RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CERS6 (Homo sapiens)

Ensembl gene IDs: ENSG00000172292

Ensembl transcript IDs: ENST00000305747.11, ENST00000392687.4

Found 499 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAATCTCCAGAATaGCTAGTTTTGTGGAGACACCATGTACTATCTGGCTGCAGAGAC +
Preference number: 1 (lower is better)
Translates to: DLNGPLTSLSGQSPE*LVLWRHHVLSGCRD
Trigger: GTCTCTGCAGCCAGATAGTACATGGTGTCTCCACAAAACTAGGCATTCTGGAGATTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 90 bp CCCCTCACATCCCTTTCTGGGCAATCTCCAGAATGCCTAGTTTTGTaGAGACACCATGTACTATCTGGCTGCAGAGACTTTCTTAGGTCC +
Preference number: 1 (lower is better)
Translates to: PLTSLSGQSPECLVL*RHHVLSGCRDFLRS
Trigger: GGACCTAAGAAAGTCTCTGCAGCCAGATAGTACATGGTGTCTCCACAAAACTAGGCATTCTGGAGATTGCCCAGAAAGGGATGTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 90 bp ACCCTGGCTTCCTTTTATCAGGAACTCCAGGAGGCTGAAGGAATGTaGGTGCATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACA +
Preference number: 1 (lower is better)
Translates to: TLASFYQELQEAEGM*VHEISKTDLNGPLT
Trigger: TGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATGCACTCACATTCCTTCAGCCTCCTGGAGTTCCTGATAAAAGGAAGCCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 90 bp AATTTTTCACTGAACACAGAAACCATCTCAATAGTTGCTGCTCCCTaGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACT +
Preference number: 1 (lower is better)
Translates to: NFSLNTETISIVAAP*FPGHATDIKPGSQT
Trigger: AGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCAGCAACTATTGAGATGGTTTCTGTGTTCAGTGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 90 bp TTAGAGCTGAACGAGACTCTTGCACTGGGTTTTGCTTGCTCTAAGTaGCAAAGTAAGCTGATGCTCATAGCACATTGGACTACAGCAAGA +
Preference number: 1 (lower is better)
Translates to: LELNETLALGFACSK*QSKLMLIAHWTTAR
Trigger: TCTTGCTGTAGTCCAATGTGCTATGAGCATCAGCTTACTTTGTCACTTAGAGCAAGCAAAACCCAGTGCAAGAGTCTCGTTCAGCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 90 bp GTTGCTTCCCTATGCTCAACATCCATAGGACCAAATTTGGAAAGGTaGACTGTAGTTGGCTTATATGCTGGCCTTAGGTGCTCTTATGAC +
Preference number: 1 (lower is better)
Translates to: VASLCSTSIGPNLER*TVVGLYAGLRCSYD
Trigger: GTCATAAGAGCACCTAAGGCCAGCATATAAGCCAACTACAGTTCACCTTTCCAAATTTGGTCCTATGGATGTTGAGCATAGGGAAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR GCA 90 bp ACTGTAGTTGGCTTATATGCTGGCCTTAGGTGCTCTTATGACCTGTaGTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTC +
Preference number: 1 (lower is better)
Translates to: TVVGLYAGLRCSYDL*LAIFSSLAKRLKRF
Trigger: GAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGAGCACCTAAGGCCAGCATATAAGCCAACTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR GCA 90 bp TCTCACTTCTTGCCTAACCTTTCTGGCTTCTTTACCTTGACTAGATaGCTGTGGCATTATATAATGATGCAGCCCAGCAGAAGTAGGATG +
Preference number: 1 (lower is better)
Translates to: SHFLPNLSGFFTLTR*LWHYIMMQPSRSRM
Trigger: CATCCTACTTCTGCTGGGCTGCATCATTATATAATGCCACAGGCATCTAGTCAAGGTAAAGAAGCCAGAAAGGTTAGGCAAGAAGTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 90 bp GTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTTaGGTTGAACTCAAGTTGGAAATACCTGGAAAAGACCAAGCTTCT +
Preference number: 1 (lower is better)
Translates to: VSACGHVVMHSFQRL*VELKLEIPGKDQAS
Trigger: AGAAGCTTGGTCTTTTCCAGGTATTTCCAACTTGAGTTCAACCCAAAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 90 bp AGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTTGGGTTaGACTCAAGTTGGAAATACCTGGAAAAGACCAAGCTTCTCCTTT +
Preference number: 1 (lower is better)
Translates to: SMWSCGNAFLSKALG*TQVGNTWKRPSFSF
Trigger: AAAGGAGAAGCTTGGTCTTTTCCAGGTATTTCCAACTTGAGTTCAACCCAAAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 90 bp AGTATTACTTCTTCTGGAATCCTTTCTACATACCCCTTTGTACTCTaGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCAACACAG +
Preference number: 1 (lower is better)
Translates to: SITSSGILSTYPFVL*EGLNVTRKEEISTQ
Trigger: CTGTGTTGATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTATGTAGAAAGGATTCCAGAAGAAGTAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 90 bp TTCTTGCCTAACCTTTCTGGCTTCTTTACCTTGACTAGATGCCTGTaGCATTATATAATGATGCAGCCCAGCAGAAGTAGGATGCTAATA +
Preference number: 1 (lower is better)
Translates to: FLPNLSGFFTLTRCL*HYIMMQPSRSRMLI
Trigger: TATTAGCATCCTACTTCTGCTGGGCTGCATCATTATATAATGCCACAGGCATCTAGTCAAGGTAAAGAAGCCAGAAAGGTTAGGCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 90 bp AGGCATTTAGTTTGCTCAAATTCAAACTCCACCAAATACTCTGAATaGAAAGTTTGGCAACAGAACTGGACATGTGGAGGTTCACCAACC +
Preference number: 1 (lower is better)
Translates to: RHLVCSNSNSTKYSE*KVWQQNWTCGGSPT
Trigger: GGTTGGTGAACCTCCACATGTCCAGTTCTGTTGCCAAACTTTCCATTCAGAGTATTTGGTGGAGTTTGAATTTGAGCAAACTAAATGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 90 bp ATGAAGGCATTTAGTTTGCTCAAATTCAAACTCCACCAAATACTCTaGATGGAAAGTTTGGCAACAGAACTGGACATGTGGAGGTTCACC +
Preference number: 1 (lower is better)
Translates to: MKAFSLLKFKLHQIL*MESLATELDMWRFT
Trigger: GGTGAACCTCCACATGTCCAGTTCTGTTGCCAAACTTTCCATTCAGAGTATTTGGTGGAGTTTGAATTTGAGCAAACTAAATGCCTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 90 bp ATTTCTGCTGTTGTCTTCACAGCCCTGATTCACACATTTATATTATaGCATTTTTGTTTGGGGTTCGTTCTAAGTGATGGCCTTCTTGAT +
Preference number: 1 (lower is better)
Translates to: ISAVVFTALIHTFIL*HFCLGFVLSDGLLD
Trigger: ATCAAGAAGGCCATCACTTAGAACGAACCCCAAACAAAAATGCCATAATATAAATGTGTGAATCAGGGCTGTGAAGACAACAGCAGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 90 bp GATCTAAACCTGAACACATGGATCTCTAAAGTTAATTTTAGCCATTaGGAGGACTTGCCCCAGACACTAAAGCAAGCTAAATATGTTCAT +
Preference number: 1 (lower is better)
Translates to: DLNLNTWISKVNFSH*EDLPQTLKQAKYVH
Trigger: ATGAACATATTTAGCTTGCTTTAGTGTCTGGGGCAAGTCCTCTCAATGGCTAAAATTAACTTTAGAGATCCATGTGTTCAGGTTTAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 90 bp AACATTTCCAAGAAAGGGACAAAAACAACTATTAATGCAACATCATaGAGAGATTGGGGACAATTGTGGGTGTCTATAAAGCTCTCTTTG +
Preference number: 1 (lower is better)
Translates to: NISKKGTKTTINATS*RDWGQLWVSIKLSL
Trigger: CAAAGAGAGCTTTATAGACACCCACAATTGTCCCCAATCTCTTCATGATGTTGCATTAATAGTTGTTTTTGTCCCTTTCTTGGAAATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 90 bp GAGATACTGCACATATTTTTCTCTCTCAGCCTTATCAGGCTACCATaGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAG +
Preference number: 1 (lower is better)
Translates to: EILHIFFSLSLIRLP*ESYRQRYIILHHKK
Trigger: CTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATATGTGCAGTATCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 90 bp AGGTTTGAATATAAAATGGAAGATTCAGGCCCTTTCTACCTAAGATaGAGGCATTTAGTTTGCTCAAATTCAAACTCCACCAAATACTCT +
Preference number: 1 (lower is better)
Translates to: RFEYKMEDSGPFYLR*RHLVCSNSNSTKYS
Trigger: AGAGTATTTGGTGGAGTTTGAATTTGAGCAAACTAAATGCCTTCATCTTAGGTAGAAAGGGCCTGAATCTTCCATTTTATATTCAAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTTTCAAAGCTATGGCCTaGTACAGGGGGAGGATGAGA +
Preference number: 2 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFFKAMA*YRGRMR
Trigger: TCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTCCTCACATCCCTTTCTaGGCAATCTCCAGAATGCCT +
Preference number: 2 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFPHIPF*AISRMP
Trigger: AGGCATTCTGGAGATTGCCCAGAAAGGGATGTGAGG...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 90 bp GGTCCCCTCACATCCCTTTCTGGGCAATCTCCAGAATGCCTAGTTTaGTGGAGACACCATGTACTATCTGGCTGCAGAGACTTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: GPLTSLSGQSPECLV*WRHHVLSGCRDFLR
Trigger: CCTAAGAAAGTCTCTGCAGCCAGATAGTACATGGTGTCTCCACAAAACTAGGCATTCTGGAGATTGCCCAGAAAGGGATGTGAGGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTCACTGGCTAAGAGGCTaGAAAGATTCTACCACCTTC +
Preference number: 2 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFHWLRG*KDSTTF
Trigger: GAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTG...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTAGGGGGAGAAGCAGATaGAGCATCTCCTTCACTGTC +
Preference number: 2 (lower is better)
Translates to: GYALSGVSARLLAFLLLSRGRSR*SISFTV
Trigger: GACAGTGAAGGAGATGCTCCATCTGCTTCTCCCCCT...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTACCAAGCTTCTCCTTTaGGTGTCTGCGGATCCTATT +
Preference number: 2 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFTKLLL*VSADPI
Trigger: AATAGGATCCGCAGACACCCAAAGGAGAAGCTTGGT...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTGACGACTGTGTGAAGTaGATGCCATCAGTTAGAGAG +
Preference number: 2 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLDDCVK*MPSVRE
Trigger: CTCTCTAACTGATGGCATTCACTTCACACAGTCGTC...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTGCTGAACGAGACTCTTaGACTGGGTTTTGCTTGCTC +
Preference number: 2 (lower is better)
Translates to: GYALSGVSARLLAFLLLSAERDS*TGFCLL
Trigger: GAGCAAGCAAAACCCAGTGCAAGAGTCTCGTTCAGC...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAACATGGTAGTGGCAAGTaGAGTAACTGGGCTCATTGC +
Preference number: 2 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQHGSGK*SNWAHC
Trigger: GCAATGAGCCCAGTTACTGCACTTGCCACTACCATG...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAATTCAAAGCTATGGCCTaGTACAGGGGGAGGATGAGA +
Preference number: 2 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQFKAMA*YRGRMR
Trigger: TCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTACCAAGCTTCTCCTTTaGGTGTCTGCGGATCCTATT +
Preference number: 2 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLTKLLL*VSADPI
Trigger: AATAGGATCCGCAGACACCCAAAGGAGAAGCTTGGT...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 90 bp TTCTCCACGAAAACAAGCATCAGATACACTACCTCTAAGTATTTATaGGAGGGGTTCCAACAGCCTCGTGGACAGGCCTTCTCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: FSTKTSIRYTTSKYL*EGFQQPRGQAFSAA
Trigger: AGCTGCTGAGAAGGCCTGTCCACGAGGCTGTTGGAACCCCTCCAATAAATACTTAGAGGTAGTGTATCTGATGCTTGTTTTCGTGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTTTTGCTTGCTCTAAGTaGCAAAGTAAGCTGATGCTC +
Preference number: 2 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFFACSK*QSKLML
Trigger: GAGCATCAGCTTACTTTGTCACTTAGAGCAAGCAAA...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAACTAGCTCACACCCATTaGAGAAATCTTGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQLAHTH*RNLGCV
Trigger: CACACAGCCAAGATTTCTTCAATGGGTGTGAGCTAG...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTAGGAATGTGAGTGCATaGGATAAGCAAGACAGATCT +
Preference number: 2 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFRNVSA*DKQDRS
Trigger: AGATCTGTCTTGCTTATCTCATGCACTCACATTCCT...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTAGGGGGAGAAGCAGATaGAGCATCTCCTTCACTGTC +
Preference number: 2 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSRGRSR*SISFTV
Trigger: GACAGTGAAGGAGATGCTCCATCTGCTTCTCCCCCT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTCTTATCAGGCTACCATaGGAAAGCTATAGACAGAGA +
Preference number: 2 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFLIRLP*ESYRQR
Trigger: TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAG...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTGGCAAGTGCAGTAACTaGGCTCATTGCATTTTCTCT +
Preference number: 2 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLGKCSN*AHCIFS
Trigger: AGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCC...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTAAAAGAAACCTTCACTaGCTCTGGGGACTGCAATAT +
Preference number: 2 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFKRNLH*LWGLQY
Trigger: ATATTGCAGTCCCCAGAGCCAGTGAAGGTTTCTTTT...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAATGGGGTCTCAGCATGTaGTCATGTGGTAATGCATTC +
Preference number: 2 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQWGLSM*SCGNAF
Trigger: GAATGCATTACCACATGACCACATGCTGAGACCCCA...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTGTGGCAAAACCTGGCTaGAATCAGTTGCTCTCTTTA +
Preference number: 2 (lower is better)
Translates to: GYALSGVSARLLAFLLLSVAKPG*NQLLSL
Trigger: TAAAGAGAGCAACTGATTTCAGCCAGGTTTTGCCAC...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTATGCTCGAGTGTCATATaGTCTAAACCTGAACACATG +
Preference number: 2 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVCSSVI*SKPEHM
Trigger: CATGTGTTCAGGTTTAGATCATATGACACTCGAGCA...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTGCTGAACGAGACTCTTaGACTGGGTTTTGCTTGCTC +
Preference number: 2 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSAERDS*TGFCLL
Trigger: GAGCAAGCAAAACCCAGTGCAAGAGTCTCGTTCAGC...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAATATGCTGGCCTTAGGTaGTCTTATGACCTGTGCTTA +
Preference number: 2 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQYAGLR*SYDLCL
Trigger: TAAGCACAGGTCATAAGAGCACCTAAGGCCAGCATA...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAATGCTCATAGCACATTaGACTACAGCAAGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVMLIAH*TTARER
Trigger: CCTTTCTCTTGCTGTAGTCCAATGTGCTATGAGCAT...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTGGTAGTGGCAAAACCTaGCTGAAATCAGTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSGSGKT*LKSVAL
Trigger: GAGAGCAACTGATTTCAGCCAGGTTTTGCCACTACC...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTGATTGGGGACAATTGTaGGTGTCTATAAAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLDWGQL*VSIKLS
Trigger: AGAGAGCTTTATAGACACCCACAATTGTCCCCAATC...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAACCTCTAAGTATTTATTaGAGGGGTTCCAACAGCCTC +
Preference number: 2 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQPLSIY*RGSNSL
Trigger: GAGGCTGTTGGAACCCCTCCAATAAATACTTAGAGG...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTGATAGGGCTTTTTCTTaGAAGCTGGTTGCATTAAAG +
Preference number: 2 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLDRAFS*KLVALK
Trigger: CTTTAATGCAACCAGCTTTCAAGAAAAAGCCCTATC...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTAATAATCCAAAATACTaGGAGTTGCTTCCCTATGCT +
Preference number: 2 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFNNPKY*ELLPYA
Trigger: AGCATAGGGAAGCAACTCTCAGTATTTTGGATTATT...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAAAGCTAATCAGAACCTaGAGACCTGAAATACCACAT +
Preference number: 2 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVKLIRT*RPEIPH
Trigger: ATGTGGTATTTCAGGTCTTCAGGTTCTGATTAGCTT...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAACACTACGGGGTACTTTaGCAATGGCACAATTTCATT +
Preference number: 2 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQHYGVL*QWHNFI
Trigger: AATGAAATTGTGCCATTGTCAAAGTACCCCGTAGTG...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTCAGGACACATGGCAGTaGACTATTCAAAATGCTTTG +
Preference number: 2 (lower is better)
Translates to: GYALSGVSARLLAFLLLSQDTWQ*TIQNAL
Trigger: CAAAGCATTTTGAATAGTGCACTGCCATGTGTCCTG...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTATTCCATACAAGTTACTaGAACTGCCATGTGATCACT +
Preference number: 2 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVFHTSY*NCHVIT
Trigger: AGTGATCACATGGCAGTTGCAGTAACTTGTATGGAA...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACTACACTTCAAAGCTATaGCCTGGTACAGGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYYTSKL*PGTGGG
Trigger: TCCTCCCCCTGTACCAGGCCATAGCTTTGAAGTGTA...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTTCTGAATGGAAAGTTTaGCAACAGAACTGGACATGT +
Preference number: 2 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLSEWKV*QQNWTC
