RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP95 (Homo sapiens)

Ensembl gene IDs: ENSG00000258890

Ensembl transcript IDs: ENST00000553412.5, ENST00000553956.6, ENST00000556440.7, ENST00000577960.1, ENST00000579637.1, ENST00000579860.5, ENST00000580188.1, ENST00000580285.1, ENST00000581056.5, ENST00000581885.1, ENST00000582724.1, ENST00000583457.1, ENST00000583676.1, ENST00000584857.1

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCTTGACTTCTTTGGCCCATACTCCACGATGCCATCACTGTGCTaGGACAGTGTCTCCTCAGTTCCATCCTCTACCTCCTCATTTCCA +
Preference number: 1 (lower is better)
Translates to: GLDFFGPYSTMPSLC*DSVSSVPSSTSSFP
Trigger: TGGAAATGAGGAGGTAGAGGATGGAACTGAGGAGACACTGTCTCAGCACAGTGATGGCATCGTGGAGTATGGGCCAAAGAAGTCAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR GCA 90 bp GCATGGAAAGTCCTGGCCTTGACTTCTTTGGCCCATACTCCACGATaGCATCACTGTGCTGAGACAGTGTCTCCTCAGTTCCATCCTCTA +
Preference number: 1 (lower is better)
Translates to: AWKVLALTSLAHTPR*HHCAETVSPQFHPL
Trigger: TAGAGGATGGAACTGAGGAGACACTGTCTCAGCACAGTGATGGCATCGTGGAGTATGGGCCAAAGAAGTCAAGGCCAGGACTTTCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR TCA 90 bp GGCTTAGAGAGCTGCCATCATATAGTGAGAGGAAGAACCCAGCACTaGACCCATGGTCTTCCTTCGAACCCCTCCTTCTTCAGTGGTAAA +
Preference number: 1 (lower is better)
Translates to: GLESCHHIVRGRTQH*THGLPSNPSFFSGK
Trigger: TTTACCACTGAAGAAGGAGGGGTTCGAAGGAAGACCATGGGTTCAGTGCTGGGTTCTTCCTCTCACTATATGATGGCAGCTCTCTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582724.1
3UTR TCA 90 bp TTTCTTTTTCCTTTGGGAGGCTTCCTTGTCCTAGGCCCTTGGACCTaGGCTGGATATACTTCCCATTTGCTGCCTTTAGGCAACTTGGAA +
Preference number: 1 (lower is better)
Translates to: FLFPLGGFLVLGPWT*AGYTSHLLPLGNLE
Trigger: TTCCAAGTTGCCTAAAGGCAGCAAATGGGAAGTATATCCAGCTCAGGTCCAAGGGCCTAGGACAAGGAAGCCTCCCAAAGGAAAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR TCA 90 bp AGGGACTTTTACTGTACTGAAAGGAAGCCAGCTGAAGCCGAGATCTaGAGCGCTCAGCTTCCAGTTCCCGGAAGAAAACATCATCATCAT +
Preference number: 1 (lower is better)
Translates to: RDFYCTERKPAEAEI*SAQLPVPGRKHHHH
Trigger: ATGATGATGATGTTTTCTTCCGGGAACTGGAAGCTGAGCGCTTCAGATCTCGGCTTCAGCTGGCTTCCTTTCAGTACAGTAAAAGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR CCA 90 bp CCTTTTTCTCTCCAAGTGGAACTGTTTGTGTTTGTTAACTGGAGATaGAGAGAGCGAATGGGATCTGTAGGGTGGCTTTCTACGCATGGA +
Preference number: 1 (lower is better)
Translates to: PFSLQVELFVFVNWR*RERMGSVGWLSTHG
Trigger: TCCATGCGTAGAAAGCCACCCTACAGATCCCATTCGCTCTCTCCATCTCCAGTTAACAAACACAAACAGTTCCACTTGGAGAGAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR CCA 90 bp TTTCGAGCACGAACGATTTGCTGTCGATTTTCTTTTATCTTTGATTaGGTCAACCTTTGCCTACGAATGCAGTCCTTGAAGTCTTGCAGT +
Preference number: 1 (lower is better)
Translates to: FRARTICCRFSFIFD*VNLCLRMQSLKSCS
Trigger: ACTGCAAGACTTCAAGGACTGCATTCGTAGGCAAAGGTTGACCCAATCAAAGATAAAAGAAAATCGACAGCAAATCGTTCGTGCTCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR GCA 90 bp TGCAATGACAAATATCTGAAATATTTAGGCTGTCACAAATGTAAGTaGAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCT +
Preference number: 1 (lower is better)
Translates to: CNDKYLKYLGCHKCK*RLKTQMHQFFLLMP
Trigger: AGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCACTTACATTTGTGACAGCCTAAATATTTCAGATATTTGTCATTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
3UTR GCA 90 bp ATGTATGTGCCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTaGACTGTCACAGCATCAACGTTTTTAAAGAATATTGAGTTTGTA +
Preference number: 1 (lower is better)
Translates to: MYVPMPKSSNKINAV*TVTASTFLKNIEFV
Trigger: TACAAACTCAATATTCTTTAAAAACGTTGATGCTGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGGCACATACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583676.1
3UTR-3UTR GCA 90 bp CTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAAGTCTGGCCTCATAGGGCCCATACTCCACGATaGCATCACTGTGCTGAGACA +
Preference number: 2 (lower is better)
Translates to: LVKASRTFTYYYQVWPHRAHTPR*HHCAET
Trigger: TGTCTCAGCACAGTGATGGCATCGTGGAGTATGGGC...CCTATGAGGCCAGACTTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR-3UTR TCA 90 bp AAATCTTCCAGGGCTGACTACATTCTGGAGTTCCTTTACGAACAGCTTCTCCTCGGAAAGTCCTGGCCTTaGCTTCTTTGGCCCATACTC +
Preference number: 2 (lower is better)
Translates to: KSSRADYILEFLYEQLLLGKSWP*LLWPIL
Trigger: GAGTATGGGCCAAAGAAGTCAAGGCCAGGACTTTCC...GAGGAGAAGCTGTTCGTAAAGGAACTCCAGAATGTAGTCAGCCCTGGAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR CAA 90 bp GTAAACGCCTGTGCTTGGAATTGGCGGACATCTGTTTCTCTTGGCTaGCGCTGCCTTTTTCTCTCCAAGTGGAACTGTTTGTGTTTGTTA +
Preference number: 2 (lower is better)
Translates to: VNACAWNWRTSVSLG*RCLFLSKWNCLCLL
Trigger: TAACAAACACAAACAGTTCCACTTGGAGAGAAAAAGGCAGCGCAAGCCAAGAGAAACAGATGTCCGCCAATTCCAAGCACAGGCGTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR-3UTR GCA 90 bp TTCCTTCGAACCCCTCCTTCTTCAGTGGTAAATGATAATGCTAGCTCAGGTCCCAGGTTGAAGCTGCCCTaGACAGCTGATATGATTAGT +
Preference number: 2 (lower is better)
Translates to: FLRTPPSSVVNDNASSGPRLKLP*TADMIS
Trigger: ACTAATCATATCAGCTGTGCAGGGCAGCTTCAACCT...GGGACCTGAGCTAGCATTATCATTTACCACTGAAGAAGGAGGGGTTCGAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582724.1
3UTR-3UTR TCA 90 bp TGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAGCATCAACGTTGGCTCTATGGAGGGTaGCAACATGAGTCACAAAAT +
Preference number: 2 (lower is better)
Translates to: CRSRAIKSMLFALSQHQRWLYGG*QHESQN
Trigger: ATTTTGTGACTCATGTTGTCACCCTCCATAGAGCCA...ACGTTGATGCTGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583676.1
3UTR CAA 90 bp CCTCCTTCTTCAGTGGTAAATGATAATGCTAGCTCAGGTCCCAGGTaGAAGCTGCCCTGCACAGCTGATATGATTAGTGATAATAAAGAT +
Preference number: 2 (lower is better)
Translates to: PPSSVVNDNASSGPR*KLPCTADMISDNKD
Trigger: ATCTTTATTATCACTAATCATATCAGCTGTGCAGGGCAGCTTCAACCTGGGACCTGAGCTAGCATTATCATTTACCACTGAAGAAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582724.1
3UTR-3UTR TCA 90 bp AAATGCTTCAGTAAACGCCTGTGCTTGGAATTGGCGGACATCTGTTTCTCTTGGGTTTCACTTTTCTCATaGGATGTTTCACTGATGCGT +
Preference number: 2 (lower is better)
Translates to: KCFSKRLCLELADICFSWVSLFS*DVSLMR
Trigger: ACGCATCAGTGAAACATCTCATGAGAAAAGTGAAAC...CCAAGAGAAACAGATGTCCGCCAATTCCAAGCACAGGCGTTTACTGAAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR-3UTR GCA 90 bp TGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAGCATCAACGTAAGTTCAAGAACACATaGCATCCTGAGTTGATGCCT +
Preference number: 2 (lower is better)
Translates to: CRSRAIKSMLFALSQHQRKFKNT*HPELMP
Trigger: AGGCATCAACTCAGGATGGCATGTGTTCTTGAACTT...ACGTTGATGCTGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583676.1
3UTR CAA 90 bp CAGTCCTTGAAGTCTTGCAGTCTCTTGTTATGTTCATATTCTTTCTaGACAAGGGTAGTAAGGAGGTCATGCCTTCTTAGGGCTTCTTCT +
Preference number: 2 (lower is better)
Translates to: QSLKSCSLLLCSYSF*TRVVRRSCLLRASS
Trigger: AGAAGAAGCCCTAAGAAGGCATGACCTCCTTACTACCCTTGTCAAGAAAGAATATGAACATAACAAGAGACTGCAAGACTTCAAGGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR-3UTR CCA 90 bp AGTCTCTTGTTATGTTCATATTCTTTCTTGACAAGGGTAGTAAGGAGGTCATGCATGGGATCTGTAGGGTaGCTTTCTACGCATGGAAAG +
Preference number: 2 (lower is better)
Translates to: SLLLCSYSFLTRVVRRSCMGSVG*LSTHGK
Trigger: CTTTCCATGCGTAGAAAGCCACCCTACAGATCCCAT...GCATGACCTCCTTACTACCCTTGTCAAGAAAGAATATGAACATAACAAGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR CAA 90 bp CTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTaGGACAAAACACTAGGAGGGTACAACATATCTTCATGTGATTTA +
Preference number: 2 (lower is better)
Translates to: LTERVSVSSTKDVLL*DKTLGGYNISSCDL
Trigger: TAAATCACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553956.6
ENST00000577960.1
ENST00000579860.5
3UTR-3UTR CCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACACAGTTTCCAACCAGCTaGAACAATAAGAATTTGAAA +
Preference number: 2 (lower is better)
Translates to: VQAKDTNAPILPVDASVTQFPTS*NNKNLK
Trigger: TTTCAAATTCTTATTGTTCCAGCTGGTTGGAAACTG...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
3UTR-3UTR CCA 90 bp ACTGAACTCTATAATCATCATAATATTTTCGAGCACGAACGATTTGCTGTCGATTTTGTTAACTGGAGATaGAGAGAGCGAATGGGATCT +
Preference number: 2 (lower is better)
Translates to: TELYNHHNIFEHERFAVDFVNWR*RERMGS
Trigger: AGATCCCATTCGCTCTCTCCATCTCCAGTTAACAAA...ATCGACAGCAAATCGTTCGTGCTCGAAAATATTATGATGATTATAGAGTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR-3UTR CAA 90 bp TATAGTGAGAGGAAGAACCCAGCACTGAACCCATGGTCTTCCTTCGAACCCCTCAGCTCAGGTCCCAGGTaGAAGCTGCCCTGCACAGCT +
Preference number: 3 (lower is better)
Translates to: YSERKNPALNPWSSFEPLSSGPR*KLPCTA
Trigger: AGCTGTGCAGGGCAGCTTCAACCTGGGACCTGAGCT...GAGGGGTTCGAAGGAAGACCATGGGTTCAGTGCTGGGTTCTTCCTCTCACTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582724.1
3UTR GCA 72 bp GTCCTGGCCTTGACTTCTTTGGCCCATACTCCACGATaGCATCACTGTGCTGAGACAGTGTCTCCTCAGTTC +
Preference number: 3 (lower is better)
Translates to: VLALTSLAHTPR*HHCAETVSPQF
Trigger: GAACTGAGGAGACACTGTCTCAGCACAGTGATGGCATCGTGGAGTATGGGCCAAAGAAGTCAAGGCCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR CCA 72 bp GGGAGCAGTGACTTGAATGCAAGTATTCTTTTCCTATaGGGCAGGGTGCTCGAGGCTCTGAAGGGTGGTAGG +
Preference number: 3 (lower is better)
Translates to: GSSDLNASILFL*GRVLEALKGGR
Trigger: CCTACCACCCTTCAGAGCCTCGAGCACCCTGCCCCATAGGAAAAGAATACTTGCATTCAAGTCACTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
3UTR TCA 72 bp TTCTTTGGCCCATACTCCACGATGCCATCACTGTGCTaGGACAGTGTCTCCTCAGTTCCATCCTCTACCTCC +
Preference number: 3 (lower is better)
Translates to: FFGPYSTMPSLC*DSVSSVPSSTS
Trigger: GGAGGTAGAGGATGGAACTGAGGAGACACTGTCTCAGCACAGTGATGGCATCGTGGAGTATGGGCCAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR-3UTR CAA 90 bp AAATCTTCCAGGGCTGACTACATTCTGGAGTTCCTTTACGAACAGCTTCTCCTCCTGGCCTTGACTTCTTaGGCCCATACTCCACGATGC +
Preference number: 3 (lower is better)
Translates to: KSSRADYILEFLYEQLLLLALTS*AHTPRC
Trigger: GCATCGTGGAGTATGGGCCAAAGAAGTCAAGGCCAG...GAGGAGAAGCTGTTCGTAAAGGAACTCCAGAATGTAGTCAGCCCTGGAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR-3UTR CAA 90 bp GGAAACTGCTCCAGCATAAGGGGCAGGAGACTGTGTTCACTTACTTTCATTGGACGCCTGTGCTTGGAATaGGCGGACATCTGTTTCTCT +
Preference number: 3 (lower is better)
Translates to: GNCSSIRGRRLCSLTFIGRLCLE*ADICFS
Trigger: AGAGAAACAGATGTCCGCCAATTCCAAGCACAGGCG...TCCAATGAAAGTAAGTGAACACAGTCTCCTGCCCCTTATGCTGGAGCAGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR-3UTR CAA 90 bp CCAGAACCTTCACCTACTATTATCAAGTCTGGCCTCATAGGGAGGGACTTTTACCTGTTAATCTCTTTCTaGGCCTCTGGGGGAAAGGTG +
Preference number: 3 (lower is better)
Translates to: PEPSPTIIKSGLIGRDFYLLISF*ASGGKV
Trigger: CACCTTTCCCCCAGAGGCCAAGAAAGAGATTAACAG...GTAAAAGTCCCTCCCTATGAGGCCAGACTTGATAATAGTAGGTGAAGGTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR CCA 72 bp CCAGCAATGAAAACTGGTCCTTATAGTAGTTCTCCATaGAGTCCAGTTCATCCTGGTGGCGTCTCCTTTGTT +
Preference number: 3 (lower is better)
Translates to: PAMKTGPYSSSP*SPVHPGGVSFV
Trigger: AACAAAGGAGACGCCACCAGGATGAACTGGACTCCATGGAGAACTACTATAAGGACCAGTTTTCATTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR CCA 72 bp TGTAATTCTTGTTCTGTTAATCTCTTTCTTGGCCTCTaGGGGAAAGGTGAATTGCAGGATGAGGCTGTAGCT +
Preference number: 3 (lower is better)
Translates to: CNSCSVNLFLGL*GKGELQDEAVA
Trigger: AGCTACAGCCTCATCCTGCAATTCACCTTTCCCCCAGAGGCCAAGAAAGAGATTAACAGAACAAGAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR-3UTR CAA 90 bp CCAGAACCTTCACCTACTATTATCAAGTCTGGCCTCATAGGGAGGGACTTTTACTTCAACCTGTGCAATTaGCTGTTTCCACATTTTGCT +
Preference number: 3 (lower is better)
Translates to: PEPSPTIIKSGLIGRDFYFNLCN*LFPHFA
Trigger: AGCAAAATGTGGAAACAGCAAATTGCACAGGTTGAA...GTAAAAGTCCCTCCCTATGAGGCCAGACTTGATAATAGTAGGTGAAGGTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR CCA 72 bp CGAACGATTTGCTGTCGATTTTCTTTTATCTTTGATTaGGTCAACCTTTGCCTACGAATGCAGTCCTTGAAG +
Preference number: 3 (lower is better)
Translates to: RTICCRFSFIFD*VNLCLRMQSLK
Trigger: CTTCAAGGACTGCATTCGTAGGCAAAGGTTGACCCAATCAAAGATAAAAGAAAATCGACAGCAAATCGTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR GCA 72 bp TCATATTCTTTCTTGACAAGGGTAGTAAGGAGGTCATaGCTTCTTAGGGCTTCTTCTATTTCATCTTGGAGT +
Preference number: 3 (lower is better)
Translates to: SYSFLTRVVRRS*LLRASSISSWS
Trigger: ACTCCAAGATGAAATAGAAGAAGCCCTAAGAAGGCATGACCTCCTTACTACCCTTGTCAAGAAAGAATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR-3UTR CAA 90 bp TTTCTTAAATATCATTTCTTCCCGGGTCCTCATTCTCATCATTTTTGCACACAAGGATATACTTCCCATTaGCTGCCTTTAGGCAACTTG +
Preference number: 3 (lower is better)
Translates to: FLKYHFFPGPHSHHFCTQGYTSH*LPLGNL
Trigger: CAAGTTGCCTAAAGGCAGCAAATGGGAAGTATATCC...TTGTGTGCAAAAATGATGAGAATGAGGACCCGGGAAGAAATGATATTTAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR GCA 72 bp CCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTaGACTGTCACAGCATCAACGTTTTTAAAGAATATT +
Preference number: 3 (lower is better)
Translates to: PMPKSSNKINAV*TVTASTFLKNI
Trigger: AATATTCTTTAAAAACGTTGATGCTGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583676.1
3UTR GCA 72 bp AAATATCTGAAATATTTAGGCTGTCACAAATGTAAGTaGAGGCTAAAGACACAAATGCACCAATTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: KYLKYLGCHKCK*RLKTQMHQFFL
Trigger: CAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCACTTACATTTGTGACAGCCTAAATATTTCAGATATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR TCA 90 bp GGCTCCCCTAGCTTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGGGGTGCTCGAGGCTCTaGAGGGTGGTAGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: GSPSFLAFGIPLTERVSVGCSRL*RVVGWM
