RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CERCAM (Homo sapiens)

Ensembl gene IDs: ENSG00000167123

Ensembl transcript IDs: ENST00000372838.9, ENST00000372842.5, ENST00000411852.5, ENST00000420034.5, ENST00000420512.5, ENST00000447915.5, ENST00000463535.5, ENST00000483737.1, ENST00000483893.5, ENST00000487001.6, ENST00000493788.5, ENST00000612334.1, ENST00000613052.1

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGTCCAGAGGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTaGCAGGATCTGCAGTCCCTGCCAACAACCTCCTCCTCTGCTCTC +
Preference number: 1 (lower is better)
Translates to: RSRGQSGHAQGGGQV*QDLQSLPTTSSSAL
Trigger: GAGAGCAGAGGAGGAGGTTGTTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTCTGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR GCA 90 bp GTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTaGTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTG +
Preference number: 1 (lower is better)
Translates to: VLLYLPVLCTGQGGG*WGDPNIKLGEGAEV
Trigger: CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR CCA 90 bp CTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTaGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAG +
Preference number: 1 (lower is better)
Translates to: LLYLPVLCTGQGGGC*GDPNIKLGEGAEVE
Trigger: CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR CCA 90 bp GATGAAAGACAGGTCCAGAGGGCAGAGTGGCCATGCCCAAGGTGGTaGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAACAACCTCCTC +
Preference number: 1 (lower is better)
Translates to: DERQVQRAEWPCPRW*PGLTGSAVPANNLL
Trigger: GAGGAGGTTGTTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTCTGGACCTGTCTTTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR GCA 90 bp GAATCAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTaGTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTC +
Preference number: 1 (lower is better)
Translates to: ESGQAGYRGLGVLLL*CETFREWDPSLSGF
Trigger: GAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR TCA 90 bp GAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGATaGAAGACAGGTCCAGAGGGCAGAGTGGCCATGCCCAAGGTGGTG +
Preference number: 1 (lower is better)
Translates to: ETFREWDPSLSGFSR*KTGPEGRVAMPKVV
Trigger: CACCACCTTGGGCATGGCCACTCTGCCCTCTGGACCTGTCTTTCATCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR TCA 90 bp TCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTaGGTGGTTTCTCCCGATGAAAGACAGGTCCAGAGGGCAGAGTGG +
Preference number: 1 (lower is better)
Translates to: SCSFAVRPLGNGIHL*VVSPDERQVQRAEW
Trigger: CCACTCTGCCCTCTGGACCTGTCTTTCATCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR GCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGGGGCCTGGGAGTCCTaGTCCTTTGCTGTGAGACCT +
Preference number: 2 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVGAWES*SFAVRP
Trigger: AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR CCA 90 bp CAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTCCTCCTCTGCTCTCTaGGCAGTAGTGGCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: QARQGTGAWESCSFAVRPSSSAL*AVVACS
Trigger: GGAGCAGGCCACTACTGCCCAGAGAGCAGAGGAGGA...AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR GCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGTGGGCAGTAGTGGCCTaGTCCTGGACACTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVWAVVA*SWTLLC
Trigger: GCAAAGCAGTGTCCAGGAGCAGGCCACTACTGCCCA...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR GCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTGGGCAGTAGTGGCCTaGTCCTGGACACTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRWAVVA*SWTLLC
Trigger: GCAAAGCAGTGTCCAGGAGCAGGCCACTACTGCCCA...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR CCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGTCCAGAGGGCAGAGTaGCCATGCCCAAGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAVQRAE*PCPRWW
Trigger: CCACCACCTTGGGCATGGCCACTCTGCCCTCTGGAC...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR TCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAAGGTGGTGGCCAGGTCTaGCAGGATCTGCAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEGGGQV*QDLQSL
Trigger: CAGGGACTGCAGATCCTGTCAGACCTGGCCACCACC...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR TCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGGGTGGTGGCCAGGTCTaGCAGGATCTGCAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: SLGREGILGSAQLETEAGGGGQV*QDLQSL
Trigger: CAGGGACTGCAGATCCTGTCAGACCTGGCCACCACC...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR GCA 90 bp CAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTCCTGCTCCTGGACACTaGTTTGCAGTCATCACCTGG +
Preference number: 2 (lower is better)
Translates to: QARQGTGAWESCSFAVRPPAPGH*FAVITW
Trigger: CCAGGTGATGACTGCAAAGCAGTGTCCAGGAGCAGG...AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR GCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGCCTGCTCCTGGACACTaGTTTGCAGTCATCACCTGG +
Preference number: 2 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRPAPGH*FAVITW
Trigger: CCAGGTGATGACTGCAAAGCAGTGTCCAGGAGCAGG...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR GCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGGGCCTGGGAGTCCTaGTCCTTTGCTGTGAGACCT +
Preference number: 2 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAGAWES*SFAVRP
Trigger: AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR CCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGCCATGCCCAAGGTGGTaGCCAGGTCTGACAGGATCT +
Preference number: 2 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWPCPRW*PGLTGS
Trigger: AGATCCTGTCAGACCTGGCCACCACCTTGGGCATGG...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR CCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGAGGGAAGGGATCCTaGGGTCTGCCCAGCTTGAAA +
Preference number: 2 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAGGKGS*GLPSLK
Trigger: TTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCC...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR CAA 90 bp GCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTaGCACCGGCCAGGGAGGAGGGTGCTGGGGAGACCCAAACATCAA +
Preference number: 2 (lower is better)
Translates to: AGQHVCKGPALPPCT*HRPGRRVLGRPKHQ
Trigger: TTGATGTTTGGGTCTCCCCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR GCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGAGGTCTGACAGGATCTaGAGTCCCTGCCAACAACCT +
Preference number: 2 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWRSDRI*SPCQQP
Trigger: AGGTTGTTGGCAGGGACTGCAGATCCTGTCAGACCT...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR TCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGAGGGGCCCCTCAGCTaGGTCCTTAGGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFEGPLS*VLREGR
Trigger: CCTTCCCTCCCTAAGGACTCAGCTGAGGGGCCCCTC...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR CCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGGATCCATCTCTGAGTaGTTTCTCCCGATGAAAGAC +
Preference number: 2 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVGSISE*FLPMKD
Trigger: GTCTTTCATCGGGAGAAACCACTCAGAGATGGATCC...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR TCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCAGTGGTTTCTCCCGATaGAAGACAGGTCCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLSGFSR*KTGPEG
Trigger: GCCCTCTGGACCTGTCTTTCATCGGGAGAAACCACT...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR CCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGAGTCCAGAGGGCAGAGTaGCCATGCCCAAGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: LCCETFREWDPSLSGFSRVQRAE*PCPRWW
Trigger: CCACCACCTTGGGCATGGCCACTCTGCCCTCTGGAC...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR CCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGATCCATCTCTGAGTaGTTTCTCCCGATGAAAGAC +
Preference number: 2 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAGSISE*FLPMKD
Trigger: GTCTTTCATCGGGAGAAACCACTCAGAGATGGATCC...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR TCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGAATGGGATCCATCTCTaGGTGGTTTCTCCCGATGAA +
Preference number: 2 (lower is better)
Translates to: SLGREGILGSAQLETEAGNGIHL*VVSPDE
Trigger: TTCATCGGGAGAAACCACTCAGAGATGGATCCCATT...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR CCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTCCATGCCCAAGGTGGTaGCCAGGTCTGACAGGATCT +
Preference number: 2 (lower is better)
Translates to: GVLLLCCETFREWDPSLSPCPRW*PGLTGS
Trigger: AGATCCTGTCAGACCTGGCCACCACCTTGGGCATGG...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR TCA 72 bp GGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTaGCAGGATCTGCAGTCCCTGCCAACAACCTCCTCC +
Preference number: 3 (lower is better)
Translates to: GQSGHAQGGGQV*QDLQSLPTTSS
Trigger: GGAGGAGGTTGTTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR GCA 72 bp CCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTaGTTTACCTCCCTGTACTTTGCACCGGCCAGGGAG +
Preference number: 3 (lower is better)
Translates to: PTVCWATCLQGS*FTSLYFAPARE
Trigger: CTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR-3UTR CAA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTTGGGGTCTGCCCAGCTaGAAACAGAAGCTGGGGGCC +
Preference number: 3 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFWGLPS*KQKLGA
Trigger: GGCCCCCAGCTTCTGTTTCAAGCTGGGCAGACCCCA...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR TCA 72 bp AGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGATaGAAGACAGGTCCAGAGGGCAGAGTGGCCATGCCC +
Preference number: 3 (lower is better)
Translates to: REWDPSLSGFSR*KTGPEGRVAMP
Trigger: GGGCATGGCCACTCTGCCCTCTGGACCTGTCTTTCATCGGGAGAAACCACTCAGAGATGGATCCCATTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
3UTR TCA 72 bp TTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTaGGTGGTTTCTCCCGATGAAAGACAGGTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: FAVRPLGNGIHL*VVSPDERQVQR
Trigger: CCTCTGGACCTGTCTTTCATCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGCAGAGGGAGTCCCCCTaGGCTGGGCGCGTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVQRESP*AGRVLP
Trigger: CGGGAGGACGCGCCCAGCTCAGGGGGACTCCCTCTG...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGGGCTGTGCCCGCTGCTaGCAGTCAGGTCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRGCARC*QSGPGG
Trigger: CCCGCCTGGACCTGACTGGCAGCAGCGGGCACAGCC...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTGCAGCGAGCAGGGGCTaGGCGGAGAAGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: QARQGTGAWESCSFAVRPAASRG*AEKATR
Trigger: CCTGGTGGCCTTCTCCGCCCAGCCCCTGCTCGCTGC...AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp CAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTCGTCCACGGGCAGCATaGGGCGCAGAGGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: QARQGTGAWESCSFAVRPRPRAA*GAEAVR
Trigger: CCTCACAGCCTCTGCGCCGCATGCTGCCCGTGGACG...AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGGTCCAGGCGGGGGCTaGGCAGGGTCTTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVEGPGGG*AGSFGS
Trigger: GCTCCCAAAAGACCCTGCGCAGCCCCCGCCTGGACC...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGCTCGGGGTCCTCTCTaGCGGCTCGGGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAARGPL*RLGLAG
Trigger: CCCTGCCAGCCCGAGCCGCCAGAGAGGACCCCGAGC...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAAGCAGCGAGCAGGGGCTaGGCGGAGAAGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQAASRG*AEKATR
Trigger: CCTGGTGGCCTTCTCCGCCCAGCCCCTGCTCGCTGC...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGGGGACTGCCCTTGGCTaGCAGGATCCCGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRGTALG*QDPAPL
Trigger: TAGAGGGGCGGGATCCTGTCAGCCAAGGGCAGTCCC...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp GAGGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCGAGTCACATGAGCTaGGGCCTGCATGCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: EGRVAMPKVVARSDRICSPSHMS*GLHAGA
Trigger: GGCCCCCGCATGCAGGCCTCAGCTCATGTGACTCGG...ACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTGTGCGTCACCTCCTTaGGTCGGTCGCCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRCASPP*VGRQHP
Trigger: CGGGTGCTGGCGACCGACGCAAGGAGGTGACGCACA...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGAGCGTGGTCGATCCCTaGCACGTTGGGCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVESVVDP*HVGPQW
Trigger: CCACTGGGGCCCAACGTGGCAGGGATCGACCACGCT...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGGTGAGGCCAGCAGCTTaGGGGCACCCGCCAGACGCA +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWVRPAA*GHPPDA
Trigger: TGCGTCTGGCGGGTGCCCGCAAGCTGCTGGCCTCAC...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAACGTCCACGGGCAGCATaGGGCGCAGAGGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQRPRAA*GAEAVR
Trigger: CCTCACAGCCTCTGCGCCGCATGCTGCCCGTGGACG...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGGGTCCAGGCGGGGGCTaGGCAGGGTCTTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWGPGGG*AGSFGS