Trigger: ACATGTCCAGTTCTGTTGCCAAACTTTCCATTCAGA...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAGATTGGGGACAATTGTaGGTGTCTATAAAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQDWGQL*VSIKLS
Trigger: AGAGAGCTTTATAGACACCCACAATTGTCCCCAATC...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 90 bp CATGTGGTAATGCATTCCTTTCAAAGGCTTTGGGTTGAACTCAAGTaGGAAATACCTGGAAAAGACCAAGCTTCTCCTTTGGGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: HVVMHSFQRLWVELK*EIPGKDQASPLGVC
Trigger: GCAGACACCCAAAGGAGAAGCTTGGTCTTTTCCAGGTATTTCCAACTTGAGTTCAACCCAAAGCCTTTGAAAGGAATGCATTACCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTAACTATGAGCTTCAGTaGATATCCTCCTTCAAAATC +
Preference number: 2 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLNYELQ*ISSFKI
Trigger: GATTTTGAAGGAGGATATTCACTGAAGCTCATAGTT...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTGTAGGGATGAGTCAGTaGTATTTTGGTTTTATCACT +
Preference number: 2 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLVGMSQ*YFGFIT
Trigger: AGTGATAAAACCAAAATATCACTGACTCATCCCTAC...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCACTGGCTAAGAGGCTaGAAAGATTCTACCACCTTC +
Preference number: 2 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYHWLRG*KDSTTF
Trigger: GAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTCCAAATTTGGAAAGGTaGACTGTAGTTGGCTTATAT +
Preference number: 2 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLPNLER*TVVGLY
Trigger: ATATAAGCCAACTACAGTTCACCTTTCCAAATTTGG...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTACAAATAGTTCACTTTaGTTGGGACTTGTAGTTTTG +
Preference number: 2 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFTNSSL*LGLVVL
Trigger: CAAAACTACAAGTCCCAAGCAAAGTGAACTATTTGT...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACCAGGACACATGGCAGTaGACTATTCAAAATGCTTTG +
Preference number: 2 (lower is better)
Translates to: CFCTLVSISAVVFTALIHQDTWQ*TIQNAL
Trigger: CAAAGCATTTTGAATAGTGCACTGCCATGTGTCCTG...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTACTCTCTGGTGTTTCTaGACGCTTGTTAGCATTTCT +
Preference number: 2 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSTLWCF*TLVSIS
Trigger: AGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAATGCTCTTATGACCTGTaGTTAGCCATATTTAGCTCA +
Preference number: 2 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQCSYDL*LAIFSS
Trigger: TGAGCTAAATATGGCTAAGCACAGGTCATAAGAGCA...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTTTTTATCTCACTTCTTaGCTAACCTTTCTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLFYLTS*LTFLAS
Trigger: AGAAGCCAGAAAGGTTAGGCAAGAAGTGAGATAAAA...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTATGCTCATAGCACATTaGACTACAGCAAGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSMLIAH*TTARER
Trigger: CCTTTCTCTTGCTGTAGTCCAATGTGCTATGAGCAT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTCCATTGAAGAAATCTTaGCTGTGTGCACAAGAAATG +
Preference number: 2 (lower is better)
Translates to: GYALSGVSARLLAFLLLSPLKKS*LCAQEM
Trigger: CATTTCTTGTGCACACAGCCAAGATTTCTTCAATGG...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGAAGGATACGCACTCTCTaGTGTTTCTGCACGCTTGTT +
Preference number: 2 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRRIRTL*CFCTLV
Trigger: AACAAGCGTGCAGAAACACCAGAGAGTGCGTATCCT...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 90 bp TCTTCTGGAATCCTTTCTACATACCCCTTTGTACTCTGGGAAGGTTaGAATGTGACCAGGAAGGAGGAGATATCAACACAGGCTAAGTTA +
Preference number: 2 (lower is better)
Translates to: SSGILSTYPFVLWEG*NVTRKEEISTQAKL
Trigger: TAACTTAGCCTGTGTTGATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTATGTAGAAAGGATTCCAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACGGTACAGGGGGAGGATaGGATACTGCACATATTTTT +
Preference number: 2 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYGTGGG*DTAHIF
Trigger: AAAAATATGTGCAGTATCTCATCCTCCCCCTGTACC...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAATTCTATTGTACCTGGTaGGTGGGTTTTATGAAAAGA +
Preference number: 2 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQFYCTW*VGFMKR
Trigger: TCTTTTCATAAAACCCACTCACCAGGTACAATAGAA...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTCTAAGACAGTACAAATaGAAATACTGTTCCCTTGTG +
Preference number: 2 (lower is better)
Translates to: GYALSGVSARLLAFLLLSLRQYK*KYCSLV
Trigger: CACAAGGGAACAGTATTTGCATTTGTACTGTCTTAG...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTTTCTTGAAAGCTGGTTaGATTAAAGTGCTCTGCACT +
Preference number: 2 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSFLKAG*IKVLCT
Trigger: AGTGCAGAGCACTTTAATGCAACCAGCTTTCAAGAA...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACTATGCTGGCCTTAGGTaGTCTTATGACCTGTGCTTA +
Preference number: 2 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYYAGLR*SYDLCL
Trigger: TAAGCACAGGTCATAAGAGCACCTAAGGCCAGCATA...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGACGAGACTCTTGCACTaGGTTTTGCTTGCTCTAAGT +
Preference number: 2 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQTRLLH*VLLALS
Trigger: ACTTAGAGCAAGCAAAACCCAGTGCAAGAGTCTCGT...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACCCATTGAAGAAATCTTaGCTGTGTGCACAAGAAATG +
Preference number: 2 (lower is better)
Translates to: CFCTLVSISAVVFTALIHPLKKS*LCAQEM
Trigger: CATTTCTTGTGCACACAGCCAAGATTTCTTCAATGG...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGTACCCCTTTGTACTCTaGGAAGGTTTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQYPFVL*EGLNVT
Trigger: GGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTA...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 90 bp CTGATTTTATCTCACTTCTTGCCTAACCTTTCTGGCTTCTTTACCTaGACTAGATGCCTGTGGCATTATATAATGATGCAGCCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: LILSHFLPNLSGFFT*TRCLWHYIMMQPSR
Trigger: TCTGCTGGGCTGCATCATTATATAATGCCACAGGCATCTAGTCAAGGTAAAGAAGCCAGAAAGGTTAGGCAAGAAGTGAGATAAAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTGGTGCTGAGATATTATaGAAGGAACTGCATTTGCAA +
Preference number: 2 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSGAEIL*KELHLQ
Trigger: TTGCAAATGCAGTTCCTTTCATAATATCTCAGCACC...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTTGCTTGCTCTAAGTaGCAAAGTAAGCTGATGCTC +
Preference number: 2 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRFACSK*QSKLML
Trigger: GAGCATCAGCTTACTTTGTCACTTAGAGCAAGCAAA...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAGAAATCTTGGCTGTGTaGACAAGAAATGAAATCTAT +
Preference number: 2 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQEILAV*TRNEIY
Trigger: ATAGATTTCATTTCTTGTGCACACAGCCAAGATTTC...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCTTATCAGGCTACCATaGGAAAGCTATAGACAGAGA +
Preference number: 2 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYLIRLP*ESYRQR
Trigger: TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 90 bp TCACCAACCATTTTGATCAAAGGTGATCTGATTTTATCTCACTTCTaGCCTAACCTTTCTGGCTTCTTTACCTTGACTAGATGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: SPTILIKGDLILSHF*PNLSGFFTLTRCLW
Trigger: CCACAGGCATCTAGTCAAGGTAAAGAAGCCAGAAAGGTTAGGCAAGAAGTGAGATAAAATCAGATCACCTTTGATCAAAATGGTTGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTAACTATGAGCTTCAGTaGATATCCTCCTTCAAAATC +
Preference number: 2 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSNYELQ*ISSFKI
Trigger: GATTTTGAAGGAGGATATTCACTGAAGCTCATAGTT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGATGCTCGAGTGTCATATaGTCTAAACCTGAACACATG +
Preference number: 2 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRCSSVI*SKPEHM
Trigger: CATGTGTTCAGGTTTAGATCATATGACACTCGAGCA...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTACAAATAGTTCACTTTaGTTGGGACTTGTAGTTTTG +
Preference number: 2 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSTNSSL*LGLVVL
Trigger: CAAAACTACAAGTCCCAAGCAAAGTGAACTATTTGT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTTGAAAGCTGGTTaGATTAAAGTGCTCTGCACT +
Preference number: 2 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRFLKAG*IKVLCT
Trigger: AGTGCAGAGCACTTTAATGCAACCAGCTTTCAAGAA...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 90 bp AAAGTTTGGCAACAGAACTGGACATGTGGAGGTTCACCAACCATTTaGATCAAAGGTGATCTGATTTTATCTCACTTCTTGCCTAACCTT +
Preference number: 2 (lower is better)
Translates to: KVWQQNWTCGGSPTI*IKGDLILSHFLPNL
Trigger: AAGGTTAGGCAAGAAGTGAGATAAAATCAGATCACCTTTGATCAAAATGGTTGGTGAACCTCCACATGTCCAGTTCTGTTGCCAAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACAGTGGCAAAACCTGGCTaGAATCAGTTGCTCTCTTTA +
Preference number: 2 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTVAKPG*NQLLSL
Trigger: TAAAGAGAGCAACTGATTTCAGCCAGGTTTTGCCAC...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACATTAATGCAACATCATaGAGAGATTGGGGACAATTG +
Preference number: 2 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYINATS*RDWGQL
Trigger: CAATTGTCCCCAATCTCTTCATGATGTTGCATTAAT...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGCAATTACATACAGCATaGCTACAAAGAGAGAATGGT +
Preference number: 2 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQQLHTA*LQRENG
Trigger: ACCATTCTCTCTTTGTAGGCATGCTGTATGTAATTG...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGATTCGTCCGGTTTAAATaGTCACTAAGACTGTATAGG +
Preference number: 2 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRFVRFK*SLRLYR
Trigger: CCTATACAGTCTTAGTGACCATTTAAACCGGACGAA...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGGGTAGTGGCAAAACCTaGCTGAAATCAGTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLGSGKT*LKSVAL
Trigger: GAGAGCAACTGATTTCAGCCAGGTTTTGCCACTACC...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGAGGATACGCACTCTCTaGTGTTTCTGCACGCTTGTT +
Preference number: 2 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLRIRTL*CFCTLV
Trigger: AACAAGCGTGCAGAAACACCAGAGAGTGCGTATCCT...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACTTGACTAGATGCCTGTaGCATTATATAATGATGCAG +
Preference number: 2 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYLTRCL*HYIMMQ
Trigger: CTGCATCATTATATAATGCCACAGGCATCTAGTCAA...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGACTAAGACAGTACAAATaGAAATACTGTTCCCTTGTG +
Preference number: 2 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRLRQYK*KYCSLV
Trigger: CACAAGGGAACAGTATTTGCATTTGTACTGTCTTAG...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR GCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGGAAATCTTGGCTGTGTaGACAAGAAATGAAATCTAT +
Preference number: 2 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQEILAV*TRNEIY
Trigger: ATAGATTTCATTTCTTGTGCACACAGCCAAGATTTC...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACAAGTATTACTTCTTCTaGAATCCTTTCTACATACCC +
Preference number: 2 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYKYYFF*NPFYIP
Trigger: GGGTATGTAGAAAGGATTCCAGAAGAAGTAATACTT...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACAGATAGGGCTTTTTCTTaGAAGCTGGTTGCATTAAAG +
Preference number: 2 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTDRAFS*KLVALK
Trigger: CTTTAATGCAACCAGCTTTCAAGAAAAAGCCCTATC...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR TCA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGGGTGCTGAGATATTATaGAAGGAACTGCATTTGCAA +
Preference number: 2 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLGAEIL*KELHLQ
Trigger: TTGCAAATGCAGTTCCTTTCATAATATCTCAGCACC...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CCA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGTTCGTCCGGTTTAAATaGTCACTAAGACTGTATAGG +
Preference number: 2 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLFVRFK*SLRLYR
Trigger: CCTATACAGTCTTAGTGACCATTTAAACCGGACGAA...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 90 bp ATTCCCAGAACACAGGACAAATTCCCATTCTTAACAGTGATTTCCTaGTTTATAACTATGAGCTTCAGTGAATATCCTCCTTCAAAATCA +
Preference number: 2 (lower is better)
Translates to: IPRTQDKFPFLTVIS*FITMSFSEYPPSKS
Trigger: TGATTTTGAAGGAGGATATTCACTGAAGCTCATAGTTATAAACAAGGAAATCACTGTTAAGAATGGGAATTTGTCCTGTGTTCTGGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 72 bp CTGAACACAGAAACCATCTCAATAGTTGCTGCTCCCTaGTTTCCAGGCCACGCAACAGACATCAAACCAGGA +
Preference number: 3 (lower is better)
Translates to: LNTETISIVAAP*FPGHATDIKPG
Trigger: TCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCAGCAACTATTGAGATGGTTTCTGTGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAGTACTCTGGGAAGGTTaGAATGTGACCAGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQVLWEG*NVTRKE
Trigger: CTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTAC...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR GCA 72 bp GGCTTATATGCTGGCCTTAGGTGCTCTTATGACCTGTaGTTAGCCATATTTAGCTCACTGGCTAAGAGGCTG +
Preference number: 3 (lower is better)
Translates to: GLYAGLRCSYDL*LAIFSSLAKRL
Trigger: CAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGAGCACCTAAGGCCAGCATATAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR GCA 72 bp TGCCTAGTTTTGTGGAGACACCATGTACTATCTGGCTaGAGAGACTTTCTTAGGTCCCGTGTTAGACCCCAT +
Preference number: 3 (lower is better)
Translates to: CLVLWRHHVLSG*RDFLRSRVRPH
Trigger: ATGGGGTCTAACACGGGACCTAAGAAAGTCTCTGCAGCCAGATAGTACATGGTGTCTCCACAAAACTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTTGGGTTGAACTCAAGTaGGAAATACCTGGAAAAGAC +
Preference number: 3 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFWVELK*EIPGKD
Trigger: GTCTTTTCCAGGTATTTCCAACTTGAGTTCAACCCA...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCGGTGTTTCTGCACGCTaGTTAGCATTTCTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: IPLCTLGRFECDQEGGDIGVSAR*LAFLLL
Trigger: CAACAGCAGAAATGCTAACAAGCGTGCAGAAACACC...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTGGTTCACCAACCATTTaGATCAAAGGTGATCTGATT +
Preference number: 3 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFGSPTI*IKGDLI
Trigger: AATCAGATCACCTTTGATCAAAATGGTTGGTGAACC...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAACCAGAATGCCTAGTTTaGTGGAGACACCATGTACTA +
Preference number: 3 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQPECLV*WRHHVL
Trigger: TAGTACATGGTGTCTCCACAAAACTAGGCATTCTGG...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 72 bp TTTGCTGCGTTTTCTTCAAGGGCGGCTTGTGACAACTaGACTGCTGATTATTCCTTCCATGGACAGCATGGT +
Preference number: 3 (lower is better)
Translates to: FAAFSSRAACDN*TADYSFHGQHG
Trigger: ACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCCTTGAAGAAAACGCAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 72 bp TCCCTTTCTGGGCAATCTCCAGAATGCCTAGTTTTGTaGAGACACCATGTACTATCTGGCTGCAGAGACTTT +
Preference number: 3 (lower is better)
Translates to: SLSGQSPECLVL*RHHVLSGCRDF
Trigger: AAAGTCTCTGCAGCCAGATAGTACATGGTGTCTCCACAAAACTAGGCATTCTGGAGATTGCCCAGAAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAGCAAATACTGTTCCCTaGTGTCAATTACATACAGCA +
Preference number: 3 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVANTVP*CQLHTA
Trigger: TGCTGTATGTAATTGACACAAGGGAACAGTATTTGC...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTCTCTTGCACTGGGTTTaGCTTGCTCTAAGTGACAAA +
Preference number: 3 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSLLHWV*LALSDK
Trigger: TTTGTCACTTAGAGCAAGCAAAACCCAGTGCAAGAG...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTCCCATTGAAGAAATCTaGGCTGTGTGCACAAGAAAT +
Preference number: 3 (lower is better)