Trigger: CATCCACCCTACCACCCTTCAGAGCCTCGAGCACCC...CACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAAGCTAGGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
CDS-3UTR CCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATACGCAGACCCGACACTaGGGCGCGGACGCACGAACC +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYTQTRH*GADART
Trigger: GGTTCGTGCGTCCGCGCCCCAGTGTCGGGTCTGCGT...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556440.7
CDS-3UTR TCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACGGGTGCTCGAGGCTCTaGAGGGTGGTAGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYGCSRL*RVVGWM
Trigger: CATCCACCCTACCACCCTTCAGAGCCTCGAGCACCC...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATGGGTGCTCGAGGCTCTaGAGGGTGGTAGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYGCSRL*RVVGWM
Trigger: CATCCACCCTACCACCCTTCAGAGCCTCGAGCACCC...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp GCTTCATCTCCATCCCAAGAGGGGCCCAACATCTCAGAAGACAAGGAGCACCTCGCTGAAGCCGAGATCTaGAGCGCTCAGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ASSPSQEGPNISEDKEHLAEAEI*SAQLPV
Trigger: AACTGGAAGCTGAGCGCTTCAGATCTCGGCTTCAGC...GAGGTGCTCCTTGTCTTCTGAGATGTTGGGCCCCTCTTGGGATGGAGATGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp CTTCGAACCCCTCCTTCTTCAGTGGTAAATGATAATGCTAGCTCAGGTCCCAGGGCTCAGGTCCCAGGTTaGAGCTGCCCTGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LRTPPSSVVNDNASSGPRAQVPG*SCPAQL
Trigger: CAGCTGTGCAGGGCAGCTTCAACCTGGGACCTGAGC...CCTGGGACCTGAGCTAGCATTATCATTTACCACTGAAGAAGGAGGGGTTCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582724.1
CDS-3UTR GCA 90 bp AGTATTCTTTTCCTATGGGGCAGGGTGCTCGAGGCTCTGAAGGGTGGTAGGGTGGCCCATACTCCACGATaGCATCACTGTGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: SILFLWGRVLEALKGGRVAHTPR*HHCAET
Trigger: TGTCTCAGCACAGTGATGGCATCGTGGAGTATGGGC...CACCCTACCACCCTTCAGAGCCTCGAGCACCCTGCCCCATAGGAAAAGAATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCAAGGCGACGGTGTCCTaGAAGGACCGATCCACGCAG +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFKATVS*KDRSTQ
Trigger: CTGCGTGGATCGGTCCTTCCAGGACACCGTCGCCTT...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556440.7
CDS-3UTR TCA 90 bp AAATCTTCCAGGGCTGACTACATTCTGGAGTTCCTTTACGAACAGCTTCTCCTCGGGTGCTCGAGGCTCTaGAGGGTGGTAGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: KSSRADYILEFLYEQLLLGCSRL*RVVGWM
Trigger: CATCCACCCTACCACCCTTCAGAGCCTCGAGCACCC...GAGGAGAAGCTGTTCGTAAAGGAACTCCAGAATGTAGTCAGCCCTGGAAGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCGCTGAAGCCGAGATCTaGAGCGCTCAGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTAEAEI*SAQLPV
Trigger: AACTGGAAGCTGAGCGCTTCAGATCTCGGCTTCAGC...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACCTCAGCATCCGAGCCTaGCATGTTTCAGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYLSIRA*HVSEAG
Trigger: ACCTGCCTCTGAAACATGGCAGGCTCGGATGCTGAG...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553412.5
ENST00000556440.7
CDS-3UTR TCA 90 bp GGCTCCCCTAGCTTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGACGGCTGGGGAGCAGTaGCTTGAATGCAAGTATTCT +
Preference number: 4 (lower is better)
Translates to: GSPSFLAFGIPLTERVSVTAGEQ*LECKYS
Trigger: AGAATACTTGCATTCAAGTCACTGCTCCCCAGCCGT...CACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAAGCTAGGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
CDS-3UTR TCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCGCTGAAGCCGAGATCTaGAGCGCTCAGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFAEAEI*SAQLPV
Trigger: AACTGGAAGCTGAGCGCTTCAGATCTCGGCTTCAGC...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCGCCCATACTCCACGATaGCATCACTGTGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTAHTPR*HHCAET
Trigger: TGTCTCAGCACAGTGATGGCATCGTGGAGTATGGGC...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp TATGTGCCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAGCAGAGCAGGGAAGGTaGCCGTTTTCTCCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: YVPMPKSSNKINAVCTVTAEQGR*PFSPAV
Trigger: CACGGCCGGAGAAAACGGGCACCTTCCCTGCTCTGC...TGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGGCACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR TCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACACGGCTGGGGAGCAGTaGCTTGAATGCAAGTATTCT +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYTAGEQ*LECKYS
Trigger: AGAATACTTGCATTCAAGTCACTGCTCCCCAGCCGT...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCATGCCATCACTGTGCTaGGACAGTGTCTCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTMPSLC*DSVSSV
Trigger: AACTGAGGAGACACTGTCTCAGCACAGTGATGGCAT...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTTGGGAGGCCACCTCTaGCTCTGCGTTGTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYLGGHL*LCVVVF
Trigger: AAAAACCACAACGCAGAGTCAGAGGTGGCCTCCCAA...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553412.5
CDS-3UTR GCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATGCCCATACTCCACGATaGCATCACTGTGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYAHTPR*HHCAET
Trigger: TGTCTCAGCACAGTGATGGCATCGTGGAGTATGGGC...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp GTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTGATTTAACGCAGACCCGACACTaGGGCGCGGACGCACGAACC +
Preference number: 4 (lower is better)
Translates to: VLLLDKTLGGYNISSCDLTQTRH*GADART
Trigger: GGTTCGTGCGTCCGCGCCCCAGTGTCGGGTCTGCGT...TAAATCACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS-3UTR CCA 90 bp AGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTAAGGCGACGGTGTCCTaGAAGGACCGATCCACGCAG +
Preference number: 4 (lower is better)
Translates to: SIWNPTHRKGFRVFNKGCKATVS*KDRSTQ
Trigger: CTGCGTGGATCGGTCCTTCCAGGACACCGTCGCCTT...ACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS-3UTR CCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACAAAGGCGACGGTGTCCTaGAAGGACCGATCCACGCAG +
Preference number: 4 (lower is better)
Translates to: VQAKDTNAPILPVDASVTKATVS*KDRSTQ
Trigger: CTGCGTGGATCGGTCCTTCCAGGACACCGTCGCCTT...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR CCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCCTCTTTCTTGGCCTCTaGGGGAAAGGTGAATTGCAG +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTLFLGL*GKGELQ
Trigger: CTGCAATTCACCTTTCCCCCAGAGGCCAAGAAAGAG...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp CAGTGGATTCTGCTTCATCTCCATCCCAAGAGGGGCCCAACATCTCAGAAGACAGTGGCTTTCTACGCATaGAAAGTCCTGGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: QWILLHLHPKRGPTSQKTVAFYA*KVLALT
Trigger: AGTCAAGGCCAGGACTTTCCATGCGTAGAAAGCCAC...TGTCTTCTGAGATGTTGGGCCCCTCTTGGGATGGAGATGAAGCAGAATCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp CCAGTGGATTCTGCTTCATCTCCATCCCAAGAGGGGCCCAACATCTCAGAAGACATGGGATCTGTAGGGTaGCTTTCTACGCATGGAAAG +
Preference number: 4 (lower is better)
Translates to: PVDSASSPSQEGPNISEDMGSVG*LSTHGK
Trigger: CTTTCCATGCGTAGAAAGCCACCCTACAGATCCCAT...GTCTTCTGAGATGTTGGGCCCCTCTTGGGATGGAGATGAAGCAGAATCCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACGAGTCCAGTTCATCCTaGTGGCGTCTCCTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYESSSS*WRLLCS
Trigger: TGAACAAAGGAGACGCCACCAGGATGAACTGGACTC...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
3UTR CAA 72 bp ACGCCTGTGCTTGGAATTGGCGGACATCTGTTTCTCTaGGCTTGCGCTGCCTTTTTCTCTCCAAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: TPVLGIGGHLFL*ACAAFFSPSGT
Trigger: AGTTCCACTTGGAGAGAAAAAGGCAGCGCAAGCCAAGAGAAACAGATGTCCGCCAATTCCAAGCACAGGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp CCAGTGGATTCTGCTTCATCTCCATCCCAAGAGGGGCCCAACATCTCAGAAGACGGCTTCTGCCAGCAATaGAAACTGGTCCTTATAGTA +
Preference number: 4 (lower is better)
Translates to: PVDSASSPSQEGPNISEDGFCQQ*KLVLIV
Trigger: TACTATAAGGACCAGTTTTCATTGCTGGCAGAAGCC...GTCTTCTGAGATGTTGGGCCCCTCTTGGGATGGAGATGAAGCAGAATCCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp CAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACAAAACACTCCTTTCACAGGACGTaGAACGGGGGCGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: QKGFPCLQQRMSYSWTKHSFHRT*NGGGLG
Trigger: TCCCAAACCGCCCCCGTTTCACGTCCTGTGAAAGGA...GTGTTTTGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS-3UTR TCA 90 bp CACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACAAGAGCTTCTCGCCGCTaGTTGGTCATCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HSQKGFPCLQQRMSYSWTRASRR*LVIRGA
Trigger: TGCTCCTCTGATGACCAATCAGCGGCGAGAAGCTCT...TGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS-3UTR GCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACGATTGGGTCAACCTTTaGCTACGAATGCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYDWVNL*LRMQSL
Trigger: CAAGGACTGCATTCGTAGGCAAAGGTTGACCCAATC...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCGAAGGTTATTGGCAATaGTTACCCACTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTEGYWQ*LPTQHP
Trigger: CGGATGCTGAGTGGGTAACCATTGCCAATAACCTTC...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATAGTATTCTTTTCCTATaGGGCAGGGTGCTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYSILFL*GRVLEA
Trigger: AGCCTCGAGCACCCTGCCCCATAGGAAAAGAATACT...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCAGTATTCTTTTCCTATaGGGCAGGGTGCTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFSILFL*GRVLEA
Trigger: AGCCTCGAGCACCCTGCCCCATAGGAAAAGAATACT...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCCCCTTGGACCTGAGCTaGATATACTTCCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTPLDLS*IYFPFA
Trigger: AGCAAATGGGAAGTATATCCAGCTCAGGTCCAAGGG...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCCTCTTTCTTGGCCTCTaGGGGAAAGGTGAATTGCAG +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFLFLGL*GKGELQ
Trigger: CTGCAATTCACCTTTCCCCCAGAGGCCAAGAAAGAG...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATGTGGCTTTCTACGCATaGAAAGTCCTGGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYVAFYA*KVLALT
Trigger: AGTCAAGGCCAGGACTTTCCATGCGTAGAAAGCCAC...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCGTGGCTTTCTACGCATaGAAAGTCCTGGCCTTGACT +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFVAFYA*KVLALT
Trigger: AGTCAAGGCCAGGACTTTCCATGCGTAGAAAGCCAC...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACGCCTGTGCTTGGAATTaGCGGACATCTGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYACAWN*RTSVSL
Trigger: AAGAGAAACAGATGTCCGCCAATTCCAAGCACAGGC...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACGGGCTGACTACATTCTaGAGTTCCTTTACGAACAGC +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYGLTTF*SSFTNS
Trigger: GCTGTTCGTAAAGGAACTCCAGAATGTAGTCAGCCC...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTGGAACTGCTTTATTTaGCTTTGGGAGGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYWNCFI*LWEATS
Trigger: AGAGGTGGCCTCCCAAAGCCAAATAAAGCAGTTCCA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTCCAGTTCATCCTGGTaGCGTCTCCTTTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTSSSSW*RLLCSS
Trigger: AGATGAACAAAGGAGACGCCACCAGGATGAACTGGA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTCCAGTTCATCCTGGTaGCGTCTCCTTTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYSSSSW*RLLCSS
Trigger: AGATGAACAAAGGAGACGCCACCAGGATGAACTGGA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATGAGTCCAGTTCATCCTaGTGGCGTCTCCTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYESSSS*WRLLCS
Trigger: TGAACAAAGGAGACGCCACCAGGATGAACTGGACTC...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTTATGTGAGACAAGCTaGCCTGCAAGTAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYLCETS*PASSPR
Trigger: CCTTGGACTACTTGCAGGTCAGCTTGTCTCACATAA...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCTTATGTGAGACAAGCTaGCCTGCAAGTAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFLCETS*PASSPR
Trigger: CCTTGGACTACTTGCAGGTCAGCTTGTCTCACATAA...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTGGGGAGCAGTGACTTaGATGCAAGTATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTWGAVT*MQVFFS
Trigger: GGAAAAGAATACTTGCATTCAAGTCACTGCTCCCCA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTACGAATGCAGTCCTTaGAGTCTTGCAGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYYECSP*SLAVSC
Trigger: ACAAGAGACTGCAAGACTTCAAGGACTGCATTCGTA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTTCTTGATGTTCCTGTaGTATGGCTTCTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTFLMFL*YGFCQQ
Trigger: TTGCTGGCAGAAGCCATATCACAGGAACATCAAGAA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTTCTTGATGTTCCTGTaGTATGGCTTCTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYFLMFL*YGFCQQ
Trigger: TTGCTGGCAGAAGCCATATCACAGGAACATCAAGAA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATAGAGCTGTTATGTaGGACAAGCTGACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYYRAVM*DKLTCK
Trigger: CTTGCAGGTCAGCTTGTCTCACATAACAGCTCTATA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553412.5
ENST00000553956.6
CDS-3UTR TCA 90 bp TTGCTGCCTTTAGGCAACTTGGAAATTAAGAAAAGTCCATCATCTAGATCCCCAAGCCGCTTGAGAGGCTaGGGCAGAGGTTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LLPLGNLEIKKSPSSRSPSRLRG*GRGCSE
Trigger: CTCACTGCAACCTCTGCCTCAGCCTCTCAAGCGGCT...TGGGGATCTAGATGATGGACTTTTCTTAATTTCCAAGTTGCCTAAAGGCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577960.1
CDS-3UTR GCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAACTCAGCATCCGAGCCTaGCATGTTTCAGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQLSIRA*HVSEAG
Trigger: ACCTGCCTCTGAAACATGGCAGGCTCGGATGCTGAG...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553412.5