Trigger: GCTCCCAAAAGACCCTGCGCAGCCCCCGCCTGGACC...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGTGGGGTTGGAGGCTGTaGCCGCTGCTGCCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVEWGWRL*PLLPVR
Trigger: CCTGACTGGCAGCAGCGGGCACAGCCTCCAACCCCA...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTGGGGTTGGAGGCTGTaGCCGCTGCTGCCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRWGWRL*PLLPVR
Trigger: CCTGACTGGCAGCAGCGGGCACAGCCTCCAACCCCA...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGCCCGCACCCCACTCCTaGTTCTGGGTGCAGTTCGGC +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVPAPHS*FWVQFG
Trigger: GCCGAACTGCACCCAGAACCAGGAGTGGGGTGCGGG...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGGCCGGAGACCCAGCGTaGGGGGCGCAGAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SLGREGILGSAQLETEAGAGDPA*GAQRES
Trigger: GGACTCCCTCTGCGCCCCCCACGCTGGGTCTCCGGC...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGAGCCCACCTCGCCCTTaGTCAGAGTGCGGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRSPPRP*SECGPS
Trigger: ACTCGGGCCGCACTCTGACCAAGGGCGAGGTGGGCT...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAATCTCGGGGCTGGGGTTaGAGGCTGTGCCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQSRGWG*RLCPLL
Trigger: CAGCAGCGGGCACAGCCTCCAACCCCAGCCCCGAGA...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAAGAGGGGCCCCTCAGCTaGGTCCTTAGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQEGPLS*VLREGR
Trigger: CCTTCCCTCCCTAAGGACTCAGCTGAGGGGCCCCTC...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGAGAGCGAGGCGAGCATaGGTTCCCGACGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWRARRA*VPDGQA
Trigger: GGCCTGACCGTCGGGAACGCATGCTCGCCTCGCTCT...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp CAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTCGCCCTTGGTCAGAGTaGGGCCCGAGTAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QARQGTGAWESCSFAVRPRPWSE*GPSKGP
Trigger: AGGACCCTTACTCGGGCCGCACTCTGACCAAGGGCG...AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGCGGAAGCCTCCAGCGTaGTCGATCCCTGCCACGTTG +
Preference number: 4 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVERKPPA*SIPATL
Trigger: CAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCG...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAAAAGCAGCCCCGGCGCTaGCGGTTCTTGGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQKQPRR*RFLVGK
Trigger: CTTCCCCACCAAGAACCGCCAGCGCCGGGGCTGCTT...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTGTCCAGAGGGCAGAGTaGCCATGCCCAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QARQGTGAWESCSFAVRPVQRAE*PCPRWW
Trigger: CCACCACCTTGGGCATGGCCACTCTGCCCTCTGGAC...AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGGGAACCCCTGGGCGTTaGACCCCCGGAATCCGGATT +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWGTPGR*TPGIRI
Trigger: AATCCGGATTCCGGGGGTTCAACGCCCAGGGGTTCC...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp GAGGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTGGTGGTGGCCAGGTCTaGCAGGATCTGCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: EGRVAMPKVVARSDRICSGGGQV*QDLQSL
Trigger: CAGGGACTGCAGATCCTGTCAGACCTGGCCACCACC...ACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAAGGTGGTGGCCAGGTCTaGCAGGATCTGCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQGGGQV*QDLQSL
Trigger: CAGGGACTGCAGATCCTGTCAGACCTGGCCACCACC...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGCCGCCAGCCACTCCTaGAGCATCTCTGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVAASHS*SISVVL
Trigger: CAACACCACAGAGATGCTGCAGGAGTGGCTGGCGGC...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGACCACTGGAAGCCCCTaGCCCATGAGAAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRTTGSP*PMRSRR
Trigger: TCTGCGGCTTCTCATGGGGCAGGGGCTTCCAGTGGT...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GAGGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCGCCCTTGGTCAGAGTaGGGCCCGAGTAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: EGRVAMPKVVARSDRICSRPWSE*GPSKGP
Trigger: AGGACCCTTACTCGGGCCGCACTCTGACCAAGGGCG...ACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGGTGAGGCCAGCAGCTTaGGGGCACCCGCCAGACGCA +
Preference number: 4 (lower is better)
Translates to: SLGREGILGSAQLETEAGVRPAA*GHPPDA
Trigger: TGCGTCTGGCGGGTGCCCGCAAGCTGCTGGCCTCAC...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGTCCAGGAGCTCAGCTTaGACACCCTCCCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWSRSSA*TPSPPP
Trigger: CGGAGGTGGGGAGGGTGTCCAAGCTGAGCTCCTGGA...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGCAAGTTTTCTCTCCTTaGCCCGGGGCACCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWQVFSP*PGAPEG
Trigger: GCCCTCCGGTGCCCCGGGCCAAGGAGAGAAAACTTG...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GAGGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTAGGGGCCTGTCTAGGTaGTGTCTGGGCAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: EGRVAMPKVVARSDRICSRGLSR*CLGRER
Trigger: TCGCTCCCTGCCCAGACACCACCTAGACAGGCCCCT...ACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGGACCAGAAGGAGGGGTaGGTGTCCCGCGTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLDQKEG*VSRVGL
Trigger: CAGGCCGACGCGGGACACCCACCCCTCCTTCTGGTC...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGTGAAAAGGGCTGGCTaGGCCCAACCTACACCCAGG +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVVKRAG*AQPTPR
Trigger: CCTGGGTGTAGGTTGGGCCCAGCCAGCCCTTTTCAC...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAACTGGGCCCTGAAGGCTaGGGTGAAAAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQLGPEG*GEKGWL
Trigger: CAGCCAGCCCTTTTCACCCCAGCCTTCAGGGCCCAG...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGCGATCCCTGCCACGTTaGGCCCCAGTGGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVRSLPR*APVDFR
Trigger: TCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCG...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGCCACATTGTGGTCCGTaGCACACCTGGGGACGGGAA +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVPHCGP*HTWGRE
Trigger: TTCCCGTCCCCAGGTGTGCCACGGACCACAATGTGG...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGCATCTGGGTAGAACCTaGGCTCGCCCTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWHLGRT*ARPQAS
Trigger: GGAGGCCTGAGGGCGAGCCCAGGTTCTACCCAGATG...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTGCTGGCGGTTCTTGGTaGGGAAGTACTCGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QARQGTGAWESCSFAVRPAGGSW*GSTRLC
Trigger: GCACAGCCGAGTACTTCCCCACCAAGAACCGCCAGC...AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTAAGCAGCCCCGGCGCTaGCGGTTCTTGGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAKQPRR*RFLVGK
Trigger: CTTCCCCACCAAGAACCGCCAGCGCCGGGGCTGCTT...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGTGCTCATTGCACACGTaGACGGAGACCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVECSLHT*TETPAA
Trigger: GGCTGCTGGGGTCTCCGTCCACGTGTGCAATGAGCA...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGGCCACCAGGTCCCGTaGCCAGAAGTGTGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVGHQVP*PEVCLV
Trigger: TACAAGGCACACTTCTGGCCACGGGACCTGGTGGCC...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGTCCTCCTCTGCTCTCTaGGCAGTAGTGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVSSSAL*AVVACS
Trigger: GGAGCAGGCCACTACTGCCCAGAGAGCAGAGGAGGA...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAAAAGAGGACCCAGGGCTaGGCAGAGGCTTGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQKRTQG*AEACPQ
Trigger: TTGGGGACAAGCCTCTGCTCAGCCCTGGGTCCTCTT...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGCAGCTTCACGTCTCCTaGGTTGGGGGATCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRQLHVS*VGGSLV
Trigger: GACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTG...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAAGAGGGGCCCCTCAGCTaGGTCCTTAGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEEGPLS*VLREGR
Trigger: CCTTCCCTCCCTAAGGACTCAGCTGAGGGGCCCCTC...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGGGGGCCTGGGAGTCCTaGTCCTTTGCTGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWGAWES*SFAVRP
Trigger: AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGGGCTCATGGAACCCCTaGGCGTTGAACCCCCGGAAT +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWGSWNP*ALNPRN
Trigger: ATTCCGGGGGTTCAACGCCCAGGGGTTCCATGAGCC...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGCATTGCGGGCCAGGATaGCAAGGACCACGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLHCGPG*QGPRRA
Trigger: TGCCCGCCGTGGTCCTTGCCATCCTGGCCCGCAATG...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGCCATCTGCGAAGCTaGGGGTTAGGTGCCCACTCG +
Preference number: 4 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAGHLRS*GLGAHS
Trigger: CGAGTGGGCACCTAACCCCCAGCTTCGCAGATGGCC...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTCCCGCGTCGGCCTGTaGCCTCAGAGGTCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLSRVGL*PQRSVV
Trigger: GACGACAGACCTCTGAGGCCACAGGCCGACGCGGGA...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAAAAGGGGGACTGCCCTTaGCTGACAGGATCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEKGDCP*LTGSRP
Trigger: GGGGCGGGATCCTGTCAGCCAAGGGCAGTCCCCCTT...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGACAGACCAGGGGTTGTaGCCTTCGATCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWTDQGL*PSIPVP
Trigger: GGGCACTGGGATCGAAGGCCACAACCCCTGGTCTGT...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGTCGTCTTCCAGCCCCTaGTGGGATTTCACCGGCACA +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVSSSSP*WDFTGT
Trigger: TGTGCCGGTGAAATCCCACCAGGGGCTGGAAGACGA...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGTCTCGGGGCTGGGGTTaGAGGCTGTGCCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARSRGWG*RLCPLL
Trigger: CAGCAGCGGGCACAGCCTCCAACCCCAGCCCCGAGA...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGCCATGCCCAAGGTGGTaGCCAGGTCTGACAGGATCT +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVPCPRW*PGLTGS
Trigger: AGATCCTGTCAGACCTGGCCACCACCTTGGGCATGG...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGGGAGGGAAGGGATCCTaGGGTCTGCCCAGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRGGKGS*GLPSLK
Trigger: TTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCC...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTGGAGGGAAGGGATCCTaGGGTCTGCCCAGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: QARQGTGAWESCSFAVRPGGKGS*GLPSLK
Trigger: TTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCC...AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAAGCTCCAGCCGCCCCCTaGAGTTGCTCTCAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEAPAAP*SCSQSA
Trigger: TGCGCTTTGAGAGCAACTTCAGGGGGCGGCTGGAGC...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATATGTCTCCGTGTCACTaGGCCACTCGGCGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHMSPCH*ATRRPR
Trigger: CCGGGGACGCCGAGTGGCTCAGTGACACGGAGACAT...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGAGTGGTTTCTCCCGATaGAAGACAGGTCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRSGFSR*KTGPEG
Trigger: GCCCTCTGGACCTGTCTTTCATCGGGAGAAACCACT...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCGGCACCCCCAACCTGTaGCCGGAAGCCTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLGTPNL*PEASSV
Trigger: CACGCTGGAGGCTTCCGGGCACAGGTTGGGGGTGCC...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGAGACAGAAGAGCTGCTaGTTTCCTCCACCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRRQKSC*FPPPPG
Trigger: ACCTGGGGGTGGAGGAAAGCAGCAGCTCTTCTGTCT...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGAAAGCAAGCTGGTCTaGCCCTTCAGCCCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAESKLV*PFSPQG
Trigger: TCCCTGCGGGCTGAAGGGGCAGACCAGCTTGCTTTC...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTACTGCTCGTTGGGGTaGTGGTCGAACATGATGGGC +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRYCSLG*WSNMMG
Trigger: GCCCATCATGTTCGACCAGCACCCCAACGAGCAGTA...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGCCTGCTCCTGGACACTaGTTTGCAGTCATCACCTGG +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVPAPGH*FAVITW
Trigger: CCAGGTGATGACTGCAAAGCAGTGTCCAGGAGCAGG...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GAGGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTTGGGCAGTAGTGGCCTaGTCCTGGACACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: EGRVAMPKVVARSDRICSWAVVA*SWTLLC
Trigger: GCAAAGCAGTGTCCAGGAGCAGGCCACTACTGCCCA...ACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGAGTGCACCCTCAGAGTaGGATCCTGCTCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLSAPSE*DPAPHP
Trigger: GGGGTGGGGAGCAGGATCCCACTCTGAGGGTGCACT...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGAGCCCACCTCGCCCTTaGTCAGAGTGCGGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARSPPRP*SECGPS
Trigger: ACTCGGGCCGCACTCTGACCAAGGGCGAGGTGGGCT...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTCTGCGCAGGGTCTTTTaGGAGCCGCTCCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: QGSCFTSLYFAPAREEGALRRVF*EPLQLM
