTTGTGCCTGTCTGTTCACATTGGCCTGGAGGC...GCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCGCCTCCAGGCCAATGTaGACAGACAGGCACAAGGTT +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGASRPM*TDRHKV
Trigger: AACCTTGTGCCTGTCTGTTCACATTGGCCTGGAGGC...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCACCGTTCCCGCGTGCTaGCGTACATCGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SKLGWVELLSPGMSMASLTVPAC*RTSRPA
Trigger: AGCTGGCCTCGATGTACGTCAGCACGCGGGAACGGT...GAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTACCGTTCCCGCGTGCTaGCGTACATCGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCTVPAC*RTSRPA
Trigger: AGCTGGCCTCGATGTACGTCAGCACGCGGGAACGGT...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAAGCAGCGCCCACGATaGAGGCGCCTCCCGGGAACC +
Preference number: 4 (lower is better)
Translates to: WERRSQTTKSLLHVTTCPKQRPR*RRLPGT
Trigger: GGTTCCCGGGAGGCGCCTTCATCGTGGGCGCTGCTT...AGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCAAGGTAGGGCACAGATaGAACCTTCCCCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALAKVGHR*NLPLGQ
Trigger: CTGACCCAGGGGAAGGTTTCATCTGTGCCCTACCTT...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCCTCATCCCCATGGTCTaGCCCATCAGTGCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: KLGWVELLSPGMSMASLPLIPMV*PISAGF
Trigger: AAACCCCGCACTGATGGGGCAGACCATGGGGATGAG...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCTCTTTGGCTCCTTCCTaGATAGCCACCCTTAGAATT +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIASLAPS*IATLRI
Trigger: AATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGA...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGC +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVGWKGQ*RSHTTG
Trigger: GCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAATGCCGAGCCTGTGCTaGAGAAACACCAGCACCACT +
Preference number: 4 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETMPSLC*RNTSTT
Trigger: AGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCAT...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACC +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGKMPSL*CRNTST
Trigger: GGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTT...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACC +
Preference number: 4 (lower is better)
Translates to: WMVGANPSLAPSCIATLRKMPSL*CRNTST
Trigger: GGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTT...TCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTCAGGAAGCCGAAGATaGCGAGCCTGTGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALASGSRR*RACAAE
Trigger: TTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGA...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCGTGTGCTGTTGTGGTTaGATCCAGCCAGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGVCCCG*IQPGGQ
Trigger: TTGCCCACCTGGCTGGATGCAACCACAACAGCACAC...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGTCCTTTCTCATCGCCTaGCGGTTTAGCGGGAACTTC +
Preference number: 4 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGSFLIA*RFSGNF
Trigger: GAAGTTCCCGCTAAACCGGCAGGCGATGAGAAAGGA...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCACAAGTGGTACCTaGTCCTTGGTGATATTCAAC +
Preference number: 4 (lower is better)
Translates to: PRAWMVGANPSLAPSCIATTSGT*SLVIFN
Trigger: GTTGAATATCACCAAGGAGCAGGTACCACTTGTGGT...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCATCCTTGTTGTAGCGTaGCCAGCAGGGCAGATTCCC +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGILVVA*PAGQIP
Trigger: GGGAATCTGCCCTGCTGGCCACGCTACAACAAGGAT...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTCCAGGGCCTGGATGGTaGGGGCAAACCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCPGPGW*GQTPLW
Trigger: CCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGG...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTCCAGGGCCTGGATGGTaGGGGCAAACCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LKRPPLCIDFGVALGEISPGPGW*GQTPLW
Trigger: CCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGG...ACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGCTCTAGCTTTGGCCTaGAGGCAGCAGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSLAPSCIATLRIASASQALALA*RQQGAP
Trigger: AGGAGCTCCCTGCTGCCTCCAGGCCAAAGCTAGAGC...CTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp CAGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACCCTGTGTATAGACTTTaGAGTGGCCCTGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: QGQWQSGSTSHKKESQGDPVYRL*SGPGGD
Trigger: ATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGG...GTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTCAGTTCCCGCGCGCGTaGCTGTCGTCCGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPQFPRA*LSSVLR
Trigger: CCTGAGCACGGACGACAGCCACGCGCGCGGGAACTG...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCACAATGCCACTCTGGGAAATaGCCCGATGGAAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: SMSQPALGLQANVNRQAQCHSGK*PDGRDP
Trigger: CGGGTCTCTTCCATCGGGCCATTTCCCAGAGTGGCA...TTGTGCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGGTGGGCAACCTTCTTaGCCACTTTCAGTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEAGGQPS*PLSVGY
Trigger: GTAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACC...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTTGCATCCAGCCAGGTaGGCAACCTTCTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALALHPAR*ATFLAT
Trigger: AGTGGCCAAGAAGGTTGCCCACCTGGCTGGATGCAA...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGATCTGTGTGCTGTTGTaGTTGCATCCAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGICVLL*LHPARW
Trigger: CCACCTGGCTGGATGCAACCACAACAGCACACAGAT...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CAGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACATCTGTGTGCTGTTGTaGTTGCATCCAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QGQWQSGSTSHKKESQGDICVLL*LHPARW
Trigger: CCACCTGGCTGGATGCAACCACAACAGCACACAGAT...GTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAACACACGCATCACCTTaGTCCCTGATAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEATHASP*SLIVPS
Trigger: TGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGT...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGACACACGCATCACCTTaGTCCCTGATAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ELLSPGMSMASLPRAWMVTHASP*SLIVPS
Trigger: TGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGT...CACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCTCTTCCGGGTCTCTCTaGAAGTTCAGTTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATSSGSL*KFSWRN
Trigger: ATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGA...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCACACCAAAGGGTCATCTaGGATCACCACACCATCCAC +
Preference number: 4 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEAHQRVI*DHHTIH
Trigger: GTGGATGGTGTGGTGATCCCAGATGACCCTTTGGTG...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGAGATGAAACCTTCCCCTaGGTCAGGAGCACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: PLCIDFGVALGEISVGGRDETFP*VRSTKG
Trigger: CCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATC...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACACCTTCTCCTTACCCATaGAAAGGCCTGTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETPSPYP*KGLWRR
Trigger: CCTTCGCCACAGGCCTTTCCATGGGTAAGGAGAAGG...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCACCTTCTCCTTACCCATaGAAAGGCCTGTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPPSPYP*KGLWRR
Trigger: CCTTCGCCACAGGCCTTTCCATGGGTAAGGAGAAGG...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGGCAGATTCCCATCATTaGGGTTTCCTGTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGADSHH*GFLCGQ
Trigger: TTGCCCGCACAGGAAACCCCAATGATGGGAATCTGC...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCAGTCCCCGCCGCTCTaGCCACAGCTGCGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPQSPPL*PQLRSQ
Trigger: TTGGGACCGCAGCTGTGGCCAGAGCGGCGGGGACTG...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR TCA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAACTGGATGTCAACAGTaGAGTAGAGGGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEATGCQQ*SRGASW
Trigger: CCATGATGCCCCTCTACTTCACTGTTGACATCCAGT...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCTCAACACTTCTTTATTaGAGAGACCACCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PGMSMASLPRAWMVGANPSTLLY*RDHPCV
Trigger: TACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGA...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTACCGTTCCCGCGTGCTaGCGTACATCGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LAPSCIATLRIASASQVFTVPAC*RTSRPA
Trigger: AGCTGGCCTCGATGTACGTCAGCACGCGGGAACGGT...AAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR TCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGACAGACAGTCCTCGCTaGAGCGCAGCCACTTGTACC +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVTDSPR*SAATCT
Trigger: GGTACAAGTGGCTGCGCTTCAGCGAGGACTGTCTGT...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAAGGTAGGGCACAGATaGAACCTTCCCCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KLGWVELLSPGMSMASLPKVGHR*NLPLGQ
Trigger: CTGACCCAGGGGAAGGTTTCATCTGTGCCCTACCTT...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCCTGGAGGTGCAAACCTaGGGATACCTAGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KLGWVELLSPGMSMASLPLEVQT*GYLEEV
Trigger: GACCTCCTCTAGGTATCCTCAGGTTTGCACCTCCAG...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCGGGTTCCATATTTGGTaGCCACTTGAGGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGGFHIW*PLEASW
Trigger: CCAAGAGGCCTCAAGTGGTCACCAAATATGGAACCC...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CAGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAGGATGGATGGTAAATaGCAAGCTGGGTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: QGQWQSGSTSHKKESQGDRMDGK*QAGCSD
Trigger: GTCACTGCACCCAGCTTGGCATTTACCATCCATCCT...GTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGAGGATGGATGGTAAATaGCAAGCTGGGTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGRMDGK*QAGCSD
Trigger: GTCACTGCACCCAGCTTGGCATTTACCATCCATCCT...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCATGCCGAGCCTGTGCTaGAGAAACACCAGCACCACT +
Preference number: 4 (lower is better)
Translates to: KLGWVELLSPGMSMASLPMPSLC*RNTSTT
Trigger: AGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCAT...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GTCAACAGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTGGAAAGGGCAGTGCTCAGGAAGCCGAAGATaGCGAGCCTGTGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VNSEVEGHHGMSGWKGQCSGSRR*RACAAE
Trigger: TTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGA...GCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACTGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGTCATCAGTCCTGAGATaGTCATGGCCCCCGCCGACT +
Preference number: 4 (lower is better)
Translates to: PSLAPSCIATLRIASASQSSVLR*SWPPPT
Trigger: AGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGA...CTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTGTGTGCTGTTGTGGTTaGATCCAGCCAGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: CQAGKGSAGPTQQAKALAVCCCG*IQPGGQ
Trigger: TTGCCCACCTGGCTGGATGCAACCACAACAGCACAC...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GAGGCTAGGGGTGACATCATCAGTCCTGAGATGCTCATGGCCCCCGCCGACTGGACCACAAGTGGTACCTaGTCCTTGGTGATATTCAAC +
Preference number: 4 (lower is better)
Translates to: EARGDIISPEMLMAPADWTTSGT*SLVIFN
Trigger: GTTGAATATCACCAAGGAGCAGGTACCACTTGTGGT...CCAGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGATGTCACCCCTAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR GCA 90 bp GTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGCATTGGGGTTTCCTGTaGGGGCAAAGTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VCSMSQPALGLQANVNRQHWGFL*GQSWPS
Trigger: ACTGGGCCAACTTTGCCCGCACAGGAAACCCCAATG...CTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTCTGCTCTTAATCCCTaGCAGCAAGTACTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: CQAGKGSAGPTQQAKALASALNP*QQVLGR
Trigger: CCGCCCCAGTACTTGCTGGCAGGGATTAAGAGCAGA...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTATCCTTGTTGTAGCGTaGCCAGCAGGGCAGATTCCC +
Preference number: 4 (lower is better)
Translates to: GANPSLAPSCIATLRIASILVVA*PAGQIP
Trigger: GGGAATCTGCCCTGCTGGCCACGCTACAACAAGGAT...AGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCACAAATCCTTGTTGTAGCGTaGCCAGCAGGGCAGATTCCC +
Preference number: 4 (lower is better)
Translates to: SMSQPALGLQANVNRQAQILVVA*PAGQIP
Trigger: GGGAATCTGCCCTGCTGGCCACGCTACAACAAGGAT...TTGTGCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAAGTAGAGGGGCATCATaGGATGTCAGGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPSRGAS*DVRLER
Trigger: CCTTTCCAGCCTGACATCCCATGATGCCCCTCTACT...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCACCTGTGTATAGACTTTaGAGTGGCCCTGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPPVYRL*SGPGGD
Trigger: ATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGG...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCCTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGLLHHK*YLLLGD
Trigger: ATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAG...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCTACATCGAGGCCAGCTaGCCCCAGGACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EDPKLPKVCSMSQPALGLYIEAS*PQDSCR
Trigger: CCTGCAGGAGTCCTGGGGCCAGCTGGCCTCGATGTA...GAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCAGGGTCACATTTCCTaGGTCTCCCCCGAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SKLGWVELLSPGMSMASLQGHIS*VSPEGC
Trigger: GCAGCCTTCGGGGGAGACCCAGGAAATGTGACCCTG...GAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTGTCCTGAGATGCTCATaGCCCCCGCCGACTGGCCGA +
Preference number: 4 (lower is better)
Translates to: WERRSQTTKSLLHVTTCPVLRCS*PPPTGR
Trigger: TCGGCCAGTCGGCGGGGGCCATGAGCATCTCAGGAC...AGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAACACACGCATCACCTTaGTCCCTGATAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETTHASP*SLIVPS
Trigger: TGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGT...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCACTCCTAAAAAGACTTaGATGGGTGTCTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATTPKKT*MGVFPT
Trigger: TGTGGGGAAGACACCCATCCAAGTCTTTTTAGGAGT...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp ATCCACCACAGGGCTCATGGACCAGATAATCTCTTCCGGGTCTCTCTGGAAGTTGGGCTCCGGGGGTTCTaGAGGTGCAAACCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: IHHRAHGPDNLFRVSLEVGLRGF*RCKPED
Trigger: ATCCTCAGGTTTGCACCTCCAGAACCCCCGGAGCCC...AACTTCCAGAGAGACCCGGAAGAGATTATCTGGTCCATGAGCCCTGTGGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS-3UTR CCA 90 bp TCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCGGGCTCCGGGGGTTCTaGAGGTGCAAACCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SKLGWVELLSPGMSMASLGLRGF*RCKPED
Trigger: ATCCTCAGGTTTGCACCTCCAGAACCCCCGGAGCCC...GAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACATGGCAACACTGTGGATaGCATGGTAGCCGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETWQHCG*HGSRVY
Trigger: GTAGACACGGCTACCATGCCATCCACAGTGTTGCCA...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCCCATCTTCTTCTCCTTaGGCTTCATGCCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGPSSSP*ASCPLL
Trigger: CAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGG...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAACTGGATGTCAACAGTaGAGTAGAGGGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETTGCQQ*SRGASW
Trigger: CCATGATGCCCCTCTACTTCACTGTTGACATCCAGT...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGTCACAAGGAGACATTaGAGGGTGGGAGGATTTGAA +
Preference number: 4 (lower is better)
Translates to: NSCPQVCPWLVSPGPGWWVTRRH*RVGGFE
Trigger: TTCAAATCCTCCCACCCTTCAATGTCTCCTTGTGAC...CCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp CAGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAGACAGGCACAAGGTTaGGCAGGATGGATGGTAAAT +
Preference number: 4 (lower is better)
Translates to: QGQWQSGSTSHKKESQGDRQAQG*AGWMVN
Trigger: ATTTACCATCCATCCTGCTCAACCTTGTGCCTGTCT...GTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGAGACAGGCACAAGGTTaGGCAGGATGGATGGTAAAT +
Preference number: 4 (lower is better)
Translates to: NSCPQVCPWLVSPGPGWWRQAQG*AGWMVN
Trigger: ATTTACCATCCATCCTGCTCAACCTTGTGCCTGTCT...CCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GGGTTTCTCGGTGGTAGTGAGCAGTCTGCAGTGTGGCATACACGAAAGTGGCATGCCTCCAGGCCAATGTaGACAGACAGGCACAAGGTT +
Preference number: 4 (lower is better)
Translates to: GFLGGSEQSAVWHTRKWHASRPM*TDRHKV