ENST00000556440.7
CDS-3UTR GCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACACTCAGCATCCGAGCCTaGCATGTTTCAGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VQAKDTNAPILPVDASVTLSIRA*HVSEAG
Trigger: ACCTGCCTCTGAAACATGGCAGGCTCGGATGCTGAG...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR GCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTTCACCAGTGGATTCTaGTTCATCTCCATCCCAAGA +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYFTSGF*FISIPR
Trigger: TCTTGGGATGGAGATGAAGCAGAATCCACTGGTGAA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTTCACCAGTGGATTCTaGTTCATCTCCATCCCAAGA +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTFTSGF*FISIPR
Trigger: TCTTGGGATGGAGATGAAGCAGAATCCACTGGTGAA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCGATTGGGTCAACCTTTaGCTACGAATGCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFDWVNL*LRMQSL
Trigger: CAAGGACTGCATTCGTAGGCAAAGGTTGACCCAATC...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp GTGGTAAATGATAATGCTAGCTCAGGTCCCAGGTTGAAGCTGCCCTGCACAGCTAGGTTGAAGCTGCCCTaGACAGCTGATATGATTAGT +
Preference number: 4 (lower is better)
Translates to: VVNDNASSGPRLKLPCTARLKLP*TADMIS
Trigger: ACTAATCATATCAGCTGTGCAGGGCAGCTTCAACCT...AGCTGTGCAGGGCAGCTTCAACCTGGGACCTGAGCTAGCATTATCATTTACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582724.1
CDS-3UTR CCA 90 bp CCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACAGTATTCTTTTCCTATaGGGCAGGGTGCTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLTERVSVSSTKDVLLLDSILFL*GRVLEA
Trigger: AGCCTCGAGCACCCTGCCCCATAGGAAAAGAATACT...GTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
CDS-3UTR CCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCATGGGATCTGTAGGGTaGCTTTCTACGCATGGAAAG +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFMGSVG*LSTHGK
Trigger: CTTTCCATGCGTAGAAAGCCACCCTACAGATCCCAT...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACGACATCTGTTTCTCTTaGCTTGCGCTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYDICFS*LALPFS
Trigger: AGAAAAAGGCAGCGCAAGCCAAGAGAAACAGATGTC...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCGTAAACGCCTGTGCTTaGAATTGGCGGACATCTGTT +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFVNACA*NWRTSV
Trigger: AACAGATGTCCGCCAATTCCAAGCACAGGCGTTTAC...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATGTAAACGCCTGTGCTTaGAATTGGCGGACATCTGTT +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYVNACA*NWRTSV
Trigger: AACAGATGTCCGCCAATTCCAAGCACAGGCGTTTAC...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCTGGAACTGCTTTATTTaGCTTTGGGAGGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFWNCFI*LWEATS
Trigger: AGAGGTGGCCTCCCAAAGCCAAATAAAGCAGTTCCA...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCGGGCTGACTACATTCTaGAGTTCCTTTACGAAGCTT +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTGLTTF*SSFTKL
Trigger: AAGCTTCGTAAAGGAACTCCAGAATGTAGTCAGCCC...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553412.5
3UTR CAA 72 bp TGTGCTTGGAATTGGCGGACATCTGTTTCTCTTGGCTaGCGCTGCCTTTTTCTCTCCAAGTGGAACTGTTTG +
Preference number: 4 (lower is better)
Translates to: CAWNWRTSVSLG*RCLFLSKWNCL
Trigger: CAAACAGTTCCACTTGGAGAGAAAAAGGCAGCGCAAGCCAAGAGAAACAGATGTCCGCCAATTCCAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp TGGCCCATACTCCACGATGCCATCACTGTGCTGAGACAGTGTCTCCTCAGTTCCTTAGCATCACAGTCTTaGAGTTCATGTATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: WPILHDAITVLRQCLLSSLASQS*SSCILR
Trigger: TCTGAGAATACATGAACTTCAAGACTGTGATGCTAA...GGAACTGAGGAGACACTGTCTCAGCACAGTGATGGCATCGTGGAGTATGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCGTAGTCCAAGGCCAGTaGATCAATTACTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFVVQGQ*INYCLY
Trigger: GTACAAGCAGTAATTGATTCACTGGCCTTGGACTAC...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTTTTCTCCTGTTATGTaGGACAAGCTGACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYFSPVM*DKLTCK
Trigger: CTTGCAGGTCAGCTTGTCTCACATAACAGGAGAAAA...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556440.7
CDS-3UTR TCA 90 bp CCTTCTTCAGTGGTAAATGATAATGCTAGCTCAGGTCCCAGGTTGAAGCTGCCCTTTTCTCCTGTTATGTaGGACAAGCTGACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PSSVVNDNASSGPRLKLPFSPVM*DKLTCK
Trigger: CTTGCAGGTCAGCTTGTCTCACATAACAGGAGAAAA...GGGCAGCTTCAACCTGGGACCTGAGCTAGCATTATCATTTACCACTGAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582724.1
CDS-3UTR TCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCAGTTCAGAAAGCCGCTaGGAGAGTTTTTCTGATACA +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTSSESR*ESFSDT
Trigger: TGTATCAGAAAAACTCTCTCAGCGGCTTTCTGAACT...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACAGTTCAGAAAGCCGCTaGGAGAGTTTTTCTGATACA +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYSSESR*ESFSDT
Trigger: TGTATCAGAAAAACTCTCTCAGCGGCTTTCTGAACT...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAAGGAAAGTCCTGGCCTTaGCTTCTTTGGCCCATACTC +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQGKSWP*LLWPIL
Trigger: GAGTATGGGCCAAAGAAGTCAAGGCCAGGACTTTCC...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCTACGAATGCAGTCCTTaGAGTCTTGCAGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFYECSP*SLAVSC
Trigger: ACAAGAGACTGCAAGACTTCAAGGACTGCATTCGTA...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCGGCTTCTGCCAGCAATaGAAACTGGTCCTTATAGTA +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFGFCQQ*KLVLIV
Trigger: TACTATAAGGACCAGTTTTCATTGCTGGCAGAAGCC...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATGGCTTCTGCCAGCAATaGAAACTGGTCCTTATAGTA +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYGFCQQ*KLVLIV
Trigger: TACTATAAGGACCAGTTTTCATTGCTGGCAGAAGCC...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp TGCCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAGCATCATGCCATCCTGAGTTaGTGCCTCTGTCATGTTGCA +
Preference number: 4 (lower is better)
Translates to: CPCRSRAIKSMLFALSQHHAILS*CLCHVA
Trigger: TGCAACATGACAGAGGCATCAACTCAGGATGGCATG...ATGCTGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR GCA 90 bp TCCCCTAGCTTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTTCACCAGTGGATTCTaGTTCATCTCCATCCCAAGA +
Preference number: 4 (lower is better)
Translates to: SPSFLAFGIPLTERVSVSFTSGF*FISIPR
Trigger: TCTTGGGATGGAGATGAAGCAGAATCCACTGGTGAA...AGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAAGCTAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553956.6
ENST00000577960.1
ENST00000579860.5
CDS-3UTR CCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTTTGTTAACTGGAGATaGAGAGAGCGAATGGGATCT +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTFVNWR*RERMGS
Trigger: AGATCCCATTCGCTCTCTCCATCTCCAGTTAACAAA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCGACATCTGTTTCTCTTaGCTTGCGCTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFDICFS*LALPFS
Trigger: AGAAAAAGGCAGCGCAAGCCAAGAGAAACAGATGTC...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp CTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAAGTCTGGCCTCATAGGGGGCTGACTACATTCTaGAGTTCCTTTACGAACAGC +
Preference number: 4 (lower is better)
Translates to: LVKASRTFTYYYQVWPHRGLTTF*SSFTNS
Trigger: GCTGTTCGTAAAGGAACTCCAGAATGTAGTCAGCCC...CCTATGAGGCCAGACTTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATAGTAGTTCTCCATaGAGTCCAGTTCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYYSSSP*SPVHPG
Trigger: ACCAGGATGAACTGGACTCCATGGAGAACTACTATA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCGATGTTCCTGTGATATaGCTTCTGCCAGCAATGAAA +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTDVPVI*LLPAMK
Trigger: TTTCATTGCTGGCAGAAGCCATATCACAGGAACATC...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp CAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACAAAACACCTTCTCGCCGCTGATTaGTCATCAGAGGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: QKGFPCLQQRMSYSWTKHLLAAD*SSEEHF
Trigger: GAAGTGCTCCTCTGATGACCAATCAGCGGCGAGAAG...GTGTTTTGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS-3UTR TCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTGTGCATCATCTTCTTaGCTCCTAGGAATAACTATG +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYCASSS*LLGITM
Trigger: CATAGTTATTCCTAGGAGTCAAGAAGATGATGCACA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp CCTAGCTTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCATGGGGAGCAGTGACTTaGATGCAAGTATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSFLAFGIPLTERVSVSSWGAVT*MQVFFS
Trigger: GGAAAAGAATACTTGCATTCAAGTCACTGCTCCCCA...TGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAAGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
CDS-3UTR TCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAAATGCCATCACTGTGCTaGGACAGTGTCTCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQMPSLC*DSVSSV
Trigger: AACTGAGGAGACACTGTCTCAGCACAGTGATGGCAT...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATCTGGCTTTAAGTTCTTaGTGTTCCTGTGATATGGCT +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYLALSS*CSCDMA
Trigger: AGCCATATCACAGGAACATCAAGAACTTAAAGCCAG...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCCTGGCTTTAAGTTCTTaGTGTTCCTGTGATATGGCT +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFLALSS*CSCDMA
Trigger: AGCCATATCACAGGAACATCAAGAACTTAAAGCCAG...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTGCTTGTACATTGTGTaGATCATCTTCTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYCLYIV*IIFLTP
Trigger: AGGAGTCAAGAAGATGATGCACACAATGTACAAGCA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp CCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACTTCACCAGTGGATTCTaGTTCATCTCCATCCCAAGA +
Preference number: 4 (lower is better)
Translates to: PLTERVSVSSTKDVLLLDFTSGF*FISIPR
Trigger: TCTTGGGATGGAGATGAAGCAGAATCCACTGGTGAA...GTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553956.6
ENST00000577960.1
ENST00000579860.5
CDS-3UTR GCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACCCAGAAAATTCCGTATaGTCTCCAGTAGAATTTACG +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYPENSV*SPVEFT
Trigger: CGTAAATTCTACTGGAGAGCATACGGAATTTTCTGG...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCCAGTCCTTGAAGTCTTaGAGTCTCTTGTTATGTTCA +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTQSLKS*SLLLCS
Trigger: TGAACATAACAAGAGACTGCAAGACTTCAAGGACTG...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp TTTATGGTTGGCTCTATGGAGGGTGACAACATGAGTCACAAAATGAAAAGTTCATCCGGCCGTGGTGACTaGTCAGTTGGTAGTACCTGG +
Preference number: 4 (lower is better)
Translates to: FMVGSMEGDNMSHKMKSSSGRGD*SVGSTW
Trigger: CCAGGTACTACCAACTGAGCAGTCACCACGGCCGGA...TGAACTTTTCATTTTGTGACTCATGTTGTCACCCTCCATAGAGCCAACCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR CCA 90 bp AAATGCTTCAGTAAACGCCTGTGCTTGGAATTGGCGGACATCTGTTTCTCTTGGGAAGGTTATTGGCAATaGTTACCCACTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: KCFSKRLCLELADICFSWEGYWQ*LPTQHP
Trigger: CGGATGCTGAGTGGGTAACCATTGCCAATAACCTTC...CCAAGAGAAACAGATGTCCGCCAATTCCAAGCACAGGCGTTTACTGAAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TGGCCCATACTCCACGATGCCATCACTGTGCTGAGACAGTGTCTCCTCAGTTCCAATAACTATGAGGTCTaGTACCTTTTCTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: WPILHDAITVLRQCLLSSNNYEV*YLFSQN
Trigger: ATTTTGGGAGAAAAGGTACCAGACCTCATAGTTATT...GGAACTGAGGAGACACTGTCTCAGCACAGTGATGGCATCGTGGAGTATGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTTTGTTAACTGGAGATaGAGAGAGCGAATGGGATCT +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYFVNWR*RERMGS
Trigger: AGATCCCATTCGCTCTCTCCATCTCCAGTTAACAAA...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTTTGTGTTTGTTAACTaGAGATGGAGAGAGCGAATG +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTFVFVN*RWRERM
Trigger: CATTCGCTCTCTCCATCTCCAGTTAACAAACACAAA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTTTGTGTTTGTTAACTaGAGATGGAGAGAGCGAATG +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYFVFVN*RWRERM
Trigger: CATTCGCTCTCTCCATCTCCAGTTAACAAACACAAA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCCATCTCGCTTTTCTTTaGCATAGTTTCTTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTHLAFL*HSFLGL
Trigger: GAGACCTAAGAAACTATGCCAAAGAAAAGCGAGATG...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp CACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACATCCAGTTCATCCTGGTaGCGTCTCCTTTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: HSQKGFPCLQQRMSYSWTSSSSW*RLLCSS
Trigger: AGATGAACAAAGGAGACGCCACCAGGATGAACTGGA...TGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAGCATCAACGTGAGTCCAGTTCATCCTaGTGGCGTCTCCTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: CRSRAIKSMLFALSQHQRESSSS*WRLLCS
Trigger: TGAACAAAGGAGACGCCACCAGGATGAACTGGACTC...ACGTTGATGCTGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR CCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCTATAGTAGTTCTCCATaGAGTCCAGTTCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFYSSSP*SPVHPG
Trigger: ACCAGGATGAACTGGACTCCATGGAGAACTACTATA...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATGATGTTCCTGTGATATaGCTTCTGCCAGCAATGAAA +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYDVPVI*LLPAMK
Trigger: TTTCATTGCTGGCAGAAGCCATATCACAGGAACATC...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTACTATTATCAAGTCTaGCCTCATAGGGAGGGACTT +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYYYYQV*PHREGL