Trigger: CATCAGCTGGAGCGGCTCCCAAAAGACCCTGCGCAG...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAACAGGGAGGAGGGTGCTaGGGAGACCCAAACATCAAG +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQQGGGC*GDPNIK
Trigger: CTTGATGTTTGGGTCTCCCCAGCACCCTCCTCCCTG...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGGAAGCCCCTGCCCCATaGGAAGCCGCAGAGTCTGAT +
Preference number: 4 (lower is better)
Translates to: SLGREGILGSAQLETEAGEAPAP*EAAESD
Trigger: ATCAGACTCTGCGGCTTCTCATGGGGCAGGGGCTTC...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGCATAGGCGAAGACGATaGTGTCGTCGAAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVHRRRR*CRRKAK
Trigger: CTTGGCCTTTCGACGACATCATCGTCTTCGCCTATG...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCATGTCTCCGTGTCACTaGGCCACTCGGCGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLMSPCH*ATRRPR
Trigger: CCGGGGACGCCGAGTGGCTCAGTGACACGGAGACAT...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGACTCCTGGTTCTGGGTaGAGTTCGGCAGATGGGAAT +
Preference number: 4 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVETPGSG*SSADGN
Trigger: ATTCCCATCTGCCGAACTGCACCCAGAACCAGGAGT...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAATCTGGTCCCCTGTCCTaGTTTGTGGCCAAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVESGPLS*FVAKGA
Trigger: GGCTCCCTTGGCCACAAAGCAGGACAGGGGACCAGA...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGCTCAGAGTGGGATCCTaGTCCCCACCCCTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARLRVGS*SPPLCV
Trigger: CACGCACAGGGGTGGGGAGCAGGATCCCACTCTGAG...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTCCAGGAAGGGGGACTaGCCTTGGCTGACAGGATCC +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLSRKGD*PWLTGS
Trigger: GGATCCTGTCAGCCAAGGGCAGTCCCCCTTCCTGGA...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGGGCCTTCGATCCCAGTaGCCTGGGGGTACAGAGATG +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLGLRSQ*PGGTEM
Trigger: CATCTCTGTACCCCCAGGGCACTGGGATCGAAGGCC...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGACTAGACAGAAGAGCTaGTGCTTTCCTCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRTRQKS*CFPPPP
Trigger: TGGGGGTGGAGGAAAGCAGCAGCTCTTCTGTCTAGT...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGGCCGCCAGCCACTCCTaGAGCATCTCTGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLAASHS*SISVVL
Trigger: CAACACCACAGAGATGCTGCAGGAGTGGCTGGCGGC...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATGGAAGTACTCGGCTGTaGGGCGGTAGTAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHGSTRL*GGSSPG
Trigger: CCCAGGGCTACTACCGCCGCACAGCCGAGTACTTCC...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAACCTGCTCCTGGACACTaGTTTGCAGTCATCACCTGG +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQPAPGH*FAVITW
Trigger: CCAGGTGATGACTGCAAAGCAGTGTCCAGGAGCAGG...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGTACCTCCCTGTACTTTaGACCGGCCAGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLGREGILGSAQLETEAGYLPVL*TGQGGG
Trigger: CCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTA...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAACCCCACTCCTGGTTCTaGGTGCAGTTCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEPHSWF*VQFGRW
Trigger: CCATCTGCCGAACTGCACCCAGAACCAGGAGTGGGG...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGGAGTTGGGGGATCTCTaGTCCCCTGTCCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWELGDL*SPVLLC
Trigger: ACAAAGCAGGACAGGGGACCAGAGATCCCCCAACTC...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GAGGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTAACAGTAGGGGCTCATaGAACCCCTGGGCGTTGAAC +
Preference number: 4 (lower is better)
Translates to: EGRVAMPKVVARSDRICSNSRGS*NPWALN
Trigger: GTTCAACGCCCAGGGGTTCCATGAGCCCCTACTGTT...ACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAACCCCCAGCCCAACTGTaGTGTGTTGAAGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEPPAQL*CVEEGG
Trigger: GCCACCCTCTTCAACACACCACAGTTGGGCTGGGGG...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp CAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTACCTGGTGCATTCCCTaGTTACCTTCGTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: QARQGTGAWESCSFAVRPTWCIP*LPSLGG
Trigger: CCCACCTAACGAAGGTAACCAGGGAATGCACCAGGT...AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGGGGACCCTCTTCATCTaGGTAGAACCTGGGCTCGCC +
Preference number: 4 (lower is better)
Translates to: SLGREGILGSAQLETEAGGTLFI*VEPGLA
Trigger: GGCGAGCCCAGGTTCTACCCAGATGAAGAGGGTCCC...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGACTGGTGCCTTTCTTTaGTCCAGTGCTTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRTGAFL*SSAWDP
Trigger: AGGGTCCCAAGCACTGGACCAAAGAAAGGCACCAGT...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGACTGGTGCCTTTCTTTaGTCCAGTGCTTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVETGAFL*SSAWDP
Trigger: AGGGTCCCAAGCACTGGACCAAAGAAAGGCACCAGT...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTTCGTCTTCCAGCCCCTaGTGGGATTTCACCGGCACA +
Preference number: 4 (lower is better)
Translates to: QGSCFTSLYFAPAREEGASSSSP*WDFTGT
Trigger: TGTGCCGGTGAAATCCCACCAGGGGCTGGAAGACGA...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGGGCCACCAGGTCCCGTaGCCAGAAGTGTGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: SLGREGILGSAQLETEAGGHQVP*PEVCLV
Trigger: TACAAGGCACACTTCTGGCCACGGGACCTGGTGGCC...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGCTGCGCAGGGTCTTTTaGGAGCCGCTCCAGCTGATG +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLLRRVF*EPLQLM
Trigger: CATCAGCTGGAGCGGCTCCCAAAAGACCCTGCGCAG...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTCAGGGAGGAGGGTGCTaGGGAGACCCAAACATCAAG +
Preference number: 4 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAQGGGC*GDPNIK
Trigger: CTTGATGTTTGGGTCTCCCCAGCACCCTCCTCCCTG...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAAGTGTTGTCCACATTGTaGTCCGTGGCACACCAGAGG +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQVLSTL*SVAHQR
Trigger: CCTCTGGTGTGCCACGGACCACAATGTGGACAACAC...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372838.9
CDS-3UTR TCA 90 bp CAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTATTTGAGGGAAGACTaGCACCCTCAAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QARQGTGAWESCSFAVRPYLRED*HPQSPA
Trigger: AGCTGGGCTTTGAGGGTGTCAGTCTTCCCTCAAATA...AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGCCGACTCTTCGACCTaGGCCGCAGACCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSADSST*AADPEG
Trigger: CCCCTCTGGGTCTGCGGCTCAGGTCGAAGAGTCGGC...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTCCCGGAGCCCAGTGCTaGTGGCACCCCCAACCTGTG +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSPGAQC*WHPQPV
Trigger: CACAGGTTGGGGGTGCCATCAGCACTGGGCTCCGGG...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATGCGAGTGTTCGGCATTaGGGGCCAGGATGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHASVRH*GPGWQG
Trigger: TCCTTGCCATCCTGGCCCGCAATGCCGAACACTCGC...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGCACAGTTCTGTGACCTaGTGTGTGACCTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWHSSVT*CVTSGK
Trigger: CTTGCCTGAGGTCACACAGCAGGTCACAGAACTGTG...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGCCGTGGCCAGAAGTGTaGCTTGTACTGCTCGTTGGG +
Preference number: 4 (lower is better)
Translates to: SLGREGILGSAQLETEAGPWPEV*LVLLVG
Trigger: CCCAACGAGCAGTACAAGGCACACTTCTGGCCACGG...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGAGGCTGTGCCCGCTGCTaGCAGTCAGGTCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRGCARC*QSGPGG
Trigger: CCCGCCTGGACCTGACTGGCAGCAGCGGGCACAGCC...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAATCCACCAGGATCGGGTaGCAGCTTCCATTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVESTRIG*QLPFEA
Trigger: GGCCTCAAATGGAAGCTGCCACCCGATCCTGGTGGA...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAATGTCTAGGTGGTGTCTaGGCAGGGAGCGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVECLGGV*AGSEQT
Trigger: TGTCTGCTCGCTCCCTGCCCAGACACCACCTAGACA...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGTGGGGTGAAAAGGGCTaGCTGGGCCCAACCTACACC +
Preference number: 4 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARWGEKG*LGPTYT
Trigger: GGTGTAGGTTGGGCCCAGCCAGCCCTTTTCACCCCA...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAACACGTTGGGCCCCAGTaGACTTCAGAGGTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEHVGPQ*TSEVPV
Trigger: GACAGGAACCTCTGAAGTCCACTGGGGCCCAACGTG...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGCCTGCAGCATCTCTGTaGTGTTGTCCACATTGTGGT +
Preference number: 4 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVEPAASL*CCPHCG
Trigger: ACCACAATGTGGACAACACCACAGAGATGCTGCAGG...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATGGGACCCTCTTCATCTaGGTAGAACCTGGGCTCGCC +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHGTLFI*VEPGLA
Trigger: GGCGAGCCCAGGTTCTACCCAGATGAAGAGGGTCCC...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGTCCCACACCAGAAGTTaGAGTAGTAGGTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVSHTRS*SSRSGS
Trigger: ACTCCCAGACCTACTACTCCAACTTCTGGTGTGGGA...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATGCTGGCGGTTCTTGGTaGGGAAGTACTCGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHAGGSW*GSTRLC
Trigger: GCACAGCCGAGTACTTCCCCACCAAGAACCGCCAGC...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCGGCGCTGGCGGTTCTTaGTGGGGAAGTACTCGGCTG +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLGAGGS*WGSTRL
Trigger: CAGCCGAGTACTTCCCCACCAAGAACCGCCAGCGCC...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGAGTGTAGTTGGGATGTaGCGGGTAGAAAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVESVVGM*RVESKL
Trigger: CAGCTTGCTTTCTACCCGCCACATCCCAACTACACT...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGGCTGTCATCATCCCATaGAGAGGATGTCTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWAVIIP*RGCLRV
Trigger: GACACGGAGACATCCTCTCCATGGGATGATGACAGC...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGACCCAAACATCAAGCTaGGGGAGGGTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLTQTSS*GRVLRW
Trigger: CCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGT...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAAACCCAAACATCAAGCTaGGGGAGGGTGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVETQTSS*GRVLRW
Trigger: CCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGT...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATGCCCCTGTCCCTCTCTaGATGGGGACTAGACAGAAG +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHAPVPL*MGTRQK
Trigger: CTTCTGTCTAGTCCCCATTCAGAGAGGGACAGGGGC...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGACCGAGTCACATGAGCTaGGGCCTGCATGCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRPSHMS*GLHAGA
Trigger: GGCCCCCGCATGCAGGCCTCAGCTCATGTGACTCGG...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGAATGGGATCCATCTCTaGGTGGTTTCTCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRNGIHL*VVSPDE
Trigger: TTCATCGGGAGAAACCACTCAGAGATGGATCCCATT...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTCGCCAGCACCCGCATTaGTTCGGCCCTAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSRQHPH*FGPSAG
Trigger: CCCTGCACTAGGGCCGAAGCAATGCGGGTGCTGGCG...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGTCAGAGGTTCCTGTCTaGTCCTCTTCAAATCCAGCC +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWSEVPV*SSSNPA
Trigger: GGCTGGATTTGAAGAGGAGCAGACAGGAACCTCTGA...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGCTTTCTTTGGTCCAGTaGTTGGGACCCTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRLSLVQ*LGPSSS
Trigger: AGATGAAGAGGGTCCCAAGCACTGGACCAAAGAAAG...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCGAAAGCAAGCTGGTCTaGCCCTTCAGCCCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLESKLV*PFSPQG
Trigger: TCCCTGCGGGCTGAAGGGGCAGACCAGCTTGCTTTC...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAACATAACGGTGCTCATTaGACACGTGGACGGAGACCC +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEHNGAH*TRGRRP
Trigger: GGGTCTCCGTCCACGTGTGCAATGAGCACCGTTATG...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTAGAGCGAGGCGAGCATaGGTTCCCGACGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSRARRA*VPDGQA
Trigger: GGCCTGACCGTCGGGAACGCATGCTCGCCTCGCTCT...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTGCTCGTTGGGGTaGTGGTCGAACATGATGGGC +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLYCSLG*WSNMMG
Trigger: GCCCATCATGTTCGACCAGCACCCCAACGAGCAGTA...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCCGTGGCCAGAAGTGTaGCTTGTACTGCTCGTTGGG +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHPWPEV*LVLLVG
Trigger: CCCAACGAGCAGTACAAGGCACACTTCTGGCCACGG...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTGTCTGCAAGGGTCCTaGTTTACCTCCCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRCLQGS*FTSLYF
Trigger: AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACA...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTTACCTATGTGACCTGTaGCTGTGTGACCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAYLCDL*LCDHRP