Translates to: GYALSGVSARLLAFLLLSPIEEI*AVCTRN
Trigger: ATTTCTTGTGCACACAGCCAAGATTTCTTCAATGGG...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAACCCATTGAAGAAATCTaGGCTGTGTGCACAAGAAAT +
Preference number: 3 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQPIEEI*AVCTRN
Trigger: ATTTCTTGTGCACACAGCCAAGATTTCTTCAATGGG...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACACTAGCTCACACCCATaGAAGAAATCTTGGCTGTGT +
Preference number: 3 (lower is better)
Translates to: CFCTLVSISAVVFTALIHTSSHP*KKSWLC
Trigger: ACACAGCCAAGATTTCTTCAATGGGTGTGAGCTAGT...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTGGTGTTTCTGCACGCTaGTTAGCATTTCTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSGVSAR*LAFLLL
Trigger: CAACAGCAGAAATGCTAACAAGCGTGCAGAAACACC...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR GCA 72 bp TTTTTCACTGAACACAGAAACCATCTCAATAGTTGCTaGTCCCTGGTTTCCAGGCCACGCAACAGACATCAA +
Preference number: 3 (lower is better)
Translates to: FFTEHRNHLNSC*SLVSRPRNRHQ
Trigger: TTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCAGCAACTATTGAGATGGTTTCTGTGTTCAGTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTGATGCTCATAGCACATaGGACTACAGCAAGAGAAAG +
Preference number: 3 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSDAHST*DYSKRK
Trigger: CTTTCTCTTGCTGTAGTCCAATGTGCTATGAGCATC...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAATTCAAAGGCTTTGGGTaGAACTCAAGTTGGAAATAC +
Preference number: 3 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQFKGFG*NSSWKY
Trigger: GTATTTCCAACTTGAGTTCAACCCAAAGCCTTTGAA...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 72 bp AACGAGACTCTTGCACTGGGTTTTGCTTGCTCTAAGTaGCAAAGTAAGCTGATGCTCATAGCACATTGGACT +
Preference number: 3 (lower is better)
Translates to: NETLALGFACSK*QSKLMLIAHWT
Trigger: AGTCCAATGTGCTATGAGCATCAGCTTACTTTGTCACTTAGAGCAAGCAAAACCCAGTGCAAGAGTCTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 72 bp TACACTTCAAAGCTATGGCCTGGTACAGGGGGAGGATaGGATACTGCACATATTTTTCTCTCTCAGCCTTAT +
Preference number: 3 (lower is better)
Translates to: YTSKLWPGTGGG*DTAHIFLSQPY
Trigger: ATAAGGCTGAGAGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAAGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 72 bp CTATGCTCAACATCCATAGGACCAAATTTGGAAAGGTaGACTGTAGTTGGCTTATATGCTGGCCTTAGGTGC +
Preference number: 3 (lower is better)
Translates to: LCSTSIGPNLER*TVVGLYAGLRC
Trigger: GCACCTAAGGCCAGCATATAAGCCAACTACAGTTCACCTTTCCAAATTTGGTCCTATGGATGTTGAGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 72 bp GTGGCCTATTATTATGAAGAACTAAAATGTGGCCAGTaGACCAGTCAGTGCTCATCACTACGGGGTACTTTG +
Preference number: 3 (lower is better)
Translates to: VAYYYEELKCGQ*TSQCSSLRGTL
Trigger: CAAAGTACCCCGTAGTGATGAGCACTGACTGGTTCACTGGCCACATTTTAGTTCTTCATAATAATAGGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR GCA 72 bp GATTATTCCTTCCATGGACAGCATGGTAGTGGCAAGTaGAGTAACTGGGCTCATTGCATTTTCTCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: DYSFHGQHGSGK*SNWAHCIFSFH
Trigger: ATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACTACCATGCTGTCCATGGAAGGAATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 72 bp TCTTCTGGAATCCTTTCTACATACCCCTTTGTACTCTaGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATA +
Preference number: 3 (lower is better)
Translates to: SSGILSTYPFVL*EGLNVTRKEEI
Trigger: TATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTATGTAGAAAGGATTCCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGAGATGCTCATAGCACATaGGACTACAGCAAGAGAAAG +
Preference number: 3 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRDAHST*DYSKRK
Trigger: CTTTCTCTTGCTGTAGTCCAATGTGCTATGAGCATC...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACACTAGCTCACACCCATaGAAGAAATCTTGGCTGTGT +
Preference number: 3 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYTSSHP*KKSWLC
Trigger: ACACAGCCAAGATTTCTTCAATGGGTGTGAGCTAGT...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCCCCACAGATTGCAAATaGTGGGCAAAAAGCTTTAAT +
Preference number: 3 (lower is better)
Translates to: IPLCTLGRFECDQEGGDIPTDCK*WAKSFN
Trigger: ATTAAAGCTTTTTGCCCACAATTTGCAATCTGTGGG...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 72 bp GACTGCACTAATTATAGGGTAGTGGCAAAACCTGGCTaGAATCAGTTGCTCTCTTTATGTTATTCCCAGAAC +
Preference number: 3 (lower is better)
Translates to: DCTNYRVVAKPG*NQLLSLCYSQN
Trigger: GTTCTGGGAATAACATAAAGAGAGCAACTGATTTCAGCCAGGTTTTGCCACTACCCTATAATTAGTGCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 72 bp GTTTGCTCAAATTCAAACTCCACCAAATACTCTGAATaGAAAGTTTGGCAACAGAACTGGACATGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: VCSNSNSTKYSE*KVWQQNWTCGG
Trigger: ACCTCCACATGTCCAGTTCTGTTGCCAAACTTTCCATTCAGAGTATTTGGTGGAGTTTGAATTTGAGCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGCTATTAACCCACAGATaGCAAATTGTGGGCAAAAAG +
Preference number: 3 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQLLTHR*QIVGKK
Trigger: CTTTTTGCCCACAATTTGCAATCTGTGGGTTAATAG...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGACCCACAGATTGCAAATaGTGGGCAAAAAGCTTTAAT +
Preference number: 3 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRPTDCK*WAKSFN
Trigger: ATTAAAGCTTTTTGCCCACAATTTGCAATCTGTGGG...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 72 bp CTGAACACATGGATCTCTAAAGTTAATTTTAGCCATTaGGAGGACTTGCCCCAGACACTAAAGCAAGCTAAA +
Preference number: 3 (lower is better)
Translates to: LNTWISKVNFSH*EDLPQTLKQAK
Trigger: TTTAGCTTGCTTTAGTGTCTGGGGCAAGTCCTCTCAATGGCTAAAATTAACTTTAGAGATCCATGTGTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 72 bp TTTTCTCTTTCCATACAAGTTACTGCAACTGCCATGTaGTCACTTTTCCAGCAGGCTGACTTCGATTTGATT +
Preference number: 3 (lower is better)
Translates to: FSLSIQVTATAM*SLFQQADFDLI
Trigger: AATCAAATCGAAGTCAGCCTGCTGGAAAAGTGATCACATGGCAGTTGCAGTAACTTGTATGGAAAGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 72 bp AGTTGGAAATACCTGGAAAAGACCAAGCTTCTCCTTTaGGTGTCTGCGGATCCTATTAAAAATATTCGTGAT +
Preference number: 3 (lower is better)
Translates to: SWKYLEKTKLLL*VSADPIKNIRD
Trigger: ATCACGAATATTTTTAATAGGATCCGCAGACACCCAAAGGAGAAGCTTGGTCTTTTCCAGGTATTTCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGATTATGGCATTTTTGTTaGGGGTTCGTTCTAAGTGAT +
Preference number: 3 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRLWHFC*GFVLSD
Trigger: ATCACTTAGAACGAACCCCAAACAAAAATGCCATAA...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACAATAGTCTTTCTCCCATaGGCTTTATTTTGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTIVFLP*ALFCSA
Trigger: TGCTGAGCAAAATAAAGCCAATGGGAGAAAGACTAT...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 72 bp TATAAAATGGAAGATTCAGGCCCTTTCTACCTAAGATaGAGGCATTTAGTTTGCTCAAATTCAAACTCCACC +
Preference number: 3 (lower is better)
Translates to: YKMEDSGPFYLR*RHLVCSNSNST
Trigger: GGTGGAGTTTGAATTTGAGCAAACTAAATGCCTTCATCTTAGGTAGAAAGGGCCTGAATCTTCCATTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CCA 72 bp CACATATTTTTCTCTCTCAGCCTTATCAGGCTACCATaGGAAAGCTATAGACAGAGATATATTATTCTTCAC +
Preference number: 3 (lower is better)
Translates to: HIFFSLSLIRLP*ESYRQRYIILH
Trigger: GTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR-3UTR CAA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGGCAAATACTGTTCCCTaGTGTCAATTACATACAGCA +
Preference number: 3 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLANTVP*CQLHTA
Trigger: TGCTGTATGTAATTGACACAAGGGAACAGTATTTGC...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR TCA 72 bp AAAGCAGCAATCATCTGCATTTTTACCACATACACTTaGATAATCCAAAATACTGAGAGTTGCTTCCCTATG +
Preference number: 3 (lower is better)
Translates to: KAAIICIFTTYT*IIQNTESCFPM
Trigger: CATAGGGAAGCAACTCTCAGTATTTTGGATTATTCAAGTGTATGTGGTAAAAATGCAGATGATTGCTGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTCTTCTCAGCAGCTACTaGGTGCCCCCTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLLLSSY*VPPRGG
Trigger: CCCACCCCTAGGGGGCACTCAGTAGCTGCTGAGAAG...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTTCAGGTCCGCCCAGGTaGCATTGTGCGGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLSGPPR*HCAGAK
Trigger: TTTGGCTCCCGCACAATGTCACCTGGGCGGACCTGA...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAGTGGGGAGGGGCCAGTaGACATGGAGGCAAACCACA +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVVGRGQ*TWRQTT
Trigger: TGTGGTTTGCCTCCATGTGCACTGGCCCCTCCCCAC...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTGTTCCAACAGCCTCGTaGACAGGCCTTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFVPTAS*TGLLSS
Trigger: GCTGCTGAGAAGGCCTGTCCACGAGGCTGTTGGAAC...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAATCAGGTCCGCCCAGGTaGCATTGTGCGGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQSGPPR*HCAGAK
Trigger: TTTGGCTCCCGCACAATGTCACCTGGGCGGACCTGA...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTTACCACTGGTCCCATTaGTGGTTGTCGCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFYHWSH*WLSQCG
Trigger: CCCACACTGCGACAACCACCAATGGGACCAGTGGTA...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAGTTCCAACAGCCTCGTaGACAGGCCTTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVVPTAS*TGLLSS
Trigger: GCTGCTGAGAAGGCCTGTCCACGAGGCTGTTGGAAC...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTATGTGGTCCATTGGCCTaGATGTTGAGGGCTATGGCG +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVCGPLA*MLRAMA
Trigger: CGCCATAGCCCTCAACATTCAGGCCAATGGACCACA...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTGTGGGGAGGGGCCAGTaGACATGGAGGCAAACCACA +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSVGRGQ*TWRQTT
Trigger: TGTGGTTTGCCTCCATGTGCACTGGCCCCTCCCCAC...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTACACTGGTCCCATTGGTaGTTGTCGCAGTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVHWSHW*LSQCGD
Trigger: ATCCCCACACTGCGACAACCACCAATGGGACCAGTG...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTGTGGTCCATTGGCCTaGATGTTGAGGGCTATGGCG +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSCGPLA*MLRAMA
Trigger: CGCCATAGCCCTCAACATTCAGGCCAATGGACCACA...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCTTCTCAGCAGCTACTaGGTGCCCCCTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYLLSSY*VPPRGG
Trigger: CCCACCCCTAGGGGGCACTCAGTAGCTGCTGAGAAG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAACCACCACCCCTTCTATaGCAACAAACGGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQPPPLL*QQTAVE
Trigger: CTCCACAGCCGTTTGTTGTCATAGAAGGGGTGGTGG...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTACATCCCAGTCCAGTTaGTTGGAGAGGCCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFTSQSS*LERPSN
Trigger: ATTGGAAGGCCTCTCCAAGCAACTGGACTGGGATGT...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTACCCGTTGGTACCACTaGTCCCATTGGTGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSTRWYH*SHWWLS
Trigger: CGACAACCACCAATGGGACCAGTGGTACCAACGGGT...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTAGGGGGAGAAGCAGATaGAGCATCTCCTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLRGRSR*SISFTV
Trigger: GACAGTGAAGGAGATGCTCCATCTGCTTCTCCCCCT...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTATAGTTGCTGCTCCCTaGTTTCCAGGCCACGCAACA +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLIVAAP*FPGHAT
Trigger: TGTTGCGTGGCCTGGAAACCAGGGAGCAGCAACTAT...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTACTGCAACTGCCATGTaGTCACTTTTCCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLTATAM*SLFQQA
Trigger: AGCCTGCTGGAAAAGTGATCACATGGCAGTTGCAGT...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTGGCTGTGGAGGTAAATaGCTATGTGGGCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFGCGGK*LCGQRV
Trigger: AACTCTTTGCCCACATAGTCATTTACCTCCACAGCC...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAGAAACCAGCGCTGAATaGTTCGAACATCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVETSAE*FEHPSP
Trigger: TGGACTGGGATGTTCGAAGCATTCAGCGCTGGTTTC...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTCATGGTAGTGGCAAGTaGAGTAACTGGGCTCATTGC +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLHGSGK*SNWAHC
Trigger: GCAATGAGCCCAGTTACTGCACTTGCCACTACCATG...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGCAGCCTGCGGGAAGGTaGCCTCCTCCGTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQQPAGR*PPPCSS
Trigger: TGAAGAACACGGAGGAGGCCACCTTCCCGCAGGCTG...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCGTGGTTGTCGCAGTGTaGGGATTCTTTCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: IPLCTLGRFECDQEGGDIVVVAV*GFFPGG
Trigger: ACCTCCGGGAAAGAATCCCCACACTGCGACAACCAC...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTATACACTTCAAAGCTATaGCCTGGTACAGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVYTSKL*PGTGGG
Trigger: TCCTCCCCCTGTACCAGGCCATAGCTTTGAAGTGTA...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACTGTCGAAACCAGCGCTaGATGCTTCGAACATCCCAG +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHCRNQR*MLRTSQ
Trigger: CTGGGATGTTCGAAGCATTCAGCGCTGGTTTCGACA...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCTGTCGAAACCAGCGCTaGATGCTTCGAACATCCCAG +
Preference number: 4 (lower is better)
Translates to: IPLCTLGRFECDQEGGDICRNQR*MLRTSQ
Trigger: CTGGGATGTTCGAAGCATTCAGCGCTGGTTTCGACA...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTAGTGAAGGTCAGTTGTaGGTGGCTGATAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSSEGQL*VADRGS
Trigger: ACTACCCCTATCAGCCACTCACAACTGACCTTCACT...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTAGATCCCTGCCATCTTaGTTTGTCCACTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSRSLPS*FVHSCP
Trigger: AGGACAGGAGTGGACAAAGCAAGATGGCAGGGATCT...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTATTGGCTTCTCCTGATTaGGTCTTTGTCGAAACCAGC +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVLASPD*VFVETS
Trigger: GCTGGTTTCGACAAAGACGCAATCAGGAGAAGCCAA...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTGGGCAATCTCCAGAATaGCTAGTTTTGTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLGQSPE*LVLWRH
Trigger: GTGTCTCCACAAAACTAGGCATTCTGGAGATTGCCC...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGACAGCCTGCGGGAAGGTaGCCTCCTCCGTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRQPAGR*PPPCSS
Trigger: TGAAGAACACGGAGGAGGCCACCTTCCCGCAGGCTG...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTTTTCCAGAATGGCATTaGGCGGAGCAATTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLFPEWH*AEQFVV
Trigger: GACCACAAATTGCTCCGCCCAATGCCATTCTGGAAA...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTAGGGGGAGAAGCAGATaGAGCATCTCCTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSRGRSR*SISFTV
Trigger: GACAGTGAAGGAGATGCTCCATCTGCTTCTCCCCCT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTGGTAGTGGCAAAACCTaGCTGAAATCAGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLGSGKT*LKSVAL
Trigger: GAGAGCAACTGATTTCAGCCAGGTTTTGCCACTACC...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACATAGTTGCTGCTCCCTaGTTTCCAGGCCACGCAACA +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHIVAAP*FPGHAT
Trigger: TGTTGCGTGGCCTGGAAACCAGGGAGCAGCAACTAT...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 72 bp ACATCCCTTTCTGGGCAATCTCCAGAATGCCTAGTTTaGTGGAGACACCATGTACTATCTGGCTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TSLSGQSPECLV*WRHHVLSGCRD