Trigger: AAGTCCCTCCCTATGAGGCCAGACTTGATAATAGTA...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTTAGCATCACAGTCTTaGAGTTCATGTATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTLASQS*SSCILR
Trigger: TCTGAGAATACATGAACTTCAAGACTGTGATGCTAA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACATTATGTGAGACAAGCTaGCCTGCAAGTAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: VQAKDTNAPILPVDASVTLCETS*PASSPR
Trigger: CCTTGGACTACTTGCAGGTCAGCTTGTCTCACATAA...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR TCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCGTTTCACTTTTCTCATaGGATGTTTCACTGATGCGT +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFVSLFS*DVSLMR
Trigger: ACGCATCAGTGAAACATCTCATGAGAAAAGTGAAAC...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp ACAAAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCAGGAAAGTCCTGGCCTTaGCTTCTTTGGCCCATACTC +
Preference number: 4 (lower is better)
Translates to: TKDVLLLDKTLGGYNISSGKSWP*LLWPIL
Trigger: GAGTATGGGCCAAAGAAGTCAAGGCCAGGACTTTCC...TGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp TGCCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAGCATTTCTTGATGTTCCTGTaGTATGGCTTCTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: CPCRSRAIKSMLFALSQHFLMFL*YGFCQQ
Trigger: TTGCTGGCAGAAGCCATATCACAGGAACATCAAGAA...ATGCTGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR TCA 90 bp CTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAAGTCTGGCCTCATAGGCTGGCTTTAAGTTCTTaGTGTTCCTGTGATATGGCT +
Preference number: 4 (lower is better)
Translates to: LVKASRTFTYYYQVWPHRLALSS*CSCDMA
Trigger: AGCCATATCACAGGAACATCAAGAACTTAAAGCCAG...CCTATGAGGCCAGACTTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp CCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATATAGAGCTGTTATGTaGGACAAGCTGACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PSIWNPTHRKGFRVFNKGYRAVM*DKLTCK
Trigger: CTTGCAGGTCAGCTTGTCTCACATAACAGCTCTATA...TCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp TGCCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAGCATTGGCTCTATGGAGGGTaGCAACATGAGTCACAAAAT +
Preference number: 4 (lower is better)
Translates to: CPCRSRAIKSMLFALSQHWLYGG*QHESQN
Trigger: ATTTTGTGACTCATGTTGTCACCCTCCATAGAGCCA...ATGCTGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR GCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCCCAGAAAATTCCGTATaGTCTCCAGTAGAATTTACG +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFPENSV*SPVEFT
Trigger: CGTAAATTCTACTGGAGAGCATACGGAATTTTCTGG...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAATTCAGTAAACGCCTGTaGTTGGAATTGGCGGACATC +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQFSKRL*LELADI
Trigger: GATGTCCGCCAATTCCAAGCACAGGCGTTTACTGAA...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATAAGCTGTTCAACCTGTaGAATTTGCTGTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYKLFNL*NLLFPH
Trigger: ATGTGGAAACAGCAAATTGCACAGGTTGAACAGCTT...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCCAGTCCTTGAAGTCTTaGAGTCTCTTGTTATGTTCA +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFQSLKS*SLLLCS
Trigger: TGAACATAACAAGAGACTGCAAGACTTCAAGGACTG...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAAGATTGGGTCAACCTTTaGCTACGAATGCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQDWVNL*LRMQSL
Trigger: CAAGGACTGCATTCGTAGGCAAAGGTTGACCCAATC...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCCGAGCACGAACGATTTaGTGTCGATTTTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFRARTI*CRFSFI
Trigger: GATAAAAGAAAATCGACAGCAAATCGTTCGTGCTCG...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATCGAGCACGAACGATTTaGTGTCGATTTTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYRARTI*CRFSFI
Trigger: GATAAAAGAAAATCGACAGCAAATCGTTCGTGCTCG...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACAGAAGGTTATTGGCAATaGTTACCCACTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: VQAKDTNAPILPVDASVTEGYWQ*LPTQHP
Trigger: CGGATGCTGAGTGGGTAACCATTGCCAATAACCTTC...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR CCA 90 bp TCCCCTAGCTTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTTCTTTAGTACTTTCTaGCTCTTCCAAACGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SPSFLAFGIPLTERVSVSFFSTF*LFQTFS
Trigger: GGAGAACGTTTGGAAGAGCCAGAAAGTACTAAAGAA...AGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAAGCTAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp CAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACAAAACACCCCTTGGACCTGAGCTaGATATACTTCCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: QKGFPCLQQRMSYSWTKHPLDLS*IYFPFA
Trigger: AGCAAATGGGAAGTATATCCAGCTCAGGTCCAAGGG...GTGTTTTGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAACCCTTGGACCTGAGCTaGATATACTTCCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQPLDLS*IYFPFA
Trigger: AGCAAATGGGAAGTATATCCAGCTCAGGTCCAAGGG...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp GGAAACTGCTCCAGCATAAGGGGCAGGAGACTGTGTTCACTTACTTTCATTGGATTTGTTAACTGGAGATaGAGAGAGCGAATGGGATCT +
Preference number: 4 (lower is better)
Translates to: GNCSSIRGRRLCSLTFIGFVNWR*RERMGS
Trigger: AGATCCCATTCGCTCTCTCCATCTCCAGTTAACAAA...TCCAATGAAAGTAAGTGAACACAGTCTCCTGCCCCTTATGCTGGAGCAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGTAAACGCCTGTGCTTaGAATTGGCGGACATCTGTT +
Preference number: 4 (lower is better)
Translates to: FLAFGIPLTERVSVSSTKVNACA*NWRTSV
Trigger: AACAGATGTCCGCCAATTCCAAGCACAGGCGTTTAC...CTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTCTTTTATCTTTGATTaGGTCAACCTTTGCCTACGA +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYSFIFD*VNLCLR
Trigger: TCGTAGGCAAAGGTTGACCCAATCAAAGATAAAAGA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp CCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACTACTATTATCAAGTCTaGCCTCATAGGGAGGGACTT +
Preference number: 4 (lower is better)
Translates to: PLTERVSVSSTKDVLLLDYYYQV*PHREGL
Trigger: AAGTCCCTCCCTATGAGGCCAGACTTGATAATAGTA...GTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACCACTATATTTTCTCCTaGAGACAGAATATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYHYIFS*RQNIEL
Trigger: CAGCTCTATATTCTGTCTCCAGGAGAAAATATAGTG...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553412.5
ENST00000553956.6
CDS-3UTR CCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAATGCTTTATTTGGCTTTaGGAGGCCACCTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQCFIWL*EATSDS
Trigger: AGAGTCAGAGGTGGCCTCCCAAAGCCAAATAAAGCA...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553412.5
3UTR CAA 72 bp TCAGTGGTAAATGATAATGCTAGCTCAGGTCCCAGGTaGAAGCTGCCCTGCACAGCTGATATGATTAGTGAT +
Preference number: 4 (lower is better)
Translates to: SVVNDNASSGPR*KLPCTADMISD
Trigger: ATCACTAATCATATCAGCTGTGCAGGGCAGCTTCAACCTGGGACCTGAGCTAGCATTATCATTTACCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582724.1
CDS-3UTR TCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTTAGCATCACAGTCTTaGAGTTCATGTATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYLASQS*SSCILR
Trigger: TCTGAGAATACATGAACTTCAAGACTGTGATGCTAA...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR TCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACAGTAGTCCAAGGCCAGTaGATCAATTACTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: VQAKDTNAPILPVDASVTVVQGQ*INYCLY
Trigger: GTACAAGCAGTAATTGATTCACTGGCCTTGGACTAC...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR TCA 90 bp ATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTTTTTCTCCTGTTATGTaGGACAAGCTGACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: IWNPTHRKGFRVFNKGCPFSPVM*DKLTCK
Trigger: CTTGCAGGTCAGCTTGTCTCACATAACAGGAGAAAA...AGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS-3UTR TCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACATTTTCTCCTGTTATGTaGGACAAGCTGACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VQAKDTNAPILPVDASVTFSPVM*DKLTCK
Trigger: CTTGCAGGTCAGCTTGTCTCACATAACAGGAGAAAA...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR TCA 90 bp CCTAGCTTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAGTTTCACTTTTCTCATaGGATGTTTCACTGATGCGT +
Preference number: 4 (lower is better)
Translates to: PSFLAFGIPLTERVSVSSVSLFS*DVSLMR
Trigger: ACGCATCAGTGAAACATCTCATGAGAAAAGTGAAAC...TGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAAGCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp AAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTACGGCTGGGGAGCAGTaGCTTGAATGCAAGTATTCT +
Preference number: 4 (lower is better)
Translates to: KDVLLLDKTLGGYNISSCTAGEQ*LECKYS
Trigger: AGAATACTTGCATTCAAGTCACTGCTCCCCAGCCGT...ACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
CDS-3UTR TCA 90 bp TCATATAGTGAGAGGAAGAACCCAGCACTGAACCCATGGTCTTCCTTCGAACCCATTAGACTTTTCTCATaGGATGTTTCACTGATGCGT +
Preference number: 4 (lower is better)
Translates to: SYSERKNPALNPWSSFEPIRLFS*DVSLMR
Trigger: ACGCATCAGTGAAACATCTCATGAGAAAAGTCTAAT...GGGTTCGAAGGAAGACCATGGGTTCAGTGCTGGGTTCTTCCTCTCACTATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582724.1
CDS-3UTR GCA 90 bp CTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTGATTTAGAACTTCTCAGCATCCGAGCCTaGCATGTTTCAGAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLDKTLGGYNISSCDLELLSIRA*HVSEAG
Trigger: ACCTGCCTCTGAAACATGGCAGGCTCGGATGCTGAG...AAGTTCTAAATCACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS-3UTR GCA 90 bp TCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGCCAGAAAATTCCGTATaGTCTCCAGTAGAATTTACG +
Preference number: 4 (lower is better)
Translates to: SHSQKGFPCLQQRMSYSWPENSV*SPVEFT
Trigger: CGTAAATTCTACTGGAGAGCATACGGAATTTTCTGG...CCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
CDS-3UTR GCA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTACTTTCATTGGAACTaGTTTATTTGGCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYYFHWN*FIWLWE
Trigger: CTCCCAAAGCCAAATAAAGCAGTTCCAATGAAAGTA...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCAATAACTATGAGGTCTaGTACCTTTTCTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTNNYEV*YLFSQN
Trigger: ATTTTGGGAGAAAAGGTACCAGACCTCATAGTTATT...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TTGCTGCCTTTAGGCAACTTGGAAATTAAGAAAAGTCCATCATCTAGATCCCCACTCTTTCTTGGCCTCTaGGGGAAAGGTGAATTGCAG +
Preference number: 4 (lower is better)
Translates to: LLPLGNLEIKKSPSSRSPLFLGL*GKGELQ
Trigger: CTGCAATTCACCTTTCCCCCAGAGGCCAAGAAAGAG...TGGGGATCTAGATGATGGACTTTTCTTAATTTCCAAGTTGCCTAAAGGCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp AAATCTTCCAGGGCTGACTACATTCTGGAGTTCCTTTACGAACAGCTTCTCCTCGATGTTCCTGTGATATaGCTTCTGCCAGCAATGAAA +
Preference number: 4 (lower is better)
Translates to: KSSRADYILEFLYEQLLLDVPVI*LLPAMK
Trigger: TTTCATTGCTGGCAGAAGCCATATCACAGGAACATC...GAGGAGAAGCTGTTCGTAAAGGAACTCCAGAATGTAGTCAGCCCTGGAAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp TCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACAAAAGTAGTCCAAGGCCAGTaGATCAATTACTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SQKGFPCLQQRMSYSWTKVVQGQ*INYCLY
Trigger: GTACAAGCAGTAATTGATTCACTGGCCTTGGACTAC...TTTTGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000579860.5
CDS-3UTR TCA 90 bp AAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTTTATGTGAGACAAGCTaGCCTGCAAGTAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: KDVLLLDKTLGGYNISSCLCETS*PASSPR
Trigger: CCTTGGACTACTTGCAGGTCAGCTTGTCTCACATAA...ACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000579860.5
CDS-3UTR TCA 90 bp TCTACATGCTTCTTTCTTAAGCTGTTCAACCTGTGCAATTTGCTGTTTCCACATATGCCATCACTGTGCTaGGACAGTGTCTCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: STCFFLKLFNLCNLLFPHMPSLC*DSVSSV
Trigger: AACTGAGGAGACACTGTCTCAGCACAGTGATGGCAT...ATGTGGAAACAGCAAATTGCACAGGTTGAACAGCTTAAGAAAGAAGCATGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp GAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACAAAACACTATACGAATGCAGTCCTTaGAGTCTTGCAGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: ERVSVSSTKDVLLLDKTLYECSP*SLAVSC
Trigger: ACAAGAGACTGCAAGACTTCAAGGACTGCATTCGTA...TAGTGTTTTGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp TATGTGCCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACACTGGCTTTAAGTTCTTaGTGTTCCTGTGATATGGCT +
Preference number: 4 (lower is better)
Translates to: YVPMPKSSNKINAVCTVTLALSS*CSCDMA
Trigger: AGCCATATCACAGGAACATCAAGAACTTAAAGCCAG...TGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGGCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR GCA 90 bp AAAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTTCAGTAAACGCCTGTaGTTGGAATTGGCGGACATC +
Preference number: 4 (lower is better)
Translates to: KGCPTLGQNTRRVQHIFMFSKRL*LELADI
Trigger: GATGTCCGCCAATTCCAAGCACAGGCGTTTACTGAA...CATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR GCA 90 bp TATGTGCCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAAAGTTCAAGAACACATaGCATCCTGAGTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: YVPMPKSSNKINAVCTVTKFKNT*HPELMP
Trigger: AGGCATCAACTCAGGATGGCATGTGTTCTTGAACTT...TGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGGCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR CCA 90 bp AAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTGAAGGTTATTGGCAATaGTTACCCACTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: KDVLLLDKTLGGYNISSCEGYWQ*LPTQHP
Trigger: CGGATGCTGAGTGGGTAACCATTGCCAATAACCTTC...ACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000579860.5