Trigger: AACCTTGTGCCTGTCTGTTCACATTGGCCTGGAGGC...ATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS-3UTR TCA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCTCAACACTTCTTTATTaGAGAGACCACCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: RAWMVGANPSLAPSCIATSTLLY*RDHPCV
Trigger: TACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGA...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp CAGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACTCCAGTCATGCTCATTaGCATTGTCCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: QGQWQSGSTSHKKESQGDSSHAH*HCPGTP
Trigger: AGGAGTACCTGGACAATGTCAATGAGCATGACTGGA...GTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTACAGACAGTCCTCGCTaGAGCGCAGCCACTTGTACC +
Preference number: 4 (lower is better)
Translates to: LKRPPLCIDFGVALGEISTDSPR*SAATCT
Trigger: GGTACAAGTGGCTGCGCTTCAGCGAGGACTGTCTGT...ACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTGCAGCAGGGAGCTCCTaGAGTTCTAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: CSSKLGWVELLSPGMSMAAAGSS*SSKLGW
Trigger: CCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC...AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGATGCCGAGCCTGTGCTaGAGAAACACCAGCACCACT +
Preference number: 4 (lower is better)
Translates to: PSLAPSCIATLRIASASQMPSLC*RNTSTT
Trigger: AGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCAT...CTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGATGCCGAGCCTGTGCTaGAGAAACACCAGCACCACT +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVMPSLC*RNTSTT
Trigger: AGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCAT...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGCATTGGGGTTTCCTGTaGGGGCAAAGTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVHWGFL*GQSWPS
Trigger: ACTGGGCCAACTTTGCCCGCACAGGAAACCCCAATG...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp ATCACCACACCATCCACCACAGGGCTCATGGACCAGATAATCTCTTCCGGGTCTTACATCTCATCCCCATaGTCTGCCCCATCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: ITTPSTTGLMDQIISSGSYISSP*SAPSVR
Trigger: CCGCACTGATGGGGCAGACCATGGGGATGAGATGTA...AGACCCGGAAGAGATTATCTGGTCCATGAGCCCTGTGGTGGATGGTGTGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR CCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGTACATCTCATCCCCATaGTCTGCCCCATCAGTGCGG +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVYISSP*SAPSVR
Trigger: CCGCACTGATGGGGCAGACCATGGGGATGAGATGTA...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCCCAGGGCCTGGATGGTaGGGGCAAACCCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: DWYRLIQKAIFFSLSFMPPGPGW*GQTPLW
Trigger: CCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGG...GGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGTCTGTACCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp GAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EDPKLPKVCSMSQPALGLPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...GAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTGCTCTAGCTTTGGCCTaGAGGCAGCAGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSKLGWVELLSPGMSMASALALA*RQQGAP
Trigger: AGGAGCTCCCTGCTGCCTCCAGGCCAAAGCTAGAGC...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGGTGTTGACAGGGCCTaGCCTAACTGGATGTCAACA +
Preference number: 4 (lower is better)
Translates to: VCSMSQPALGLQANVNRQGVDRA*PNWMST
Trigger: TGTTGACATCCAGTTAGGCCAGGCCCTGTCAACACC...CTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CAGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACGGAGACATTGAAGGGTaGGAGGATTTGAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: QGQWQSGSTSHKKESQGDGDIEG*EDLKKG
Trigger: TCCCTTCTTCAAATCCTCCCACCCTTCAATGTCTCC...GTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGCCTGTGTATAGACTTTaGAGTGGCCCTGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: VCSMSQPALGLQANVNRQPVYRL*SGPGGD
Trigger: ATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGG...CTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCTCAGGCAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCAGCCAGGTGCCTGTGTATAGACTTTaGAGTGGCCCTGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: PQAVYQDLCAVVVASSQVPVYRL*SGPGGD
Trigger: ATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGG...CACCTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp GAAATGGCCCGATGGAAGAGACCCGAGGCTAGGGGTGACATCATCAGTCCTGAGGAGCAGTCTGCAGTGTaGCATACACGAAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: EMARWKRPEARGDIISPEEQSAV*HTRKWH
Trigger: ATGCCACTTTCGTGTATGCCACACTGCAGACTGCTC...CTCAGGACTGATGATGTCACCCCTAGCCTCGGGTCTCTTCCATCGGGCCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCGAGCAGTCTGCAGTGTaGCATACACGAAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALAEQSAV*HTRKWH
Trigger: ATGCCACTTTCGTGTATGCCACACTGCAGACTGCTC...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGGAACCAGACCATCACTaGCAGCTGGGGATCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ERRSQTTKSLLHVTTCPREPDHH*QLGIPG
Trigger: CCCGGGGATCCCCAGCTGCCAGTGATGGTCTGGTTC...CCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTATGGCCCCCGCCGACTaGCCGAACAGGGTCACATTT +
Preference number: 4 (lower is better)
Translates to: SSKLGWVELLSPGMSMASMAPAD*PNRVTF
Trigger: AAATGTGACCCTGTTCGGCCAGTCGGCGGGGGCCAT...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCTGCCACTCTGGGAAATaGCCCGATGGAAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: SKLGWVELLSPGMSMASLCHSGK*PDGRDP
Trigger: CGGGTCTCTTCCATCGGGCCATTTCCCAGAGTGGCA...GAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGTTGCATCCAGCCAGGTaGGCAACCTTCTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVLHPAR*ATFLAT
Trigger: AGTGGCCAAGAAGGTTGCCCACCTGGCTGGATGCAA...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCTCAGGCAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCAGCCAGGTGATCTGTGTGCTGTTGTaGTTGCATCCAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PQAVYQDLCAVVVASSQVICVLL*LHPARW
Trigger: CCACCTGGCTGGATGCAACCACAACAGCACACAGAT...CACCTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp GAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGAATCTCATCTTGTTaGACACACGCATCACCTTGG +
Preference number: 4 (lower is better)
Translates to: ELLSPGMSMASLPRAWMVGISSC*THASPW
Trigger: CCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCC...CACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTCACCAAAGGGTCATCTaGGATCACCACACCATCCAC +
Preference number: 4 (lower is better)
Translates to: GANPSLAPSCIATLRIASHQRVI*DHHTIH
Trigger: GTGGATGGTGTGGTGATCCCAGATGACCCTTTGGTG...AGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCCACCAAAGGGTCATCTaGGATCACCACACCATCCAC +
Preference number: 4 (lower is better)
Translates to: KLGWVELLSPGMSMASLPHQRVI*DHHTIH
Trigger: GTGGATGGTGTGGTGATCCCAGATGACCCTTTGGTG...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCAGATTCCCATCATTaGGGTTTCCTGTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: VCSMSQPALGLQANVNRQADSHH*GFLCGQ
Trigger: TTGCCCGCACAGGAAACCCCAATGATGGGAATCTGC...CTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTGGGCTCCGGGGGTTCTaGAGGTGCAAACCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LAPSCIATLRIASASQVFGLRGF*RCKPED
Trigger: ATCCTCAGGTTTGCACCTCCAGAACCCCCGGAGCCC...AAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCTGGCAACACTGTGGATaGCAACACTGTGGATGGCAT +
Preference number: 4 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGWQHCG*QHCGWH
Trigger: ATGCCATCCACAGTGTTGCCATCCACAGTGTTGCCA...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCCAGACCATCACTCACTaGCAGCTGGGGATCCCCGGG +
Preference number: 4 (lower is better)
Translates to: DWYRLIQKAIFFSLSFMPQTITH*QLGIPG
Trigger: CCCGGGGATCCCCAGCTGCCAGTGAGTGATGGTCTG...GGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGTCTGTACCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000567587.6
3UTR CAA 72 bp TGTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTaGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CGWERRSQTTKS*LHVTTCPRPPG
Trigger: GCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp CCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGCATCAGTGCGGGGTTTaGCGATTATTCCACGAGCGT +
Preference number: 4 (lower is better)
Translates to: PSLAPSCIATLRIASASQHQCGV*RLFHER
Trigger: ACGCTCGTGGAATAATCGTCAAACCCCGCACTGATG...CTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR TCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGCATCAGTGCGGGGTTTaGCGATTATTCCACGAGCGT +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVHQCGV*RLFHER
Trigger: ACGCTCGTGGAATAATCGTCAAACCCCGCACTGATG...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GGTGCGGGTACTCCAGAGCATCTTAGTGATGGTTTCCTTTCTCATCGCCTGCCGACTGGATGTCAACAGTaGAGTAGAGGGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: GAGTPEHLSDGFLSHRLPTGCQQ*SRGASW
Trigger: CCATGATGCCCCTCTACTTCACTGTTGACATCCAGT...CGGCAGGCGATGAGAAAGGAAACCATCACTAAGATGCTCTGGAGTACCCGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR TCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCGTCACAAGGAGACATTaGAGGGTGGGAGGATTTGAA +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALAVTRRH*RVGGFE
Trigger: TTCAAATCCTCCCACCCTTCAATGTCTCCTTGTGAC...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAAGACAGGCACAAGGTTaGGCAGGATGGATGGTAAAT +
Preference number: 4 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETRQAQG*AGWMVN
Trigger: ATTTACCATCCATCCTGCTCAACCTTGTGCCTGTCT...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAAGACAGGCACAAGGTTaGGCAGGATGGATGGTAAAT +
Preference number: 4 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPRQAQG*AGWMVN
Trigger: ATTTACCATCCATCCTGCTCAACCTTGTGCCTGTCT...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTCCAGTCATGCTCATTaGCATTGTCCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALASSHAH*HCPGTP
Trigger: AGGAGTACCTGGACAATGTCAATGAGCATGACTGGA...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCTCCAGTCATGCTCATTaGCATTGTCCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGSSHAH*HCPGTP
Trigger: AGGAGTACCTGGACAATGTCAATGAGCATGACTGGA...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGACGAAAGTGGCATCTTaGACTATGTCCATCATACGG +
Preference number: 4 (lower is better)
Translates to: NSCPQVCPWLVSPGPGWWTKVAS*TMSIIR
Trigger: CCGTATGATGGACATAGTTCAAGATGCCACTTTCGT...CCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAACGAAAGTGGCATCTTaGACTATGTCCATCATACGG +
Preference number: 4 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEATKVAS*TMSIIR
Trigger: CCGTATGATGGACATAGTTCAAGATGCCACTTTCGT...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTACAGACAGTCCTCGCTaGAGCGCAGCCACTTGTACC +
Preference number: 4 (lower is better)
Translates to: SSKLGWVELLSPGMSMASTDSPR*SAATCT
Trigger: GGTACAAGTGGCTGCGCTTCAGCGAGGACTGTCTGT...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTAAGGTAGGGCACAGATaGAACCTTCCCCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: NPSLAPSCIATLRIASASKVGHR*NLPLGQ
Trigger: CTGACCCAGGGGAAGGTTTCATCTGTGCCCTACCTT...AGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR TCA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTCTGGAGGTGCAAACCTaGGGATACCTAGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCLEVQT*GYLEEV
Trigger: GACCTCCTCTAGGTATCCTCAGGTTTGCACCTCCAG...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATCTCATCCCCATGGTCTaGCCCATCAGTGCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: KLPKVCSMSQPALGLQANLIPMV*PISAGF
Trigger: AAACCCCGCACTGATGGGGCAGACCATGGGGATGAG...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGTCTTTGGCTCCTTCCTaGATAGCCACCCTTAGAATT +
Preference number: 4 (lower is better)
Translates to: ELLSPGMSMASLPRAWMVSLAPS*IATLRI
Trigger: AATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGA...CACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGC +
Preference number: 4 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPGWKGQ*RSHTTG
Trigger: GCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCTCATCAGTCCTGAGATaGTCATGGCCCCCGCCGACT +
Preference number: 4 (lower is better)
Translates to: EDPKLPKVCSMSQPALGLSSVLR*SWPPPT
Trigger: AGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGA...GAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATATCATCAGTCCTGAGATaGTCATGGCCCCCGCCGACT +
Preference number: 4 (lower is better)
Translates to: LLKRPPLCIDFGVALGEISSVLR*SWPPPT
Trigger: AGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGA...TATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCGTGTGCTGTTGTGGTTaGATCCAGCCAGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SKLGWVELLSPGMSMASLVCCCG*IQPGGQ
Trigger: TTGCCCACCTGGCTGGATGCAACCACAACAGCACAC...GAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCTTACCAGGATCTGTGTaGTGTTGTGGTTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGLPGSV*CCGCIQ
Trigger: CTGGATGCAACCACAACAGCACACAGATCCTGGTAA...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACATTACCAGGATCTGTGTaGTGTTGTGGTTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETLPGSV*CCGCIQ
Trigger: CTGGATGCAACCACAACAGCACACAGATCCTGGTAA...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GCACAGATGAAACCTTCCCCTGGGTCAGGAGCACCAAAGGGTCATCTGGGATCACATCTGGAGGCTAAGTaGCTTCTCCTTACCCATGGA +
Preference number: 4 (lower is better)
Translates to: AQMKPSPGSGAPKGHLGSHLEAK*LLLTHG
Trigger: TCCATGGGTAAGGAGAAGGCACTTAGCCTCCAGATG...TGATCCCAGATGACCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR GCA 90 bp TTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTCATTGGGGTTTCCTGTaGGGGCAAAGTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LKRPPLCIDFGVALGEISHWGFL*GQSWPS
Trigger: ACTGGGCCAACTTTGCCCGCACAGGAAACCCCAATG...ACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGSSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAGTAGAGGGGCATCATaGGATGTCAGGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVSRGAS*DVRLER
Trigger: CCTTTCCAGCCTGACATCCCATGATGCCCCTCTACT...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGGGTGTTGACAGGGCCTaGCCTAACTGGATGTCAACA +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVGVDRA*PNWMST
Trigger: TGTTGACATCCAGTTAGGCCAGGCCCTGTCAACACC...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCGGAGACATTGAAGGGTaGGAGGATTTGAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGGDIEG*EDLKKG
Trigger: TCCCTTCTTCAAATCCTCCCACCCTTCAATGTCTCC...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGCTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PSLAPSCIATLRIASASQLLHHK*YLLLGD
Trigger: ATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAG...CTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp GTCAACAGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTGGAAAGGGCAGTGCGAGCAGTCTGCAGTGTaGCATACACGAAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VNSEVEGHHGMSGWKGQCEQSAV*HTRKWH
Trigger: ATGCCACTTTCGTGTATGCCACACTGCAGACTGCTC...GCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACTGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCAGATTCCCATCATTaGGGTTTCTCGGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: GANPSLAPSCIATLRIASADSHH*GFSVVV
Trigger: CACTACCACCGAGAAACCCCAATGATGGGAATCTGC...AGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp CCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTTACATCGAGGCCAGCTaGCCCCAGGACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLLLRSLRLVQTHPKSHLYIEAS*PQDSCR
Trigger: CCTGCAGGAGTCCTGGGGCCAGCTGGCCTCGATGTA...AAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TCCTTGAGCTTCATGCCCACTCTTGTGGTAAAATCCAGCTGCAGGTACTTTTCAGAACCAGACCATCACTaGCAGCTGGGGATCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SLSFMPTLVVKSSCRYFSEPDHH*QLGIPG
Trigger: CCCGGGGATCCCCAGCTGCCAGTGATGGTCTGGTTC...TGAAAAGTACCTGCAGCTGGATTTTACCACAAGAGTGGGCATGAAGCTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR CCA 90 bp GACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCATGGCCCCCGCCGACTaGCCGAACAGGGTCACATTT +
Preference number: 4 (lower is better)
Translates to: DWYRLIQKAIFFSLSFMPMAPAD*PNRVTF
Trigger: AAATGTGACCCTGTTCGGCCAGTCGGCGGGGGCCAT...GGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGTCTGTACCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp TGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTATGGCCCCCGCCGACTaGCCGAACAGGGTCACATTT +
Preference number: 4 (lower is better)
Translates to: WERRSQTTKSLLHVTTCPMAPAD*PNRVTF
Trigger: AAATGTGACCCTGTTCGGCCAGTCGGCGGGGGCCAT...AGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGAATTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGGTCCTGAGATGCTCATaGCCCCCGCCGACTGGCCGA +
Preference number: 4 (lower is better)
Translates to: RIASASQVFETGTDSSKKVLRCS*PPPTGR