Trigger: TGGCCTGTGGTCACACAGCCACAGGTCACATAGGTA...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATGTGTTGTCCACATTGTaGTCCGTGGCACACCTGGGG +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHVLSTL*SVAHLG
Trigger: CCCCAGGTGTGCCACGGACCACAATGTGGACAACAC...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTAGCTCATCTCGGGGCTaGGGTTGGAGGCTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSSSSRG*GWRLCP
Trigger: CGGGCACAGCCTCCAACCCCAGCCCCGAGATGAGCT...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCCCACATTGTGGTCCGTaGCACACCAGAGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLPHCGP*HTRGPS
Trigger: GGATGGCCCTCTGGTGTGCCACGGACCACAATGTGG...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372838.9
CDS-3UTR TCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGCTCCAGCCGCCCCCTaGAGTTGCTCTCAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSAPAAP*SCSQSA
Trigger: TGCGCTTTGAGAGCAACTTCAGGGGGCGGCTGGAGC...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTTGCAGGGGCAGCACGTaGGCACTGAACCCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSCRGST*ALNPGV
Trigger: GACTCCAGGGTTCAGTGCGCACGTGCTGCCCCTGCA...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGGAAGTACTCGGCTGTaGGGCGGTAGTAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFGSTRL*GGSSPG
Trigger: CCCAGGGCTACTACCGCCGCACAGCCGAGTACTTCC...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTCCAAGACAGTTTCTCTaGCTCCACATCCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAPRQFL*LHILHQ
Trigger: CTGATGGAGGATGTGGAGGCAGAGAAACTGTCTTGG...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGGGCAGTAGTGGCCTaGTCCTGGACACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLWAVVA*SWTLLC
Trigger: GCAAAGCAGTGTCCAGGAGCAGGCCACTACTGCCCA...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGTGTCTGCAAGGGTCCTaGTTTACCTCCCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWCLQGS*FTSLYF
Trigger: AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACA...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGGCTGGGCAACATGTCTaGAAGGGTCCTGCTTTACCT +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLAGQHV*KGPALP
Trigger: AGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGC...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGACATTGCGGGCCAGGATaGCAAGGACCACGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRHCGPG*QGPRRA
Trigger: TGCCCGCCGTGGTCCTTGCCATCCTGGCCCGCAATG...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTATCTACCAAGAGAGCTaGCCCCAGCACGGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSIYQES*PQHGGG
Trigger: ACCGCCCCCGTGCTGGGGCCAGCTCTCTTGGTAGAT...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGACTCCTCCCTGTTCTaGTGTCTACAGACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARDSSLF*CLQTRG
Trigger: ACCCCTGGTCTGTAGACACCAGAACAGGGAGGAGTC...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTCATCTGGGTAGAACCTaGGCTCGCCCTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFHLGRT*ARPQAS
Trigger: GGAGGCCTGAGGGCGAGCCCAGGTTCTACCCAGATG...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAAAGCTCCATCAGAAACTaGTGCCTTTCTTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VAMPKVVARSDRICSPCQSSIRN*CLSLVQ
Trigger: CTGGACCAAAGAAAGGCACCAGTTTCTGATGGAGCT...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GAGGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTAGCTCCATCAGAAACTaGTGCCTTTCTTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: EGRVAMPKVVARSDRICSSSIRN*CLSLVQ
Trigger: CTGGACCAAAGAAAGGCACCAGTTTCTGATGGAGCT...ACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGGCGCTGGCGGTTCTTaGTGGGGAAGTACTCGGCTG +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFGAGGS*WGSTRL
Trigger: CAGCCGAGTACTTCCCCACCAAGAACCGCCAGCGCC...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGCTCGTTGGGGTGCTaGTCGAACATGATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLCSLGC*SNMMGR
Trigger: CCTGCCCATCATGTTCGACCAGCACCCCAACGAGCA...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGAAGCTCATCTCGGGGCTaGGGTTGGAGGCTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRSSSRG*GWRLCP
Trigger: CGGGCACAGCCTCCAACCCCAGCCCCGAGATGAGCT...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCCCATGCCCAAGGTGGTaGCCAGGTCTGACAGGATCT +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLPCPRW*PGLTGS
Trigger: AGATCCTGTCAGACCTGGCCACCACCTTGGGCATGG...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGTCCAGAGGGCAGAGTaGCCATGCCCAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFVQRAE*PCPRWW
Trigger: CCACCACCTTGGGCATGGCCACTCTGCCCTCTGGAC...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGAAGCCCCTGCCCCATaGGAAGCCGCAGAGTCTGAT +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSEAPAP*EAAESD
Trigger: ATCAGACTCTGCGGCTTCTCATGGGGCAGGGGCTTC...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCATAGGCGAAGACGATaGTGTCGTCGAAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHHRRRR*CRRKAK
Trigger: CTTGGCCTTTCGACGACATCATCGTCTTCGCCTATG...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGACCCACTCGGTGCCAATaGCCGGGTCTCTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRPTRCQ*PGLSPE
Trigger: CTCTGGTGAGAGACCCGGGCATTGGCACCGAGTGGG...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGAAGGATCACACCTGGTaGATTCCCTGGTTACCTTCG +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLKDHTW*IPWLPS
Trigger: CGAAGGTAACCAGGGAATGCACCAGGTGTGATCCTT...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTACCACTGGAAGCCCCTaGCCCATGAGAAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSTTGSP*PMRSRR
Trigger: TCTGCGGCTTCTCATGGGGCAGGGGCTTCCAGTGGT...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGGGAGTCCTGCTCCTTTaGTGTGAGACCTTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: SLGREGILGSAQLETEAGGVLLL*CETFRE
Trigger: TTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAAGGAGTCCTGCTCCTTTaGTGTGAGACCTTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEGVLLL*CETFRE
Trigger: TTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAACTGTCCCTCTCTGAATaGGGACTAGACAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVELSLSE*GLDRRA
Trigger: AGCTCTTCTGTCTAGTCCCCATTCAGAGAGGGACAG...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTTTGGTCCAGTGCTTaGGACCCTCTTCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHLWSSA*DPLHLG
Trigger: ACCCAGATGAAGAGGGTCCCAAGCACTGGACCAAAG...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAAAAGGCCAAGTGTAGTTaGGATGTGGCGGGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEKAKCS*DVAGRK
Trigger: CTTTCTACCCGCCACATCCCAACTACACTTGGCCTT...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTTGCTCATTGCACACGTaGACGGAGACCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSCSLHT*TETPAA
Trigger: GGCTGCTGGGGTCTCCGTCCACGTGTGCAATGAGCA...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTTCCTCCTCTGCTCTCTaGGCAGTAGTGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSSSSAL*AVVACS
Trigger: GGAGCAGGCCACTACTGCCCAGAGAGCAGAGGAGGA...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAACTCATCTTTCCTATTTaGGGGAAGACTGACACCCTC +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVELIFPI*GKTDTL
Trigger: GAGGGTGTCAGTCTTCCCTCAAATAGGAAAGATGAG...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTACCCCAAGGCAGCCTTaGCCCCAAAGCACTAACACC +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFTPRQP*PQSTNT
Trigger: GGTGTTAGTGCTTTGGGGTCAAGGCTGCCTTGGGGT...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGAGAAGCCGCAGAGTCTaGTTGTTGGTCAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: SLGREGILGSAQLETEAGRSRRV*LLVRML
Trigger: CAACATTCTGACCAACAATCAGACTCTGCGGCTTCT...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATACCCCTGTGCGTGGATaGTCAAGTTTTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHTPVRG*SSFLSL
Trigger: CAAGGAGAGAAAACTTGAGCATCCACGCACAGGGGT...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGAGCGAGTGTTCGGCATTaGGGGCCAGGATGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRASVRH*GPGWQG
Trigger: TCCTTGCCATCCTGGCCCGCAATGCCGAACACTCGC...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGAAAGCTGGGGGTTAGGTaGCCACTCGGTGCCAATGCC +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRKLGVR*PLGANA
Trigger: GGCATTGGCACCGAGTGGGCACCTAACCCCCAGCTT...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGACTGGGGGTACAGAGATaGCAGAGGGGAGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRLGVQR*QRGEAP
Trigger: TGGAGCCTCTCCCCTCTGGCATCTCTGTACCCCCAG...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGCTTTCTTTGGTCCAGTaGTTGGGACCCTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLLSLVQ*LGPSSS
Trigger: AGATGAAGAGGGTCCCAAGCACTGGACCAAAGAAAG...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGAGGGGCCTGGGAGTCCTaGTCCTTTGCTGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRGAWES*SFAVRP
Trigger: AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTTCACGTCTCCTGAGTTaGGGGATCTCTGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFSRLLS*GISGPL
Trigger: CAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGA...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGAGTGTAGTTGGGATGTaGCGGGTAGAAAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARSVVGM*RVESKL
Trigger: CAGCTTGCTTTCTACCCGCCACATCCCAACTACACT...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGGCTTCTAAGATCAGGTaGATGAAGTTGACCCTCTCG +
Preference number: 4 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLASKIR*MKLTLS
Trigger: CGAGAGGGTCAACTTCATCCACCTGATCTTAGAAGC...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTTGCTCGTTGGGGTGCTaGTCGAACATGATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFCSLGC*SNMMGR
Trigger: CCTGCCCATCATGTTCGACCAGCACCCCAACGAGCA...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGGGATCCATCTCTGAGTaGTTTCTCCCGATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SLGREGILGSAQLETEAGGSISE*FLPMKD
Trigger: GTCTTTCATCGGGAGAAACCACTCAGAGATGGATCC...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAACCAATTCCCCAGAAATaGAGACTACGTGTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEPIPQK*RLRVKS
Trigger: AGACTTGACACGTAGTCTTCATTTCTGGGGAATTGG...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTTGCCCAGGTTTTGGGTaGTGCTGCCCCTTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFCPGFG*CCPFKP
Trigger: TGGCTTAAAGGGGCAGCATCACCCAAAACCTGGGCA...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTAGTTCCTGGCAAAGGTaGGGGCTTCCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFSSWQR*GLPASA
Trigger: AGCTGAAGCAGGAAGCCCTCACCTTTGCCAGGAACT...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTAGTTCCTGGCAAAGGTaGGGGCTTCCTGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSSSWQR*GLPASA
Trigger: AGCTGAAGCAGGAAGCCCTCACCTTTGCCAGGAACT...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATAGAAGCCGCAGAGTCTaGTTGTTGGTCAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHRSRRV*LLVRML
Trigger: CAACATTCTGACCAACAATCAGACTCTGCGGCTTCT...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGCACCTGGCCAACGAATaGATTTTGAAAGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWHLANE*ILKDEK
Trigger: CTTTTCATCTTTCAAAATGCATTCGTTGGCCAGGTG...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR GCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTCATAACGGTGCTCATTaGACACGTGGACGGAGACCC +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFHNGAH*TRGRRP
Trigger: GGGTCTCCGTCCACGTGTGCAATGAGCACCGTTATG...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCCCAAGACAGTTTCTCTaGCTCCACATCCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLPRQFL*LHILHQ
Trigger: CTGATGGAGGATGTGGAGGCAGAGAAACTGTCTTGG...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGTGCAGTTCGGCAGATaGGAATCCAGGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSVQFGR*ESRSSA
Trigger: AGCTGAGCTCCTGGATTCCCATCTGCCGAACTGCAC...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAACAAGTCTTACAGGGGTaGGAACTAACAAACTCCCAA +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEQVLQG*ELTNSQ
Trigger: TTGGGAGTTTGTTAGTTCCCACCCCTGTAAGACTTG...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGGTTACCTTCGTTAGGTaGGCAGATACCTACCTATGT +
Preference number: 4 (lower is better)
Translates to: SLGREGILGSAQLETEAGVTFVR*ADTYLC
Trigger: ACATAGGTAGGTATCTGCCCACCTAACGAAGGTAAC...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCAAGGCCAAGTGTAGTTaGGATGTGGCGGGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLKAKCS*DVAGRK
Trigger: CTTTCTACCCGCCACATCCCAACTACACTTGGCCTT...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTTCTTCCAGCCCCTGGTaGGATTTCACCGGCACATTC +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFSSSPW*DFTGTF
Trigger: GAATGTGCCGGTGAAATCCCACCAGGGGCTGGAAGA...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGCTTCTAAGATCAGGTaGATGAAGTTGACCCTCTCG +
Preference number: 4 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARASKIR*MKLTLS