CDS-3UTR CCA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCAATAACTATGAGGTCTaGTACCTTTTCTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFNNYEV*YLFSQN
Trigger: ATTTTGGGAGAAAAGGTACCAGACCTCATAGTTATT...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp AAATGCTTCAGTAAACGCCTGTGCTTGGAATTGGCGGACATCTGTTTCTCTTGGTTTGTGTTTGTTAACTaGAGATGGAGAGAGCGAATG +
Preference number: 4 (lower is better)
Translates to: KCFSKRLCLELADICFSWFVFVN*RWRERM
Trigger: CATTCGCTCTCTCCATCTCCAGTTAACAAACACAAA...CCAAGAGAAACAGATGTCCGCCAATTCCAAGCACAGGCGTTTACTGAAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp CCTAGCTTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCATCTTTTATCTTTGATTaGGTCAACCTTTGCCTACGA +
Preference number: 4 (lower is better)
Translates to: PSFLAFGIPLTERVSVSSSFIFD*VNLCLR
Trigger: TCGTAGGCAAAGGTTGACCCAATCAAAGATAAAAGA...TGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAAGCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAGCATCAACGTGATGTTCCTGTGATATaGCTTCTGCCAGCAATGAAA +
Preference number: 4 (lower is better)
Translates to: CRSRAIKSMLFALSQHQRDVPVI*LLPAMK
Trigger: TTTCATTGCTGGCAGAAGCCATATCACAGGAACATC...ACGTTGATGCTGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR CCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAATACTATTATCAAGTCTaGCCTCATAGGGAGGGACTT +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQYYYQV*PHREGL
Trigger: AAGTCCCTCCCTATGAGGCCAGACTTGATAATAGTA...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
3UTR CAA 72 bp AGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTaGGACAAAACACTAGGAGGGTACAACATATCTTCA +
Preference number: 4 (lower is better)
Translates to: RVSVSSTKDVLL*DKTLGGYNISS
Trigger: TGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553956.6
ENST00000577960.1
ENST00000579860.5
3UTR CAA 72 bp CCTGTGCAATTTGCTGTTTCCACATTTTGCTTAGTGTaGGGCCAGAAACATAAAGAAACGGAAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PVQFAVSTFCLV*GQKHKETETAP
Trigger: TGGAGCAGTTTCCGTTTCTTTATGTTTCTGGCCCAACACTAAGCAAAATGTGGAAACAGCAAATTGCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
3UTR CAA 72 bp GAGCACGAACGATTTGCTGTCGATTTTCTTTTATCTTaGATTGGGTCAACCTTTGCCTACGAATGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: EHERFAVDFLLS*IGSTFAYECSP
Trigger: AGGACTGCATTCGTAGGCAAAGGTTGACCCAATCAAAGATAAAAGAAAATCGACAGCAAATCGTTCGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp CCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATTAGCATCACAGTCTTaGAGTTCATGTATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: PSIWNPTHRKGFRVFNKGLASQS*SSCILR
Trigger: TCTGAGAATACATGAACTTCAAGACTGTGATGCTAA...TCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000579860.5
CDS-3UTR TCA 90 bp AGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTTGTGCATCATCTTCTTaGCTCCTAGGAATAACTATG +
Preference number: 4 (lower is better)
Translates to: SIWNPTHRKGFRVFNKGCCASSS*LLGITM
Trigger: CATAGTTATTCCTAGGAGTCAAGAAGATGATGCACA...ACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000579860.5
CDS-3UTR TCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACATGTGCATCATCTTCTTaGCTCCTAGGAATAACTATG +
Preference number: 4 (lower is better)
Translates to: VQAKDTNAPILPVDASVTCASSS*LLGITM
Trigger: CATAGTTATTCCTAGGAGTCAAGAAGATGATGCACA...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR TCA 90 bp AACAAAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCGTAGTCCAAGGCCAGTaGATCAATTACTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: NKGCPTLGQNTRRVQHIFVVQGQ*INYCLY
Trigger: GTACAAGCAGTAATTGATTCACTGGCCTTGGACTAC...GAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000579860.5
CDS-3UTR TCA 90 bp AGTCTCTTGTTATGTTCATATTCTTTCTTGACAAGGGTAGTAAGGAGGTCATGCTTATGTGAGACAAGCTaGCCTGCAAGTAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SLLLCSYSFLTRVVRRSCLCETS*PASSPR
Trigger: CCTTGGACTACTTGCAGGTCAGCTTGTCTCACATAA...GCATGACCTCCTTACTACCCTTGTCAAGAAAGAATATGAACATAACAAGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp AACAAAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCTGGGGAGCAGTGACTTaGATGCAAGTATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: NKGCPTLGQNTRRVQHIFWGAVT*MQVFFS
Trigger: GGAAAAGAATACTTGCATTCAAGTCACTGCTCCCCA...GAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
CDS-3UTR TCA 90 bp TTGCTGCCTTTAGGCAACTTGGAAATTAAGAAAAGTCCATCATCTAGATCCCCATTCTTGATGTTCCTGTaGTATGGCTTCTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LLPLGNLEIKKSPSSRSPFLMFL*YGFCQQ
Trigger: TTGCTGGCAGAAGCCATATCACAGGAACATCAAGAA...TGGGGATCTAGATGATGGACTTTTCTTAATTTCCAAGTTGCCTAAAGGCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp AACAAAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCGGAGCACTTTTCTCATaGGATGTTTCACTGATGCGT +
Preference number: 4 (lower is better)
Translates to: NKGCPTLGQNTRRVQHIFGALFS*DVSLMR
Trigger: ACGCATCAGTGAAACATCTCATGAGAAAAGTGCTCC...GAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS-3UTR GCA 90 bp AAATGCTTCAGTAAACGCCTGTGCTTGGAATTGGCGGACATCTGTTTCTCTTGGTACTTTCATTGGAACTaGTTTATTTGGCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KCFSKRLCLELADICFSWYFHWN*FIWLWE
Trigger: CTCCCAAAGCCAAATAAAGCAGTTCCAATGAAAGTA...CCAAGAGAAACAGATGTCCGCCAATTCCAAGCACAGGCGTTTACTGAAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR GCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAAAAGCTGTTCAACCTGTaGAATTTGCTGTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQKLFNL*NLLFPH
Trigger: ATGTGGAAACAGCAAATTGCACAGGTTGAACAGCTT...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp AGAAAAGGTGTGTGCTGTGTCTCCAAGTCTAATGATTTCACCAGTGGATTCTGCCAGTCCTTGAAGTCTTaGAGTCTCTTGTTATGTTCA +
Preference number: 4 (lower is better)
Translates to: RKGVCCVSKSNDFTSGFCQSLKS*SLLLCS
Trigger: TGAACATAACAAGAGACTGCAAGACTTCAAGGACTG...GCAGAATCCACTGGTGAAATCATTAGACTTGGAGACACAGCACACACCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR GCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAACGAGCACGAACGATTTaGTGTCGATTTTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQRARTI*CRFSFI
Trigger: GATAAAAGAAAATCGACAGCAAATCGTTCGTGCTCG...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR GCA 90 bp TTTATGGTTGGCTCTATGGAGGGTGACAACATGAGTCACAAAATGAAAAGTTCAATGCCTCTGTCATGTTaGAGAGCTCAGCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: FMVGSMEGDNMSHKMKSSMPLSC*RAQLSV
Trigger: GACAGAAAGCTGAGCTCTGCAACATGACAGAGGCAT...TGAACTTTTCATTTTGTGACTCATGTTGTCACCCTCCATAGAGCCAACCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR GCA 90 bp TATGTGCCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAAAAATCAATGCTGTTTaGACTGTCACAGCATCAACG +
Preference number: 4 (lower is better)
Translates to: YVPMPKSSNKINAVCTVTKINAV*TVTAST
Trigger: CGTTGATGCTGTGACAGTGCAAACAGCATTGATTTT...TGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGGCACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR CCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAATTCTTTAGTACTTTCTaGCTCTTCCAAACGTTCTCC +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQFFSTF*LFQTFS
Trigger: GGAGAACGTTTGGAAGAGCCAGAAAGTACTAAAGAA...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp ACAAAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCAGACATCTGTTTCTCTTaGCTTGCGCTGCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TKDVLLLDKTLGGYNISSDICFS*LALPFS
Trigger: AGAAAAAGGCAGCGCAAGCCAAGAGAAACAGATGTC...TGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TCTACATGCTTCTTTCTTAAGCTGTTCAACCTGTGCAATTTGCTGTTTCCACATTGGAACTGCTTTATTTaGCTTTGGGAGGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: STCFFLKLFNLCNLLFPHWNCFI*LWEATS
Trigger: AGAGGTGGCCTCCCAAAGCCAAATAAAGCAGTTCCA...ATGTGGAAACAGCAAATTGCACAGGTTGAACAGCTTAAGAAAGAAGCATGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAACATCTCGCTTTTCTTTaGCATAGTTTCTTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQHLAFL*HSFLGL
Trigger: GAGACCTAAGAAACTATGCCAAAGAAAAGCGAGATG...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CCA 90 bp TTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACATCTCGCTTTTCTTTaGCATAGTTTCTTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: FGIPLTERVSVSSTKDVLHLAFL*HSFLGL
Trigger: GAGACCTAAGAAACTATGCCAAAGAAAAGCGAGATG...TAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TTTATGGTTGGCTCTATGGAGGGTGACAACATGAGTCACAAAATGAAAAGTTCATCCAGTTCATCCTGGTaGCGTCTCCTTTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: FMVGSMEGDNMSHKMKSSSSSSW*RLLCSS
Trigger: AGATGAACAAAGGAGACGCCACCAGGATGAACTGGA...TGAACTTTTCATTTTGTGACTCATGTTGTCACCCTCCATAGAGCCAACCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR TCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACATTAGCATCACAGTCTTaGAGTTCATGTATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VQAKDTNAPILPVDASVTLASQS*SSCILR
Trigger: TCTGAGAATACATGAACTTCAAGACTGTGATGCTAA...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR TCA 90 bp TTCAACAAAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCAGTTCAGAAAGCCGCTaGGAGAGTTTTTCTGATACA +
Preference number: 4 (lower is better)
Translates to: FNKGCPTLGQNTRRVQHISSESR*ESFSDT
Trigger: TGTATCAGAAAAACTCTCTCAGCGGCTTTCTGAACT...GATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTTGTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp TTTATGGTTGGCTCTATGGAGGGTGACAACATGAGTCACAAAATGAAAAGTTCAGGCTTCTGCCAGCAATaGAAACTGGTCCTTATAGTA +
Preference number: 4 (lower is better)
Translates to: FMVGSMEGDNMSHKMKSSGFCQQ*KLVLIV
Trigger: TACTATAAGGACCAGTTTTCATTGCTGGCAGAAGCC...TGAACTTTTCATTTTGTGACTCATGTTGTCACCCTCCATAGAGCCAACCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR TCA 90 bp GCTGTTTGCACTGTCACAGCATCAACGTTTTTAAAGAATATTGAGTTTGTAATGGGTAGTACCTGGGCCTaGGATTTCTCTCTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: AVCTVTASTFLKNIEFVMGSTWA*DFSLAL
Trigger: TAAAGCCAGAGAGAAATCTCAGGCCCAGGTACTACC...CATTACAAACTCAATATTCTTTAAAAACGTTGATGCTGTGACAGTGCAAACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR TCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACAAACTTACTTTTCTCATaGGATGTTTCACTGATGCGT +
Preference number: 4 (lower is better)
Translates to: VQAKDTNAPILPVDASVTNLLFS*DVSLMR
Trigger: ACGCATCAGTGAAACATCTCATGAGAAAAGTAAGTT...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR GCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACATGTCACAAATGTAAGTaGAGGCTAAAGACACAAATG +
Preference number: 4 (lower is better)
Translates to: VQAKDTNAPILPVDASVTCHKCK*RLKTQM
Trigger: CATTTGTGTCTTTAGCCTGCACTTACATTTGTGACA...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR CCA 90 bp ACTGAACTCTATAATCATCATAATATTTTCGAGCACGAACGATTTGCTGTCGATAGTATTCTTTTCCTATaGGGCAGGGTGCTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: TELYNHHNIFEHERFAVDSILFL*GRVLEA
Trigger: AGCCTCGAGCACCCTGCCCCATAGGAAAAGAATACT...ATCGACAGCAAATCGTTCGTGCTCGAAAATATTATGATGATTATAGAGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TTTCTTAAATATCATTTCTTCCCGGGTCCTCATTCTCATCATTTTTGCACACAAGAGTCCAGTTCATCCTaGTGGCGTCTCCTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: FLKYHFFPGPHSHHFCTQESSSS*WRLLCS
Trigger: TGAACAAAGGAGACGCCACCAGGATGAACTGGACTC...TTGTGTGCAAAAATGATGAGAATGAGGACCCGGGAAGAAATGATATTTAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR GCA 90 bp CTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTGATTTAGAACTTTTCACCAGTGGATTCTaGTTCATCTCCATCCCAAGA +
Preference number: 4 (lower is better)
Translates to: LLDKTLGGYNISSCDLELFTSGF*FISIPR
Trigger: TCTTGGGATGGAGATGAAGCAGAATCCACTGGTGAA...AAGTTCTAAATCACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553956.6
ENST00000577960.1
ENST00000579860.5
CDS-3UTR GCA 90 bp AAAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGCCAGAAAATTCCGTATaGTCTCCAGTAGAATTTACG +
Preference number: 4 (lower is better)
Translates to: KGCPTLGQNTRRVQHIFMPENSV*SPVEFT
Trigger: CGTAAATTCTACTGGAGAGCATACGGAATTTTCTGG...CATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
CDS-3UTR GCA 90 bp TTTATGGTTGGCTCTATGGAGGGTGACAACATGAGTCACAAAATGAAAAGTTCACTATGTATGTGCCCATaGCGAAGTCGAGCAATAAAA +
Preference number: 4 (lower is better)
Translates to: FMVGSMEGDNMSHKMKSSLCMCP*RSRAIK
Trigger: TTTTATTGCTCGACTTCGGCATGGGCACATACATAG...TGAACTTTTCATTTTGTGACTCATGTTGTCACCCTCCATAGAGCCAACCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR CCA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACAAATAACTATGAGGTCTaGTACCTTTTCTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VQAKDTNAPILPVDASVTNNYEV*YLFSQN
Trigger: ATTTTGGGAGAAAAGGTACCAGACCTCATAGTTATT...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR CCA 90 bp ACTGAACTCTATAATCATCATAATATTTTCGAGCACGAACGATTTGCTGTCGATGCCTGTGCTTGGAATTaGCGGACATCTGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TELYNHHNIFEHERFAVDACAWN*RTSVSL
Trigger: AAGAGAAACAGATGTCCGCCAATTCCAAGCACAGGC...ATCGACAGCAAATCGTTCGTGCTCGAAAATATTATGATGATTATAGAGTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp AGTCTCTTGTTATGTTCATATTCTTTCTTGACAAGGGTAGTAAGGAGGTCATGCTATAGTAGTTCTCCATaGAGTCCAGTTCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLLLCSYSFLTRVVRRSCYSSSP*SPVHPG
Trigger: ACCAGGATGAACTGGACTCCATGGAGAACTACTATA...GCATGACCTCCTTACTACCCTTGTCAAGAAAGAATATGAACATAACAAGAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp TCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACAAAACACTATATTTTCTCCTaGAGACAGAATATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SQKGFPCLQQRMSYSWTKHYIFS*RQNIEL