Trigger: GTCTCTGCAGCCAGATAGTACATGGTGTCTCCACAAAACTAGGCATTCTGGAGATTGCCCAGAAAGGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCGTGCTTGGCTTCTCCTaGTTGCGTCTTTGTCGAAAC +
Preference number: 4 (lower is better)
Translates to: IPLCTLGRFECDQEGGDIVLGFS*LRLCRN
Trigger: GTTTCGACAAAGACGCAATCAGGAGAAGCCAAGCAC...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAGGTACAGGGGGAGGATaGGATACTGCACATATTTTT +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVGTGGG*DTAHIF
Trigger: AAAAATATGTGCAGTATCTCATCCTCCCCCTGTACC...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTACTGCAACTGCCATGTaGTCACTTTTCCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSTATAM*SLFQQA
Trigger: AGCCTGCTGGAAAAGTGATCACATGGCAGTTGCAGT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACGAAACCAGCGCTGAATaGTTCGAACATCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHETSAE*FEHPSP
Trigger: TGGACTGGGATGTTCGAAGCATTCAGCGCTGGTTTC...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTCATCCTTGGACACCTTaGCTCTTGAAACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSHPWTP*LLKQLC
Trigger: GCAAAGCTGTTTCAAGAGGCAAGGTGTCCAAGGATG...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305747.11
CDS-3UTR GCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTGCTGAACGAGACTCTTaGACTGGGTTTTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSAERDS*TGFCLL
Trigger: GAGCAAGCAAAACCCAGTGCAAGAGTCTCGTTCAGC...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTCATCTCAATAGTTGCTaGTCCCTGGTTTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSHLNSC*SLVSRP
Trigger: TGGCCTGGAAACCAGGGAGCAGCAACTATTGAGATG...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTAACCATCTCAATAGTTaGTGCTCCCTGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSNHLNS*CSLVSR
Trigger: CCTGGAAACCAGGGAGCAGCAACTATTGAGATGGTT...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAACTATGGCGCACGGTTTaGCTACAAATCTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQLWRTV*LQISRR
Trigger: TCTTCGAGAGATTTGTAGCCAAACCGTGCGCCATAG...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAAGACCTTTTCCAGAATaGCATTGGGCGGAGCAATTT +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVRPFPE*HWAEQF
Trigger: AAATTGCTCCGCCCAATGCCATTCTGGAAAAGGTCT...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCCTCGTCAGCGTGCTTaGCTTCTCCTGATTGCGTCT +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYPRQRA*LLLIAS
Trigger: AGACGCAATCAGGAGAAGCCAAGCACGCTGACGAGG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGACCTCGTCAGCGTGCTTaGCTTCTCCTGATTGCGTCT +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRPRQRA*LLLIAS
Trigger: AGACGCAATCAGGAGAAGCCAAGCACGCTGACGAGG...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTCACTTCGATCATCCTTaGACACCTTGCCTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLHFDHP*TPCLLK
Trigger: TTTCAAGAGGCAAGGTGTCCAAGGATGATCGAAGTG...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305747.11
CDS-3UTR CCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGGTGGTTGTCGCAGTGTaGGGATTCTTTCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQVVVAV*GFFPGG
Trigger: ACCTCCGGGAAAGAATCCCCACACTGCGACAACCAC...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGCACTGGTCCCATTGGTaGTTGTCGCAGTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQHWSHW*LSQCGD
Trigger: ATCCCCACACTGCGACAACCACCAATGGGACCAGTG...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATACCACTGGTCCCATTaGTGGTTGTCGCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRYHWSH*WLSQCG
Trigger: CCCACACTGCGACAACCACCAATGGGACCAGTGGTA...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTTCAGGAGATACCCGTTaGTACCACTGGTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSSGDTR*YHWSHW
Trigger: CCAATGGGACCAGTGGTACCAACGGGTATCTCCTGA...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAGTAATTAATCATCCATaGAGCAGGAGCCAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVVINHP*SRSQSG
Trigger: TCCTGACTGGCTCCTGCTCCATGGATGATTAATTAC...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAAGGATACGCACTCTCTaGTGTTTCTGCACGCTTGTT +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQRIRTL*CFCTLV
Trigger: AACAAGCGTGCAGAAACACCAGAGAGTGCGTATCCT...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAAACCTTCACTGGCTCTaGGGACTGCAATATCTTCAT +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVNLHWL*GLQYLH
Trigger: ATGAAGATATTGCAGTCCCCAGAGCCAGTGAAGGTT...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTGGGGTCTCAGCATGTaGTCATGTGGTAATGCATTC +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSWGLSM*SCGNAF
Trigger: GAATGCATTACCACATGACCACATGCTGAGACCCCA...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTAGTGAAGGTCAGTTGTaGGTGGCTGATAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSSEGQL*VADRGS
Trigger: ACTACCCCTATCAGCCACTCACAACTGACCTTCACT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACGGACACCTTGCCTCTTaGAACAGCTTTGCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHGHLAS*NSFASY
Trigger: ATAGCTTGCAAAGCTGTTTCAAGAGGCAAGGTGTCC...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305747.11
CDS-3UTR TCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTCTAGCTCACACCCATTaGAGAAATCTTGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSLAHTH*RNLGCV
Trigger: CACACAGCCAAGATTTCTTCAATGGGTGTGAGCTAG...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTGACGACTGTGTGAAGTaGATGCCATCAGTTAGAGAG +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSDDCVK*MPSVRE
Trigger: CTCTCTAACTGATGGCATTCACTTCACACAGTCGTC...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACGACGACTGTGTGAAGTaGATGCCATCAGTTAGAGAG +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHDDCVK*MPSVRE
Trigger: CTCTCTAACTGATGGCATTCACTTCACACAGTCGTC...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTCTCCACCAAATACTCTaGATGGAAAGTTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLLHQIL*MESLAT
Trigger: TGTTGCCAAACTTTCCATTCAGAGTATTTGGTGGAG...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTCCTTTCTACCTAAGATaGAGGCATTTAGTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFPFYLR*RHLVCS
Trigger: TGAGCAAACTAAATGCCTTCATCTTAGGTAGAAAGG...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACGCGGCTTGTGACAACTaGACTGCTGATTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHAACDN*TADYSF
Trigger: GAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGC...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTACACTACGGGGTACTTTaGCAATGGCACAATTTCATT +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVHYGVL*QWHNFI
Trigger: AATGAAATTGTGCCATTGTCAAAGTACCCCGTAGTG...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCCTAAAATGTGGCCAGTaGACCAGTCAGTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: IPLCTLGRFECDQEGGDILKCGQ*TSQCSS
Trigger: TGATGAGCACTGACTGGTTCACTGGCCACATTTTAG...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTGGCTGTGGAGGTAAATaGCTATGTGGGCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSGCGGK*LCGQRV
Trigger: AACTCTTTGCCCACATAGTCATTTACCTCCACAGCC...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTAGATCCCTGCCATCTTaGTTTGTCCACTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSRSLPS*FVHSCP
Trigger: AGGACAGGAGTGGACAAAGCAAGATGGCAGGGATCT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGAGAACCTCGTCAGCGTaGTTGGCTTCTCCTGATTGC +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQRTSSA*LASPDC
Trigger: GCAATCAGGAGAAGCCAAGCACGCTGACGAGGTTCT...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGAAGAACCTCGTCAGCGTaGTTGGCTTCTCCTGATTGC +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRRTSSA*LASPDC
Trigger: GCAATCAGGAGAAGCCAAGCACGCTGACGAGGTTCT...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAATGAAAATCTCCACATaGTCTCACAGAACCTCGTCA +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVMKIST*SHRTSS
Trigger: TGACGAGGTTCTGTGAGAGCATGTGGAGATTTTCAT...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTTTCCATACAAGTTACTaGAACTGCCATGTGATCACT +
Preference number: 4 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFFHTSY*NCHVIT
Trigger: AGTGATCACATGGCAGTTGCAGTAACTTGTATGGAA...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCATCTCAATAGTTGCTaGTCCCTGGTTTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSHLNSC*SLVSRP
Trigger: TGGCCTGGAAACCAGGGAGCAGCAACTATTGAGATG...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTTCCACTTCCCAGCCTTaGCTCTTGAAACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSSTSQP*LLKQLC
Trigger: GCAAAGCTGTTTCAAGAGGCAAGGCTGGGAAGTGGA...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392687.4
CDS-3UTR CCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTTTTCCAGAATGGCATTaGGCGGAGCAATTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSFPEWH*AEQFVV
Trigger: GACCACAAATTGCTCCGCCCAATGCCATTCTGGAAA...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGTCAGGAGATACCCGTTaGTACCACTGGTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQSGDTR*YHWSHW
Trigger: CCAATGGGACCAGTGGTACCAACGGGTATCTCCTGA...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAGTAATTAATCATCCATaGAGCAGGAGCCAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQVINHP*SRSQSG
Trigger: TCCTGACTGGCTCCTGCTCCATGGATGATTAATTAC...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTACGAGACTCTTGCACTaGGTTTTGCTTGCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSTRLLH*VLLALS
Trigger: ACTTAGAGCAAGCAAAACCCAGTGCAAGAGTCTCGT...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCAGGATACGCACTCTCTaGTGTTTCTGCACGCTTGTT +
Preference number: 4 (lower is better)
Translates to: IPLCTLGRFECDQEGGDIRIRTL*CFCTLV
Trigger: AACAAGCGTGCAGAAACACCAGAGAGTGCGTATCCT...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTACTTATCAGGCTACCATaGGAAAGCTATAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVLIRLP*ESYRQR
Trigger: TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAG...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTTTCAAAGCTATGGCCTaGTACAGGGGGAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSFKAMA*YRGRMR
Trigger: TCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTGTTTGGCAACAGAACTaGACATGTGGAGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSVWQQN*TCGGSP
Trigger: TGGTGAACCTCCACATGTCCAGTTCTGTTGCCAAAC...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAAAAAGAAACCTTCACTaGCTCTGGGGACTGCAATAT +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVKRNLH*LWGLQY
Trigger: ATATTGCAGTCCCCAGAGCCAGTGAAGGTTTCTTTT...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTCAAGTTGGAAATACCTaGAAAAGACCAAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLQVGNT*KRPSFS
Trigger: GGAGAAGCTTGGTCTTTTCCAGGTATTTCCAACTTG...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTAAATGTGAATGGTTCTaGGCAGGATACGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSKCEWF*AGYALS
Trigger: AGAGAGTGCGTATCCTGCTCAGAACCATTCACATTT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACAAATGTGAATGGTTCTaGGCAGGATACGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHKCEWF*AGYALS
Trigger: AGAGAGTGCGTATCCTGCTCAGAACCATTCACATTT...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACGTTAATTTTAGCCATTaGGAGGACTTGCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHVNFSH*EDLPQT
Trigger: TGTCTGGGGCAAGTCCTCTCAATGGCTAAAATTAAC...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACGGTACAGGGGGAGGATaGGATACTGCACATATTTTT +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHGTGGG*DTAHIF
Trigger: AAAAATATGTGCAGTATCTCATCCTCCCCCTGTACC...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCAAAGGCTTTGGGTTaGACTCAAGTTGGAAATACC +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSSKALG*TQVGNT
Trigger: GGTATTTCCAACTTGAGTTCAACCCAAAGCCTTTGA...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTGAGGCTGAAGGAATGTaGGTGCATGAGATAAGCAAG +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSEAEGM*VHEISK
Trigger: CTTGCTTATCTCATGCACTCACATTCCTTCAGCCTC...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGCCCAGCCTTGCCTCTTaGAACAGCTTTGCAAGCTAT +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQPSLAS*NSFASY
Trigger: ATAGCTTGCAAAGCTGTTTCAAGAGGCAAGGCTGGG...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392687.4
CDS-3UTR GCA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCTATGCTGGCCTTAGGTaGTCTTATGACCTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: IPLCTLGRFECDQEGGDIYAGLR*SYDLCL
Trigger: TAAGCACAGGTCATAAGAGCACCTAAGGCCAGCATA...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTAGAGTTGCTTCCCTATaGTCAACATCCATAGGACCA +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSRVASL*STSIGP
Trigger: TGGTCCTATGGATGTTGAGCATAGGGAAGCAACTCT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACCATGTACTATCTGGCTaGAGAGACTTTCTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHHVLSG*RDFLRS
Trigger: GGACCTAAGAAAGTCTCTGCAGCCAGATAGTACATG...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTAACCATCTCAATAGTTaGTGCTCCCTGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSNHLNS*CSLVSR
Trigger: CCTGGAAACCAGGGAGCAGCAACTATTGAGATGGTT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACGGGCGGAGCAATTTGTaGTCCATTGGCCTGAATGTT +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYGRSNL*SIGLNV
Trigger: AACATTCAGGCCAATGGACCACAAATTGCTCCGCCC...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTCATAATTTGCCATTTTaGCAGCCTCCAGAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSHNLPF*QPPEEH
Trigger: ATGCTCTTCTGGAGGCTGCCAAAATGGCAAATTATG...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTCCATTGAAGAAATCTTaGCTGTGTGCACAAGAAATG +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLPLKKS*LCAQEM
Trigger: CATTTCTTGTGCACACAGCCAAGATTTCTTCAATGG...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTGGCAAGTGCAGTAACTaGGCTCATTGCATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSGKCSN*AHCIFS
Trigger: AGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCC...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTCAAGTTGGAAATACCTaGAAAAGACCAAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSQVGNT*KRPSFS
Trigger: GGAGAAGCTTGGTCTTTTCCAGGTATTTCCAACTTG...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTGGCTTTATGAAACTTTaGGAAATCAAACTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFGFMKL*EIKLRG
Trigger: ACCTCTGAGTTTGATTTCCCAAAGTTTCATAAAGCC...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 72 bp AAAACAAGCATCAGATACACTACCTCTAAGTATTTATaGGAGGGGTTCCAACAGCCTCGTGGACAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KTSIRYTTSKYL*EGFQQPRGQAF
Trigger: GAAGGCCTGTCCACGAGGCTGTTGGAACCCCTCCAATAAATACTTAGAGGTAGTGTATCTGATGCTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACACATTGGCCTGAATGTTaGGGGCTATGGCGCACGGTT +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTHWPEC*GLWRTV
Trigger: AACCGTGCGCCATAGCCCTCAACATTCAGGCCAATG...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTGGTGCTGAGATATTATaGAAGGAACTGCATTTGCAA +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSGAEIL*KELHLQ
Trigger: TTGCAAATGCAGTTCCTTTCATAATATCTCAGCACC...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTGTTAATTTTAGCCATTaGGAGGACTTGCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSVNFSH*EDLPQT
Trigger: TGTCTGGGGCAAGTCCTCTCAATGGCTAAAATTAAC...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACTGCTCGAGTGTCATATaGTCTAAACCTGAACACATG +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHCSSVI*SKPEHM
