RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CERS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000154227

Ensembl transcript IDs: ENST00000284382.8, ENST00000394113.5, ENST00000538112.6, ENST00000558884.6, ENST00000559023.5, ENST00000559639.1, ENST00000560944.1, ENST00000679737.1

Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTaGTCCCTTCCGGAGGGTGAGGACAAGCTGGCTACTGATCTGCCC +
Preference number: 1 (lower is better)
Translates to: DKAAREAGTCASLLR*SLPEGEDKLATDLP
Trigger: GGGCAGATCAGTAGCCAGCTTGTCCTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR CCA 90 bp GTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGGACAAGCTaGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGG +
Preference number: 1 (lower is better)
Translates to: VQVFSGAPFRRVRTS*LLICPSLSLLPGSW
Trigger: CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR TCA 90 bp CCAGGTCAGCCCTGCACATTGTGCCCAGGAGATGTGTCCCTCTGGTaGCAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCG +
Preference number: 1 (lower is better)
Translates to: PGQPCTLCPGDVSLW*QGRKGGRDVCKSSP
Trigger: CGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTCCTGGGCACAATGTGCAGGGCTGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR CCA 90 bp AAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTaGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGT +
Preference number: 1 (lower is better)
Translates to: KAVVRKREGQNVGSV*GLEARLPTVLAACC
Trigger: ACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
3UTR CCA 90 bp AGGAAATCACGTAGCATCCTCTGTTCCCAAGATCTCCCCTGGGTCTaGCAGTGTACATGCGTGCCCTCCCCAGAGGCTCAGGCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: RKSRSILCSQDLPWV*QCTCVPSPEAQASW
Trigger: CCAGGAGGCCTGAGCCTCTGGGGAGGGCACGCATGTACACTGCCAGACCCAGGGGAGATCTTGGGAACAGAGGATGCTACGTGATTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR CCA 90 bp AGCCAGAGGAAATCACGTAGCATCCTCTGTTCCCAAGATCTCCCCTaGGTCTGGCAGTGTACATGCGTGCCCTCCCCAGAGGCTCAGGCC +
Preference number: 1 (lower is better)
Translates to: SQRKSRSILCSQDLP*VWQCTCVPSPEAQA
Trigger: GGCCTGAGCCTCTGGGGAGGGCACGCATGTACACTGCCAGACCCAGGGGAGATCTTGGGAACAGAGGATGCTACGTGATTTCCTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR TCA 90 bp CAGGCAAGGTGGCGAGGCGAAAGGGTCTATAACAAAGCGAGCCCCTaGGAAAGTGACATGCATGAGGGAGTGCAATTAGAACTGAGACGG +
Preference number: 1 (lower is better)
Translates to: QARWRGERVYNKASP*ESDMHEGVQLELRR
Trigger: CCGTCTCAGTTCTAATTGCACTCCCTCATGCATGTCACTTTCTCAGGGGCTCGCTTTGTTATAGACCCTTTCGCCTCGCCACCTTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR TCA 90 bp CAGGAAGGAACAGGGCCTAAGCTTCCTTCCTTGAACCATGGGTCCTaGGGGAGAAGAATTCCAGGAGAATCTGAGAATGACCCTTGGGGA +
Preference number: 1 (lower is better)
Translates to: QEGTGPKLPSLNHGS*GRRIPGESENDPWG
Trigger: TCCCCAAGGGTCATTCTCAGATTCTCCTGGAATTCTTCTCCCTCAGGACCCATGGTTCAAGGAAGGAAGCTTAGGCCCTGTTCCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR GCA 90 bp CCCATTGCAGTGCCATGTTTAGCCAGGTTTCTGTCTCCCAAACAGTaGAAAGTGGGTTGGTTCACGATGACCCCACGGTTGACAGTGTGT +
Preference number: 1 (lower is better)
Translates to: PIAVPCLARFLSPKQ*KVGWFTMTPRLTVC
Trigger: ACACACTGTCAACCGTGGGGTCATCGTGAACCAACCCACTTTGCACTGTTTGGGAGACAGAAACCTGGCTAAACATGGCACTGCAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR TCA 90 bp AGACCAGCAAAGGACAGGAAGGAACAGGGCCTAAGCTTCCTTCCTTaGACCATGGGTCCTGAGGGAGAAGAATTCCAGGAGAATCTGAGA +
Preference number: 1 (lower is better)
Translates to: RPAKDRKEQGLSFLP*TMGPEGEEFQENLR
Trigger: TCTCAGATTCTCCTGGAATTCTTCTCCCTCAGGACCCATGGTTCAAGGAAGGAAGCTTAGGCCCTGTTCCTTCCTGTCCTTTGCTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR TCA 90 bp GTGTGGTCCTTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTTaGGAAAGAAGCTGCTCTTTGTGGCCAAACACACCTGGGAAAAAT +
Preference number: 1 (lower is better)
Translates to: VWSFRSCPTATSNSF*ERSCSLWPNTPGKN
Trigger: ATTTTTCCCAGGTGTGTTTGGCCACAAAGAGCAGCTTCTTTCTCAAAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAAGGACCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR TCA 90 bp ATGAACATACAAAATCTGACCGTTATGAGAGACTGTGCCAGGTGGTaGGGACAGATGCAGATTTTACTCAGGGTCTTCCTTGGGAAGGCC +
Preference number: 1 (lower is better)
Translates to: MNIQNLTVMRDCARW*GQMQILLRVFLGKA
Trigger: GGCCTTCCCAAGGAAGACCCTGAGTAAAATCTGCATCTGTCCTCACCACCTGGCACAGTCTCTCATAACGGTCAGATTTTGTATGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR TCA 90 bp GTCCCTACAAGCCGACCTCTCCTGTGGCTTTCTAGTACGAGCCCCTaGATAAATAGGATGAACATACAAAATCTGACCGTTATGAGAGAC +
Preference number: 1 (lower is better)
Translates to: VPTSRPLLWLSSTSP*INRMNIQNLTVMRD
Trigger: GTCTCTCATAACGGTCAGATTTTGTATGTTCATCCTATTTATTCAGGGGCTCGTACTAGAAAGCCACAGGAGAGGTCGGCTTGTAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGGGTCGGTGTGGGGCCTaGAAGCCAGGCTGCCAACAG +
Preference number: 2 (lower is better)
Translates to: REAGTCASLLRCSLPEGEGRCGA*KPGCQQ
Trigger: CTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGACC...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR GCA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGGGTCCCCAGGTACTGTaGTGGCCTGAAGGAAGGGCT +
Preference number: 2 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRGPQVL*WPEGRA
Trigger: AGCCCTTCCTTCAGGCCAGCACAGTACCTGGGGACC...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR GCA 90 bp AGGACAAGCTGGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGGGGCAGTGTACATGCGTaGCCTCCCCAGAGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: RTSWLLICPSLSLLPGSWGSVHA*PPQRLR
Trigger: CCTGAGCCTCTGGGGAGGGCACGCATGTACACTGCC...CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR GCA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTGTGGCAGGCAGGGACTaGCACCGCCCTGTGGAGATG +
Preference number: 2 (lower is better)
Translates to: MCPSGDKAAREAGTCASLVAGRD*HRPVEM
Trigger: CATCTCCACAGGGCGGTGGCAGTCCCTGCCTGCCAC...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR GCA 90 bp AGGACAAGCTGGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGGGTCTGGCAGTGTACATaGGTGCCCTCCCCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: RTSWLLICPSLSLLPGSWVWQCT*VPSPEA
Trigger: AGCCTCTGGGGAGGGCACGCATGTACACTGCCAGAC...CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CCA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTAATGTGGGGTCGGTGTaGGGCCTGGAAGCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: EMCPSGDKAAREAGTCASNVGSV*GLEARL
Trigger: CAGCCTGGCTTCCAGGCCCCACACCGACCCCACATT...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CCA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGTCCCAAGATCTCCCCTaGGTCTGGCAGTGTACATGC +
Preference number: 2 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRSQDLP*VWQCTC
Trigger: GCATGTACACTGCCAGACCCAGGGGAGATCTTGGGA...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR TCA 90 bp AGGCAGGGACTGCCACCGCCCTGTGGAGATGAGGCACCTAAGCTTCAGGATGGACCTGTGAAAGCGTCCTaGGGACAGGCAAGGTGGCGA +
Preference number: 2 (lower is better)
Translates to: RQGLPPPCGDEAPKLQDGPVKAS*GQARWR
Trigger: TCGCCACCTTGCCTGTCCTCAGGACGCTTTCACAGG...TCCATCCTGAAGCTTAGGTGCCTCATCTCCACAGGGCGGTGGCAGTCCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGCAGCATGCTGTGCCATaGGAGTCCTGTAGGCTTCCA +
Preference number: 2 (lower is better)
Translates to: REAGTCASLLRCSLPEGEQHAVP*ESCRLP
Trigger: TGGAAGCCTACAGGACTCCCATGGCACAGCATGCTG...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CCA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTAATGTGGGGTCGGTGTaGGGCCTGGAAGCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: MCPSGDKAAREAGTCASLNVGSV*GLEARL
Trigger: CAGCCTGGCTTCCAGGCCCCACACCGACCCCACATT...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR GCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCACTTGCAGCATGCTGTaGCATGGGAGTCCTGTAGGC +
Preference number: 2 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSTCSML*HGSPVG
Trigger: GCCTACAGGACTCCCATGGCACAGCATGCTGCAAGT...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
3UTR-3UTR GCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTACTTGCAGCATGCTGTaGCATGGGAGTCCTGTAGGC +
Preference number: 2 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPTCSML*HGSPVG
Trigger: GCCTACAGGACTCCCATGGCACAGCATGCTGCAAGT...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
3UTR-3UTR GCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCGCTGCCAACAGTACTTaGAGCATGCTGTGCCATGGG +
Preference number: 2 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSAANST*SMLCHG
Trigger: CCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGC...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
3UTR-3UTR GCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCTGCCAACAGTACTTaGAGCATGCTGTGCCATGGG +
Preference number: 2 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEAANST*SMLCHG
Trigger: CCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGC...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
3UTR-3UTR CCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCCAGCATGCTGTGCCATaGGAGTCCTGTAGGCTTCCA +
Preference number: 2 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSQHAVP*ESCRLP
Trigger: TGGAAGCCTACAGGACTCCCATGGCACAGCATGCTG...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
3UTR-3UTR GCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAACAGTACTTGCAGCATaGTGTGCCATGGGAGTCCTG +
Preference number: 2 (lower is better)
Translates to: AVVRKREGQNVGSVWGLETVLAA*CAMGVL
Trigger: CAGGACTCCCATGGCACAGCATGCTGCAAGTACTGT...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
3UTR-3UTR GCA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTGCCTGGAAGCCAGGCTaGCAACAGTACTTGCAGCAT +
Preference number: 2 (lower is better)
Translates to: MCPSGDKAAREAGTCASLAWKPG*QQYLQH
Trigger: ATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR GCA 90 bp AGGACAAGCTGGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGGCTGTCTCCCAAACAGTaGAAAGTGGGTTGGTTCACG +
Preference number: 2 (lower is better)
Translates to: RTSWLLICPSLSLLPGSWLSPKQ*KVGWFT
Trigger: CGTGAACCAACCCACTTTGCACTGTTTGGGAGACAG...CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR GCA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTGTCTCCCAAACAGTaGAAAGTGGGTTGGTTCACG +
Preference number: 2 (lower is better)
Translates to: EMCPSGDKAAREAGTCASLSPKQ*KVGWFT
Trigger: CGTGAACCAACCCACTTTGCACTGTTTGGGAGACAG...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR GCA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTATCTCACTTAATCCTTaGTGTAACCCTGTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: MCPSGDKAAREAGTCASLISLNP*CNPVGW
Trigger: CCACCCCACAGGGTTACAGCAAGGATTAAGTGAGAT...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR GCA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTAGTCTGAGTCCTAACTaGAGTAAAAATCCATGGGCA +
Preference number: 2 (lower is better)
Translates to: EMCPSGDKAAREAGTCASSLSPN*SKNPWA
Trigger: TGCCCATGGATTTTTACTGCAGTTAGGACTCAGACT...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CCA 90 bp GCACTGACTCTAGCACCTGCCCTTAAACATTTCTCAGGGGTATGCCTTTTATGGTCCCAAGATCTCCCCTaGGTCTGGCAGTGTACATGC +
Preference number: 2 (lower is better)
Translates to: ALTLAPALKHFSGVCLLWSQDLP*VWQCTC
Trigger: GCATGTACACTGCCAGACCCAGGGGAGATCTTGGGA...CCATAAAAGGCATACCCCTGAGAAATGTTTAAGGGCAGGTGCTAGAGTCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR TCA 90 bp GCACTGACTCTAGCACCTGCCCTTAAACATTTCTCAGGGGTATGCCTTTTATGGCTAAGCTTCCTTCCTTaGACCATGGGTCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: ALTLAPALKHFSGVCLLWLSFLP*TMGPEG
Trigger: TCCCTCAGGACCCATGGTTCAAGGAAGGAAGCTTAG...CCATAAAAGGCATACCCCTGAGAAATGTTTAAGGGCAGGTGCTAGAGTCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR CAA 90 bp GCCATGTTTAGCCAGGTTTCTGTCTCCCAAACAGTGCAAAGTGGGTaGGTTCACGATGACCCCACGGTTGACAGTGTGTACTTAAACTTC +
Preference number: 2 (lower is better)
Translates to: AMFSQVSVSQTVQSG*VHDDPTVDSVYLNF
Trigger: GAAGTTTAAGTACACACTGTCAACCGTGGGGTCATCGTGAACCAACCCACTTTGCACTGTTTGGGAGACAGAAACCTGGCTAAACATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR GCA 72 bp GCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTaGTCCCTTCCGGAGGGTGAGGACAAGCTGGCTACT +
Preference number: 3 (lower is better)
Translates to: AREAGTCASLLR*SLPEGEDKLAT