Trigger: CGAGAGGGTCAACTTCATCCACCTGATCTTAGAAGC...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTCTCTCCTTGGAACAGTaGAGGGTAGGTGTGCTACAG +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSLSLEQ*RVGVLQ
Trigger: CTGTAGCACACCTACCCTTCACTGTTCCAAGGAGAG...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR TCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGAAGTGGTTTCTCCCGATaGAAGACAGGTCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRSGFSR*KTGPEG
Trigger: GCCCTCTGGACCTGTCTTTCATCGGGAGAAACCACT...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTCCATCAGAAACTGGTaGCTTTCTTTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLSIRNW*LSLVQC
Trigger: GCACTGGACCAAAGAAAGGCACCAGTTTCTGATGGA...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAAAATGTTGTCTGTGTCTaGAAACAGGATATAGTCGGC +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVENVVCV*KQDIVG
Trigger: GCCGACTATATCCTGTTTGCAGACACAGACAACATT...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTAGGTCTGACAGGATCTaGAGTCCCTGCCAACAACCT +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFRSDRI*SPCQQP
Trigger: AGGTTGTTGGCAGGGACTGCAGATCCTGTCAGACCT...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTCTTTGGTCCAGTGCTTaGGACCCTCTTCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFLWSSA*DPLHLG
Trigger: ACCCAGATGAAGAGGGTCCCAAGCACTGGACCAAAG...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGATCTTCCAGCCCCTGGTaGGATTTCACCGGCACATTC +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRSSSPW*DFTGTF
Trigger: GAATGTGCCGGTGAAATCCCACCAGGGGCTGGAAGA...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCTGTCATCATCCCATaGAGAGGATGTCTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFAVIIP*RGCLRV
Trigger: GACACGGAGACATCCTCTCCATGGGATGATGACAGC...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCGGATCCATCTCTGAGTaGTTTCTCCCGATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLGSISE*FLPMKD
Trigger: GTCTTTCATCGGGAGAAACCACTCAGAGATGGATCC...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTTCCTGGACACTGCTTTaGAGTCATCACCTGGACCTA +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFSWTLL*SHHLDL
Trigger: TAGGTCCAGGTGATGACTGCAAAGCAGTGTCCAGGA...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTTCCTGGACACTGCTTTaGAGTCATCACCTGGACCTA +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSSWTLL*SHHLDL
Trigger: TAGGTCCAGGTGATGACTGCAAAGCAGTGTCCAGGA...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTTTAAGGATCACACCTaGTGCATTCCCTGGTTACCT +
Preference number: 4 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLFKDHT*CIPWLP
Trigger: AGGTAACCAGGGAATGCACCAGGTGTGATCCTTAAA...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTCAGGCTGTAGTGCAGTaGTATGATCTCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFQAVVQ*YDLDSL
Trigger: CAGTGAGTCGAGATCATACCACTGCACTACAGCCTG...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTCCTGCAGCATCTCTGTaGTGTTGTCCACATTGTGGT +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFPAASL*CCPHCG
Trigger: ACCACAATGTGGACAACACCACAGAGATGCTGCAGG...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTTCCATCAGAAACTGGTaGCTTTCTTTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFSIRNW*LSLVQC
Trigger: GCACTGGACCAAAGAAAGGCACCAGTTTCTGATGGA...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CCA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAAGTCCTGCTTATGTCATaGACAAAGATAAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVEVLLMS*TKIREE
Trigger: TTCTTCTCTTATCTTTGTCCATGACATAAGCAGGAC...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGATCCCACACCAGAAGTTaGAGTAGTAGGTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRSHTRS*SSRSGS
Trigger: ACTCCCAGACCTACTACTCCAACTTCTGGTGTGGGA...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR TCA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGAAATGGGATCCATCTCTaGGTGGTTTCTCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: LCCETFREWDPSLSGFSRNGIHL*VVSPDE
Trigger: TTCATCGGGAGAAACCACTCAGAGATGGATCCCATT...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR GCA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTAATGTTGTCTGTGTCTaGAAACAGGATATAGTCGGC +
Preference number: 4 (lower is better)
Translates to: GVLLLCCETFREWDPSLSNVVCV*KQDIVG
Trigger: GCCGACTATATCCTGTTTGCAGACACAGACAACATT...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS CCA 90 bp CCTCAGAGGTCTGTCGTCTCCCAGCAGGGGGCTCGGGGTCCTCTCTaGCGGCTCGGGCTGGCAGGGCCGTCAGAGGGCCATCCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: PQRSVVSQQGARGPL*RLGLAGPSEGHPGP
Trigger: CGGGCCAGGATGGCCCTCTGACGGCCCTGCCAGCCCGAGCCGCCAGAGAGGACCCCGAGCCCCCTGCTGGGAGACGACAGACCTCTGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411852.5
ENST00000493788.5
CDS GCA 90 bp GCCGCTCCAGAGCGCCCAGGTAGTGGGGCAGCGAGTGTTCGGCATTaGGGGCCAGGATGGCAAGGACCACGGCGGGCAGCGGCGACTCCG +
Preference number: 5 (lower is better)
Translates to: AAPERPGSGAASVRH*GPGWQGPRRAAATP
Trigger: CGGAGTCGCCGCTGCCCGCCGTGGTCCTTGCCATCCTGGCCCGCAATGCCGAACACTCGCTGCCCCACTACCTGGGCGCTCTGGAGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000411852.5
ENST00000493788.5
CDS CCA 90 bp CGCCCAGGTAGTGGGGCAGCGAGTGTTCGGCATTGCGGGCCAGGATaGCAAGGACCACGGCGGGCAGCGGCGACTCCGCAACGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: RPGSGAASVRHCGPG*QGPRRAAATPQRPQ
Trigger: CTGCGGGCGTTGCGGAGTCGCCGCTGCCCGCCGTGGTCCTTGCCATCCTGGCCCGCAATGCCGAACACTCGCTGCCCCACTACCTGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000411852.5
ENST00000493788.5
CDS GCA 90 bp CCCCTGCACAGCCCGGAGCCCAGTGCTGATGGCACCCCCAACCTGTaGCCGGAAGCCTCCAGCGTGGTCGATCCCTGCCACGTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: PLHSPEPSADGTPNL*PEASSVVDPCHVGP
Trigger: GGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTTGGGGGTGCCATCAGCACTGGGCTCCGGGCTGTGCAGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS GCA 90 bp CGTCCACGGGCAGCATGCGGCGCAGAGGCTGTGAGGCCAGCAGCTTaGGGGCACCCGCCAGACGCAGGGCATAGGCCAGCGTCCAGTAGG +
Preference number: 5 (lower is better)
Translates to: RPRAACGAEAVRPAA*GHPPDAGHRPASSR
Trigger: CCTACTGGACGCTGGCCTATGCCCTGCGTCTGGCGGGTGCCCGCAAGCTGCTGGCCTCACAGCCTCTGCGCCGCATGCTGCCCGTGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000463535.5
ENST00000612334.1
ENST00000613052.1
CDS GCA 90 bp AGCTGGGCGCGTCCTCCCGCGGCGGTCCGCTCCTTAAGTCCCCTGTaGGTCACCTCCTTGCGTCGGTCGCCAGCACCCGCATTGCTTCGG +
Preference number: 5 (lower is better)
Translates to: SWARPPAAVRSLSPL*VTSLRRSPAPALLR
Trigger: CCGAAGCAATGCGGGTGCTGGCGACCGACGCAAGGAGGTGACGCACAGGGGACTTAAGGAGCGGACCGCCGCGGGAGGACGCGCCCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 90 bp CCGCTGCTGCCAGTCAGGTCCAGGCGGGGGCTGCGCAGGGTCTTTTaGGAGCCGCTCCAGCTGATGAGGCGGCCGCTGTCATCATCCCAT +
Preference number: 5 (lower is better)
Translates to: PLLPVRSRRGLRRVF*EPLQLMRRPLSSSH
Trigger: ATGGGATGATGACAGCGGCCGCCTCATCAGCTGGAGCGGCTCCCAAAAGACCCTGCGCAGCCCCCGCCTGGACCTGACTGGCAGCAGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000612334.1
ENST00000613052.1
CDS GCA 90 bp GGCACCCCCAACCTGTGCCCGGAAGCCTCCAGCGTGGTCGATCCCTaGCACGTTGGGCCCCAGTGGACTTCAGAGGTTCCTGTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GTPNLCPEASSVVDP*HVGPQWTSEVPVCS
Trigger: GGAGCAGACAGGAACCTCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTTGGGGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS GCA 90 bp AGCACCGCCGGGGTCCTTAGGACCCTGCTGGGAGGGAAAGAACTCTaGAGCCTCTCGGGAGAGGAGCAGAAAAGGGAGCGGCCTGGCGGC +
Preference number: 5 (lower is better)
Translates to: STAGVLRTLLGGKEL*SLSGEEQKRERPGG
Trigger: GCCGCCAGGCCGCTCCCTTTTCTGCTCCTCTCCCGAGAGGCTGCAGAGTTCTTTCCCTCCCAGCAGGGTCCTAAGGACCCCGGCGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420512.5
CDS-3UTR CAA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGGAAGGGGGACTGCCCTaGGCTGACAGGATCCCGCCC +
Preference number: 5 (lower is better)
Translates to: EGAGETQTSSWGRVLRWREGGLP*ADRIPP
Trigger: GGGCGGGATCCTGTCAGCCAAGGGCAGTCCCCCTTC...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAACAGCCCACCTCGCCCTaGGTCAGAGTGCGGCCCGAG +
Preference number: 5 (lower is better)
Translates to: VAMPKVVARSDRICSPCQQPTSP*VRVRPE
Trigger: CTCGGGCCGCACTCTGACCAAGGGCGAGGTGGGCTG...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGCAGCCCACCTCGCCCTaGGTCAGAGTGCGGCCCGAG +
Preference number: 5 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWQPTSP*VRVRPE
Trigger: CTCGGGCCGCACTCTGACCAAGGGCGAGGTGGGCTG...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGTGTGAGGCCAGCAGCTaGCGGGCACCCGCCAGACGC +
Preference number: 5 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWCEASS*RAPARR
Trigger: GCGTCTGGCGGGTGCCCGCAAGCTGCTGGCCTCACA...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS GCA 90 bp TCCGTGGCACACCTGTGCCCGGAAGCCTCCAGCGTGGTCGATCCCTaGCACGTTGGGCCCCAGTGGACTTCAGAGGTTCCTGTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SVAHLCPEASSVVDP*HVGPQWTSEVPVCS
Trigger: GGAGCAGACAGGAACCTCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTGTGCCACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411852.5
CDS CCA 90 bp CCAGTGCTGATGGCACCCCCAACCTGTGCCCGGAAGCCTCCAGCGTaGTCGATCCCTGCCACGTTGGGCCCCAGTGGACTTCAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: PVLMAPPTCARKPPA*SIPATLGPSGLQRF
Trigger: GAACCTCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTTGGGGGTGCCATCAGCACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 90 bp TTGGGAGCCGCTCCAGCTGATGAGGCGGCCGCTGTCATCATCCCATaGAGAGGATGTCTCCGTGTCACTGAGCCACTCGGCGTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: LGAAPADEAAAVIIP*RGCLRVTEPLGVPG
Trigger: GCCGGGGACGCCGAGTGGCTCAGTGACACGGAGACATCCTCTCCATGGGATGATGACAGCGGCCGCCTCATCAGCTGGAGCGGCTCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000612334.1
ENST00000613052.1
CDS CCA 90 bp AGGGGCAGCGAGCAGGGGCTGGGCGGAGAAGGCCACCAGGTCCCGTaGCCAGAAGTGTGCCTTGTACTGCTCGCTCTTCCCAGATGGAGT +
Preference number: 5 (lower is better)
Translates to: RGSEQGLGGEGHQVP*PEVCLVLLALPRWS
Trigger: ACTCCATCTGGGAAGAGCGAGCAGTACAAGGCACACTTCTGGCCACGGGACCTGGTGGCCTTCTCCGCCCAGCCCCTGCTCGCTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487001.6
CDS CCA 90 bp TGTCCTGCTTTGTGGCCAAGGGAGCCCAGGATCCTGGCCAGAGGATaGGCCCGCACCCCACTCCTGGTTCTGGGTGCAGTTCGGCAGATG +
Preference number: 5 (lower is better)
Translates to: CPALWPREPRILARG*ARTPLLVLGAVRQM
Trigger: CATCTGCCGAACTGCACCCAGAACCAGGAGTGGGGTGCGGGCCCATCCTCTGGCCAGGATCCTGGGCTCCCTTGGCCACAAAGCAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372842.5
ENST00000420034.5
CDS CCA 90 bp AGCGGCCCAGCTGCCAGCTTCACGTCTCCTGAGTTGGGGGATCTCTaGTCCCCTGTCCTGCTTTGTGGCCAAGGGAGCCCAGGATCCTGG +
Preference number: 5 (lower is better)
Translates to: SGPAASFTSPELGDL*SPVLLCGQGSPGSW
Trigger: CCAGGATCCTGGGCTCCCTTGGCCACAAAGCAGGACAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTGGCAGCTGGGCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGTGGAACCCCTGGGCGTaGAACCCCCGGAATCCGGAT +
Preference number: 5 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVWNPWA*NPRNPD
Trigger: ATCCGGATTCCGGGGGTTCAACGCCCAGGGGTTCCA...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTCGATCCCTGCCACGTaGGGCCCCAGTGGACTTCAG +
Preference number: 5 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRSIPAT*GPSGLQ
Trigger: CTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGA...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS GCA 90 bp CCAGCTTCACGTCTCCTGAGTTGGGGGATCTCTGGTCCCCTGTCCTaGTTTGTGGCCAAGGGAGCCCAGGATCCTGGCCAGAGGATGGGC +
Preference number: 5 (lower is better)
Translates to: PASRLLSWGISGPLS*FVAKGAQDPGQRMG
Trigger: GCCCATCCTCTGGCCAGGATCCTGGGCTCCCTTGGCCACAAAGCAGGACAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372842.5
ENST00000420034.5
CDS CCA 90 bp GGCACACCAGCTGCCAGCTTCACGTCTCCTGAGTTGGGGGATCTCTaGTCCCCTGTCCTGCTTTGTGGCCAAGGGAGCCCAGGATCCTGG +
Preference number: 5 (lower is better)
Translates to: GTPAASFTSPELGDL*SPVLLCGQGSPGSW
Trigger: CCAGGATCCTGGGCTCCCTTGGCCACAAAGCAGGACAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTGGCAGCTGGTGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420034.5
CDS-3UTR CAA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGTCTGGGAGTCCAGCATaGGGGCCACCACTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWSGSPA*GPPLEA
Trigger: GGCTTCCAGTGGTGGCCCCAATGCTGGACTCCCAGA...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp AGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTGGGCTGCGCAGGGTCTTTaGGGAGCCGCTCCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: RVLLYLPVLCTGQGGGCWAAQGL*GAAPAD
Trigger: ATCAGCTGGAGCGGCTCCCAAAAGACCCTGCGCAGC...CCAGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGATCTCGGGGCTGGGGTaGGAGGCTGTGCCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLISGLG*EAVPAA
Trigger: AGCAGCGGGCACAGCCTCCAACCCCAGCCCCGAGAT...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGTTACCTCCCTGTACTTaGCACCGGCCAGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVELPPCT*HRPGRR
Trigger: CCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAA...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS CCA 90 bp TGGTTCTGGGTGCAGTTCGGCAGATGGGAATCCAGGAGCTCAGCTTaGACACCCTCCCCACCTCCGGCTCCAAGCCCGGTTCCAAGAGGA +