Trigger: TCGGCCAGTCGGCGGGGGCCATGAGCATCTCAGGAC...CTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATATGCCACTCTGGGAAATaGCCCGATGGAAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: LLKRPPLCIDFGVALGEICHSGK*PDGRDP
Trigger: CGGGTCTCTTCCATCGGGCCATTTCCCAGAGTGGCA...TATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGATCTGTGTGCTGTTGTaGTTGCATCCAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVICVLL*LHPARW
Trigger: CCACCTGGCTGGATGCAACCACAACAGCACACAGAT...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCGGAATCTCATCTTGTTaGACACACGCATCACCTTGG +
Preference number: 4 (lower is better)
Translates to: GWKGQCRSHTTGKSSSFGGISSC*THASPW
Trigger: CCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCC...GCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCTCTTCCGGGTCTCTCTaGAAGTTCAGTTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGSSGSL*KFSWRN
Trigger: ATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGA...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCTCTTCCGGGTCTCTCTaGAAGTTCAGTTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GWKGQCRSHTTGKSSSFGSSGSL*KFSWRN
Trigger: ATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGA...GCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp ATCTCTTCCGGGTCTCTCTGGAAGTTCAGTTGGAGGAATCTCATCTTGTTGGACCCATGGAAAGGCCTGTaGCGAAGGGGCCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: ISSGSLWKFSWRNLILLDPWKGL*RRGPQR
Trigger: TCTTTGGGGGCCCCTTCGCCACAGGCCTTTCCATGG...GTCCAACAAGATGAGATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR CCA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTCCATGGAAAGGCCTGTaGCGAAGGGGCCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPPWKGL*RRGPQR
Trigger: TCTTTGGGGGCCCCTTCGCCACAGGCCTTTCCATGG...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTACCATGGAAAGGCCTGTaGCGAAGGGGCCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: GREDPKLPKVCSMSQPALPWKGL*RRGPQR
Trigger: TCTTTGGGGGCCCCTTCGCCACAGGCCTTTCCATGG...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGCTAAAAAGACTTGGATaGGTGTCTTCCCCACATGCA +
Preference number: 4 (lower is better)
Translates to: NSCPQVCPWLVSPGPGWWLKRLG*VSSPHA
Trigger: TGCATGTGGGGAAGACACCCATCCAAGTCTTTTTAG...CCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGCTAAAAAGACTTGGATaGGTGTCTTCCCCACATGCA +
Preference number: 4 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGLKRLG*VSSPHA
Trigger: TGCATGTGGGGAAGACACCCATCCAAGTCTTTTTAG...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCTACCTAGAGGAGGTCTaGAGAAGGGGACTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: GWKGQCRSHTTGKSSSFGYLEEV*RRGLLK
Trigger: TTTTAGGAGTCCCCTTCTCCAGACCTCCTCTAGGTA...GCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCCACTTGAGGCCTCTTaGTGTGCAAGGCACCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSKLGWVELLSPGMSMASPLEAS*CARHPR
Trigger: CCTTGGGTGCCTTGCACACCAAGAGGCCTCAAGTGG...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
3UTR CAA 72 bp TGGAGGAATCTCATCTTGTTGGACACACGCATCACCTaGGTCCCTGATAGTGCCCTCAGGCAGTTTACCAGG +
Preference number: 4 (lower is better)
Translates to: WRNLILLDTRIT*VPDSALRQFTR
Trigger: CCTGGTAAACTGCCTGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR TCA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCGTCACAAGGAGACATTaGAGGGTGGGAGGATTTGAA +
Preference number: 4 (lower is better)
Translates to: KLGWVELLSPGMSMASLPVTRRH*RVGGFE
Trigger: TTCAAATCCTCCCACCCTTCAATGTCTCCTTGTGAC...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGCCTCCAGGCCAATGTaGACAGACAGGCACAAGGTT +
Preference number: 4 (lower is better)
Translates to: KLPKVCSMSQPALGLQANASRPM*TDRHKV
Trigger: AACCTTGTGCCTGTCTGTTCACATTGGCCTGGAGGC...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GTCAACAGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTGGAAAGGGCAGTGCTCCAGTCATGCTCATTaGCATTGTCCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: VNSEVEGHHGMSGWKGQCSSHAH*HCPGTP
Trigger: AGGAGTACCTGGACAATGTCAATGAGCATGACTGGA...GCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCACAATCCAGTCATGCTCATTaGCATTGTCCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: SMSQPALGLQANVNRQAQSSHAH*HCPGTP
Trigger: AGGAGTACCTGGACAATGTCAATGAGCATGACTGGA...TTGTGCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCACGAAAGTGGCATCTTaGACTATGTCCATCATACGG +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGTKVAS*TMSIIR
Trigger: CCGTATGATGGACATAGTTCAAGATGCCACTTTCGT...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTCTTGGCCACTTTCAGTGGGTTACTAGTGATGAAAAGTCTGAATAACGCGGTGACCGTTCCCGCGTGCTaGCGTACATCGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FLATFSGLLVMKSLNNAVTVPAC*RTSRPA
Trigger: AGCTGGCCTCGATGTACGTCAGCACGCGGGAACGGT...CACCGCGTTATTCAGACTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR TCA 90 bp TGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTACAGACAGTCCTCGCTaGAGCGCAGCCACTTGTACC +
Preference number: 4 (lower is better)
Translates to: WERRSQTTKSLLHVTTCPTDSPR*SAATCT
Trigger: GGTACAAGTGGCTGCGCTTCAGCGAGGACTGTCTGT...AGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGTATTTGGTGACCACTTaGGGCCTCTTGGTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVYLVTT*GLLVCK
Trigger: CTTGCACACCAAGAGGCCTCAAGTGGTCACCAAATA...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCTCTTTGGCTCCTTCCTaGATAGCCACCCTTAGAATT +
Preference number: 4 (lower is better)
Translates to: GWKGQCRSHTTGKSSSFGSLAPS*IATLRI
Trigger: AATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGA...GCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCAGCATCTTCCAGTCATaGTCATTGACATTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGSIFQS*SLTLSR
Trigger: CCTGGACAATGTCAATGAGCATGACTGGAAGATGCT...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCAGCATCTTCCAGTCATaGTCATTGACATTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GWKGQCRSHTTGKSSSFGSIFQS*SLTLSR
Trigger: CCTGGACAATGTCAATGAGCATGACTGGAAGATGCT...GCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACC +
Preference number: 4 (lower is better)
Translates to: SSKLGWVELLSPGMSMASKMPSL*CRNTST
Trigger: GGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTT...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GGAAGTTCAGTTGGAGGAATCTCATCTTGTTGGACACACGCATCACCTTGGTCCTCAGGAAGCCGAAGATaGCGAGCCTGTGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GSSVGGISSCWTHASPWSSGSRR*RACAAE
Trigger: TTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGA...GGACCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCAACTGAACTTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR GCA 90 bp AGTGCGGGGTTTGACGATTATTCCACGAGCGTGGTGCTCAAATTCATACAGGTATCATCAGTCCTGAGATaGTCATGGCCCCCGCCGACT +
Preference number: 4 (lower is better)
Translates to: SAGFDDYSTSVVLKFIQVSSVLR*SWPPPT
Trigger: AGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGA...TACCTGTATGAATTTGAGCACCACGCTCGTGGAATAATCGTCAAACCCCGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR GCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCACCACAAGTGGTACCTaGTCCTTGGTGATATTCAAC +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALATTSGT*SLVIFN
Trigger: GTTGAATATCACCAAGGAGCAGGTACCACTTGTGGT...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCTCTGCTCTTAATCCCTaGCAGCAAGTACTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: EDPKLPKVCSMSQPALGLSALNP*QQVLGR
Trigger: CCGCCCCAGTACTTGCTGGCAGGGATTAAGAGCAGA...GAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAATCCTTGTTGTAGCGTaGCCAGCAGGGCAGATTCCC +
Preference number: 4 (lower is better)
Translates to: LLKRPPLCIDFGVALGEIILVVA*PAGQIP
Trigger: GGGAATCTGCCCTGCTGGCCACGCTACAACAAGGAT...TATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp ACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCACTCTTGTGGTCCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: THPKSHLLLLELHAHSCGPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...ACCACAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp CCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCCCCAGGTATGTCCATaGCTAGTCTCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PLLLRSLRLVQTHPKSHLPQVCP*LVSPGP
Trigger: AGGCCCTGGGGAGACTAGCCATGGACATACCTGGGG...AAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTAGAGGGGCATCATaGGATGTCAGGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: CSSKLGWVELLSPGMSMASRGAS*DVRLER
Trigger: CCTTTCCAGCCTGACATCCCATGATGCCCCTCTACT...AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCGGAGACATTGAAGGGTaGGAGGATTTGAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: KLGWVELLSPGMSMASLPGDIEG*EDLKKG
Trigger: TCCCTTCTTCAAATCCTCCCACCCTTCAATGTCTCC...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTCTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCLLHHK*YLLLGD
Trigger: ATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAG...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTCTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LKRPPLCIDFGVALGEISLLHHK*YLLLGD
Trigger: ATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAG...ACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCATGGCATACACGAAAGTaGCATCTTGAACTATGTCCA +
Preference number: 4 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEAWHTRK*HLELCP
Trigger: TGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCTCGAACCAGACCATCACTaGCAGCTGGGGATCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLRSLRLVQTHPKSHLLLEPDHH*QLGIPG
Trigger: CCCGGGGATCCCCAGCTGCCAGTGATGGTCTGGTTC...GAGAAGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
CDS-3UTR CCA 90 bp TGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTGGTGGGCAACCTTCTTaGCCACTTTCAGTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: CSSKLGWVELLSPGMSMAGGQPS*PLSVGY
Trigger: GTAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACC...AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCGGTGGGCAACCTTCTTaGCCACTTTCAGTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: SKLGWVELLSPGMSMASLGGQPS*PLSVGY
Trigger: GTAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACC...GAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GTCAACAGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTGGAAAGGGCAGTGCTCTTCCGGGTCTCTCTaGAAGTTCAGTTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: VNSEVEGHHGMSGWKGQCSSGSL*KFSWRN
Trigger: ATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGA...GCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACTGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTCACCAAAGGGTCATCTaGGATCACCACACCATCCAC +
Preference number: 4 (lower is better)
Translates to: CSSKLGWVELLSPGMSMAHQRVI*DHHTIH
Trigger: GTGGATGGTGTGGTGATCCCAGATGACCCTTTGGTG...AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GCAGGTACTTTTCATCCTTGTTGTAGCGTGGCCAGCAGGGCAGATTCCCATCATCACCAAAGGGTCATCTaGGATCACCACACCATCCAC +
Preference number: 4 (lower is better)
Translates to: AGTFHPCCSVASRADSHHHQRVI*DHHTIH
Trigger: GTGGATGGTGTGGTGATCCCAGATGACCCTTTGGTG...ATGATGGGAATCTGCCCTGCTGGCCACGCTACAACAAGGATGAAAAGTACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp TTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTGATGAAACCTTCCCCTaGGTCAGGAGCACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LAPSCIATLRIASASQVFDETFP*VRSTKG
Trigger: CCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATC...AAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATACCTTCTCCTTACCCATaGAAAGGCCTGTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: LLKRPPLCIDFGVALGEIPSPYP*KGLWRR
Trigger: CCTTCGCCACAGGCCTTTCCATGGGTAAGGAGAAGG...TATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGCTAAAAAGACTTGGATaGGTGTCTTCCCCACATGCA +
Preference number: 4 (lower is better)
Translates to: ETTPVYRLWSGPGGDKCGLKRLG*VSSPHA
Trigger: TGCATGTGGGGAAGACACCCATCCAAGTCTTTTTAG...CCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGACTCCTAAAAAGACTTaGATGGGTGTCTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: ETTPVYRLWSGPGGDKCGTPKKT*MGVFPT
Trigger: TGTGGGGAAGACACCCATCCAAGTCTTTTTAGGAGT...CCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCACTCCTAAAAAGACTTaGATGGGTGTCTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: GWKGQCRSHTTGKSSSFGTPKKT*MGVFPT
Trigger: TGTGGGGAAGACACCCATCCAAGTCTTTTTAGGAGT...GCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGGTGATGGCAACACTGTaGATGGCAACACTGTGGATG +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVVMATL*MATLWM
Trigger: CATCCACAGTGTTGCCATCCACAGTGTTGCCATCAC...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGCCAGCTCCTGCTGTaGGCAGGAGTGATGGCAACA +
Preference number: 4 (lower is better)
Translates to: WERRSQTTKSLLHVTTCPSQLLL*AGVMAT
Trigger: TGTTGCCATCACTCCTGCCCACAGCAGGAGCTGGCT...AGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TCATCTTGTTGGACACACGCATCACCTTGGTCCCTGATAGTGCCCTCAGGCAGTGTCACAAGGAGACATTaGAGGGTGGGAGGATTTGAA +
Preference number: 4 (lower is better)
Translates to: SSCWTHASPWSLIVPSGSVTRRH*RVGGFE
Trigger: TTCAAATCCTCCCACCCTTCAATGTCTCCTTGTGAC...ACTGCCTGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTCCAACAAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR TCA 90 bp ATCTCTTCCGGGTCTCTCTGGAAGTTCAGTTGGAGGAATCTCATCTTGTTGGACGCCTCCAGGCCAATGTaGACAGACAGGCACAAGGTT +
Preference number: 4 (lower is better)
Translates to: ISSGSLWKFSWRNLILLDASRPM*TDRHKV
Trigger: AACCTTGTGCCTGTCTGTTCACATTGGCCTGGAGGC...GTCCAACAAGATGAGATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR TCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTCAACACTTCTTTATTaGAGAGACCACCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALASTLLY*RDHPCV
Trigger: TACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGA...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGCTCAACACTTCTTTATTaGAGAGACCACCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LLHVTTCPRPPGQCEQTGSTLLY*RDHPCV
Trigger: TACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGA...GCCTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATATCCAGGGTCCGCAGTaGGAAGACGGAACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LPLLLRSLRLVQTHPKSHIQGPQ*EDGTQS
Trigger: GCTTTGGGTTCCGTCTTCTCACTGCGGACCCTGGAT...ATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR TCA 90 bp CCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTACAGACAGTCCTCGCTaGAGCGCAGCCACTTGTACC +
Preference number: 4 (lower is better)
Translates to: PLLLRSLRLVQTHPKSHLTDSPR*SAATCT
Trigger: GGTACAAGTGGCTGCGCTTCAGCGAGGACTGTCTGT...AAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR TCA 90 bp TGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAAGGTAGGGCACAGATaGAACCTTCCCCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: WERRSQTTKSLLHVTTCPKVGHR*NLPLGQ
Trigger: CTGACCCAGGGGAAGGTTTCATCTGTGCCCTACCTT...AGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTACTGGAGGTGCAAACCTaGGGATACCTAGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GREDPKLPKVCSMSQPALLEVQT*GYLEEV
Trigger: GACCTCCTCTAGGTATCCTCAGGTTTGCACCTCCAG...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAATTGTAACCAGCTTCTaGCCAGCCCACAGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LLKRPPLCIDFGVALGEIIVTSF*PAHSLV
Trigger: GACAAGGCTGTGGGCTGGTCAGAAGCTGGTTACAAT...TATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540947.6
CDS-3UTR GCA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCGTGGTAAAATCCAGCTaGAGGTACTTTTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: AGKGSAGPTQQAKALALAVVKSS*RYFSSL
Trigger: CAAGGATGAAAAGTACCTGCAGCTGGATTTTACCAC...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATGCAGCAGGGAGCTCCTaGAGTTCTAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPLLLRSLRLVQTHPKSHAAGSS*SSKLGW
Trigger: CCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC...ATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCAAACTACCAAAAGTTTaGTCCATGTCACAACCTGCC +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGKLPKV*SMSQPA
Trigger: GGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AGTGCGGGGTTTGACGATTATTCCACGAGCGTGGTGCTCAAATTCATACAGGTAATGCCGAGCCTGTGCTaGAGAAACACCAGCACCACT +
Preference number: 4 (lower is better)
Translates to: SAGFDDYSTSVVLKFIQVMPSLC*RNTSTT
Trigger: AGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCAT...TACCTGTATGAATTTGAGCACCACGCTCGTGGAATAATCGTCAAACCCCGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR GCA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTATGCCGAGCCTGTGCTaGAGAAACACCAGCACCACT +
Preference number: 4 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPMPSLC*RNTSTT
Trigger: AGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCAT...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCTCAGGAAGCCGAAGATaGCGAGCCTGTGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: DWYRLIQKAIFFSLSFMPSGSRR*RACAAE