Trigger: AGTAGCCAGCTTGTCCTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR CCA 72 bp TTCTCCGGTGCTCCCTTCCGGAGGGTGAGGACAAGCTaGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: FSGAPFRRVRTS*LLICPSLSLLP
Trigger: TGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCTCACCCTCCGGAAGGGAGCACCGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CAA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGGCTGCCAACAGTACTaGCAGCATGCTGTGCCATGG +
Preference number: 3 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEGCQQY*QHAVPW
Trigger: CCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCC...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
3UTR-3UTR CAA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGGAAAGAAGCTGCTCTTaGTGGCCAAACACACCTGGG +
Preference number: 3 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRERSCS*WPNTPG
Trigger: CCCAGGTGTGTTTGGCCACAAAGAGCAGCTTCTTTC...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR CCA 72 bp AGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTaGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCT +
Preference number: 3 (lower is better)
Translates to: RGKGRMWGRCGA*KPGCQQYLQHA
Trigger: AGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
3UTR CCA 72 bp CGTAGCATCCTCTGTTCCCAAGATCTCCCCTGGGTCTaGCAGTGTACATGCGTGCCCTCCCCAGAGGCTCAG +
Preference number: 3 (lower is better)
Translates to: RSILCSQDLPWV*QCTCVPSPEAQ
Trigger: CTGAGCCTCTGGGGAGGGCACGCATGTACACTGCCAGACCCAGGGGAGATCTTGGGAACAGAGGATGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR CCA 72 bp GTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTaGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCA +
Preference number: 3 (lower is better)
Translates to: VRKREGQNVGSV*GLEARLPTVLA
Trigger: TGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
3UTR-3UTR CAA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTGGCTGCCAACAGTACTaGCAGCATGCTGTGCCATGG +
Preference number: 3 (lower is better)
Translates to: MCPSGDKAAREAGTCASLGCQQY*QHAVPW
Trigger: CCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCC...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CAA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTACAGTGCAAAGTGGGTaGGTTCACGATGACCCCACG +
Preference number: 3 (lower is better)
Translates to: MCPSGDKAAREAGTCASLTVQSG*VHDDPT
Trigger: CGTGGGGTCATCGTGAACCAACCCACTTTGCACTGT...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR CCA 72 bp AAATCACGTAGCATCCTCTGTTCCCAAGATCTCCCCTaGGTCTGGCAGTGTACATGCGTGCCCTCCCCAGAG +
Preference number: 3 (lower is better)
Translates to: KSRSILCSQDLP*VWQCTCVPSPE
Trigger: CTCTGGGGAGGGCACGCATGTACACTGCCAGACCCAGGGGAGATCTTGGGAACAGAGGATGCTACGTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR GCA 72 bp GTGCCATGTTTAGCCAGGTTTCTGTCTCCCAAACAGTaGAAAGTGGGTTGGTTCACGATGACCCCACGGTTG +
Preference number: 3 (lower is better)
Translates to: VPCLARFLSPKQ*KVGWFTMTPRL
Trigger: CAACCGTGGGGTCATCGTGAACCAACCCACTTTGCACTGTTTGGGAGACAGAAACCTGGCTAAACATGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR CCA 72 bp GCCAGGTTTCTGTCTCCCAAACAGTGCAAAGTGGGTTaGTTCACGATGACCCCACGGTTGACAGTGTGTACT +
Preference number: 3 (lower is better)
Translates to: ARFLSPKQCKVG*FTMTPRLTVCT
Trigger: AGTACACACTGTCAACCGTGGGGTCATCGTGAACCAACCCACTTTGCACTGTTTGGGAGACAGAAACCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CAA 90 bp AGGCAGGGACTGCCACCGCCCTGTGGAGATGAGGCACCTAAGCTTCAGGATGGAAAATCTTTGAAATCTTaGACCAGTCTGAGTCCTAAC +
Preference number: 3 (lower is better)
Translates to: RQGLPPPCGDEAPKLQDGKSLKS*TSLSPN
Trigger: GTTAGGACTCAGACTGGTCAAAGATTTCAAAGATTT...TCCATCCTGAAGCTTAGGTGCCTCATCTCCACAGGGCGGTGGCAGTCCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CAA 90 bp GAGGGAGAAGAATTCCAGGAGAATCTGAGAATGACCCTTGGGGAGCTAATGCATACAGTGCAAAGTGGGTaGGTTCACGATGACCCCACG +
Preference number: 3 (lower is better)
Translates to: EGEEFQENLRMTLGELMHTVQSG*VHDDPT
Trigger: CGTGGGGTCATCGTGAACCAACCCACTTTGCACTGT...ATGCATTAGCTCCCCAAGGGTCATTCTCAGATTCTCCTGGAATTCTTCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR TCA 72 bp TGGCGAGGCGAAAGGGTCTATAACAAAGCGAGCCCCTaGGAAAGTGACATGCATGAGGGAGTGCAATTAGAA +
Preference number: 3 (lower is better)
Translates to: WRGERVYNKASP*ESDMHEGVQLE
Trigger: TTCTAATTGCACTCCCTCATGCATGTCACTTTCTCAGGGGCTCGCTTTGTTATAGACCCTTTCGCCTCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR TCA 72 bp TTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTTaGGAAAGAAGCTGCTCTTTGTGGCCAAACACACCT +
Preference number: 3 (lower is better)
Translates to: FRSCPTATSNSF*ERSCSLWPNTP
Trigger: AGGTGTGTTTGGCCACAAAGAGCAGCTTCTTTCTCAAAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CAA 90 bp TGTCTCCTGGTGTGGTCCTTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTTCTGTGGAGAAATCTTaGAAATCTTTGACCAGTCTG +
Preference number: 3 (lower is better)
Translates to: CLLVWSFRSCPTATSNSFSVEKS*KSLTSL
Trigger: CAGACTGGTCAAAGATTTCAAAGATTTCTCCACAGA...AAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAAGGACCACACCAGGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR TCA 72 bp CAAAATCTGACCGTTATGAGAGACTGTGCCAGGTGGTaGGGACAGATGCAGATTTTACTCAGGGTCTTCCTT +
Preference number: 3 (lower is better)
Translates to: QNLTVMRDCARW*GQMQILLRVFL
Trigger: AAGGAAGACCCTGAGTAAAATCTGCATCTGTCCTCACCACCTGGCACAGTCTCTCATAACGGTCAGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR GCA 72 bp GATGAACATACAAAATCTGACCGTTATGAGAGACTGTaGCAGGTGGTGAGGACAGATGCAGATTTTACTCAG +
Preference number: 3 (lower is better)
Translates to: DEHTKSDRYERL*QVVRTDADFTQ
Trigger: CTGAGTAAAATCTGCATCTGTCCTCACCACCTGGCACAGTCTCTCATAACGGTCAGATTTTGTATGTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR-3UTR CAA 90 bp GAGGGAGAAGAATTCCAGGAGAATCTGAGAATGACCCTTGGGGAGCTAATGCATAAATCTTTGAAATCTTaGACCAGTCTGAGTCCTAAC +
Preference number: 3 (lower is better)
Translates to: EGEEFQENLRMTLGELMHKSLKS*TSLSPN
Trigger: GTTAGGACTCAGACTGGTCAAAGATTTCAAAGATTT...ATGCATTAGCTCCCCAAGGGTCATTCTCAGATTCTCCTGGAATTCTTCTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCCCAGTACACGGGGGCTaGCGCGAGCGGGGAGCGCGA +
Preference number: 4 (lower is better)
Translates to: SVWGLEARLPTVLAACCAPVHGG*RERGAR
Trigger: TCGCGCTCCCCGCTCGCGGCAGCCCCCGTGTACTGG...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR CCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATCCTCCTCCTCCGTCCTaGGCCGAGGCGGGTCCGCGA +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHPPPPS*AEAGPR
Trigger: TCGCGGACCCGCCTCGGCCCAGGACGGAGGAGGAGG...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284382.8
CDS-3UTR TCA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGCAGCCAGCAGCCACCTaGGAAGTCTCCCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRQPAAT*EVSQVS
Trigger: GCTGACCTGGGAGACTTCTCAGGTGGCTGCTGGCTG...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGACGAGCACGGGGACTCTaGGCCTTGACCTGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGRARGL*ALTCAG
Trigger: CCCCGCGCAGGTCAAGGCCCAGAGTCCCCGTGCTCG...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR GCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGTGGCAGGCAGGGACTaGCACCGCCCTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEVAGRD*HRPVEM
Trigger: CATCTCCACAGGGCGGTGGCAGTCCCTGCCTGCCAC...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCGGTCGGTGTGGGGCCTaGAAGCCAGGCTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSGRCGA*KPGCQQ
Trigger: CTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGACC...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGGATCTCCCCTGGGTCTaGCAGTGTACATGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRDLPWV*QCTCVP
Trigger: GGGCACGCATGTACACTGCCAGACCCAGGGGAGATC...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGGGACAAGCTGGCTACTaGTCTGCCCGTCCCTATCCC +
Preference number: 4 (lower is better)
Translates to: REAGTCASLLRCSLPEGEGQAGY*SARPYP
Trigger: GGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCC...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGATGTGTCCCTCTGGTaGCAAGGCCGCAAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEDVSLW*QGRKGG
Trigger: GCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATC...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGGCCCTGCAGCTGCTCTaGTTGGGGCTGATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRALQLL*LGLIFQ
Trigger: CTGGAAAATCAGCCCCAAGCAGAGCAGCTGCAGGGC...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAACCAGGACACCATCTGTaGGAGCACGGGGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEPGHHL*EHGDSG
Trigger: CCCAGAGTCCCCGTGCTCGCACAGATGGTGTCCTGG...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR CCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCGGTCGGTGTGGGGCCTaGAAGCCAGGCTGCCAACAG +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESGRCGA*KPGCQQ
Trigger: CTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGACC...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCAATGTGGGGTCGGTGTaGGGCCTGGAAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSNVGSV*GLEARL
Trigger: CAGCCTGGCTTCCAGGCCCCACACCGACCCCACATT...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGGGCAGTCAGTGACGTaGGGCGAAGCTACTGGATGG +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEGQSVT*GEATGW
Trigger: CCATCCAGTAGCTTCGCCTCACGTCACTGACTGCCC...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp AGGACAAGCTGGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGGCCTGTGAAAGCGTCCTaGGGACAGGCAAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: RTSWLLICPSLSLLPGSWPVKAS*GQARWR
Trigger: TCGCCACCTTGCCTGTCCTCAGGACGCTTTCACAGG...CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGGACAAGCTGGCTACTaGTCTGCCCGTCCCTATCCC +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEGQAGY*SARPYP
Trigger: GGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCC...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGATGTGTCCCTCTGGTaGCAAGGCCGCAAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGDVSLW*QGRKGG
Trigger: GCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATC...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTCCATTGGGAATGAGGTaGCTCTCAGCCCTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPPLGMR*LSALRP
Trigger: CGGCCTCAGGGCTGAGAGGCACCTCATTCCCAATGG...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCCCATTGGGAATGAGGTaGCTCTCAGCCCTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSPLGMR*LSALRP
Trigger: CGGCCTCAGGGCTGAGAGGCACCTCATTCCCAATGG...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp AGGACAAGCTGGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGGGGTCCCCAGGTACTGTaGTGGCCTGAAGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RTSWLLICPSLSLLPGSWGPQVL*WPEGRA
Trigger: AGCCCTTCCTTCAGGCCAGCACAGTACCTGGGGACC...CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCAATGTGGGGTCGGTGTaGGGCCTGGAAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESNVGSV*GLEARL
Trigger: CAGCCTGGCTTCCAGGCCCCACACCGACCCCACATT...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGCAGTGCAAAGTGGGTTaGTTCACGATGACCCCACGG +
Preference number: 4 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRQCKVG*FTMTPR
Trigger: CCGTGGGGTCATCGTGAACCAACCCACTTTGCACTG...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAACCCCAGGTACTGTGCTaGCCTGAAGGAAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEPQVLC*PEGRAQ
Trigger: CTGAGCCCTTCCTTCAGGCCAGCACAGTACCTGGGG...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCAAGCAACCTGGCCTaGATCCCATTCCCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEASNLA*IPFPRG
Trigger: TCCACGGGGGAATGGGATCCAGGCCAGGTTGCTTGC...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp AGGACAAGCTGGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGGGCAAGCAACCTGGCCTaGATCCCATTCCCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: RTSWLLICPSLSLLPGSWASNLA*IPFPRG
Trigger: TCCACGGGGGAATGGGATCCAGGCCAGGTTGCTTGC...CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCGCTCAGCAAGCAACCTaGCCTGGATCCCATTCCCCC +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSAQQAT*PGSHSP
Trigger: GGGGGAATGGGATCCAGGCCAGGTTGCTTGCTGAGC...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGAGCCGACCTCTCCTGTaGCTTTCTAGTACGAGCCCC +
Preference number: 4 (lower is better)