Trigger: CAGCTCTATATTCTGTCTCCAGGAGAAAATATAGTG...TTTTGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR TCA 90 bp GTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTGATTTATGTGCATCATCTTCTTaGCTCCTAGGAATAACTATG +
Preference number: 4 (lower is better)
Translates to: VLLLDKTLGGYNISSCDLCASSS*LLGITM
Trigger: CATAGTTATTCCTAGGAGTCAAGAAGATGATGCACA...TAAATCACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000579860.5
CDS-3UTR CCA 90 bp TCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACAAAAAATAACTATGAGGTCTaGTACCTTTTCTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: SQKGFPCLQQRMSYSWTKNNYEV*YLFSQN
Trigger: ATTTTGGGAGAAAAGGTACCAGACCTCATAGTTATT...TTTTGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000579860.5
CDS-3UTR CCA 90 bp TTTATGGTTGGCTCTATGGAGGGTGACAACATGAGTCACAAAATGAAAAGTTCACATCTCGCTTTTCTTTaGCATAGTTTCTTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: FMVGSMEGDNMSHKMKSSHLAFL*HSFLGL
Trigger: GAGACCTAAGAAACTATGCCAAAGAAAAGCGAGATG...TGAACTTTTCATTTTGTGACTCATGTTGTCACCCTCCATAGAGCCAACCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR GCA 90 bp CTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTGATTTAGAACTTAAGCTGTTCAACCTGTaGAATTTGCTGTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: LLDKTLGGYNISSCDLELKLFNL*NLLFPH
Trigger: ATGTGGAAACAGCAAATTGCACAGGTTGAACAGCTT...AAGTTCTAAATCACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CCA 90 bp GCTGTTTGCACTGTCACAGCATCAACGTTTTTAAAGAATATTGAGTTTGTAATGTATAGTAGTTCTCCATaGAGTCCAGTTCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: AVCTVTASTFLKNIEFVMYSSSP*SPVHPG
Trigger: ACCAGGATGAACTGGACTCCATGGAGAACTACTATA...CATTACAAACTCAATATTCTTTAAAAACGTTGATGCTGTGACAGTGCAAACAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583676.1
3UTR CAA 72 bp CTAAGACAGTTTCCAACCAGCTGGAACAATAAGAATTaGAAATTTACAACTACGGTTATCAGGTATACTGTA +
Preference number: 4 (lower is better)
Translates to: LRQFPTSWNNKN*KFTTTVIRYTV
Trigger: TACAGTATACCTGATAACCGTAGTTGTAAATTTCAAATTCTTATTGTTCCAGCTGGTTGGAAACTGTCTTAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS CCA 90 bp AGGTCGCCGCCGGACTCCGACGCGGCCGGGAAGGCGACGGTGTCCTaGAAGGACCGATCCACGCAGACCCGACACTGGGGCGCGGACGCA +
Preference number: 5 (lower is better)
Translates to: RSPPDSDAAGKATVS*KDRSTQTRHWGADA
Trigger: TGCGTCCGCGCCCCAGTGTCGGGTCTGCGTGGATCGGTCCTTCCAGGACACCGTCGCCTTCCCGGCCGCGTCGGAGTCCGGCGGCGACCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556440.7
ENST00000579860.5
ENST00000580188.1
CDS CCA 90 bp AAGGCGACGGTGTCCTGGAAGGACCGATCCACGCAGACCCGACACTaGGGCGCGGACGCACGAACCAAAGCGCGGGGAAGGAGGCGTGAA +
Preference number: 5 (lower is better)
Translates to: KATVSWKDRSTQTRH*GADARTKARGRRRE
Trigger: TTCACGCCTCCTTCCCCGCGCTTTGGTTCGTGCGTCCGCGCCCCAGTGTCGGGTCTGCGTGGATCGGTCCTTCCAGGACACCGTCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS TCA 90 bp GGCCCCAGAAGCCCTTCAGCCTTTGGCAGCTTTATCACCTCAATCTaGAGAGCAGCTCCAATAACACCCCACTGCAGCAGAGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GPRSPSAFGSFITSI*RAAPITPHCSRGQQ
Trigger: CTGCTGCCCTCTGCTGCAGTGGGGTGTTATTGGAGCTGCTCTTCAGATTGAGGTGATAAAGCTGCCAAAGGCTGAAGGGCTTCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581885.1
CDS GCA 90 bp ATGTTGCAGAGCTCAGCTTTCTGTCTCCTCGCAGAGCAGGGAAGGTaGCCGTTTTCTCCGGCCGTGGTGACTGCTCAGTTGGTAGTACCT +
Preference number: 5 (lower is better)
Translates to: MLQSSAFCLLAEQGR*PFSPAVVTAQLVVP
Trigger: AGGTACTACCAACTGAGCAGTCACCACGGCCGGAGAAAACGGGCACCTTCCCTGCTCTGCGAGGAGACAGAAAGCTGAGCTCTGCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS CCA 90 bp GGCGTGAAAGAAGGACGGACGTTAAAAGAGCTTCTCGCCGCTGATTaGTCATCAGAGGAGCACTTCCTTTCACAGGACGTGAAACGGGGG +
Preference number: 5 (lower is better)
Translates to: GVKEGRTLKELLAAD*SSEEHFLSQDVKRG
Trigger: CCCCCGTTTCACGTCCTGTGAAAGGAAGTGCTCCTCTGATGACCAATCAGCGGCGAGAAGCTCTTTTAACGTCCGTCCTTCTTTCACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS-3UTR CAA 90 bp TCAGTGGTAAATGATAATGCTAGCTCAGGTCCCAGGTTGAAGCTGCCCTGCACAAGCTCAGGTCCCAGGTaGAAGCTGCCCTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: SVVNDNASSGPRLKLPCTSSGPR*KLPCTA
Trigger: AGCTGTGCAGGGCAGCTTCAACCTGGGACCTGAGCT...TGTGCAGGGCAGCTTCAACCTGGGACCTGAGCTAGCATTATCATTTACCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582724.1
CDS-3UTR CAA 90 bp GCTTCATCTCCATCCCAAGAGGGGCCCAACATCTCAGAAGACAAGGAGCACCTCTGGAAAGTCCTGGCCTaGACTTCTTTGGCCCATACT +
Preference number: 5 (lower is better)
Translates to: ASSPSQEGPNISEDKEHLWKVLA*TSLAHT
Trigger: AGTATGGGCCAAAGAAGTCAAGGCCAGGACTTTCCA...GAGGTGCTCCTTGTCTTCTGAGATGTTGGGCCCCTCTTGGGATGGAGATGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS TCA 90 bp AGGAGGCGTGAAAGAAGGACGGACGTTAAAAGAGCTTCTCGCCGCTaGTTGGTCATCAGAGGAGCACTTCCTTTCACAGGACGTGAAACG +
Preference number: 5 (lower is better)
Translates to: RRRERRTDVKRASRR*LVIRGALPFTGRET
Trigger: CGTTTCACGTCCTGTGAAAGGAAGTGCTCCTCTGATGACCAATCAGCGGCGAGAAGCTCTTTTAACGTCCGTCCTTCTTTCACGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS-3UTR CAA 90 bp AGTATTCTTTTCCTATGGGGCAGGGTGCTCGAGGCTCTGAAGGGTGGTAGGGTGAAGGATGTCCTACTCTaGGACAAAACACTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: SILFLWGRVLEALKGGRVKDVLL*DKTLGG
Trigger: CCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTT...CACCCTACCACCCTTCAGAGCCTCGAGCACCCTGCCCCATAGGAAAAGAATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
CDS-3UTR CAA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATCTGGCCTTGACTTCTTaGGCCCATACTCCACGATGC +
Preference number: 5 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYLALTS*AHTPRC
Trigger: GCATCGTGGAGTATGGGCCAAAGAAGTCAAGGCCAG...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACCGCCTGTGCTTGGAATaGGCGGACATCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYRLCLE*ADICFS
Trigger: AGAGAAACAGATGTCCGCCAATTCCAAGCACAGGCG...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp CCAGTGGATTCTGCTTCATCTCCATCCCAAGAGGGGCCCAACATCTCAGAAGACAGTAAACGCCTGTGCTaGGAATTGGCGGACATCTGT +
Preference number: 5 (lower is better)
Translates to: PVDSASSPSQEGPNISEDSKRLC*ELADIC
Trigger: ACAGATGTCCGCCAATTCCAAGCACAGGCGTTTACT...GTCTTCTGAGATGTTGGGCCCCTCTTGGGATGGAGATGAAGCAGAATCCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp GAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACAAAACACTATGCAGTGAGCCGAGATaGCGCCACCGCACTCCACCC +
Preference number: 5 (lower is better)
Translates to: ERVSVSSTKDVLLLDKTLCSEPR*RHRTPP
Trigger: GGGTGGAGTGCGGTGGCGCAATCTCGGCTCACTGCA...TAGTGTTTTGTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577960.1
CDS GCA 90 bp GAGAAGGGTAAGGACAAGAGGAATGCAGATTCCAGCGTTCTCATCTaGCTCACTCCCCATCACGATGTCTTCAGGCAGTATGTCACGTGT +
Preference number: 5 (lower is better)
Translates to: EKGKDKRNADSSVLI*LTPHHDVFRQYVTC
Trigger: ACACGTGACATACTGCCTGAAGACATCGTGATGGGGAGTGAGGCAGATGAGAACGCTGGAATCTGCATTCCTCTTGTCCTTACCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581885.1
CDS-3UTR CAA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACCTGTTAATCTCTTTCTaGGCCTCTGGGGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYLLISF*ASGGKV
Trigger: CACCTTTCCCCCAGAGGCCAAGAAAGAGATTAACAG...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTCTGTTTCTCTTGGCTaGCGCTGCCTTTTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTSVSLG*RCLFLS
Trigger: GGAGAGAAAAAGGCAGCGCAAGCCAAGAGAAACAGA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACGGACATCTGTTTCTCTaGGCTTGCGCTGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYGHLFL*ACAAFF
Trigger: GAAAAAGGCAGCGCAAGCCAAGAGAAACAGATGTCC...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATCGCCTGTGCTTGGAATaGGCGGACATCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYRLCLE*ADICFS
Trigger: AGAGAAACAGATGTCCGCCAATTCCAAGCACAGGCG...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TGGAGTCCAGTTCATCCTGGTGGCGTCTCCTTTGTTCATCTCGCTTTTCTTTGGCGCCTGTGCTTGGAATaGGCGGACATCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: WSPVHPGGVSFVHLAFLWRLCLE*ADICFS
Trigger: AGAGAAACAGATGTCCGCCAATTCCAAGCACAGGCG...CCAAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAGGATGAACTGGACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACAGTAAACGCCTGTGCTaGGAATTGGCGGACATCTGT +
Preference number: 5 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYSKRLC*ELADIC
Trigger: ACAGATGTCCGCCAATTCCAAGCACAGGCGTTTACT...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCCTGCTTTATTTGGCTTaGGGAGGCCACCTCTTAGAC +
Preference number: 5 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTLLYLA*GGHLLD
Trigger: GTCTAAGAGGTGGCCTCCCAAAGCCAAATAAAGCAG...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000556440.7
CDS TCA 90 bp TTACACAAACCTAGAGAGTACAGTCCACTGCACACCGGGGCTATATaGTACAGCCTATTGCTCCAACCACCAATGTACGAGGTCCCTTGC +
Preference number: 5 (lower is better)
Translates to: LHKPREYSPLHTGAI*YSLLLQPPMYEVPC
Trigger: GCAAGGGACCTCGTACATTGGTGGTTGGAGCAATAGGCTGTATCATATAGCCCCGGTGTGCAGTGGACTGTACTCTCTAGGTTTGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581885.1
CDS-3UTR CAA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACAAGGATGTCCTACTCTaGGACAAAACACTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYKDVLL*DKTLGG
Trigger: CCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTT...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTGGAAAGTCCTGGCCTaGACTTCTTTGGCCCATACT +
Preference number: 5 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYWKVLA*TSLAHT
Trigger: AGTATGGGCCAAAGAAGTCAAGGCCAGGACTTTCCA...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GCTTCATCTCCATCCCAAGAGGGGCCCAACATCTCAGAAGACAAGGAGCACCTCTGGAACTGTTTGTGTTaGTTAACTGGAGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: ASSPSQEGPNISEDKEHLWNCLC*LTGDGE
Trigger: CTCTCCATCTCCAGTTAACAAACACAAACAGTTCCA...GAGGTGCTCCTTGTCTTCTGAGATGTTGGGCCCCTCTTGGGATGGAGATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCTCTGTTTCTCTTGGCTaGCGCTGCCTTTTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFSVSLG*RCLFLS
Trigger: GGAGAGAAAAAGGCAGCGCAAGCCAAGAGAAACAGA...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATGGACATCTGTTTCTCTaGGCTTGCGCTGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYGHLFL*ACAAFF
Trigger: GAAAAAGGCAGCGCAAGCCAAGAGAAACAGATGTCC...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATAGTAAACGCCTGTGCTaGGAATTGGCGGACATCTGT +
Preference number: 5 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYSKRLC*ELADIC
Trigger: ACAGATGTCCGCCAATTCCAAGCACAGGCGTTTACT...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TCCCCTAGCTTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTTGGAACTGCTTTATTaGGCTTTGGGAGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: SPSFLAFGIPLTERVSVSLELLY*ALGGHL
Trigger: GAGGTGGCCTCCCAAAGCCAAATAAAGCAGTTCCAA...AGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAAGCTAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCCTGGTGGCGTCTCCTTaGTTCATCTCGCTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTLVASP*FISLFF
Trigger: AAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAG...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS GCA 90 bp TCAAGCAGCCATGTACATAGGGTAAGAACGCCAAGAGCAGAAACATaGCACACCTACACATGTACATCACTGAGGAGGGGGAGTGATCAT +
Preference number: 5 (lower is better)
Translates to: SSSHVHRVRTPRAET*HTYTCTSLRRGSDH
Trigger: ATGATCACTCCCCCTCCTCAGTGATGTACATGTGTAGGTGTGGCATGTTTCTGCTCTTGGCGTTCTTACCCTATGTACATGGCTGCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS GCA 90 bp GAGAGTACAGTCCACTGCACACCGGGGCTATATGATACAGCCTATTaGTCCAACCACCAATGTACGAGGTCCCTTGCTGAAAGAAACATT +
Preference number: 5 (lower is better)
Translates to: ESTVHCTPGLYDTAY*SNHQCTRSLAERNI
Trigger: AATGTTTCTTTCAGCAAGGGACCTCGTACATTGGTGGTTGGAGCAATAGGCTGTATCATATAGCCCCGGTGTGCAGTGGACTGTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581885.1
CDS-3UTR CAA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCGGATATACTTCCCATTaGCTGCCTTTAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTGYTSH*LPLGNL
Trigger: CAAGTTGCCTAAAGGCAGCAAATGGGAAGTATATCC...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACGGATATACTTCCCATTaGCTGCCTTTAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYGYTSH*LPLGNL
Trigger: CAAGTTGCCTAAAGGCAGCAAATGGGAAGTATATCC...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GGAAACTGCTCCAGCATAAGGGGCAGGAGACTGTGTTCACTTACTTTCATTGGACTGTTAATCTCTTTCTaGGCCTCTGGGGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: GNCSSIRGRRLCSLTFIGLLISF*ASGGKV
Trigger: CACCTTTCCCCCAGAGGCCAAGAAAGAGATTAACAG...TCCAATGAAAGTAAGTGAACACAGTCTCCTGCCCCTTATGCTGGAGCAGTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAACTGGCCTTGACTTCTTaGGCCCATACTCCACGATGC +
Preference number: 5 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQLALTS*AHTPRC
Trigger: GCATCGTGGAGTATGGGCCAAAGAAGTCAAGGCCAG...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp AGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCTGGCCTTGACTTCTTaGGCCCATACTCCACGATGC +
Preference number: 5 (lower is better)
Translates to: SIWNPTHRKGFRVFNKGCLALTS*AHTPRC
Trigger: GCATCGTGGAGTATGGGCCAAAGAAGTCAAGGCCAG...ACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp CCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGACCTGCTTTATTTGGCTTaGGGAGGCCACCTCTTAGAC +
Preference number: 5 (lower is better)
Translates to: PLTERVSVSSTKDVLLLDLLYLA*GGHLLD
Trigger: GTCTAAGAGGTGGCCTCCCAAAGCCAAATAAAGCAG...GTCCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTGCTGTTTCCACATTTaGCTTAGTGTTGGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYCCFHI*LSVGPE