Preference number: 5 (lower is better)
Translates to: WFWVQFGRWESRSSA*TPSPPPAPSPVPRG
Trigger: TCCTCTTGGAACCGGGCTTGGAGCCGGAGGTGGGGAGGGTGTCCAAGCTGAGCTCCTGGATTCCCATCTGCCGAACTGCACCCAGAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372842.5
ENST00000420034.5
CDS CCA 90 bp ATTTCTAGGCCAGCGGCCCAGCTGCCAGCTTCACGTCTCCTGAGTTaGGGGATCTCTGGTCCCCTGTCCTGCTTTGTGGCCAAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: ISRPAAQLPASRLLS*GISGPLSCFVAKGA
Trigger: GGCTCCCTTGGCCACAAAGCAGGACAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTGGCAGCTGGGCCGCTGGCCTAGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 90 bp AGCCAGGGACTCCTCCCTGTTCTGGTGTCTACAGACCAGGGGTTGTaGCCTTCGATCCCAGTGCCCTGGGGGTACAGAGATGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: SQGLLPVLVSTDQGL*PSIPVPWGYRDARG
Trigger: CCCTCTGGCATCTCTGTACCCCCAGGGCACTGGGATCGAAGGCCACAACCCCTGGTCTGTAGACACCAGAACAGGGAGGAGTCCCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 90 bp GATGTTGGCTCCCCTGGAGCACCGCCGGGGTCCTTAGGACCCTGCTaGGAGGGAAAGAACTCTGCAGCCTCTCGGGAGAGGAGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: DVGSPGAPPGSLGPC*EGKNSAASRERSRK
Trigger: TTTTCTGCTCCTCTCCCGAGAGGCTGCAGAGTTCTTTCCCTCCCAGCAGGGTCCTAAGGACCCCGGCGGTGCTCCAGGGGAGCCAACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420512.5
CDS CCA 90 bp TTGTGGTCCGTGGCACACCAGCTGCCAGCTTCACGTCTCCTGAGTTaGGGGATCTCTGGTCCCCTGTCCTGCTTTGTGGCCAAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LWSVAHQLPASRLLS*GISGPLSCFVAKGA
Trigger: GGCTCCCTTGGCCACAAAGCAGGACAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTGGCAGCTGGTGTGCCACGGACCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420034.5
CDS-3UTR CAA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTGTGCGTCACCTCCTaGCGTCGGTCGCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHLCVTS*RRSPAP
Trigger: GGGTGCTGGCGACCGACGCAAGGAGGTGACGCACAG...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTTCAAGTTTTCTCTCCTaGGCCCGGGGCACCGGAGGG +
Preference number: 5 (lower is better)
Translates to: QGSCFTSLYFAPAREEGASSFLS*ARGTGG
Trigger: CCCTCCGGTGCCCCGGGCCAAGGAGAGAAAACTTGA...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGCAGGTCCCACTGGGGTaGAGCTGGGCCCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: SLGREGILGSAQLETEAGQVPLG*SWALKA
Trigger: AGCCTTCAGGGCCCAGCTCAACCCCAGTGGGACCTG...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp GTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTCCCTGCCAAGGCCAGAAGTGTGCCTaGTACTGCTCGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: VAMPKVVARSDRICSPCQGQKCA*YCSLGC
Trigger: GCACCCCAACGAGCAGTACAAGGCACACTTCTGGCC...TTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS TCA 90 bp CCACATTGTGGTCCGTGGCACACCAGCTGCCAGCTTCACGTCTCCTaGGTTGGGGGATCTCTGGTCCCCTGTCCTGCTTTGTGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: PHCGPWHTSCQLHVS*VGGSLVPCPALWPR
Trigger: CCTTGGCCACAAAGCAGGACAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTGGCAGCTGGTGTGCCACGGACCACAATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420034.5
CDS CCA 90 bp CAACCTGTGCCCGGAAGCCTCCAGCGTGGTCGATCCCTGCCACGTTaGGCCCCAGTGGACTTCAGAGGTTCCTGTCTGCTCCTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: QPVPGSLQRGRSLPR*APVDFRGSCLLLFK
Trigger: TTTGAAGAGGAGCAGACAGGAACCTCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 90 bp CTCGGGAGAGGAGCAGAAAAGGGAGCGGCCTGGCGGCACCACAGATaGGATCGAACTGGGTGTCTGTCACCAACCTCAGACAGGTCCCTT +
Preference number: 5 (lower is better)
Translates to: LGRGAEKGAAWRHHR*DRTGCLSPTSDRSL
Trigger: AAGGGACCTGTCTGAGGTTGGTGACAGACACCCAGTTCGATCCCATCTGTGGTGCCGCCAGGCCGCTCCCTTTTCTGCTCCTCTCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420512.5
CDS CCA 90 bp AGAACTCTGCAGCCTCTCGGGAGAGGAGCAGAAAAGGGAGCGGCCTaGCGGCACCACAGATGGGATCGAACTGGGTGTCTGTCACCAACC +
Preference number: 5 (lower is better)
Translates to: RTLQPLGRGAEKGAA*RHHRWDRTGCLSPT
Trigger: GGTTGGTGACAGACACCCAGTTCGATCCCATCTGTGGTGCCGCCAGGCCGCTCCCTTTTCTGCTCCTCTCCCGAGAGGCTGCAGAGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420512.5
CDS CCA 90 bp ACACCTGTGCCCGGAAGCCTCCAGCGTGGTCGATCCCTGCCACGTTaGGCCCCAGTGGACTTCAGAGGTTCCTGTCTGCTCCTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: TPVPGSLQRGRSLPR*APVDFRGSCLLLFK
Trigger: TTTGAAGAGGAGCAGACAGGAACCTCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411852.5
CDS-3UTR CAA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGCCAAGTGCCCAGGTTTaGGGTGATGCTGCCCCTTTA +
Preference number: 5 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVEPSAQV*GDAAPL
Trigger: TAAAGGGGCAGCATCACCCAAAACCTGGGCACTTGG...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAATCTGGGAGTCCAGCATaGGGGCCACCACTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVESGSPA*GPPLEA
Trigger: GGCTTCCAGTGGTGGCCCCAATGCTGGACTCCCAGA...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGCGGCGCTGGCGGTTCTaGGTGGGGAAGTACTCGGCT +
Preference number: 5 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARRRWRF*VGKYSA
Trigger: AGCCGAGTACTTCCCCACCAAGAACCGCCAGCGCCG...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGCTCCTGGACACTGCTTaGCAGTCATCACCTGGACCT +
Preference number: 5 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVLLDTA*QSSPGP
Trigger: AGGTCCAGGTGATGACTGCAAAGCAGTGTCCAGGAG...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTGGGGTCTGCCCAGCTaGAAACAGAAGCTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLWGLPS*KQKLGA
Trigger: GGCCCCCAGCTTCTGTTTCAAGCTGGGCAGACCCCA...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS TCA 90 bp CGTGGACGGAGACCCCAGCAGCCTGGCAGGCATAGGCGAAGACGATaGTGTCGTCGAAAGGCCAAGTGTAGTTGGGATGTGGCGGGTAGA +
Preference number: 5 (lower is better)
Translates to: RGRRPQQPGRHRRRR*CRRKAKCSWDVAGR
Trigger: TCTACCCGCCACATCCCAACTACACTTGGCCTTTCGACGACATCATCGTCTTCGCCTATGCCTGCCAGGCTGCTGGGGTCTCCGTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000420512.5
ENST00000463535.5
ENST00000612334.1
CDS-3UTR CAA 90 bp CAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGAGGAGGGTGCTTTCACGTCTCCTGAGTaGGGGGATCTCTGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: QGSCFTSLYFAPAREEGAFTSPE*GDLWSP
Trigger: AGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAA...AGCACCCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp GAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGCCCAACTGTGGTGTGTaGAAGAGGGTGGCTTGTCAT +
Preference number: 5 (lower is better)
Translates to: EGAGETQTSSWGRVLRWRPNCGV*KRVACH
Trigger: ATGACAAGCCACCCTCTTCAACACACCACAGTTGGG...CCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp GAGGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTTCTTTGGTCCAGTGCTaGGGACCCTCTTCATCTGGG +
Preference number: 5 (lower is better)
Translates to: EGRVAMPKVVARSDRICSSLVQC*GPSSSG
Trigger: CCCAGATGAAGAGGGTCCCAAGCACTGGACCAAAGA...ACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGATCAGGTGGATGAAGTaGACCCTCTCGTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: GGCWGDPNIKLGEGAEVEIRWMK*TLSSSS
Trigger: GCTGGAAGACGAGAGGGTCAACTTCATCCACCTGAT...CTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp CAGGCCAGGCAGGGTACAGGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTATCAGGTGGATGAAGTaGACCCTCTCGTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: QARQGTGAWESCSFAVRPIRWMK*TLSSSS
Trigger: GCTGGAAGACGAGAGGGTCAACTTCATCCACCTGAT...AGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCCTGTACCCTGCCTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GAGGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTTCGTCAAACCCTATCTaGCTGGGCCTCTTAGAGGGC +
Preference number: 5 (lower is better)
Translates to: EGRVAMPKVVARSDRICSSSNPI*LGLLEG
Trigger: GCCCTCTAAGAGGCCCAGCAAGATAGGGTTTGACGA...ACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGCTGCGCAGGGTCTTTaGGGAGCCGCTCCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARAAQGL*GAAPAD
Trigger: ATCAGCTGGAGCGGCTCCCAAAAGACCCTGCGCAGC...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGTGGGGTCTGCCCAGCTaGAAACAGAAGCTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARWGLPS*KQKLGA
Trigger: GGCCCCCAGCTTCTGTTTCAAGCTGGGCAGACCCCA...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTTACCTCCCTGTACTTaGCACCGGCCAGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLLPPCT*HRPGRR
Trigger: CCTCCTCCCTGGCCGGTGCAAAGTACAGGGAGGTAA...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS TCA 90 bp TCGTCAAACCCTATCTTGCTGGGCCTCTTAGAGGGCCGAGTCACATaGGCTGAGGCCTGCATGCGGGGGCCGTCCACTAGTGCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: SSNPILLGLLEGRVT*AEACMRGPSTSASK
Trigger: CTTAGAAGCACTAGTGGACGGCCCCCGCATGCAGGCCTCAGCTCATGTGACTCGGCCCTCTAAGAGGCCCAGCAAGATAGGGTTTGACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000463535.5
ENST00000487001.6
ENST00000612334.1
ENST00000613052.1
CDS-3UTR CAA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGGGCTGAGCAGAGGCTaGTCCCCAATATCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARGLSRG*SPISSP
Trigger: AGGGGAGGATATTGGGGACAAGCCTCTGCTCAGCCC...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCAGCGAGTGTTCGGCATaGCGGGCCAGGATGGCAAGG +
Preference number: 5 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLSECSA*RARMAR
Trigger: CCTTGCCATCCTGGCCCGCAATGCCGAACACTCGCT...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GGGCCTACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTCTACAGACCAGGGGTaGTGGCCTTCGATCCCAGTG +
Preference number: 5 (lower is better)
Translates to: GPTVCWATCLQGSCFTSLSTDQG*WPSIPV
Trigger: CACTGGGATCGAAGGCCACAACCCCTGGTCTGTAGA...CAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGTAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGAAAGCACTAACACCTTaGAGGTCGAGCTCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVKALTP*RSSSPW
Trigger: CCAAGGAGAGCTCGACCTCAAAGGTGTTAGTGCTTT...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGGCACAGCCACAGGATaGAACCCCAAGGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARGTATG*NPKAAL
Trigger: CAAGGCTGCCTTGGGGTTCAATCCTGTGGCTGTGCC...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGGTGGTGTTGTCCACATaGTGGTCCGTGGCACACCTG +
Preference number: 5 (lower is better)
Translates to: SLGREGILGSAQLETEAGVVLST*WSVAHL
Trigger: CAGGTGTGCCACGGACCACAATGTGGACAACACCAC...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATAGCCGCCCCCTGAAGTaGCTCTCAAAGCGCACGTCA +
Preference number: 5 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHSRPLK*LSKRTS
Trigger: TGACGTGCGCTTTGAGAGCAACTTCAGGGGGCGGCT...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGGCCTTGTACTGCTCGTaGGGGTGCTGGTCGAACATG +
Preference number: 5 (lower is better)
Translates to: SLGREGILGSAQLETEAGALYCS*GCWSNM
Trigger: CATGTTCGACCAGCACCCCAACGAGCAGTACAAGGC...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGGGCCAGAAGTGTGCCTaGTACTGCTCGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARGQKCA*YCSLGC
Trigger: GCACCCCAACGAGCAGTACAAGGCACACTTCTGGCC...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTATCTCGGGGCTGGGGTaGGAGGCTGTGCCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: GVLLLCCETFREWDPSLSISGLG*EAVPAA
Trigger: AGCAGCGGGCACAGCCTCCAACCCCAGCCCCGAGAT...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS CCA 90 bp TTTCTTTGGTCCAGTGCTTGGGACCCTCTTCATCTGGGTAGAACCTaGGCTCGCCCTCAGGCCTCCAGACCACAGCAGCATAGTCATCGC +
Preference number: 5 (lower is better)
Translates to: FLWSSAWDPLHLGRT*ARPQASRPQQHSHR
Trigger: GCGATGACTATGCTGCTGTGGTCTGGAGGCCTGAGGGCGAGCCCAGGTTCTACCCAGATGAAGAGGGTCCCAAGCACTGGACCAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000411852.5
ENST00000420034.5
ENST00000420512.5
ENST00000447915.5
ENST00000612334.1
CDS CCA 90 bp GCTTCAGCTCCATCAGAAACTGGTGCCTTTCTTTGGTCCAGTGCTTaGGACCCTCTTCATCTGGGTAGAACCTGGGCTCGCCCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: ASAPSETGAFLWSSA*DPLHLGRTWARPQA
Trigger: GGCCTGAGGGCGAGCCCAGGTTCTACCCAGATGAAGAGGGTCCCAAGCACTGGACCAAAGAAAGGCACCAGTTTCTGATGGAGCTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000411852.5
ENST00000420034.5
ENST00000420512.5
ENST00000447915.5
ENST00000612334.1
CDS-3UTR CAA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGTTAGCCAGGCTGGTCTaGAACTCCTCACCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLGREGILGSAQLETEAGLARLV*NSSPQV
Trigger: CACCTGAGGTGAGGAGTTCAAGACCAGCCTGGCTAA...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp TCCTTAGGGAGGGAAGGGATCCTGGGGTCTGCCCAGCTTGAAACAGAAGCTGGGTCTTTGGTCCAGTGCTaGGGACCCTCTTCATCTGGG +
Preference number: 5 (lower is better)
Translates to: SLGREGILGSAQLETEAGSLVQC*GPSSSG
Trigger: CCCAGATGAAGAGGGTCCCAAGCACTGGACCAAAGA...CCCAGCTTCTGTTTCAAGCTGGGCAGACCCCAGGATCCCTTCCCTCCCTAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp ACTGTGTGCTGGGCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTCGGCGCTGGCGGTTCTaGGTGGGGAAGTACTCGGCT +
Preference number: 5 (lower is better)
Translates to: TVCWATCLQGSCFTSLYFRRWRF*VGKYSA