Trigger: CATGTGTTCAGGTTTAGATCATATGACACTCGAGCA...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGAGTGTGGGTGTACAACTaGTCCACAAGCTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRVWVYN*STSYWE
Trigger: TTCCCAATAGCTTGTGGATCAGTTGTACACCCACAC...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTAGCTTAGGGGCTTTATaGAACTTTGGGAAATCAAAC +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSSLGAL*NFGKSN
Trigger: GTTTGATTTCCCAAAGTTTCATAAAGCCCCTAAGCT...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACACCACCACCCCTTCTATaGCAACAAACGGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTPPPLL*QQTAVE
Trigger: CTCCACAGCCGTTTGTTGTCATAGAAGGGGTGGTGG...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTATGAAAATCTCCACATaGTCTCACAGAACCTCGTCA +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSMKIST*SHRTSS
Trigger: TGACGAGGTTCTGTGAGAGCATGTGGAGATTTTCAT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTACAATTACATACAGCATaGCTACAAAGAGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVQLHTA*LQRENG
Trigger: ACCATTCTCTCTTTGTAGGCATGCTGTATGTAATTG...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTATTTTATCTCACTTCTTaGCTAACCTTTCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVFYLTS*LTFLAS
Trigger: AGAAGCCAGAAAGGTTAGGCAAGAAGTGAGATAAAA...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGACATGGTAGTGGCAAGTaGAGTAACTGGGCTCATTGC +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRHGSGK*SNWAHC
Trigger: GCAATGAGCCCAGTTACTGCACTTGCCACTACCATG...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAACTGGCTCTGGGGACTaGAATATCTTCATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVTGSGD*NIFILK
Trigger: TTTTAAAATGAAGATATTGCAGTCCCCAGAGCCAGT...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTCCTCATAATAATGATTaGTTCCAGAGATCAAGAATG +
Preference number: 4 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFPHNND*FQRSRM
Trigger: CATTCTTGATCTCTGGAAGCAATCATTATTATGAGG...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACATGCTCATAGCACATTaGACTACAGCAAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHMLIAH*TTARER
Trigger: CCTTTCTCTTGCTGTAGTCCAATGTGCTATGAGCAT...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTTCGTCCGGTTTAAATaGTCACTAAGACTGTATAGG +
Preference number: 4 (lower is better)
Translates to: GYALSGVSARLLAFLLLSFVRFK*SLRLYR
Trigger: CCTATACAGTCTTAGTGACCATTTAAACCGGACGAA...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAACCATTGAAGAAATCTTaGCTGTGTGCACAAGAAATG +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQPLKKS*LCAQEM
Trigger: CATTTCTTGTGCACACAGCCAAGATTTCTTCAATGG...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACGGTAGTGGCAAAACCTaGCTGAAATCAGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYGSGKT*LKSVAL
Trigger: GAGAGCAACTGATTTCAGCCAGGTTTTGCCACTACC...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTTACCCCTTTGTACTCTaGGAAGGTTTGAATGTGACC +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSYPFVL*EGLNVT
Trigger: GGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTA...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTGATGCTAATAAACCCTaGGGTAAAGCAGCAATCATC +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSDANKP*GKAAII
Trigger: GATGATTGCTGCTTTACCCCAGGGTTTATTAGCATC...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTACAGAACTGGACATGTaGAGGTTCACCAACCATTTT +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSTELDM*RFTNHF
Trigger: AAAATGGTTGGTGAACCTCCACATGTCCAGTTCTGT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGGTTTGGCAACAGAACTaGACATGTGGAGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQVWQQN*TCGGSP
Trigger: TGGTGAACCTCCACATGTCCAGTTCTGTTGCCAAAC...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACGATTGGGGACAATTGTaGGTGTCTATAAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHDWGQL*VSIKLS
Trigger: AGAGAGCTTTATAGACACCCACAATTGTCCCCAATC...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAGTGCTTGGCTTCTCCTaGTTGCGTCTTTGTCGAAAC +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLVLGFS*LRLCRN
Trigger: GTTTCGACAAAGACGCAATCAGGAGAAGCCAAGCAC...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCAGAAGAGCATCAGCTaGATCATGAAGACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYQKSIS*IMKTKD
Trigger: GTCCTTTGTCTTCATGATTCAGCTGATGCTCTTCTG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTTTTGCTTGCTCTAAGTaGCAAAGTAAGCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSFACSK*QSKLML
Trigger: GAGCATCAGCTTACTTTGTCACTTAGAGCAAGCAAA...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAAACTATGAGCTTCAGTaGATATCCTCCTTCAAAATC +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQNYELQ*ISSFKI
Trigger: GATTTTGAAGGAGGATATTCACTGAAGCTCATAGTT...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTGATAGGGCTTTTTCTTaGAAGCTGGTTGCATTAAAG +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSDRAFS*KLVALK
Trigger: CTTTAATGCAACCAGCTTTCAAGAAAAAGCCCTATC...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGACTAAAATGTGGCCAGTaGACCAGTCAGTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRLKCGQ*TSQCSS
Trigger: TGATGAGCACTGACTGGTTCACTGGCCACATTTTAG...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGAGAGGCTGAAGGAATGTaGGTGCATGAGATAAGCAAG +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQREAEGM*VHEISK
Trigger: CTTGCTTATCTCATGCACTCACATTCCTTCAGCCTC...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACATTTCATTCCATTTCTaGCAGAGATGCTCAAGCACT +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHISFHF*QRCSST
Trigger: AGTGCTTGAGCATCTCTGTCAGAAATGGAATGAAAT...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCATTTCATTCCATTTCTaGCAGAGATGCTCAAGCACT +
Preference number: 4 (lower is better)
Translates to: IPLCTLGRFECDQEGGDIISFHF*QRCSST
Trigger: AGTGCTTGAGCATCTCTGTCAGAAATGGAATGAAAT...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAACTCTTTTCATCAGGATaGTTTGTAATTGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQLFSSG*FVIAVK
Trigger: CTTCACTGCAATTACAAAGCATCCTGATGAAAAGAG...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAGAAATCTTGGCTGTGTaGACAAGAAATGAAATCTAT +
Preference number: 4 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVEILAV*TRNEIY
Trigger: ATAGATTTCATTTCTTGTGCACACAGCCAAGATTTC...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCTTCTTGAAAGCTGGTTaGATTAAAGTGCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: IPLCTLGRFECDQEGGDIFLKAG*IKVLCT
Trigger: AGTGCAGAGCACTTTAATGCAACCAGCTTTCAAGAA...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCTGCTCTTATGACCTGTaGTTAGCCATATTTAGCTCA +
Preference number: 4 (lower is better)
Translates to: IPLCTLGRFECDQEGGDICSYDL*LAIFSS
Trigger: TGAGCTAAATATGGCTAAGCACAGGTCATAAGAGCA...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATATGCTGGCCTTAGGTaGTCTTATGACCTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRYAGLR*SYDLCL
Trigger: TAAGCACAGGTCATAAGAGCACCTAAGGCCAGCATA...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGAAGAGTTGCTTCCCTATaGTCAACATCCATAGGACCA +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRRVASL*STSIGP
Trigger: TGGTCCTATGGATGTTGAGCATAGGGAAGCAACTCT...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACTTCCATACAAGTTACTaGAACTGCCATGTGATCACT +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHFHTSY*NCHVIT
Trigger: AGTGATCACATGGCAGTTGCAGTAACTTGTATGGAA...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAAGTAACTGGGCTCATTaGATTTTCTCTTTCCATACA +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQSNWAH*IFSFHT
Trigger: TGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACT...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGACATGTACTATCTGGCTaGAGAGACTTTCTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRHVLSG*RDFLRS
Trigger: GGACCTAAGAAAGTCTCTGCAGCCAGATAGTACATG...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGAGGGCAATCTCCAGAATaGCTAGTTTTGTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRGQSPE*LVLWRH
Trigger: GTGTCTCCACAAAACTAGGCATTCTGGAGATTGCCC...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAAAAATAGATACAAGGTaGTGCAGGAACATAATGCCA +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQKIDTR*CRNIMP
Trigger: TGGCATTATGTTCCTGCACCACCTTGTATCTATTTT...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTAGCTTTCAAATAATGTaGTATTTAACACCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLSFQIM*YLTPRE
Trigger: CTCTCTGGGTGTTAAATACCACATTATTTGAAAGCT...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGACCCGTTGGTACCACTaGTCCCATTGGTGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLTRWYH*SHWWLS
Trigger: CGACAACCACCAATGGGACCAGTGGTACCAACGGGT...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTACAGAACTGGACATGTaGAGGTTCACCAACCATTTT +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSTELDM*RFTNHF
Trigger: AAAATGGTTGGTGAACCTCCACATGTCCAGTTCTGT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAACCAAATACTCTGAATaGAAAGTTTGGCAACAGAAC +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQTKYSE*KVWQQN
Trigger: GTTCTGTTGCCAAACTTTCCATTCAGAGTATTTGGT...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGAGGCAAGTGCAGTAACTaGGCTCATTGCATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRGKCSN*AHCIFS
Trigger: AGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCC...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACAACCTTCACTGGCTCTaGGGACTGCAATATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYNLHWL*GLQYLH
Trigger: ATGAAGATATTGCAGTCCCCAGAGCCAGTGAAGGTT...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGACACTTCGATCATCCTTaGACACATGTAAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRHFDHP*THVKGS
Trigger: GGAACCCTTTACATGTGTCCAAGGATGATCGAAGTG...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392687.4
CDS-3UTR TCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGACAGAAGAGCATCAGCTaGATCATGAAGACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRQKSIS*IMKTKD
Trigger: GTCCTTTGTCTTCATGATTCAGCTGATGCTCTTCTG...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCTCCACCAAATACTCTaGATGGAAAGTTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYLHQIL*MESLAT
Trigger: TGTTGCCAAACTTTCCATTCAGAGTATTTGGTGGAG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTAAGCTAATCAGAACCTaGAGACCTGAAATACCACAT +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSKLIRT*RPEIPH
Trigger: ATGTGGTATTTCAGGTCTTCAGGTTCTGATTAGCTT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAGCGGCTTGTGACAACTaGACTGCTGATTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLAACDN*TADYSF
Trigger: GAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGC...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCACTACGGGGTACTTTaGCAATGGCACAATTTCATT +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYHYGVL*QWHNFI
Trigger: AATGAAATTGTGCCATTGTCAAAGTACCCCGTAGTG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACTGTGGCCTATTATTATaGAGAACTAAAATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHCGLLL*RTKMWP
Trigger: TGGCCACATTTTAGTTCTTCATAATAATAGGCCACA...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTTGTGGCCTATTATTATaGAGAACTAAAATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSCGLLL*RTKMWP
Trigger: TGGCCACATTTTAGTTCTTCATAATAATAGGCCACA...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACTCAAAGGCTTTGGGTTaGACTCAAGTTGGAAATACC +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYSKALG*TQVGNT
Trigger: GGTATTTCCAACTTGAGTTCAACCCAAAGCCTTTGA...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGAGGAATGTGAGTGCATaGGATAAGCAAGACAGATCT +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQRNVSA*DKQDRS
Trigger: AGATCTGTCTTGCTTATCTCATGCACTCACATTCCT...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAGTGTGGGTGTACAACTaGTCCACAAGCTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLVWVYN*STSYWE
Trigger: TTCCCAATAGCTTGTGGATCAGTTGTACACCCACAC...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTAGCTTAGGGGCTTTATaGAACTTTGGGAAATCAAAC +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSSLGAL*NFGKSN
Trigger: GTTTGATTTCCCAAAGTTTCATAAAGCCCCTAAGCT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTCAATTACATACAGCATaGCTACAAAGAGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSQLHTA*LQRENG
Trigger: ACCATTCTCTCTTTGTAGGCATGCTGTATGTAATTG...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACTTTTATCTCACTTCTTaGCTAACCTTTCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHFYLTS*LTFLAS
Trigger: AGAAGCCAGAAAGGTTAGGCAAGAAGTGAGATAAAA...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGCATAATTTGCCATTTTaGCAGCCTCCAGAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQHNLPF*QPPEEH
Trigger: ATGCTCTTCTGGAGGCTGCCAAAATGGCAAATTATG...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGATGCTCATAGCACATTaGACTACAGCAAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQMLIAH*TTARER
Trigger: CCTTTCTCTTGCTGTAGTCCAATGTGCTATGAGCAT...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTTTCGTCCGGTTTAAATaGTCACTAAGACTGTATAGG +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSFVRFK*SLRLYR
Trigger: CCTATACAGTCTTAGTGACCATTTAAACCGGACGAA...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGATACCCCTTTGTACTCTaGGAAGGTTTGAATGTGACC +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRYPFVL*EGLNVT
Trigger: GGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTA...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAAAGTATTACTTCTTCTaGAATCCTTTCTACATACCC +
Preference number: 4 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQKYYFF*NPFYIP
Trigger: GGGTATGTAGAAAGGATTCCAGAAGAAGTAATACTT...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTTTGACTAGATGCCTGTaGCATTATATAATGATGCAG +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSLTRCL*HYIMMQ
Trigger: CTGCATCATTATATAATGCCACAGGCATCTAGTCAA...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACACCTCACATCCCTTTCTaGGCAATCTCCAGAATGCCT +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTPHIPF*AISRMP
Trigger: AGGCATTCTGGAGATTGCCCAGAAAGGGATGTGAGG...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 72 bp TCTCACTTCTTGCCTAACCTTTCTGGCTTCTTTACCTaGACTAGATGCCTGTGGCATTATATAATGATGCAG +
Preference number: 4 (lower is better)
Translates to: SHFLPNLSGFFT*TRCLWHYIMMQ
Trigger: CTGCATCATTATATAATGCCACAGGCATCTAGTCAAGGTAAAGAAGCCAGAAAGGTTAGGCAAGAAGTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 72 bp ATGCATTCCTTTCAAAGGCTTTGGGTTGAACTCAAGTaGGAAATACCTGGAAAAGACCAAGCTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: MHSFQRLWVELK*EIPGKDQASPL
Trigger: CAAAGGAGAAGCTTGGTCTTTTCCAGGTATTTCCAACTTGAGTTCAACCCAAAGCCTTTGAAAGGAATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGATTTGCTTGCTCTAAGTaGCAAAGTAAGCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRFACSK*QSKLML
Trigger: GAGCATCAGCTTACTTTGTCACTTAGAGCAAGCAAA...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGAGATAGGGCTTTTTCTTaGAAGCTGGTTGCATTAAAG +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRDRAFS*KLVALK
Trigger: CTTTAATGCAACCAGCTTTCAAGAAAAAGCCCTATC...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTGTAGGGATGAGTCAGTaGTATTTTGGTTTTATCACT +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSVGMSQ*YFGFIT