Translates to: REAGTCASLLRCSLPEGESRPLL*LSSTSP
Trigger: GGGGCTCGTACTAGAAAGCCACAGGAGAGGTCGGCT...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAATGGGCACTGTCGCCCTaGAGCGCTCCTAACGGACTT +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEWALSP*SAPNGL
Trigger: AAGTCCGTTAGGAGCGCTCCAGGGCGACAGTGCCCA...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394113.5
ENST00000538112.6
CDS-3UTR CCA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCCCACTTGTTAACCGCTaGGCACTGTCGCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SVWGLEARLPTVLAACCAPLVNR*ALSPWS
Trigger: GCTCCAGGGCGACAGTGCCCAGCGGTTAACAAGTGG...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR TCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGGGCAGTCAGTGACGTaGGGCGAAGCTACTGGATGG +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGGQSVT*GEATGW
Trigger: CCATCCAGTAGCTTCGCCTCACGTCACTGACTGCCC...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTACTGAGGGCAGTCAGTaGCGTGAGGCGAAGCTACTG +
Preference number: 4 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPTEGSQ*REAKLL
Trigger: CAGTAGCTTCGCCTCACGTCACTGACTGCCCTCAGT...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGCTGGAAGGCCTCTCTTaGTTCCGCCGACTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: REAGTCASLLRCSLPEGELEGLS*FRRLLN
Trigger: GTTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAG...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGCCTGTGAAAGCGTCCTaGGGACAGGCAAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMPVKAS*GQARWR
Trigger: TCGCCACCTTGCCTGTCCTCAGGACGCTTTCACAGG...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGTGCTCTGCTTGGGGCTaGTTTTCCAGTCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRCSAWG*FSSPYK
Trigger: CTTGTAGGGACTGGAAAATCAGCCCCAAGCAGAGCA...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGGCCTGGAAGCCAGGCTaGCAACAGTACTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: REAGTCASLLRCSLPEGEAWKPG*QQYLQH
Trigger: ATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTGGCAGTGTACATGCGTaGCCTCCCCAGAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: MCPSGDKAAREAGTCASLGSVHA*PPQRLR
Trigger: CCTGAGCCTCTGGGGAGGGCACGCATGTACACTGCC...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp AGGCAGGGACTGCCACCGCCCTGTGGAGATGAGGCACCTAAGCTTCAGGATGGAGTCTGGCAGTGTACATaGGTGCCCTCCCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RQGLPPPCGDEAPKLQDGVWQCT*VPSPEA
Trigger: AGCCTCTGGGGAGGGCACGCATGTACACTGCCAGAC...TCCATCCTGAAGCTTAGGTGCCTCATCTCCACAGGGCGGTGGCAGTCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCGCAAGTCTTCTCCGGTaGTCCCTTCCGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESASLLR*SLPEGE
Trigger: CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGC...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGCAAGTCTTCTCCGGTaGTCCCTTCCGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGASLLR*SLPEGE
Trigger: CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGC...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGGCAGGGACGTGTaGAAGTCTTCTCCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMGGRDV*KSSPVL
Trigger: GAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCC...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp AGGCAGGGACTGCCACCGCCCTGTGGAGATGAGGCACCTAAGCTTCAGGATGGAGGAGGCAGGGACGTGTaGAAGTCTTCTCCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RQGLPPPCGDEAPKLQDGGGRDV*KSSPVL
Trigger: GAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCC...TCCATCCTGAAGCTTAGGTGCCTCATCTCCACAGGGCGGTGGCAGTCCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAACAGCCCTGCACATTGTaGCCAGGAGATGTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEQPCTL*PGDVSL
Trigger: GAGGGACACATCTCCTGGGCACAATGTGCAGGGCTG...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGGCAGCAGGGGCTGTTTaGGATAGCCATTCCAAACCT +
Preference number: 4 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRAAGAV*DSHSKP
Trigger: AGGTTTGGAATGGCTATCCCAAACAGCCCCTGCTGC...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCCCCAGGTACTGTGCTaGCCTGAAGGAAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: EMCPSGDKAAREAGTCASPQVLC*PEGRAQ
Trigger: CTGAGCCCTTCCTTCAGGCCAGCACAGTACCTGGGG...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGATCTCCCCTGGGTCTaGCAGTGTACATGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHDLPWV*QCTCVP
Trigger: GGGCACGCATGTACACTGCCAGACCCAGGGGAGATC...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGTCCCAAGATCTCCCCTaGGTCTGGCAGTGTACATGC +
Preference number: 4 (lower is better)
Translates to: REAGTCASLLRCSLPEGESQDLP*VWQCTC
Trigger: GCATGTACACTGCCAGACCCAGGGGAGATCTTGGGA...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAAGGGTGAGGACAAGCTaGCTACTGATCTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLERVRTS*LLICPS
Trigger: GGACGGGCAGATCAGTAGCCAGCTTGTCCTCACCCT...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCTGGGCACTGTCGCCCTaGAGCGCTCCTAACGGACTT +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESWALSP*SAPNGL
Trigger: AAGTCCGTTAGGAGCGCTCCAGGGCGACAGTGCCCA...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATACTGAGGGCAGTCAGTaGCGTGAGGCGAAGCTACTG +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHTEGSQ*REAKLL
Trigger: CAGTAGCTTCGCCTCACGTCACTGACTGCCCTCAGT...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAACTGAGGGCAGTCAGTaGCGTGAGGCGAAGCTACTG +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGTEGSQ*REAKLL
Trigger: CAGTAGCTTCGCCTCACGTCACTGACTGCCCTCAGT...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCGGTGCCCCTTGCTTGTaGAGTGTAGTCAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSGAPCL*SVVREQ
Trigger: CTGCTCTCTGACTACACTTCACAAGCAAGGGGCACC...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAAGACGAGTCCATCGTaGTCCTCAAGATCTGACCAC +
Preference number: 4 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRKTSPS*SSRSDH
Trigger: GTGGTCAGATCTTGAGGATCACGATGGACTCGTCTT...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGCTGCCAACAGTACTTaGAGCATGCTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPAANST*SMLCHG
Trigger: CCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGC...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCGCCTGGAAGCCAGGCTaGCAACAGTACTTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSAWKPG*QQYLQH
Trigger: ATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGCTCCTAACGGACTTTaGAAGGCCCAGTACACGGGG +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHAPNGL*KAQYTG
Trigger: CCCCGTGTACTGGGCCTTGCAAAGTCCGTTAGGAGC...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR CCA 90 bp AGGCAGGGACTGCCACCGCCCTGTGGAGATGAGGCACCTAAGCTTCAGGATGGAGTACCAGTACTGGGATaGCAGCAGGGGCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: RQGLPPPCGDEAPKLQDGVPVLG*QQGLFG
Trigger: CCCAAACAGCCCCTGCTGCCATCCCAGTACTGGTAC...TCCATCCTGAAGCTTAGGTGCCTCATCTCCACAGGGCGGTGGCAGTCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGTACCAGTACTGGGATaGCAGCAGGGGCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHVPVLG*QQGLFG
Trigger: CCCAAACAGCCCCTGCTGCCATCCCAGTACTGGTAC...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGTACCAGTACTGGGATaGCAGCAGGGGCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMVPVLG*QQGLFG
Trigger: CCCAAACAGCCCCTGCTGCCATCCCAGTACTGGTAC...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCCAGCATGCTGTGCCATaGGAGTCCTGTAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SVWGLEARLPTVLAACCAQHAVP*ESCRLP
Trigger: TGGAAGCCTACAGGACTCCCATGGCACAGCATGCTG...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCAAGTGTCTCCTGGTGTaGTCCTTCCGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESKCLLV*SFRSCP
Trigger: GGGACAGGAGCGGAAGGACCACACCAGGAGACACTT...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTCAGTGCAAAGTGGGTTaGTTCACGATGACCCCACGG +
Preference number: 4 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPQCKVG*FTMTPR
Trigger: CCGTGGGGTCATCGTGAACCAACCCACTTTGCACTG...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCAGGGTGAGGACAAGCTaGCTACTGATCTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESRVRTS*LLICPS
Trigger: GGACGGGCAGATCAGTAGCCAGCTTGTCCTCACCCT...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCAGCCGACCTCTCCTGTaGCTTTCTAGTACGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GLEARLPTVLAACCAMGVSRPLL*LSSTSP
Trigger: GGGGCTCGTACTAGAAAGCCACAGGAGAGGTCGGCT...GACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCAAACTTGTTAACCGCTaGGCACTGTCGCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSKLVNR*ALSPWS
Trigger: GCTCCAGGGCGACAGTGCCCAGCGGTTAACAAGTTT...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538112.6
CDS-3UTR TCA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCCCCTCAGGTTCTTCCTaGTGGGATGTTGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SVWGLEARLPTVLAACCAPSGSS*WDVASC
Trigger: ACAGGAAGCAACATCCCATCAGGAAGAACCTGAGGG...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAACCCTCAGGTTCTTCCTaGTGGGATGTTGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEPSGSS*WDVASC
Trigger: ACAGGAAGCAACATCCCATCAGGAAGAACCTGAGGG...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGCGAGTCAAGATTTCTaGCTGAGGGCAGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPASQDF*LRAVSD
Trigger: GTCACTGACTGCCCTCAGTCAGAAATCTTGACTCGC...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGTGCCCCTTGCTTGTaGAGTGTAGTCAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMGAPCL*SVVREQ
Trigger: CTGCTCTCTGACTACACTTCACAAGCAAGGGGCACC...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCCTGGAAGGCCTCTCTTaGTTCCGCCGACTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESLEGLS*FRRLLN
Trigger: GTTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAG...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGCTGGAAGGCCTCTCTTaGTTCCGCCGACTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMLEGLS*FRRLLN
Trigger: GTTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAG...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCGGTGCCTCTCAGCCCTaGGGCCGTTCTTTAAACAAT +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSGASQP*GRSLNN
Trigger: ATTGTTTAAAGAACGGCCTCAGGGCTGAGAGGCACC...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp AGGACAAGCTGGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGGTGCTCTGCTTGGGGCTaGTTTTCCAGTCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: RTSWLLICPSLSLLPGSWCSAWG*FSSPYK
Trigger: CTTGTAGGGACTGGAAAATCAGCCCCAAGCAGAGCA...CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATCTTCTGGCAGTGGTGTaGAGCATGCCTCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHLLAVV*SMPQEM
Trigger: CATCTCCTGAGGCATGCTTCACACCACTGCCAGAAG...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR GCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAACTTGCAGCATGCTGTaGCATGGGAGTCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGTCSML*HGSPVG
Trigger: GCCTACAGGACTCCCATGGCACAGCATGCTGCAAGT...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTACAGTACTTGCAGCATaGTGTGCCATGGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPTVLAA*CAMGVL
Trigger: CAGGACTCCCATGGCACAGCATGCTGCAAGTACTGT...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCGCTGCCAACAGTACTTaGAGCATGCTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESAANST*SMLCHG
Trigger: CCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGC...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCACGCAGTCTGTTCTGTaGAGTGTCCTTCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESTQSVL*SVLPAP
Trigger: TGGAGCCGGAAGGACACTGCACAGAACAGACTGCGT...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGTGAGGCGAAGCTACTaGATGGCACCCTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHVRRSY*MAPSGS
Trigger: AGAACCTGAGGGTGCCATCCAGTAGCTTCGCCTCAC...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR CCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCGTGAGGCGAAGCTACTaGATGGCACCCTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESVRRSY*MAPSGS
Trigger: AGAACCTGAGGGTGCCATCCAGTAGCTTCGCCTCAC...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR CCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGCAGCAGGGGCTGTTTaGGATAGCCATTCCAAACCT +