Trigger: AGCCGAGTACTTCCCCACCAAGAACCGCCAGCGCCG...AAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGCCCAGCACACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCAGCCGCCCCCTGAAGTaGCTCTCAAAGCGCACGTCA +
Preference number: 5 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLSRPLK*LSKRTS
Trigger: TGACGTGCGCTTTGAGAGCAACTTCAGGGGGCGGCT...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp TGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGGAGGTAGAACTCCTGGACACTGCTTaGCAGTCATCACCTGGACCT +
Preference number: 5 (lower is better)
Translates to: CWGDPNIKLGEGAEVEVELLDTA*QSSPGP
Trigger: AGGTCCAGGTGATGACTGCAAAGCAGTGTCCAGGAG...TTCTACCTCCACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATGTGGTGTTGTCCACATaGTGGTCCGTGGCACACCAG +
Preference number: 5 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHVVLST*WSVAHQ
Trigger: CTGGTGTGCCACGGACCACAATGTGGACAACACCAC...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372838.9
CDS-3UTR CAA 90 bp GGAGGAGGGTGCTGGGGAGACCCAAACATCAAGCTGGGGGAGGGTGCTGAGGTGTTGTTGGTCAGAATGTaGTCTGTGTCTGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: GGGCWGDPNIKLGEGAEVLLVRM*SVSANR
Trigger: CCTGTTTGCAGACACAGACAACATTCTGACCAACAA...CACCTCAGCACCCTCCCCCAGCTTGATGTTTGGGTCTCCCCAGCACCCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GCAACATGTCTGCAAGGGTCCTGCTTTACCTCCCTGTACTTTGCACCGGCCAGGCTGATGGCACTGCTGTaGAGCATCCAGCCATCCACA +
Preference number: 5 (lower is better)
Translates to: ATCLQGSCFTSLYFAPARLMALL*SIQPST
Trigger: TGTGGATGGCTGGATGCTCAACAGCAGTGCCATCAG...CCTGGCCGGTGCAAAGTACAGGGAGGTAAAGCAGGACCCTTGCAGACATGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGAAGCGAGTGTTCGGCATaGCGGGCCAGGATGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LCCETFREWDPSLSGFSRSECSA*RARMAR
Trigger: CCTTGCCATCCTGGCCCGCAATGCCGAACACTCGCT...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GGGGCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATAGCATCTCTGTGGTGTaGTCCACATTGTGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: GAWESCSFAVRPLGNGIHSISVV*STLWSV
Trigger: CACGGACCACAATGTGGACAACACCACAGAGATGCT...ATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GAGGGCAGAGTGGCCATGCCCAAGGTGGTGGCCAGGTCTGACAGGATCTGCAGTTTGTTGGTCAGAATGTaGTCTGTGTCTGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: EGRVAMPKVVARSDRICSLLVRM*SVSANR
Trigger: CCTGTTTGCAGACACAGACAACATTCTGACCAACAA...ACTGCAGATCCTGTCAGACCTGGCCACCACCTTGGGCATGGCCACTCTGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTCGTCAAACCCTATCTaGCTGGGCCTCTTAGAGGGC +
Preference number: 5 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLSSNPI*LGLLEG
Trigger: GCCCTCTAAGAGGCCCAGCAAGATAGGGTTTGACGA...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GCCTGGGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCAGCATCTCTGTGGTGTaGTCCACATTGTGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: AWESCSFAVRPLGNGIHLSISVV*STLWSV
Trigger: CACGGACCACAATGTGGACAACACCACAGAGATGCT...GAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS-3UTR CAA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGCCTTGTACTGCTCGTaGGGGTGCTGGTCGAACATG +
Preference number: 5 (lower is better)
Translates to: GVLLLCCETFREWDPSLSALYCS*GCWSNM
Trigger: CATGTTCGACCAGCACCCCAACGAGCAGTACAAGGC...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS GCA 90 bp TCGGGTGGCAGCTTCCATTTGAGGCCATTTCTAGGCCAGCGGCCCTaGAATGAGAAGCATTCTGGAGAGATGCCAGATTTCTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: SGGSFHLRPFLGQRP*NEKHSGEMPDFFSL
Trigger: AAGGGAGAAGAAATCTGGCATCTCTCCAGAATGCTTCTCATTGCAGGGCCGCTGGCCTAGAAATGGCCTCAAATGGAAGCTGCCACCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447915.5
CDS-3UTR CAA 90 bp GGAGTCCTGCTCCTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTCTGATGGCACTGCTGTaGAGCATCCAGCCATCCACA +
Preference number: 5 (lower is better)
Translates to: GVLLLCCETFREWDPSLSLMALL*SIQPST
Trigger: TGTGGATGGCTGGATGCTCAACAGCAGTGCCATCAG...ACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAGGAGCAGGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372838.9
ENST00000372842.5
CDS CCA 90 bp AAACTGGTGCCTTTCTTTGGTCCAGTGCTTGGGACCCTCTTCATCTaGGTAGAACCTGAGGGGATAGAGGTGAGATGTTCCCATGGGGTA +
Preference number: 5 (lower is better)
Translates to: KLVPFFGPVLGTLFI*VEPEGIEVRCSHGV
Trigger: TACCCCATGGGAACATCTCACCTCTATCCCCTCAGGTTCTACCCAGATGAAGAGGGTCCCAAGCACTGGACCAAAGAAAGGCACCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483737.1
CDS CCA 90 bp GATGAAAAGTACCTCGACTTTAAGGATCACACCTGGTGCATTCCCTaGTTACCTTCGTTAGGTGGGCAGATACCTACCTATGTGACCTGT +
Preference number: 5 (lower is better)
Translates to: DEKYLDFKDHTWCIP*LPSLGGQIPTYVTC
Trigger: ACAGGTCACATAGGTAGGTATCTGCCCACCTAACGAAGGTAACCAGGGAATGCACCAGGTGTGATCCTTAAAGTCGAGGTACTTTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS-3UTR CAA 90 bp CTTTGCTGTGAGACCTTTAGGGAATGGGATCCATCTCTGAGTGGTTTCTCCCGAGTTGAAGAGGGTGGCTaGTCATTTTTCTCAGTTTAC +
Preference number: 5 (lower is better)
Translates to: LCCETFREWDPSLSGFSRVEEGG*SFFSVY
Trigger: GTAAACTGAGAAAAATGACAAGCCACCCTCTTCAAC...TCGGGAGAAACCACTCAGAGATGGATCCCATTCCCTAAAGGTCTCACAGCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 90 bp TGCATTTTGAAAGATGAAAAGTACCTCGACTTTAAGGATCACACCTaGTGCATTCCCTGGTTACCTTCGTTAGGTGGGCAGATACCTACC +
Preference number: 5 (lower is better)
Translates to: CILKDEKYLDFKDHT*CIPWLPSLGGQIPT
Trigger: GGTAGGTATCTGCCCACCTAACGAAGGTAACCAGGGAATGCACCAGGTGTGATCCTTAAAGTCGAGGTACTTTTCATCTTTCAAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS GCA 90 bp ATTTTGAAAGATGAAAAGTACCTCGACTTTAAGGATCACACCTGGTaGATTCCCTGGTTACCTTCGTTAGGTGGGCAGATACCTACCTAT +
Preference number: 5 (lower is better)
Translates to: ILKDEKYLDFKDHTW*IPWLPSLGGQIPTY
Trigger: ATAGGTAGGTATCTGCCCACCTAACGAAGGTAACCAGGGAATGCACCAGGTGTGATCCTTAAAGTCGAGGTACTTTTCATCTTTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS TCA 72 bp CCGGATTCCCCGGCCCACGCAGCCGACTCTTCGACCTaGGCCGCAGACCCAGAGGGGCGGCGCCCACTCGGC +
Preference number: 6 (lower is better)
Translates to: PDSPAHAADSST*AADPEGRRPLG
Trigger: GCCGAGTGGGCGCCGCCCCTCTGGGTCTGCGGCTCAGGTCGAAGAGTCGGCTGCGTGGGCCGGGGAATCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS GCA 72 bp GCAGCATGCGGCGCAGAGGCTGTGAGGCCAGCAGCTTaGGGGCACCCGCCAGACGCAGGGCATAGGCCAGCG +
Preference number: 6 (lower is better)
Translates to: AACGAEAVRPAA*GHPPDAGHRPA
Trigger: CGCTGGCCTATGCCCTGCGTCTGGCGGGTGCCCGCAAGCTGCTGGCCTCACAGCCTCTGCGCCGCATGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000463535.5
ENST00000612334.1
ENST00000613052.1
CDS CCA 72 bp TCTGTCGTCTCCCAGCAGGGGGCTCGGGGTCCTCTCTaGCGGCTCGGGCTGGCAGGGCCGTCAGAGGGCCAT +
Preference number: 6 (lower is better)
Translates to: SVVSQQGARGPL*RLGLAGPSEGH
Trigger: ATGGCCCTCTGACGGCCCTGCCAGCCCGAGCCGCCAGAGAGGACCCCGAGCCCCCTGCTGGGAGACGACAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411852.5
ENST00000493788.5
CDS GCA 72 bp GAGCGCCCAGGTAGTGGGGCAGCGAGTGTTCGGCATTaGGGGCCAGGATGGCAAGGACCACGGCGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: ERPGSGAASVRH*GPGWQGPRRAA
Trigger: CGCTGCCCGCCGTGGTCCTTGCCATCCTGGCCCGCAATGCCGAACACTCGCTGCCCCACTACCTGGGCGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000411852.5
ENST00000493788.5
CDS CAA 90 bp CCCGCTGCTGCCAGTCAGGTCCAGGCGGGGGCTGCGCAGGGTCTTTaGGGAGCCGCTCCAGCTGATGAGGCGGCCGCTGTCATCATCCCA +
Preference number: 6 (lower is better)
Translates to: PAAASQVQAGAAQGL*GAAPADEAAAVIIP
Trigger: TGGGATGATGACAGCGGCCGCCTCATCAGCTGGAGCGGCTCCCAAAAGACCCTGCGCAGCCCCCGCCTGGACCTGACTGGCAGCAGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000612334.1
ENST00000613052.1
CDS TCA 72 bp CGGTCTGACTCCCCTGCACAGCCCGGAGCCCAGTGCTaGTGGCACCCCCAACCTGTGCCCGGAAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: RSDSPAQPGAQC*WHPQPVPGSLQ
Trigger: CTGGAGGCTTCCGGGCACAGGTTGGGGGTGCCATCAGCACTGGGCTCCGGGCTGTGCAGGGGAGTCAGACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 72 bp GACCAGAAGGAGGGGTGGGTGTCCCGCGTCGGCCTGTaGCCTCAGAGGTCTGTCGTCTCCCAGCAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: DQKEGWVSRVGL*PQRSVVSQQGA
Trigger: AGCCCCCTGCTGGGAGACGACAGACCTCTGAGGCCACAGGCCGACGCGGGACACCCACCCCTCCTTCTGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372842.5
ENST00000411852.5
ENST00000493788.5
CDS CCA 72 bp GGTCCGTGGCACACCTGTGCCCGGAAGCCTCCAGCGTaGTCGATCCCTGCCACGTTGGGCCCCAGTGGACTT +
Preference number: 6 (lower is better)
Translates to: GPWHTCARKPPA*SIPATLGPSGL
Trigger: AAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTGTGCCACGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411852.5
CDS CAA 72 bp GCGGTCCGCTCCTTAAGTCCCCTGTGCGTCACCTCCTaGCGTCGGTCGCCAGCACCCGCATTGCTTCGGCCC +
Preference number: 6 (lower is better)
Translates to: AVRSLSPLCVTS*RRSPAPALLRP
Trigger: GGGCCGAAGCAATGCGGGTGCTGGCGACCGACGCAAGGAGGTGACGCACAGGGGACTTAAGGAGCGGACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 72 bp ATGGCACCCCCAACCTGTGCCCGGAAGCCTCCAGCGTaGTCGATCCCTGCCACGTTGGGCCCCAGTGGACTT +
Preference number: 6 (lower is better)
Translates to: MAPPTCARKPPA*SIPATLGPSGL
Trigger: AAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTTGGGGGTGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 72 bp GAGCAGGGGCTGGGCGGAGAAGGCCACCAGGTCCCGTaGCCAGAAGTGTGCCTTGTACTGCTCGTTGGGGTG +
Preference number: 6 (lower is better)
Translates to: EQGLGGEGHQVP*PEVCLVLLVGV
Trigger: CACCCCAACGAGCAGTACAAGGCACACTTCTGGCCACGGGACCTGGTGGCCTTCTCCGCCCAGCCCCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000612334.1
ENST00000613052.1
CDS CCA 72 bp TCCCCTGGAGCACCGCCGGGGTCCTTAGGACCCTGCTaGGAGGGAAAGAACTCTGCAGCCTCTCGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: SPGAPPGSLGPC*EGKNSAASRER
Trigger: CCTCTCCCGAGAGGCTGCAGAGTTCTTTCCCTCCCAGCAGGGTCCTAAGGACCCCGGCGGTGCTCCAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420512.5
CDS CCA 72 bp GAGCAGGGGCTGGGCGGAGAAGGCCACCAGGTCCCGTaGCCAGAAGTGTGCCTTGTACTGCTCGCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: EQGLGGEGHQVP*PEVCLVLLALP
Trigger: GGGAAGAGCGAGCAGTACAAGGCACACTTCTGGCCACGGGACCTGGTGGCCTTCTCCGCCCAGCCCCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487001.6
CDS GCA 72 bp CACCTGTGCCCGGAAGCCTCCAGCGTGGTCGATCCCTaGCACGTTGGGCCCCAGTGGACTTCAGAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: HLCPEASSVVDP*HVGPQWTSEVP
Trigger: AGGAACCTCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411852.5
CDS CCA 72 bp CCCGGAAGCCTCCAGCGTGGTCGATCCCTGCCACGTTaGGCCCCAGTGGACTTCAGAGGTTCCTGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: PGSLQRGRSLPR*APVDFRGSCLL
Trigger: GAGCAGACAGGAACCTCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372842.5
ENST00000411852.5
ENST00000493788.5
CDS CAA 72 bp GCCCGGAAGCCTCCAGCGTGGTCGATCCCTGCCACGTaGGGCCCCAGTGGACTTCAGAGGTTCCTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: ARKPPAWSIPAT*GPSGLQRFLSA
Trigger: AGCAGACAGGAACCTCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372842.5
ENST00000411852.5
ENST00000493788.5
CDS GCA 72 bp AACCTGTGCCCGGAAGCCTCCAGCGTGGTCGATCCCTaGCACGTTGGGCCCCAGTGGACTTCAGAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: NLCPEASSVVDP*HVGPQWTSEVP
Trigger: AGGAACCTCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 72 bp GTGCAGTTCGGCAGATGGGAATCCAGGAGCTCAGCTTaGACACCCTCCCCACCTCCGGCTCCAAGCCCGGTT +
Preference number: 6 (lower is better)
Translates to: VQFGRWESRSSA*TPSPPPAPSPV
Trigger: AACCGGGCTTGGAGCCGGAGGTGGGGAGGGTGTCCAAGCTGAGCTCCTGGATTCCCATCTGCCGAACTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372842.5
ENST00000420034.5
CDS CAA 90 bp CTGGTTCTGGGTGCAGTTCGGCAGATGGGAATCCAGGAGCTCAGCTaGGACACCCTCCCCACCTCCGGCTCCAAGCCCGGTTCCAAGAGG +
Preference number: 6 (lower is better)
Translates to: LVLGAVRQMGIQELS*DTLPTSGSKPGSKR
Trigger: CCTCTTGGAACCGGGCTTGGAGCCGGAGGTGGGGAGGGTGTCCAAGCTGAGCTCCTGGATTCCCATCTGCCGAACTGCACCCAGAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372842.5
ENST00000420034.5
CDS CAA 90 bp CCAACCTGTGCCCGGAAGCCTCCAGCGTGGTCGATCCCTGCCACGTaGGGCCCCAGTGGACTTCAGAGGTTCCTGTCTGCTCCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: PTCARKPPAWSIPAT*GPSGLQRFLSAPLQ
Trigger: TTGAAGAGGAGCAGACAGGAACCTCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CAA 90 bp CACACCTGTGCCCGGAAGCCTCCAGCGTGGTCGATCCCTGCCACGTaGGGCCCCAGTGGACTTCAGAGGTTCCTGTCTGCTCCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: HTCARKPPAWSIPAT*GPSGLQRFLSAPLQ
Trigger: TTGAAGAGGAGCAGACAGGAACCTCTGAAGTCCACTGGGGCCCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCACAGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411852.5
CDS TCA 72 bp GGTCCGTGGCACACCAGCTGCCAGCTTCACGTCTCCTaGGTTGGGGGATCTCTGGTCCCCTGTCCTGCTTTG +
Preference number: 6 (lower is better)
Translates to: GPWHTSCQLHVS*VGGSLVPCPAL
Trigger: CAAAGCAGGACAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTGGCAGCTGGTGTGCCACGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420034.5
CDS GCA 72 bp GGCGGAGAAGGCCACCAGGTCCCGTGGCCAGAAGTGTaGCTTGTACTGCTCGTTGGGGTGCTGGTCGAACAT +
Preference number: 6 (lower is better)
Translates to: GGEGHQVPWPEV*LVLLVGVLVEH