Trigger: TTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGA...GGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGTCTGTACCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR GCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGTGTGCTGTTGTGGTTaGATCCAGCCAGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GREDPKLPKVCSMSQPALVCCCG*IQPGGQ
Trigger: TTGCCCACCTGGCTGGATGCAACCACAACAGCACAC...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTCATCTGGAGGCTAAGTaGCTTCTCCTTACCCATGGA +
Preference number: 4 (lower is better)
Translates to: LKRPPLCIDFGVALGEISHLEAK*LLLTHG
Trigger: TCCATGGGTAAGGAGAAGGCACTTAGCCTCCAGATG...ACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCATTATTCCACGAGCGTaGTGCTCAAATTCATACAGG +
Preference number: 4 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGIIPRA*CSNSYR
Trigger: CCTGTATGAATTTGAGCACCACGCTCGTGGAATAAT...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTATCCTTGTTGTAGCGTaGCCAGCAGGGCAGATTCCC +
Preference number: 4 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPILVVA*PAGQIP
Trigger: GGGAATCTGCCCTGCTGGCCACGCTACAACAAGGAT...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TGGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACGGTTTCGTAGCAGCTCTAGCTTTGGCCTaGAGGCAGCAGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: WHTRKWHLELCPSYGFVAALALA*RQQGAP
Trigger: AGGAGCTCCCTGCTGCCTCCAGGCCAAAGCTAGAGC...TGCTACGAAACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp TCATCTTGTTGGACACACGCATCACCTTGGTCCCTGATAGTGCCCTCAGGCAGTGGAGACATTGAAGGGTaGGAGGATTTGAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SSCWTHASPWSLIVPSGSGDIEG*EDLKKG
Trigger: TCCCTTCTTCAAATCCTCCCACCCTTCAATGTCTCC...ACTGCCTGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTCCAACAAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp GGCACAGATGAAACCTTCCCCTGGGTCAGGAGCACCAAAGGGTCATCTGGGATCTGGCATACACGAAAGTaGCATCTTGAACTATGTCCA +
Preference number: 4 (lower is better)
Translates to: GTDETFPWVRSTKGSSGIWHTRK*HLELCP
Trigger: TGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA...GATCCCAGATGACCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp TGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTGCAGATTCCCATCATTaGGGTTTCTCGGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: CSSKLGWVELLSPGMSMAADSHH*GFSVVV
Trigger: CACTACCACCGAGAAACCCCAATGATGGGAATCTGC...AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATTGGGAAATGGCCCGATaGAAGAGACCCGAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: LPLLLRSLRLVQTHPKSHWEMAR*KRPEAR
Trigger: CCTAGCCTCGGGTCTCTTCCATCGGGCCATTTCCCA...ATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp GAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGCTTGGCCACTTTCAGTaGGTTACTAGTGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: ETTPVYRLWSGPGGDKCGLGHFQ*VTSDEK
Trigger: CTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAG...CCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGGTGGGCAACCTTCTTaGCCACTTTCAGTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: KLPKVCSMSQPALGLQANGGQPS*PLSVGY
Trigger: GTAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACC...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTTTGCATCCAGCCAGGTaGGCAACCTTCTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPLHPAR*ATFLAT
Trigger: AGTGGCCAAGAAGGTTGCCCACCTGGCTGGATGCAA...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTGCAGATTCCCATCATTaGGGTTTCCTGTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: LAPSCIATLRIASASQVFADSHH*GFLCGQ
Trigger: TTGCCCGCACAGGAAACCCCAATGATGGGAATCTGC...AAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR CCA 90 bp TTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTCAGTTCCCGCGCGCGTaGCTGTCGTCCGTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: FRSNQHFFIEETTPVYRLQFPRA*LSSVPV
Trigger: GACTGGCACGGACGACAGCCACGCGCGCGGGAACTG...AAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR CCA 90 bp GTCAACAGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTGGAAAGGGCAGTGCACTCCTAAAAAGACTTaGATGGGTGTCTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: VNSEVEGHHGMSGWKGQCTPKKT*MGVFPT
Trigger: TGTGGGGAAGACACCCATCCAAGTCTTTTTAGGAGT...GCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACTGTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATCCTTCTCCTTACCCATaGAAAGGCCTCGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: KLPKVCSMSQPALGLQANPSPYP*KGLGGS
Trigger: ACTACCACCGAGGCCTTTCCATGGGTAAGGAGAAGG...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538199.5
CDS-3UTR TCA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCCATCTTCTTCTCCTTaGGCTTCATGCCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: SSKLGWVELLSPGMSMASPSSSP*ASCPLL
Trigger: CAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGG...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCTCCAGTCATGCTCATTaGCATTGTCCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: SKLGWVELLSPGMSMASLSSHAH*HCPGTP
Trigger: AGGAGTACCTGGACAATGTCAATGAGCATGACTGGA...GAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGACGAAAGTGGCATCTTaGACTATGTCCATCATACGG +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVTKVAS*TMSIIR
Trigger: CCGTATGATGGACATAGTTCAAGATGCCACTTTCGT...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp GAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCTATTTGGTGACCACTTaGGGCCTCTTGGTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: EDPKLPKVCSMSQPALGLYLVTT*GLLVCK
Trigger: CTTGCACACCAAGAGGCCTCAAGTGGTCACCAAATA...GAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATTATTTGGTGACCACTTaGGGCCTCTTGGTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KLPKVCSMSQPALGLQANYLVTT*GLLVCK
Trigger: CTTGCACACCAAGAGGCCTCAAGTGGTCACCAAATA...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTGGGTTCCATATTTGGTaGCCACTTGAGGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPGFHIW*PLEASW
Trigger: CCAAGAGGCCTCAAGTGGTCACCAAATATGGAACCC...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GGAAGTTCAGTTGGAGGAATCTCATCTTGTTGGACACACGCATCACCTTGGTCCAGGATGGATGGTAAATaGCAAGCTGGGTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: GSSVGGISSCWTHASPWSRMDGK*QAGCSD
Trigger: GTCACTGCACCCAGCTTGGCATTTACCATCCATCCT...GGACCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCAACTGAACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR GCA 90 bp GTCAACAGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTGGAAAGGGCAGTGCAAACTACCAAAAGTTTaGTCCATGTCACAACCTGCC +
Preference number: 4 (lower is better)
Translates to: VNSEVEGHHGMSGWKGQCKLPKV*SMSQPA
Trigger: GGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT...GCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGAAACTACCAAAAGTTTaGTCCATGTCACAACCTGCC +
Preference number: 4 (lower is better)
Translates to: VCSMSQPALGLQANVNRQKLPKV*SMSQPA
Trigger: GGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT...CTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCATCAGTCCTGAGATaGTCATGGCCCCCGCCGACT +
Preference number: 4 (lower is better)
Translates to: SASQVFETGTDSSKKPSSSSVLR*SWPPPT
Trigger: AGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGA...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp CAGTCTGCAGTGTGGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACGTGTGCTGTTGTGGTTaGATCCAGCCAGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: QSAVWHTRKWHLELCPSYVCCCG*IQPGGQ
Trigger: TTGCCCACCTGGCTGGATGCAACCACAACAGCACAC...GTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR GCA 90 bp CCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTGTGTGCTGTTGTGGTTaGATCCAGCCAGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: PLLLRSLRLVQTHPKSHLVCCCG*IQPGGQ
Trigger: TTGCCCACCTGGCTGGATGCAACCACAACAGCACAC...AAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp TTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATGTGTGCTGTTGTGGTTaGATCCAGCCAGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LPLLLRSLRLVQTHPKSHVCCCG*IQPGGQ
Trigger: TTGCCCACCTGGCTGGATGCAACCACAACAGCACAC...ATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp CAGTCTGCAGTGTGGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACATCCTTGTTGTAGCGTaGCCAGCAGGGCAGATTCCC +
Preference number: 4 (lower is better)
Translates to: QSAVWHTRKWHLELCPSYILVVA*PAGQIP
Trigger: GGGAATCTGCCCTGCTGGCCACGCTACAACAAGGAT...GTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp AACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: NPSLAPSCIATLRIASASSSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...AGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTGGAGACATTGAAGGGTaGGAGGATTTGAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: CSSKLGWVELLSPGMSMAGDIEG*EDLKKG
Trigger: TCCCTTCTTCAAATCCTCCCACCCTTCAATGTCTCC...AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTCTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPLLHHK*YLLLGD
Trigger: ATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAG...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GTCAACAGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTGGAAAGGGCAGTGCTGGCATACACGAAAGTaGCATCTTGAACTATGTCCA +
Preference number: 4 (lower is better)
Translates to: VNSEVEGHHGMSGWKGQCWHTRK*HLELCP
Trigger: TGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA...GCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACTGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCTGGCATACACGAAAGTaGCATCTTGAACTATGTCCA +
Preference number: 4 (lower is better)
Translates to: KLGWVELLSPGMSMASLPWHTRK*HLELCP
Trigger: TGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TCCTTGAGCTTCATGCCCACTCTTGTGGTAAAATCCAGCTGCAGGTACTTTTCATTGCATCCAGCCAGGTaGGCAACCTTCTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: SLSFMPTLVVKSSCRYFSLHPAR*ATFLAT
Trigger: AGTGGCCAAGAAGGTTGCCCACCTGGCTGGATGCAA...TGAAAAGTACCTGCAGCTGGATTTTACCACAAGAGTGGGCATGAAGCTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp CCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTTTGCATCCAGCCAGGTaGGCAACCTTCTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: PLLLRSLRLVQTHPKSHLLHPAR*ATFLAT
Trigger: AGTGGCCAAGAAGGTTGCCCACCTGGCTGGATGCAA...AAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTACACACGCATCACCTTaGTCCCTGATAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPTHASP*SLIVPS
Trigger: TGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGT...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTGGAATCTCATCTTGTTaGACACACGCATCACCTTGG +
Preference number: 4 (lower is better)
Translates to: NPSLAPSCIATLRIASASGISSC*THASPW
Trigger: CCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCC...AGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCGGAATCTCATCTTGTTaGACACACGCATCACCTTGG +
Preference number: 4 (lower is better)
Translates to: SKLGWVELLSPGMSMASLGISSC*THASPW
Trigger: CCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCC...GAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTTACCTAGAGGAGGTCTaGAGAAGGGGACTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCYLEEV*RRGLLK
Trigger: TTTTAGGAGTCCCCTTCTCCAGACCTCCTCTAGGTA...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTTGGCAACACTGTGGATaGCAACACTGTGGATGGCAT +
Preference number: 4 (lower is better)
Translates to: LAPSCIATLRIASASQVFWQHCG*QHCGWH
Trigger: ATGCCATCCACAGTGTTGCCATCCACAGTGTTGCCA...AAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540947.6
CDS-3UTR CCA 90 bp CTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCTCCCACTTGAGGCCTCTTaGTGTGCAAGGCACCCAAGG +
Preference number: 4 (lower is better)
Translates to: LLRSLRLVQTHPKSHLLLPLEAS*CARHPR
Trigger: CCTTGGGTGCCTTGCACACCAAGAGGCCTCAAGTGG...GAGAAGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540947.6
CDS-3UTR TCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAACTGGATGTCAACAGTaGAGTAGAGGGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: GREDPKLPKVCSMSQPALTGCQQ*SRGASW
Trigger: CCATGATGCCCCTCTACTTCACTGTTGACATCCAGT...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTGTCACAAGGAGACATTaGAGGGTGGGAGGATTTGAA +
Preference number: 4 (lower is better)
Translates to: SSKLGWVELLSPGMSMASVTRRH*RVGGFE
Trigger: TTCAAATCCTCCCACCCTTCAATGTCTCCTTGTGAC...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTAGACAGGCACAAGGTTaGGCAGGATGGATGGTAAAT +
Preference number: 4 (lower is better)
Translates to: LAPSCIATLRIASASQVFRQAQG*AGWMVN
Trigger: ATTTACCATCCATCCTGCTCAACCTTGTGCCTGTCT...AAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000567587.6
CDS-3UTR TCA 90 bp TTCTTGGCCACTTTCAGTGGGTTACTAGTGATGAAAAGTCTGAATAACGCGGTGAAGGTAGGGCACAGATaGAACCTTCCCCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: FLATFSGLLVMKSLNNAVKVGHR*NLPLGQ
Trigger: CTGACCCAGGGGAAGGTTTCATCTGTGCCCTACCTT...CACCGCGTTATTCAGACTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR TCA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTAAGGTAGGGCACAGATaGAACCTTCCCCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SASQVFETGTDSSKKPSSKVGHR*NLPLGQ
Trigger: CTGACCCAGGGGAAGGTTTCATCTGTGCCCTACCTT...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTAGGATGGATGGTAAATaGCAAGCTGGGTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPRMDGK*QAGCSD
Trigger: GTCACTGCACCCAGCTTGGCATTTACCATCCATCCT...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAAACTACCAAAAGTTTaGTCCATGTCACAACCTGCC +
Preference number: 4 (lower is better)
Translates to: LPKVCSMSQPALGLQANVKLPKV*SMSQPA
Trigger: GGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TCCAGGTACTCCTCCACCACAAGTGGTACCTGCTCCTTGGTGATATTCAACAGGAGCATCTTCCAGTCATaGTCATTGACATTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRYSSTTSGTCSLVIFNRSIFQS*SLTLSR
Trigger: CCTGGACAATGTCAATGAGCATGACTGGAAGATGCT...CCTGTTGAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR GCA 90 bp ACTTTTCATCCTTGTTGTAGCGTGGCCAGCAGGGCAGATTCCCATCATTGGGGTAGCATCTTCCAGTCATaGTCATTGACATTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TFHPCCSVASRADSHHWGSIFQS*SLTLSR
Trigger: CCTGGACAATGTCAATGAGCATGACTGGAAGATGCT...ACCCCAATGATGGGAATCTGCCCTGCTGGCCACGCTACAACAAGGATGAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR GCA 90 bp AGAATTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACC +
Preference number: 4 (lower is better)
Translates to: RIASASQVFETGTDSSKKKMPSL*CRNTST
Trigger: GGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTT...CTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp CCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTTCCTTTCTCATCGCCTaGCGGTTTAGCGGGAACTTC +
Preference number: 4 (lower is better)
Translates to: PLLLRSLRLVQTHPKSHLSFLIA*RFSGNF
Trigger: GAAGTTCCCGCTAAACCGGCAGGCGATGAGAAAGGA...AAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
CDS-3UTR GCA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTACCACAAGTGGTACCTaGTCCTTGGTGATATTCAAC +
Preference number: 4 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCTTSGT*SLVIFN
Trigger: GTTGAATATCACCAAGGAGCAGGTACCACTTGTGGT...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCATCTGGAGGCTAAGTaGCTTCTCCTTACCCATGGA +
Preference number: 4 (lower is better)
Translates to: ERRSQTTKSLLHVTTCPRHLEAK*LLLTHG
Trigger: TCCATGGGTAAGGAGAAGGCACTTAGCCTCCAGATG...CCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGAAGTTCAGTTGGAGGAATCTCATCTTGTTGGACACACGCATCACCTTGGTCCAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GSSVGGISSCWTHASPWSSSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...GGACCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCAACTGAACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp CAGTCTGCAGTGTGGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACAGTAGAGGGGCATCATaGGATGTCAGGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QSAVWHTRKWHLELCPSYSRGAS*DVRLER
Trigger: CCTTTCCAGCCTGACATCCCATGATGCCCCTCTACT...GTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp CAGTCTGCAGTGTGGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACGGTGTTGACAGGGCCTaGCCTAACTGGATGTCAACA +
Preference number: 4 (lower is better)
Translates to: QSAVWHTRKWHLELCPSYGVDRA*PNWMST
Trigger: TGTTGACATCCAGTTAGGCCAGGCCCTGTCAACACC...GTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp ACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCACTCTTGTGGTGGTGTTGACAGGGCCTaGCCTAACTGGATGTCAACA +
Preference number: 4 (lower is better)
Translates to: THPKSHLLLLELHAHSCGGVDRA*PNWMST
Trigger: TGTTGACATCCAGTTAGGCCAGGCCCTGTCAACACC...ACCACAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp ACTCATCCAAAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCACTCTTGTGGTCTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: THPKSHLLLLELHAHSCGLLHHK*YLLLGD