Preference number: 4 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPAAGAV*DSHSKP
Trigger: AGGTTTGGAATGGCTATCCCAAACAGCCCCTGCTGC...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp GGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCAGCATGCTGTGCCATaGGAGTCCTGTAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLEARLPTVLAACCAMGVQHAVP*ESCRLP
Trigger: TGGAAGCCTACAGGACTCCCATGGCACAGCATGCTG...GACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGACAGCATGCTGTGCCATaGGAGTCCTGTAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGQHAVP*ESCRLP
Trigger: TGGAAGCCTACAGGACTCCCATGGCACAGCATGCTG...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp AGGCAGGGACTGCCACCGCCCTGTGGAGATGAGGCACCTAAGCTTCAGGATGGACAGCATGCTGTGCCATaGGAGTCCTGTAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RQGLPPPCGDEAPKLQDGQHAVP*ESCRLP
Trigger: TGGAAGCCTACAGGACTCCCATGGCACAGCATGCTG...TCCATCCTGAAGCTTAGGTGCCTCATCTCCACAGGGCGGTGGCAGTCCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCGATGGAAGTGTCTCCTaGTGTGGTCCTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLEARLPTVLAACCAMGVDGSVS*CGPSAP
Trigger: AGGAGCGGAAGGACCACACCAGGAGACACTTCCATC...GACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCTCCCAAGATCTCCCCTaGGTCTGGCAGTGTACATGC +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESSQDLP*VWQCTC
Trigger: GCATGTACACTGCCAGACCCAGGGGAGATCTTGGGA...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCGTTTGGCCAGAGCAGTaGGGACCAGAGGGAATAACG +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESVWPEQ*GPEGIT
Trigger: CGTTATTCCCTCTGGTCCCCACTGCTCTGGCCAAAC...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR CCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAAGCAGAGAGAAGGTTTaGCCAGAGCAGTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGSREKV*PEQWGP
Trigger: TGGTCCCCACTGCTCTGGCCAAACCTTCTCTCTGCT...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR CCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGCAGCTCTTCTGGCAGTaGTGTGAAGCATGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMQLFWQ*CEACLR
Trigger: CCTGAGGCATGCTTCACACCACTGCCAGAAGAGCTG...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR CCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAATTCTGGCAGCTCTTCTaGCAGTGGTGTGAAGCATGC +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEFWQLF*QWCEAC
Trigger: GCATGCTTCACACCACTGCCAGAAGAGCTGCCAGAA...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR CCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCTCCTGTTTCACCACCTaGGTGGGGTTAGCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESSCFTT*VGLASR
Trigger: TCTGGACGCTAACCCCACCCAGGTGGTGAAACAGGA...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538112.6
CDS-3UTR TCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATCCCTCAGGTTCTTCCTaGTGGGATGTTGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHPSGSS*WDVASC
Trigger: ACAGGAAGCAACATCCCATCAGGAAGAACCTGAGGG...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTGCGAGTCAAGATTTCTaGCTGAGGGCAGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: EMCPSGDKAAREAGTCASASQDF*LRAVSD
Trigger: GTCACTGACTGCCCTCAGTCAGAAATCTTGACTCGC...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284382.8
CDS-3UTR TCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGCGAGTCAAGATTTCTaGCTGAGGGCAGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGASQDF*LRAVSD
Trigger: GTCACTGACTGCCCTCAGTCAGAAATCTTGACTCGC...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGGTGATCCTCAAGATCTaGCCACTTTATTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRVILKI*PLYCWR
Trigger: CCTCCAACAATAAAGTGGTCAGATCTTGAGGATCAC...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAAAGACGAGTCCATCGTaGTCCTCAAGATCTGACCAC +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEKTSPS*SSRSDH
Trigger: GTGGTCAGATCTTGAGGATCACGATGGACTCGTCTT...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTGGAAGGCCTCTCTTaGTTCCGCCGACTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: MCPSGDKAAREAGTCASLLEGLS*FRRLLN
Trigger: GTTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAG...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGAAGAAAGGCTCGAGGTaGTACATAGGCAAGATCAGC +
Preference number: 4 (lower is better)
Translates to: REAGTCASLLRCSLPEGEKKGSR*YIGKIS
Trigger: GCTGATCTTGCCTATGTATCACCTCGAGCCTTTCTT...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTGGTGCCTCTCAGCCCTaGGGCCGTTCTTTAAACAAT +
Preference number: 4 (lower is better)
Translates to: EMCPSGDKAAREAGTCASGASQP*GRSLNN
Trigger: ATTGTTTAAAGAACGGCCTCAGGGCTGAGAGGCACC...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGTGCCTCTCAGCCCTaGGGCCGTTCTTTAAACAAT +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMGASQP*GRSLNN
Trigger: ATTGTTTAAAGAACGGCCTCAGGGCTGAGAGGCACC...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGGTGCCTCTCAGCCCTaGGGCCGTTCTTTAAACAAT +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGGASQP*GRSLNN
Trigger: ATTGTTTAAAGAACGGCCTCAGGGCTGAGAGGCACC...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCAACAAAGCGAGCCCCTaGGAAAGTGACATGCATGAG +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSNKASP*ESDMHE
Trigger: CTCATGCATGTCACTTTCTCAGGGGCTCGCTTTGTT...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCCTAAGCTTCCTTCCTTaGACCATGGGTCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESLSFLP*TMGPEG
Trigger: TCCCTCAGGACCCATGGTTCAAGGAAGGAAGCTTAG...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATCTAAGCTTCCTTCCTTaGACCATGGGTCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHLSFLP*TMGPEG
Trigger: TCCCTCAGGACCCATGGTTCAAGGAAGGAAGCTTAG...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp TGTCTCCTGGTGTGGTCCTTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTCAGCCAGCAGCCACCTaGGAAGTCTCCCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: CLLVWSFRSCPTATSNSFQPAAT*EVSQVS
Trigger: GCTGACCTGGGAGACTTCTCAGGTGGCTGCTGGCTG...AAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAAGGACCACACCAGGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGTTCCTGATGGGATGTTaGTTCCTGTTTCACCACCTC +
Preference number: 4 (lower is better)
Translates to: REAGTCASLLRCSLPEGEFLMGC*FLFHHL
Trigger: GAGGTGGTGAAACAGGAAGCAACATCCCATCAGGAA...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284382.8
CDS-3UTR GCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGTCAGTCCACAAAAGGTaGCCCTTGCTTGTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: REAGTCASLLRCSLPEGESVHKR*PLLVKC
Trigger: ACACTTCACAAGCAAGGGGCACCTTTTGTGGACTGA...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGACAGTACTTGCAGCATaGTGTGCCATGGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMTVLAA*CAMGVL
Trigger: CAGGACTCCCATGGCACAGCATGCTGCAAGTACTGT...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAACAGTACTTGCAGCATaGTGTGCCATGGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGTVLAA*CAMGVL
Trigger: CAGGACTCCCATGGCACAGCATGCTGCAAGTACTGT...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTACAGTACTTGCAGCATaGTGTGCCATGGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: EMCPSGDKAAREAGTCASTVLAA*CAMGVL
Trigger: CAGGACTCCCATGGCACAGCATGCTGCAAGTACTGT...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCCTGTCTCCCAAACAGTaGAAAGTGGGTTGGTTCACG +
Preference number: 4 (lower is better)
Translates to: SVWGLEARLPTVLAACCALSPKQ*KVGWFT
Trigger: CGTGAACCAACCCACTTTGCACTGTTTGGGAGACAG...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGGGTGGTGAGGACAGATaGAGATTTTACTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: REAGTCASLLRCSLPEGEGGEDR*RFYSGS
Trigger: AGACCCTGAGTAAAATCTGCATCTGTCCTCACCACC...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTCGTTATGAGAGACTGTaGCAGGTGGTGAGGACAGAT +
Preference number: 4 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPRYERL*QVVRTD
Trigger: ATCTGTCCTCACCACCTGGCACAGTCTCTCATAACG...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAACAGTGGTGTGAAGCATaGCTCAGGAGATGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEQWCEA*LRRWRN
Trigger: GTTTCTCCATCTCCTGAGGCATGCTTCACACCACTG...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR CCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCAACCATCTTTCCACCTaGCGCTCCGTCAAGTTACAC +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSNHLST*RSVKLH
Trigger: GTGTAACTTGACGGAGCGCCAGGTGGAAAGATGGTT...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAAACCATCTTTCCACCTaGCGCTCCGTCAAGTTACAC +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLENHLST*RSVKLH
Trigger: GTGTAACTTGACGGAGCGCCAGGTGGAAAGATGGTT...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGCAGCAGGGGCTGTTTaGGATAGCCATTCCAAACCT +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGAAGAV*DSHSKP
Trigger: AGGTTTGGAATGGCTATCCCAAACAGCCCCTGCTGC...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCGCAGCAGGGGCTGTTTaGGATAGCCATTCCAAACCT +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESAAGAV*DSHSKP
Trigger: AGGTTTGGAATGGCTATCCCAAACAGCCCCTGCTGC...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTACGTCCAAAACATTCTaGCAGCTCTTCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPTSKTF*QLFWQW
Trigger: CCACTGCCAGAAGAGCTGCCAGAATGTTTTGGACGT...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR TCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCAAGACGAGTCCATCGTaGTCCTCAAGATCTGACCAC +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESKTSPS*SSRSDH
Trigger: GTGGTCAGATCTTGAGGATCACGATGGACTCGTCTT...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAAAGACGAGTCCATCGTaGTCCTCAAGATCTGACCAC +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGKTSPS*SSRSDH
Trigger: GTGGTCAGATCTTGAGGATCACGATGGACTCGTCTT...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAACAGCCAGGTGGTGGATaGTATGAGCTAGAAAATCCT +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEQPGGG*YELENP
Trigger: AGGATTTTCTAGCTCATATCATCCACCACCTGGCTG...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCCAGCCAGGTGGTGGATaGTATGAGCTAGAAAATCCT +
Preference number: 4 (lower is better)
Translates to: SVWGLEARLPTVLAACCAQPGGG*YELENP
Trigger: AGGATTTTCTAGCTCATATCATCCACCACCTGGCTG...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAAAGAAAGGCTCGAGGTaGTACATAGGCAAGATCAGC +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEKKGSR*YIGKIS
Trigger: GCTGATCTTGCCTATGTATCACCTCGAGCCTTTCTT...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCAACAAAGCGAGCCCCTaGGAAAGTGACATGCATGAG +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESNKASP*ESDMHE
Trigger: CTCATGCATGTCACTTTCTCAGGGGCTCGCTTTGTT...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAATGTTGTGTTTCACTGTaGTGCAGGCTGATTGGGTTG +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLECCVSL*CRLIGL
Trigger: CAACCCAATCAGCCTGCATCACAGTGAAACACAACA...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGACTGTGCCAGGTGGTaGGGACAGATGCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHDCARW*GQMQIL
Trigger: TAAAATCTGCATCTGTCCTCACCACCTGGCACAGTC...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGACTGTGCCAGGTGGTaGGGACAGATGCAGATTTTA +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGDCARW*GQMQIL
Trigger: TAAAATCTGCATCTGTCCTCACCACCTGGCACAGTC...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp TGTCTCCTGGTGTGGTCCTTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTCCATTGGGAATGAGGTaGCTCTCAGCCCTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: CLLVWSFRSCPTATSNSFPLGMR*LSALRP
Trigger: CGGCCTCAGGGCTGAGAGGCACCTCATTCCCAATGG...AAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAAGGACCACACCAGGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGCTGTCTCCCAAACAGTaGAAAGTGGGTTGGTTCACG +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMLSPKQ*KVGWFT
Trigger: CGTGAACCAACCCACTTTGCACTGTTTGGGAGACAG...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAATTCCTGATGGGATGTTaGTTCCTGTTTCACCACCTG +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEFLMGC*FLFHHL
Trigger: CAGGTGGTGAAACAGGAAGCAACATCCCATCAGGAA...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538112.6
CDS-3UTR TCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTTCTCTGTGTAAGACCTaGAATTCCTTCAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPSLCKT*NSFRDP