Trigger: ATGTTCGACCAGCACCCCAACGAGCAGTACAAGGCACACTTCTGGCCACGGGACCTGGTGGCCTTCTCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000612334.1
ENST00000613052.1
CDS GCA 72 bp GGGGTCCTTAGGACCCTGCTGGGAGGGAAAGAACTCTaGAGCCTCTCGGGAGAGGAGCAGAAAAGGGAGCGG +
Preference number: 6 (lower is better)
Translates to: GVLRTLLGGKEL*SLSGEEQKRER
Trigger: CCGCTCCCTTTTCTGCTCCTCTCCCGAGAGGCTGCAGAGTTCTTTCCCTCCCAGCAGGGTCCTAAGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420512.5
CDS CCA 72 bp GCTGCCAGCTTCACGTCTCCTGAGTTGGGGGATCTCTaGTCCCCTGTCCTGCTTTGTGGCCAAGGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: AASFTSPELGDL*SPVLLCGQGSP
Trigger: TGGGCTCCCTTGGCCACAAAGCAGGACAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372842.5
ENST00000420034.5
CDS CCA 72 bp GCTCCAGCTGATGAGGCGGCCGCTGTCATCATCCCATaGAGAGGATGTCTCCGTGTCACTGAGCCACTCGGC +
Preference number: 6 (lower is better)
Translates to: APADEAAAVIIP*RGCLRVTEPLG
Trigger: GCCGAGTGGCTCAGTGACACGGAGACATCCTCTCCATGGGATGATGACAGCGGCCGCCTCATCAGCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000612334.1
ENST00000613052.1
CDS CCA 72 bp CACTCCTGCAGCATCTCTGTGGTGTTGTCCACATTGTaGTCCGTGGCACACCAGAGGGCCATCCTGGCCCGG +
Preference number: 6 (lower is better)
Translates to: HSCSISVVLSTL*SVAHQRAILAR
Trigger: CCGGGCCAGGATGGCCCTCTGGTGTGCCACGGACCACAATGTGGACAACACCACAGAGATGCTGCAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372838.9
CDS CCA 72 bp GGGAGCGGCCTGGCGGCACCACAGATGGGATCGAACTaGGTGTCTGTCACCAACCTCAGACAGGTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: GSGLAAPQMGSN*VSVTNLRQVPF
Trigger: GAAAGGGACCTGTCTGAGGTTGGTGACAGACACCCAGTTCGATCCCATCTGTGGTGCCGCCAGGCCGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420512.5
CDS CCA 72 bp GTGGCACACCAGCTGCCAGCTTCACGTCTCCTGAGTTaGGGGATCTCTGGTCCCCTGTCCTGCTTTGTGGCC +
Preference number: 6 (lower is better)
Translates to: VAHQLPASRLLS*GISGPLSCFVA
Trigger: GGCCACAAAGCAGGACAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTGGCAGCTGGTGTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420034.5
CDS CAA 72 bp CGTGGCACACCAGCTGCCAGCTTCACGTCTCCTGAGTaGGGGGATCTCTGGTCCCCTGTCCTGCTTTGTGGC +
Preference number: 6 (lower is better)
Translates to: RGTPAASFTSPE*GDLWSPVLLCG
Trigger: GCCACAAAGCAGGACAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTGGCAGCTGGTGTGCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420034.5
CDS CAA 90 bp ATTGTGGTCCGTGGCACACCAGCTGCCAGCTTCACGTCTCCTGAGTaGGGGGATCTCTGGTCCCCTGTCCTGCTTTGTGGCCAAGGGAGC +
Preference number: 6 (lower is better)
Translates to: IVVRGTPAASFTSPE*GDLWSPVLLCGQGS
Trigger: GCTCCCTTGGCCACAAAGCAGGACAGGGGACCAGAGATCCCCCAACTCAGGAGACGTGAAGCTGGCAGCTGGTGTGCCACGGACCACAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420034.5
CDS CCA 72 bp TCCAGTGCTTGGGACCCTCTTCATCTGGGTAGAACCTaGGCTCGCCCTCAGGCCTCCAGACCACAGCAGCAT +
Preference number: 6 (lower is better)
Translates to: SSAWDPLHLGRT*ARPQASRPQQH
Trigger: ATGCTGCTGTGGTCTGGAGGCCTGAGGGCGAGCCCAGGTTCTACCCAGATGAAGAGGGTCCCAAGCACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000411852.5
ENST00000420034.5
ENST00000420512.5
ENST00000447915.5
ENST00000612334.1
CDS CCA 72 bp GGAGCAGAAAAGGGAGCGGCCTGGCGGCACCACAGATaGGATCGAACTGGGTGTCTGTCACCAACCTCAGAC +
Preference number: 6 (lower is better)
Translates to: GAEKGAAWRHHR*DRTGCLSPTSD
Trigger: GTCTGAGGTTGGTGACAGACACCCAGTTCGATCCCATCTGTGGTGCCGCCAGGCCGCTCCCTTTTCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420512.5
CDS CCA 72 bp CACTCCTGCAGCATCTCTGTGGTGTTGTCCACATTGTaGTCCGTGGCACACCTGTGCCCGGAAGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: HSCSISVVLSTL*SVAHLCPEASS
Trigger: GCTGGAGGCTTCCGGGCACAGGTGTGCCACGGACCACAATGTGGACAACACCACAGAGATGCTGCAGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411852.5
CDS CAA 72 bp TCAAAGCCTCCACCAGGATCGGGTGGCAGCTTCCATTaGAGGCCATTTCTAGGCCAGCGGCCCAGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: SKPPPGSGGSFH*RPFLGQRPSCQ
Trigger: CTGGCAGCTGGGCCGCTGGCCTAGAAATGGCCTCAAATGGAAGCTGCCACCCGATCCTGGTGGAGGCTTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS GCA 72 bp GTAGTTGGGATGTGGCGGGTAGAAAGCAAGCTGGTCTaGCCCTTCAGCCCGCAGGGATGCAAGGAAGGTGGA +
Preference number: 6 (lower is better)
Translates to: VVGMWRVESKLV*PFSPQGCKEGG
Trigger: TCCACCTTCCTTGCATCCCTGCGGGCTGAAGGGGCAGACCAGCTTGCTTTCTACCCGCCACATCCCAACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000420512.5
ENST00000463535.5
ENST00000483893.5
ENST00000612334.1
CDS GCA 72 bp TCACCGGCACATTCATGTACCCATAACGGTGCTCATTaGACACGTGGACGGAGACCCCAGCAGCCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: SPAHSCTHNGAH*TRGRRPQQPGR
Trigger: CCTGCCAGGCTGCTGGGGTCTCCGTCCACGTGTGCAATGAGCACCGTTATGGGTACATGAATGTGCCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000420512.5
ENST00000463535.5
ENST00000612334.1
CDS GCA 72 bp CTCTGGGCAGTAGTGGCCTGCTCCTGGACACTGCTTTaGAGTCATCACCTGGACCTAGAGCTCATCTCGGGG +
Preference number: 6 (lower is better)
Translates to: LWAVVACSWTLL*SHHLDLELISG
Trigger: CCCCGAGATGAGCTCTAGGTCCAGGTGATGACTGCAAAGCAGTGTCCAGGAGCAGGCCACTACTGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000613052.1
CDS GCA 72 bp GGCGGAGAAGGCCACCAGGTCCCGTGGCCAGAAGTGTaGCTTGTACTGCTCGCTCTTCCCAGATGGAGTAAT +
Preference number: 6 (lower is better)
Translates to: GGEGHQVPWPEV*LVLLALPRWSN
Trigger: ATTACTCCATCTGGGAAGAGCGAGCAGTACAAGGCACACTTCTGGCCACGGGACCTGGTGGCCTTCTCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487001.6
CDS CCA 72 bp CTCCTCCCTGTTCTGGTGTCTACAGACCAGGGGTTGTaGCCTTCGATCCCAGTGCCCTGGGGGTACAGAGAT +
Preference number: 6 (lower is better)
Translates to: LLPVLVSTDQGL*PSIPVPWGYRD
Trigger: ATCTCTGTACCCCCAGGGCACTGGGATCGAAGGCCACAACCCCTGGTCTGTAGACACCAGAACAGGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 72 bp CCTTTCTTTGGTCCAGTGCTTGGGACCCTCTTCATCTaGGTAGAACCTGGGCTCGCCCTCAGGCCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: PFFGPVLGTLFI*VEPGLALRPPD
Trigger: GTCTGGAGGCCTGAGGGCGAGCCCAGGTTCTACCCAGATGAAGAGGGTCCCAAGCACTGGACCAAAGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000411852.5
ENST00000420034.5
ENST00000420512.5
ENST00000447915.5
ENST00000612334.1
CDS CCA 72 bp CACTCCTGCAGCATCTCTGTGGTGTTGTCCACATTGTaGTCCGTGGCACACCTAGTGCAGGGGCAGCACGTG +
Preference number: 6 (lower is better)
Translates to: HSCSISVVLSTL*SVAHLVQGQHV
Trigger: CACGTGCTGCCCCTGCACTAGGTGTGCCACGGACCACAATGTGGACAACACCACAGAGATGCTGCAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447915.5
CDS CAA 72 bp GAGAAGGCCACCAGGTCCCGTGGCCAGAAGTGTGCCTaGTACTGCTCGTTGGGGTGCTGGTCGAACATGATG +
Preference number: 6 (lower is better)
Translates to: EKATRSRGQKCA*YCSLGCWSNMM
Trigger: CATCATGTTCGACCAGCACCCCAACGAGCAGTACAAGGCACACTTCTGGCCACGGGACCTGGTGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000612334.1
ENST00000613052.1
CDS CAA 90 bp ATGCGGGGGCCGTCCACTAGTGCTTCTAAGATCAGGTGGATGAAGTaGACCCTCTCGTCTTCCAGCCCCTGGTGGGATTTCACCGGCACA +
Preference number: 6 (lower is better)
Translates to: MRGPSTSASKIRWMK*TLSSSSPWWDFTGT
Trigger: TGTGCCGGTGAAATCCCACCAGGGGCTGGAAGACGAGAGGGTCAACTTCATCCACCTGATCTTAGAAGCACTAGTGGACGGCCCCCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000463535.5
ENST00000483893.5
ENST00000487001.6
ENST00000612334.1
CDS GCA 72 bp CACGTTGGGCCCCAGTGGACTTCAGAGGTTCCTGTCTaGTCCTCTTCAAATCCAGCCAACCACAGGTCCCAC +
Preference number: 6 (lower is better)
Translates to: HVGPQWTSEVPV*SSSNPANHRSH
Trigger: GTGGGACCTGTGGTTGGCTGGATTTGAAGAGGAGCAGACAGGAACCTCTGAAGTCCACTGGGGCCCAACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372842.5
ENST00000411852.5
ENST00000493788.5
CDS CCA 72 bp ATGCGGGGGCCGTCCACTAGTGCTTCTAAGATCAGGTaGATGAAGTTGACCCTCTCGTCTTCCAGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: MRGPSTSASKIR*MKLTLSSSSPW
Trigger: CCAGGGGCTGGAAGACGAGAGGGTCAACTTCATCCACCTGATCTTAGAAGCACTAGTGGACGGCCCCCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000463535.5
ENST00000483893.5
ENST00000487001.6
ENST00000612334.1
CDS CCA 72 bp CACTCCTGCAGCATCTCTGTGGTGTTGTCCACATTGTaGTCCGTGGCACACCAGCTGCCAGCTTCACGTCTC +
Preference number: 6 (lower is better)
Translates to: HSCSISVVLSTL*SVAHQLPASRL
Trigger: GAGACGTGAAGCTGGCAGCTGGTGTGCCACGGACCACAATGTGGACAACACCACAGAGATGCTGCAGGAGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420034.5
CDS CAA 72 bp TCAAAGCCTCCACCAGGATCGGGTGGCAGCTTCCATTaGAGGCCATTTCTAGGCCAGCGGCCCTGCAATGAG +
Preference number: 6 (lower is better)
Translates to: SKPPPGSGGSFH*RPFLGQRPCNE
Trigger: CTCATTGCAGGGCCGCTGGCCTAGAAATGGCCTCAAATGGAAGCTGCCACCCGATCCTGGTGGAGGCTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447915.5
CDS CAA 72 bp GAGAAGGCCACCAGGTCCCGTGGCCAGAAGTGTGCCTaGTACTGCTCGCTCTTCCCAGATGGAGTAATGGCT +
Preference number: 6 (lower is better)
Translates to: EKATRSRGQKCA*YCSLFPDGVMA
Trigger: AGCCATTACTCCATCTGGGAAGAGCGAGCAGTACAAGGCACACTTCTGGCCACGGGACCTGGTGGCCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487001.6
CDS TCA 72 bp TCCCCTGCCCCTCATCTTTCCTATTTGAGGGAAGACTaGCACCCTCAAAGCCCAGCTGGAGGCATCTCTGCC +
Preference number: 6 (lower is better)
Translates to: SPAPHLSYLRED*HPQSPAGGISA
Trigger: GGCAGAGATGCCTCCAGCTGGGCTTTGAGGGTGTCAGTCTTCCCTCAAATAGGAAAGATGAGGGGCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372842.5
ENST00000420034.5
CDS TCA 72 bp AGACCCCAGCAGCCTGGCAGGCATAGGCGAAGACGATaGTGTCGTCGAAAGGCCAAGTGTAGTTGGGATGTG +
Preference number: 6 (lower is better)
Translates to: RPQQPGRHRRRR*CRRKAKCSWDV
Trigger: CACATCCCAACTACACTTGGCCTTTCGACGACATCATCGTCTTCGCCTATGCCTGCCAGGCTGCTGGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000420512.5
ENST00000463535.5
ENST00000612334.1
CDS TCA 72 bp TCCAGTGCTTGGGACCCTCTTCATCTGGGTAGAACCTaGGGGGATAGAGGTGAGATGTTCCCATGGGGTACA +
Preference number: 6 (lower is better)
Translates to: SSAWDPLHLGRT*GDRGEMFPWGT
Trigger: TGTACCCCATGGGAACATCTCACCTCTATCCCCTCAGGTTCTACCCAGATGAAGAGGGTCCCAAGCACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483737.1
CDS GCA 72 bp GTGAGGGCTTCCTGCTTCAGCTCCATCAGAAACTGGTaGCTTTCTTTGGTCCAGTGCTTGGGACCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: VRASCFSSIRNW*LSLVQCLGPSS
Trigger: TGAAGAGGGTCCCAAGCACTGGACCAAAGAAAGGCACCAGTTTCTGATGGAGCTGAAGCAGGAAGCCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000411852.5
ENST00000420034.5
ENST00000420512.5
ENST00000447915.5
ENST00000483737.1
ENST00000612334.1
CDS CAA 72 bp CCGTCCACTAGTGCTTCTAAGATCAGGTGGATGAAGTaGACCCTCTCGTCTTCCAGCCCCTGGTGGGATTTC +
Preference number: 6 (lower is better)
Translates to: PSTSASKIRWMK*TLSSSSPWWDF
Trigger: GAAATCCCACCAGGGGCTGGAAGACGAGAGGGTCAACTTCATCCACCTGATCTTAGAAGCACTAGTGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000463535.5
ENST00000483893.5
ENST00000487001.6
ENST00000612334.1
CDS TCA 72 bp ACTGGAAGCCCCTGCCCCATGAGAAGCCGCAGAGTCTaGTTGTTGGTCAGAATGTTGTCTGTGTCTGCAAAC +
Preference number: 6 (lower is better)
Translates to: TGSPCPMRSRRV*LLVRMLSVSAN
Trigger: GTTTGCAGACACAGACAACATTCTGACCAACAATCAGACTCTGCGGCTTCTCATGGGGCAGGGGCTTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000420512.5
ENST00000447915.5
ENST00000463535.5
ENST00000483737.1
ENST00000612334.1
CDS CCA 72 bp CCTGCTTCAGCTCCATCAGAAACTGGTGCCTTTCTTTaGTCCAGTGCTTGGGACCCTCTTCATCTGGGTAGA +
Preference number: 6 (lower is better)
Translates to: PASAPSETGAFL*SSAWDPLHLGR
Trigger: TCTACCCAGATGAAGAGGGTCCCAAGCACTGGACCAAAGAAAGGCACCAGTTTCTGATGGAGCTGAAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000372838.9
ENST00000372842.5
ENST00000411852.5
ENST00000420034.5
ENST00000420512.5
ENST00000447915.5
ENST00000483737.1
ENST00000612334.1
CDS CCA 72 bp CCTTTCTTTGGTCCAGTGCTTGGGACCCTCTTCATCTaGGTAGAACCTGAGGGGATAGAGGTGAGATGTTCC +
Preference number: 6 (lower is better)
Translates to: PFFGPVLGTLFI*VEPEGIEVRCS
Trigger: GGAACATCTCACCTCTATCCCCTCAGGTTCTACCCAGATGAAGAGGGTCCCAAGCACTGGACCAAAGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483737.1
CDS TCA 72 bp CCATTTGAGGCCATTTCTAGGCCAGCGGCCCTGCAATaGGAAGCATTCTGGAGAGATGCCAGATTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: PFEAISRPAALQ*EAFWRDARFLL
Trigger: GAGAAGAAATCTGGCATCTCTCCAGAATGCTTCTCATTGCAGGGCCGCTGGCCTAGAAATGGCCTCAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447915.5
CDS CCA 72 bp TACCTCGACTTTAAGGATCACACCTGGTGCATTCCCTaGTTACCTTCGTTAGGTGGGCAGATACCTACCTAT +
Preference number: 6 (lower is better)
Translates to: YLDFKDHTWCIP*LPSLGGQIPTY
Trigger: ATAGGTAGGTATCTGCCCACCTAACGAAGGTAACCAGGGAATGCACCAGGTGTGATCCTTAAAGTCGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS GCA 72 bp GATGAAAAGTACCTCGACTTTAAGGATCACACCTGGTaGATTCCCTGGTTACCTTCGTTAGGTGGGCAGATA +
Preference number: 6 (lower is better)
Translates to: DEKYLDFKDHTW*IPWLPSLGGQI
Trigger: TATCTGCCCACCTAACGAAGGTAACCAGGGAATGCACCAGGTGTGATCCTTAAAGTCGAGGTACTTTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5
CDS CCA 72 bp AAAGATGAAAAGTACCTCGACTTTAAGGATCACACCTaGTGCATTCCCTGGTTACCTTCGTTAGGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: KDEKYLDFKDHT*CIPWLPSLGGQ
Trigger: CTGCCCACCTAACGAAGGTAACCAGGGAATGCACCAGGTGTGATCCTTAAAGTCGAGGTACTTTTCATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372842.5