Trigger: AGTGATAAAACCAAAATATCACTGACTCATCCCTAC...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCCAAATTTGGAAAGGTaGACTGTAGTTGGCTTATAT +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSPNLER*TVVGLY
Trigger: ATATAAGCCAACTACAGTTCACCTTTCCAAATTTGG...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTAATAATCCAAAATACTaGGAGTTGCTTCCCTATGCT +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSNNPKY*ELLPYA
Trigger: AGCATAGGGAAGCAACTCTCAGTATTTTGGATTATT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCCTTTCTACCTAAGATaGAGGCATTTAGTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYPFYLR*RHLVCS
Trigger: TGAGCAAACTAAATGCCTTCATCTTAGGTAGAAAGG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCCAAAGGATTTCTTaGAGCCTCTCTGGAGATAAT +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRFQRIS*SLSGDN
Trigger: ATTATCTCCAGAGAGGCTTCAAGAAATCCTTTGGAA...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGTTCCAAAGGATTTCTTaGAGCCTCTCTGGAGATAAT +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQFQRIS*SLSGDN
Trigger: ATTATCTCCAGAGAGGCTTCAAGAAATCCTTTGGAA...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACATAGATACAAGGTGGTaGAGGAACATAATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYIDTRW*RNIMPK
Trigger: CTTTGGCATTATGTTCCTGCACCACCTTGTATCTAT...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGAAAACTTGGCATAATTTaGCATTTTGGCAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRKLGII*HFGSLQ
Trigger: CTGGAGGCTGCCAAAATGGCAAATTATGCCAAGTTT...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACCTCTTGAAACAGCTTTaGAAGCTATTTTCACAATCA +
Preference number: 4 (lower is better)
Translates to: CFCTLVSISAVVFTALIHLLKQL*KLFSQS
Trigger: TGATTGTGAAAATAGCTTGCAAAGCTGTTTCAAGAG...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTAAGACAGTACAAATaGAAATACTGTTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSLRQYK*KYCSLV
Trigger: CACAAGGGAACAGTATTTGCATTTGTACTGTCTTAG...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTGAAATCTTGGCTGTGTaGACAAGAAATGAAATCTAT +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSEILAV*TRNEIY
Trigger: ATAGATTTCATTTCTTGTGCACACAGCCAAGATTTC...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGTTCTTGAAAGCTGGTTaGATTAAAGTGCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQFLKAG*IKVLCT
Trigger: AGTGCAGAGCACTTTAATGCAACCAGCTTTCAAGAA...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACACTATGGCGCACGGTTTaGCTACAAATCTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTLWRTV*LQISRR
Trigger: TCTTCGAGAGATTTGTAGCCAAACCGTGCGCCATAG...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAAAGGTCAGTTGTGAGTaGCTGATAGGGGTAGTTGTA +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLKVSCE*LIGVVV
Trigger: TACAACTACCCCTATCAGCCACTCACAACTGACCTT...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAACGAGACTCTTGCACTaGGTTTTGCTTGCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLTRLLH*VLLALS
Trigger: ACTTAGAGCAAGCAAAACCCAGTGCAAGAGTCTCGT...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGACTTATCAGGCTACCATaGGAAAGCTATAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRLIRLP*ESYRQR
Trigger: TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAG...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGTACACTTCAAAGCTATaGCCTGGTACAGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLYTSKL*PGTGGG
Trigger: TCCTCCCCCTGTACCAGGCCATAGCTTTGAAGTGTA...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTAAGTATTACTTCTTCTaGAATCCTTTCTACATACCC +
Preference number: 4 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSKYYFF*NPFYIP
Trigger: GGGTATGTAGAAAGGATTCCAGAAGAAGTAATACTT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTACCAAATACTCTGAATaGAAAGTTTGGCAACAGAAC +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSTKYSE*KVWQQN
Trigger: GTTCTGTTGCCAAACTTTCCATTCAGAGTATTTGGT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACAACCAAGCTTCTCCTTTaGGTGTCTGCGGATCCTATT +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTTKLLL*VSADPI
Trigger: AATAGGATCCGCAGACACCCAAAGGAGAAGCTTGGT...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGAGAATGCCTAGTTTTGTaGAGACACCATGTACTATCT +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRECLVL*RHHVLS
Trigger: AGATAGTACATGGTGTCTCCACAAAACTAGGCATTC...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGCTAGCTCACACCCATTaGAGAAATCTTGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLLAHTH*RNLGCV
Trigger: CACACAGCCAAGATTTCTTCAATGGGTGTGAGCTAG...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGAACTATGAGCTTCAGTaGATATCCTCCTTCAAAATC +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQNYELQ*ISSFKI
Trigger: GATTTTGAAGGAGGATATTCACTGAAGCTCATAGTT...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACGTAGGGATGAGTCAGTaGTATTTTGGTTTTATCACT +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYVGMSQ*YFGFIT
Trigger: AGTGATAAAACCAAAATATCACTGACTCATCCCTAC...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGCACTGGCTAAGAGGCTaGAAAGATTCTACCACCTTC +
Preference number: 4 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLHWLRG*KDSTTF
Trigger: GAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTG...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCCAAATTTGGAAAGGTaGACTGTAGTTGGCTTATAT +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYPNLER*TVVGLY
Trigger: ATATAAGCCAACTACAGTTCACCTTTCCAAATTTGG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACAATAATCCAAAATACTaGGAGTTGCTTCCCTATGCT +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYNNPKY*ELLPYA
Trigger: AGCATAGGGAAGCAACTCTCAGTATTTTGGATTATT...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGATTAATGCAACATCATaGAGAGATTGGGGACAATTG +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQINATS*RDWGQL
Trigger: CAATTGTCCCCAATCTCTTCATGATGTTGCATTAAT...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGAGAGATGCTCAAGCACTaGATTGTCTTAAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKREMLKH*IVLRKQ
Trigger: TTGTTTTCTTAAGACAATTCAGTGCTTGAGCATCTC...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAAAACTTGGCATAATTTaGCATTTTGGCAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLKLGII*HFGSLQ
Trigger: CTGGAGGCTGCCAAAATGGCAAATTATGCCAAGTTT...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTACAGGACACATGGCAGTaGACTATTCAAAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLQDTWQ*TIQNAL
Trigger: CAAAGCATTTTGAATAGTGCACTGCCATGTGTCCTG...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAACTCTCTGGTGTTTCTaGACGCTTGTTAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLTLWCF*TLVSIS
Trigger: AGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGT...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACAGTAACTGGGCTCATTaGATTTTCTCTTTCCATACA +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYSNWAH*IFSFHT
Trigger: TGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACT...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACAAGACCTTTTCCAGAATaGCATTGGGCGGAGCAATTT +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTRPFPE*HWAEQF
Trigger: AAATTGCTCCGCCCAATGCCATTCTGGAAAAGGTCT...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTAGCTTTCAAATAATGTaGTATTTAACACCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSSFQIM*YLTPRE
Trigger: CTCTCTGGGTGTTAAATACCACATTATTTGAAAGCT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAGATGCTAATAAACCCTaGGGTAAAGCAGCAATCATC +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLDANKP*GKAAII
Trigger: GATGATTGCTGCTTTACCCCAGGGTTTATTAGCATC...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGATCTGAATGGAAAGTTTaGCAACAGAACTGGACATGT +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRSEWKV*QQNWTC
Trigger: ACATGTCCAGTTCTGTTGCCAAACTTTCCATTCAGA...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAAAAAGAAACCTTCACTaGCTCTGGGGACTGCAATAT +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLKRNLH*LWGLQY
Trigger: ATATTGCAGTCCCCAGAGCCAGTGAAGGTTTCTTTT...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGGGCTTTATGAAACTTTaGGAAATCAAACTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQGFMKL*EIKLRG
Trigger: ACCTCTGAGTTTGATTTCCCAAAGTTTCATAAAGCC...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 72 bp GATTGGGGACAATTGTGGGTGTCTATAAAGCTCTCTTaGAAAAGCTCTTTAAAGCGAACTCAGGTAAATGGA +
Preference number: 4 (lower is better)
Translates to: DWGQLWVSIKLS*KSSLKRTQVNG
Trigger: TCCATTTACCTGAGTTCGCTTTAAAGAGCTTTTCAAAGAGAGCTTTATAGACACCCACAATTGTCCCCAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGGTGGCAAAACCTGGCTaGAATCAGTTGCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLVAKPG*NQLLSL
Trigger: TAAAGAGAGCAACTGATTTCAGCCAGGTTTTGCCAC...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACATGCTCGAGTGTCATATaGTCTAAACCTGAACACATG +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTCSSVI*SKPEHM
Trigger: CATGTGTTCAGGTTTAGATCATATGACACTCGAGCA...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGACTCTTTTCATCAGGATaGTTTGTAATTGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRLFSSG*FVIAVK
Trigger: CTTCACTGCAATTACAAAGCATCCTGATGAAAAGAG...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAATAGATACAAGGTGGTaGAGGAACATAATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLIDTRW*RNIMPK
Trigger: CTTTGGCATTATGTTCCTGCACCACCTTGTATCTAT...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGCTCTTGAAACAGCTTTaGAAGCTATTTTCACAATCA +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQLLKQL*KLFSQS
Trigger: TGATTGTGAAAATAGCTTGCAAAGCTGTTTCAAGAG...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGACAAATAGTTCACTTTaGTTGGGACTTGTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQTNSSL*LGLVVL
Trigger: CAAAACTACAAGTCCCAAGCAAAGTGAACTATTTGT...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACACAGGACACATGGCAGTaGACTATTCAAAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTQDTWQ*TIQNAL
Trigger: CAAAGCATTTTGAATAGTGCACTGCCATGTGTCCTG...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACAACTCTCTGGTGTTTCTaGACGCTTGTTAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTTLWCF*TLVSIS
Trigger: AGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGT...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACTTTACCTTGACTAGATaGCTGTGGCATTATATAATG +
Preference number: 4 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYFTLTR*LWHYIM
Trigger: CATTATATAATGCCACAGGCATCTAGTCAAGGTAAA...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTTACCTTGACTAGATaGCTGTGGCATTATATAATG +
Preference number: 4 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRFTLTR*LWHYIM
Trigger: CATTATATAATGCCACAGGCATCTAGTCAAGGTAAA...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGAACTGGCTCTGGGGACTaGAATATCTTCATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRTGSGD*NIFILK
Trigger: TTTTAAAATGAAGATATTGCAGTCCCCAGAGCCAGT...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACAAAGCTAATCAGAACCTaGAGACCTGAAATACCACAT +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTKLIRT*RPEIPH
Trigger: ATGTGGTATTTCAGGTCTTCAGGTTCTGATTAGCTT...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTACTAAGACAGTACAAATaGAAATACTGTTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: DSTNANTVPLCQLHTACLLRQYK*KYCSLV
Trigger: CACAAGGGAACAGTATTTGCATTTGTACTGTCTTAG...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACATGCTCTTATGACCTGTaGTTAGCCATATTTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTCSYDL*LAIFSS
Trigger: TGAGCTAAATATGGCTAAGCACAGGTCATAAGAGCA...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACATCTGAATGGAAAGTTTaGCAACAGAACTGGACATGT +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTSEWKV*QQNWTC
Trigger: ACATGTCCAGTTCTGTTGCCAAACTTTCCATTCAGA...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACAGAATGCCTAGTTTTGTaGAGACACCATGTACTATCT +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTECLVL*RHHVLS
Trigger: AGATAGTACATGGTGTCTCCACAAAACTAGGCATTC...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR TCA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGTTCTATTGTACCTGGTaGGTGGGTTTTATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLFYCTW*VGFMKR
Trigger: TCTTTTCATAAAACCCACTCACCAGGTACAATAGAA...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACAACAAATAGTTCACTTTaGTTGGGACTTGTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTTNSSL*LGLVVL
Trigger: CAAAACTACAAGTCCCAAGCAAAGTGAACTATTTGT...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR GCA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACACCTCATAATAATGATTaGTTCCAGAGATCAAGAATG +
Preference number: 4 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTPHNND*FQRSRM
Trigger: CATTCTTGATCTCTGGAAGCAATCATTATTATGAGG...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CCA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGTTGACTAGATGCCTGTaGCATTATATAATGATGCAG +
Preference number: 4 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLLTRCL*HYIMMQ
Trigger: CTGCATCATTATATAATGCCACAGGCATCTAGTCAA...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 72 bp ACACAGGACAAATTCCCATTCTTAACAGTGATTTCCTaGTTTATAACTATGAGCTTCAGTGAATATCCTCCT +
Preference number: 4 (lower is better)
Translates to: TQDKFPFLTVIS*FITMSFSEYPP
Trigger: AGGAGGATATTCACTGAAGCTCATAGTTATAAACAAGGAAATCACTGTTAAGAATGGGAATTTGTCCTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
3UTR CAA 72 bp TTCAAATTAAGAAAACCGCCCAATGTTCAGGCAACTTaGGCATTAACATTTCCAAGAAAGGGACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: FKLRKPPNVQAT*ALTFPRKGQKQ
Trigger: TTGTTTTTGTCCCTTTCTTGGAAATGTTAATGCCAAAGTTGCCTGAACATTGGGCGGTTTTCTTAATTTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS GCA 90 bp GCCGCCGCTGCTCCCGCCCGCCGCCGCCGCCTCCTCCGCGGCCGCTaGTCTCGAAGGCTCGCGGCGAGCCCCGGTTCTCTCCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: AAAAPARRRRLLRGR*SRRLAASPGSLLPL
Trigger: CAGAGGGAGGAGAGAACCGGGGCTCGCCGCGAGCCTTCGAGAGCAGCGGCCGCGGAGGAGGCGGCGGCGGCGGGCGGGAGCAGCGGCGGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392687.4
CDS TCA 90 bp CCTGCGGGAAGGTGGCCTCCTCCGTGTTCTTCAGGTCCGCCCAGGTaGCATTGTGCGGGAGCCAAAACCTCTCGTTCCAGAACCAGGCTA +
Preference number: 5 (lower is better)
Translates to: PAGRWPPPCSSGPPR*HCAGAKTSRSRTRL
Trigger: TAGCCTGGTTCTGGAACGAGAGGTTTTGGCTCCCGCACAATGTCACCTGGGCGGACCTGAAGAACACGGAGGAGGCCACCTTCCCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 90 bp CATCCATGGAGCAGGAGCCAGTCAGGAGATACCCGTTGGTACCACTaGTCCCATTGGTGGTTGTCGCAGTGTGGGGATTCTTTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: HPWSRSQSGDTRWYH*SHWWLSQCGDSFPE
Trigger: CTCCGGGAAAGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCCTGACTGGCTCCTGCTCCATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 90 bp AGGAGCCAGTCAGGAGATACCCGTTGGTACCACTGGTCCCATTGGTaGTTGTCGCAGTGTGGGGATTCTTTCCCGGAGGTTCTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: RSQSGDTRWYHWSHW*LSQCGDSFPEVLSP
Trigger: AGGACTCAGAACCTCCGGGAAAGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCCTGACTGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 90 bp AGCAGGAGCCAGTCAGGAGATACCCGTTGGTACCACTGGTCCCATTaGTGGTTGTCGCAGTGTGGGGATTCTTTCCCGGAGGTTCTGAGT +
Preference number: 5 (lower is better)
Translates to: SRSQSGDTRWYHWSH*WLSQCGDSFPEVLS