Trigger: TGGGTCTCTGAAGGAATTTCAGGTCTTACACAGAGA...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCGTGATCCTCAAGATCTaGCCACTTTATTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSVILKI*PLYCWR
Trigger: CCTCCAACAATAAAGTGGTCAGATCTTGAGGATCAC...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGACAGCCAGGTGGTGGATaGTATGAGCTAGAAAATCCT +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGQPGGG*YELENP
Trigger: AGGATTTTCTAGCTCATATCATCCACCACCTGGCTG...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCAGCCAGGTGGTGGATaGTATGAGCTAGAAAATCCT +
Preference number: 4 (lower is better)
Translates to: EMCPSGDKAAREAGTCASQPGGG*YELENP
Trigger: AGGATTTTCTAGCTCATATCATCCACCACCTGGCTG...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTTTGAACCATGGGTCCTaGGGGAGAAGAATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MCPSGDKAAREAGTCASLLNHGS*GRRIPG
Trigger: TCCTGGAATTCTTCTCCCTCAGGACCCATGGTTCAA...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGATGTTGTGTTTCACTGTaGTGCAGGCTGATTGGGTTG +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGCCVSL*CRLIGL
Trigger: CAACCCAATCAGCCTGCATCACAGTGAAACACAACA...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCTCATCTGAAGAATCCTaGGCCCTTGTTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSSSEES*ALVSCR
Trigger: TCTACAGGAAACAAGGGCTCAGGATTCTTCAGATGA...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCTCATCTGAAGAATCCTaGGCCCTTGTTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SVWGLEARLPTVLAACCASSEES*ALVSCR
Trigger: TCTACAGGAAACAAGGGCTCAGGATTCTTCAGATGA...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGACCCACCCTCCAAAGTTaGGAGTCAAGATTTCTGACT +
Preference number: 4 (lower is better)
Translates to: WGLEARLPTVLAACCAMGPTLQS*ESRFLT
Trigger: AGTCAGAAATCTTGACTCGCAACTTTGGAGGGTGGG...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR GCA 90 bp GGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCCCACCCTCCAAAGTTaGGAGTCAAGATTTCTGACT +
Preference number: 4 (lower is better)
Translates to: GLEARLPTVLAACCAMGVPTLQS*ESRFLT
Trigger: AGTCAGAAATCTTGACTCGCAACTTTGGAGGGTGGG...GACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR GCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCTCAGTCCACAAAAGGTaGCCCTTGCTTGTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESSVHKR*PLLVKC
Trigger: ACACTTCACAAGCAAGGGGCACCTTTTGTGGACTGA...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp AGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGAGGGTGAGAGTCTGAGTCCTAACTaGAGTAAAAATCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: REAGTCASLLRCSLPEGESLSPN*SKNPWA
Trigger: TGCCCATGGATTTTTACTGCAGTTAGGACTCAGACT...CTCACCCTCCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GCACTGACTCTAGCACCTGCCCTTAAACATTTCTCAGGGGTATGCCTTTTATGGGTGGCAGGCAGGGACTaGCACCGCCCTGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: ALTLAPALKHFSGVCLLWVAGRD*HRPVEM
Trigger: CATCTCCACAGGGCGGTGGCAGTCCCTGCCTGCCAC...CCATAAAAGGCATACCCCTGAGAAATGTTTAAGGGCAGGTGCTAGAGTCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTATCTCACTTAATCCTTaGTGTAACCCTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: EMCPSGDKAAREAGTCASISLNP*CNPVGW
Trigger: CCACCCCACAGGGTTACAGCAAGGATTAAGTGAGAT...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTTTTGTTCAGGCCCATTaGAGTGCCATGTTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: EMCPSGDKAAREAGTCASFVQAH*SAMFSQ
Trigger: CTGGCTAAACATGGCACTGCAATGGGCCTGAACAAA...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATTTTGTTCAGGCCCATTaGAGTGCCATGTTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHFVQAH*SAMFSQ
Trigger: CTGGCTAAACATGGCACTGCAATGGGCCTGAACAAA...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGTGGTGAGGACAGATaGAGATTTTACTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHGGEDR*RFYSGS
Trigger: AGACCCTGAGTAAAATCTGCATCTGTCCTCACCACC...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp TGTCTCCTGGTGTGGTCCTTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTAAGTGTCTCCTGGTGTaGTCCTTCCGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CLLVWSFRSCPTATSNSFKCLLV*SFRSCP
Trigger: GGGACAGGAGCGGAAGGACCACACCAGGAGACACTT...AAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAAGGACCACACCAGGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGTCTCTGTGTAAGACCTaGAATTCCTTCAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMSLCKT*NSFRDP
Trigger: TGGGTCTCTGAAGGAATTTCAGGTCTTACACAGAGA...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATTCTCTGTGTAAGACCTaGAATTCCTTCAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHSLCKT*NSFRDP
Trigger: TGGGTCTCTGAAGGAATTTCAGGTCTTACACAGAGA...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR TCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGTGATCCTCAAGATCTaGCCACTTTATTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMVILKI*PLYCWR
Trigger: CCTCCAACAATAAAGTGGTCAGATCTTGAGGATCAC...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTAAGAAAGGCTCGAGGTaGTACATAGGCAAGATCAGC +
Preference number: 4 (lower is better)
Translates to: MCPSGDKAAREAGTCASLKKGSR*YIGKIS
Trigger: GCTGATCTTGCCTATGTATCACCTCGAGCCTTTCTT...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGTTGAGGAAGATGTATaGAAAGAAAGGCTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHVEEDV*KERLEV
Trigger: CACCTCGAGCCTTTCTTTTCATACATCTTCCTCAAC...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp GGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCGTTGAGGAAGATGTATaGAAAGAAAGGCTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: GLEARLPTVLAACCAMGVVEEDV*KERLEV
Trigger: CACCTCGAGCCTTTCTTTTCATACATCTTCCTCAAC...GACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp TGTCTCCTGGTGTGGTCCTTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTACTTGCAGCATGCTGTaGCATGGGAGTCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: CLLVWSFRSCPTATSNSFTCSML*HGSPVG
Trigger: GCCTACAGGACTCCCATGGCACAGCATGCTGCAAGT...AAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAAGGACCACACCAGGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp TGTCTCCTGGTGTGGTCCTTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTGCTGCCAACAGTACTTaGAGCATGCTGTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: CLLVWSFRSCPTATSNSFAANST*SMLCHG
Trigger: CCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGC...AAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAAGGACCACACCAGGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAAGTCTGAGTCCTAACTaGAGTAAAAATCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: AVVRKREGQNVGSVWGLESLSPN*SKNPWA
Trigger: TGCCCATGGATTTTTACTGCAGTTAGGACTCAGACT...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GAGGGAGAAGAATTCCAGGAGAATCTGAGAATGACCCTTGGGGAGCTAATGCATGGCAGTGTACATGCGTaGCCTCCCCAGAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: EGEEFQENLRMTLGELMHGSVHA*PPQRLR
Trigger: CCTGAGCCTCTGGGGAGGGCACGCATGTACACTGCC...ATGCATTAGCTCCCCAAGGGTCATTCTCAGATTCTCCTGGAATTCTTCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCTTCCTGATGGGATGTTaGTTCCTGTTTCACCACTTG +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESFLMGC*FLFHHL
Trigger: CAAGTGGTGAAACAGGAAGCAACATCCCATCAGGAA...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR CCA 90 bp GAGGGAGAAGAATTCCAGGAGAATCTGAGAATGACCCTTGGGGAGCTAATGCATAATGTGGGGTCGGTGTaGGGCCTGGAAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EGEEFQENLRMTLGELMHNVGSV*GLEARL
Trigger: CAGCCTGGCTTCCAGGCCCCACACCGACCCCACATT...ATGCATTAGCTCCCCAAGGGTCATTCTCAGATTCTCCTGGAATTCTTCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTGTGATCCTCAAGATCTaGCCACTTTATTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: MCPSGDKAAREAGTCASLVILKI*PLYCWR
Trigger: CCTCCAACAATAAAGTGGTCAGATCTTGAGGATCAC...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCAGGTGGTGGATGATATaGGCTAGAAAATCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESRWWMI*ARKSFL
Trigger: GAGAAAGGATTTTCTAGCTCATATCATCCACCACCT...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTGTTGAGGAAGATGTATaGAAAGAAAGGCTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: MCPSGDKAAREAGTCASLVEEDV*KERLEV
Trigger: CACCTCGAGCCTTTCTTTTCATACATCTTCCTCAAC...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATACCCTCTTCTCAATTTaGAACGTAGAAACCCACGAA +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHTLFSI*NVETHE
Trigger: TTCGTGGGTTTCTACGTTGCAAATTGAGAAGAGGGT...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538112.6
CDS-3UTR CCA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTTCACTCCTCACATCCTaGATGCTCTTCATGAATATA +
Preference number: 4 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPSLLTS*MLFMNI
Trigger: TATATTCATGAAGAGCATCCAGGATGTGAGGAGTGA...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp GAGGGAGAAGAATTCCAGGAGAATCTGAGAATGACCCTTGGGGAGCTAATGCATGCTCAGCAAGCAACCTaGCCTGGATCCCATTCCCCC +
Preference number: 4 (lower is better)
Translates to: EGEEFQENLRMTLGELMHAQQAT*PGSHSP
Trigger: GGGGGAATGGGATCCAGGCCAGGTTGCTTGCTGAGC...ATGCATTAGCTCCCCAAGGGTCATTCTCAGATTCTCCTGGAATTCTTCTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
3UTR CAA 72 bp AGCCAGGTTTCTGTCTCCCAAACAGTGCAAAGTGGGTaGGTTCACGATGACCCCACGGTTGACAGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: SQVSVSQTVQSG*VHDDPTVDSVY
Trigger: GTACACACTGTCAACCGTGGGGTCATCGTGAACCAACCCACTTTGCACTGTTTGGGAGACAGAAACCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGTCTAGTACGAGCCCCTaGATAAATAGGATGAACATA +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMSSTSP*INRMNI
Trigger: TATGTTCATCCTATTTATTCAGGGGCTCGTACTAGA...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCTCAGTTTGCAATGGTTaGCTTGTGGAATGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SVWGLEARLPTVLAACCASVCNG*LVECLK
Trigger: TTTCAAACATTCCACAAGGCAACCATTGCAAACTGA...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCTCAGTTTGCAATGGTTaGCTTGTGGAATGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSSVCNG*LVECLK
Trigger: TTTCAAACATTCCACAAGGCAACCATTGCAAACTGA...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp GCACTGACTCTAGCACCTGCCCTTAAACATTTCTCAGGGGTATGCCTTTTATGGCAGCCCTGCACATTGTaGCCAGGAGATGTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ALTLAPALKHFSGVCLLWQPCTL*PGDVSL
Trigger: GAGGGACACATCTCCTGGGCACAATGTGCAGGGCTG...CCATAAAAGGCATACCCCTGAGAAATGTTTAAGGGCAGGTGCTAGAGTCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp AGGCAGGGACTGCCACCGCCCTGTGGAGATGAGGCACCTAAGCTTCAGGATGGATCACTCCTCACATCCTaGATGCTCTTCATGAATATA +
Preference number: 4 (lower is better)
Translates to: RQGLPPPCGDEAPKLQDGSLLTS*MLFMNI
Trigger: TATATTCATGAAGAGCATCCAGGATGTGAGGAGTGA...TCCATCCTGAAGCTTAGGTGCCTCATCTCCACAGGGCGGTGGCAGTCCCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATTCACTCCTCACATCCTaGATGCTCTTCATGAATATA +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHSLLTS*MLFMNI
Trigger: TATATTCATGAAGAGCATCCAGGATGTGAGGAGTGA...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR TCA 90 bp GCACTGACTCTAGCACCTGCCCTTAAACATTTCTCAGGGGTATGCCTTTTATGGGGTGCCCCTTGCTTGTaGAGTGTAGTCAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALTLAPALKHFSGVCLLWGAPCL*SVVREQ
Trigger: CTGCTCTCTGACTACACTTCACAAGCAAGGGGCACC...CCATAAAAGGCATACCCCTGAGAAATGTTTAAGGGCAGGTGCTAGAGTCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGTCAGTTTGCAATGGTTaGCTTGTGGAATGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: VWGLEARLPTVLAACCAMSVCNG*LVECLK
Trigger: TTTCAAACATTCCACAAGGCAACCATTGCAAACTGA...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR GCA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATTCAGTTTGCAATGGTTaGCTTGTGGAATGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHSVCNG*LVECLK
Trigger: TTTCAAACATTCCACAAGGCAACCATTGCAAACTGA...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CCA 90 bp GAGGGAGAAGAATTCCAGGAGAATCTGAGAATGACCCTTGGGGAGCTAATGCATGATGGAAGTGTCTCCTaGTGTGGTCCTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: EGEEFQENLRMTLGELMHDGSVS*CGPSAP
Trigger: AGGAGCGGAAGGACCACACCAGGAGACACTTCCATC...ATGCATTAGCTCCCCAAGGGTCATTCTCAGATTCTCCTGGAATTCTTCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp GCACTGACTCTAGCACCTGCCCTTAAACATTTCTCAGGGGTATGCCTTTTATGGTTGAACCATGGGTCCTaGGGGAGAAGAATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ALTLAPALKHFSGVCLLWLNHGS*GRRIPG