Trigger: TTCTGGCCCAACACTAAGCAAAATGTGGAAACAGCA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTGCTGTTTCCACATTTaGCTTAGTGTTGGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTCCFHI*LSVGPE
Trigger: TTCTGGCCCAACACTAAGCAAAATGTGGAAACAGCA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCGCAGTCCTTGAAGTCTaGCAGTCTCTTGTTATGTTC +
Preference number: 5 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTAVLEV*QSLVMF
Trigger: GAACATAACAAGAGACTGCAAGACTTCAAGGACTGC...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCCTGGTGGCGTCTCCTTaGTTCATCTCGCTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFLVASP*FISLFF
Trigger: AAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAG...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GCAAGTATTCTTTTCCTATGGGGCAGGGTGCTCGAGGCTCTGAAGGGTGGTAGGATTAGCATCACAGTCTaGAAGTTCATGTATTCTCAG +
Preference number: 5 (lower is better)
Translates to: ASILFLWGRVLEALKGGRISITV*KFMYSQ
Trigger: CTGAGAATACATGAACTTCAAGACTGTGATGCTAAT...CCTACCACCCTTCAGAGCCTCGAGCACCCTGCCCCATAGGAAAAGAATACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp GGCTCCCCTAGCTTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCCAAGTGGAACTGTTaGTGTTTGTTAACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: GSPSFLAFGIPLTERVSVSKWNC*CLLTGD
Trigger: ATCTCCAGTTAACAAACACAAACAGTTCCACTTGGA...CACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAAGCTAGGGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp GTGGTAAATGATAATGCTAGCTCAGGTCCCAGGTTGAAGCTGCCCTGCACAGCTCTGTTAACTGGCATTTaGAAGAACCTGATCAGCTCT +
Preference number: 5 (lower is better)
Translates to: VVNDNASSGPRLKLPCTALLTGI*KNLISS
Trigger: AGAGCTGATCAGGTTCTTCAAAATGCCAGTTAACAG...AGCTGTGCAGGGCAGCTTCAACCTGGGACCTGAGCTAGCATTATCATTTACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582724.1
CDS-3UTR CAA 90 bp TGCCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAGCATACATGCCATCCTGAGTaGATGCCTCTGTCATGTTGC +
Preference number: 5 (lower is better)
Translates to: CPCRSRAIKSMLFALSQHTCHPE*MPLSCC
Trigger: GCAACATGACAGAGGCATCAACTCAGGATGGCATGT...ATGCTGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS GCA 90 bp GCAAAATGTCAGTGTACTTACACAAACCTAGAGAGTACAGTCCACTaGACACCGGGGCTATATGATACAGCCTATTGCTCCAACCACCAA +
Preference number: 5 (lower is better)
Translates to: AKCQCTYTNLESTVH*TPGLYDTAYCSNHQ
Trigger: TTGGTGGTTGGAGCAATAGGCTGTATCATATAGCCCCGGTGTGCAGTGGACTGTACTCTCTAGGTTTGTGTAAGTACACTGACATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581885.1
CDS-3UTR CAA 90 bp TCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTACTCTTGGGGATATACTTCCCATTaGCTGCCTTTAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: SHSQKGFPCLQQRMSYSWGYTSH*LPLGNL
Trigger: CAAGTTGCCTAAAGGCAGCAAATGGGAAGTATATCC...CCAAGAGTAGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
CDS-3UTR CAA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAACTGTTAATCTCTTTCTaGGCCTCTGGGGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQLLISF*ASGGKV
Trigger: CACCTTTCCCCCAGAGGCCAAGAAAGAGATTAACAG...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAATGGAAAGTCCTGGCCTaGACTTCTTTGGCCCATACT +
Preference number: 5 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQWKVLA*TSLAHT
Trigger: AGTATGGGCCAAAGAAGTCAAGGCCAGGACTTTCCA...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTGGAACTGTTTGTGTTaGTTAACTGGAGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYWNCLC*LTGDGE
Trigger: CTCTCCATCTCCAGTTAACAAACACAAACAGTTCCA...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCTGGAACTGTTTGTGTTaGTTAACTGGAGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFWNCLC*LTGDGE
Trigger: CTCTCCATCTCCAGTTAACAAACACAAACAGTTCCA...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTCCAAGTGGAACTGTTaGTGTTTGTTAACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTSKWNC*CLLTGD
Trigger: ATCTCCAGTTAACAAACACAAACAGTTCCACTTGGA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAATTGGAACTGCTTTATTaGGCTTTGGGAGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQLELLY*ALGGHL
Trigger: GAGGTGGCCTCCCAAAGCCAAATAAAGCAGTTCCAA...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTTCAACCTGTGCAATTaGCTGTTTCCACATTTTGCT +
Preference number: 5 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTFNLCN*LFPHFA
Trigger: AGCAAAATGTGGAAACAGCAAATTGCACAGGTTGAA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTTCAACCTGTGCAATTaGCTGTTTCCACATTTTGCT +
Preference number: 5 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYFNLCN*LFPHFA
Trigger: AGCAAAATGTGGAAACAGCAAATTGCACAGGTTGAA...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp AAATCTTCCAGGGCTGACTACATTCTGGAGTTCCTTTACGAACAGCTTCTCCTCCTACGAATGCAGTCCTaGAAGTCTTGCAGTCTCTTG +
Preference number: 5 (lower is better)
Translates to: KSSRADYILEFLYEQLLLLRMQS*KSCSLL
Trigger: CAAGAGACTGCAAGACTTCAAGGACTGCATTCGTAG...GAGGAGAAGCTGTTCGTAAAGGAACTCCAGAATGTAGTCAGCCCTGGAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTCGAGCACGAACGATTaGCTGTCGATTTTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTSSTND*LSIFFY
Trigger: ATAAAAGAAAATCGACAGCAAATCGTTCGTGCTCGA...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TGCCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAGCATCTGGTGGCGTCTCCTTaGTTCATCTCGCTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: CPCRSRAIKSMLFALSQHLVASP*FISLFF
Trigger: AAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAG...ATGCTGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR CAA 90 bp TTTATGGTTGGCTCTATGGAGGGTGACAACATGAGTCACAAAATGAAAAGTTCAGTGGTGACTGCTCAGTaGGTAGTACCTGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: FMVGSMEGDNMSHKMKSSVVTAQ*VVPGPE
Trigger: CTCAGGCCCAGGTACTACCAACTGAGCAGTCACCAC...TGAACTTTTCATTTTGTGACTCATGTTGTCACCCTCCATAGAGCCAACCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR CAA 90 bp TATGTGCCCATGCCGAAGTCGAGCAATAAAATCAATGCTGTTTGCACTGTCACAGATGCCTCTGTCATGTaGCAGAGCTCAGCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: YVPMPKSSNKINAVCTVTDASVM*QSSAFC
Trigger: ACAGAAAGCTGAGCTCTGCAACATGACAGAGGCATC...TGTGACAGTGCAAACAGCATTGATTTTATTGCTCGACTTCGGCATGGGCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS-3UTR CAA 90 bp ATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGATGTCCTAAGGATGTCCTACTCTaGGACAAAACACTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: IWNPTHRKGFRVFNKGCPKDVLL*DKTLGG
Trigger: CCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTT...AGGACATCCTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553956.6
ENST00000577960.1
ENST00000579860.5
CDS-3UTR CAA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTCCAAGTGGAACTGTTaGTGTTTGTTAACTGGAGAT +
Preference number: 5 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYSKWNC*CLLTGD
Trigger: ATCTCCAGTTAACAAACACAAACAGTTCCACTTGGA...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp AGCTTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACATGCTGTTTCCACATTTaGCTTAGTGTTGGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: SFLAFGIPLTERVSVSSTCCFHI*LSVGPE
Trigger: TTCTGGCCCAACACTAAGCAAAATGTGGAAACAGCA...TGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp TACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACCTTGGAGTTTCTTCTTaGATCGATTTTCTCTACATG +
Preference number: 5 (lower is better)
Translates to: YWLDSSSVLVKASRTFTYLGVSS*IDFLYM
Trigger: CATGTAGAGAAAATCGATCAAAGAAGAAACTCCAAG...GTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAACTACGAATGCAGTCCTaGAAGTCTTGCAGTCTCTTG +
Preference number: 5 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQLRMQS*KSCSLL
Trigger: CAAGAGACTGCAAGACTTCAAGGACTGCATTCGTAG...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCGATTTTCTTTTATCTTaGATTGGGTCAACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: VYWLDSSSVLVKASRTFTDFLLS*IGSTFA
Trigger: GGCAAAGGTTGACCCAATCAAAGATAAAAGAAAATC...GGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTCGAGCACGAACGATTaGCTGTCGATTTTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYSSTND*LSIFFY
Trigger: ATAAAAGAAAATCGACAGCAAATCGTTCGTGCTCGA...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS TCA 90 bp TGTAAATTCTGGATAGAAAAACTGGTTCTGACGGCGACGCATTCATaGGCTACAGACAAGTTACTTACGCTCTCCTCAAAGCCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: CKFWIEKLVLTATHS*ATDKLLTLSSKPSS
Trigger: AGAGGAAGGCTTTGAGGAGAGCGTAAGTAACTTGTCTGTAGCTCATGAATGCGTCGCCGTCAGAACCAGTTTTTCTATCCAGAATTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS-3UTR CAA 90 bp ACTGTTTACTGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCATTAGCATCACAGTCTaGAAGTTCATGTATTCTCAG +
Preference number: 5 (lower is better)
Translates to: TVYWLDSSSVLVKASRTFISITV*KFMYSQ
Trigger: CTGAGAATACATGAACTTCAAGACTGTGATGCTAAT...GAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCAGTAAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATATTAGCATCACAGTCTaGAAGTTCATGTATTCTCAG +
Preference number: 5 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYISITV*KFMYSQ
Trigger: CTGAGAATACATGAACTTCAAGACTGTGATGCTAAT...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TTCCTAGCATTTGGAATCCCACTCACAGAAAGGGTTTCCGTGTCTTCAACAAAGGGATATACTTCCCATTaGCTGCCTTTAGGCAACTTG +
Preference number: 5 (lower is better)
Translates to: FLAFGIPLTERVSVSSTKGYTSH*LPLGNL
Trigger: CAAGTTGCCTAAAGGCAGCAAATGGGAAGTATATCC...CTTTGTTGAAGACACGGAAACCCTTTCTGTGAGTGGGATTCCAAATGCTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000577960.1
CDS-3UTR CAA 90 bp AACAAAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCTCTGTTTCTCTTGGCTaGCGCTGCCTTTTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: NKGCPTLGQNTRRVQHIFSVSLG*RCLFLS
Trigger: GGAGAGAAAAAGGCAGCGCAAGCCAAGAGAAACAGA...GAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATCTTGGAGTTTCTTCTTaGATCGATTTTCTCTACATG +
Preference number: 5 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYLGVSS*IDFLYM
Trigger: CATGTAGAGAAAATCGATCAAAGAAGAAACTCCAAG...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp GATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATTATCAAGCAGTCCTTGAAGTCTaGCAGTCTCTTGTTATGTTC +
Preference number: 5 (lower is better)
Translates to: DSSSVLVKASRTFTYYYQAVLEV*QSLVMF
Trigger: GAACATAACAAGAGACTGCAAGACTTCAAGGACTGC...TTGATAATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS-3UTR CAA 90 bp TGGCTCGATTCTAGCTCTGTCCTGGTAAAGGCCTCCAGAACCTTCACCTACTATGATTTTCTTTTATCTTaGATTGGGTCAACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: WLDSSSVLVKASRTFTYYDFLLS*IGSTFA
Trigger: GGCAAAGGTTGACCCAATCAAAGATAAAAGAAAATC...ATAGTAGGTGAAGGTTCTGGAGGCCTTTACCAGGACAGAGCTAGAATCGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
CDS TCA 90 bp TCCTGTTATGTGAGACAAGCTGACCTGCAAGTAGTCCAAGGCCAGTaGATCAATTACTGCTTGTACATTGTGTGCATCATCTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: SCYVRQADLQVVQGQ*INYCLYIVCIIFLT
Trigger: AGTCAAGAAGATGATGCACACAATGTACAAGCAGTAATTGATTCACTGGCCTTGGACTACTTGCAGGTCAGCTTGTCTCACATAACAGGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000556440.7
ENST00000579860.5
ENST00000580188.1
ENST00000581056.5
CDS TCA 90 bp AGCTGTTATGTGAGACAAGCTGACCTGCAAGTAGTCCAAGGCCAGTaGATCAATTACTGCTTGTACATTGTGTGCATCATCTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: SCYVRQADLQVVQGQ*INYCLYIVCIIFLT
Trigger: AGTCAAGAAGATGATGCACACAATGTACAAGCAGTAATTGATTCACTGGCCTTGGACTACTTGCAGGTCAGCTTGTCTCACATAACAGCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553412.5
ENST00000553956.6
CDS CCA 90 bp CAAGCAGAACTCAGGGCCAGCACTATAGGACTTCAGTTTAGATTTTaGATTCAAATTTGGACAAGAGTCACGAACAAAGAAGGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: QAELRASTIGLQFRF*IQIWTRVTNKEGGP
Trigger: AGGACCACCTTCTTTGTTCGTGACTCTTGTCCAAATTTGAATCCAAAATCTAAACTGAAGTCCTATAGTGCTGGCCCTGAGTTCTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS-3UTR CAA 90 bp TTCAACAAAGGATGTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCCTGGTGGCGTCTCCTTaGTTCATCTCGCTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: FNKGCPTLGQNTRRVQHILVASP*FISLFF
Trigger: AAAGAAAAGCGAGATGAACAAAGGAGACGCCACCAG...GATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTTTGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS TCA 90 bp TTCTCCATCTTAGATCTCAGCTCCCTCTTCACCTTATGTAATGTCTaGAAAAAGAAGGCATGTCATCCCGCTGTTCACAGCATTTATCCA +
Preference number: 5 (lower is better)
Translates to: FSILDLSSLFTLCNV*KKKACHPAVHSIYP
Trigger: TGGATAAATGCTGTGAACAGCGGGATGACATGCCTTCTTTTTTCAGACATTACATAAGGTGAAGAGGGAGCTGAGATCTAAGATGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581885.1
CDS TCA 90 bp GCCAGTGAATCAATTACTGCTTGTACATTGTGTGCATCATCTTCTTaGCTCCTAGGAATAACTATGAGGTCTGGTACCTTTTCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: ASESITACTLCASSS*LLGITMRSGTFSPK
Trigger: TTTGGGAGAAAAGGTACCAGACCTCATAGTTATTCCTAGGAGTCAAGAAGATGATGCACACAATGTACAAGCAGTAATTGATTCACTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
ENST00000579860.5
ENST00000580188.1
ENST00000581056.5
CDS GCA 90 bp CTTTCAGTGCTGTGTCCTTGGAATGTTGCACATGCTTTCAAAGGTTaGCAGTTTTCCATAAAGTACAATTCTGTGGTTCTTACTTGGAAC +
Preference number: 5 (lower is better)
Translates to: LSVLCPWNVAHAFKG*QFSIKYNSVVLTWN
Trigger: GTTCCAAGTAAGAACCACAGAATTGTACTTTATGGAAAACTGGCAACCTTTGAAAGCATGTGCAACATTCCAAGGACACAGCACTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579637.1