Trigger: ATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAG...ACCACAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTTTGGATGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp TGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTGAGCAGTCTGCAGTGTaGCATACACGAAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: WERRSQTTKSLLHVTTCPEQSAV*HTRKWH
Trigger: ATGCCACTTTCGTGTATGCCACACTGCAGACTGCTC...AGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTTACATCGAGGCCAGCTaGCCCCAGGACTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SGLINTSLLKRPPLCIDFYIEAS*PQDSCR
Trigger: CCTGCAGGAGTCCTGGGGCCAGCTGGCCTCGATGTA...AAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGCTTGGCCACTTTCAGTaGGTTACTAGTGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: PSLAPSCIATLRIASASQLGHFQ*VTSDEK
Trigger: CTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAG...CTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp CCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTACACACGCATCACCTTaGTCCCTGATAGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PLLLRSLRLVQTHPKSHLTHASP*SLIVPS
Trigger: TGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGT...AAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAGGAATCTCATCTTGTTaGACACACGCATCACCTTGG +
Preference number: 4 (lower is better)
Translates to: LLKRPPLCIDFGVALGEIGISSC*THASPW
Trigger: CCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCC...TATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATTCTTCCGGGTCTCTCTaGAAGTTCAGTTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: KLPKVCSMSQPALGLQANSSGSL*KFSWRN
Trigger: ATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGA...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGAATTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGGATGAAACCTTCCCCTaGGTCAGGAGCACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: RIASASQVFETGTDSSKKDETFP*VRSTKG
Trigger: CCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATC...CTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTGATGAAACCTTCCCCTaGGTCAGGAGCACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SASQVFETGTDSSKKPSSDETFP*VRSTKG
Trigger: CCCTTTGGTGCTCCTGACCCAGGGGAAGGTTTCATC...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTTACCTAGAGGAGGTCTaGAGAAGGGGACTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: SSKLGWVELLSPGMSMASYLEEV*RRGLLK
Trigger: TTTTAGGAGTCCCCTTCTCCAGACCTCCTCTAGGTA...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATTGGCAACACTGTGGATaGCATGGTAGCCGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: LPLLLRSLRLVQTHPKSHWQHCG*HGSRVY
Trigger: GTAGACACGGCTACCATGCCATCCACAGTGTTGCCA...ATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540947.6
CDS-3UTR TCA 90 bp GAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGTCCAGTCATGCTCATTaGCATTGTCCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: ERRSQTTKSLLHVTTCPRSSHAH*HCPGTP
Trigger: AGGAGTACCTGGACAATGTCAATGAGCATGACTGGA...CCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AGAAATTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAACCGTTCCCGCGTGCTaGCGTACATCGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RNSGLINTSLLKRPPLCITVPAC*RTSRPA
Trigger: AGCTGGCCTCGATGTACGTCAGCACGCGGGAACGGT...TATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTGGGTTCCATATTTGGTaGCCACTTGAGGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SASQVFETGTDSSKKPSSGFHIW*PLEASW
Trigger: CCAAGAGGCCTCAAGTGGTCACCAAATATGGAACCC...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGGCTGGAAAGGGCAGTaGAGGTCCCACACAACAGGC +
Preference number: 4 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSGWKGQ*RSHTTG
Trigger: GCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTATTACCAGGATCTGTGTaGTGTTGTGGTTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: GREDPKLPKVCSMSQPALLPGSV*CCGCIQ
Trigger: CTGGATGCAACCACAACAGCACACAGATCCTGGTAA...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCACTCTTGTGGTAAAATCCAGTCCTTTCTCATCGCCTaGCGGTTTAGCGGGAACTTC +
Preference number: 4 (lower is better)
Translates to: KSHLLLLELHAHSCGKIQSFLIA*RFSGNF
Trigger: GAAGTTCCCGCTAAACCGGCAGGCGATGAGAAAGGA...CTGGATTTTACCACAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR CCA 90 bp TGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTATTATTCCACGAGCGTaGTGCTCAAATTCATACAGG +
Preference number: 4 (lower is better)
Translates to: CSSKLGWVELLSPGMSMAIIPRA*CSNSYR
Trigger: CCTGTATGAATTTGAGCACCACGCTCGTGGAATAAT...AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ERRSQTTKSLLHVTTCPRSSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...CCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAAGTTCTAAACTGGGGTaGGTAGAACTCTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GREDPKLPKVCSMSQPALSSKLG*VELLSP
Trigger: TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGGGAGACATTGAAGGGTaGGAGGATTTGAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ERRSQTTKSLLHVTTCPRGDIEG*EDLKKG
Trigger: TCCCTTCTTCAAATCCTCCCACCCTTCAATGTCTCC...CCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAATTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCGAGCAGTCTGCAGTGTaGCATACACGAAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: ELPLLLRSLRLVQTHPKSEQSAV*HTRKWH
Trigger: ATGCCACTTTCGTGTATGCCACACTGCAGACTGCTC...GCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTCTTGGCCACTTTCAGTaGGTTACTAGTGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCLGHFQ*VTSDEK
Trigger: CTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAG...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GATAGTGCCCTCAGGCAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCACTTGGCCACTTTCAGTaGGTTACTAGTGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: DSALRQFTRICVLLWLHPLGHFQ*VTSDEK
Trigger: CTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAG...TGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCTGAGGGCACTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CCA 90 bp TGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTCTTGGCCACTTTCAGTaGGTTACTAGTGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: CSSKLGWVELLSPGMSMALGHFQ*VTSDEK
Trigger: CTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAG...AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTATCTGTGTGCTGTTGTaGTTGCATCCAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SASQVFETGTDSSKKPSSICVLL*LHPARW
Trigger: CCACCTGGCTGGATGCAACCACAACAGCACACAGAT...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTGGAATCTCATCTTGTTaGACACACGCATCACCTTGG +
Preference number: 4 (lower is better)
Translates to: WERRSQTTKSLLHVTTCPGISSC*THASPW
Trigger: CCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCC...AGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTATCTTCCGGGTCTCTCTaGAAGTTCAGTTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GREDPKLPKVCSMSQPALSSGSL*KFSWRN
Trigger: ATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGA...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTCACCAAAGGGTCATCTaGGATCACCACACCATCCAC +
Preference number: 4 (lower is better)
Translates to: SASQVFETGTDSSKKPSSHQRVI*DHHTIH
Trigger: GTGGATGGTGTGGTGATCCCAGATGACCCTTTGGTG...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR TCA 90 bp AAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCACTCTTGTGGTAAAATCCAGACTGGATGTCAACAGTaGAGTAGAGGGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: KSHLLLLELHAHSCGKIQTGCQQ*SRGASW
Trigger: CCATGATGCCCCTCTACTTCACTGTTGACATCCAGT...CTGGATTTTACCACAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR TCA 90 bp TCCTTGAGCTTCATGCCCACTCTTGTGGTAAAATCCAGCTGCAGGTACTTTTCAAGACAGGCACAAGGTTaGGCAGGATGGATGGTAAAT +
Preference number: 4 (lower is better)
Translates to: SLSFMPTLVVKSSCRYFSRQAQG*AGWMVN
Trigger: ATTTACCATCCATCCTGCTCAACCTTGTGCCTGTCT...TGAAAAGTACCTGCAGCTGGATTTTACCACAAGAGTGGGCATGAAGCTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR TCA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTACAGACAGTCCTCGCTaGAGCGCAGCCACTTGTACC +
Preference number: 4 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSTDSPR*SAATCT
Trigger: GGTACAAGTGGCTGCGCTTCAGCGAGGACTGTCTGT...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTTGCTGTGGGCAGGAGTaGTGGCAACACTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: SGLINTSLLKRPPLCIDFCCGQE*WQHCGW
Trigger: CCATCCACAGTGTTGCCATCACTCCTGCCCACAGCA...AAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AGTGCGGGGTTTGACGATTATTCCACGAGCGTGGTGCTCAAATTCATACAGGTATCTTTGGCTCCTTCCTaGATAGCCACCCTTAGAATT +
Preference number: 4 (lower is better)
Translates to: SAGFDDYSTSVVLKFIQVSLAPS*IATLRI
Trigger: AATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGA...TACCTGTATGAATTTGAGCACCACGCTCGTGGAATAATCGTCAAACCCCGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR GCA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTTCTTTGGCTCCTTCCTaGATAGCCACCCTTAGAATT +
Preference number: 4 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPSLAPS*IATLRI
Trigger: AATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGA...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTGCAGCAGGGAGCTCCTaGAGTTCTAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FRSNQHFFIEETTPVYRLAAGSS*SSKLGW
Trigger: CCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC...AAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGCAGCAGGGAGCTCCTaGAGTTCTAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGLINTSLLKRPPLCIDFAAGSS*SSKLGW
Trigger: CCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC...AAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AAAAGCCATCTTCTTCTCCTTGAGCTTCATGCCCACTCTTGTGGTAAAATCCAGAGGATGGATGGTAAATaGCAAGCTGGGTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: KSHLLLLELHAHSCGKIQRMDGK*QAGCSD
Trigger: GTCACTGCACCCAGCTTGGCATTTACCATCCATCCT...CTGGATTTTACCACAAGAGTGGGCATGAAGCTCAAGGAGAAGAAGATGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR GCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAAGCATCTTCCAGTCATaGTCATTGACATTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GREDPKLPKVCSMSQPALSIFQS*SLTLSR
Trigger: CCTGGACAATGTCAATGAGCATGACTGGAAGATGCT...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTAGCATCTTCCAGTCATaGTCATTGACATTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPSIFQS*SLTLSR
Trigger: CCTGGACAATGTCAATGAGCATGACTGGAAGATGCT...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTTGGCATACACGAAAGTaGCATCTTGAACTATGTCCA +
Preference number: 4 (lower is better)
Translates to: SSKLGWVELLSPGMSMASWHTRK*HLELCP
Trigger: TGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGAAATTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAATGGCCCCCGCCGACTaGCCGAACAGGGTCACATTT +
Preference number: 4 (lower is better)
Translates to: RNSGLINTSLLKRPPLCIMAPAD*PNRVTF
Trigger: AAATGTGACCCTGTTCGGCCAGTCGGCGGGGGCCAT...TATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATTCTTCCGGGTCTCTCTaGAAGTTCAGTTGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LPLLLRSLRLVQTHPKSHSSGSL*KFSWRN
Trigger: ATTCCTCCAACTGAACTTCCAGAGAGACCCGGAAGA...ATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTCTAAAAAGACTTGGATaGGTGTCTTCCCCACATGCA +
Preference number: 4 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPLKRLG*VSSPHA
Trigger: TGCATGTGGGGAAGACACCCATCCAAGTCTTTTTAG...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000538199.5
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GAATTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCTACCTAGAGGAGGTCTaGAGAAGGGGACTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: ELPLLLRSLRLVQTHPKSYLEEV*RRGLLK
Trigger: TTTTAGGAGTCCCCTTCTCCAGACCTCCTCTAGGTA...GCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000567587.6
CDS-3UTR TCA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTTCAACACTTCTTTATTaGAGAGACCACCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPSTLLY*RDHPCV
Trigger: TACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGA...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp AGAAATTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATATGCTGTGGGCAGGAGTaGTGGCAACACTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: RNSGLINTSLLKRPPLCICCGQE*WQHCGW
Trigger: CCATCCACAGTGTTGCCATCACTCCTGCCCACAGCA...TATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR GCA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAAAACTACCAAAAGTTTaGTCCATGTCACAACCTGCC +
Preference number: 4 (lower is better)
Translates to: GREDPKLPKVCSMSQPALKLPKV*SMSQPA
Trigger: GGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATAGCATCTTCCAGTCATaGTCATTGACATTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPLLLRSLRLVQTHPKSHSIFQS*SLTLSR
Trigger: CCTGGACAATGTCAATGAGCATGACTGGAAGATGCT...ATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp AGAAATTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATATCATCAGTCCTGAGATaGTCATGGCCCCCGCCGACT +
Preference number: 4 (lower is better)
Translates to: RNSGLINTSLLKRPPLCISSVLR*SWPPPT
Trigger: AGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGA...TATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AGAATTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGTTACCAGGATCTGTGTaGTGTTGTGGTTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: RIASASQVFETGTDSSKKLPGSV*CCGCIQ
Trigger: CTGGATGCAACCACAACAGCACACAGATCCTGGTAA...CTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTATTATTCCACGAGCGTaGTGCTCAAATTCATACAGG +
Preference number: 4 (lower is better)
Translates to: WERRSQTTKSLLHVTTCPIIPRA*CSNSYR
Trigger: CCTGTATGAATTTGAGCACCACGCTCGTGGAATAAT...AGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTCTTGGCCACTTTCAGTaGGTTACTAGTGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPLGHFQ*VTSDEK
Trigger: CTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAG...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR GCA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCTTTGGCTCCTTCCTaGATAGCCACCCTTAGAATT +
Preference number: 4 (lower is better)
Translates to: SASQVFETGTDSSKKPSSSLAPS*IATLRI
Trigger: AATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGA...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTTCCTTTCTCATCGCCTaGCGGTTTAGCGGGAACTTC +
Preference number: 4 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSSFLIA*RFSGNF
Trigger: GAAGTTCCCGCTAAACCGGCAGGCGATGAGAAAGGA...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp AGAAATTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAATCCTTGTTGTAGCGTaGCCAGCAGGGCAGATTCCC +
Preference number: 4 (lower is better)
Translates to: RNSGLINTSLLKRPPLCIILVVA*PAGQIP
Trigger: GGGAATCTGCCCTGCTGGCCACGCTACAACAAGGAT...TATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGCAGATTCCCATCATTaGGGTTTCCTGTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: SGLINTSLLKRPPLCIDFADSHH*GFLCGQ
Trigger: TTGCCCGCACAGGAAACCCCAATGATGGGAATCTGC...AAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCAACACTTCTTTATTaGAGAGACCACCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SASQVFETGTDSSKKPSSSTLLY*RDHPCV
Trigger: TACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGA...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp AGAATTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGGTGGTAAAATCCAGCTaGAGGTACTTTTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: RIASASQVFETGTDSSKKVVKSS*RYFSSL
Trigger: CAAGGATGAAAAGTACCTGCAGCTGGATTTTACCAC...CTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR GCA 90 bp TCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTCATCTGGAGGCTAAGTaGCTTCTCCTTACCCATGGA +
Preference number: 4 (lower is better)
Translates to: SGLINTSLLKRPPLCIDFHLEAK*LLLTHG
Trigger: TCCATGGGTAAGGAGAAGGCACTTAGCCTCCAGATG...AAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CCA 90 bp CTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCTCTGGCATACACGAAAGTaGCATCTTGAACTATGTCCA +
Preference number: 4 (lower is better)
Translates to: LLRSLRLVQTHPKSHLLLWHTRK*HLELCP
Trigger: TGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA...GAGAAGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTTGGCATACACGAAAGTaGCATCTTGAACTATGTCCA +
Preference number: 4 (lower is better)
Translates to: SASQVFETGTDSSKKPSSWHTRK*HLELCP
Trigger: TGGACATAGTTCAAGATGCCACTTTCGTGTATGCCA...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CCA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGTGATGGCAACACTGTaGATGGCAACACTGTGGATG +
Preference number: 4 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSVMATL*MATLWM