Trigger: TCCTGGAATTCTTCTCCCTCAGGACCCATGGTTCAA...CCATAAAAGGCATACCCCTGAGAAATGTTTAAGGGCAGGTGCTAGAGTCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR TCA 90 bp TGTCTCCTGGTGTGGTCCTTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTTCTAGTACGAGCCCCTaGATAAATAGGATGAACATA +
Preference number: 4 (lower is better)
Translates to: CLLVWSFRSCPTATSNSFSSTSP*INRMNI
Trigger: TATGTTCATCCTATTTATTCAGGGGCTCGTACTAGA...AAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAAGGACCACACCAGGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR GCA 90 bp GCACTGACTCTAGCACCTGCCCTTAAACATTTCTCAGGGGTATGCCTTTTATGGATCTCACTTAATCCTTaGTGTAACCCTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALTLAPALKHFSGVCLLWISLNP*CNPVGW
Trigger: CCACCCCACAGGGTTACAGCAAGGATTAAGTGAGAT...CCATAAAAGGCATACCCCTGAGAAATGTTTAAGGGCAGGTGCTAGAGTCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCGGTCAGCCCTGCACATaGTGCCCAGGAGATGTGTCC +
Preference number: 5 (lower is better)
Translates to: SVWGLEARLPTVLAACCAGQPCT*CPGDVS
Trigger: GGACACATCTCCTGGGCACAATGTGCAGGGCTGACC...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCTACTCAGGGTCTTCCTaGGGAAGGCCTGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SVWGLEARLPTVLAACCAYSGSS*GRPGLS
Trigger: GGAGAGGCCAGGCCTTCCCAAGGAAGACCCTGAGTA...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS GCA 90 bp GCGAAGCTACTGGATGGCACCCTCAGGTTCTTCCTGATGGGATGTTaGTTCCTGTTTCACCACCTCCTCCTCCGTCCTGGGCCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: AKLLDGTLRFFLMGC*FLFHHLLLRPGPRR
Trigger: CCGCCTCGGCCCAGGACGGAGGAGGAGGTGGTGAAACAGGAAGCAACATCCCATCAGGAAGAACCTGAGGGTGCCATCCAGTAGCTTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284382.8
CDS GCA 90 bp GTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTaGCATGGGAGTCCTGTAGGCTTCCAGCTAATGGCCATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: VGPGSQAANSTCSML*HGSPVGFQLMAMLA
Trigger: GGCCAGCATGGCCATTAGCTGGAAGCCTACAGGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000560944.1
ENST00000679737.1
CDS GCA 90 bp TGGATGCTCTGCGCTGCACAGCTGGTACCCGGGACTGCTGAGGTTTaGACCTGGGCCTTCCGTGATTCCGAACCCAGCGCCTTACACAAC +
Preference number: 5 (lower is better)
Translates to: WMLCAAQLVPGTAEV*TWAFRDSEPSALHN
Trigger: GTTGTGTAAGGCGCTGGGTTCGGAATCACGGAAGGCCCAGGTGCAAACCTCAGCAGTCCCGGGTACCAGCTGTGCAGCGCAGAGCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560944.1
CDS CCA 90 bp CTCTGCGCTGCACAGCTGGTACCCGGGACTGCTGAGGTTTGCACCTaGGCCTTCCGTGATTCCGAACCCAGCGCCTTACACAACCTCTTC +
Preference number: 5 (lower is better)
Translates to: LCAAQLVPGTAEVCT*AFRDSEPSALHNLF
Trigger: GAAGAGGTTGTGTAAGGCGCTGGGTTCGGAATCACGGAAGGCCCAGGTGCAAACCTCAGCAGTCCCGGGTACCAGCTGTGCAGCGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560944.1
CDS-3UTR CAA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAATGGCCATGCTGGCCATaGGGAATGAGGTGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEWPCWP*GMRCLS
Trigger: TGAGAGGCACCTCATTCCCAATGGCCAGCATGGCCA...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCGGCTGCCAACAGTACTaGCAGCATGCTGTGCCATGG +
Preference number: 5 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSGCQQY*QHAVPW
Trigger: CCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCC...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCTACTCAGGGTCTTCCTaGGGAAGGCCTGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESYSGSS*GRPGLS
Trigger: GGAGAGGCCAGGCCTTCCCAAGGAAGACCCTGAGTA...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTCTGCAGCTGCTCTGCTaGGGGCTGATTTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPLQLLC*GLIFQS
Trigger: GGACTGGAAAATCAGCCCCAAGCAGAGCAGCTGCAG...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp AGGACAAGCTGGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGGCCTGGAAGGCCTCTCTaGATTCCGCCGACTCCTAAA +
Preference number: 5 (lower is better)
Translates to: RTSWLLICPSLSLLPGSWPGRPL*IPPTPK
Trigger: TTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAGG...CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTCCTGGAAGGCCTCTCTaGATTCCGCCGACTCCTAAA +
Preference number: 5 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPPGRPL*IPPTPK
Trigger: TTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAGG...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCTGGCCATGCTGGCCATaGGGAATGAGGTGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: GLEARLPTVLAACCAMGVWPCWP*GMRCLS
Trigger: TGAGAGGCACCTCATTCCCAATGGCCAGCATGGCCA...GACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCTGGCCATGCTGGCCATaGGGAATGAGGTGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESWPCWP*GMRCLS
Trigger: TGAGAGGCACCTCATTCCCAATGGCCAGCATGGCCA...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTGGCTGCCAACAGTACTaGCAGCATGCTGTGCCATGG +
Preference number: 5 (lower is better)
Translates to: EMCPSGDKAAREAGTCASGCQQY*QHAVPW
Trigger: CCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCC...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS CCA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATaGGAGTCCTGTAGGCTTCCAGCTAATGGCCATGCTGGCCATTGG +
Preference number: 5 (lower is better)
Translates to: AWKPGCQQYLQHAVP*ESCRLPANGHAGHW
Trigger: CCAATGGCCAGCATGGCCATTAGCTGGAAGCCTACAGGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000560944.1
ENST00000679737.1
CDS CCA 90 bp TTGCTTCCTGTTTCACCACTTGTTAACCGCTGGGCACTGTCGCCCTaGAGCGCTCCTAACGGACTTTGCAAGGCCCAGTACACGGGGGCT +
Preference number: 5 (lower is better)
Translates to: LLPVSPLVNRWALSP*SAPNGLCKAQYTGA
Trigger: AGCCCCCGTGTACTGGGCCTTGCAAAGTCCGTTAGGAGCGCTCCAGGGCGACAGTGCCCAGCGGTTAACAAGTGGTGAAACAGGAAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394113.5
ENST00000558884.6
CDS-3UTR CAA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATCCTGGAAGGCCTCTCTaGATTCCGCCGACTCCTAAA +
Preference number: 5 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHPGRPL*IPPTPK
Trigger: TTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAGG...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTTGGCCATGCTGGCCATaGGGAATGAGGTGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: MCPSGDKAAREAGTCASLWPCWP*GMRCLS
Trigger: TGAGAGGCACCTCATTCCCAATGGCCAGCATGGCCA...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp AGGACAAGCTGGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGGGAAAGAAGCTGCTCTTaGTGGCCAAACACACCTGGG +
Preference number: 5 (lower is better)
Translates to: RTSWLLICPSLSLLPGSWERSCS*WPNTPG
Trigger: CCCAGGTGTGTTTGGCCACAAAGAGCAGCTTCTTTC...CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGACAGTGCAAAGTGGGTaGGTTCACGATGACCCCACG +
Preference number: 5 (lower is better)
Translates to: VWGLEARLPTVLAACCAMTVQSG*VHDDPT
Trigger: CGTGGGGTCATCGTGAACCAACCCACTTTGCACTGT...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATACAGTGCAAAGTGGGTaGGTTCACGATGACCCCACG +
Preference number: 5 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHTVQSG*VHDDPT
Trigger: CGTGGGGTCATCGTGAACCAACCCACTTTGCACTGT...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTTGCAGGCTGATTGGGTaGGAAGCCAGAGGAAATCAC +
Preference number: 5 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPCRLIG*EARGNH
Trigger: GTGATTTCCTCTGGCTTCCAACCCAATCAGCCTGCA...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTGCAGCTGCTCTGCTaGGGGCTGATTTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: MCPSGDKAAREAGTCASLLQLLC*GLIFQS
Trigger: GGACTGGAAAATCAGCCCCAAGCAGAGCAGCTGCAG...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp AGGACAAGCTGGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGGACCCACCCTCCAAAGTaGCGAGTCAAGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: RTSWLLICPSLSLLPGSWTHPPK*RVKISD
Trigger: GTCAGAAATCTTGACTCGCAACTTTGGAGGGTGGGT...CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284382.8
CDS-3UTR CAA 90 bp AGGACAAGCTGGCTACTGATCTGCCCGTCCCTATCCCTCCTCCCAGGGAGCTGGCACAAAAGGTGCCCCTaGCTTGTGAAGTGTAGTCAG +
Preference number: 5 (lower is better)
Translates to: RTSWLLICPSLSLLPGSWHKRCP*LVKCSQ
Trigger: CTGACTACACTTCACAAGCAAGGGGCACCTTTTGTG...CCAGCTCCCTGGGAGGAGGGATAGGGACGGGCAGATCAGTAGCCAGCTTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTCACAAAAGGTGCCCCTaGCTTGTGAAGTGTAGTCAG +
Preference number: 5 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPHKRCP*LVKCSQ
Trigger: CTGACTACACTTCACAAGCAAGGGGCACCTTTTGTG...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGGATCTGACCACTTTATaGTTGGAGGAAGCCAGAATC +
Preference number: 5 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRDLTTL*LEEARI
Trigger: GATTCTGGCTTCCTCCAACAATAAAGTGGTCAGATC...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCCTGGAAGGCCTCTCTaGATTCCGCCGACTCCTAAA +
Preference number: 5 (lower is better)
Translates to: MCPSGDKAAREAGTCASLPGRPL*IPPTPK
Trigger: TTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAGG...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCGAAAGAAGCTGCTCTTaGTGGCCAAACACACCTGGG +
Preference number: 5 (lower is better)
Translates to: GLEARLPTVLAACCAMGVERSCS*WPNTPG
Trigger: CCCAGGTGTGTTTGGCCACAAAGAGCAGCTTCTTTC...GACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATTGCAGGCTGATTGGGTaGGAAGCCAGAGGAAATCAC +
Preference number: 5 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHCRLIG*EARGNH
Trigger: GTGATTTCCTCTGGCTTCCAACCCAATCAGCCTGCA...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCTTCCTGTTTCACCACTaGTTAACCGCTGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: SVWGLEARLPTVLAACCAFLFHH*LTAGHC
Trigger: ACAGTGCCCAGCGGTTAACAAGTGGTGAAACAGGAA...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS-3UTR CAA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGCTTCCTGATGGGATGTaGCTTCCTGTTTCACCACCT +
Preference number: 5 (lower is better)
Translates to: VWGLEARLPTVLAACCAMLPDGM*LPVSPP
Trigger: AGGTGGTGAAACAGGAAGCAACATCCCATCAGGAAG...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000538112.6
CDS-3UTR CAA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGACCCACCCTCCAAAGTaGCGAGTCAAGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: VWGLEARLPTVLAACCAMTHPPK*RVKISD
Trigger: GTCAGAAATCTTGACTCGCAACTTTGGAGGGTGGGT...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR CAA 90 bp GGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCACCCACCCTCCAAAGTaGCGAGTCAAGATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: GLEARLPTVLAACCAMGVTHPPK*RVKISD
Trigger: GTCAGAAATCTTGACTCGCAACTTTGGAGGGTGGGT...GACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
CDS-3UTR CAA 90 bp GGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCACAAAAGGTGCCCCTaGCTTGTGAAGTGTAGTCAG +
Preference number: 5 (lower is better)
Translates to: GLEARLPTVLAACCAMGVHKRCP*LVKCSQ
Trigger: CTGACTACACTTCACAAGCAAGGGGCACCTTTTGTG...GACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp AGGCAGGGACTGCCACCGCCCTGTGGAGATGAGGCACCTAAGCTTCAGGATGGACACAAAAGGTGCCCCTaGCTTGTGAAGTGTAGTCAG +
Preference number: 5 (lower is better)
Translates to: RQGLPPPCGDEAPKLQDGHKRCP*LVKCSQ
Trigger: CTGACTACACTTCACAAGCAAGGGGCACCTTTTGTG...TCCATCCTGAAGCTTAGGTGCCTCATCTCCACAGGGCGGTGGCAGTCCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCTCCATCTCTTTGCCTTaGGTAGCCTCTTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSSISLP*VASSSS
Trigger: GGAAGAAGAAGAGGCTACCAAAGGCAAAGAGATGGA...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTTCCATCTCTTTGCCTTaGGTAGCCTCTTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPSISLP*VASSSS
Trigger: GGAAGAAGAAGAGGCTACCAAAGGCAAAGAGATGGA...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS TCA 90 bp CTCCAGCAAGCTTCCTGGAATTTCTTCAGCCTGGAAGGCCTCTCTTaGTTCCGCCGACTCCTAAACCATCTTTCCACCTGGCGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: LQQASWNFFSLEGLS*FRRLLNHLSTWRSV
Trigger: GACGGAGCGCCAGGTGGAAAGATGGTTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAGGCTGAAGAAATTCCAGGAAGCTTGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000679737.1
CDS-3UTR CAA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTTCCTGATGGGATGTaGCTTCCTGTTTCACCACCT +
Preference number: 5 (lower is better)
Translates to: MCPSGDKAAREAGTCASLLPDGM*LPVSPP