Trigger: ACTCAGAACCTCCGGGAAAGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCCTGACTGGCTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 90 bp AGATACCCGTTGGTACCACTGGTCCCATTGGTGGTTGTCGCAGTGTaGGGATTCTTTCCCGGAGGTTCTGAGTCCTCCTCATCTGAGCTA +
Preference number: 5 (lower is better)
Translates to: RYPLVPLVPLVVVAV*GFFPGGSESSSSEL
Trigger: TAGCTCAGATGAGGAGGACTCAGAACCTCCGGGAAAGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 90 bp TGCAGTGAAGACCTTTTCCAGAATGGCATTGGGCGGAGCAATTTGTaGTCCATTGGCCTGAATGTTGAGGGCTATGGCGCACGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: CSEDLFQNGIGRSNL*SIGLNVEGYGARFG
Trigger: GCCAAACCGTGCGCCATAGCCCTCAACATTCAGGCCAATGGACCACAAATTGCTCCGCCCAATGCCATTCTGGAAAAGGTCTTCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCCGCCCAGGTGACATaGTGCGGGAGCCAAAACCTC +
Preference number: 5 (lower is better)
Translates to: GYALSGVSARLLAFLLLSSAQVT*CGSQNL
Trigger: GAGGTTTTGGCTCCCGCACAATGTCACCTGGGCGGA...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS GCA 90 bp TGCTTGGCTTCTCCTGATTGCGTCTTTGTCGAAACCAGCGCTGAATaGTTCGAACATCCCAGTCCAGTTGCTTGGAGAGGCCTTCCAATC +
Preference number: 5 (lower is better)
Translates to: CLASPDCVFVETSAE*FEHPSPVAWRGLPI
Trigger: GATTGGAAGGCCTCTCCAAGCAACTGGACTGGGATGTTCGAAGCATTCAGCGCTGGTTTCGACAAAGACGCAATCAGGAGAAGCCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS GCA 90 bp ACATGCTCTCACAGAACCTCGTCAGCGTGCTTGGCTTCTCCTGATTaGGTCTTTGTCGAAACCAGCGCTGAATGCTTCGAACATCCCAGT +
Preference number: 5 (lower is better)
Translates to: TCSHRTSSACLASPD*VFVETSAECFEHPS
Trigger: ACTGGGATGTTCGAAGCATTCAGCGCTGGTTTCGACAAAGACGCAATCAGGAGAAGCCAAGCACGCTGACGAGGTTCTGTGAGAGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 90 bp GTAATTAATCATCCATGGAGCAGGAGCCAGTCAGGAGATACCCGTTaGTACCACTGGTCCCATTGGTGGTTGTCGCAGTGTGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: VINHPWSRSQSGDTR*YHWSHWWLSQCGDS
Trigger: AGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCCTGACTGGCTCCTGCTCCATGGATGATTAATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACCCCTGCCATCTTGCTTaGTCCACTCCTGTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: CFCTLVSISAVVFTALIHPCHLA*STPVLR
Trigger: CCGCAGGACAGGAGTGGACAAAGCAAGATGGCAGGG...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS TCA 90 bp TTTTCCAGAATGGCATTGGGCGGAGCAATTTGTGGTCCATTGGCCTaGATGTTGAGGGCTATGGCGCACGGTTTGGCTACAAATCTCTCG +
Preference number: 5 (lower is better)
Translates to: FSRMALGGAICGPLA*MLRAMAHGLATNLS
Trigger: CGAGAGATTTGTAGCCAAACCGTGCGCCATAGCCCTCAACATTCAGGCCAATGGACCACAAATTGCTCCGCCCAATGCCATTCTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACACCTCGTCAGCGTGCTaGGCTTCTCCTGATTGCGTC +
Preference number: 5 (lower is better)
Translates to: CFCTLVSISAVVFTALIHTSSAC*ASPDCV
Trigger: GACGCAATCAGGAGAAGCCAAGCACGCTGACGAGGT...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCCCTGCCATCTTGCTTaGTCCACTCCTGTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYPCHLA*STPVLR
Trigger: CCGCAGGACAGGAGTGGACAAAGCAAGATGGCAGGG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTAACATCCCAGTCCAGTaGCTTGGAGAGGCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: GYALSGVSARLLAFLLLSNIPVQ*LGEAFQ
Trigger: TTGGAAGGCCTCTCCAAGCAACTGGACTGGGATGTT...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAGTACTCTGGGAAGGTTaGAATGTGACCAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVVLWEG*NVTRKE
Trigger: CTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTAC...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTATCCCAGCCTTGCCTCTaGAAACAGCTTTGCAAGCTA +
Preference number: 5 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVSQPCL*KQLCKL
Trigger: TAGCTTGCAAAGCTGTTTCAAGAGGCAAGGCTGGGA...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392687.4
CDS GCA 90 bp GGTAAAATGAAAATCTCCACATGCTCTCACAGAACCTCGTCAGCGTaGTTGGCTTCTCCTGATTGCGTCTTTGTCGAAACCAGCGCTGAA +
Preference number: 5 (lower is better)
Translates to: GKMKISTCSHRTSSA*LASPDCVFVETSAE
Trigger: TTCAGCGCTGGTTTCGACAAAGACGCAATCAGGAGAAGCCAAGCACGCTGACGAGGTTCTGTGAGAGCATGTGGAGATTTTCATTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTAGAGATTGGGGACAATaGTGGGTGTCTATAAAGCTC +
Preference number: 5 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFRDWGQ*WVSIKL
Trigger: GAGCTTTATAGACACCCACAATTGTCCCCAATCTCT...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCGACCAAGCTTCTCCTTaGGGTGTCTGCGGATCCTAT +
Preference number: 5 (lower is better)
Translates to: IPLCTLGRFECDQEGGDIDQASP*GVCGSY
Trigger: ATAGGATCCGCAGACACCCAAAGGAGAAGCTTGGTC...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTATCCGCCCAGGTGACATaGTGCGGGAGCCAAAACCTC +
Preference number: 5 (lower is better)
Translates to: DSTNANTVPLCQLHTACLSAQVT*CGSQNL
Trigger: GAGGTTTTGGCTCCCGCACAATGTCACCTGGGCGGA...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACTCCCAGTCCAGTTGCTaGGAGAGGCCTTCCAATCTC +
Preference number: 5 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYSQSSC*ERPSNL
Trigger: GAGATTGGAAGGCCTCTCCAAGCAACTGGACTGGGA...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATCCCAGTCCAGTTGCTaGGAGAGGCCTTCCAATCTC +
Preference number: 5 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRSQSSC*ERPSNL
Trigger: GAGATTGGAAGGCCTCTCCAAGCAACTGGACTGGGA...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTCTCCTGATTGCGTCTTaGTCGAAACCAGCGCTGAAT +
Preference number: 5 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSLLIAS*SKPALN
Trigger: ATTCAGCGCTGGTTTCGACAAAGACGCAATCAGGAG...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGAACCTCGTCAGCGTGCTaGGCTTCTCCTGATTGCGTC +
Preference number: 5 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRTSSAC*ASPDCV
Trigger: GACGCAATCAGGAGAAGCCAAGCACGCTGACGAGGT...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTGGACACCTTGCCTCTaGAAACAGCTTTGCAAGCTA +
Preference number: 5 (lower is better)
Translates to: GYALSGVSARLLAFLLLSWTPCL*KQLCKL
Trigger: TAGCTTGCAAAGCTGTTTCAAGAGGCAAGGTGTCCA...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305747.11
CDS-3UTR CAA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTGATGCTCATAGCACATaGGACTACAGCAAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLDAHST*DYSKRK
Trigger: CTTTCTCTTGCTGTAGTCCAATGTGCTATGAGCATC...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAGGAGGGAAGTTTCTATaGTACCTGGTGAGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQGGKFL*YLVSGF
Trigger: AAACCCACTCACCAGGTACAATAGAAACTTCCCTCC...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCTGGCTTCTTTACCTaGACTAGATGCCTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: GYALSGVSARLLAFLLLSSGFFT*TRCLWH
Trigger: ATGCCACAGGCATCTAGTCAAGGTAAAGAAGCCAGA...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAAGAGATTGGGGACAATaGTGGGTGTCTATAAAGCTC +
Preference number: 5 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVRDWGQ*WVSIKL
Trigger: GAGCTTTATAGACACCCACAATTGTCCCCAATCTCT...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAAACATCATGAAGAGATaGGGGACAATTGTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVNIMKR*GTIVGV
Trigger: GACACCCACAATTGTCCCCAATCTCTTCATGATGTT...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTACCTCTAAGTATTTATaGGAGGGGTTCCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLTSKYL*EGFQQP
Trigger: AGGCTGTTGGAACCCCTCCAATAAATACTTAGAGGT...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTATTGGGCGGAGCAATTaGTGGTCCATTGGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSIGRSN*WSIGLN
Trigger: ATTCAGGCCAATGGACCACAAATTGCTCCGCCCAAT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTACTCGGGCCATATTGTaGACATATGAAAAGGTAATC +
Preference number: 5 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFTRAIL*TYEKVI
Trigger: GATTACCTTTTCATATGTCAACAATATGGCCCGAGT...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCTCACTTCGATCATCCTaGGACACCTTGCCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: IPLCTLGRFECDQEGGDISLRSS*DTLPLE
Trigger: TTCAAGAGGCAAGGTGTCCAAGGATGATCGAAGTGA...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305747.11
CDS-3UTR CAA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGATGGTCCCATTGGTGGTaGTCGCAGTGTGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRWSHWW*SQCGDS
Trigger: AGAATCCCCACACTGCGACAACCACCAATGGGACCA...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAGTACCACTGGTCCCATaGGTGGTTGTCGCAGTGTGG +
Preference number: 5 (lower is better)
Translates to: DSTNANTVPLCQLHTACLVPLVP*VVVAVW
Trigger: CCACACTGCGACAACCACCAATGGGACCAGTGGTAC...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTGATGCTCATAGCACATaGGACTACAGCAAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: GYALSGVSARLLAFLLLSDAHST*DYSKRK
Trigger: CTTTCTCTTGCTGTAGTCCAATGTGCTATGAGCATC...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAACTAGCTCACACCCATaGAAGAAATCTTGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQTSSHP*KKSWLC
Trigger: ACACAGCCAAGATTTCTTCAATGGGTGTGAGCTAGT...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TGCTCCCTGGTTTCCAGGCCACGCAACAGACATCAAACCAGGAAGCCAAACTTTATAGTCTTTCTCCCATaGGCTTTATTTTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: CSLVSRPRNRHQTRKPNFIVFLP*ALFCSA
Trigger: TGCTGAGCAAAATAAAGCCAATGGGAGAAAGACTAT...AAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCCTGGAAACCAGGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTGGAGGGAAGTTTCTATaGTACCTGGTGAGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSGGKFL*YLVSGF
Trigger: AAACCCACTCACCAGGTACAATAGAAACTTCCCTCC...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTTTTTCCAGAATGGCATaGGGCGGAGCAATTTGTGGT +
Preference number: 5 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSFSRMA*GGAICG
Trigger: ACCACAAATTGCTCCGCCCAATGCCATTCTGGAAAA...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGACTCCTGATTGCGTCTTaGTCGAAACCAGCGCTGAAT +
Preference number: 5 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRLLIAS*SKPALN
Trigger: ATTCAGCGCTGGTTTCGACAAAGACGCAATCAGGAG...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACAGTACCACTGGTCCCATaGGTGGTTGTCGCAGTGTGG +
Preference number: 5 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTVPLVP*VVVAVW
Trigger: CCACACTGCGACAACCACCAATGGGACCAGTGGTAC...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTACTAGCTCACACCCATaGAAGAAATCTTGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSTSSHP*KKSWLC
Trigger: ACACAGCCAAGATTTCTTCAATGGGTGTGAGCTAGT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CCCCATGGGGTCTCAGCATGTGGTCATGTGGTAATGCATTCCTTTCAAAGGCTTCTATTAACCCACAGATaGCAAATTGTGGGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: PHGVSACGHVVMHSFQRLLLTHR*QIVGKK
Trigger: CTTTTTGCCCACAATTTGCAATCTGTGGGTTAATAG...AAGCCTTTGAAAGGAATGCATTACCACATGACCACATGCTGAGACCCCATGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGAGTACTCTGGGAAGGTTaGAATGTGACCAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRVLWEG*NVTRKE
Trigger: CTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTAC...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTTCTGGCTTCTTTACCTaGACTAGATGCCTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSSGFFT*TRCLWH
Trigger: ATGCCACAGGCATCTAGTCAAGGTAAAGAAGCCAGA...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACAACATCATGAAGAGATaGGGGACAATTGTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: CFCTLVSISAVVFTALIHNIMKR*GTIVGV
Trigger: GACACCCACAATTGTCCCCAATCTCTTCATGATGTT...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAATCACTACGGGGTACTTaGACAATGGCACAATTTCAT +
Preference number: 5 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQSLRGT*TMAQFH
Trigger: ATGAAATTGTGCCATTGTCAAAGTACCCCGTAGTGA...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGAGACCAAGCTTCTCCTTaGGGTGTCTGCGGATCCTAT +
Preference number: 5 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRDQASP*GVCGSY
Trigger: ATAGGATCCGCAGACACCCAAAGGAGAAGCTTGGTC...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCCCAGAATGCCTAGTTTaGTGGAGACACCATGTACTA +
Preference number: 5 (lower is better)
Translates to: IPLCTLGRFECDQEGGDIPECLV*WRHHVL
Trigger: TAGTACATGGTGTCTCCACAAAACTAGGCATTCTGG...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTGGGCTTTATGAAACTTaGGGAAATCAAACTCAGAGG +
Preference number: 5 (lower is better)
Translates to: GYALSGVSARLLAFLLLSGLYET*GNQTQR
Trigger: CCTCTGAGTTTGATTTCCCAAAGTTTCATAAAGCCC...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGTTCCACTTCCCAGCCTaGCCTCTTGAAACAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQFHFPA*PLETAL
Trigger: CAAAGCTGTTTCAAGAGGCAAGGCTGGGAAGTGGAA...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392687.4
CDS-3UTR CAA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGTTTTCCAGAATGGCATaGGGCGGAGCAATTTGTGGT +
Preference number: 5 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQFSRMA*GGAICG
Trigger: ACCACAAATTGCTCCGCCCAATGCCATTCTGGAAAA...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAACTCGGGCCATATTGTaGACATATGAAAAGGTAATC +
Preference number: 5 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQTRAIL*TYEKVI
Trigger: GATTACCTTTTCATATGTCAACAATATGGCCCGAGT...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTCCCATTGAAGAAATCTaGGCTGTGTGCACAAGAAAT +
Preference number: 5 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSPIEEI*AVCTRN
Trigger: ATTTCTTGTGCACACAGCCAAGATTTCTTCAATGGG...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTTCACAGCCCTGATTCACCCCATTGAAGAAATCTaGGCTGTGTGCACAAGAAAT +
Preference number: 5 (lower is better)
Translates to: CFCTLVSISAVVFTALIHPIEEI*AVCTRN
Trigger: ATTTCTTGTGCACACAGCCAAGATTTCTTCAATGGG...GTGAATCAGGGCTGTGAAGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTCCCACAGATTGCAAATaGTGGGCAAAAAGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: GYALSGVSARLLAFLLLSPTDCK*WAKSFN
Trigger: ATTAAAGCTTTTTGCCCACAATTTGCAATCTGTGGG...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGGCGGCTTGTGACAACTGAACTGCTGATTATTCCTTCCATGGACAGCATGGTAATGAAGGCATTTAGTTaGCTCAAATTCAAACTCCAC +
Preference number: 5 (lower is better)
Translates to: GRLVTTELLIIPSMDSMVMKAFS*LKFKLH
Trigger: GTGGAGTTTGAATTTGAGCAAACTAAATGCCTTCAT...TACCATGCTGTCCATGGAAGGAATAATCAGCAGTTCAGTTGTCACAAGCCGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTTCACTACGGGGTACTTaGACAATGGCACAATTTCAT +
Preference number: 5 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSSLRGT*TMAQFH
Trigger: ATGAAATTGTGCCATTGTCAAAGTACCCCGTAGTGA...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTAACCACAGAGCCCTTTaGTGGCCTATTATTATGAAG +
Preference number: 5 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSNHRAL*WPIIMK
Trigger: CTTCATAATAATAGGCCACAAAAGGGCTCTGTGGTT...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCAACCACAGAGCCCTTTaGTGGCCTATTATTATGAAG +
Preference number: 5 (lower is better)
Translates to: IPLCTLGRFECDQEGGDINHRAL*WPIIMK
Trigger: CTTCATAATAATAGGCCACAAAAGGGCTCTGTGGTT...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACAGCTATGGCGCACGGTTaGGCTACAAATCTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTAMAHG*ATNLSK
Trigger: CTTCGAGAGATTTGTAGCCAAACCGTGCGCCATAGC...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTAATTGGGCGGAGCAATTaGTGGTCCATTGGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: DSTNANTVPLCQLHTACLIGRSN*WSIGLN