Trigger: CATCCACAGTGTTGCCATCCACAGTGTTGCCATCAC...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
3UTR CAA 72 bp AGGTGGAGAAATTCAGGTCTAATCAACACTTCTTTATaGAAGAGACCACCCCTGTGTATAGACTTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RWRNSGLINTSL*KRPPLCIDFGV
Trigger: CACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAATTTCTCCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTACGAAAGTGGCATCTTaGACTATGTCCATCATACGG +
Preference number: 4 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSTKVAS*TMSIIR
Trigger: CCGTATGATGGACATAGTTCAAGATGCCACTTTCGT...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR TCA 90 bp TCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTACGAAAGTGGCATCTTaGACTATGTCCATCATACGG +
Preference number: 4 (lower is better)
Translates to: SGLINTSLLKRPPLCIDFTKVAS*TMSIIR
Trigger: CCGTATGATGGACATAGTTCAAGATGCCACTTTCGT...AAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR GCA 90 bp AGAAATTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAACCACAAGTGGTACCTaGTCCTTGGTGATATTCAAC +
Preference number: 4 (lower is better)
Translates to: RNSGLINTSLLKRPPLCITTSGT*SLVIFN
Trigger: GTTGAATATCACCAAGGAGCAGGTACCACTTGTGGT...TATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CCA 90 bp TCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTCTTGGCCACTTTCAGTaGGTTACTAGTGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: SGLINTSLLKRPPLCIDFLGHFQ*VTSDEK
Trigger: CTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAG...AAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS GCA 90 bp CGCGTGGCTGTCGTCCGTGCCAGTCCCCGCCGCTCTGGCCACAGCTaGGGTCCCAAAGGGTACCGGCCCCGCCACCTCAGGAAGCCGAAG +
Preference number: 5 (lower is better)
Translates to: RVAVVRASPRRSGHS*GPKGYRPRHLRKPK
Trigger: CTTCGGCTTCCTGAGGTGGCGGGGCCGGTACCCTTTGGGACCGCAGCTGTGGCCAGAGCGGCGGGGACTGGCACGGACGACAGCCACGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS GCA 90 bp CGTGGCTGTCGTCCGTGCGGCCCCGCCACCTCAGGAAGCCGAAGATaGCGAGCCTGTGCTGCAGAAACACCAGCACCACTTTCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: RGCRPCGPATSGSRR*RACAAETPAPLSRG
Trigger: CCCGCGAGAAAGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGGTGGCGGGGCCGCACGGACGACAGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535696.1
CDS TCA 90 bp GGGCGGCCAAGTCAGAGCCCTCGTACGAAGAAGCAGCGCCCACGATaGAGGCGCCTCCCGGGAACCAGACCATCACTGGCAGCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: GRPSQSPRTKKQRPR*RRLPGTRPSLAAGD
Trigger: ATCCCCAGCTGCCAGTGATGGTCTGGTTCCCGGGAGGCGCCTTCATCGTGGGCGCTGCTTCTTCGTACGAGGGCTCTGACTTGGCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000543561.1
ENST00000648724.2
CDS TCA 90 bp GGGCGGCCAAGTCAGAGCCCTCGTACGAAGAAGCAGCGCCCACGATaGAGGCGCCTCCCGGGAACCAGACCATCACTCACTGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRPSQSPRTKKQRPR*RRLPGTRPSLTGSW
Trigger: CCAGCTGCCAGTGAGTGATGGTCTGGTTCCCGGGAGGCGCCTTCATCGTGGGCGCTGCTTCTTCGTACGAGGGCTCTGACTTGGCCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS GCA 90 bp GGGTACCGGCCCCGCCACCTCAGGAAGCCGAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACCACTTTCTCGCGGGCGGCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: GYRPRHLRKPKMPSL*CRNTSTTFSRAAKS
Trigger: TGACTTGGCCGCCCGCGAGAAAGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGGTGGCGGGGCCGGTACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS GCA 90 bp GCGGTCCCAAAGGGTACCGGCCCCGCCACCTCAGGAAGCCGAAGATaGCGAGCCTGTGCTGCAGAAACACCAGCACCACTTTCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: AVPKGTGPATSGSRR*RACAAETPAPLSRG
Trigger: CCCGCGAGAAAGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGGTGGCGGGGCCGGTACCCTTTGGGACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS GCA 90 bp TCCGTGCGGCCCCGCCACCTCAGGAAGCCGAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACCACTTTCTCGCGGGCGGCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: SVRPRHLRKPKMPSL*CRNTSTTFSRAAKS
Trigger: TGACTTGGCCGCCCGCGAGAAAGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGGTGGCGGGGCCGCACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535696.1
CDS CCA 90 bp GGAGGGGTGGGTCTGCATCCAGAGGTGGGAGACTGGACACCCAGTTaGGGTATCAGGTGGGACCTTTGCACCTGTGGCGAAGGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: GGVGLHPEVGDWTPS*GIRWDLCTCGEGAP
Trigger: GGGGGCCCCTTCGCCACAGGTGCAAAGGTCCCACCTGATACCCCAACTGGGTGTCCAGTCTCCCACCTCTGGATGCAGACCCACCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544986.1
CDS TCA 90 bp TGGTGTGCAAGGCACCCAAGGCCGTCTGCGCCATCAGGCAGAGGGTaGGGCTCCAGCACAGAATCCACCTCATGCTCCAGCCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: WCARHPRPSAPSGRG*GSSTESTSCSSQLL
Trigger: CAGGAGCTGGCTGGAGCATGAGGTGGATTCTGTGCTGGAGCCTCACCCTCTGCCTGATGGCGCAGACGGCCTTGGGTGCCTTGCACACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS GCA 90 bp GCGTGGCTGTCGTCCGTGCTCAGGAAGCCGAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACCACTTTCTCGCGGGCGGCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: AWLSSVLRKPKMPSL*CRNTSTTFSRAAKS
Trigger: TGACTTGGCCGCCCGCGAGAAAGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGCACGGACGACAGCCACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000543561.1
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GAGGCTAGGGGTGACATCATCAGTCCTGAGATGCTCATGGCCCCCGCCGACTGGCTGAAGCGCAGCCACTaGTACCGTTCCCGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: EARGDIISPEMLMAPADWLKRSH*YRSRVL
Trigger: CAGCACGCGGGAACGGTACAAGTGGCTGCGCTTCAG...CCAGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGATGTCACCCCTAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CAA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCGCAAAAGCTCTAGCTTaGGCCTGGAGGCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAAKALA*AWRQQG
Trigger: TCCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGC...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCGGCAGATTCCCATCATaGGGGTTTCCTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAGRFPS*GFPVRA
Trigger: TGCCCGCACAGGAAACCCCAATGATGGGAATCTGCC...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CAA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCGGGTGGGTAGAACTCTaGTCCCCAGGTATGTCCATG +
Preference number: 5 (lower is better)
Translates to: PGMSMASLPRAWMVGANPGWVEL*SPGMSM
Trigger: CATGGACATACCTGGGGACAAGAGTTCTACCCACCC...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGCTGAAGCGCAGCCACTaGTACCGTTCCCGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGLKRSH*YRSRVL
Trigger: CAGCACGCGGGAACGGTACAAGTGGCTGCGCTTCAG...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCTGTGTGCTGTTGTGGTaGCATCCAGCCAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: RAWMVGANPSLAPSCIATCVLLW*HPARWA
Trigger: TGCCCACCTGGCTGGATGCAACCACAACAGCACACA...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCGACACACGCATCACCTaGGTCCCTGATAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: RAWMVGANPSLAPSCIATDTRIT*VPDSAL
Trigger: GAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTC...GGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGGGGGCAAACCCCTCTTaGGCTCCTTCCTGCATAGCC +
Preference number: 5 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGGANPS*APSCIA
Trigger: GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCCTGAAGCGCAGCCACTaGTACCGTTCCCGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGLKRSH*YRSRVL
Trigger: CAGCACGCGGGAACGGTACAAGTGGCTGCGCTTCAG...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCCTGAAGCGCAGCCACTaGTACCGTTCCCGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: AGKGSAGPTQQAKALALALKRSH*YRSRVL
Trigger: CAGCACGCGGGAACGGTACAAGTGGCTGCGCTTCAG...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCAGGTGGGCAACCTTCTaGGCCACTTTCAGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: PGMSMASLPRAWMVGANPRWATF*ATFSGL
Trigger: TAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACCT...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TCCGTGCTCAGGAAGCCGAAGATGCCGAGCCTGTGCTGCAGAAACACCAGCACCGACACACGCATCACCTaGGTCCCTGATAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: SVLRKPKMPSLCCRNTSTDTRIT*VPDSAL
Trigger: GAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTC...GGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGCACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS CCA 90 bp GGCTCCAGCACAGAATCCACCTCATGCTCCAGCCAGCTCCTGCTGTaGGCAGGAGTGATGGCAACACTGTGGATGGCAACACTGTGGATG +
Preference number: 5 (lower is better)
Translates to: GSSTESTSCSSQLLL*AGVMATLWMATLWM
Trigger: CATCCACAGTGTTGCCATCCACAGTGTTGCCATCACTCCTGCCCACAGCAGGAGCTGGCTGGAGCATGAGGTGGATTCTGTGCTGGAGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS CCA 90 bp GAGCATAACAGATTAGGAACTGGTGAGCTCCCTGTGGCCAGCCAATaGAGGGGTGGGTCTGCATCCAGAGGTGGGAGACTGGACACCCAG +
Preference number: 5 (lower is better)
Translates to: EHNRLGTGELPVASQ*RGGSASRGGRLDTQ
Trigger: CTGGGTGTCCAGTCTCCCACCTCTGGATGCAGACCCACCCCTCCATTGGCTGGCCACAGGGAGCTCACCAGTTCCTAATCTGTTATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544478.1
ENST00000544986.1
CDS-3UTR CAA 90 bp GGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCGGGGCAAACCCCTCTTaGGCTCCTTCCTGCATAGCC +
Preference number: 5 (lower is better)
Translates to: GWKGQCRSHTTGKSSSFGGANPS*APSCIA
Trigger: GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC...GCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGAGCACAGTGTGGTGTaGACAGGGCCTGGCCTAACT +
Preference number: 5 (lower is better)
Translates to: ELLSPGMSMASLPRAWMVEHSVV*TGPGLT
Trigger: AGTTAGGCCAGGCCCTGTCAACACCACACTGTGCTC...CACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGGAGCACAGTGTGGTGTaGACAGGGCCTGGCCTAACT +
Preference number: 5 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGEHSVV*TGPGLT
Trigger: AGTTAGGCCAGGCCCTGTCAACACCACACTGTGCTC...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GTCAACAGTGAAGTAGAGGGGCATCATGGGATGTCAGGCTGGAAAGGGCAGTGCCTGAAGCGCAGCCACTaGTACCGTTCCCGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: VNSEVEGHHGMSGWKGQCLKRSH*YRSRVL
Trigger: CAGCACGCGGGAACGGTACAAGTGGCTGCGCTTCAG...GCACTGCCCTTTCCAGCCTGACATCCCATGATGCCCCTCTACTTCACTGTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCCTGAAGCGCAGCCACTaGTACCGTTCCCGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: KLGWVELLSPGMSMASLPLKRSH*YRSRVL
Trigger: CAGCACGCGGGAACGGTACAAGTGGCTGCGCTTCAG...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCTGGAGGAATCTCATCTaGTTGGACACACGCATCACC +
Preference number: 5 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAWRNLI*LDTRIT
Trigger: GGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCA...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp CCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGGCAAACCCCTGGAGGAATCTCATCTaGTTGGACACACGCATCACC +
Preference number: 5 (lower is better)
Translates to: PGMSMASLPRAWMVGANPWRNLI*LDTRIT
Trigger: GGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCA...GGGGTTTGCCCCCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCAGTGGTACCTGCTCCTaGGTGATATTCAACAGGGTG +
Preference number: 5 (lower is better)
Translates to: PRAWMVGANPSLAPSCIASGTCS*VIFNRV
Trigger: CACCCTGTTGAATATCACCAAGGAGCAGGTACCACT...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGGGCAGATTCCCATCATaGGGGTTTCCTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: NSCPQVCPWLVSPGPGWWGRFPS*GFPVRA
Trigger: TGCCCGCACAGGAAACCCCAATGATGGGAATCTGCC...CCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000648724.2
CDS TCA 90 bp AGGTACTCCTCCACCACAAGTGGTACCTGCTCCTTGGTGATATTCTaGGTGAGGAGGCCACACTTACCTGAGGCCTGGGTGCCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: RYSSTTSGTCSLVIF*VRRPHLPEAWVPAG
Trigger: CCCAGCTGGCACCCAGGCCTCAGGTAAGTGTGGCCTCCTCACTCAGAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535948.1
ENST00000543561.1
ENST00000544986.1
CDS TCA 90 bp CAGAATCCACCTCATGCTCCAGCCAGCTCCTGCTGTGGGCAGGAGTaGTGGCAACACTGTGGATGGCAACACTGTGGATGGCATGGTAGC +
Preference number: 5 (lower is better)
Translates to: QNPPHAPASSCCGQE*WQHCGWQHCGWHGS
Trigger: GCTACCATGCCATCCACAGTGTTGCCATCCACAGTGTTGCCATCACTCCTGCCCACAGCAGGAGCTGGCTGGAGCATGAGGTGGATTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGGGGCAAACCCCTCTTaGGCTCCTTCCTGCATAGCC +
Preference number: 5 (lower is better)
Translates to: VCSMSQPALGLQANVNRQGANPS*APSCIA
Trigger: GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC...CTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGGGGTGGGTAGAACTCTaGTCCCCAGGTATGTCCATG +
Preference number: 5 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGGWVEL*SPGMSM
Trigger: CATGGACATACCTGGGGACAAGAGTTCTACCCACCC...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGAGCACAGTGTGGTGTaGACAGGGCCTGGCCTAACT +
Preference number: 5 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPEHSVV*TGPGLT
Trigger: AGTTAGGCCAGGCCCTGTCAACACCACACTGTGCTC...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAGACACACGCATCACCTaGGTCCCTGATAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: WMVGANPSLAPSCIATLRDTRIT*VPDSAL
Trigger: GAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTC...TCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAGGCAGATTCCCATCATaGGGGTTTCCTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETGRFPS*GFPVRA
Trigger: TGCCCGCACAGGAAACCCCAATGATGGGAATCTGCC...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000648724.2
CDS GCA 90 bp GGGATTTCGGACAGAGCAGGGGACACTGACCTCCCACCCTACTCCTaGTGCTTCTGCTGCTTCCGGAGCAGAAGACTTTCATTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: GISDRAGDTDLPPYS*CFCCFRSRRLSFGR
Trigger: TCTCCCAAATGAAAGTCTTCTGCTCCGGAAGCAGCAGAAGCAGCAGGAGTAGGGTGGGAGGTCAGTGTCCCCTGCTCTGTCCGAAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544478.1
CDS CCA 90 bp CATCATCTGGAGGCTAAGTGCCTTCTCCTTACCCATGGAAAGGCCTaGGGGCAGAATGGGATGTGGGATTTCGGACAGAGCAGGGGACAC +
Preference number: 5 (lower is better)
Translates to: HHLEAKCLLLTHGKA*GQNGMWDFGQSRGH
Trigger: GTGTCCCCTGCTCTGTCCGAAATCCCACATCCCATTCTGCCCCCAGGCCTTTCCATGGGTAAGGAGAAGGCACTTAGCCTCCAGATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544478.1
CDS-3UTR CAA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGAGGGTGGGTAGAACTCTaGTCCCCAGGTATGTCCATG +
Preference number: 5 (lower is better)
Translates to: PLCIDFGVALGEISVGGRGWVEL*SPGMSM
Trigger: CATGGACATACCTGGGGACAAGAGTTCTACCCACCC...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTGAGCACAGTGTGGTGTaGACAGGGCCTGGCCTAACT +
Preference number: 5 (lower is better)
Translates to: CQAGKGSAGPTQQAKALAEHSVV*TGPGLT
Trigger: AGTTAGGCCAGGCCCTGTCAACACCACACTGTGCTC...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCTGAAGCGCAGCCACTaGTACCGTTCCCGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: NPSLAPSCIATLRIASASLKRSH*YRSRVL
Trigger: CAGCACGCGGGAACGGTACAAGTGGCTGCGCTTCAG...AGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp GAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGAGGTGGGCAACCTTCTaGGCCACTTTCAGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: ELLSPGMSMASLPRAWMVRWATF*ATFSGL
Trigger: TAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACCT...CACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCAGCAGGGAGGTGGGCAACCTTCTaGGCCACTTTCAGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: CRSHTTGKSSSFGLEAAGRWATF*ATFSGL
Trigger: TAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACCT...CCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTGTGTGCTGTTGTGGTaGCATCCAGCCAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: CQAGKGSAGPTQQAKALACVLLW*HPARWA
Trigger: TGCCCACCTGGCTGGATGCAACCACAACAGCACACA...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS GCA 90 bp ATTTCGGACAGAGCAGGGGACACTGACCTCCCACCCTACTCCTGCTaGTTCTGCTGCTTCCGGAGCAGAAGACTTTCATTTGGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: ISDRAGDTDLPPYSC*FCCFRSRRLSFGRA
Trigger: TGCTCTCCCAAATGAAAGTCTTCTGCTCCGGAAGCAGCAGAAGCAGCAGGAGTAGGGTGGGAGGTCAGTGTCCCCTGCTCTGTCCGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544478.1
CDS-3UTR CAA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCCCATCAGTGCGGGGTTaGACGATTATTCCACGAGCG +
Preference number: 5 (lower is better)
Translates to: KLGWVELLSPGMSMASLPPSVRG*TIIPRA
Trigger: CGCTCGTGGAATAATCGTCAAACCCCGCACTGATGG...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTGGGGCAAACCCCTCTTaGGCTCCTTCCTGCATAGCC +
Preference number: 5 (lower is better)
Translates to: CSSKLGWVELLSPGMSMAGANPS*APSCIA
Trigger: GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC...AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCGGCAGATTCCCATCATaGGGGTTTCTCGGTGGTAGT +
Preference number: 5 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGGRFPS*GFLGGS