CDS-3UTR CAA 90 bp GTGCAGGCTAAAGACACAAATGCACCAATTCTTCCTGTTGATGCCTCAGTAACAATTAGCATCACAGTCTaGAAGTTCATGTATTCTCAG +
Preference number: 5 (lower is better)
Translates to: VQAKDTNAPILPVDASVTISITV*KFMYSQ
Trigger: CTGAGAATACATGAACTTCAAGACTGTGATGCTAAT...TGTTACTGAGGCATCAACAGGAAGAATTGGTGCATTTGTGTCTTTAGCCTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581056.5
CDS-3UTR CAA 90 bp GATGTTTCACTGATGCGTTCTGTAAGATACTCCAACAAACCATCAAATATTTCCAAGGATGTCCTACTCTaGGACAAAACACTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: DVSLMRSVRYSNKPSNISKDVLL*DKTLGG
Trigger: CCCTCCTAGTGTTTTGTCCAAGAGTAGGACATCCTT...GGAAATATTTGATGGTTTGTTGGAGTATCTTACAGAACGCATCAGTGAAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp AATCTAGTTCAGAAAGCCGCTGAGAGAGTTTTTCTGATACATCATGTAATTCTTGGACATCTGTTTCTCTaGGCTTGCGCTGCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: NLVQKAAERVFLIHHVILGHLFL*ACAAFF
Trigger: GAAAAAGGCAGCGCAAGCCAAGAGAAACAGATGTCC...AAGAATTACATGATGTATCAGAAAAACTCTCTCAGCGGCTTTCTGAACTAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp TTGCTGCCTTTAGGCAACTTGGAAATTAAGAAAAGTCCATCATCTAGATCCCCAGATTTTCTTTTATCTTaGATTGGGTCAACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: LLPLGNLEIKKSPSSRSPDFLLS*IGSTFA
Trigger: GGCAAAGGTTGACCCAATCAAAGATAAAAGAAAATC...TGGGGATCTAGATGATGGACTTTTCTTAATTTCCAAGTTGCCTAAAGGCAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp GTCCTACTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTGATTTATCGAGCACGAACGATTaGCTGTCGATTTTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: VLLLDKTLGGYNISSCDLSSTND*LSIFFY
Trigger: ATAAAAGAAAATCGACAGCAAATCGTTCGTGCTCGA...TAAATCACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAGTAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS-3UTR CAA 90 bp CTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTGATTTAGAACTTCATTTCATTAGGACATaGAGCACTTGTAATCCCAGC +
Preference number: 5 (lower is better)
Translates to: LLDKTLGGYNISSCDLELHFIRT*STCNPS
Trigger: GCTGGGATTACAAGTGCTCAATGTCCTAATGAAATG...AAGTTCTAAATCACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577960.1
CDS-3UTR CAA 90 bp CTCTTGGACAAAACACTAGGAGGGTACAACATATCTTCATGTGATTTAGAACTTATTAGCATCACAGTCTaGAAGTTCATGTATTCTCAG +
Preference number: 5 (lower is better)
Translates to: LLDKTLGGYNISSCDLELISITV*KFMYSQ
Trigger: CTGAGAATACATGAACTTCAAGACTGTGATGCTAAT...AAGTTCTAAATCACATGAAGATATGTTGTACCCTCCTAGTGTTTTGTCCAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553956.6
ENST00000579860.5
CDS-3UTR CAA 90 bp TTTCTTAAATATCATTTCTTCCCGGGTCCTCATTCTCATCATTTTTGCACACAACTTGGAGTTTCTTCTTaGATCGATTTTCTCTACATG +
Preference number: 5 (lower is better)
Translates to: FLKYHFFPGPHSHHFCTQLGVSS*IDFLYM
Trigger: CATGTAGAGAAAATCGATCAAAGAAGAAACTCCAAG...TTGTGTGCAAAAATGATGAGAATGAGGACCCGGGAAGAAATGATATTTAAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553956.6
CDS CCA 72 bp CCGGACTCCGACGCGGCCGGGAAGGCGACGGTGTCCTaGAAGGACCGATCCACGCAGACCCGACACTGGGGC +
Preference number: 6 (lower is better)
Translates to: PDSDAAGKATVS*KDRSTQTRHWG
Trigger: GCCCCAGTGTCGGGTCTGCGTGGATCGGTCCTTCCAGGACACCGTCGCCTTCCCGGCCGCGTCGGAGTCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000556440.7
ENST00000579860.5
ENST00000580188.1
CDS CCA 72 bp GTGTCCTGGAAGGACCGATCCACGCAGACCCGACACTaGGGCGCGGACGCACGAACCAAAGCGCGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: VSWKDRSTQTRH*GADARTKARGR
Trigger: CCTTCCCCGCGCTTTGGTTCGTGCGTCCGCGCCCCAGTGTCGGGTCTGCGTGGATCGGTCCTTCCAGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579860.5
ENST00000580188.1
CDS GCA 72 bp GTTATTGGCAATGGTTACCCACTCAGCATCCGAGCCTaGCATGTTTCAGAGGCAGGTCGCCGCCGGACTCCG +
Preference number: 6 (lower is better)
Translates to: VIGNGYPLSIRA*HVSEAGRRRTP
Trigger: CGGAGTCCGGCGGCGACCTGCCTCTGAAACATGGCAGGCTCGGATGCTGAGTGGGTAACCATTGCCAATAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553412.5
ENST00000556440.7
ENST00000579860.5
ENST00000581056.5
CDS GCA 72 bp AGCTCAGCTTTCTGTCTCCTCGCAGAGCAGGGAAGGTaGCCGTTTTCTCCGGCCGTGGTGACTGCTCAGTTG +
Preference number: 6 (lower is better)
Translates to: SSAFCLLAEQGR*PFSPAVVTAQL
Trigger: CAACTGAGCAGTCACCACGGCCGGAGAAAACGGGCACCTTCCCTGCTCTGCGAGGAGACAGAAAGCTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583676.1
CDS GCA 72 bp GGTACCTTTTCTCCCAAAATAGACAGCATCCGAGCCTaGCATGTTTCAGAGGCAGGTCGCCGCCGGACTCCG +
Preference number: 6 (lower is better)
Translates to: GTFSPKIDSIRA*HVSEAGRRRTP
Trigger: CGGAGTCCGGCGGCGACCTGCCTCTGAAACATGGCAGGCTCGGATGCTGTCTATTTTGGGAGAAAAGGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580188.1
CDS GCA 72 bp GGAGTGATCATTTGGGGAGGCCACCGGAAAACACACTaGTCAAAGGGCTTGGATATGCGCACTTGTCCTCCC +
Preference number: 6 (lower is better)
Translates to: GVIIWGGHRKTH*SKGLDMRTCPP
Trigger: GGGAGGACAAGTGCGCATATCCAAGCCCTTTGAGCAGTGTGTTTTCCGGTGGCCTCCCCAAATGATCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS CAA 72 bp TGGGGAGGCCACCGGAAAACACACTGCTCAAAGGGCTaGGATATGCGCACTTGTCCTCCCTTCATCAGTGTA +
Preference number: 6 (lower is better)
Translates to: WGGHRKTHCSKG*DMRTCPPFISV
Trigger: TACACTGATGAAGGGAGGACAAGTGCGCATATCCAAGCCCTTTGAGCAGTGTGTTTTCCGGTGGCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS CCA 72 bp GAAGGACGGACGTTAAAAGAGCTTCTCGCCGCTGATTaGTCATCAGAGGAGCACTTCCTTTCACAGGACGTG +
Preference number: 6 (lower is better)
Translates to: EGRTLKELLAAD*SSEEHFLSQDV
Trigger: CACGTCCTGTGAAAGGAAGTGCTCCTCTGATGACCAATCAGCGGCGAGAAGCTCTTTTAACGTCCGTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS GCA 72 bp CTGCACCATTTTACAGCCCCAAGTTCTCCACATCCTTaGCAACACTCGTCCTCTAACTGTGGTTCTGAGTCG +
Preference number: 6 (lower is better)
Translates to: LHHFTAPSSPHP*QHSSSNCGSES
Trigger: CGACTCAGAACCACAGTTAGAGGACGAGTGTTGGCAAGGATGTGGAGAACTTGGGGCTGTAAAATGGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS CAA 90 bp GTGATCATTTGGGGAGGCCACCGGAAAACACACTGCTCAAAGGGCTaGGATATGCGCACTTGTCCTCCCTTCATCAGTGTAAATTCTGGA +
Preference number: 6 (lower is better)
Translates to: VIIWGGHRKTHCSKG*DMRTCPPFISVNSG
Trigger: TCCAGAATTTACACTGATGAAGGGAGGACAAGTGCGCATATCCAAGCCCTTTGAGCAGTGTGTTTTCCGGTGGCCTCCCCAAATGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS TCA 72 bp GAAAGAAGGACGGACGTTAAAAGAGCTTCTCGCCGCTaGTTGGTCATCAGAGGAGCACTTCCTTTCACAGGA +
Preference number: 6 (lower is better)
Translates to: ERRTDVKRASRR*LVIRGALPFTG
Trigger: TCCTGTGAAAGGAAGTGCTCCTCTGATGACCAATCAGCGGCGAGAAGCTCTTTTAACGTCCGTCCTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579860.5
CDS GCA 72 bp CATGTACATAGGGTAAGAACGCCAAGAGCAGAAACATaGCACACCTACACATGTACATCACTGAGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: HVHRVRTPRAET*HTYTCTSLRRG
Trigger: CCCCCTCCTCAGTGATGTACATGTGTAGGTGTGGCATGTTTCTGCTCTTGGCGTTCTTACCCTATGTACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS GCA 72 bp AAGGACAAGAGGAATGCAGATTCCAGCGTTCTCATCTaGCTCACTCCCCATCACGATGTCTTCAGGCAGTAT +
Preference number: 6 (lower is better)
Translates to: KDKRNADSSVLI*LTPHHDVFRQY
Trigger: ATACTGCCTGAAGACATCGTGATGGGGAGTGAGGCAGATGAGAACGCTGGAATCTGCATTCCTCTTGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581885.1
CDS GCA 72 bp CAGTGTACTTACACAAACCTAGAGAGTACAGTCCACTaGACACCGGGGCTATATGATACAGCCTATTGCTCC +
Preference number: 6 (lower is better)
Translates to: QCTYTNLESTVH*TPGLYDTAYCS
Trigger: GGAGCAATAGGCTGTATCATATAGCCCCGGTGTGCAGTGGACTGTACTCTCTAGGTTTGTGTAAGTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581885.1
CDS CAA 72 bp TTTCCTGTGCTTGGAATTGGCGGACATCTGTTTCTCTaGGCTTGCGCTGCCTTTTTCTCTCCAAGTGGAACT +
Preference number: 6 (lower is better)
Translates to: FPVLGIGGHLFL*ACAAFFSPSGT
Trigger: AGTTCCACTTGGAGAGAAAAAGGCAGCGCAAGCCAAGAGAAACAGATGTCCGCCAATTCCAAGCACAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583457.1
CDS CAA 90 bp AGGCCACCGGAAAACACACTGCTCAAAGGGCTTGGATATGCGCACTaGTCCTCCCTTCATCAGTGTAAATTCTGGATAGAAAAACTGGTT +
Preference number: 6 (lower is better)
Translates to: RPPENTLLKGLGYAH*SSLHQCKFWIEKLV
Trigger: AACCAGTTTTTCTATCCAGAATTTACACTGATGAAGGGAGGACAAGTGCGCATATCCAAGCCCTTTGAGCAGTGTGTTTTCCGGTGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS TCA 72 bp GTGAGACAAGCTGACCTGCAAGTAGTCCAAGGCCAGTaGATCAATTACTGCTTGTACATTGTGTGCATCATC +
Preference number: 6 (lower is better)
Translates to: VRQADLQVVQGQ*INYCLYIVCII
Trigger: GATGATGCACACAATGTACAAGCAGTAATTGATTCACTGGCCTTGGACTACTTGCAGGTCAGCTTGTCTCAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
ENST00000579860.5
ENST00000580188.1
ENST00000581056.5
CDS TCA 72 bp TGGATAGAAAAACTGGTTCTGACGGCGACGCATTCATaGGCTACAGACAAGTTACTTACGCTCTCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: WIEKLVLTATHS*ATDKLLTLSSK
Trigger: CTTTGAGGAGAGCGTAAGTAACTTGTCTGTAGCTCATGAATGCGTCGCCGTCAGAACCAGTTTTTCTATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS CAA 72 bp TTCTGTGGTTCTTACTTGGAACTGCTTTATTTGGCTTaGGGAGGCCACCTCTTAGACTCTGCGTTGTGGTTT +
Preference number: 6 (lower is better)
Translates to: FCGSYLELLYLA*GGHLLDSALWF
Trigger: AAACCACAACGCAGAGTCTAAGAGGTGGCCTCCCAAAGCCAAATAAAGCAGTTCCAAGTAAGAACCACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579637.1
ENST00000584857.1
CDS CAA 72 bp GTACAATTCTGTGGTTCTTACTTGGAACTGCTTTATTaGGCTTTGGGAGGCCACCTCTTAGACTCTGCGTTG +
Preference number: 6 (lower is better)
Translates to: VQFCGSYLELLY*ALGGHLLDSAL
Trigger: CAACGCAGAGTCTAAGAGGTGGCCTCCCAAAGCCAAATAAAGCAGTTCCAAGTAAGAACCACAGAATTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579637.1
ENST00000584857.1
CDS CAA 72 bp GAAAACACACTGCTCAAAGGGCTTGGATATGCGCACTaGTCCTCCCTTCATCAGTGTAAATTCTGGATAGAA +
Preference number: 6 (lower is better)
Translates to: ENTLLKGLGYAH*SSLHQCKFWIE
Trigger: TTCTATCCAGAATTTACACTGATGAAGGGAGGACAAGTGCGCATATCCAAGCCCTTTGAGCAGTGTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS TCA 72 bp TGGAGACAGAATATAGAGCTGTTATGTGAGACAAGCTaGCCTGCAAGTAGTCCAAGGCCAGTGAATCAATTA +
Preference number: 6 (lower is better)
Translates to: WRQNIELLCETS*PASSPRPVNQL
Trigger: TAATTGATTCACTGGCCTTGGACTACTTGCAGGTCAGCTTGTCTCACATAACAGCTCTATATTCTGTCTCCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553412.5
ENST00000553956.6
CDS CAA 90 bp TTCCATAAAGTACAATTCTGTGGTTCTTACTTGGAACTGCTTTATTaGGCTTTGGGAGGCCACCTCTTAGACTCTGCGTTGTGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: FHKVQFCGSYLELLY*ALGGHLLDSALWFF
Trigger: GAAAAACCACAACGCAGAGTCTAAGAGGTGGCCTCCCAAAGCCAAATAAAGCAGTTCCAAGTAAGAACCACAGAATTGTACTTTATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579637.1
ENST00000584857.1
CDS CAA 90 bp CAAAGGTTGCCAGTTTTCCATAAAGTACAATTCTGTGGTTCTTACTaGGAACTGCTTTATTTGGCTTTGGGAGGCCACCTCTTAGACTCT +
Preference number: 6 (lower is better)
Translates to: QRLPVFHKVQFCGSY*ELLYLALGGHLLDS
Trigger: AGAGTCTAAGAGGTGGCCTCCCAAAGCCAAATAAAGCAGTTCCAAGTAAGAACCACAGAATTGTACTTTATGGAAAACTGGCAACCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579637.1
ENST00000584857.1
CDS GCA 72 bp GCAGTCACCAGTCTGTACTTTCTGTCTCCATGGATTTaGATATTCTGGACACTTCCTAAAAATGGAATCATG +
Preference number: 6 (lower is better)
Translates to: AVTSLYFLSPWI*IFWTLPKNGIM
Trigger: CATGATTCCATTTTTAGGAAGTGTCCAGAATATGCAAATCCATGGAGACAGAAAGTACAGACTGGTGACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS CCA 72 bp CTCACAGCACAGCTGGACACTAGTCCTGATTTTATGTaGAATGCAAGGTCATGTTATCACACTAAATTTGTC +
Preference number: 6 (lower is better)
Translates to: LTAQLDTSPDFM*NARSCYHTKFV
Trigger: GACAAATTTAGTGTGATAACATGACCTTGCATTCCACATAAAATCAGGACTAGTGTCCAGCTGTGCTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS CCA 72 bp TCTGGACACTTCCTAAAAATGGAATCATGTAATTCGTaGCCTTTCGTATTTGGTTTCTTTCACTCCGCATGT +
Preference number: 6 (lower is better)
Translates to: SGHFLKMESCNS*PFVFGFFHSAC
Trigger: ACATGCGGAGTGAAAGAAACCAAATACGAAAGGCCACGAATTACATGATTCCATTTTTAGGAAGTGTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS TCA 72 bp TCAATTACTGCTTGTACATTGTGTGCATCATCTTCTTaGCTCCTAGGAATAACTATGAGGTCTGGTACCTTT +
Preference number: 6 (lower is better)
Translates to: SITACTLCASSS*LLGITMRSGTF
Trigger: AAAGGTACCAGACCTCATAGTTATTCCTAGGAGTCAAGAAGATGATGCACACAATGTACAAGCAGTAATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553412.5
ENST00000553956.6
ENST00000556440.7
ENST00000579860.5
ENST00000580188.1
ENST00000581056.5
CDS CCA 72 bp TTTTCTAGAGTAAATCTTCCAGGGCTGACTACATTCTaGAGTTCCTTTACGAAGCTTCTCCTCTGTATATTT +
Preference number: 6 (lower is better)
Translates to: FSRVNLPGLTTF*SSFTKLLLCIF
Trigger: AAATATACAGAGGAGAAGCTTCGTAAAGGAACTCCAGAATGTAGTCAGCCCTGGAAGATTTACTCTAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553412.5
CDS CAA 90 bp AAGTCAGACTTACCATTTCTTCCCGGGTCCTCATTCTCATCATTTTaGCACACAACTGAACTCTATAATCATCATAATATTTTCGAGCAC +
Preference number: 6 (lower is better)
Translates to: KSDLPFLPGSSFSSF*HTTELYNHHNIFEH
Trigger: GTGCTCGAAAATATTATGATGATTATAGAGTTCAGTTGTGTGCAAAAATGATGAGAATGAGGACCCGGGAAGAAATGGTAAGTCTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1
CDS CAA 72 bp ATAAAGATTTGTTTCCCATTACTGTTAACTGGCATTTaGAAGAACCTGATCAGCTCTAGGAAATATTGCCAG +
Preference number: 6 (lower is better)
Translates to: IKICFPLLLTGI*KNLISSRKYCQ
Trigger: CTGGCAATATTTCCTAGAGCTGATCAGGTTCTTCAAAATGCCAGTTAACAGTAATGGGAAACAAATCTTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582724.1
CDS GCA 72 bp TCTTTCACTCCGCATGTTTTCAAGGTTCATCTATACTaGAGTATGTATGAATACTTCATTCCTTTTTATTGC +
Preference number: 6 (lower is better)
Translates to: SFTPHVFKVHLY*SMYEYFIPFYC
Trigger: GCAATAAAAAGGAATGAAGTATTCATACATACTGCAGTATAGATGAACCTTGAAAACATGCGGAGTGAAAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580285.1
ENST00000581885.1