Trigger: AGGTGGTGAAACAGGAAGCAACATCCCATCAGGAAG...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284382.8
CDS-3UTR CAA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGATCTGACCACTTTATaGTTGGAGGAAGCCAGAATC +
Preference number: 5 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEDLTTL*LEEARI
Trigger: GATTCTGGCTTCCTCCAACAATAAAGTGGTCAGATC...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCGATCTGACCACTTTATaGTTGGAGGAAGCCAGAATC +
Preference number: 5 (lower is better)
Translates to: SVWGLEARLPTVLAACCADLTTL*LEEARI
Trigger: GATTCTGGCTTCCTCCAACAATAAAGTGGTCAGATC...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp AGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTCTCCGGTGCTCCCTTCCGGATCAGTTTGCAATGGTaGCCTTGTGGAATGTTTGAA +
Preference number: 5 (lower is better)
Translates to: RPQGRQGRVQVFSGAPFRISLQW*PCGMFE
Trigger: TTCAAACATTCCACAAGGCAACCATTGCAAACTGAT...CCGGAAGGGAGCACCGGAGAAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGTCCATCTCTTTGCCTTaGGTAGCCTCTTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: VWGLEARLPTVLAACCAMSISLP*VASSSS
Trigger: GGAAGAAGAAGAGGCTACCAAAGGCAAAGAGATGGA...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTAAGAATCCTGAGCCCTaGTTTCCTGTAGAAAGAGTG +
Preference number: 5 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPKNPEP*FPVERV
Trigger: CACTCTTTCTACAGGAAACAAGGGCTCAGGATTCTT...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGACTTCCTGATGGGATGTaGCTTCCTGTTTCACCACTT +
Preference number: 5 (lower is better)
Translates to: WGLEARLPTVLAACCAMGLPDGM*LPVSPL
Trigger: AAGTGGTGAAACAGGAAGCAACATCCCATCAGGAAG...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS TCA 90 bp ACCCTCCAAAGTTGCGAGTCAAGATTTCTGACTGAGGGCAGTCAGTaGCGTGAGGCGAAGCTACTGGATGGCACCCTCAGGTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: TLQSCESRFLTEGSQ*REAKLLDGTLRFFL
Trigger: CAGGAAGAACCTGAGGGTGCCATCCAGTAGCTTCGCCTCACGTCACTGACTGCCCTCAGTCAGAAATCTTGACTCGCAACTTTGGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000559023.5
CDS-3UTR CAA 90 bp GTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGATCTGACCACTTTATaGTTGGAGGAAGCCAGAATC +
Preference number: 5 (lower is better)
Translates to: VWGLEARLPTVLAACCAMDLTTL*LEEARI
Trigger: GATTCTGGCTTCCTCCAACAATAAAGTGGTCAGATC...CATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp AGGCAGGGACTGCCACCGCCCTGTGGAGATGAGGCACCTAAGCTTCAGGATGGAAAGAATCCTGAGCCCTaGTTTCCTGTAGAAAGAGTG +
Preference number: 5 (lower is better)
Translates to: RQGLPPPCGDEAPKLQDGKNPEP*FPVERV
Trigger: CACTCTTTCTACAGGAAACAAGGGCTCAGGATTCTT...TCCATCCTGAAGCTTAGGTGCCTCATCTCCACAGGGCGGTGGCAGTCCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCAACCCTCTTCTCAATTaGCAACGTAGAAACCCACGA +
Preference number: 5 (lower is better)
Translates to: GLEARLPTVLAACCAMGVNPLLN*QRRNPR
Trigger: TCGTGGGTTTCTACGTTGCAAATTGAGAAGAGGGTT...GACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538112.6
CDS-3UTR CAA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAATCAGTTTGCAATGGTaGCCTTGTGGAATGTTTGAA +
Preference number: 5 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEISLQW*PCGMFE
Trigger: TTCAAACATTCCACAAGGCAACCATTGCAAACTGAT...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCTCCATAAATATCAGTTaGCAATGGTTGCCTTGTGGA +
Preference number: 5 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSSINIS*QWLPCG
Trigger: TCCACAAGGCAACCATTGCAAACTGATATTTATGGA...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp TCGGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATCATGAGCTGTAGGTaGAGGAAGATGTATGAAAAG +
Preference number: 5 (lower is better)
Translates to: SVWGLEARLPTVLAACCAIMSCR*RKMYEK
Trigger: CTTTTCATACATCTTCCTCAACCTACAGCTCATGAT...GGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAATCATGAGCTGTAGGTaGAGGAAGATGTATGAAAAG +
Preference number: 5 (lower is better)
Translates to: AVVRKREGQNVGSVWGLEIMSCR*RKMYEK
Trigger: CTTTTCATACATCTTCCTCAACCTACAGCTCATGAT...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCATCATGAGCTGTAGGTaGAGGAAGATGTATGAAAAG +
Preference number: 5 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSIMSCR*RKMYEK
Trigger: CTTTTCATACATCTTCCTCAACCTACAGCTCATGAT...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCAAACAATCCATCTCTTaGCCTTTGGTAGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESKQSIS*PLVASS
Trigger: AGAAGAGGCTACCAAAGGCAAAGAGATGGATTGTTT...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATAAACAATCCATCTCTTaGCCTTTGGTAGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHKQSIS*PLVASS
Trigger: AGAAGAGGCTACCAAAGGCAAAGAGATGGATTGTTT...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAAAACAATCCATCTCTTaGCCTTTGGTAGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: WGLEARLPTVLAACCAMGKQSIS*PLVASS
Trigger: AGAAGAGGCTACCAAAGGCAAAGAGATGGATTGTTT...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GAGATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTAAACAATCCATCTCTTaGCCTTTGGTAGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: EMCPSGDKAAREAGTCASKQSIS*PLVASS
Trigger: AGAAGAGGCTACCAAAGGCAAAGAGATGGATTGTTT...ACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAATCTGTGGAGAAATCTTaGAAATCTTTGACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: AVVRKREGQNVGSVWGLESVEKS*KSLTSL
Trigger: CAGACTGGTCAAAGATTTCAAAGATTTCTCCACAGA...TTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GAGGGAGAAGAATTCCAGGAGAATCTGAGAATGACCCTTGGGGAGCTAATGCATGGTCAGCCCTGCACATaGTGCCCAGGAGATGTGTCC +
Preference number: 5 (lower is better)
Translates to: EGEEFQENLRMTLGELMHGQPCT*CPGDVS
Trigger: GGACACATCTCCTGGGCACAATGTGCAGGGCTGACC...ATGCATTAGCTCCCCAAGGGTCATTCTCAGATTCTCCTGGAATTCTTCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTGGAAGCAAAGTAATTACAAACTaGTTAACCGCTGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: GGEKEGRAECGVGVGPGSKVITN*LTAGHC
Trigger: ACAGTGCCCAGCGGTTAACAAGTTTGTAATTACTTT...GCTTCCAGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538112.6
CDS TCA 90 bp AATTCCTTCAGAGACCCACCCTCCAAAGTTGCGAGTCAAGATTTCTaGCTGAGGGCAGTCAGTGACGTGAGGCGAAGCTACTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: NSFRDPPSKVASQDF*LRAVSDVRRSYWMA
Trigger: TGCCATCCAGTAGCTTCGCCTCACGTCACTGACTGCCCTCAGTCAGAAATCTTGACTCGCAACTTTGGAGGGTGGGTCTCTGAAGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000559023.5
CDS CCA 90 bp TGCAACGTAGAAACCCACGAAAGTAATTACAAACTTGTTAACCGCTaGGCACTGTCGCCCTGGAGCGCTCCTAACGGACTTTGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: CNVETHESNYKLVNR*ALSPWSAPNGLCKA
Trigger: GGCCTTGCAAAGTCCGTTAGGAGCGCTCCAGGGCGACAGTGCCCAGCGGTTAACAAGTTTGTAATTACTTTCGTGGGTTTCTACGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538112.6
ENST00000559639.1
CDS-3UTR CAA 90 bp GGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCATCAGTTTGCAATGGTaGCCTTGTGGAATGTTTGAA +
Preference number: 5 (lower is better)
Translates to: GLEARLPTVLAACCAMGVISLQW*PCGMFE
Trigger: TTCAAACATTCCACAAGGCAACCATTGCAAACTGAT...GACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GGTGTGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATATCAGTTTGCAATGGTaGCCTTGTGGAATGTTTGAA +
Preference number: 5 (lower is better)
Translates to: GVGPGSQAANSTCSMLCHISLQW*PCGMFE
Trigger: TTCAAACATTCCACAAGGCAACCATTGCAAACTGAT...ATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp TGGGGCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGATCCATAAATATCAGTTaGCAATGGTTGCCTTGTGGA +
Preference number: 5 (lower is better)
Translates to: WGLEARLPTVLAACCAMGSINIS*QWLPCG
Trigger: TCCACAAGGCAACCATTGCAAACTGATATTTATGGA...TCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS-3UTR CAA 90 bp GCACTGACTCTAGCACCTGCCCTTAAACATTTCTCAGGGGTATGCCTTTTATGGGGCTGCCAACAGTACTaGCAGCATGCTGTGCCATGG +
Preference number: 5 (lower is better)
Translates to: ALTLAPALKHFSGVCLLWGCQQY*QHAVPW
Trigger: CCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCC...CCATAAAAGGCATACCCCTGAGAAATGTTTAAGGGCAGGTGCTAGAGTCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GAAGGCGGTGGTGAGAAAGAGGGAAGGGCAGAATGTGGGGTCGGTGTGGGGCCTAAATCTTTGAAATCTTaGACCAGTCTGAGTCCTAAC +
Preference number: 5 (lower is better)
Translates to: EGGGEKEGRAECGVGVGPKSLKS*TSLSPN
Trigger: GTTAGGACTCAGACTGGTCAAAGATTTCAAAGATTT...AGGCCCCACACCGACCCCACATTCTGCCCTTCCCTCTTTCTCACCACCGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp AGGCAGGGACTGCCACCGCCCTGTGGAGATGAGGCACCTAAGCTTCAGGATGGATCTGTGGAGAAATCTTaGAAATCTTTGACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: RQGLPPPCGDEAPKLQDGSVEKS*KSLTSL
Trigger: CAGACTGGTCAAAGATTTCAAAGATTTCTCCACAGA...TCCATCCTGAAGCTTAGGTGCCTCATCTCCACAGGGCGGTGGCAGTCCCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS GCA 90 bp TCAGGAGATGGAGAAACTAGAGGACAATCAGCTCACAGCAATAGATaGAGTCAGCAGAGAGAAGGTTTGGCCAGAGCAGTGGGGACCAGA +
Preference number: 5 (lower is better)
Translates to: SGDGETRGQSAHSNR*SQQREGLARAVGTR
Trigger: TCTGGTCCCCACTGCTCTGGCCAAACCTTCTCTCTGCTGACTGCATCTATTGCTGTGAGCTGATTGTCCTCTAGTTTCTCCATCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394113.5
ENST00000559639.1
CDS CCA 90 bp CAAGACAGGGACGTAACAAGCTGGTCCTCCACAGCTGTGCTTCTTTaGCAACCTAAAGATGTTTCTGGCTCACAGTCCTGGCCAAACTGT +
Preference number: 5 (lower is better)
Translates to: QDRDVTSWSSTAVLL*QPKDVSGSQSWPNC
Trigger: ACAGTTTGGCCAGGACTGTGAGCCAGAAACATCTTTAGGTTGCCAAAGAAGCACAGCTGTGGAGGACCAGCTTGTTACGTCCCTGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559023.5
CDS-3UTR CAA 90 bp ATGTGTCCCTCTGGTGACAAGGCCGCAAGGGAGGCAGGGACGTGTGCAAGTCTTTCCATAAATATCAGTTaGCAATGGTTGCCTTGTGGA +
Preference number: 5 (lower is better)
Translates to: MCPSGDKAAREAGTCASLSINIS*QWLPCG
Trigger: TCCACAAGGCAACCATTGCAAACTGATATTTATGGA...AAGACTTGCACACGTCCCTGCCTCCCTTGCGGCCTTGTCACCAGAGGGACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp TGTCTCCTGGTGTGGTCCTTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTTCCATCTCTTTGCCTTaGGTAGCCTCTTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: CLLVWSFRSCPTATSNSFSISLP*VASSSS
Trigger: GGAAGAAGAAGAGGCTACCAAAGGCAAAGAGATGGA...AAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAAGGACCACACCAGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp GCCTGGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATGGGAGTCCAAATCTTTGAAATCTTaGACCAGTCTGAGTCCTAAC +
Preference number: 5 (lower is better)
Translates to: AWKPGCQQYLQHAVPWESKSLKS*TSLSPN
Trigger: GTTAGGACTCAGACTGGTCAAAGATTTCAAAGATTT...GGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS TCA 90 bp CATCCCTTTCTGAAATGTCAGTCCACAAAAGGTGCCCCTTGCTTGTaGAGTGTAGTCAGAGAGCAGCTTCCAACGTTCCAACCAGCTTCG +
Preference number: 5 (lower is better)
Translates to: HPFLKCQSTKGAPCL*SVVREQLPTFQPAS
Trigger: CGAAGCTGGTTGGAACGTTGGAAGCTGCTCTCTGACTACACTTCACAAGCAAGGGGCACCTTTTGTGGACTGACATTTCAGAAAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000559023.5
ENST00000679737.1
CDS TCA 90 bp TTCGTTCTCCTCAGAGAGCAGCACAACTCATCTCTGTGTAAGACCTaGAATTCCTTCAGAGACCCACCCTCCAAAGTTGCGAGTCAAGAT +
Preference number: 5 (lower is better)
Translates to: FVLLREQHNSSLCKT*NSFRDPPSKVASQD
Trigger: ATCTTGACTCGCAACTTTGGAGGGTGGGTCTCTGAAGGAATTTCAGGTCTTACACAGAGATGAGTTGTGCTGCTCTCTGAGGAGAACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000559023.5
CDS-3UTR CAA 90 bp TGTCTCCTGGTGTGGTCCTTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTTCCATAAATATCAGTTaGCAATGGTTGCCTTGTGGA +
Preference number: 5 (lower is better)
Translates to: CLLVWSFRSCPTATSNSFSINIS*QWLPCG
Trigger: TCCACAAGGCAACCATTGCAAACTGATATTTATGGA...AAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAAGGACCACACCAGGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS-3UTR CAA 90 bp TGTCTCCTGGTGTGGTCCTTCCGCTCCTGTCCCACTGCCACTTCTAACTCATTTATCATGAGCTGTAGGTaGAGGAAGATGTATGAAAAG +
Preference number: 5 (lower is better)
Translates to: CLLVWSFRSCPTATSNSFIMSCR*RKMYEK
Trigger: CTTTTCATACATCTTCCTCAACCTACAGCTCATGAT...AAATGAGTTAGAAGTGGCAGTGGGACAGGAGCGGAAGGACCACACCAGGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284382.8
ENST00000679737.1
CDS GCA 90 bp CCTAAACCATCTTTCCACCTGGCGCTCCGTCAAGTTACACTTCTTTaGCAGTCCATAAATATCAGTTTGCAATGGTTGCCTTGTGGAATG +
Preference number: 5 (lower is better)
Translates to: PKPSFHLALRQVTLL*QSINISLQWLPCGM