Trigger: ACTACCACCGAGAAACCCCAATGATGGGAATCTGCC...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp GAGACCACCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGAGGTGGGCAACCTTCTaGGCCACTTTCAGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: ETTPVYRLWSGPGGDKCGRWATF*ATFSGL
Trigger: TAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACCT...CCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGGTGGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp ATCACCACACCATCCACCACAGGGCTCATGGACCAGATAATCTCTTCCGGGTCTGACACACGCATCACCTaGGTCCCTGATAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: ITTPSTTGLMDQIISSGSDTRIT*VPDSAL
Trigger: GAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTC...AGACCCGGAAGAGATTATCTGGTCCATGAGCCCTGTGGTGGATGGTGTGGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CAA 90 bp CCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGACACACGCATCACCTaGGTCCCTGATAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: PSLAPSCIATLRIASASQDTRIT*VPDSAL
Trigger: GAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTC...CTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp CCCAGGGCCTGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCATGCATCTGTTTTCCTaGCAGGGTTCCATATTTGGT +
Preference number: 5 (lower is better)
Translates to: PRAWMVGANPSLAPSCIAMHLFS*QGSIFG
Trigger: ACCAAATATGGAACCCTGCAAGGAAAACAGATGCAT...GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCAGGCCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS TCA 90 bp ACATGCATCTGTTTTCCTTGCAGGGTTCCATATTTGGTGACCACTTaGGGCCTCTTGGTGTGCAAGGCACCCAAGGCCGTCTGCGCCATC +
Preference number: 5 (lower is better)
Translates to: TCICFPCRVPYLVTT*GLLVCKAPKAVCAI
Trigger: GATGGCGCAGACGGCCTTGGGTGCCTTGCACACCAAGAGGCCTCAAGTGGTCACCAAATATGGAACCCTGCAAGGAAAACAGATGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TCATCTTGTTGGACACACGCATCACCTTGGTCCCTGATAGTGCCCTCAGGCAGTGGGTGGGTAGAACTCTaGTCCCCAGGTATGTCCATG +
Preference number: 5 (lower is better)
Translates to: SSCWTHASPWSLIVPSGSGWVEL*SPGMSM
Trigger: CATGGACATACCTGGGGACAAGAGTTCTACCCACCC...ACTGCCTGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTCCAACAAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CAA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGACAGACAGGCACAAGGTaGAGCAGGATGGATGGTAAA +
Preference number: 5 (lower is better)
Translates to: PLCIDFGVALGEISVGGRQTGTR*SRMDGK
Trigger: TTTACCATCCATCCTGCTCAACCTTGTGCCTGTCTG...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCATCATGCTCATTGACATaGTCCAGGTACTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPSCSLT*SRYSST
Trigger: GGTGGAGGAGTACCTGGACAATGTCAATGAGCATGA...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCTCATGCTCATTGACATaGTCCAGGTACTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: GWKGQCRSHTTGKSSSFGSCSLT*SRYSST
Trigger: GGTGGAGGAGTACCTGGACAATGTCAATGAGCATGA...GCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCTGGAGGCATTCCAGTCATGCTCATaGACATTGTCCAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: GQCRSHTTGKSSSFGLEAFQSCS*TLSRYS
Trigger: GGAGTACCTGGACAATGTCAATGAGCATGACTGGAA...TGCCTCCAGGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGGGCAGATTCCCATCATaGGGGTTTCTCGGTGGTAGT +
Preference number: 5 (lower is better)
Translates to: VCSMSQPALGLQANVNRQGRFPS*GFLGGS
Trigger: ACTACCACCGAGAAACCCCAATGATGGGAATCTGCC...CTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp ACTTTTCATCCTTGTTGTAGCGTGGCCAGCAGGGCAGATTCCCATCATTGGGGTTGTGTGCTGTTGTGGTaGCATCCAGCCAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: TFHPCCSVASRADSHHWGCVLLW*HPARWA
Trigger: TGCCCACCTGGCTGGATGCAACCACAACAGCACACA...ACCCCAATGATGGGAATCTGCCCTGCTGGCCACGCTACAACAAGGATGAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CAA 90 bp AACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTTGTGTGCTGTTGTGGTaGCATCCAGCCAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: NPSLAPSCIATLRIASASCVLLW*HPARWA
Trigger: TGCCCACCTGGCTGGATGCAACCACAACAGCACACA...AGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGACACACGCATCACCTaGGTCCCTGATAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCDTRIT*VPDSAL
Trigger: GAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTC...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAAGTGGTACCTGCTCCTaGGTGATATTCAACAGGGTG +
Preference number: 5 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPSGTCS*VIFNRV
Trigger: CACCCTGTTGAATATCACCAAGGAGCAGGTACCACT...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS TCA 90 bp TCTTCCCCACATGCATCTGTTTTCCTTGCAGGGTTCCATATTTGGTaGCCACTTGAGGCCTCTTGGTGTGCAAGGCACCCAAGGCCGTCT +
Preference number: 5 (lower is better)
Translates to: SSPHASVFLAGFHIW*PLEASWCARHPRPS
Trigger: AGACGGCCTTGGGTGCCTTGCACACCAAGAGGCCTCAAGTGGTCACCAAATATGGAACCCTGCAAGGAAAACAGATGCATGTGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTCCATCAGTGCGGGGTTaGACGATTATTCCACGAGCG +
Preference number: 5 (lower is better)
Translates to: CSSKLGWVELLSPGMSMAPSVRG*TIIPRA
Trigger: CGCTCGTGGAATAATCGTCAAACCCCGCACTGATGG...AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCCTGCTTCTCAGGTCTTaGAGACTGGTACAGACTCAT +
Preference number: 5 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGLLLRS*RLVQTH
Trigger: ATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAG...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGGGGCAAACCCCTCTTaGGCTCCTTCCTGCATAGCC +
Preference number: 5 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPGANPS*APSCIA
Trigger: GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GATAGTGCCCTCAGGCAGTTTACCAGGATCTGTGTGCTGTTGTGGTTGCATCCAGGGTGGGTAGAACTCTaGTCCCCAGGTATGTCCATG +
Preference number: 5 (lower is better)
Translates to: DSALRQFTRICVLLWLHPGWVEL*SPGMSM
Trigger: CATGGACATACCTGGGGACAAGAGTTCTACCCACCC...TGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCTGAGGGCACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CAA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCTCATGCTCATTGACATaGTCCAGGTACTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: KLGWVELLSPGMSMASLPSCSLT*SRYSST
Trigger: GGTGGAGGAGTACCTGGACAATGTCAATGAGCATGA...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGATTCCAGTCATGCTCATaGACATTGTCCAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: PLCIDFGVALGEISVGGRFQSCS*TLSRYS
Trigger: GGAGTACCTGGACAATGTCAATGAGCATGACTGGAA...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGGATGGTGGGGGCAAACCCCTCTTTGGCTCCTTCCTGCATAGCCACCCTTAGATTCCAGTCATGCTCATaGACATTGTCCAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: WMVGANPSLAPSCIATLRFQSCS*TLSRYS
Trigger: GGAGTACCTGGACAATGTCAATGAGCATGACTGGAA...TCTAAGGGTGGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCCCACCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCATTCCAGTCATGCTCATaGACATTGTCCAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPFQSCS*TLSRYS
Trigger: GGAGTACCTGGACAATGTCAATGAGCATGACTGGAA...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGCACGAAAGTGGCATCTaGAACTATGTCCATCATACG +
Preference number: 5 (lower is better)
Translates to: ELLSPGMSMASLPRAWMVHESGI*NYVHHT
Trigger: CGTATGATGGACATAGTTCAAGATGCCACTTTCGTG...CACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCAGGGCCTGGATGGTGGCACGAAAGTGGCATCTaGAACTATGTCCATCATACG +
Preference number: 5 (lower is better)
Translates to: NSCPQVCPWLVSPGPGWWHESGI*NYVHHT
Trigger: CGTATGATGGACATAGTTCAAGATGCCACTTTCGTG...CCACCATCCAGGCCCTGGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTTGTGTGCTGTTGTGGTaGCATCCAGCCAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: SSKLGWVELLSPGMSMASCVLLW*HPARWA
Trigger: TGCCCACCTGGCTGGATGCAACCACAACAGCACACA...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp CCCCTGTGTATAGACTTTGGAGTGGCCCTGGGGGAGATAAGTGTGGGTGGGAGAAGGAATCTCATCTTGTaGGACACACGCATCACCTTG +
Preference number: 5 (lower is better)
Translates to: PLCIDFGVALGEISVGGRRNLIL*DTRITL
Trigger: CAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCT...TCTCCCACCCACACTTATCTCCCCCAGGGCCACTCCAAAGTCTATACACAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp CCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTGGGGCAAACCCCTCTTaGGCTCCTTCCTGCATAGCC +
Preference number: 5 (lower is better)
Translates to: PLLLRSLRLVQTHPKSHLGANPS*APSCIA
Trigger: GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC...AAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp GGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGCAAAAGCTCTAGCTTaGGCCTGGAGGCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: GREDPKLPKVCSMSQPALAKALA*AWRQQG
Trigger: TCCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGC...TAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTGCAAAAGCTCTAGCTTaGGCCTGGAGGCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPAKALA*AWRQQG
Trigger: TCCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGC...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TTGAGCAGGATGGATGGTAAATGCCAAGCTGGGTGCAGTGACAGGGGCAGTGGCCAAACTACCAAAAGTTaGCTCCATGTCACAACCTGC +
Preference number: 5 (lower is better)
Translates to: LSRMDGKCQAGCSDRGSGQTTKS*LHVTTC
Trigger: GCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTG...GCCACTGCCCCTGTCACTGCACCCAGCTTGGCATTTACCATCCATCCTGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GCAGCAGGGAGCTCCTGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCACAAACTACCAAAAGTTaGCTCCATGTCACAACCTGC +
Preference number: 5 (lower is better)
Translates to: AAGSSCSSKLGWVELLSPQTTKS*LHVTTC
Trigger: GCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTG...TGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCAGGAGCTCCCTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTTTGGCCCAAACTACCAAAAGTTaGCTCCATGTCACAACCTGC +
Preference number: 5 (lower is better)
Translates to: AGKGSAGPTQQAKALALAQTTKS*LHVTTC
Trigger: GCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTG...GGCCAAAGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTTGTGTGCTGTTGTGGTaGCATCCAGCCAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPCVLLW*HPARWA
Trigger: TGCCCACCTGGCTGGATGCAACCACAACAGCACACA...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAGTGGTACCTGCTCCTaGGTGATATTCAACAGGGTG +
Preference number: 5 (lower is better)
Translates to: LPKVCSMSQPALGLQANVSGTCS*VIFNRV
Trigger: CACCCTGTTGAATATCACCAAGGAGCAGGTACCACT...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS CCA 90 bp CCAGTCATGCTCATTGACATTGTCCAGGTACTCCTCCACCACAAGTaGTACCTGCTCCTTGGTGATATTCTGAGTGAGGAGGCCACACTT +
Preference number: 5 (lower is better)
Translates to: PVMLIDIVQVLLHHK*YLLLGDILSEEATL
Trigger: AAGTGTGGCCTCCTCACTCAGAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACCTGGACAATGTCAATGAGCATGACTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535948.1
ENST00000543561.1
ENST00000544986.1
CDS CCA 90 bp GGCCTCGGTGGTAGTGAGCAGTCTGCAGTGTGGCATACACGAAAGTaGCATCTTGAACTATGTCCATCATACGGTTTCGTAGCATCTTCC +
Preference number: 5 (lower is better)
Translates to: GLGGSEQSAVWHTRK*HLELCPSYGFVASS
Trigger: GGAAGATGCTACGAAACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538199.5
CDS CCA 90 bp CCTTACCCATGGAAAGGCCTCGGTGGTAGTGAGCAGTCTGCAGTGTaGCATACACGAAAGTGGCATCTTGAACTATGTCCATCATACGGT +
Preference number: 5 (lower is better)
Translates to: PYPWKGLGGSEQSAV*HTRKWHLELCPSYG
Trigger: ACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGGCCTTTCCATGGGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538199.5
CDS-3UTR CAA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTGGGGCAAACCCCTCTTaGGCTCCTTCCTGCATAGCC +
Preference number: 5 (lower is better)
Translates to: SASQVFETGTDSSKKPSSGANPS*APSCIA
Trigger: GGCTATGCAGGAAGGAGCCAAAGAGGGGTTTGCCCC...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp CCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTGCAAAAGCTCTAGCTTaGGCCTGGAGGCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: PLLLRSLRLVQTHPKSHLAKALA*AWRQQG
Trigger: TCCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGC...AAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp AAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCCCCAAACTACCAAAAGTTaGCTCCATGTCACAACCTGC +
Preference number: 5 (lower is better)
Translates to: KLGWVELLSPGMSMASLPQTTKS*LHVTTC
Trigger: GCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTG...GGGGAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGTCAGGCTGGAAAGGGCAGTGCAGGTCCCACACAACAGGCAAAAGCTCTAGCTCAAACTACCAAAAGTTaGCTCCATGTCACAACCTGC +
Preference number: 5 (lower is better)
Translates to: CQAGKGSAGPTQQAKALAQTTKS*LHVTTC
Trigger: GCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTG...AGCTAGAGCTTTTGCCTGTTGTGTGGGACCTGCACTGCCCTTTCCAGCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAATCAACACTTCTTTATaGAAGAGACCACCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETINTSL*KRPPLC
Trigger: ACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGAT...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp ACTTTTCATCCTTGTTGTAGCGTGGCCAGCAGGGCAGATTCCCATCATTGGGGTTCATGCTCATTGACATaGTCCAGGTACTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: TFHPCCSVASRADSHHWGSCSLT*SRYSST
Trigger: GGTGGAGGAGTACCTGGACAATGTCAATGAGCATGA...ACCCCAATGATGGGAATCTGCCCTGCTGGCCACGCTACAACAAGGATGAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CAA 90 bp TCATCTTGTTGGACACACGCATCACCTTGGTCCCTGATAGTGCCCTCAGGCAGTTTCCAGTCATGCTCATaGACATTGTCCAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: SSCWTHASPWSLIVPSGSFQSCS*TLSRYS
Trigger: GGAGTACCTGGACAATGTCAATGAGCATGACTGGAA...ACTGCCTGAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTCCAACAAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CAA 90 bp TTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTGGCAGATTCCCATCATaGGGGTTTCTCGGTGGTAGT +
Preference number: 5 (lower is better)
Translates to: LAPSCIATLRIASASQVFGRFPS*GFLGGS
Trigger: ACTACCACCGAGAAACCCCAATGATGGGAATCTGCC...AAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp GAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCAGGTGGGCAACCTTCTaGGCCACTTTCAGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: EDPKLPKVCSMSQPALGLRWATF*ATFSGL
Trigger: TAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACCT...GAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCTGGAGGAATCTCATCTaGTTGGACACACGCATCACC +
Preference number: 5 (lower is better)
Translates to: SKLGWVELLSPGMSMASLWRNLI*LDTRIT
Trigger: GGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCA...GAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATGGCAGATTCCCATCATaGGGGTTTCCTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: LPLLLRSLRLVQTHPKSHGRFPS*GFPVRA
Trigger: TGCCCGCACAGGAAACCCCAATGATGGGAATCTGCC...ATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR CAA 90 bp AGGGGCAGTGGCAGTCTGGGTCGACCTCCCATAAGAAGGAGTCACAAGGAGACAATGCATCTGTTTTCCTaGCAGGGTTCCATATTTGGT +
Preference number: 5 (lower is better)
Translates to: RGSGSLGRPPIRRSHKETMHLFS*QGSIFG
Trigger: ACCAAATATGGAACCCTGCAAGGAAAACAGATGCAT...TGTCTCCTTGTGACTCCTTCTTATGGGAGGTCGACCCAGACTGCCACTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TTCTTGGCCACTTTCAGTGGGTTACTAGTGATGAAAAGTCTGAATAACGCGGTGGCAAAAGCTCTAGCTTaGGCCTGGAGGCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: FLATFSGLLVMKSLNNAVAKALA*AWRQQG
Trigger: TCCCTGCTGCCTCCAGGCCAAAGCTAGAGCTTTTGC...CACCGCGTTATTCAGACTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CAA 90 bp GTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGAACAGACAGATCAACACTTCTTTATaGAAGAGACCACCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: VCSMSQPALGLQANVNRQINTSL*KRPPLC
Trigger: ACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGAT...CTGTCTGTTCACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTTCATGCTCATTGACATaGTCCAGGTACTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: LAPSCIATLRIASASQVFSCSLT*SRYSST
Trigger: GGTGGAGGAGTACCTGGACAATGTCAATGAGCATGA...AAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATTCATGCTCATTGACATaGTCCAGGTACTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: KLPKVCSMSQPALGLQANSCSLT*SRYSST
Trigger: GGTGGAGGAGTACCTGGACAATGTCAATGAGCATGA...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGCAGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTTTCCAGTCATGCTCATaGACATTGTCCAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: CSSKLGWVELLSPGMSMAFQSCS*TLSRYS
Trigger: GGAGTACCTGGACAATGTCAATGAGCATGACTGGAA...AGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GGGTTTCTCGGTGGTAGTGAGCAGTCTGCAGTGTGGCATACACGAAAGTGGCATCACGAAAGTGGCATCTaGAACTATGTCCATCATACG +
Preference number: 5 (lower is better)