Trigger: ATTCAGGCCAATGGACCACAAATTGCTCCGCCCAAT...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGATCATCCTTGGACACCTaGCCTCTTGAAACAGCTTTG +
Preference number: 5 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRSSLDT*PLETAL
Trigger: CAAAGCTGTTTCAAGAGGCAAGGTGTCCAAGGATGA...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305747.11
CDS-3UTR CAA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGTGGTCCCATTGGTGGTaGTCGCAGTGTGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLWSHWW*SQCGDS
Trigger: AGAATCCCCACACTGCGACAACCACCAATGGGACCA...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGAGGTGTTTCTGCACGCTaGTTAGCATTTCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRGVSAR*LAFLLL
Trigger: CAACAGCAGAAATGCTAACAAGCGTGCAGAAACACC...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp ATACCCCTTTGTACTCTGGGAAGGTTTGAATGTGACCAGGAAGGAGGAGATATCGGTTCACCAACCATTTaGATCAAAGGTGATCTGATT +
Preference number: 5 (lower is better)
Translates to: IPLCTLGRFECDQEGGDIGSPTI*IKGDLI
Trigger: AATCAGATCACCTTTGATCAAAATGGTTGGTGAACC...GATATCTCCTCCTTCCTGGTCACATTCAAACCTTCCCAGAGTACAAAGGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GGATACGCACTCTCTGGTGTTTCTGCACGCTTGTTAGCATTTCTGCTGTTGTCTATGAAGGCATTTAGTTaGCTCAAATTCAAACTCCAC +
Preference number: 5 (lower is better)
Translates to: GYALSGVSARLLAFLLLSMKAFS*LKFKLH
Trigger: GTGGAGTTTGAATTTGAGCAAACTAAATGCCTTCAT...AGACAACAGCAGAAATGCTAACAAGCGTGCAGAAACACCAGAGAGTGCGTATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CATGAGATAAGCAAGACAGATCTTAACGGTCCCCTCACATCCCTTTCTGGGCAAAATGTTCAGGCAACTTaGGCATTAACATTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: HEISKTDLNGPLTSLSGQNVQAT*ALTFPR
Trigger: TCTTGGAAATGTTAATGCCAAAGTTGCCTGAACATT...TTGCCCAGAAAGGGATGTGAGGGGACCGTTAAGATCTGTCTTGCTTATCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TCTTATGACCTGTGCTTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGAACCTCTAAGTATTTATaGGAGGGGTTCCAACAGCCT +
Preference number: 5 (lower is better)
Translates to: SYDLCLAIFSSLAKRLKRTSKYL*EGFQQP
Trigger: AGGCTGTTGGAACCCCTCCAATAAATACTTAGAGGT...TCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAAGCACAGGTCATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp CAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCTTTCAAAGGCTTTGGGTaGAACTCAAGTTGGAAATAC +
Preference number: 5 (lower is better)
Translates to: QSYGLVQGEDEILHIFFSFKGFG*NSSWKY
Trigger: GTATTTCCAACTTGAGTTCAACCCAAAGCCTTTGAA...AGAGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCCAGAATGCCTAGTTTaGTGGAGACACCATGTACTA +
Preference number: 5 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYPECLV*WRHHVL
Trigger: TAGTACATGGTGTCTCCACAAAACTAGGCATTCTGG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACTCACTTCGATCATCCTaGGACACATGTAAAGGGTTC +
Preference number: 5 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYSLRSS*DTCKGF
Trigger: GAACCCTTTACATGTGTCCAAGGATGATCGAAGTGA...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392687.4
CDS-3UTR CAA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGAACATCCCAGTCCAGTaGCTTGGAGAGGCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLNIPVQ*LGEAFQ
Trigger: TTGGAAGGCCTCTCCAAGCAACTGGACTGGGATGTT...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTCCTCTTGAAACAGCTTaGCAAGCTATTTTCACAATC +
Preference number: 5 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSPLETA*QAIFTI
Trigger: GATTGTGAAAATAGCTTGCAAAGCTGTTTCAAGAGG...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGTGGGTTGAACTCAAGTaGGAAATACCTGGAAAAGAC +
Preference number: 5 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQWVELK*EIPGKD
Trigger: GTCTTTTCCAGGTATTTCCAACTTGAGTTCAACCCA...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGGGGCTTTATGAAACTTaGGGAAATCAAACTCAGAGG +
Preference number: 5 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQGLYET*GNQTQR
Trigger: CCTCTGAGTTTGATTTCCCAAAGTTTCATAAAGCCC...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp GACAGTACAAATGCAAATACTGTTCCCTTGTGTCAATTACATACAGCATGCCTACTCTTGCACTGGGTTTaGCTTGCTCTAAGTGACAAA +
Preference number: 5 (lower is better)
Translates to: DSTNANTVPLCQLHTACLLLHWV*LALSDK
Trigger: TTTGTCACTTAGAGCAAGCAAAACCCAGTGCAAGAG...TAGGCATGCTGTATGTAATTGACACAAGGGAACAGTATTTGCATTTGTACTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGATAGTCTTTCTCCCATaGGCTTTATTTTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQIVFLP*ALFCSA
Trigger: TGCTGAGCAAAATAAAGCCAATGGGAGAAAGACTAT...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp AGTGGCAAGTGCAGTAACTGGGCTCATTGCATTTTCTCTTTCCATACAAGTTACCTATTAACCCACAGATaGCAAATTGTGGGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: SGKCSNWAHCIFSFHTSYLLTHR*QIVGKK
Trigger: CTTTTTGCCCACAATTTGCAATCTGTGGGTTAATAG...GTAACTTGTATGGAAAGAGAAAATGCAATGAGCCCAGTTACTGCACTTGCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TTCAAAGCTATGGCCTGGTACAGGGGGAGGATGAGATACTGCACATATTTTTCTAATGTTCAGGCAACTTaGGCATTAACATTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: FKAMAWYRGRMRYCTYFSNVQAT*ALTFPR
Trigger: TCTTGGAAATGTTAATGCCAAAGTTGCCTGAACATT...AGAAAAATATGTGCAGTATCTCATCCTCCCCCTGTACCAGGCCATAGCTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TTAGCCATATTTAGCTCACTGGCTAAGAGGCTGAAAAGATTCTACCACCTTCAGTTCAAAGGCTTTGGGTaGAACTCAAGTTGGAAATAC +
Preference number: 5 (lower is better)
Translates to: LAIFSSLAKRLKRFYHLQFKGFG*NSSWKY
Trigger: GTATTTCCAACTTGAGTTCAACCCAAAGCCTTTGAA...CTGAAGGTGGTAGAATCTTTTCAGCCTCTTAGCCAGTGAGCTAAATATGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp ATATTTTTCTCTCTCAGCCTTATCAGGCTACCATGGGAAAGCTATAGACAGAGAGCAAATACTGTTCCCTaGTGTCAATTACATACAGCA +
Preference number: 5 (lower is better)
Translates to: IFFSLSLIRLPWESYRQRANTVP*CQLHTA
Trigger: TGCTGTATGTAATTGACACAAGGGAACAGTATTTGC...TCTCTGTCTATAGCTTTCCCATGGTAGCCTGATAAGGCTGAGAGAGAAAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGCTCTTGCACTGGGTTTaGCTTGCTCTAAGTGACAAA +
Preference number: 5 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLLLHWV*LALSDK
Trigger: TTTGTCACTTAGAGCAAGCAAAACCCAGTGCAAGAG...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACACCTCTTGAAACAGCTTaGCAAGCTATTTTCACAATC +
Preference number: 5 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTPLETA*QAIFTI
Trigger: GATTGTGAAAATAGCTTGCAAAGCTGTTTCAAGAGG...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACACCCACAGATTGCAAATaGTGGGCAAAAAGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTPTDCK*WAKSFN
Trigger: ATTAAAGCTTTTTGCCCACAATTTGCAATCTGTGGG...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TACCATGGGAAAGCTATAGACAGAGATATATTATTCTTCACCATAAAAAGCCTGTGGGTTGAACTCAAGTaGGAAATACCTGGAAAAGAC +
Preference number: 5 (lower is better)
Translates to: YHGKAIDRDILFFTIKSLWVELK*EIPGKD
Trigger: GTCTTTTCCAGGTATTTCCAACTTGAGTTCAACCCA...CAGGCTTTTTATGGTGAAGAATAATATATCTCTGTCTATAGCTTTCCCATGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS-3UTR CAA 90 bp TCCTTGAAATTATTCTTCTGTGCTCGAGTGTCATATGATCTAAACCTGAACACATTATGGCATTTTTGTTaGGGGTTCGTTCTAAGTGAT +
Preference number: 5 (lower is better)
Translates to: SLKLFFCARVSYDLNLNTLWHFC*GFVLSD
Trigger: ATCACTTAGAACGAACCCCAAACAAAAATGCCATAA...TGTGTTCAGGTTTAGATCATATGACACTCGAGCACAGAAGAATAATTTCAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 90 bp AGCCAAAACCTCTCGTTCCAGAACCAGGCTAAGATCCCTGCCATCTaGCTTTGTCCACTCCTGTCCTGCGGCACCCGCAGCCCGCCAAGC +
Preference number: 6 (lower is better)
Translates to: SQNLSFQNQAKIPAI*LCPLLSCGTRSPPS
Trigger: GCTTGGCGGGCTGCGGGTGCCGCAGGACAGGAGTGGACAAAGCAAGATGGCAGGGATCTTAGCCTGGTTCTGGAACGAGAGGTTTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS TCA 72 bp AGGTGGCCTCCTCCGTGTTCTTCAGGTCCGCCCAGGTaGCATTGTGCGGGAGCCAAAACCTCTCGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: RWPPPCSSGPPR*HCAGAKTSRSR
Trigger: TCTGGAACGAGAGGTTTTGGCTCCCGCACAATGTCACCTGGGCGGACCTGAAGAACACGGAGGAGGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 72 bp GCCTCCTCCGTGTTCTTCAGGTCCGCCCAGGTGACATaGTGCGGGAGCCAAAACCTCTCGTTCCAGAACCAG +
Preference number: 6 (lower is better)
Translates to: ASSVFFRSAQVT*CGSQNLSFQNQ
Trigger: CTGGTTCTGGAACGAGAGGTTTTGGCTCCCGCACAATGTCACCTGGGCGGACCTGAAGAACACGGAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 90 bp GGGAAGGTGGCCTCCTCCGTGTTCTTCAGGTCCGCCCAGGTGACATaGTGCGGGAGCCAAAACCTCTCGTTCCAGAACCAGGCTAAGATC +
Preference number: 6 (lower is better)
Translates to: GKVASSVFFRSAQVT*CGSQNLSFQNQAKI
Trigger: GATCTTAGCCTGGTTCTGGAACGAGAGGTTTTGGCTCCCGCACAATGTCACCTGGGCGGACCTGAAGAACACGGAGGAGGCCACCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 90 bp GAGCAGGAGCCAGTCAGGAGATACCCGTTGGTACCACTGGTCCCATaGGTGGTTGTCGCAGTGTGGGGATTCTTTCCCGGAGGTTCTGAG +
Preference number: 6 (lower is better)
Translates to: EQEPVRRYPLVPLVP*VVVAVWGFFPGGSE
Trigger: CTCAGAACCTCCGGGAAAGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCCTGACTGGCTCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 90 bp AGCCAGTCAGGAGATACCCGTTGGTACCACTGGTCCCATTGGTGGTaGTCGCAGTGTGGGGATTCTTTCCCGGAGGTTCTGAGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SQSGDTRWYHWSHWW*SQCGDSFPEVLSPP
Trigger: AGGAGGACTCAGAACCTCCGGGAAAGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCCTGACTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 72 bp CAGTCAGGAGATACCCGTTGGTACCACTGGTCCCATTaGTGGTTGTCGCAGTGTGGGGATTCTTTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: QSGDTRWYHWSH*WLSQCGDSFPE
Trigger: CTCCGGGAAAGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCCTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 72 bp AGCAGGAGCCAGTCAGGAGATACCCGTTGGTACCACTaGTCCCATTGGTGGTTGTCGCAGTGTGGGGATTCT +
Preference number: 6 (lower is better)
Translates to: SRSQSGDTRWYH*SHWWLSQCGDS
Trigger: AGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCCTGACTGGCTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 72 bp CATCCATGGAGCAGGAGCCAGTCAGGAGATACCCGTTaGTACCACTGGTCCCATTGGTGGTTGTCGCAGTGT +
Preference number: 6 (lower is better)
Translates to: HPWSRSQSGDTR*YHWSHWWLSQC
Trigger: ACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCCTGACTGGCTCCTGCTCCATGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 72 bp GGAGATACCCGTTGGTACCACTGGTCCCATTGGTGGTaGTCGCAGTGTGGGGATTCTTTCCCGGAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: GDTRWYHWSHWW*SQCGDSFPEVL
Trigger: CAGAACCTCCGGGAAAGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 72 bp CCAGTCAGGAGATACCCGTTGGTACCACTGGTCCCATaGGTGGTTGTCGCAGTGTGGGGATTCTTTCCCGGA +
Preference number: 6 (lower is better)
Translates to: PVRRYPLVPLVP*VVVAVWGFFPG
Trigger: TCCGGGAAAGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCCTGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 72 bp TTGGTACCACTGGTCCCATTGGTGGTTGTCGCAGTGTaGGGATTCTTTCCCGGAGGTTCTGAGTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: LVPLVPLVVVAV*GFFPGGSESSS
Trigger: TGAGGAGGACTCAGAACCTCCGGGAAAGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 72 bp TCAGGAGATACCCGTTGGTACCACTGGTCCCATTGGTaGTTGTCGCAGTGTGGGGATTCTTTCCCGGAGGTT +
Preference number: 6 (lower is better)
Translates to: SGDTRWYHWSHW*LSQCGDSFPEV
Trigger: AACCTCCGGGAAAGAATCCCCACACTGCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS TCA 72 bp ATGGCATTGGGCGGAGCAATTTGTGGTCCATTGGCCTaGATGTTGAGGGCTATGGCGCACGGTTTGGCTACA +
Preference number: 6 (lower is better)
Translates to: MALGGAICGPLA*MLRAMAHGLAT
Trigger: TGTAGCCAAACCGTGCGCCATAGCCCTCAACATTCAGGCCAATGGACCACAAATTGCTCCGCCCAATGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 72 bp TCTCCACATGCTCTCACAGAACCTCGTCAGCGTGCTTaGCTTCTCCTGATTGCGTCTTTGTCGAAACCAGCG +
Preference number: 6 (lower is better)
Translates to: SPHALTEPRQRA*LLLIASLSKPA
Trigger: CGCTGGTTTCGACAAAGACGCAATCAGGAGAAGCCAAGCACGCTGACGAGGTTCTGTGAGAGCATGTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 72 bp CCTCGTCAGCGTGCTTGGCTTCTCCTGATTGCGTCTTaGTCGAAACCAGCGCTGAATGCTTCGAACATCCCA +
Preference number: 6 (lower is better)
Translates to: PRQRAWLLLIAS*SKPALNASNIP
Trigger: TGGGATGTTCGAAGCATTCAGCGCTGGTTTCGACAAAGACGCAATCAGGAGAAGCCAAGCACGCTGACGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 90 bp CTCACAGAACCTCGTCAGCGTGCTTGGCTTCTCCTGATTGCGTCTTaGTCGAAACCAGCGCTGAATGCTTCGAACATCCCAGTCCAGTTG +
Preference number: 6 (lower is better)
Translates to: LTEPRQRAWLLLIAS*SKPALNASNIPVQL
Trigger: CAACTGGACTGGGATGTTCGAAGCATTCAGCGCTGGTTTCGACAAAGACGCAATCAGGAGAAGCCAAGCACGCTGACGAGGTTCTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS TCA 72 bp TGGGCGGAGCAATTTGTGGTCCATTGGCCTGAATGTTaGGGGCTATGGCGCACGGTTTGGCTACAAATCTCT +
Preference number: 6 (lower is better)
Translates to: WAEQFVVHWPEC*GLWRTVWLQIS
Trigger: AGAGATTTGTAGCCAAACCGTGCGCCATAGCCCTCAACATTCAGGCCAATGGACCACAAATTGCTCCGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS GCA 72 bp TCTCCTGATTGCGTCTTTGTCGAAACCAGCGCTGAATaGTTCGAACATCCCAGTCCAGTTGCTTGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: SPDCVFVETSAE*FEHPSPVAWRG
Trigger: GCCTCTCCAAGCAACTGGACTGGGATGTTCGAAGCATTCAGCGCTGGTTTCGACAAAGACGCAATCAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CCA 72 bp GACCTTTTCCAGAATGGCATTGGGCGGAGCAATTTGTaGTCCATTGGCCTGAATGTTGAGGGCTATGGCGCA +
Preference number: 6 (lower is better)
Translates to: DLFQNGIGRSNL*SIGLNVEGYGA
Trigger: TGCGCCATAGCCCTCAACATTCAGGCCAATGGACCACAAATTGCTCCGCCCAATGCCATTCTGGAAAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 72 bp GAAGACCTTTTCCAGAATGGCATTGGGCGGAGCAATTaGTGGTCCATTGGCCTGAATGTTGAGGGCTATGGC +
Preference number: 6 (lower is better)
Translates to: EDLFQNGIGRSN*WSIGLNVEGYG
Trigger: GCCATAGCCCTCAACATTCAGGCCAATGGACCACAAATTGCTCCGCCCAATGCCATTCTGGAAAAGGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 90 bp AATTGCAGTGAAGACCTTTTCCAGAATGGCATTGGGCGGAGCAATTaGTGGTCCATTGGCCTGAATGTTGAGGGCTATGGCGCACGGTTT +
Preference number: 6 (lower is better)
Translates to: NCSEDLFQNGIGRSN*WSIGLNVEGYGARF
Trigger: AAACCGTGCGCCATAGCCCTCAACATTCAGGCCAATGGACCACAAATTGCTCCGCCCAATGCCATTCTGGAAAAGGTCTTCACTGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS GCA 72 bp AAAATCTCCACATGCTCTCACAGAACCTCGTCAGCGTaGTTGGCTTCTCCTGATTGCGTCTTTGTCGAAACC +
Preference number: 6 (lower is better)
Translates to: KISTCSHRTSSA*LASPDCVFVET
Trigger: GGTTTCGACAAAGACGCAATCAGGAGAAGCCAAGCACGCTGACGAGGTTCTGTGAGAGCATGTGGAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 72 bp AAACCAGCGCTGAATGCTTCGAACATCCCAGTCCAGTaGCTTGGAGAGGCCTTCCAATCTCTTTTCATCAGG +
Preference number: 6 (lower is better)
Translates to: KPALNASNIPVQ*LGEAFQSLFIR
Trigger: CCTGATGAAAAGAGATTGGAAGGCCTCTCCAAGCAACTGGACTGGGATGTTCGAAGCATTCAGCGCTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 90 bp AAAATGAAAATCTCCACATGCTCTCACAGAACCTCGTCAGCGTGCTaGGCTTCTCCTGATTGCGTCTTTGTCGAAACCAGCGCTGAATGC +
Preference number: 6 (lower is better)
Translates to: KMKISTCSHRTSSAC*ASPDCVFVETSAEC
Trigger: GCATTCAGCGCTGGTTTCGACAAAGACGCAATCAGGAGAAGCCAAGCACGCTGACGAGGTTCTGTGAGAGCATGTGGAGATTTTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4
CDS CAA 90 bp TCTTTGTCGAAACCAGCGCTGAATGCTTCGAACATCCCAGTCCAGTaGCTTGGAGAGGCCTTCCAATCTCTTTTCATCAGGATGCTTTGT +
Preference number: 6 (lower is better)
Translates to: SLSKPALNASNIPVQ*LGEAFQSLFIRMLC
Trigger: ACAAAGCATCCTGATGAAAAGAGATTGGAAGGCCTCTCCAAGCAACTGGACTGGGATGTTCGAAGCATTCAGCGCTGGTTTCGACAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305747.11
ENST00000392687.4