Trigger: CATTCCACAAGGCAACCATTGCAAACTGATATTTATGGACTGGCAAAGAAGTGTAACTTGACGGAGCGCCAGGTGGAAAGATGGTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000679737.1
CDS CCA 90 bp GCTGTGCTTCTTTGGCAACCTAAAGATGTTTCTGGCTCACAGTCCTaGCCAAACTGTGAAAAATGGAGCTGTCCACCAAAAAGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: AVLLWQPKDVSGSQS*PNCEKWSCPPKSRK
Trigger: TTTCCTACTTTTTGGTGGACAGCTCCATTTTTCACAGTTTGGCCAGGACTGTGAGCCAGAAACATCTTTAGGTTGCCAAAGAAGCACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559023.5
CDS GCA 90 bp TTTTGTTTCACAACATCCCTTTCTGAAATGTCAGTCCACAAAAGGTaGCCCTTGCTTGTGAAGTGTAGTCAGAGAGCAGCTTCCAACGTT +
Preference number: 5 (lower is better)
Translates to: FCFTTSLSEMSVHKR*PLLVKCSQRAASNV
Trigger: AACGTTGGAAGCTGCTCTCTGACTACACTTCACAAGCAAGGGGCACCTTTTGTGGACTGACATTTCAGAAAGGGATGTTGTGAAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000559023.5
ENST00000679737.1
CDS TCA 90 bp ATGAGAAGGTTTTACAAAGACGAGTCCATCGTGATCCTCAAGATCTaGCCACTTTATTGTTGGAGGAAGCCAGAATCTTTCCAACCAGAA +
Preference number: 5 (lower is better)
Translates to: MRRFYKDESIVILKI*PLYCWRKPESFQPE
Trigger: TTCTGGTTGGAAAGATTCTGGCTTCCTCCAACAATAAAGTGGTCAGATCTTGAGGATCACGATGGACTCGTCTTTGTAAAACCTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000559023.5
ENST00000679737.1
CDS TCA 90 bp ATGAGCTGTAGGTTGAGGAAGATGTATGAAAAGAAAGGCTCGAGGTaGTACATAGGCAAGATCAGCGTGCAATATAAAATCCAGAAAGGA +
Preference number: 5 (lower is better)
Translates to: MSCRLRKMYEKKGSR*YIGKISVQYKIQKG
Trigger: TCCTTTCTGGATTTTATATTGCACGCTGATCTTGCCTATGTATCACCTCGAGCCTTTCTTTTCATACATCTTCCTCAACCTACAGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1
CDS GCA 72 bp TGGGCACTGTCGCCCTGGAGCGCTCCTAACGGACTTTaGAAGGCCCAGTACACGGGGGCTGCCGCGAGCGGG +
Preference number: 6 (lower is better)
Translates to: WALSPWSAPNGL*KAQYTGAAASG
Trigger: CCCGCTCGCGGCAGCCCCCGTGTACTGGGCCTTGCAAAGTCCGTTAGGAGCGCTCCAGGGCGACAGTGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394113.5
CDS GCA 72 bp TGCGCTGCACAGCTGGTACCCGGGACTGCTGAGGTTTaGACCTGGGCCTTCCGTGATTCCGAACCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: CAAQLVPGTAEV*TWAFRDSEPSA
Trigger: GGCGCTGGGTTCGGAATCACGGAAGGCCCAGGTGCAAACCTCAGCAGTCCCGGGTACCAGCTGTGCAGCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560944.1
CDS CCA 72 bp GCACAGCTGGTACCCGGGACTGCTGAGGTTTGCACCTaGGCCTTCCGTGATTCCGAACCCAGCGCCTTACAC +
Preference number: 6 (lower is better)
Translates to: AQLVPGTAEVCT*AFRDSEPSALH
Trigger: GTGTAAGGCGCTGGGTTCGGAATCACGGAAGGCCCAGGTGCAAACCTCAGCAGTCCCGGGTACCAGCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560944.1
CDS CCA 72 bp CACTCCTCACATCCTGGATGCTCTGCGCTGCACAGCTaGTACCCGGGACTGCTGAGGTTTGCACCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: HSSHPGCSALHS*YPGLLRFAPGP
Trigger: AGGCCCAGGTGCAAACCTCAGCAGTCCCGGGTACCAGCTGTGCAGCGCAGAGCATCCAGGATGTGAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560944.1
CDS CAA 90 bp GGCGAAGCTACTGGATGGCACCCTCAGGTTCTTCCTGATGGGATGTaGCTTCCTGTTTCACCACCTCCTCCTCCGTCCTGGGCCGAGGCG +
Preference number: 6 (lower is better)
Translates to: GEATGWHPQVLPDGM*LPVSPPPPPSWAEA
Trigger: CGCCTCGGCCCAGGACGGAGGAGGAGGTGGTGAAACAGGAAGCAACATCCCATCAGGAAGAACCTGAGGGTGCCATCCAGTAGCTTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284382.8
CDS GCA 72 bp GGAAGCCAGGCTGCCAACAGTACTTGCAGCATGCTGTaGCATGGGAGTCCTGTAGGCTTCCAGCTAATGGCC +
Preference number: 6 (lower is better)
Translates to: GSQAANSTCSML*HGSPVGFQLMA
Trigger: GGCCATTAGCTGGAAGCCTACAGGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000560944.1
ENST00000679737.1
CDS CCA 72 bp GTTTCACCACTTGTTAACCGCTGGGCACTGTCGCCCTaGAGCGCTCCTAACGGACTTTGCAAGGCCCAGTAC +
Preference number: 6 (lower is better)
Translates to: VSPLVNRWALSP*SAPNGLCKAQY
Trigger: GTACTGGGCCTTGCAAAGTCCGTTAGGAGCGCTCCAGGGCGACAGTGCCCAGCGGTTAACAAGTGGTGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394113.5
ENST00000558884.6
CDS CCA 72 bp CCAGGCTGCCAACAGTACTTGCAGCATGCTGTGCCATaGGAGTCCTGTAGGCTTCCAGCTAATGGCCATGCT +
Preference number: 6 (lower is better)
Translates to: PGCQQYLQHAVP*ESCRLPANGHA
Trigger: AGCATGGCCATTAGCTGGAAGCCTACAGGACTCCCATGGCACAGCATGCTGCAAGTACTGTTGGCAGCCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000560944.1
ENST00000679737.1
CDS TCA 72 bp AGTTGCGAGTCAAGATTTCTGACTGAGGGCAGTCAGTaGCGTGAGGCGAAGCTACTGGATGGCACCCTCAGG +
Preference number: 6 (lower is better)
Translates to: SCESRFLTEGSQ*REAKLLDGTLR
Trigger: CCTGAGGGTGCCATCCAGTAGCTTCGCCTCACGTCACTGACTGCCCTCAGTCAGAAATCTTGACTCGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000559023.5
CDS CAA 90 bp TCTCCAGCAAGCTTCCTGGAATTTCTTCAGCCTGGAAGGCCTCTCTaGATTCCGCCGACTCCTAAACCATCTTTCCACCTGGCGCTCCGT +
Preference number: 6 (lower is better)
Translates to: SPASFLEFLQPGRPL*IPPTPKPSFHLALR
Trigger: ACGGAGCGCCAGGTGGAAAGATGGTTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAGGCTGAAGAAATTCCAGGAAGCTTGCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000679737.1
CDS TCA 72 bp AGAGACCCACCCTCCAAAGTTGCGAGTCAAGATTTCTaGCTGAGGGCAGTCAGTGACGTGAGGCGAAGCTAC +
Preference number: 6 (lower is better)
Translates to: RDPPSKVASQDF*LRAVSDVRRSY
Trigger: GTAGCTTCGCCTCACGTCACTGACTGCCCTCAGTCAGAAATCTTGACTCGCAACTTTGGAGGGTGGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000559023.5
CDS GCA 72 bp CTGGATGGCACCCTCAGGTTCTTCCTGATGGGATGTTaGTTCCTGTTTCACCACTTGTTAACCGCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: LDGTLRFFLMGC*FLFHHLLTAGH
Trigger: GTGCCCAGCGGTTAACAAGTGGTGAAACAGGAAGCAACATCCCATCAGGAAGAACCTGAGGGTGCCATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394113.5
ENST00000558884.6
CDS CCA 72 bp AATTACAAACTTGTTAACCGCTGGGCACTGTCGCCCTaGAGCGCTCCTAACGGACTTTGCAAGGCCCAGTAC +
Preference number: 6 (lower is better)
Translates to: NYKLVNRWALSP*SAPNGLCKAQY
Trigger: GTACTGGGCCTTGCAAAGTCCGTTAGGAGCGCTCCAGGGCGACAGTGCCCAGCGGTTAACAAGTTTGTAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559639.1
CDS TCA 72 bp GCTTCCTGGAATTTCTTCAGCCTGGAAGGCCTCTCTTaGTTCCGCCGACTCCTAAACCATCTTTCCACCTGG +
Preference number: 6 (lower is better)
Translates to: ASWNFFSLEGLS*FRRLLNHLSTW
Trigger: CCAGGTGGAAAGATGGTTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAGGCTGAAGAAATTCCAGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000679737.1
CDS CAA 72 bp ACTGGATGGCACCCTCAGGTTCTTCCTGATGGGATGTaGCTTCCTGTTTCACCACTTGTTAACCGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: TGWHPQVLPDGM*LPVSPLVNRWA
Trigger: TGCCCAGCGGTTAACAAGTGGTGAAACAGGAAGCAACATCCCATCAGGAAGAACCTGAGGGTGCCATCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394113.5
ENST00000558884.6
CDS CCA 72 bp GAAACCCACGAAAGTAATTACAAACTTGTTAACCGCTaGGCACTGTCGCCCTGGAGCGCTCCTAACGGACTT +
Preference number: 6 (lower is better)
Translates to: ETHESNYKLVNR*ALSPWSAPNGL
Trigger: AAGTCCGTTAGGAGCGCTCCAGGGCGACAGTGCCCAGCGGTTAACAAGTTTGTAATTACTTTCGTGGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538112.6
ENST00000559639.1
CDS CCA 72 bp GACGTAACAAGCTGGTCCTCCACAGCTGTGCTTCTTTaGCAACCTAAAGATGTTTCTGGCTCACAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: DVTSWSSTAVLL*QPKDVSGSQSW
Trigger: CCAGGACTGTGAGCCAGAAACATCTTTAGGTTGCCAAAGAAGCACAGCTGTGGAGGACCAGCTTGTTACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559023.5
CDS CCA 72 bp TGTTGTTGGAGAGGCCAAGACAGGGACGTAACAAGCTaGTCCTCCACAGCTGTGCTTCTTTGGCAACCTAAA +
Preference number: 6 (lower is better)
Translates to: CCWRGQDRDVTS*SSTAVLLWQPK
Trigger: TTTAGGTTGCCAAAGAAGCACAGCTGTGGAGGACCAGCTTGTTACGTCCCTGTCTTGGCCTCTCCAACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559023.5
CDS CAA 72 bp AGCTTCCTGGAATTTCTTCAGCCTGGAAGGCCTCTCTaGATTCCGCCGACTCCTAAACCATCTTTCCACCTG +
Preference number: 6 (lower is better)
Translates to: SFLEFLQPGRPL*IPPTPKPSFHL
Trigger: CAGGTGGAAAGATGGTTTAGGAGTCGGCGGAATCAAGAGAGGCCTTCCAGGCTGAAGAAATTCCAGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000679737.1
CDS TCA 72 bp CTCAGAGAGCAGCACAACTCATCTCTGTGTAAGACCTaGAATTCCTTCAGAGACCCACCCTCCAAAGTTGCG +
Preference number: 6 (lower is better)
Translates to: LREQHNSSLCKT*NSFRDPPSKVA
Trigger: CGCAACTTTGGAGGGTGGGTCTCTGAAGGAATTTCAGGTCTTACACAGAGATGAGTTGTGCTGCTCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000559023.5
CDS GCA 72 bp GGAGAAACTAGAGGACAATCAGCTCACAGCAATAGATaGAGTCAGCAGAGAGAAGGTTTGGCCAGAGCAGTG +
Preference number: 6 (lower is better)
Translates to: GETRGQSAHSNR*SQQREGLARAV
Trigger: CACTGCTCTGGCCAAACCTTCTCTCTGCTGACTGCATCTATTGCTGTGAGCTGATTGTCCTCTAGTTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394113.5
ENST00000559639.1
CDS CAA 90 bp AGGTGCCTCTCAGCCCTGAGGCCGTTCTTTAAACAATCCATCTCTTaGCCTTTGGTAGCCTCTTCTTCTTCCTCTTCCTCTTCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: RCLSALRPFFKQSIS*PLVASSSSSSSSSS
Trigger: TGAAGAGGAAGAGGAAGAGGAAGAAGAAGAGGCTACCAAAGGCAAAGAGATGGATTGTTTAAAGAACGGCCTCAGGGCTGAGAGGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000560944.1
ENST00000679737.1
CDS CAA 90 bp TTCACAACATCCCTTTCTGAAATGTCAGTCCACAAAAGGTGCCCCTaGCTTGTGAAGTGTAGTCAGAGAGCAGCTTCCAACGTTCCAACC +
Preference number: 6 (lower is better)
Translates to: FTTSLSEMSVHKRCP*LVKCSQRAASNVPT
Trigger: GGTTGGAACGTTGGAAGCTGCTCTCTGACTACACTTCACAAGCAAGGGGCACCTTTTGTGGACTGACATTTCAGAAAGGGATGTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000559023.5
ENST00000679737.1
CDS CCA 72 bp CTTTGGCAACCTAAAGATGTTTCTGGCTCACAGTCCTaGCCAAACTGTGAAAAATGGAGCTGTCCACCAAAA +
Preference number: 6 (lower is better)
Translates to: LWQPKDVSGSQS*PNCEKWSCPPK
Trigger: TTTTGGTGGACAGCTCCATTTTTCACAGTTTGGCCAGGACTGTGAGCCAGAAACATCTTTAGGTTGCCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559023.5
CDS CAA 72 bp TTACAAATGCATCAGTTGCCTCATCGTTGTTGCCTTTaGGTGCACACAGTCATCTGTCAACTGCTGAACAGG +
Preference number: 6 (lower is better)
Translates to: LQMHQLPHRCCL*VHTVICQLLNR
Trigger: CCTGTTCAGCAGTTGACAGATGACTGTGTGCACCAAAAGGCAACAACGATGAGGCAACTGATGCATTTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559023.5
CDS CAA 72 bp GAAGAAGCAACAATGGTCCTAGGAATTAAGAGAGGGTaGGATTCCTTCCTGATTGTTGTTGGAGAGGCCAAG +
Preference number: 6 (lower is better)
Translates to: EEATMVLGIKRG*DSFLIVVGEAK
Trigger: CTTGGCCTCTCCAACAACAATCAGGAAGGAATCCAACCCTCTCTTAATTCCTAGGACCATTGTTGCTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559023.5
CDS CAA 90 bp CTTTTGGTGCACACAGTCATCTGTCAACTGCTGAACAGGATGATCTaGCTGTTTGTATTAAAAGGAAAGGGCTTATGCGCAGAGAGAACC +
Preference number: 6 (lower is better)
Translates to: LLVHTVICQLLNRMI*LFVLKGKGLCAERT
Trigger: GGTTCTCTCTGCGCATAAGCCCTTTCCTTTTAATACAAACAGCAAGATCATCCTGTTCAGCAGTTGACAGATGACTGTGTGCACCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559023.5
CDS CAA 90 bp GACATTGAGTTACAAATGCATCAGTTGCCTCATCGTTGTTGCCTTTaGGTGCACACAGTCATCTGTCAACTGCTGAACAGGATGATCTTG +
Preference number: 6 (lower is better)
Translates to: DIELQMHQLPHRCCL*VHTVICQLLNRMIL
Trigger: CAAGATCATCCTGTTCAGCAGTTGACAGATGACTGTGTGCACCAAAAGGCAACAACGATGAGGCAACTGATGCATTTGTAACTCAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559023.5
CDS GCA 72 bp ATTGAGTTACAAATGCATCAGTTGCCTCATCGTTGTTaGCTTTTGGTGCACACAGTCATCTGTCAACTGCTG +
Preference number: 6 (lower is better)
Translates to: IELQMHQLPHRC*LLVHTVICQLL
Trigger: CAGCAGTTGACAGATGACTGTGTGCACCAAAAGGCAACAACGATGAGGCAACTGATGCATTTGTAACTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559023.5
CDS CAA 72 bp CACACAGTCATCTGTCAACTGCTGAACAGGATGATCTaGCTGTTTGTATTAAAAGGAAAGGGCTTATGCGCA +
Preference number: 6 (lower is better)
Translates to: HTVICQLLNRMI*LFVLKGKGLCA
Trigger: TGCGCATAAGCCCTTTCCTTTTAATACAAACAGCAAGATCATCCTGTTCAGCAGTTGACAGATGACTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559023.5
CDS TCA 72 bp TTTTACAAAGACGAGTCCATCGTGATCCTCAAGATCTaGCCACTTTATTGTTGGAGGAAGCCAGAATCTTTC +
Preference number: 6 (lower is better)
Translates to: FYKDESIVILKI*PLYCWRKPESF
Trigger: GAAAGATTCTGGCTTCCTCCAACAATAAAGTGGTCAGATCTTGAGGATCACGATGGACTCGTCTTTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000558884.6
ENST00000559023.5
ENST00000679737.1
CDS TCA 72 bp AGGTTGAGGAAGATGTATGAAAAGAAAGGCTCGAGGTaGTACATAGGCAAGATCAGCGTGCAATATAAAATC +
Preference number: 6 (lower is better)
Translates to: RLRKMYEKKGSR*YIGKISVQYKI
Trigger: GATTTTATATTGCACGCTGATCTTGCCTATGTATCACCTCGAGCCTTTCTTTTCATACATCTTCCTCAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284382.8
ENST00000394113.5
ENST00000538112.6
ENST00000679737.1