Translates to: GFLGGSEQSAVWHTRKWHHESGI*NYVHHT
Trigger: CGTATGATGGACATAGTTCAAGATGCCACTTTCGTG...ATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS-3UTR CAA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATTGGAGGAATCTCATCTaGTTGGACACACGCATCACC +
Preference number: 5 (lower is better)
Translates to: KLPKVCSMSQPALGLQANWRNLI*LDTRIT
Trigger: GGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCA...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTTGGAGGAATCTCATCTaGTTGGACACACGCATCACC +
Preference number: 5 (lower is better)
Translates to: LAPSCIATLRIASASQVFWRNLI*LDTRIT
Trigger: GGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCA...AAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp AGTTCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTAGTGGTACCTGCTCCTaGGTGATATTCAACAGGGTG +
Preference number: 5 (lower is better)
Translates to: SSKLGWVELLSPGMSMASSGTCS*VIFNRV
Trigger: CACCCTGTTGAATATCACCAAGGAGCAGGTACCACT...ACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540579.6
ENST00000540947.6
ENST00000648724.2
CDS CCA 90 bp TACCTCGGTGGTAGTGAGCAGTCTGCAGTGTGGCATACACGAAAGTaGCATCTTGAACTATGTCCATCATACGGTTTCGTAGCATCTTCC +
Preference number: 5 (lower is better)
Translates to: YLGGSEQSAVWHTRK*HLELCPSYGFVASS
Trigger: GGAAGATGCTACGAAACCGTATGATGGACATAGTTCAAGATGCCACTTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543561.1
CDS-3UTR CAA 90 bp CTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTTCTCCCATCAGTGCGGGGTTaGACGATTATTCCACGAGCG +
Preference number: 5 (lower is better)
Translates to: LLRSLRLVQTHPKSHLLLPSVRG*TIIPRA
Trigger: CGCTCGTGGAATAATCGTCAAACCCCGCACTGATGG...GAGAAGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR CAA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTGGGTGGGTAGAACTCTaGTCCCCAGGTATGTCCATG +
Preference number: 5 (lower is better)
Translates to: SASQVFETGTDSSKKPSSGWVEL*SPGMSM
Trigger: CATGGACATACCTGGGGACAAGAGTTCTACCCACCC...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCAGACAGGCACAAGGTaGAGCAGGATGGATGGTAAA +
Preference number: 5 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPQTGTR*SRMDGK
Trigger: TTTACCATCCATCCTGCTCAACCTTGTGCCTGTCTG...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TCTAAACTGGGGTGGGTAGAACTCTTGTCCCCAGGTATGTCCATGGCTAGTCTCCAAACTACCAAAAGTTaGCTCCATGTCACAACCTGC +
Preference number: 5 (lower is better)
Translates to: SKLGWVELLSPGMSMASLQTTKS*LHVTTC
Trigger: GCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTG...GAGACTAGCCATGGACATACCTGGGGACAAGAGTTCTACCCACCCCAGTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp CTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTGATCAACACTTCTTTATaGAAGAGACCACCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: LPKVCSMSQPALGLQANVINTSL*KRPPLC
Trigger: ACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGAT...CACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TTGGCTCCTTCCTGCATAGCCACCCTTAGAATTGCCTCTGCTTCTCAGGTCTTTTTCCAGTCATGCTCATaGACATTGTCCAGGTACTCC +
Preference number: 5 (lower is better)
Translates to: LAPSCIATLRIASASQVFFQSCS*TLSRYS
Trigger: GGAGTACCTGGACAATGTCAATGAGCATGACTGGAA...AAAGACCTGAGAAGCAGAGGCAATTCTAAGGGTGGCTATGCAGGAAGGAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp GCAGGTACTTTTCATCCTTGTTGTAGCGTGGCCAGCAGGGCAGATTCCCATCATCACGAAAGTGGCATCTaGAACTATGTCCATCATACG +
Preference number: 5 (lower is better)
Translates to: AGTFHPCCSVASRADSHHHESGI*NYVHHT
Trigger: CGTATGATGGACATAGTTCAAGATGCCACTTTCGTG...ATGATGGGAATCTGCCCTGCTGGCCACGCTACAACAAGGATGAAAAGTACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CAA 90 bp ACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATGTCACGAAAGTGGCATCTaGAACTATGTCCATCATACG +
Preference number: 5 (lower is better)
Translates to: TTKSLLHVTTCPRPPGQCHESGI*NYVHHT
Trigger: CGTATGATGGACATAGTTCAAGATGCCACTTTCGTG...ACATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATAGGTGGGCAACCTTCTaGGCCACTTTCAGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: LPLLLRSLRLVQTHPKSHRWATF*ATFSGL
Trigger: TAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACCT...ATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp AAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCAGGCCAATAGGAATCTCATCTTGTaGGACACACGCATCACCTTG +
Preference number: 5 (lower is better)
Translates to: KLPKVCSMSQPALGLQANRNLIL*DTRITL
Trigger: CAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCT...ATTGGCCTGGAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCAGGAATCTCATCTTGTaGGACACACGCATCACCTTG +
Preference number: 5 (lower is better)
Translates to: EDPKLPKVCSMSQPALGLRNLIL*DTRITL
Trigger: CAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCT...GAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS TCA 90 bp ACAGGATTGTGGCCAGGATCATGGAAGCCTTCCTTTTCCCTGTTCTaGACCTTCCTTTCTTGGCCTCATATTGAAGGGTCTTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: TGLWPGSWKPSFSLF*TFLSWPHIEGSLVS
Trigger: AGACACCAAAGACCCTTCAATATGAGGCCAAGAAAGGAAGGTTCAGAACAGGGAAAAGGAAGGCTTCCATGATCCTGGCCACAATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543561.1
CDS-3UTR CAA 90 bp TCCTTGAGCTTCATGCCCACTCTTGTGGTAAAATCCAGCTGCAGGTACTTTTCACAGACAGGCACAAGGTaGAGCAGGATGGATGGTAAA +
Preference number: 5 (lower is better)
Translates to: SLSFMPTLVVKSSCRYFSQTGTR*SRMDGK
Trigger: TTTACCATCCATCCTGCTCAACCTTGTGCCTGTCTG...TGAAAAGTACCTGCAGCTGGATTTTACCACAAGAGTGGGCATGAAGCTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000567587.6
CDS-3UTR CAA 90 bp CCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTTCATGCTCATTGACATaGTCCAGGTACTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: PLLLRSLRLVQTHPKSHLSCSLT*SRYSST
Trigger: GGTGGAGGAGTACCTGGACAATGTCAATGAGCATGA...AAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp GAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTCCACGAAAGTGGCATCTaGAACTATGTCCATCATACG +
Preference number: 5 (lower is better)
Translates to: EDPKLPKVCSMSQPALGLHESGI*NYVHHT
Trigger: CGTATGATGGACATAGTTCAAGATGCCACTTTCGTG...GAGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGAATCTCATCTTGTaGGACACACGCATCACCTTG +
Preference number: 5 (lower is better)
Translates to: WERRSQTTKSLLHVTTCPRNLIL*DTRITL
Trigger: CAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCT...AGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTAGGAATCTCATCTTGTaGGACACACGCATCACCTTG +
Preference number: 5 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPRNLIL*DTRITL
Trigger: CAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCT...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGCCTATATTTGGTGACCACTaGAGGCCTCTTGGTGTGCAA +
Preference number: 5 (lower is better)
Translates to: RRSQTTKSLLHVTTCPRPIFGDH*RPLGVQ
Trigger: TTGCACACCAAGAGGCCTCAAGTGGTCACCAAATAT...AGGCCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp GAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTGCCCTAGGATATTTGGTGACCACTaGAGGCCTCTTGGTGTGCAA +
Preference number: 5 (lower is better)
Translates to: ERRSQTTKSLLHVTTCPRIFGDH*RPLGVQ
Trigger: TTGCACACCAAGAGGCCTCAAGTGGTCACCAAATAT...CCTAGGGCAGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS GCA 90 bp AAGAGCTTTGGCTTCAGAATCAAGGGGGCAGACTTGAATCCTGTCTaGACTACTCATTCACTGTGTGACCTAAAGCAAGTTGCTCTACCT +
Preference number: 5 (lower is better)
Translates to: KSFGFRIKGADLNPV*TTHSLCDLKQVALP
Trigger: AGGTAGAGCAACTTGCTTTAGGTCACACAGTGAATGAGTAGTGCAGACAGGATTCAAGTCTGCCCCCTTGATTCTGAAGCCAAAGCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543561.1
CDS-3UTR CAA 90 bp GTGGGTGGGAGAGAAGATCCCAAACTACCAAAAGTTTGCTCCATGTCACAACCTCACGAAAGTGGCATCTaGAACTATGTCCATCATACG +
Preference number: 5 (lower is better)
Translates to: VGGREDPKLPKVCSMSQPHESGI*NYVHHT
Trigger: CGTATGATGGACATAGTTCAAGATGCCACTTTCGTG...AGGTTGTGACATGGAGCAAACTTTTGGTAGTTTGGGATCTTCTCTCCCACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTGACACACGCATCACCTaGGTCCCTGATAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSDTRIT*VPDSAL
Trigger: GAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTC...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp TTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATAGGAATCTCATCTTGTaGGACACACGCATCACCTTG +
Preference number: 5 (lower is better)
Translates to: LPLLLRSLRLVQTHPKSHRNLIL*DTRITL
Trigger: CAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCT...ATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp TTCTTGGCCACTTTCAGTGGGTTACTAGTGATGAAAAGTCTGAATAACGCGGTGAGTGGTACCTGCTCCTaGGTGATATTCAACAGGGTG +
Preference number: 5 (lower is better)
Translates to: FLATFSGLLVMKSLNNAVSGTCS*VIFNRV
Trigger: CACCCTGTTGAATATCACCAAGGAGCAGGTACCACT...CACCGCGTTATTCAGACTTTTCATCACTAGTAACCCACTGAAAGTGGCCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS-3UTR CAA 90 bp TCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATCTTCTCTGCTTCTCAGGTCTTaGAGACTGGTACAGACTCAT +
Preference number: 5 (lower is better)
Translates to: SASQVFETGTDSSKKPSSLLLRS*RLVQTH
Trigger: ATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAG...AGAAGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp TTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGCCATATCAACACTTCTTTATaGAAGAGACCACCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: LPLLLRSLRLVQTHPKSHINTSL*KRPPLC
Trigger: ACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGAT...ATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTCAGACAGGCACAAGGTaGAGCAGGATGGATGGTAAA +
Preference number: 5 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSQTGTR*SRMDGK
Trigger: TTTACCATCCATCCTGCTCAACCTTGTGCCTGTCTG...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535543.5
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AGAATTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGATCAACACTTCTTTATaGAAGAGACCACCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: RIASASQVFETGTDSSKKINTSL*KRPPLC
Trigger: ACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGAT...CTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp AGAAATTCAGGTCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAAGGTGGGCAACCTTCTaGGCCACTTTCAGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: RNSGLINTSLLKRPPLCIRWATF*ATFSGL
Trigger: TAACCCACTGAAAGTGGCCAAGAAGGTTGCCCACCT...TATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGACCTGAATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535543.5
ENST00000540947.6
ENST00000648724.2
CDS-3UTR CAA 90 bp AGAATTGCCTCTGCTTCTCAGGTCTTTGAGACTGGTACAGACTCATCCAAAAAGATGCATCTGTTTTCCTaGCAGGGTTCCATATTTGGT +
Preference number: 5 (lower is better)
Translates to: RIASASQVFETGTDSSKKMHLFS*QGSIFG
Trigger: ACCAAATATGGAACCCTGCAAGGAAAACAGATGCAT...CTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540947.6
ENST00000567587.6
CDS-3UTR CAA 90 bp TCTAATCAACACTTCTTTATTGAAGAGACCACCCCTGTGTATAGACTTTGGAGTATATTTGGTGACCACTaGAGGCCTCTTGGTGTGCAA +
Preference number: 5 (lower is better)
Translates to: SNQHFFIEETTPVYRLWSIFGDH*RPLGVQ
Trigger: TTGCACACCAAGAGGCCTCAAGTGGTCACCAAATAT...ACTCCAAAGTCTATACACAGGGGTGGTCTCTTCAATAAAGAAGTGTTGATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540947.6
ENST00000567587.6
ENST00000648724.2
CDS GCA 72 bp GCAGCCCCCAGTTCCCGCGCGCGTGGCTGTCGTCCGTaGCAGTCCCCGCCGCTCTGGCCACAGCTGCGGTCC +
Preference number: 6 (lower is better)
Translates to: AAPSSRARGCRP*QSPPLWPQLRS
Trigger: GGACCGCAGCTGTGGCCAGAGCGGCGGGGACTGGCACGGACGACAGCCACGCGCGCGGGAACTGGGGGCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS GCA 72 bp GTCGTCCGTGCCAGTCCCCGCCGCTCTGGCCACAGCTaGGGTCCCAAAGGGTACCGGCCCCGCCACCTCAGG +
Preference number: 6 (lower is better)
Translates to: VVRASPRRSGHS*GPKGYRPRHLR
Trigger: CCTGAGGTGGCGGGGCCGGTACCCTTTGGGACCGCAGCTGTGGCCAGAGCGGCGGGGACTGGCACGGACGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS GCA 72 bp CCCCGCCACCTCAGGAAGCCGAAGATGCCGAGCCTGTaGTGCAGAAACACCAGCACCACTTTCTCGCGGGCG +
Preference number: 6 (lower is better)
Translates to: PRHLRKPKMPSL*CRNTSTTFSRA
Trigger: CGCCCGCGAGAAAGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGGTGGCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535543.5
ENST00000535696.1
CDS GCA 72 bp CGTCCGTGCGGCCCCGCCACCTCAGGAAGCCGAAGATaGCGAGCCTGTGCTGCAGAAACACCAGCACCACTT +
Preference number: 6 (lower is better)
Translates to: RPCGPATSGSRR*RACAAETPAPL
Trigger: AAGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGGTGGCGGGGCCGCACGGACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535696.1
CDS CCA 72 bp GGGTCAACCCTGTCCGAACTGAGCACCCCTGCCAGCTaGGTCCCTCACCAACAGGGTGCGGGTACTCCAGAG +
Preference number: 6 (lower is better)
Translates to: GSTLSELSTPAS*VPHQQGAGTPE
Trigger: CTCTGGAGTACCCGCACCCTGTTGGTGAGGGACCCAGCTGGCAGGGGTGCTCAGTTCGGACAGGGTTGACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543561.1
ENST00000544986.1
CDS TCA 72 bp AGTCAGAGCCCTCGTACGAAGAAGCAGCGCCCACGATaGAGGCGCCTCCCGGGAACCAGACCATCACTGGCA +
Preference number: 6 (lower is better)
Translates to: SQSPRTKKQRPR*RRLPGTRPSLA
Trigger: TGCCAGTGATGGTCTGGTTCCCGGGAGGCGCCTTCATCGTGGGCGCTGCTTCTTCGTACGAGGGCTCTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000543561.1
ENST00000648724.2
CDS GCA 72 bp AAGGGTACCGGCCCCGCCACCTCAGGAAGCCGAAGATaGCGAGCCTGTGCTGCAGAAACACCAGCACCACTT +
Preference number: 6 (lower is better)
Translates to: KGTGPATSGSRR*RACAAETPAPL
Trigger: AAGTGGTGCTGGTGTTTCTGCAGCACAGGCTCGGCATCTTCGGCTTCCTGAGGTGGCGGGGCCGGTACCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535543.5
CDS CAA 72 bp ACACCTGGAGAGTGGACGGGGCCAGTGTGGCCACTCTaGGGGACCCTGCATACCTCGGTGGTAGTGAGCAGT +
Preference number: 6 (lower is better)
Translates to: TPGEWTGPVWPL*GTLHTSVVVSS
Trigger: ACTGCTCACTACCACCGAGGTATGCAGGGTCCCCAAGAGTGGCCACACTGGCCCCGTCCACTCTCCAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543561.1
CDS TCA 72 bp AGTCAGAGCCCTCGTACGAAGAAGCAGCGCCCACGATaGAGGCGCCTCCCGGGAACCAGACCATCACTCACT +
Preference number: 6 (lower is better)
Translates to: SQSPRTKKQRPR*RRLPGTRPSLT
Trigger: AGTGAGTGATGGTCTGGTTCCCGGGAGGCGCCTTCATCGTGGGCGCTGCTTCTTCGTACGAGGGCTCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567587.6
CDS CCA 72 bp GTAAACAGCACACCTGGAGAGTGGACGGGGCCAGTGTaGCCACTCTTGGGGACCCTGCATACCTCGGTGGTA +
Preference number: 6 (lower is better)
Translates to: VNSTPGEWTGPV*PLLGTLHTSVV
Trigger: TACCACCGAGGTATGCAGGGTCCCCAAGAGTGGCCACACTGGCCCCGTCCACTCTCCAGGTGTGCTGTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543561.1
CDS CAA 90 bp GTAAACAGCACACCTGGAGAGTGGACGGGGCCAGTGTGGCCACTCTaGGGGACCCTGCATACCTCGGTGGTAGTGAGCAGTCTGCAGTGT +
Preference number: 6 (lower is better)
Translates to: VNSTPGEWTGPVWPL*GTLHTSVVVSSLQC
Trigger: ACACTGCAGACTGCTCACTACCACCGAGGTATGCAGGGTCCCCAAGAGTGGCCACACTGGCCCCGTCCACTCTCCAGGTGTGCTGTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543561.1
CDS TCA 72 bp GGCCGCGGGGAGATCGTTTCAATCCAGGGTCCGCAGTaGGAAGACGGAACCCAAAGCAAAATCCAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: GRGEIVSIQGPQ*EDGTQSKIQAA
Trigger: CGCTGCCTGGATTTTGCTTTGGGTTCCGTCTTCTCACTGCGGACCCTGGATTGAAACGATCTCCCCGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540579.6
CDS CCA 72 bp GGTCTGCATCCAGAGGTGGGAGACTGGACACCCAGTTaGGGTATCAGGTGGGACCTTTGCACCTGTGGCGAA +
Preference number: 6 (lower is better)
Translates to: GLHPEVGDWTPS*GIRWDLCTCGE
Trigger: TTCGCCACAGGTGCAAAGGTCCCACCTGATACCCCAACTGGGTGTCCAGTCTCCCACCTCTGGATGCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544986.1
CDS CAA 72 bp TTCAGGTACAGACAGTCCTCGCTGAAGCGCAGCCACTaGTACCGTTCCCGCGTGCTGACGTACATCGAGGCC +
Preference number: 6 (lower is better)
Translates to: FRYRQSSLKRSH*YRSRVLTYIEA
Trigger: GGCCTCGATGTACGTCAGCACGCGGGAACGGTACAAGTGGCTGCGCTTCAGCGAGGACTGTCTGTACCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000535543.5
ENST00000535696.1
ENST00000538199.5
ENST00000540579.6
ENST00000540947.6
ENST00000543561.1
ENST00000567587.6
ENST00000648724.2
CDS GCA 72 bp GACAGAGCAGGGGACACTGACCTCCCACCCTACTCCTaGTGCTTCTGCTGCTTCCGGAGCAGAAGACTTTCA +
Preference number: 6 (lower is better)
Translates to: DRAGDTDLPPYS*CFCCFRSRRLS
Trigger: TGAAAGTCTTCTGCTCCGGAAGCAGCAGAAGCAGCAGGAGTAGGGTGGGAGGTCAGTGTCCCCTGCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544478.1
CDS CCA 72 bp GAGGCTAAGTGCCTTCTCCTTACCCATGGAAAGGCCTaGGGGCAGAATGGGATGTGGGATTTCGGACAGAGC +
Preference number: 6 (lower is better)
Translates to: EAKCLLLTHGKA*GQNGMWDFGQS
Trigger: GCTCTGTCCGAAATCCCACATCCCATTCTGCCCCCAGGCCTTTCCATGGGTAAGGAGAAGGCACTTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544478.1
CDS TCA 72 bp TCCACCACAAGTGGTACCTGCTCCTTGGTGATATTCTaGGTGAGGAGGCCACACTTACCTGAGGCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: STTSGTCSLVIF*VRRPHLPEAWV